##maf version=1 scoring=roast.v3.3 a score=24076.000000 s hg38.chr2_KI270774v1_alt 0 3 + 223625 GAT s panTro5.chr2A 1277912 3 + 111504155 GAT i panTro5.chr2A N 0 C 0 s panPan2.chr2A 1240389 3 + 114371477 GAT i panPan2.chr2A N 0 C 0 s gorGor5.CYUI01015607v1 1267484 3 + 1464242 GAT i gorGor5.CYUI01015607v1 N 0 C 0 s nomLeu3.chr19 998110 3 + 81552678 gat i nomLeu3.chr19 N 0 C 0 s rheMac8.chr13 1343988 3 + 108979918 gat i rheMac8.chr13 N 0 C 0 s macFas5.chr13 1316242 3 - 111193037 gat i macFas5.chr13 N 0 C 0 s macNem1.NW_012011978v1 1344363 3 + 3644372 gat i macNem1.NW_012011978v1 N 0 C 0 s cerAty1.NW_012000820v1 1297226 3 - 10304083 gat i cerAty1.NW_012000820v1 N 0 C 0 s chlSab2.chr14 1367526 3 - 107702431 gat i chlSab2.chr14 N 0 C 0 s manLeu1.NW_012103754v1 844719 3 - 2200435 gat i manLeu1.NW_012103754v1 N 0 C 0 s colAng1.NW_012118821v1 1284834 3 - 13651311 gat i colAng1.NW_012118821v1 N 0 C 0 s calJac3.chr14 1299096 3 - 108792865 GAT i calJac3.chr14 N 0 C 0 s dasNov3.JH576208 1557429 3 + 4416731 GAC i dasNov3.JH576208 N 0 C 0 a score=168376.000000 s hg38.chr2_KI270774v1_alt 3 23 + 223625 CCTATGAAGTTCTAATTTTCCCA s panTro5.chr2A 1277915 23 + 111504155 CCTATGAAGTTCTAATTTTCCCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1240392 23 + 114371477 CCTATGAAGTTCTAATTTTCCCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1267487 23 + 1464242 CCTATGAAGTTCTAATTTTCCCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 998113 23 + 81552678 cctatgaagttctaattttcCCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1343991 23 + 108979918 cttatgaagttctaattttcCCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1316245 23 - 111193037 cttatgaagttctaattttcCCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1344366 23 + 3644372 cttatgaagttctaattttcCCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1297229 23 - 10304083 cttatgaagttctaattttcCCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1367529 23 - 107702431 cctatgaagttctaattttcCCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 844722 23 - 2200435 cccatgaagttctaattttcCTA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1284837 23 - 13651311 cctatgaagttctaattttcCTA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1299099 23 - 108792865 CCTGCGAAGTCATAAATTTCCCC i calJac3.chr14 C 0 C 0 s otoGar3.GL873658 880390 23 + 5252280 CCCACAGGGGTCTGAACTCCCCC i otoGar3.GL873658 N 0 C 0 s dasNov3.JH576208 1557432 23 + 4416731 CCTATGGAGTTGCACATTTCTCA i dasNov3.JH576208 C 0 C 0 a score=1087570.000000 s hg38.chr2_KI270774v1_alt 26 130 + 223625 AAACCTAGA--------GGAAACATGTGCTTTGACACTTTGGCGT-AAAATGCGGAGATTCTATTTAGCTCCTGGATTTAATA-TAAA----------GAAAAAGATGTGGCCAAGAATCTTGAGGCTAGCGTGTGGGCGGGAAATAAAC s panTro5.chr2A 1277938 130 + 111504155 AAACCTAGA--------GGAAACATGTGCTTTGACACTTTGGCAT-AAAATGCGGAGATTCTATTTAGCTCCTGGATTTAATA-TAAA----------GAAAAAGATGTGGCCAAGAATCTTGAGGCTAGTGTGTAGACGGGAAATAAAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1240415 130 + 114371477 AAACCTAGA--------GGAAACATGTGCTTTGACACTTTGGCAT-AAAATGCGGAGATTCTATTTAGCTCCTGGATTTAATA-TAAA----------GAAAAAGATGTGGCCAAGAATCTTGAGGCTAGTGTGTAGGCGGGAAATAAAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1267510 131 + 1464242 AAACCTAGA--------GGAAACATGTGCTTTGACACTTTGGCGT-AAAATGCGGAGATTCTATTTAGCTCCTGGATTTAATATTAAA----------GAAAAAGATGTGGCCAAGAATCTTAAGGCTAGCATGTGGGCGGGAAATAAAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 998136 130 + 81552678 AAACCTAGA--------GGAAACATGTGCTTTGACACTTTGGCAT-AAAATGCAGAAATTATATTTAGCTCCTGGATTTAATA-TAAA----------GAAAAAGATGTGGCCAAGAATCTTGAGGCTAGAGTGTGGGTGGGAAATAAAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1344014 131 + 108979918 AAACCTACA--------GGAAACGTGTGCTTTGACACTTTGGCATAAAAATGCGGAGATTCTATTTAGCTCCTTGATTTAATA-TAAA----------AGAAAAGATGTGGCCAAGAATCTTGAGGTTAGCATGTGGGCAGGAAATAAAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1316268 130 - 111193037 AAACCTACA--------GGAAACGTGTGCTTTGACACTTTGGCAT-AAAATGCGGAGATTCTATTTAGCTCCTTGATTTAATA-TAAA----------AGAAAAGATGTGGCCAAGAATCTTGAGGTTAGCATGTGGGCAGGAAATAAAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1344389 130 + 3644372 AAACCTACA--------GGAAACGTGTGCTTTGACACTTTGGCAT-AAAATGCGGAGATTCTATTTAGCTCCTTGATTTAATA-TAAA----------AGAAAAGATGTGGCCAAGAATCTTGAGGTTAGCATGTGGGCAGGAAATAAAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1297252 130 - 10304083 AAACCTACA--------GGAAACGTGTGCTTTGACACTTTGGCAT-AAAATGCGGAGATTCTATTTAGCTCCTTGATTTAATA-TAAA----------GGAAAAGATGTGGCCAAGAATCTTGAGGTTAGCATGTGGGCAGGAAATAAAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1367552 130 - 107702431 AAACCTACA--------GGAAATGTGTGCTTTGACACTTCGGCAT-AAAATGCAGAGGTTCTGTTTAGCTCCTGGATTTAATA-GAAA----------GGAAAAGATGTGGCCAAGAATCTTGAGGTTAGCGTGTGGGCAGGAAATAAAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 844745 130 - 2200435 AAACCTACA--------GGAAACGTGTGCTTTGACACTTTGGCAT-AAAATGCAGAGATTCTATTTAGCTCCTGGATTTAATA-TAAA----------GGAAAAGATGTGGCCAAGAATCTTGAGGTTAGCATGTGGGCAGGAAATAAAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1284860 130 - 13651311 AAACCTACA--------GGACACGTGTGCCTTGACACTTTGGCAT-AAAATGCAGAGATTCTATTTAGCTCCTGGATTTAATA-TAAA----------GGAAAAGATGTGGCTGAGAATCTTGAGGTTAGCATGTGGGCAGGAAATAAAC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1299122 129 - 108792865 AAACCTAGA--------GGAAACGTGTGTTTTGACACTTTGTCAT-AAAACGCAGAGGTTCTGTTTAGCTCCTGGATTTAATA-TAAA----------GAAAAAGATGTGGCCAAGAATCTCGAGGCTAGCGTGTGGGCA-GGAATAAAC i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1239688 130 + 1864846 AAACCTAGA--------GGAAATATGTGTTTTGACACTTTGTCAT-GAAACACAGAGATTCTGTTTAGCTCCTGGATTTAATA-TAAA----------GAAAAAGATGTGGCCAAGAATCTTGAGGCCAGCATGTGGGCAGGGAATAAAC i cebCap1.NW_016107827v1 N 0 C 0 s otoGar3.GL873658 880413 120 + 5252280 AAATCCAGAGGAAACTTGGAAACTTGGGCTTGGACACTTTGACAT-GAAAGGCAG-GGCTCTGCTCAGCCCCTGGACTCAGCC-CAGG-------------------GTGGCCAGGAGCCTGGAAGGCAGTGGACAGACAGG-------- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1557455 137 + 4416731 AAATCTAGA--------TGGAGCATATGTTTTGACACTTTACCAT-GAAATGCAAAGACTCTGTTCGGCCCTGAGATTATATA-AAAAATCAATGTAAAGAAAGAATGTTGACAGTAATTTTGAGGTTGGCGTATGGG---GAAGTAAAC i dasNov3.JH576208 C 0 C 0 a score=4546097.000000 s hg38.chr2_KI270774v1_alt 156 574 + 223625 CCGTCAATGGTCAGATGGGATAGAAATG-TTCTTGAAACTTCTTCCCTGTTTTCTGCAGCCCCTTTGTCTCTCCTGACACTTAGAGAAAAATATGTTCATTGTTTAAAAATAAAAGCTTTTAATGGAAATTTGACGTATGGCTTGCC---------------------AAAAAAAAAATTACTGTTCCCTGGTGGAATTTTCCTGGGAAGATAAATATTTATTATAATGAAGTATCTATAATTAAAGACTATCTTTTATAGAAGACATCCATTACGTCTTTCTTTGCTGCAGCCTTT-TTTATTTATGGGAGTAAGAGTTTGTAGAGTACA-TTTCATCTTTAACGTACCATAGCAAACATTAAGTGATTTTTGCAGTAGTATTAAAAGGCGATATTTTTAATTTTTAATTTTACATTTTTCAAATTGGTTCATGAAAAACTAAGGTTTAGTGTTTCACATATAGCCATAGATGGGG----TGGTGTCAGTCAGGCTTAAAGTTTTTCATTTTATCTGCACTTTCGACTATGTCTTATATAATATAGGAAGAACTGGAA--CTTTTAGTGA-TTTTTTCTGAAGTTCTCCAAGCAGAAAAAGGAA- s panTro5.chr2A 1278068 574 + 111504155 CCGTCAATGGTCAGATGGGATAGAAGTG-TTCTTGAAACTTCTTCCCTGTTTTCTGCAGCCCCTTTGCCTCTCCTGACACTTAGAGAAAAATATGTTCATTGTTTAAAAATAAAAGCTTTTAATGGAAATTTGACCTATGGCTTGCT---------------------AAAAAAAAAATTACTATTCCCTGGTGGAATTTTTCTGGGAAGATAAATATTTATTATAATGAAGTATCTATAATTAAAGACTATCTTTTATAGAAGACATCCATTACGTCTGTCTTTGCTGAAGCCTTT-TTTATTTATGGGAGTAAGAGTTTGTAGAGTACA-TTTCATCTTTAACGTACCATAGCAAACATTAAGTAATTTTTGCAGTAGTATTAAAAGGTGATGTTTTTAATTTTTAATTTTACATTTTTCAAATTGGTTCATGAAAAACTAAGGTTGAGTGTTTCACATATAGCCATAGATGGGG----TGGTATCAGTCAGGATTAAAGTTTTTCATTTTATCTGCACTTTCGACTATGTCTTATATAATATAGGAAGAACTGGAA--CTTTTAGTGA-TTTTTTCTGAAGTTCTCCAAGCAGAAAAAGGAA- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1240545 574 + 114371477 CCGTCAATGGTCAGATGGGATAGAAGTG-TTCTTGAAACTTCTTCCCTGTTTTCTGCAGCCCCTTTGCCTCTCCTGACACTTAGAGAAAAATATGTTCATTGTTTAAAAATAAAAGCTTTTAATGGAAATTTGACCTATGGCTTGCT---------------------AAAAAAAAAATTACTATTCCCTGGTGGAATTTTTCTGGGAAGATAAATATTTATTATAATGAAGTATCTATAATTAAAGACTATCTTTTATAGAAGACATCCATTACGTCTGTCTTTGCTGAAGCCTTT-TTTATTTATGGGAGTAAGAGTTTGTAGAGTACA-TTTCATCTTTAACGTACCATAGCAAACATTAAGTAATTTTTGCAGTAGTATTAAAAGGCGATGTTTTTAATTTTTAATTTTACATTTTTCATATTGGTTCATGAAAAACTAAGGTTGAGTGTTTCACATATAGCCATAGATGGGG----TGGTATCAGTCAGGATTAAAGTTTTTCATTTTATCTGCACTTTCGACTATGTCTTATATAATATAGGAAGAACTGGAA--CTTTTAGTGA-TTTTTTCTGAAGTTCTCCAAGCAGAAAAAGGAA- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1267641 571 + 1464242 CCATCAATGGTCAGATGGGATAGAAGTG-TTCTTGAAACTTCTTCCCTGTTTTCTGCAGCCCCTTTGCCTCTCCTGACACTTAGAGAAAAATATGTTCATTGTTTAAAAATAAAAGCTTTTAATGGAAATTTGACCTATGGCTTGCT---------------------AAAAAAAAAATTACTGTTCCCTGGTGGAATTTTTCTGGGAAG----ATATTTATTATAATGAAGTATCTATAATTAAAGACTATCTTTTATAGAAGACATCCATTAAGTCTTTCTTTGCTGCAGCCTTT-TTTATTTATGGGAGTAAGAGTTTGTAGAGTACA-TTTCATCTTTAACGTACCATAGCAAACATTAAGTAATTTTTGCAGTAGTATTAAAAGGCGATATTTTTAATTTTTAATTTTACATTTTTCAAATTGGTTCATGAAAAACTAAGGTTTAGTGTTTCACATATAGCCATAGATGGGG----TGGTATCAGTCAGGATTAAAGTTTTTCATTTTATCTGCACTTTCGACTATGTCTTATATAATATAGGAAGAACTGGAA--CTTTTAGTGGTTTTTTTCTGAAGTTCTCCAAGCAGAAAAAGGAG- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 998266 574 + 81552678 CCGTCAATGGTCAGATGGGATAGAGGTG-TTCTTGAAACTTCTTCCCTGTTTTCTGCAGCCCCTTTGCCTCTCCTGACACTCAGAGAAAAATATGTTCATTGTTTAAAAATAAAAGCTTTTAATTGAAATTCAACCTATGGCTTGCT---------------------AAAAAAAAAAATACTGTTCCCTGGTGGAATTTTTCTGGGAAGATAAAGATTTATTATAATGAAGTGTCTATAATTAAAGACTATCTTTTATAGAAGACATCCATTAAGTCTTTCTTTGCTGTAGCCTTT-TTTATTTATGAGAGTAAGAGTTTGTAGAGTACA-TTTCATCTTTAACGTACCTTAGCAAACATTAAGTAATTTTTGCAGTAGTATTAAAAAGCGATATTTTTAATTTTTAATTTTACATTTTTCAAATTGGTTCATGAAAAACTAAAGTTTAGTGTTTCACATATAGCCATAGATGGGG----TGGTATCAGTCAGGATTAAAGTTTTTGATTTTATCTGCACATTCAACTATGTCTTATATAATATAGGAAGAACTGGAA--CTTTTAGTGA-TTTTTTCTAAAGTTCTCCAAGCAGAAAAAGGAG- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1344145 573 + 108979918 CCGTCAATGGTCAGATGGGATAAAAGTG-TTCTTGAAACTTTTTCCCTGTTTTCTGCAGCCCCTTTCCCTCTCCTGACACTTAGAGGAAAATATGTTCTTTGTTTAAAAATAAAAGCTTTTAATGGAAATTCGACCTATGGCTTGCT----------------------AAAAAAAAATTACTGTTCCCTGGTGGAATTTTTCTGGGAAGATAAAGATTTATTATAATGAAGTATGTATAATTAAAGACTACCTTTTATAGAAGACATCCATTAAGTCTTTCTTTGCTGCAGCCTTT-TTTATTTATGGGAGTAAGAGTGTGTAGAGTACA-TTTCATCTTTAAAGTACCTTAGCAAACATTAAGTAATTTTTGCAGTAGTATTAAAAGGCAATATTTTTAATTTTTAATTTTACATTTCTCAAATTGGTTCATGAAAAACTAAGGTTTAGTGGTTCACATATAGCCATAGATGGGG----TGGTATCAGTCAGGATTAAAGGTTTTCATTTTTTCTGCACTCTTGACTATGTCTTATATAATATAGGAAGAACTGGAA--CTTTTAGTGA-ATTTTTCTGAAGTTCTCCAAGCAGAAAAAGGAG- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1316398 573 - 111193037 CCGTCAATGGTCAGATGGGATAAAAGTG-TTCTTGAAACTTTTTCCCTGTTTTCTGCAGCCCCTTTCCCTCTCCTGACACTTAGAGGAAAATATGTTCTTTGTTTAAAAATAAAAGCTTTTAATGGAAATTCGACCTATGGCTTGCT----------------------AAAAAAAAATTACTGTTCCCTGGTGGAATTTTTCTGGGAAGATAAAGATTTATTATAATGAAGTATGTATAATTAAAGACTACCTTTTATAGAAGACATCCATTAAGTCTTTCTTTGCTGCAGCCTTT-TTTATTTATGGGAGTAAGAGTGTGTAGAGTACA-TTTCATCTTTAAAGTACCTTAGCAAACATTAAGTAATTTTTGCAGTAGTATTAAAAGGCAATATTTTTAATTTTTAATTTTACATTTCTCAAATTGGTTCATGAAAAACTAAGGTTTAGTGGTTCACATATAGCCATAGATGGGG----TGGTATCAGTCAGGATTAAAGGTTTTCATTTTTTCTGCACTCTTGACTATGTCTTATATAATATAGGAAGAACTGGAA--CTTTTAGTGA-ATTTTTCTGAAGTTCTCCAAGCAGAAAAAGGAG- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1344519 572 + 3644372 CCGTCAATGGTCAGATGGGATAAAAGTG-TTCTTGAAACTTTTTCCCTGTTTTCTGCAGCCCCTTTCCCTCTCCTGACACTTAGAGGAAAATATGTTCTTTGTTTAAAAATAAAAGCTTTTAATGGAAATTCGACCTATGGCTTGCT----------------------AAAAAAAAATTACTGTTCCCTGGTGGAATTTTTCTGGGAAGATAAAGATTTATTATAATGAAGTATGTATAATTAAAGACTACCTTTTATAGAAGACATCCATTAAGTCTTTCTTTGCTGCAGCCTTT-TTTATTTATGGGAGTAAGAGTGTGTAGAGTACA-TTTCATCTTTAAAGTACCTTAGCAAAC-TTAAGTAATTTTTGCAGTAGTATTAAAAGGCAATATTTTTAATTTTTAATTTTACATTTCTCAAATTGGTTCATGAAAAACTAAGGTTTAGTGGTTCACATATAGCCATAGATGGGG----TGGTATCAGTCAGGATTAAAGGTTTTCATTTTTTCTGCACTCTTGACTATGTCTTATATAATATAGGAAGAACTGGAA--CTTTTAGTGA-ATTTTTCTGAAGTTCTCCAAGCAGAAAAAGGAG- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1297382 594 - 10304083 CCGTCAATGGTCAGATGGGATAAAAGTG-TTCTTGAAACTTTTTCCCTGTTTTCTGCAGCCCCTTTCCCTCTCCTGACACTTAGAGAAAAATATGTTCTTTGTTTAAAAATAAAAGCTTTTAATGGAAATTCGACCTATGGCTTGCTaaaaacaaacaaacaaacaaaaaaaaaaaaaTTACTGTTCCCTGGTGGAATTTTTCTGGGAAGATAAAGATTTATTATAATGAAGTATGTATAATTAAAGACTACCCTTTATAGAAGACATCCATTAAGTCTTTC-TTGCTGCAGCCTTT-TTTATTTATGGGAGTAAGAGTTTGTAGAGTACA-TTTCATCTTTAAAGTACCTTAGCAAACATTAAGTAATTTTTGCAGTAGTATTAAAAGGCAATATTTTTAATTTTTAATTTTACATTTCTCAAACTGGTTCACGAAAAACTAAGGTTTAGTGGTTCACATACAGCCATAGATGGGG----TGGTGTCAGTCAGGATTAAAGTTTTTCATTTTGTCTGCACTCTCGACTATGTCTTATATAATATAGGAAGAACTGGAA--CTTTTAGTGA-ATTTTTCTGAAGTTCTCCAAGCAGAAAAAGAAG- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1367682 579 - 107702431 CCGTCAATGGTCAGATGGGATAAAAGTG-TTCTTGAAACTTTTTCCCTGTTTTCTGCAGCCGCTTTCCCTCTCCTGACACTTAGAGGAAAATATGTTCTTTGTTTAAAAATAAAAGCTTTTAATGGAAATTCGACCTATGGCTTGCT----------------TAAAAACAAAAAAAATTACTGTTCCCTGGTGGAATTTTTCTGGGAAGATAAAGATTTATTATAATGAAGTATGTATAATTAAAGACTACCTTTTATAGAAGACATCCATTAAGTCTTTCTTTGCTGCAGCCTTT-TTTATTTATGGGAGTAAGAGTTTGTAGAGTACA-TTTCATCTTTAAAGTACCTTAGCAAACATTAAGTAATTTTTGCAGTACTATTAAAAGGCAGTATTTTTAATTTTTAATTTTACATTTCTCAAATTGGTTCATGAAAAACTAAGGTTTAGCGGTTCACATATAGCCATAGATGGGG----TGGTATCAGTCAGAATTAAAGGTTTTCATTTTGTCTGTACTCTCGACTATGTCTTATATAATATAGGAAGAACTGGAA--CTTTTAGTGA-ATTTTTCTGAAGTTCTCCAAGCAGAAAAAGGAG- i chlSab2.chr14 C 0 I 217 s manLeu1.NW_012103754v1 844875 588 - 2200435 CCGTCAATGGTCAGATGGGATAAAAGTG-TTCTTGAAACTTTTTCCCTGTTTTCTGCAGCCCCTTTCCCTCTCCTGATACTTAGAGAAAAATATGTTCTTTGTTTAAAAACAAAAGCTTTTAATGGAAATTCGACCTATGGCTTGCT------aaaaaaaaaaaaaaaaaaaaaaaaaTTACTCTTCCCTGGTGGAATTTTTCTGGGAAGATAAAGATTTATTATAATGAAGTATGTATAATTAAAGACTACCCTTTATAGAAGACATCCATTAAGTCTTTC-TTGCTGCAGCCTTT-TTTATTTATGGGAGTAAGAGTGTGTAGAGTACA-TTTCATCTTTAAAGTACCTTAGCAAACATTAAGTAATTTTTGCAGTAGTATTAAAAGGCAATATTTTTAATTTTTAATTTTACATTTCTCAAATTGGTTCATGAAAAACTAAGGCTTAGTGGTTCACATATAGCCGTAGATGGGG----TGGTGTCAGTCAGGATTACAGTTTTTCATTTTGTCTGCACTCTCGACTATGTCTTACATAATATAGGAAGAACTGGAA--CTTTTAGTGA-ATTTTTCTGAAGTTCTCCAAGCAGAAAAAGGAG- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1284990 585 - 13651311 CCATCAGTGGTCAGATGGGATAAAAGTG-TTCTTGAAACTTTTTCCCTGTTTTCTGCAGCCCCTTTCCCTCTCCTGACGCTTAGAGAAAAAGATGTTCTTTGTTTAAAAATAAAAGCTTCTAATGGAAATTCAACCTATGGCTTGCT----------aaaaaaaaaaaaaaaaaaaaaTTACTGTTCCCTGGTGGAATTTTTCTGGGAAGATAAAGATTTATTATAATGAAGTATGTATAATTAAAGACTGCCTTTTATAGAAGACATCCATTAAGTCTTTCTTTGCTGCAGCCTTT-TTTATTTATGGGAGTTAGAGTTTGTAGAGTATA-TTTCATCTTTAAAGTACCTTAGCAAACATTAAGTAATTTTTGCAGTAGTATTAAAAGGCAATATTTTTAATTTTTAATTTTACATTTCTCAAATTGGTTCATGAAAAACTAAGGTTTAGTGGTTCACATATAGCCATAGATGGGG----TGGTATCAGTCAGGATTAAAGTTTTTCATTTTGTCTGCACTCTCGACTATGTCTTATATAATATAGGAAGAACTGGAA--CTTATAGTGA-ATTTTTCCGAAGTTCTCCAAGCAGAAAAAGGAG- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1299251 568 - 108792865 CTGTCAGC-GTCAGATGTGATGAAAGTG-TTTTTGAACCTCCTTCCGTGTTTTCTGCAGCCCCTCTGCCTGTCCTGTCACATAGAGAAAAATATGTTCATTGTTTAAAAATAAAAGGTTTTAATGGAAATTCAACCTATAGCTTGCT-----------------------AAGGT--TCCACTGTTCCCTAGTGGAATTTTTCT-GGAAGATACAGTTTTACTATATTGAAGTATCTATAATTAAAGGCTGTCTTTTACAGAAGACGTCCACTAAGTCTTTCTTTGCTGCAGCCTTTGTTTTTTTTTGGGAGTAACAGTTTGTAGAGTACA-TTTCATCTTTAAAGTGCCTTAGCAAACATTAAGCAATTTTTGCAATAGTATGAAAAGGTGCTATTTTTAATTTTTAATTTCACATTTTTCAAATTGGTTCATG-ATCACTAAGGTTTAGTGATCCATATATAGCCATAGACGGGG----TGGTATCAGTCAGGATTAAAGTTTTTCATTTTATCTGCACTCTTGACTATGTCTTATATAATATAAAAAGAACTGGAC--CTTTTAGTGA-ATTTTTTTGAAGTTCTCCAAGCAGAAAAAGGAG- i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1239818 569 + 1864846 CTGTCAGT-GTCAGGTGTGATAAAAGTG-TTTTTGAAACTCCTTCCCTGTTTTCTGCAGCCCCTTTGCCTGTCCTGTCACATAGAGAAAAATATGTGCATTGTTTAAAAATAGAAGCTTTTAATGGAAATTCGACCTATAGCTTGCT-----------------------AAGAGAAACTGCTGTTCCCTAGTGGAATTTTCCT-GGAAGATAAACTTTTACTATATTGAAGTATCTATAATTAAAGACTGCCTTTTACAGAAGACATCCATTAAGTCTTTCTTCGCTGCAGCCTTT-TTTTTTAATGGGAGTAACAGTTTGTAGAGTACA-TTTCATCTTTAAAATTCCTTAGCAAACATTAAGCAATTTTTGCAGTAGTATGAAAAGGTGATATTTTTAATTTTTAATTTCACATTTTTCAAATTGGTTCATG-ATCACTAAGGTTCAGTGATTCATATATAGCCATAGATGGGG----TGGTATCAGTCAGGATTAAAGTTTTTCATTTTATCTGCACTCTTGACTATGTCTTATACAATATAAAAAGAACTGGAC--CTTTTAGTGA-ATTTTTTTGAAGTTCTCCAAGCAGAAAAAGGAG- i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 880533 524 + 5252280 -CTCCACTTGACAGATAGGATGACAGTGCCTCCAGACAC-----CCACATTTTCC-CAGCCTCT----CTCCTCTGACACTTGGAGGAAAATATGTTTGTTATTTAAAAATAAATGCTTCTAATAGAAATT---------------T----------------------AAGAAATTATTGCTGTTTCCTATTGGGATTTTTCTGGGAAGATGAAGACTTGTTATAATGAAGCATCCATAATTAAA-ACGATCTTTCATAAAAGACAGCCATTAAGTCTTTATTTACTGCAGCCTTT-TCTA------AAATTAAGAATTAATCGTATACATTTTTATCTTTAATGTGCCTTAACAAACATTAAGTACTTTT----GCAGTATTATAAGGTAGTAGT------------ATCTACATTTTTCAAGTAGGTTCAGGAGAAACTAAGGGTAAGTGATTGGCACATAGCCACAGGCAGGGTCACTGGTATCAGC----ACTAGTGTTTCGA----TGTGGGCACTTCCTGCTATGCCTGGTATACTACAGGAAGTACTGGAATTCCTGTGGTGG-AATTTT-TATAGTACTCCAAGCAGAAAAAAGCAG i otoGar3.GL873658 C 0 C 0 e dasNov3.JH576208 1557592 0 + 4416731 C a score=301332.000000 s hg38.chr2_KI270774v1_alt 730 41 + 223625 CAATGCTCATAGGATGTTTTAAGGCTGTGTACAGGAAAACA s panTro5.chr2A 1278642 41 + 111504155 CAATGCTCATAGGATGTTTTAAGGCTGTGTACAGGAAAACA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1241119 41 + 114371477 CAATGCTCATAGGATGTTTTAAGGCTGTGTACAGGAAAACA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1268212 41 + 1464242 CAATGCTCATAGGATGTTTTAAGGCTGTGTACAGGAAAACA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 998840 41 + 81552678 CAATGCTCATAGGATGTTTTAAGGCTGTGTACAGGAAAATG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1344718 41 + 108979918 CAATGCTCATAAGATGTTTTAAGGCTGTGTACAGGAAAACG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1316971 41 - 111193037 CAATGCTCATAAGATGTTTTAAGGCTGTGTACAGGAAAACG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1345091 41 + 3644372 CAATGCTCATAAGATGTTTTAAGGCTGTGTACAGGAAAACG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1297976 41 - 10304083 CAATGCTCATAAGATGATTTAAAGCTGTGTACAGGAAAACG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1368478 41 - 107702431 CAATGCTCATAAGATGTTTTAAGACTGTGTATAGGAAAACG i chlSab2.chr14 I 217 C 0 s manLeu1.NW_012103754v1 845463 41 - 2200435 CAATGCTCATAAGATGTTTTAAGGCTGTGTACAGGAAAACG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1285575 41 - 13651311 CAATGCTCATAAGATGTTTTAACGCTGTGTACAGGAAAACG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1299819 40 - 108792865 CAATGCTCATAGGATGATTTTAGGCTGCGTG-AGGAAAACG i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1240387 41 + 1864846 CACTGCTCATAGCATGATTTTAGGCTGTGTACAGGAAAACG i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 881057 19 + 5252280 CAGTGA----------------------GCACAGGAAACCC i otoGar3.GL873658 C 0 C 0 e dasNov3.JH576208 1557592 0 + 4416731 C a score=474591.000000 s hg38.chr2_KI270774v1_alt 771 67 + 223625 CAAG-GGAAGACCAGAGGGGTCGACT---------GC-AGGTG-ACATGGGACTG------AGGACCGTGGATGCTGATGCATCC s panTro5.chr2A 1278683 67 + 111504155 CAAG-GGAAGACCAGAGGAGTCGACT---------GC-AGGTG-ACGTGCGACTG------AGGACCGTGGATGCTGATGCATCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1241160 67 + 114371477 CAAG-GGAAGACCAGAGGAGTCGACT---------GC-AGGTG-ACGTGCGACTG------AGGACCGTGGATGCTGATGCATCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1268253 67 + 1464242 CAAG-GGAAGACCAGAGGGGTCGACT---------GC-AGGTG-ACGTGGGACTG------AGGACCGTGGATGCTGATGCATCC i gorGor5.CYUI01015607v1 C 0 I 132 s nomLeu3.chr19 998881 67 + 81552678 CAAG-GGAAGACCAGAGGGGGCCACT---------GC-GGGCG-ACATGGGACTG------AGGACCATGGATGCTCATGCATCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1344759 67 + 108979918 CAAG-GGAAGTCCAGAGGGGGCCACT---------GC-GGGCG-ACAAGGGACTG------AGGACGGTGGATGCTGATGCATCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1317012 67 - 111193037 CAAG-GGAAGACCAGAGGGGGCCACT---------GC-GGGCG-ACAAGGGACTG------AGGACGGTGGATGCTGATGCATCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1345132 67 + 3644372 CAAG-GGAAGACCAGTGGGGGCCACT---------GT-GGGCG-ACAAGGGACTG------AGGACGGTGGATGCTGATGCATCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1298017 67 - 10304083 CAAG-GGAGGACCAGAGGGGGCCACT---------GC-AGGCG-ACGTGGGGCTG------AGGACGGTGGATGCTGATGCATCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1368519 67 - 107702431 CAAG-GGAAGACCAGAGGGGGCCACT---------GC-GGGCG-ACATGGGACTG------AGGACGGTGGATGCTGCTGCATCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 845504 67 - 2200435 CAAG-GGAAGACCAGAGGGGGCCACT---------GC-GGGTG-ACGTGGGACTG------AGGACGGTGGATGCTGATGCATCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1285616 67 - 13651311 CAAG-GGAGGACCAGAGGGGGCCACT---------GC-GGGCG-ACGTGGGACTG------AGGATGGTGGATGCTGATGCATCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1299859 68 - 108792865 CAAG-GGAAGACCAGAGGGGGCCCCT---------GTGGGGTGGACGTGCGACTG------AGGACCGTGGA-GCGGATGCGTCC i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1240428 60 + 1864846 CAAG-GGAAGACCAGA-GGGGCCACT---------GCAGGGTG-------GACTG------AGGACCGTGGA-GCTGGTGCGTCC i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 881076 75 + 5252280 CAAG-AGAAATCCAGACAGGGCCAGCAGGGCAGAAGC-AGGGC-AGAGGAGATCA------AAGACAGTGG-TGCAGATGTGTCC i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1557592 71 + 4416731 CAAGTAGAAAACCAGAGAGGGTCAGT---------AA-GGGTGGAAGTGGGATTGAATGCCAAGACAATGGAAGCGCATGT---- i dasNov3.JH576208 C 0 C 0 a score=92765.000000 s hg38.chr2_KI270774v1_alt 838 21 + 223625 ---CCAAGACATG---TGGGGCAGCTA s panTro5.chr2A 1278750 21 + 111504155 ---CCAAGACATG---TGGGGCAGCTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1241227 21 + 114371477 ---CCAAGACATG---TGGGGCAGCTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1268452 21 + 1464242 ---CCAAGACATG---TGGGGCAGCTA i gorGor5.CYUI01015607v1 I 132 C 0 s nomLeu3.chr19 998948 21 + 81552678 ---TCAAGACATG---CGGGGCAGCTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1344826 21 + 108979918 ---TCAAGACATG---CGGAGCAGCTA i rheMac8.chr13 C 0 I 185 s macFas5.chr13 1317079 21 - 111193037 ---TCAAGACATG---CGGAGCAGCTA i macFas5.chr13 C 0 I 111 s macNem1.NW_012011978v1 1345199 21 + 3644372 ---TCAAGACATG---CGGAGCAGCTA i macNem1.NW_012011978v1 C 0 I 111 s cerAty1.NW_012000820v1 1298084 21 - 10304083 ---TCAACACATG---CGGAGCAGCTA i cerAty1.NW_012000820v1 C 0 I 74 s chlSab2.chr14 1368586 21 - 107702431 ---TCAACACATG---TGGAGCAGCTA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 845571 21 - 2200435 ---TCAACACATG---AGGAGCAGCTG i manLeu1.NW_012103754v1 C 0 I 154 s colAng1.NW_012118821v1 1285683 21 - 13651311 ---TCAAGACATG---TGGAGCAGCTA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1299927 17 - 108792865 ---TCAGGAT-------CGGGCAGCTG i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1240488 18 + 1864846 ---TCAGGATG------CGGGCGGCTG i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 881151 23 + 5252280 ----TGACCCCTGACTCCAGGTGGCCT i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1557663 21 + 4416731 CACTGATAGCATG------GGAAGCCA i dasNov3.JH576208 C 0 C 0 a score=3583279.000000 s hg38.chr2_KI270774v1_alt 859 441 + 223625 -CTGGAGGCTGGACTGTGGGGCGGGAGAGTTGAGTGGG-------------------------------------CTGGAGGAGGTCAGTTTGCAAAGATTGAAGAATGAGAAAGTAG--AGACT--GACAAATCATCACATGCTAAACGTCGATTTAAACATTAAGTGAATGTCT--GTTGATTTAACGAGGCTGTTTAATGTAGTAACAGATGCTAATTAAATAAATGAGCTCTTGTT----TAGAAATCGCTAATTAATTTTATTCCTTTACAGAATGTGCTCTGGAGATTTAAATTTTCCCAGCTTAAGGGATCTTCAGATGATGGGAAAACTCGAGT-AAAGCTGCTGTTTCAGAATCTGGACACCAAACAGATTGAGATGAAGGTATGCGGCATGGGGCATGGGTTATTCTGCC-A-----------------------------------------CCACCCACACATAAAGTACAGCT-CAGAGGGTCCGCTGGTAAAAATCTCCACCCCTCCCATGCACACAAA s panTro5.chr2A 1278771 441 + 111504155 -CTGGAGGCTGGACTGTGGGGCAGGAGAGTTGAGTGGG-------------------------------------CTGGAGGAGGTCAGTTTGCAAAGATTGAAGAATGAGAAAGTGG--AGACT--GACAAATCATCACACGCTAAACGTCGATTTAAACATTAAGTGAATGTCT--GTTGATTTAACGAGGCTGTTTAATGTAGTAACAGATGCTAATTAAATAAATGAGCTCTTGTT----TAGAAATTGCTAATTAATTTTATTCCTTTACAGAATGTGCTCTGGAGATTTAAATTTTCCCAGCTTAAGGGATCTTCAGATGATGGGAAAACTCGAGT-AAAGCTGCTGTTTCAGAATCTGGACACCAAACAGATTGAGACGAAGGTAAGGGGCATGGGGCATGGGTTATTCTGCC-A-----------------------------------------CCACCCACACATAAAGTATGGCT-CAGATGGTCCGCTGGTAAAAATCTCCACCTCTCCCATGCACACAAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1241248 441 + 114371477 -CTGGAGGCTGGACTGTGGGGCAGGAGAGTTGAGTGGG-------------------------------------CTGGAGGAGGTCAGTTTGCAAAGATTGAAGAATGAGAAAGTGG--AGACT--GACAAATCATCACACGCTAAACGTCGATTTAAACATTAAGTGAATGTCT--GTTGATTTAACGAGGCTGTTTAATGTAGTAACAGATGCTAATTAAATAAATGAGCTCTTGTT----TAGAAATTGCTAATTAATTTTATTCCTTTACAGAATGTGCTCTGGAGATTTAAATTTTCCCAGCTTAAGGGATCTTCAGATGATGGGAAAACTCGAGT-AAAGCTGCTGTTTCAGAATCTGGACACCAAACAGATTGAGACGAAGGTAAGGGGCATGGGGCATGGGTTATTCTGCC-A-----------------------------------------CCACCCACACATAAAGTATGGCT-CAGATGGTCCGCTGGTAAAAATCTCCACCTCTCCCATGCACACAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1268473 442 + 1464242 -CTGGAGGCTGGACCGTGGGGCAGGAGAGTTGAGTGGG-------------------------------------CTGGAAGAGGTCAGTTTGCAAAGACTGAAGAATGAGAAAGTAG--AGGCC--GACAAATCGTCACACGCTAAATGTCGATTTAAACATTAAGTGAATGTCT--GTTGATTTAACGAGGCTGTTTAATGTAGTAACAGATGCTAATTAAATAAATGAGCTCTTGTT----TATAAATTGCTAATTAATTTTATTCCTTTACAGAATGTGCTCTGGAGATTTAAATTTTCCCAGCTTAAGGGATCTTCAGATGATGGGAAAACTCGAGTAAAAGCTGCTGTTTCAGAATCTGGACACCAAACAGATTGAGACGAAGGTATGGGGCATGGGGCATGGGTTATTCTGCC-A-----------------------------------------CCACCCACACATAAAGTACAGCT-CAGATGGTCCGCTGGTAAAAATCTCCACCCCTCCCATGCACACAAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 998969 441 + 81552678 -TTGGGGGCTGGACTGTGGGGCAGGAGAGCTGAGTGGG-------------------------------------CTGGAGGAGGCCAGTTTGCAAAGACTGAAGAGCGAGAAAGTGG--GGACT--GACAAATCATCACATGCTAAACATCGATTTAAACATTAAGTGAATGTCT--GTTGATTTAACGAGGCTGTTTAATGTAGTAAGAGATGCTAATTAAATAAATGAGCTCTTGTT----TATAAATCACTAATTAATTTTATTCCTTTACAGAATGTGCTCTGGAGATTTAAATTTTCCCAGCTTAAGGGATCTTCAGATGATGGGAAAACTCGAGT-AAAGCTGCTGTTTCAGAATCTGGACACCAAACAGATTGAGACGAAGGTATGGGGCATGGGGCATGGGTTATTCTGCC-A----------------------------------------CCCACCCACACATAAAGTA-AGCT-CAGATGGTCTGCTGGTAAAAATCTCCACCCCTCCCATGCACACAAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1345032 435 + 108979918 -CTGGAGGCTGGACCGTGGGGCAGGAGAGCTGAGTGGG-------------------------------------CTGGAGGAAGCCAGTTTGCAAAGATTGAAGAGTGAGAAAGTAG--AGACT--GACAAATCATTACATGCTAAATATCGATTTAAACATTATGTGAATGTCT--GTTGATGTAACAAGGCTGTTTAATGTAGTAAGAGATGCTAATTAAATAAATGAACTCTTGTT----TATAAATCACTAATTAATTTTATTCCTTTACAGAATGTGCTCTGGAGATTTAAATTCTCTCAGCTTAAGGGATCTTCAGATGATGGGAAAACTCGAGT-AAAGCTGCTGTTTCAGAATCTGGACACCAAACAGATTGAGACGAAGGTATGGGG-------TATGGGTTATTCTGCC-A----------------------------------------CCCACCCACACATAAAGTACAGCT-CAGATGGTCCGCTGGTAAAAGCCTCCATCCTTCCCATGCACACATA i rheMac8.chr13 I 185 C 0 s macFas5.chr13 1317211 435 - 111193037 -CTGGAGGCTGGACCGTGGGGCAGGAGAGCTGGGTGGG-------------------------------------CTGGAGGAAGCCAGTTTGCAAAGATTGAAGAGTGAGAAAGTAG--AGACT--GACAGATCATTACATGCTAAATATCGATTTAAACATTATGTGAATGTCT--GTTGATGTAACAAGGCTGTTTAATGTAGTAAGAGATGCTAATTAAATAAATGAACTCTTGTT----TATAAATCACTAATTAATTTTATTCCTTTACAGAATGTGCTCTGGAGATTTAAATTCTCTCAGCTTAAGGGATCTTCAGATGATGGGAAAACTCGAGT-AAAGCTGCTGTTTCAGAATCTGGACACCAAACAGATTGAGACGAAGGTATGGGG-------TATGGGTTATTCTGCC-A----------------------------------------CCCACCCACACATAAAGTACAGCT-CAGATGGTCCGCTGGTAAAAGCCTCCATCCTTCCCATGCACACATA i macFas5.chr13 I 111 C 0 s macNem1.NW_012011978v1 1345331 435 + 3644372 -CTGGAGGCTGGACCGTGGGGCAGGAGAGCTGGGTGGG-------------------------------------CTGGAGGAAGCCAGTTTGCAAAGATTGAAGAGTGAGAAAGTAG--AGACT--GACAAATCATTACATGCTAAATATCGATTTAAACATTATGTGAATGTCT--GTTGATGTAACAAGGCTGTTTAATGTAGTAAGAGATGCTAATTAAATAAATGAACTCTTGTT----TATAAATCACTAATTAATTTTATTCCTTTACAGAATGTGCTCTGGAGATTTAAATTCTCTCAGCTTAAGGGATCTTCAGATGATGGGAAAACTCGAGT-AAAGCTGCTGTTTCAGAATCTGGACACCAAACAGATTGAGACGAAGGTATGGGG-------TATGGGTTATTCTGCC-A----------------------------------------CCCACCCACACATAAAGTACAGCT-CAGATGGTCCGCTGGTAAAAGCCTCCATCCTTCCCATGCACACATA i macNem1.NW_012011978v1 I 111 C 0 s cerAty1.NW_012000820v1 1298179 435 - 10304083 -CTGGAGGCTGGACCGTGGGGCAGGAGAGCTGGGTGGG-------------------------------------CTGGAGGAAGCCAGTTTGCAAAGATTGAAGAGTGAGAAAGTAG--AGACT--GGCAAATCATCACATGCTAAATGTCGATTTAAACGTTATGTGAATGTCT--GTTGATGTAACAAGGCTGTTTAATGTAGTAAGAGATGCTAATTAAATAAATGAACTCTTGTT----TATAAATCACTAATTAATTTTATTCCTTTACAGAATGTGCTCTGGAGATTTAAATTCTCTCAGCTTAAGGGATCTTCAGATGATGGGAAAACTCGAGT-AAAGCTGCTGTTTCAGAATCTGGACACCAAACAGATTGAGACGAAGGTATGGGG-------CATGGGTTATTCTGCC-A----------------------------------------CCCACCCACACATAAAGTACAGCT-CAGATGGTCTGCTGGTAAAAGTCTCCATCCTTCCCATGCACACATA i cerAty1.NW_012000820v1 I 74 C 0 s chlSab2.chr14 1368607 423 - 107702431 -CTGGAGGCTGGACCGTGGGGCAGGAGAGCTGGGTGGG-------------------------------------CTGGAGGACGCCAGTTTGC---------AGAGTGAGAAAGTAG--AGACT--GACAAATCATTACATGCTAAATGTCAATTTAAACATTATGTGAATGTCT--ATTGATTTAACAAGTATGTTTAATGT------AGATGCTAATTAAATAAATGAACTCTTGTT----TATAAATCAC----TAATTTTATTCCTTTACAGAATGTGCTCTGGAGATTTAAATTCTCTCAGCTTAAGGGATCTTCAGATGATGGGAAAACTCGAGT-AAAGCTGCTGTTTCAGAATCTGGACACCAAACAGATTGAGACGAAGGTATGGGGCATGGGGCATGGGTTATTCTGCC-A----------------------------------------CCCACCCACACATAAAGTACAGCT-CAGATGGTCCGCTGGTAAAAGTCTCCATCCTTCCCATGCACACATA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 845746 442 - 2200435 -ctggaggctggaccgtggggcaggagagctgggtggg-------------------------------------ctggaggAAGCCAGTTTGCAAAGATTGAAGAGTGAGAAAGTAG--AGACT--GACAAATCATTACATGCTAAATATCGATTTAAACATTATGTGAATGTCT--GTTGGTTTAACAAGGCTGTTTAATGTAGTAAGAGATGCTAATTAAATAAATGAACTCTTGTT----TATAAATCACTAATTAATTTTATTCCTTTACAGAATGTGCTCTGGAGATTTAAATTCTCTCAGCTTAAGGGATCTTCAGATGATGGGAAAACTCGAGT-AAAGCTGCTGTTTCAGAATCTGGACACCAAACAGATTGAGACGAAGGTATGGGGCATGGGACATGGGTTATTCTGCC-A----------------------------------------CCCACCCACACATAAAGTACAGCT-CAGATGGTCTGCTGGTAAAAATCTCCATCCTTCCCATACACACGTA i manLeu1.NW_012103754v1 I 154 C 0 s colAng1.NW_012118821v1 1285704 437 - 13651311 -CTGGAGGCTGGACTGTGGGGCAGGAGAGCTGGGTGGG-------------------------------------CTGGAGGAAGCCAGTTTGCAAAGATTGAAGAGTGAGAAAGTAG--AGACT--GACAAATCATCACATGCTAAATGTCAATTTAAACATTTTGTGAATGTCT--GTTGATTTAACAAGGCTGTTTAATGTAGTAAGAGATGCTAATT-----AATGAACTCTTGTT----TATAAATCACTAATTAATTTTATTCCTTTACAGAATGTGCTCTGGAGATTTAAATTCTCTCAGCTTAAGGGATCTTCAGATGATGGGAAAACTCGAGT-AAAGCTGCTGTTTCAGAATCTAGACACCAAACAGATTGAGACGAAGGTATGGGGCATGGGGCATGGGTTATTCTGCC-A----------------------------------------CCCACCCACACATAAAGTACAGCT-CAGACGGTCTGCTGGTAAAAATCTCCATCCTTCCCATGCACACATA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1299944 513 - 108792865 -CTGGAGGCTGGGCTGTGGGGCAGCAGAGCTGCGTGGGCTGGAGGCTGGGCTGTGGGGCAGCAGAGCTGCGTGGCCTGGAGGAGGCTAGTTGGCAAAGACTCGAGAGTGAGAAAGTAG--AGACTCGGACAAATCATCACATGCTCAACGTCGATTTAAACATCAAGTGAATGTCT--GTTTATTTAACGAGGCTGCTGAATGTGGTAAGAGATGCTAATTAAATAAACGAGCTCCTGTT----TATAAATCACTAATTAATTTTGTTTCTTGACAGAATGTGCTCTGGAGATTTAAATTCTCCCAGCTTAAGGGATCTTCAGATGATGGGAAAACCCGAGT-CAAGCTGCTGTTTCAGCATCTGGACACCAAACAGATTGAGACGAAGGTATGGGG-------CGTGAGTTGTTCTGCC-ACCCACCTACCCGCACACAAAGCGCGGCCCGGACGGTCCCTCCCACCCGCACACAAAGCGCGGCT-CGGACGGTCGCCTGGCCGGAGTCTGCACCCT-GCCATGCACATGGA i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1240506 413 + 1864846 -CTGGAGGCCGGGCTGTGGG-------------------------------------------------------CTGGAGGAGGCCAGTTTGCAAAGACTCAGGAGTGAGAAAGTAG--AGACTCTGACAAATCATCACATGCCAAACGTCGATTTAAACATCAAGTGAATGTCT--G-TTATTTAACGAGGCTGCTGAACGTAGTA--AGATGCTAATTAAATAAACGAGCTCCTG-T----TATAAATCACTAATTAATTTTATTTCTTTACAGAATGTGCTCTGGAGATTTAAATTCTCTCAGCTTAAGGGATCTTCAGATGATGGGAAAACTCGAGT-AAAGCTGCTGTTTCAGAATCTGGACACCAAACAGATTGAGACGAAGGTAGGGGC-------CAGGAGTTGTTCTGCC-A----------------------------------------CCCGCCCACACATAAAGGGCAGCT-CAGGTGCCTG-CTGGCCAGAGTCTGCACCCC-CCCACGCACACGTA i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 881174 408 + 5252280 -CTCCAGGCTGG-CTGAGGACAGAGAGAGCCA---GGG-------------------------------------CTGT--GAGGTCCCTTCACACAGG-TGCAGAAGGAGGAGGTAG--A--------------ATCACATGTGAAAGGTAGACAAGGAAATTAAGTAAATGTCTTCATTCATCTAAACAG----------GTAGTAATAGACATGAATTACATAAATGATCTTTTGTTCATACATACATCACTGATAAATTTCATTTCTTTACAGAATGTTCTCTGGAGATTTAAGTTCTCTCAACTTAAGGGATCCTCAGATGATGGAAAAAATCGAAT-AAAGCTGCTGTTTCAGAACCTAGACTCCAAACAAATTGAAATGAAGGTAGGGGA-------GGTAGCTTGTCCTGCA-T----------------------------------------CCCAGCC-CACTTGAGGTTGGCATGCACATGGTCAGCTGGT-GAACTCTCCATTCCTCCCCCTCCCTC--- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1557684 404 + 4416731 TTCACTCACTTGGCTG-------GGGGCGCTCGGTGGT-------------------------------------TTTGAAGACAACATTTTGCA-----TAAAGAATGAGAAGGTAGCAAGTCT--GACA----------------------ATTAAAACAT---GTAAACATCTGCGTTTATTTAAATAGATTATTTAACTTATTAATACGTATTAATTAAGTAAGTAAGCTCTTGTT----TCGAAATCACTAACTAATTTCATTCCTTTACAGAATGTGCTCTGGAGATTTAAGTTCTCTCAGCTTAAGGGATCTTCAGATGATGGAAAAACTCGAGT-AAAGCTGCTGTTCCTGAATCTAGACACCAAACAAATTGAGATGAAGGTAGGGTA-------CACAGTTTATCCTGCCTA----------------------------------------ATCAAGCACACATAAAGTAAAGTT-TAAATGATCAGCAGATAAAAATTTCCATTCAACCCATGTATATTTA i dasNov3.JH576208 C 0 C 0 a score=162544.000000 s hg38.chr2_KI270774v1_alt 1300 21 + 223625 AATAAACCAATAGGTCCTGAA s panTro5.chr2A 1279212 21 + 111504155 AATAAACCAATAGGTCCTGAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1241689 21 + 114371477 AATAAACCAATAGGTCCTGAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1268915 21 + 1464242 AATAAACCAATAGGTCCTGAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 999410 21 + 81552678 AATAAGCCAATAGGTCCCGAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1345467 21 + 108979918 CATAAACCAATAGGTCCCGAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1317646 21 - 111193037 CATAAACCAATAGGTCCCGAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1345766 21 + 3644372 CATAAACCAATAGGTCCCGAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1298614 21 - 10304083 CATAAACCAATAGGTCCCGAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1369030 21 - 107702431 CATAAACCAATAGGTCCCGAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 846188 21 - 2200435 CATAAACCAATAGGTCCCGAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1286141 21 - 13651311 CATAAACCAATAGGTCCCGAA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1300457 21 - 108792865 AGTAAACACGCAGGCCCTGAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1148065 21 - 7082604 AATAAACACACAGGTCCTGAA i saiBol1.JH378218 N 0 C 0 s cebCap1.NW_016107827v1 1240919 21 + 1864846 AGTAAACACGCAGGTCCTGAA i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 881582 15 + 5252280 ------CCCGTGCACATTCAG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1558088 21 + 4416731 AATATACAAGTAAATCATAAA i dasNov3.JH576208 C 0 I 36 a score=1711796.000000 s hg38.chr2_KI270774v1_alt 1321 234 + 223625 GCACGAGTCCTTCCTGAAAATTAGGCAATAGATAACCCGAAAGAGCCTGTCGaggtcaaata-----tcccttatctgaaatgcttgagaccagaagtgtttgggacccttatctgaaatgcttgagaccagaagtgtttggga-----------tttcagattttggaatatttgtggattaggtactgattaagcatctgaaatccaaaaatccaaaaagcaaaatgttccaatgaacatttcctttg s panTro5.chr2A 1279233 196 + 111504155 GCACGAGTCCTTCCTGAAAATTAGGCAATAGATACGCCGAAAGAGCCTGTCGaggtcaaata-----t--------------------------------------cccttatctgaaatgcttgagaccagaagtgtttggga-----------tttcagattttggaatatttgtggaataggtactgattaagcatctgaaatccaaaaattgaaaaaacaaaatgttccaatgaacatttcccttg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1241710 195 + 114371477 GCACGAGTCCTTCCTGAAAATTAGGCAATAGATACGCCGAAAGAGCCTGTCGaggtcaaata-----t--------------------------------------cccttatctgaaatgcttgagaccagaagtgtttggga-----------tttcagattttggaatatttgtggagtaggtactgattaagcatctgaaatccaaaaattgaaaaa-caaaatgttccaatgaacatttcccttg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1268936 196 + 1464242 GCACGAGTCCTTCTTGAAAATTAGGCAATAGATACGCCAAAAGAGGCTGTCGaggtcaaata-----t--------------------------------------cccttatctgaaatgcttgagaccagaagtgtttggga-----------tttcagattttggaatatttgtggattaggtactgattaagcatctgaaatccaaaaatccaaaaagcaaaatgttccaatgaacatttcctttg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 999431 196 + 81552678 GCACGAATCCTTCTTAAAAATTAGGCAATAGATACGCCGAAAGAGACTGTCAaggtcaaata-----t--------------------------------------cctttatctgaaatgcttgggaccagaagtgtttggga-----------tttcagattttggaatatttgtggattaggtactgattaagcatctgaaatccaaaaatccaaaaaacaaaatgttccaatgaacatttcctttg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1345488 196 + 108979918 GCACGAGTCCTTCTTAAAAATTAGACAATAGATACATCGAAAGAGCCTGTCcaggtcaaatg-----t--------------------------------------cccttatctgaaatgcttgggaccaaaagtgtttggga-----------tttcagattttggaatgtttgtggattaggtactgattgagcatctgaaatccaaaaatccagaatacaaaatgttcaaataaacatttcctttg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1317667 196 - 111193037 GCACGAGTCCTTCTTAAAAATTAGACAATAGATACATCGAAAGAGCCTGTCcaggtcaaatg-----t--------------------------------------cccttatctgaaatgcttgggaccaaaagtgtttggga-----------tttcagattttggaatgtttgtggattaggtactgattgagcatctgaaatccaaaaatccagaatacaaaatgttcaaataaacatttcctttg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1345787 196 + 3644372 GCACGAGTCCTTCTTAAAAATTAGACAATAGATACATCGAAAGAGCCTGTCcaggtcaaatg-----t--------------------------------------cccttatctgaaatgcttgggaccaaaagtgtttggga-----------tttcagattttggaatgtttgtggattaggtactgattgagcatctgaaatccaaaaatccagaatacaaaatgttcaaataaacatttcctttg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1298635 196 - 10304083 GCACGAGTCTTTCTTAAAAATTAGACAATAGATACGTCGAAAGAGCCTGTCcaggtcaaatg-----t--------------------------------------cccttatctgaaatgcttgggaccagaagtgtttggga-----------tttcagattttggaatgtttgtcgattaggtactgattgagcatctgaaatccaaaaatacagaatacaaagtgttcaaataaacatttcctttg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1369051 196 - 107702431 GCACGAGTCCTTCTTAAAAATTAGACAATAGATACGTCGAAAGAGCCTGTCcaggtcaaatg-----t--------------------------------------cccttatctgaaatgcttgggaccagaagtgtttggga-----------tttcagattttggaatgtttgtggattaggtactgattgagcatctgaaatccaaaaatccagaatacaaaatgttcaaataaacatttcctttg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 846209 196 - 2200435 GCACGAGTCCTTCTTAAAAATTAGACAATAGATACGTCGAAAGAGCCTGTCcaggtcaaatg-----t--------------------------------------cccttatctgaaatgcttggtaccagaagtgtttggga-----------tttcagattttggaatgtttgtcgattaggtactgattgagcatctgaaatccaaaaatccagaatacaaaatgttcaaataaacatttcctttg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1286162 196 - 13651311 GCACGAGTCCTTCTTAAAAATGAGACAACAGATACGTCAAAAGAGCCTGTCcaggtcaaatg-----t--------------------------------------cccttacctgaaatgcttgggaccagaagtgtttggga-----------tttcagattttggaatgtttgtggattaggtactgattgagcatctgaaatccaaaaatccagaatacaaaatgttcaaataaacatttcctttg i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1300478 196 - 108792865 GCATGGGTCCTTCTTAAAAATTAGACAATGCATGTGTCGAAAGAGCCTGTAcaggtcagata-----t--------------------------------------cctttatctgaaatgctgggaaccagaagtgtttgggg-----------tttcagattttggaatatttatggattaggcactggttgagcatctgaaatccaaaaatccaaaatccaaaatattctggtgagcatttccttta i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1148086 196 - 7082604 GCATGAGTCCTTCTTAAAAATTAGACAACGGATATGTCGAAAGAGCCTGTAcaggtcatgta-----t--------------------------------------cctttatctgaaacactgggaaccagaagtgtttggga-----------tttcagattttggaatatttgtggattaggtactggttgagcatctaaaatccaaaaatccaaaatccaaaatattccaatgaacatttcctttg i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1240940 196 + 1864846 GCATGAGTCCTTCTTAAAAATTAGACAACGGACATGTCGAAAGAGCCTGTAcaagtcagata-----c--------------------------------------cctttatctgaaacgcttggagccagaagtgtttggga-----------tttcagattttagagtatttgtggattaggtactggttgagcatctgaaatccaaaaatccaaaatccaaaatattccaatgaacctttcctttg i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 881597 199 + 5252280 TCATGAATCCT---CAGAAATCAGACACCAGAGATGTCAAGAGAGCCCAGAcaggttgagtgaccctc-------------------------------------------atccgaaatgcttgggaccagaa--agttaggacttcagatttttttcagattttaggatatttgcataatacttaccagtctggcatctcagatctgaacatctgaaatctagaatgctcTGGATatcacttctc--- i otoGar3.GL873658 C 0 C 0 e dasNov3.JH576208 1558109 36 + 4416731 I a score=37089.000000 s hg38.chr2_KI270774v1_alt 1555 5 + 223625 agcat s panTro5.chr2A 1279429 5 + 111504155 agcat i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1241905 5 + 114371477 agcat i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1269132 5 + 1464242 agcat i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 999627 5 + 81552678 agcat i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1345684 5 + 108979918 agcat i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1317863 5 - 111193037 aacat i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1345983 5 + 3644372 agcat i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1298831 5 - 10304083 agcat i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1369247 5 - 107702431 agcat i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 846405 5 - 2200435 agcat i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1286358 5 - 13651311 agcat i colAng1.NW_012118821v1 C 0 C 0 s cebCap1.NW_016107827v1 1241136 5 + 1864846 agcat i cebCap1.NW_016107827v1 C 0 I 31 s otoGar3.GL873658 881796 5 + 5252280 ggcct i otoGar3.GL873658 C 0 C 0 e saiBol1.JH378218 1148282 0 - 7082604 C e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C a score=7800.000000 s hg38.chr2_KI270774v1_alt 1560 1 + 223625 c s panTro5.chr2A 1279434 1 + 111504155 c i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1241910 1 + 114371477 c i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1269137 1 + 1464242 c i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 999632 1 + 81552678 c i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1345689 1 + 108979918 c i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1317868 1 - 111193037 c i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1345988 1 + 3644372 c i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1298836 1 - 10304083 c i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1369252 1 - 107702431 c i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 846410 1 - 2200435 c i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1286363 1 - 13651311 c i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 881801 1 + 5252280 c i otoGar3.GL873658 C 0 I 63 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C a score=15082.000000 s hg38.chr2_KI270774v1_alt 1561 4 + 223625 aggc s panTro5.chr2A 1279435 4 + 111504155 atgc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1241911 4 + 114371477 atgc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1269138 4 + 1464242 atgc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 999633 4 + 81552678 atgc i nomLeu3.chr19 C 0 I 43 s rheMac8.chr13 1345690 4 + 108979918 atgg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1317869 4 - 111193037 atgg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1345989 4 + 3644372 atgg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1298837 4 - 10304083 atgg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1369253 4 - 107702431 atgg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 846411 4 - 2200435 atgg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1286364 4 - 13651311 atgg i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C a score=40867.000000 s hg38.chr2_KI270774v1_alt 1565 14 + 223625 cagcattggagaag s panTro5.chr2A 1279439 14 + 111504155 cagcattcgagaag i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1241915 14 + 114371477 cagcattcgagaag i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 999680 14 + 81552678 CAGCATTTGAGAAG i nomLeu3.chr19 I 43 C 0 s macFas5.chr13 1317873 14 - 111193037 cagcattcaagaag i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1298841 14 - 10304083 cagcattcaagaag i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1369257 14 - 107702431 cagcattcaagaag i chlSab2.chr14 C 0 T 14 s manLeu1.NW_012103754v1 846415 14 - 2200435 cagcattcaagaag i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1286368 14 - 13651311 cagcatttcagaag i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e macNem1.NW_012011978v1 1345993 0 + 3644372 C e rheMac8.chr13 1345694 0 + 108979918 C e gorGor5.CYUI01015607v1 1269142 0 + 1464242 C a score=34859.000000 s hg38.chr2_KI270774v1_alt 1579 14 + 223625 gttgggattctgga s panTro5.chr2A 1279453 14 + 111504155 tttgggattctgga i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1241929 14 + 114371477 tttgggattctgga i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 999694 14 + 81552678 GTTGGGATTCTGGA i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1317887 14 - 111193037 gttgggattctgga i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1298855 14 - 10304083 gttgggattctgga i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 846429 14 - 2200435 gttgggattctgga i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1286382 14 - 13651311 gttgggattctgga i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e chlSab2.chr14 1369271 14 - 107702431 T e macNem1.NW_012011978v1 1345993 0 + 3644372 C e rheMac8.chr13 1345694 0 + 108979918 C e gorGor5.CYUI01015607v1 1269142 0 + 1464242 C a score=9639.000000 s hg38.chr2_KI270774v1_alt 1593 6 + 223625 gcatAT s panTro5.chr2A 1279467 6 + 111504155 acattt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1241943 6 + 114371477 acattt i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 999708 6 + 81552678 ACATTT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1317901 6 - 111193037 acattt i macFas5.chr13 C 0 T 47 s cerAty1.NW_012000820v1 1298869 6 - 10304083 acattt i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 846443 6 - 2200435 acattt i manLeu1.NW_012103754v1 C 0 C 0 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e colAng1.NW_012118821v1 1286396 0 - 13651311 C e chlSab2.chr14 1369271 14 - 107702431 T e macNem1.NW_012011978v1 1345993 0 + 3644372 C e rheMac8.chr13 1345694 0 + 108979918 C e gorGor5.CYUI01015607v1 1269142 0 + 1464242 C a score=21673.000000 s hg38.chr2_KI270774v1_alt 1599 17 + 223625 AGCATGAGGCCAGCATT s panTro5.chr2A 1279473 17 + 111504155 AGCATCAGGCCAGCATT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1241949 17 + 114371477 AGCATCAGGCCAGCATT i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 999714 17 + 81552678 AGCATCAGGTCAGCATT i nomLeu3.chr19 C 0 C 0 s cerAty1.NW_012000820v1 1298875 17 - 10304083 agcgtcaggccagcatt i cerAty1.NW_012000820v1 C 0 I 1 s manLeu1.NW_012103754v1 846449 17 - 2200435 agcgtcaggccagcatt i manLeu1.NW_012103754v1 C 0 C 0 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e colAng1.NW_012118821v1 1286396 0 - 13651311 C e chlSab2.chr14 1369271 14 - 107702431 T e macNem1.NW_012011978v1 1345993 0 + 3644372 C e macFas5.chr13 1317907 47 - 111193037 T e rheMac8.chr13 1345694 0 + 108979918 C e gorGor5.CYUI01015607v1 1269142 0 + 1464242 C a score=19960.000000 s hg38.chr2_KI270774v1_alt 1616 25 + 223625 GGAGAAGGTTGGGATTCTGGAGCAT s panTro5.chr2A 1279490 25 + 111504155 GGAGAAGGTTGGGATTCTGGAGCAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1241966 25 + 114371477 GGAGAAGGTTGGGATTCTGGAGCAT i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 999731 25 + 81552678 GGAGAAGGTTGAGATTCTGGAACAT i nomLeu3.chr19 C 0 C 0 s manLeu1.NW_012103754v1 846466 22 - 2200435 ---caaggttgggattctggggcat i manLeu1.NW_012103754v1 C 0 I 1915 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e colAng1.NW_012118821v1 1286396 0 - 13651311 C e chlSab2.chr14 1369271 14 - 107702431 T e cerAty1.NW_012000820v1 1298892 1 - 10304083 I e macNem1.NW_012011978v1 1345993 0 + 3644372 C e macFas5.chr13 1317907 47 - 111193037 T e rheMac8.chr13 1345694 0 + 108979918 C e gorGor5.CYUI01015607v1 1269142 0 + 1464242 C a score=4719.000000 s hg38.chr2_KI270774v1_alt 1641 12 + 223625 GTAGCATGAGGC s panTro5.chr2A 1279515 12 + 111504155 TTAGCATGAGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1241991 12 + 114371477 TTAGCATCAGGC i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 999756 12 + 81552678 TTAGCATCAGTC i nomLeu3.chr19 C 0 C 0 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e colAng1.NW_012118821v1 1286396 0 - 13651311 C e manLeu1.NW_012103754v1 846488 1915 - 2200435 I e chlSab2.chr14 1369271 14 - 107702431 T e cerAty1.NW_012000820v1 1298892 1 - 10304083 I e macNem1.NW_012011978v1 1345993 0 + 3644372 C e macFas5.chr13 1317907 47 - 111193037 T e rheMac8.chr13 1345694 0 + 108979918 C e gorGor5.CYUI01015607v1 1269142 0 + 1464242 C a score=35258.000000 s hg38.chr2_KI270774v1_alt 1653 44 + 223625 CAGCATTGGAGAAGGTTGGGATTCTGGAGCATGTAGCATGAGGC s panTro5.chr2A 1279527 44 + 111504155 CAGCATTGGAGAAGGTTGGGATTCTGGAACAGTTAGCATCAGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1242003 44 + 114371477 CAGCATTGGAGAAGGTTGGGATTCTGGAACATTTAGCATCAGGC i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 999768 44 + 81552678 CAGCATTCCAGAAGGTTGGGATTCTGGAACATTTAGCATCAGGT i nomLeu3.chr19 C 0 C 0 s chlSab2.chr14 1369257 44 - 107702431 cagcattcaagaaggttgggattctggaacatttAGCGTCAGGC i chlSab2.chr14 T 14 T 44 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e colAng1.NW_012118821v1 1286396 0 - 13651311 C e manLeu1.NW_012103754v1 846488 1915 - 2200435 I e cerAty1.NW_012000820v1 1298892 1 - 10304083 I e macNem1.NW_012011978v1 1345993 0 + 3644372 C e macFas5.chr13 1317907 47 - 111193037 T e rheMac8.chr13 1345694 0 + 108979918 C e gorGor5.CYUI01015607v1 1269142 0 + 1464242 C a score=110688.000000 s hg38.chr2_KI270774v1_alt 1697 88 + 223625 CAGCATTGGAGAAGGTTGGGATTCTGGAGCATTTAGCCTCAGGCCAGCATTGGAGAAGGTTGGGATTCTGGAGCATTTAGCCTCAGGC s panTro5.chr2A 1279571 88 + 111504155 CAGCATTGGAGAAGGTTGGGATTCTGGAACATTTAGCATCAGGCCAGCATTGGAGAAGGTTGGGATTCTGGAGCATTTAGCATCAGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1242047 88 + 114371477 CAGCATTGGAGAAGGTTGGGATTCTGGAACATTTAGCATCAGGCCAGCATTGGAGAAGGTTGGGATTCTGgagcatttagcatcaggc i panPan2.chr2A C 0 T 220 s nomLeu3.chr19 999812 88 + 81552678 CAGCATTGGAGAAGGTTGAGATTCTGGAACATTTAGCATCAGGCCAGCATTCCAGAAGGTTGGGATTCTGGAACATTTAGCATCAGGC i nomLeu3.chr19 C 0 C 0 s chlSab2.chr14 1369257 88 - 107702431 cagcattcaagaaggttgggattctggaacatttAGCGTCAGGCCAGCATTTGAGAAGGTTGGGATTCTGGAACATTTAGCGTCAGAC i chlSab2.chr14 T 44 C 0 s manLeu1.NW_012103754v1 848403 88 - 2200435 cagcattcaagaaggttgggattctggaacattAAGCGTCAGGCTAGCATTCGAGAAGGTTGGGACTCTGGAACATTTAGCGTCAGGC i manLeu1.NW_012103754v1 I 1915 C 0 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e colAng1.NW_012118821v1 1286396 0 - 13651311 C e cerAty1.NW_012000820v1 1298892 1 - 10304083 I e macNem1.NW_012011978v1 1345993 0 + 3644372 C e macFas5.chr13 1317907 47 - 111193037 T e rheMac8.chr13 1345694 0 + 108979918 C e gorGor5.CYUI01015607v1 1269142 0 + 1464242 C a score=95356.000000 s hg38.chr2_KI270774v1_alt 1785 78 + 223625 CAGCATTGGAGAAGGTTGGGATTCTGGAACATTTAGCATCAGGTCAGCATTGGAGAAGGTTGGGATTCTGGAGCATTT s panTro5.chr2A 1279659 78 + 111504155 CAGCATTGGAGAAGGTTGGGATTCTGGAGCATTTAGCATCAGGCCAACATTGGAGAAGGTTGGGATTCTGGAGCATTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1241915 78 + 114371477 cagcattcgagaagtttgggattctggaacatttAGCATCAGGCCAGCATTGGAGAAGGTTGGGATTCTGGAGCATTT i panPan2.chr2A T 220 C 0 s nomLeu3.chr19 999900 78 + 81552678 CAGCATTGGAGAAGGTTGAGATTCTGGAACATTTAGCATCAGTCCAGCATTCCAGAAGGTTGGGATTCTGGAACATTT i nomLeu3.chr19 C 0 C 0 s chlSab2.chr14 1369345 78 - 107702431 CAGCATTTGAGAAGGTTGGGATTCTGGAACAtttagcgtcagaccagcattcaagaaggttgggattctggggcattt i chlSab2.chr14 C 0 T 88 s manLeu1.NW_012103754v1 848491 78 - 2200435 CAGCAGTCGAGAAGGTTGGGATTCTGGAActtttagcgtcaggccagcattcaagaaggttgggattctggggcattt i manLeu1.NW_012103754v1 C 0 T 179 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e colAng1.NW_012118821v1 1286396 0 - 13651311 C e cerAty1.NW_012000820v1 1298892 1 - 10304083 I e macNem1.NW_012011978v1 1345993 0 + 3644372 C e macFas5.chr13 1317907 47 - 111193037 T e rheMac8.chr13 1345694 0 + 108979918 C e gorGor5.CYUI01015607v1 1269142 0 + 1464242 C a score=13039.000000 s hg38.chr2_KI270774v1_alt 1863 16 + 223625 AGCATCAGGTCAGCAT s panTro5.chr2A 1279737 16 + 111504155 AGCATCAGGCCAACAT i panTro5.chr2A C 0 I 334 s panPan2.chr2A 1241993 16 + 114371477 AGCATCAGGCCAGCAT i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 999978 16 + 81552678 AGCATCAGGTCAGCAT i nomLeu3.chr19 C 0 C 0 s chlSab2.chr14 1369335 16 - 107702431 AGCGTCAGACCAGCAT i chlSab2.chr14 T 88 C 0 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e colAng1.NW_012118821v1 1286396 0 - 13651311 C e manLeu1.NW_012103754v1 848569 179 - 2200435 T e cerAty1.NW_012000820v1 1298892 1 - 10304083 I e macNem1.NW_012011978v1 1345993 0 + 3644372 C e macFas5.chr13 1317907 47 - 111193037 T e rheMac8.chr13 1345694 0 + 108979918 C e gorGor5.CYUI01015607v1 1269142 0 + 1464242 C a score=8206.000000 s hg38.chr2_KI270774v1_alt 1879 10 + 223625 TGGAGAAGGT s panTro5.chr2A 1280087 10 + 111504155 TGGAGAAGGT i panTro5.chr2A I 334 I 183 s panPan2.chr2A 1242009 10 + 114371477 TGGAGAAGGT i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 999994 10 + 81552678 TGGAGAAGGC i nomLeu3.chr19 C 0 C 0 s chlSab2.chr14 1369351 10 - 107702431 TTGAGAAGGT i chlSab2.chr14 C 0 C 0 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e colAng1.NW_012118821v1 1286396 0 - 13651311 C e manLeu1.NW_012103754v1 848569 179 - 2200435 T e cerAty1.NW_012000820v1 1298892 1 - 10304083 I e macNem1.NW_012011978v1 1345993 0 + 3644372 C e macFas5.chr13 1317907 47 - 111193037 T e rheMac8.chr13 1345694 0 + 108979918 C e gorGor5.CYUI01015607v1 1269142 0 + 1464242 C a score=33302.000000 s hg38.chr2_KI270774v1_alt 1889 60 + 223625 TGGGATTCTGGAA-CATTTAGCATCAGGTCAGCATTGGAG----------------------------------------------------------------------------------------------AAGGTTGGGATTCTGGAGCAT s panTro5.chr2A 1280280 154 + 111504155 TGGGATTCTGGAAGCAGTTAGCATCAG-CCAGCATTGGAGAAGGTTGGGATTCTTGAAACATTTAGCATTCAGGCCAGCATCGATGAGAAGGTTGGATTAAAATGGAACATTTAGCATCAGGGCCACAAATGGAAAGGTTGGGATTCTGGAGCAT i panTro5.chr2A I 183 C 0 s panPan2.chr2A 1242019 60 + 114371477 TGGGATTCTGGAA-CATTTAGCATCAGGCCAGCATTGGAG----------------------------------------------------------------------------------------------AAGGTTGGGATTCTGGAACAT i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1000004 60 + 81552678 TGAGATTCTGGAA-CATTTAGCATCAGGCCAGCATTCCAG----------------------------------------------------------------------------------------------AAGGTTGAGATTCTGGAACAT i nomLeu3.chr19 C 0 C 0 s chlSab2.chr14 1369361 60 - 107702431 TGGGATTCTGGAA-CAtttagcgtcagaccagcattcaag----------------------------------------------------------------------------------------------aaggttgggattctggggcat i chlSab2.chr14 C 0 T 164 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e colAng1.NW_012118821v1 1286396 0 - 13651311 C e manLeu1.NW_012103754v1 848569 179 - 2200435 T e cerAty1.NW_012000820v1 1298892 1 - 10304083 I e macNem1.NW_012011978v1 1345993 0 + 3644372 C e macFas5.chr13 1317907 47 - 111193037 T e rheMac8.chr13 1345694 0 + 108979918 C e gorGor5.CYUI01015607v1 1269142 0 + 1464242 C a score=5586.000000 s hg38.chr2_KI270774v1_alt 1949 12 + 223625 GTAGCATGAGGC s panTro5.chr2A 1280434 12 + 111504155 TTAGCATCAGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1242079 12 + 114371477 TTAGCATCAGGC i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1000064 12 + 81552678 TTAGCATCAGGC i nomLeu3.chr19 C 0 C 0 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e colAng1.NW_012118821v1 1286396 0 - 13651311 C e manLeu1.NW_012103754v1 848569 179 - 2200435 T e chlSab2.chr14 1369421 164 - 107702431 T e cerAty1.NW_012000820v1 1298892 1 - 10304083 I e macNem1.NW_012011978v1 1345993 0 + 3644372 C e macFas5.chr13 1317907 47 - 111193037 T e rheMac8.chr13 1345694 0 + 108979918 C e gorGor5.CYUI01015607v1 1269142 0 + 1464242 C a score=18985.000000 s hg38.chr2_KI270774v1_alt 1961 31 + 223625 CAGCA-TTGGAGAAGG---TTGGGATTCTG-GAGCA s panTro5.chr2A 1280446 36 + 111504155 CAGCAATTCGAGAAGGCGTTGGGGATTCTATGGGCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1242091 31 + 114371477 CAGCA-TTGGAGAAGG---TTGGGATTCTG-gagca i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1000076 31 + 81552678 CAGCA-TTTGAGAAGG---TTGAGATTCTG-GAACA i nomLeu3.chr19 C 0 C 0 s chlSab2.chr14 1369257 31 - 107702431 cagca-ttcaagaagg---ttgggattctg-gaaca i chlSab2.chr14 T 164 C 0 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e colAng1.NW_012118821v1 1286396 0 - 13651311 C e manLeu1.NW_012103754v1 848569 179 - 2200435 T e cerAty1.NW_012000820v1 1298892 1 - 10304083 I e macNem1.NW_012011978v1 1345993 0 + 3644372 C e macFas5.chr13 1317907 47 - 111193037 T e rheMac8.chr13 1345694 0 + 108979918 C e gorGor5.CYUI01015607v1 1269142 0 + 1464242 C a score=52053.000000 s hg38.chr2_KI270774v1_alt 1992 46 + 223625 TTTAGCCTCAGGCCAGCATTGGAGAAGGTTGGGATTCTGGAGCATT s panTro5.chr2A 1280482 46 + 111504155 TTTAGCATCAGGCCAGCATTGGAGAAGGTTGGGATACTGGAGCATT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1242122 46 + 114371477 tttagcatcaggccagcaatggagaaggttgggattctggagcatt i panPan2.chr2A C 0 T 88 s nomLeu3.chr19 1000107 46 + 81552678 TTTAGCATCAGTCCAGCATTCCAGAAGGTTGGGATTCTGGAACATT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1317860 46 - 111193037 ttgaacatcatggcagcattcaagaaggttgggattctggaacatt i macFas5.chr13 T 47 C 0 s chlSab2.chr14 1369288 46 - 107702431 tttAGCGTCAGGCCAGCATTTGAGAAGGTTGGGATTCTGGAACATT i chlSab2.chr14 C 0 C 0 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e colAng1.NW_012118821v1 1286396 0 - 13651311 C e manLeu1.NW_012103754v1 848569 179 - 2200435 T e cerAty1.NW_012000820v1 1298892 1 - 10304083 I e macNem1.NW_012011978v1 1345993 0 + 3644372 C e rheMac8.chr13 1345694 0 + 108979918 C e gorGor5.CYUI01015607v1 1269142 0 + 1464242 C a score=340.000000 s hg38.chr2_KI270774v1_alt 2038 1 + 223625 G s panTro5.chr2A 1280528 1 + 111504155 T i panTro5.chr2A C 0 I 143 s panPan2.chr2A 1242080 1 + 114371477 T i panPan2.chr2A T 88 C 0 s nomLeu3.chr19 1000153 1 + 81552678 T i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1317906 1 - 111193037 t i macFas5.chr13 C 0 C 0 s chlSab2.chr14 1369334 1 - 107702431 T i chlSab2.chr14 C 0 C 0 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e colAng1.NW_012118821v1 1286396 0 - 13651311 C e manLeu1.NW_012103754v1 848569 179 - 2200435 T e cerAty1.NW_012000820v1 1298892 1 - 10304083 I e macNem1.NW_012011978v1 1345993 0 + 3644372 C e rheMac8.chr13 1345694 0 + 108979918 C e gorGor5.CYUI01015607v1 1269142 0 + 1464242 C a score=60738.000000 s hg38.chr2_KI270774v1_alt 2039 55 + 223625 AGCAT-CAGGCCAGCATTGGAGAAGGTTGGGATTCTGG-AGCA--TTTAGCATCAGGCC s panTro5.chr2A 1280672 59 + 111504155 AGCATTCAGGCCAGCATTGGAGAAGGTTGGGATTCTGGTAGCAATTTTAGCATCAGGCC i panTro5.chr2A I 143 I 186 s panPan2.chr2A 1242081 55 + 114371477 AGCAT-CAGGCCAGCATTGGAGAAGGTTGGGATTCTGg-agca--tttagcatcaggcc i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1000154 55 + 81552678 AGCAT-CAGTCCAGCATTCCAGAAGGTTGAGATTCTGG-AACA--TTTAGCATCAGTCC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1317907 55 - 111193037 AGCGT-CAGGCCAGCATTCAAGAAGGTTGGGATTCTGG-GGCA--tttagcatcaggtc i macFas5.chr13 C 0 C 0 s chlSab2.chr14 1369335 55 - 107702431 AGCGT-CAGACCAGCATTTGAGAAGGTTGGGATTCTGG-AACA--tttagcgtcagacc i chlSab2.chr14 C 0 C 0 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e colAng1.NW_012118821v1 1286396 0 - 13651311 C e manLeu1.NW_012103754v1 848569 179 - 2200435 T e cerAty1.NW_012000820v1 1298892 1 - 10304083 I e macNem1.NW_012011978v1 1345993 0 + 3644372 C e rheMac8.chr13 1345694 0 + 108979918 C e gorGor5.CYUI01015607v1 1269142 0 + 1464242 C a score=31456.000000 s hg38.chr2_KI270774v1_alt 2094 32 + 223625 AGCATTGGAGATGGTTGGGATTCTG-GAGCATT s panTro5.chr2A 1280917 33 + 111504155 AGCATTGGAGAAGGTTGGGATTCTGTGAGGATT i panTro5.chr2A I 186 C 0 s panPan2.chr2A 1242136 32 + 114371477 agcaatggagaaggttgggattctg-gagcatt i panPan2.chr2A C 0 T 88 s nomLeu3.chr19 1000209 32 + 81552678 AGCATTCCAGAAGGTTGGGATTCTG-GAACATT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1317962 29 - 111193037 agcattc---aaggttgggattctg-gggcatt i macFas5.chr13 C 0 T 129 s chlSab2.chr14 1369390 32 - 107702431 agcattcaagaaggttgggattctg-gggcatt i chlSab2.chr14 C 0 T 176 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e colAng1.NW_012118821v1 1286396 0 - 13651311 C e manLeu1.NW_012103754v1 848569 179 - 2200435 T e cerAty1.NW_012000820v1 1298892 1 - 10304083 I e macNem1.NW_012011978v1 1345993 0 + 3644372 C e rheMac8.chr13 1345694 0 + 108979918 C e gorGor5.CYUI01015607v1 1269142 0 + 1464242 C a score=1757.000000 s hg38.chr2_KI270774v1_alt 2126 3 + 223625 GAG s panTro5.chr2A 1280950 3 + 111504155 TAG i panTro5.chr2A C 0 I 194 s panPan2.chr2A 1242080 3 + 114371477 TAG i panPan2.chr2A T 88 C 0 s nomLeu3.chr19 1000241 3 + 81552678 TAG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1317862 3 - 111193037 gaa i macFas5.chr13 T 129 C 0 s chlSab2.chr14 1369246 3 - 107702431 gag i chlSab2.chr14 T 176 C 0 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e colAng1.NW_012118821v1 1286396 0 - 13651311 C e manLeu1.NW_012103754v1 848569 179 - 2200435 T e cerAty1.NW_012000820v1 1298892 1 - 10304083 I e macNem1.NW_012011978v1 1345993 0 + 3644372 C e rheMac8.chr13 1345694 0 + 108979918 C e gorGor5.CYUI01015607v1 1269142 0 + 1464242 C a score=101855.000000 s hg38.chr2_KI270774v1_alt 2129 83 + 223625 CATCAGGTCAGCATTGGAGAAGGTTGGGATTCTGGAGCATTGAGCATCAGGCCAGCATTGGAGAAGGTTGGGATTCTGGAGCA s panTro5.chr2A 1281147 83 + 111504155 CATCAGGCCAGCATTGGAGAAGGTTGGGATTCTGGAACATTTAGCATCAGGCCAGCATTGGAGAAGGTTGGGATTCTGGAGCA i panTro5.chr2A I 194 C 0 s panPan2.chr2A 1242083 83 + 114371477 CATCAGGCCAGCATTGGAGAAGGTTGGGATTCTGgagcatttagcatcaggccagcaatggagaaggttgggattctggagca i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1000244 83 + 81552678 CATCAGGTCAGCATTGGAGAAGGTTGAGATTCTGGAACATTTAGCATCAGGCCAGCATTCCAGAAGGTTGGGATTCTGGAACA i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1317865 83 - 111193037 catcatggcagcattcaagaaggttgggattctggaacatttAGCGTCAGGCCAGCATTCAAGAAGGTTGGGATTCTGGGGCA i macFas5.chr13 C 0 C 0 s chlSab2.chr14 1369249 83 - 107702431 catcatggcagcattcaagaaggttgggattctggaacatttAGCGTCAGGCCAGCATTTGAGAAGGTTGGGATTCTGGAACA i chlSab2.chr14 C 0 C 0 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e colAng1.NW_012118821v1 1286396 0 - 13651311 C e manLeu1.NW_012103754v1 848569 179 - 2200435 T e cerAty1.NW_012000820v1 1298892 1 - 10304083 I e macNem1.NW_012011978v1 1345993 0 + 3644372 C e rheMac8.chr13 1345694 0 + 108979918 C e gorGor5.CYUI01015607v1 1269142 0 + 1464242 C a score=3822.000000 s hg38.chr2_KI270774v1_alt 2212 2 + 223625 TT s panTro5.chr2A 1281230 2 + 111504155 TT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1242166 2 + 114371477 tt i panPan2.chr2A C 0 T 88 s nomLeu3.chr19 1000327 2 + 81552678 TT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1317948 2 - 111193037 tt i macFas5.chr13 C 0 C 0 s chlSab2.chr14 1369332 2 - 107702431 TT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 848390 2 - 2200435 tt i manLeu1.NW_012103754v1 T 179 C 0 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e colAng1.NW_012118821v1 1286396 0 - 13651311 C e cerAty1.NW_012000820v1 1298892 1 - 10304083 I e macNem1.NW_012011978v1 1345993 0 + 3644372 C e rheMac8.chr13 1345694 0 + 108979918 C e gorGor5.CYUI01015607v1 1269142 0 + 1464242 C a score=29262.000000 s hg38.chr2_KI270774v1_alt 2214 18 + 223625 GAGCATCAGGCCAGCATT s panTro5.chr2A 1281232 18 + 111504155 TAGCATCAGGCCAGCATT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1242080 18 + 114371477 TAGCATCAGGCCAGCATT i panPan2.chr2A T 88 C 0 s nomLeu3.chr19 1000329 18 + 81552678 TAGCATCAGGCCAGCATT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1317950 18 - 111193037 tagcatcaggtcagcatt i macFas5.chr13 C 0 T 61 s chlSab2.chr14 1369334 18 - 107702431 TAGCGTCAGACCAGCATT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 848392 18 - 2200435 gagcatcatggcagcatt i manLeu1.NW_012103754v1 C 0 C 0 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e colAng1.NW_012118821v1 1286396 0 - 13651311 C e cerAty1.NW_012000820v1 1298892 1 - 10304083 I e macNem1.NW_012011978v1 1345993 0 + 3644372 C e rheMac8.chr13 1345694 0 + 108979918 C e gorGor5.CYUI01015607v1 1269142 0 + 1464242 C a score=5548.000000 s hg38.chr2_KI270774v1_alt 2232 7 + 223625 GGAGAAA s panTro5.chr2A 1281250 7 + 111504155 GGAGAAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1242098 7 + 114371477 GGAGAAG i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1000347 7 + 81552678 CCAGAAG i nomLeu3.chr19 C 0 C 0 s chlSab2.chr14 1369352 7 - 107702431 TGAGAAG i chlSab2.chr14 C 0 T 88 s manLeu1.NW_012103754v1 848410 7 - 2200435 caagaag i manLeu1.NW_012103754v1 C 0 C 0 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e colAng1.NW_012118821v1 1286396 0 - 13651311 C e cerAty1.NW_012000820v1 1298892 1 - 10304083 I e macNem1.NW_012011978v1 1345993 0 + 3644372 C e macFas5.chr13 1317968 61 - 111193037 T e rheMac8.chr13 1345694 0 + 108979918 C e gorGor5.CYUI01015607v1 1269142 0 + 1464242 C a score=37279.000000 s hg38.chr2_KI270774v1_alt 2239 30 + 223625 GTTGGGATTCTGGAGCATTGAGCATCAGGT s panTro5.chr2A 1281257 30 + 111504155 GTTGGGATTCTGGAGCATTTAGCATCAGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1242105 30 + 114371477 GTTGGGATTCTGgagcatttagcatcaggc i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1000354 30 + 81552678 GTTGGGATTCTGGAACATTTAGCATCAGTC i nomLeu3.chr19 C 0 C 0 s chlSab2.chr14 1369271 30 - 107702431 gttgggattctggaacatttAGCGTCAGGC i chlSab2.chr14 T 88 C 0 s manLeu1.NW_012103754v1 848417 30 - 2200435 gttgggattctggaacattAAGCGTCAGGC i manLeu1.NW_012103754v1 C 0 C 0 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e colAng1.NW_012118821v1 1286396 0 - 13651311 C e cerAty1.NW_012000820v1 1298892 1 - 10304083 I e macNem1.NW_012011978v1 1345993 0 + 3644372 C e macFas5.chr13 1317968 61 - 111193037 T e rheMac8.chr13 1345694 0 + 108979918 C e gorGor5.CYUI01015607v1 1269142 0 + 1464242 C a score=97767.000000 s hg38.chr2_KI270774v1_alt 2269 33 + 223625 CAGCATTGGAGAAGGTTGGGATTCTGGAGCATT s panTro5.chr2A 1281287 33 + 111504155 CAGCATTGGAGAAGGTTGGGATTCTGGAGCATT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1242135 33 + 114371477 cagcaatggagaaggttgggattctggagcatt i panPan2.chr2A C 0 T 44 s gorGor5.CYUI01015607v1 1269142 33 + 1464242 caacattcgagaaggttgggattctggagcatt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1000384 33 + 81552678 CAGCATTCCAGAAGGTTGGGATTCTGGAACATT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1345694 33 + 108979918 cagcattcaagaaggttgggattctggaacatt i rheMac8.chr13 C 0 C 0 s macNem1.NW_012011978v1 1345993 33 + 3644372 cagcattcaagaaggttgggattctggaacatt i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1369301 33 - 107702431 CAGCATTTGAGAAGGTTGGGATTCTGGAACATT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 848447 33 - 2200435 TAGCATTCGAGAAGGTTGGGACTCTGGAACATT i manLeu1.NW_012103754v1 C 0 C 0 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e colAng1.NW_012118821v1 1286396 0 - 13651311 C e cerAty1.NW_012000820v1 1298892 1 - 10304083 I e macFas5.chr13 1317968 61 - 111193037 T a score=1636.000000 s hg38.chr2_KI270774v1_alt 2302 1 + 223625 G s panTro5.chr2A 1281320 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1242124 1 + 114371477 t i panPan2.chr2A T 44 C 0 s gorGor5.CYUI01015607v1 1269175 1 + 1464242 t i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1000417 1 + 81552678 T i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1345727 1 + 108979918 t i rheMac8.chr13 C 0 C 0 s macNem1.NW_012011978v1 1346026 1 + 3644372 t i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1369334 1 - 107702431 T i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 848480 1 - 2200435 T i manLeu1.NW_012103754v1 C 0 C 0 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e colAng1.NW_012118821v1 1286396 0 - 13651311 C e cerAty1.NW_012000820v1 1298892 1 - 10304083 I e macFas5.chr13 1317968 61 - 111193037 T a score=140263.000000 s hg38.chr2_KI270774v1_alt 2303 38 + 223625 AGCATCAGGCCAGCATTGGAGAAGGTTGGGATTCTGGG s panTro5.chr2A 1281321 38 + 111504155 AGCATCAGGCCAGCATTGGAGAAGGTTGGGATTCTGga i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1242125 38 + 114371477 agcatcaggccagcaatggagaaggttgggattctgga i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1269176 38 + 1464242 agcatcaggccagcattcgagaagtttgggattctgga i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1000418 38 + 81552678 AGCATCAGGCCAGCATTCCAGAAGGTTGGGATTCTGga i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1345728 38 + 108979918 AGCGTCAGGCCAGCATTCAAGAAGGTTGGGATTCTGAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1317907 38 - 111193037 AGCGTCAGGCCAGCATTCAAGAAGGTTGGGATTCTGGG i macFas5.chr13 T 61 C 0 s macNem1.NW_012011978v1 1346027 38 + 3644372 AGCGTCAGGCCAGCATTCAAGAAGGTTGGGATTCTGGG i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1369335 38 - 107702431 AGCGTCAGACCAGCATTTGAGAAGGTTGGGATTCTGGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 848481 38 - 2200435 AGCGTCAGGCCAGCAGTCGAGAAGGTTGGGATTCTGGA i manLeu1.NW_012103754v1 C 0 C 0 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e colAng1.NW_012118821v1 1286396 0 - 13651311 C e cerAty1.NW_012000820v1 1298892 1 - 10304083 I a score=24860.000000 s hg38.chr2_KI270774v1_alt 2341 6 + 223625 GCAttt s panTro5.chr2A 1281359 6 + 111504155 gcattt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1242163 6 + 114371477 gcattt i panPan2.chr2A C 0 T 34 s gorGor5.CYUI01015607v1 1269214 6 + 1464242 acattt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1000456 6 + 81552678 acattt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1345766 6 + 108979918 GCAttt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1317945 6 - 111193037 GCAttt i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1346065 6 + 3644372 GCAttt i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1369373 6 - 107702431 ACAttt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 848519 6 - 2200435 Actttt i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1286396 6 - 13651311 acattt i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1148282 0 - 7082604 C e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e calJac3.chr14 1300674 0 - 108792865 C e cerAty1.NW_012000820v1 1298892 1 - 10304083 I a score=43733.000000 s hg38.chr2_KI270774v1_alt 2347 10 + 223625 agcatgaggt s panTro5.chr2A 1281365 10 + 111504155 agcatcaggc i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1269220 10 + 1464242 agcatcaagc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1000462 10 + 81552678 agcatcaggc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1345772 10 + 108979918 agcatcaggt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1317951 10 - 111193037 agcatcaggt i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1346071 10 + 3644372 agcatcaggt i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1369379 10 - 107702431 agcgtcagac i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 848525 10 - 2200435 agcgtcaggc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1286402 10 - 13651311 agcatcaggc i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1300674 10 - 108792865 agcatgatgc i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1148282 10 - 7082604 agcatgacgc i saiBol1.JH378218 C 0 C 0 e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e cerAty1.NW_012000820v1 1298892 1 - 10304083 I e panPan2.chr2A 1242169 34 + 114371477 T a score=37764.000000 s hg38.chr2_KI270774v1_alt 2357 11 + 223625 cagcattggag s panTro5.chr2A 1281375 11 + 111504155 cagcattggag i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1242135 11 + 114371477 cagcaatggag i panPan2.chr2A T 34 C 0 s gorGor5.CYUI01015607v1 1269230 11 + 1464242 cagcattggag i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1000472 11 + 81552678 cagcattcgag i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1345782 8 + 108979918 cagcattc--- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1317961 8 - 111193037 cagcattc--- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1346081 8 + 3644372 cagcattc--- i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1369389 11 - 107702431 cagcattcaag i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 848535 11 - 2200435 cagcattcaag i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1286412 11 - 13651311 cagcattcaag i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1300684 11 - 108792865 cagcgttcagg i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1148292 11 - 7082604 cagtgttcagg i saiBol1.JH378218 C 0 C 0 e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I e cerAty1.NW_012000820v1 1298892 1 - 10304083 I a score=8281.000000 s hg38.chr2_KI270774v1_alt 2368 1 + 223625 a s panTro5.chr2A 1281386 1 + 111504155 a i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1242146 1 + 114371477 a i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1269241 1 + 1464242 a i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1000483 1 + 81552678 a i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1345790 1 + 108979918 a i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1317969 1 - 111193037 a i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1346089 1 + 3644372 a i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1298893 1 - 10304083 a i cerAty1.NW_012000820v1 I 1 C 0 s chlSab2.chr14 1369400 1 - 107702431 a i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 848546 1 - 2200435 a i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1286423 1 - 13651311 a i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1300695 1 - 108792865 a i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1148303 1 - 7082604 a i saiBol1.JH378218 C 0 C 0 e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e otoGar3.GL873658 881802 63 + 5252280 I e dasNov3.JH576208 1558109 36 + 4416731 I a score=103173.000000 s hg38.chr2_KI270774v1_alt 2369 14 + 223625 aggttgggattctg s panTro5.chr2A 1281387 14 + 111504155 aggttgggattctg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1242147 14 + 114371477 aggttgggattctg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1269242 14 + 1464242 aggttgggattttg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1000484 14 + 81552678 aggttgggattctg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1345791 14 + 108979918 aggttgggattctg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1317970 14 - 111193037 aggttgggattctg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1346090 14 + 3644372 aggttgggattctg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1298894 14 - 10304083 aggttaggattctg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1369401 14 - 107702431 aggttgggattctg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 848547 14 - 2200435 aggttgggattctg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1286424 14 - 13651311 agcttgggattctg i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1300696 14 - 108792865 aggctgggatttca i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1148304 14 - 7082604 aggctgggatttca i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 881865 12 + 5252280 AGGTGGGAGTTG-- i otoGar3.GL873658 I 63 C 0 e cebCap1.NW_016107827v1 1241141 31 + 1864846 I e dasNov3.JH576208 1558109 36 + 4416731 I a score=445169.000000 s hg38.chr2_KI270774v1_alt 2383 51 + 223625 gagcatttcagggtttcgat------tttcagatttgggatgctcaagctgTATAGG s panTro5.chr2A 1281401 51 + 111504155 gagcatttcagggtttggat------tttcagatttgggatgctcaagctgTATAGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1242161 51 + 114371477 gagcatttcagggtttggat------tttcagatttgggatgctcaagctgTATAGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1269256 51 + 1464242 gagcatttcagggtttggat------tttcagatttgggatgctcaagctgTATAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1000498 51 + 81552678 gagcatttcagggtttggat------tttcagatttgggatgctcaagctATACAGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1345805 51 + 108979918 gggcatttcagtgtttggat------tttcagatttgggaggctcaagctgTACAGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1317984 51 - 111193037 gggcatttcagtgtttggat------tttcagatttgggaggctcaagctgTACAGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1346104 51 + 3644372 gggcatttcagtgtttggat------tttcagatttgggaggctcaagctgTACAGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1298908 51 - 10304083 gggcatttcaatgtttggat------tttcagatttgggaggctcaagctgTACAGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1369415 51 - 107702431 gggcatttcagtgtttggat------tttcagatttgggacgctcaagctgTACCGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 848561 51 - 2200435 gggcatttcagtgtttggat------tttcagatttgggacgctcaagctgTACAGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1286438 51 - 13651311 gggcatttcagtgtttggat------tttcagatttgggacgctcaggctgTACAGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1300710 51 - 108792865 gagctgtttgggggttggat------tttcagatctgggatgctcagtctgTACTCG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1148318 51 - 7082604 gagcttttcagggtttggat------tttcagatttgggatgctcagcctgTACTGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1241172 51 + 1864846 gagcttttcagggtttggat------tttcagatttgggatgctcagcctgTACTGG i cebCap1.NW_016107827v1 I 31 C 0 s otoGar3.GL873658 881877 54 + 5252280 GGGCACTTCAGGTTTCAGCTTTCAGATTTCAGATTTGGGACGCTCAACCTCCAT--- i otoGar3.GL873658 C 0 C 0 e dasNov3.JH576208 1558109 36 + 4416731 I a score=1541546.000000 s hg38.chr2_KI270774v1_alt 2434 155 + 223625 ATGTTTCGTGTTAGAGAGACGTTTATATCCTAAAATGGTGACCACTGAAACAAAATATTTGATTTTACTAAAATGTACAAGCTTCTTAGTAAATATTAGCAGGAAATCATTATTTTAAAATATACCAGAAGTCAAAATTTAAAGGAAGGGTTTTA s panTro5.chr2A 1281452 155 + 111504155 ATGTTTCCTGTTAGATAGACGTTTATATCCTAAAATCGTGACCGTTGAAACAAAGTATTTGATTTTACTAAAATGTACAAGCTTCTTAGTAAATATTAGCAGGAAATCATTATTTTAAAATATACCAGAAGTCAAAATTTAAAGGAAGGGTTTTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1242212 155 + 114371477 ATGTTTCCTGTTAGAGAGATGTTTATATCCTAAAATCGTGACCGTTGAAACAAAGTATTTGATTTTACTAAAATGTACAAGCTTCTTAGTAAATATTAGCAGGAAATCATTATTTTAAAATATACCAGAAGTCAAAATTTAAAGGAAGGGTTTTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1269307 155 + 1464242 ATGTTTCCTGTTAGAGAGACGTTTATATCCTAAAATGGTGACCGTTGAAACAAAGTATTTGATTTTACTAAAATGTACAAGCTTCTTAGTAAATATTAGCAGGAAATCATTATTTTAAAGTATACCAGAAGTCAAAATTTAAAGGAAGGGTTTTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1000549 155 + 81552678 ATATTTCCTGTTAGAGAGACATTTATATCCTAAAATGGTGACCATTGAAACAAAGTATTTGATTTTACTAAAATGTACAAGCTTCTTAGTAAATATCAGCAGGAAATCAATATTTTAAAATATACCACAAGTCAAAATTTAAAGGAAGGGTTTTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1345856 155 + 108979918 ATGTTTCCTATTAGAGAGACGTTTATATCCTAAAATAGTGACTGTTGAAACAAAGTATTTGGTTTGACTAAAATGTACAAGCATCTTAGTAAATATTAGCAGGAAATCAATATTTTAAAATATACCAGAAGTCAAAATTTAAAGGAAGGGTTTTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1318035 155 - 111193037 ATGTTTCCTATTAGAGAGACGTTTATATCCTAAAATAGTGACTGTTGAAACAAAGTATTTGGTTTGACTAAAATGTACAAGCATCTTAGTAAATATTAGCAGGAAATCAATATTTTAAAATATACCAGAAGTCAAAATTTAAAGGAAGGGTTTTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1346155 155 + 3644372 ATGTTTCCTATTAGAGAGACGTTTATATCCTAAAATAGTGACTGTTGAAACAAAGTATTTGGTTTGACTAAAATGTACAAGCATCTTAGTAAATATTAGCAGGAAATCAATATTTTAAAGTATACCAGAAGTCAAAATTTAAAGGAAGGGTTTTA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1298959 155 - 10304083 ATGTTTCTTATTAGAGAGATGTTTATATCCTAAAATAGTGACTGTTGAAATAAAGTATTTGATTTGACTAAAATGTACAAGCATCTTAGTAAATATTAGCAGGAAATCAATATTTTAAAATATACCAGAAGTCAAAATTTAAAGGAAGGGTTTTA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1369466 155 - 107702431 ATGTTTCCTATTAGAGAGATGTTTATATCCTAAAGTAGTGACTGTTGAAACAAAGTATTTGGTTTGACTAAAATGTACAAGCATCTTAGTAAATATTAGCAGGAAATCAATATTTTAAAATATACCAGAAGTCAAAATTTAAAGGAAGGGTTTTA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 848612 155 - 2200435 ATGTTTCCTATTAGAGAGACGTTTATATCCTAAAATAGTGACTGTTGAAACAAAGTATTTGATTTGACTAAAATGTACAAGCATCTTAGTAAATATTAGTAGGAAATCAATATTTTAAAATATACCAGAAGTCAAAATTTAAAGGAAGGGTTTTA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1286489 155 - 13651311 ATGTGTCTTATTAGAGAGACGTTTATATCCTAAAATAGTGACTGTTGAAACAAAGTATTTGATTTGACTAAAATGTACAAGCATCTTAGTAAATATTCGCAGGAAATCAATATTTTAAAATATACCAGAAGTCAAAATTTAAAGGAAGGGTTTTA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1300761 153 - 108792865 GTG-TTCCTGAAAGAGAGACGTTTATATCCTAAAAGGGTGACTGTTGAAACAAAGTA-TTGGTTTTACTAAAATGTACAAGCTTCTTAGTAAATATCAGCAGGAAATCAGTATTTTAAAATATGCCGTAAGTCAACATTTGAAGGAAGGGTTTTA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1148369 154 - 7082604 GTGTTTCCTGATAGAGAGACGTTTATATCCTAAAATGGTGACTGTTGAAACAAAGTA-TTGAGTTTACTAAAATGTACAAGCTTCTTAGTAAATATCAGCAGGAAATCAATATTTTAAAATATACCATAAGTCAACATTTGAAGGAAGGGTTTTA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1241223 154 + 1864846 GTGTTTCCTGATAGAGAGACGTTTATATCCTAAAATGGTGACTGTTGAAACAAAGTA-TTGGTTTTACTAAAATGTTCAAGCTTCTTAGTAAATATCAGCAGAAAATCAATATTTTAAAATATACCATAAGTCAACATTTGAAGGAAGGGTTTTA i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 881931 151 + 5252280 -TGTTTTCTACTA---AGACTTTTCCATCCTGAAATTGTGGTCATTGAAACAATTTTTTTGACTCTATTAAAAATTACAAGTTTCTTATTAAATGTTAGTAGGAAACTAACATTTTAAAATTCATCAGAAATTACAATTTAAAAGAAAAGATTTA i otoGar3.GL873658 C 0 I 3282 s dasNov3.JH576208 1558145 146 + 4416731 ATGTACCCTGT--GAGAGATCTTTATATCCTAAAATTGTGATC----AATCAGATGATTTGACTCCACTAGAAGGTAGTCGTTTCTTAGTAAATATTAACAG---ATCAGTATTTTAAAATACAAGGAAAGTCAAAATGTAAAGGAAGGCTTTTC i dasNov3.JH576208 I 36 C 0 a score=875047.000000 s hg38.chr2_KI270774v1_alt 2589 103 + 223625 CAAACTGTATTTTGTTTGCACACTGTATGTGATAA---ATTGACTATAATATGGAGAACAAACTTCTTTGTTAATT--AAAGACCTTAGACCT---TTTAAATTCATTGCC s panTro5.chr2A 1281607 103 + 111504155 CAAACTGTATTTTGTTTGCACACTGTATGTGATAA---ATTGACTATAATATTGAGAACAAACTTCTTTGTTAATT--AAAGACCTTAGACCT---TTTAAATTCATTGCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1242367 103 + 114371477 CAAACTGTATTTTGTTTGCACACTGTATGTGATAA---ATTGACTATAATATTGAGAACAAACTTCTTTGTTAATT--AAAGACCTTAGACCT---TTTAAATTCATTGCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1269462 103 + 1464242 CAAACTGTATTTTGTTTGCACACTGTATGTGATAA---ATTGACTATAATATTGAGAACAAACTTCTTTGTTAATT--AAAGACCTTAGACCT---TTTAAATTCATTGCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1000704 103 + 81552678 CAAACTGTATTTTGTTTGCACACTGTATGTGATAA---ATTGACAATAATATTGAGAACAAACTTCTTTGTTAATT--AAAGACCTTAGACCT---TTTAAATTCATTGCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1346011 104 + 108979918 CAAACTGTATTTTGTTTGCACCCTGTATGTGATAA---ATTGACCATAATATTGAGAACAAACTTCTTTGTTAATT-AAAAGACCTTAGACCT---TTTAAATTCATTGCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1318190 104 - 111193037 CAAACTGTATTTTGTTTGCACCCTGTATGTGATAA---ATTGACCATAATATTGAGAACAAACTTCTTTGTTAATT-AAAAGACCTTAGACCT---TTTAAATTCATTGCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1346310 104 + 3644372 CAAACTGTATTTTGTTTGCACCCTGTATGTGATAA---ATTGACCATAATATTGAGAACAAACTTCTTTGTTAATT-AAAAGACCTTAGACCT---TTTAAATTCATTGCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1299114 104 - 10304083 CAAACTGTATTTTGTTTGCACCCTGTATGTGATAA---ATTGACTATAATATTGAGAACAAACTGCTCTGTTAATT-AAAAGACCTTAGACCT---TTTAAATTCATTACC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1369621 104 - 107702431 CAAACTGTATTTTGTTTGCACCCTGTATGTGATAA---ATTGACCATAATATTGAGAACAAACTTCTTTGTTAATT-AAAAGACCTTAGACCT---TTTAAATTCATTGCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 848767 104 - 2200435 CAAACTGTATTTTGTTTGCCCCCTGTATGTGATAA---ATTGACCATAATATTGAGAACAAACTTCTTTGTTAATT-AAAAGACCTTAGACCT---TTTAAATTCATTGCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1286644 104 - 13651311 CAAACTGTATTTTGTTTGCACCCTGTATGTGATAA---ATTGACTATAATATTGAGAACAAACTTCTTTGTTAATT-AAAAGACCTTAGACCT---TTTAAATTCATTGCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1300914 106 - 108792865 CAAACTGTGTCTTGTTTGCACGCTGTATGCGATGATACACTGACCGTAATCATGAGGACACACTGCTTTGCTAATG-AAAAGA-CTCAGACCT---TTCAAATTCATTGCC i calJac3.chr14 C 0 M 1341 s saiBol1.JH378218 1148523 106 - 7082604 CAAACTGTGTCTTGTTTGCACACTGTGCGTGATGATACACTGACTATAATCATGAGAACGAACTGCTCTGATAATG-AAAAGA-CTTAGACCT---TTCAAATTCATTGCG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1241377 106 + 1864846 GAAACTGTGTCTTGTTTGCACACTGTACGTGATGATACACTGACTATAATCATGAGAACGAATTGCTCTGTTAATG-AAAAGA-CTTAGACCT---TTCAAATTCATTGCA i cebCap1.NW_016107827v1 C 0 C 0 s dasNov3.JH576208 1558291 97 + 4416731 CAAAC-----------TGCACTAACTATATGATTC---ATTTTATATAATAGTGAGAGCAAGCTGCTCTTTTCATTGAAAGGACCTTAGAGTTAACTTTAAATTTGTTGCA i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 882082 3282 + 5252280 I a score=1367832.000000 s hg38.chr2_KI270774v1_alt 2692 180 + 223625 TGGAGGTGACATTGTACTATTGA--CAGGTGTTGACTTTTAC-CATATTTTATGTATAAATGTGTTGCCCACAAGCCAG-TTTAATATAAACTTAATAAGACTAAAGATTAAATTTACTAAACTGAAAAATAAATTTTAAAAAAT---AGACTCATGAACACATACGGTGTGGAAACAGATTGTCAA s panTro5.chr2A 1281710 178 + 111504155 TGGAGGTGACATTGTACTATTGG--CAGGTGTTGACTTTTAC-CATATTTTATGTATAAATGTGTTGTCCACAAGCCAG-TTTAATATAAACTTAATAAGACTGAAGATTAAATTTACTAAACTGAAAAATAAATTTTAAAAAAT---AGACTC--GAACACATACGGTGTGGAAACAGATTGTCAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1242470 178 + 114371477 TGGAGGTGACATTGTACTATTGG--CAGGTGTTGACTTTTAC-CATATTTTATGTATAAATGTGTTGTCCACAAGCCAG-TTTAATATAAACTTAATAAGACTGAAGATTAAATTTACTAAACTGAAAAATAAATTTTAAAAAAT---AGACTC--GAACACATACGGTGTGGAAACAGATTGTCAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1269565 180 + 1464242 TGGAGGTGACATTGTACTGTTGA--CAGGTGTTGACTTTTAC-CATATTTTATGTATAAATGTGTTGCCCACAGGCCAG-TTTAATATAAACTTAATAAGACTAAAGATTAAATTTACTAAACTGAAAAATAAATTTTAAAAAAT---AGACTCATGAACACATACGGTGTGGAAACAGGTTGTCGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1000807 184 + 81552678 TAGAGGTGACATTGTACTATTGA--CAGGTGTTGACTTTTAC-CATATTTTATGTATAAGTGTGTTGCCCAGAAGCCAGTTTTAATATAAACTTAATAAGACTAAAGATTAAATTTACTAAACTGAAAAATAAATTTTAAAAAATATGAGACTCATGAACACATATTGTGTGGAAACAGATTGTCAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1346115 182 + 108979918 TGGAGGTGACATTGTACTATTGA--CAGGTGTTGGCTTTTAC-CATATTTTATGTATAAATGTGTTGCCTACAAGCCAGTTTTTATATAAACTTAGTAAGAC--AAGATTAAATTTACTAAACTGAAAAATAAATTTTAAAAAATATGAGACTCATGAACATATATTGTGTGGAAACAGATTGTCAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1318294 182 - 111193037 TGGAGGTGACATTGTACTATTGA--CAGGTGTTGGCTTTTAC-CATATTTTATGTATAAATGTGTTGCCTACAAGCCAGTTTTTATATAAACTTAGTAAGAC--AAGATTAAATTTACTAAACTGAAAAATAAATTTTAAAAAATATGAGACTCATGAACATATATTGTGTGGAAACAGATTGTCAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1346414 182 + 3644372 TGGAGGTGACATTGTACTATTGA--CAGGTGTTGGCTTTTAC-CATATTTTATGTATAAATGTGTTGCCTACAAGCCAGTTTTTATATAAACTTAGTAAGAC--AAGATTAAATTTACTAAACTGAAAAATAAATTTTAAAAAATATGAGACTCATGAACATATATTATGTGGAAACAGATTGTCAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1299218 184 - 10304083 TGGAGGTGACGTTGTACTGTTGA--TAGGTGTTGACTTTTAC-CGTATTTTATGTATAAATGTGTTGCCCACAAGCCAGTTTTTATATAAACTTAATAAGACTAAAGATTAAATTTACTAAACTGAAAAATAAATTTTAAAAAATACAAGACTCATGAACACATATTGTGTGGAAACAGATTGTCAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1369725 182 - 107702431 TGGAGGTGACATTGTACTATTGA--CAGGTGTTGACTTTTAC-CATATTTTATGTATAAATGTGTTGCCCACAAGCCAGTTTTAATATAAACTTAATAAGAC--AAGATTAAATTTACTAAACTGAAAAATAAATTTTAAAAAATATGAGACTCATGAACACATATTGTGTGAAAACAGATTGTCAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 848871 184 - 2200435 TGGAGGTGACATTGTACTATTGA--CAGGTGTTGGCTTTTAC-CGTATTTTATGTATAAATGTGTTGCCCACAAGCCAGTTTTTATATAAACTTAATAAGACTAAAGATTAAATTTACTAAACTGAAAAATAAATTTTAAAAAATACGAGACTCATGAACACATATTGTGTGGAAACAGATTGTCAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1286748 184 - 13651311 TGGAGGTGACATTGTACTATTGA--CAGGTATTGACTTTTAC-CATATTTTATGTATAAATATGTTGCCCACAAGCCAGTTTTAATATAAACTTAATAAGACTAAAGATTAAATTTACTAAACTGAAAAATAAATTTTAAAAAATATGAGACTCATGAACACATATTGTGTGGAAACAGATTGTCAG i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1148629 184 - 7082604 TGGAGGTGACATTTTACCATTGA--CAGGTATTGACTTTTAC-CGTAGTTTATGTATAAATGTGTTGCCAACAAACCAGTTTTAATATAAACTTAATAAGACTAAAGATTAAATTTACTACAATGAAAAATAAGTTATAGGAAAGATGAGACTCTTGAACACATCTTGTTTGGAAACAGATCGTCAA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1241483 184 + 1864846 TGGAGGTGACATTTTACCATTGA--CAGGTATTGACTTTTAC-CGTAGTTTATGTATAAATGTGTTGCCAACAAACCAGTTTTAATATAAACTTAATAAGACTAAAGATTAAATTAACTACACTGAAAAATAAGTTTTAGGAAATGTGAGACTCCTGAACACGTATTATTTGGGAACAGGTGGTCAA i cebCap1.NW_016107827v1 C 0 C 0 s dasNov3.JH576208 1558388 180 + 4416731 TTGAGCTGTCATTTTACGAACACATCAGGTATTGATTTTTTCTCATGTTTTATGTTTAAATGTTTTCTCAATAAATCCAATTTGGTGTAAACTAAAGACATCTTAAGCATGAATT--CCAATGAGTACATTAAAATATAAAAGG----AGAACCATAAGTAAATATTGTTTGGAAACAGTTTATCA- i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 882082 3282 + 5252280 I e calJac3.chr14 1301020 1341 - 108792865 M a score=1207991.000000 s hg38.chr2_KI270774v1_alt 2872 139 + 223625 TACTTTGCACACATTTTTTTCTCTGATGGAATTAATCTGAGCAACATGTCACACATGGCATTTTTATACGTGAAAGTTTAG-GTCAACTTTGATCCTCTCTTCATTGATCTCAATGAAATGACATTTTATAGTTGC-TTTT s panTro5.chr2A 1281888 139 + 111504155 TACTTTGCACACATTTTTTTCTCTGATGGAATTAATCTGAGCAACACGTCACACATGGCATTTTTATACGTGAAAGTTTAG-GTCAACTTTGATCCTCTCTTCACTGATGTTAATGAAATGACATTTTATAGTTGC-TTTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1242648 139 + 114371477 TACTTTGCACACATTTTTTTCTCTGATGGAATTAATCTGAGCAACACGTCACACATGGCATTTTTATACGTGAAAGTTTAG-GTCAACTTTGATCCTCTCTTCACTGATGTTAATGAAATGACATTTTATAGTTGC-TTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1269745 139 + 1464242 TACTTTGCACACATTTTTTTCTCTGATGGAATTAATCTGAGCAACACGTCACACATGGCATTTTTATACGTGAAAGTTTAG-GTCAACTTTGATCCTCTCTTCATTGATCTCAATGAAATGACATTTTATAGTTGC-TTTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1000991 139 + 81552678 TACTTTGCAGACATTTTTTTCTCTGATGGAATTAATCTGAGCAACACGTCACACATGGCATTTTTATATGTGAAAGTTTAC-GTCGACTTTGATCCTCTCTTCATTGATCTCAATGAAATGACATTTTATAGTTGC-TTTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1346297 140 + 108979918 TACTTTGCAGACATTTTTTTCTCTGATGGAATTAATCTGAGCAACACATCACATGTGGCATTTTTATATGTGAAAGTTTAG-GTCAACTTTGAACCTCTCTTCATTGATCTCAATGAAATGACAATTTATAGCTGTACTTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1318476 140 - 111193037 TACTTTGCAGACATTTTTTTCTCTGATGGAATTAATCTGAGCAACACGTCACATGTGGCATTTTTATATGTGAAAGTTTAG-GTCAACTTTGAACCTCTCTTCATTGATCTCAATGAAATGACAATTTATAGCTGTACTTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1346596 140 + 3644372 TACTTTGCAGACATTTTTTTCTCTGATGGAATTAATCTGAGCAACACGTCACATGTGGCATTTTTATATGTGAAAGTTTAG-GTCAACTTTGAACCTCTCTTCATTGATCTCAATGAAATGACAATTTATAGCTGTACTTA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1299402 140 - 10304083 TACTTTGCAGACATTTTTTTCTCTGATGGAATTAATCTGAGCAGCCCGTCACACGTGGCATTTTTATATGTGAAAGTTCAG-GTCAGCTTTGATCCTCTCTTCATTGATCTCAATGAAATGACAATTTATAGCTGTACTTA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1369907 140 - 107702431 TACTTTGCAGACATTTTTTTCTCTGATGGAATTAATCTGAGCAACCCGTCACATGTGGCATTTTTATATGTGAAAGTTTAG-GTCAACTTTGAACCTCTCTTCATTGATCTCAATGAAATGACAATTTATAGCTGTACTTA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 849055 139 - 2200435 TACTTTGCAGACATTTTTTTCTCTGATGGAATTAATCTGAGCAACACGTCACACGTGGCATTTTTATATGTGAAAGTTCAG-GTCAACTTTGATCCTCTCTTCATTGATCTCAATGAAATGACAATTTATAGCTGC-TTTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1286932 138 - 13651311 TACTTTGCAGACATTTTTTTCTCTGATGGAATTAATCTGAGCAACACGTCACATGTGGCATTTTTATATGTGAAAGTTCAG-GTCAACTTTGATCCTCTCTTCGTTGATCTCAATGAAATGACAGTTTATAGCTG--CTTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1302361 138 - 108792865 TACTTTGCAGGCA-TTTTTTCTCTGATGGAATTGATCAGAGCAGCAGGTCACACATGGCGTTTTTATAGGTGACAGTTCAG-GTCGGCTTTGATCCCCTCTTCACTGATCTCAGAGAAATGACATTTTATAGCTCC-TTTT i calJac3.chr14 M 1341 C 0 s saiBol1.JH378218 1148813 139 - 7082604 TACTTTGCAGGCATTTTTTTCTCCAATGGAATTAATCAGAACAACAGGTCACACATGGCATTTTTATAGGTGAAAGTTCAA-GTCAGCTTTGATCCTCTCTTCATTGATCTCAATGAAATGGCATTTTATAGCTCC-TTTT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1241667 139 + 1864846 TATTTTGCAGGCATTTTTTTCTCCGATGGAATTAATCAGAGCAACAGGTCACACATGGCATTTTTATAAGTGAAAGTTTAG-GTCAGCTTTGATCCTCTCTTCATTGATTTCAATGAAATGACATTTTATAGCTCC-TTTT i cebCap1.NW_016107827v1 C 0 C 0 s dasNov3.JH576208 1558568 124 + 4416731 ----------GCACTTATTTTTCTGATGAAATTAATCAGAGGAACATATCACACATGGCCCTTTT-TATCAGAACTTTTAGCATCAATTTTAA---CCTCTTTATTGACTCACATGAAATAG--TTTCATGACTCC-TTTT i dasNov3.JH576208 C 0 I 218 e otoGar3.GL873658 882082 3282 + 5252280 I a score=229699.000000 s hg38.chr2_KI270774v1_alt 3011 28 + 223625 AAGTACAGCGGAAATTGTATGGGATTGT s panTro5.chr2A 1282027 28 + 111504155 AAGTACAACGGAAATTGTATGGGATTGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1242787 28 + 114371477 AAGTACAACGGAAATTGTATGGGATTGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1269884 28 + 1464242 AAGTACAACAGAAATTGTATGGGATTGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1001130 26 + 81552678 AAGTACAACGGAAA-TGTATGGGATTG- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1346437 28 + 108979918 AAGTACAACGGAAATTGTATGTGATTGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1318616 28 - 111193037 AAGTACAACGGAAATTGTATGTGATTGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1346736 28 + 3644372 AAGTACAACGGAAATTGTATGTGATTGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1299542 28 - 10304083 AAGTACAACGGAAATTGTATGTGATTGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1370047 28 - 107702431 AAGTACAACGGAAATTGTATGTGATTGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 849194 28 - 2200435 AAGTACAATGGAAATTGTATGTGATTGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1287070 28 - 13651311 AAGTACAACGGCAATTGTATGTGATTGT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1302499 28 - 108792865 AAGTACAACGGAAATTGTATGGAGTTAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1148952 28 - 7082604 AAGTACAACGGAAATTGTATGGAATTGC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1241806 28 + 1864846 AAGTACAACGGAAATTGTATGGAATTGC i cebCap1.NW_016107827v1 C 0 C 0 e otoGar3.GL873658 882082 3282 + 5252280 I e dasNov3.JH576208 1558692 218 + 4416731 I a score=205536.000000 s hg38.chr2_KI270774v1_alt 3039 22 + 223625 TTGACATTTTTATGTTTTGGAA s panTro5.chr2A 1282055 22 + 111504155 TTGAGATTTTTATGTTTTGGAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1242815 22 + 114371477 TTGACATTTTTATGTTTTGGAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1269912 22 + 1464242 TTGACATTTTTATGTTTTGGAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1001156 22 + 81552678 TTGACATTTTTATGTTTTGGAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1346465 22 + 108979918 TTGACATTTCTATGTTTTGGAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1318644 22 - 111193037 TTGACATTTTTATGTTTTGGAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1346764 22 + 3644372 TTGACGTTTTTATGTTTTGGAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1299570 22 - 10304083 TTGACATTTTTATGTTTTGGAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1370075 22 - 107702431 TTGACATTTTTATGTTTTGGAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 849222 22 - 2200435 TTGACATTTTTATGTTTTGGAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1287098 22 - 13651311 TTGACATTTTTATGTTTTGGAA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1302527 22 - 108792865 TTGACATTCTTACGTTTTGGAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1148980 22 - 7082604 TTGACATTCTTACGTCTTGGAA i saiBol1.JH378218 C 0 M 1308 s cebCap1.NW_016107827v1 1241834 22 + 1864846 TTGACATTCTTACGTTTTGGAA i cebCap1.NW_016107827v1 C 0 C 0 s dasNov3.JH576208 1558910 22 + 4416731 ccaGCATTCTTACACTTAGATA i dasNov3.JH576208 I 218 C 0 e otoGar3.GL873658 882082 3282 + 5252280 I a score=4244307.000000 s hg38.chr2_KI270774v1_alt 3061 593 + 223625 ATTGACAAAAGCAAAACCTGAATGCAGATGGTACAGACACTGTGGCTCCTGGGCTGGGGGAGAGCGATGAGGCAGCGGCACTCGTGCTGACCGCAGTGCC-TGAGCAGGC------AAGGCGCTGACCTCTCAGCAGGCTGCCCTGAGCCGCATCCTGGGGTCGTCAGCCACCAGCAAGGTGGGAACGCGGAGAGAGAG------GCTTGACATCAGTTTCCATCTGGTATTTCACTGGCTTGGATGTCAATGGATCAGGGATGAAAATAGAATGTTCTTCCTCTGGTTTGTTTATTTATGCAGCTGTTTGCCTTGG---GCGCCATCACCGGGGAGGAGC----------ACCGTAACCTTT-GCTGCCTTAATCTTGTGGAGCTCTGAGTCTCATACTG--TGAGGGTGCCG-----------------GAGGTCTACGGTG-GCCATGAGGGTTTC--ACGCCT-GCGGTGTCCCCGTGGCTTT---CTGAGCCTC--TGTCATCCCCGGGGCTCAGGCTTCAGGACCTCCAGCAGCTCCCATGGCATCTGAAACACCCTTTTGACAGTGTCTGTTGAGGT-------TAAATGTA---------TTTGTGTTTTATTTGTTAA-------------------------------------------------TGATcagtcagctcttgatta--tctgttaatgaaagga s panTro5.chr2A 1282077 595 + 111504155 ATTGACAAAAGCAAAACCTGAATGCAGGTAGTACAGACACTGTGGCTCCTGGGCTGGGGGAGAGTGATGAGGCAGCGGCACTCGTGCTGACCGCAGTGCCCTGAGCAGGC------AAGGCGCTGACCTCTCAGCAGGCTGCCCTAAGCCGCATCCCGGGGTCGTCAGCCACCAGCAAGGTGGCAACGCGGAGAGAGAG------GCTTGACATCAGTTTCCATCTGGTATTTCACTGGCTTGGATGTGAATGGATCAGGGATGAAAATAGAACGTTCTTCCTCTGGTTTGTTTATTTATGCAGCTGTTTGCCTTGG---GCGCCATCACCGGGGAGGAGC----------ACCGTAACCTTTTGCTGCCTTAATCTTGTGGAGCTCTGAGTCTCATACTG--TGAGGGTGCCG-----------------GAGGTCTACGGTG-GCCATGAGGGTTTC--ACGCCT-GCGGTGACCCCGTGGCTTT---CTGAGCCTC--TGTCATCCCCGGGGCTCAGGCTTCAGGACCTCCAGCAGCTCCCATGGCATCTGAAACACCCTTTTGACAGTGTCTGTTGAGGT-------TAAATGTA---------TTTGTGTTTTATTTGTTAG-------------------------------------------------TGATCAGTCAGCTCTTGATTA--TCTGTTAATAAAAGGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1242837 595 + 114371477 ATTGACAAAAGCAAAACCTGAATGCAGGTGGTACAGACACTGTGGCTCCTGGGCTGGGGGAGAGTGATGAGGCAGCGGCACTCGTGCTGACCGCAGTGCCCTGAGCAGGC------AAGGCGCTGACCTCTCAGCAGGCTGCCCTGAGCCGCATCCCGGGGTCGTCAGCCACCAGCAAGGTGGGAACGCGGAGAGAGAG------GCTTGACATCAGTTTCCATCTGGTATTTCGCTGGCTTGGATGTGAATGGATCAGGGATGAAAATAGAACGTTCTTCCTCTGGTTTGTTTATTTATGCAGCTGTTTGCCTTGG---GCGCCATCACCGGGGAGGAGC----------ACCGTAACCTTTTGCTGCCTTAATCTTGTGGAGCTCTGAGTCTCATACTG--TGAGGGTGCCG-----------------GAGGTCTACGGTG-GCCATGAGGGTTTC--ACGCCT-GCGGTGTCCCCGTGGCTTT---CTGAGCCTC--TGTCATCCCCGGGGCTCAGGCTTCAGGACCTCCAGCAGCTCCCATGGCATCTGAAACACCCTTTTGACAGTGTCTGTTGAGGT-------TAAATGTA---------TTTGTGTTTTATTTGTTAA-------------------------------------------------TGATCAGTCAGCTCTTGATTA--TCTGTTAATAAAAGGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1269934 595 + 1464242 ATTGACAAAAGCAAAACCTGAATGCAGATGGTACAGACACTGCGGCTCCTGGGCTGGGGGAGAGTGATGAGGCAGCGGCACTCGTGCTGACCGCAGTACCCTGAGCAGGC------AAGGCACTGACCTCTCAGCAGGCTGCCCTGAGCCGCATCCCGGGGTCGTCAGCCACCAGCAAGGTGGGAACGCGGAGAGAGAG------GCTTGACATCAATTTCCATCTGGTATTTCACTGGCTTGGATGTGAATGGATCAGGGATGAAAATAGAACGTTCTTCCTCTGGTTTGTTTATTTATGCAGCTGTTTGCCTTGG---GCGCCATCACCGGGGAGGAGC----------ACCGTAACCTTTTGCTGCCTTAATCTTGTGGAGCTCTGAGTCTCCTACTG--TGAGGGTGCCG-----------------GAGGTCTACGGTG-GCCATGAGGGTTTC--ACGCCT-GCGGTGTCCCCGTGGCTTT---CTGAGCCTC--TGTCATCCCCGGGGCTCAGGCTTCAGGACCTCCAGCAGCTCCCATGGCATCTGAAACACCCTTCTGACAGTGTCTGTTGAGGT-------TAAATGTA---------TTTGTGTTTTATTTGTTAA-------------------------------------------------TGATCAGTCAGCTCTTGATTA--TCTGTTAATGAAAGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1001178 593 + 81552678 ATTGACAAAAGCAAAACGTGAATGCAGATGGTACAGACGCTGTGGCTGCTGGGGTGGGGGACAGTGATGAGGCAGCGGCACTCGTGCTGAGCACAGGAAC-TGAGCAGGC-----AAAGGCGCTGACCTCTCAGCAGGCTGCCCTGAGCTGCATCC-AGGGTCGTCAGCCACCAGCAAGGTGGGAACGCGGAGAGAGAG------GCTTGACATCAATTTCCATCTGGTATTTCACTGGCATGGATGTGAATGGATCGGGGATGAAAATAGAACATTCTTCCTCTGGGTTGTTTATTTATGCAGCTGTTTGCCTC-G---GTGCCATCGCAGGGGAGGAGC----------ACCGTAACCTTTTGCTGCCTTAATCTTGTGGAGCTCTGAGTCTCATACTG--TGAGGGTGCAG-----------------GAGGTCTCTGGTG-GCCATGAGGGTTTC--ACGCCT-GCGGTGTCCCCGTGGCCTT---CTGAGCCCT--TGTCATCCCCGGGGCTCAGGCTTCAGGACCTCCAGCAGCTTCCATGGCATCTGAAACACCCTTTTGACAGTGTCTGTTGAGGT-------TAAACGTA---------TTTGTGTTTTATTTGTTAA-------------------------------------------------TGATCAGTCAGCTCTTGATTA--TCTGTTAATAAAAGGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1346487 582 + 108979918 ATTGACAAAAGTAAAACCTGATTGCAGATGGTACAGAGGCTGTGGCTCCTGGGGTGGGGGACAGTGATGAGGCAGCAGCACTCGTGCTGACCGCAGGGCCCTGAG-----------------CTGACCTCTCAGCAGGCTGCCCTGAGCCGCATCCCGGGGTCGTCAGCCGCCAGCAAGCTGGGAATGTGGAGAGAGAG------GCTTGACATCAATTTCCATCTGGTATTTCACTGGCATGGATGTGAATGGATCAGGGATGAAAATAGAACGTTCTTCCTCTGGTTTGTTTATTTATGCAGCTGTTTGCCTTGG---GCCCCCTGGCGGGGGAGGAGC----------ACCATAACCTTTTGCTGCTTTAATCTTGTGGAGCTCTGAGTCTCGTACTG--TGAGGGCGC-------------------GAGGTCTCCGGTG-GCCATGAGGGTTTC--ATGCCC-GCGGTGTCCCTGTGGCTTT---CTGAGCCCC--TCTCATCCCCGGGGCACAGGCTTCAGGACCTCCAGCAGCTTCCATGGCATCTGAAACACCCTTTTAACAGTGTCTGTTAAGGT-------TAAATGCA---------TTTGTGTTTTATTTGTTAA-------------------------------------------------TGATcagtcaggtcttgatta--tctgttaataaaagga i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1318666 582 - 111193037 ATTGACAAAAGTAAAACCTGATTGCAGATGGTACAGAGGCTGTGGCTCCTGGGGTGGGGGACAGTGATGAGGCAGCAGCACTCGTGCTGACCGCAGGGCCCTGAG-----------------CTGACCTCTCAGCAGGCTGCCCTGAGCCGCATCCCGGGGTCGTCAGCCGCCAGCAACCTGGGAATGTGGAGAGAGAG------GCTTGACATCAATTTCCATCTGGTATTTCACTGGCATGGATGTGAATGGATCAGGGATGAAAATAGAACGTTCTTCCTCTGGTTTGTTTATTTATGCAGCTGTTTGCCTTGG---GCCCCCTGGCGGGGGAGGAGC----------ACCATAACCTTTTGCTGCTTTAATCTTGTGGAGCTCTGAGTCTCGTACTG--TGAGGGCGC-------------------GAGGTCTCCGGTG-GCCATGAGGGTTTC--ATGCCC-GCGGTGTCCCTGTGGCTTT---CTGAGCCCC--TCTCATCCCCGGGGCACAGGCTTCAGGACCTCCAGCAGCTTCCATGGCATCTGAAACACCCTTTTAACAGTGTCTGTTAAGGT-------TAAATGCA---------TTTGTGTTTTATTTGTTAA-------------------------------------------------TGATcagtcagctcttgatta--tctgttaataaaagga i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1346786 582 + 3644372 ATTGACAAAAGTAAAACCTGATTGCAGATGGTACAGAGGCTGTGGCTCCTGGGGTGGGAGACAGTGATGAGGCAGCAGCACTCGTGCTGACCGCAGGGCCCTGAG-----------------CTGACCTCTCAGCAGGCTGCCCTGAGCCGCATCCTGGGGTCGTCAGCCGCCAGCAACCTGGGAATGTGGAGAGAGAG------GCTTGACATCAATTTCCATCTGGTATTTCACTGGCATGGATGTGAATGGATCAGGGATGAAAATAGAACGTTCTTCCTCTGGTTTGTTTATTTATGCAGCTGTTTGCCTTGG---GCCCCCTGGCGGGGGAGGAGC----------ACCATAACCTTTTGCTGCTTTAATCTTGTGGAGCTCTGAGTCTCGTACTG--TGAGGGCGC-------------------GAGGTCTCCGGTG-GCCATGAGGGTTTC--ATGCCC-GCGGTGTCCCTGTGGCTTT---CTGAGCCCC--TCTCATCCCCGGGGCACAGGCTTCAGGACCTCCAGCAGCTTCCATGGCATCTGAAACACCCTTTTAACAGTGTCTGTTAAGGT-------TAAATGCA---------TTTGTGTTTTATTTGTTAA-------------------------------------------------TGATcagtcagctcttgatta--tctgttaataaaagga i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1299592 584 - 10304083 ATTGACAAAAGTAAAACCTGATTGCAGATGGTACAGAGGCTGTGGCTCCTGGGGTGGGGGACAGTGATGAGGCAGCGGCACTCGTGCTGACCGCAGGGCCCTGAG-----------------CTGACCTCTCAGCAGGCTGCCCTGAGCCGCATCCCGGGGTCGTCAGCCGCCAGCAAGCTGGGAATGTGGAGAGAGAG------GCCTGACATCAATTTCCATCTGGTATTTCACTGGCATGGATATGAATGGATCAGGGATGAAAATAGAACGTTCTTCCTCTGGTTTGTTTATTTATGCAGCTGTTTGCCTTGG---GCCCCCTGGCAGGGGAGGAAC----------ACCATAACCTTTTGCTGCTTTAATCTTGTGGAGCTCTGAGTCTCGTACTG--TGAGGGCGCGG-----------------GAGGTCTCCGGTG-GCCATGAGGGTTTC--ATGCCC-GCGGTGTCCCTGTGGCTTT---CTGAGCCCC--TCTCATCCCCGGGGCACAGGCTTCAGGACCTCCAGCAGCTTCCATGGCATCTGAAACTCCCTTTTAACAGTGTCTGTTAAGGT-------TAAATGTA---------TTTGTGTTTTATTTGTTAA-------------------------------------------------TGATcagtcagctcttgatta--tatgttaataaaagga i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1370097 584 - 107702431 ATTGACAAAAGTAAAACCTGATTGCAGATGGTACAGAGGCTGTGGCTCCTGGGGTGGGGGACAGTGATGAGGCAGCAGCACTCGTGCTGACCACAGGGCCCTGAG-----------------CTGACCTCTCAGCAGGCTGCCCTGAGCCGCATCCCAGGGTCGTCAGCCACCAGCAAGCTGGGAATGTGGAGAGAGAG------GCTTGACATCAATTTCCATCTGGTATTTCACTGGCATGGATATGAATGGATCAGGGATGAAAATAGAACGTTCTTCCTCTGGTCTGCTTATTTATGCAGCTGTTTGCCTTGG---GCCCCCTGGCAGGGGAGGAAT----------ACCATAACCTTTTGCTGCTTTAATCTTGTGGAGCTCTGAGTCTCGTACTG--TGAGGGCGCGG-----------------GAGGTCTCCAGTG-GCCATGAGGGTTTC--GTGCCT-GTGGTGTCCCTGTGGCTTT---CTGAGCCCC--TCTCATCCCCAGGGCACAGGCTTCAGGACCTCCAGCAGCTTCCATGGCATCTGAAACACCCTTTTAACAGTGTCTGTTAAGGT-------TAAATGCA---------TTTGTGTTTTATTTGTTAA-------------------------------------------------TGATCAGTCAGCTCTTGATTA--TCTGTTAATAAAAGGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 849244 584 - 2200435 ATTGACAAAAGTAAAACCTGATTGCAGATGGTACAGAGGCTGTGGCTCCTGGGGTGGGGGACAGTGATGAGGCAGCGGCACTCGTGCTGACCGCAGGGCCCTGAG-----------------CTGACCTCTTAGCAGGCTGCCCTGAGCCGCATCCCGGGGTCCTCAGCCGCCAGCAAGCTGGTAATGTGGAGAGAGAG------GCTTGACATCAGTTTCCATCTGGTATTTCACTGGCATGGATGTGAATGGATCAGGGATGAAAATAGAACGTTCTTCCTCTGGTTTGTTTATTTATGCAGCTGTTTGCCTTGG---GCCCGCTGGCAGGGGAGGAGC----------ACCATAACCTTTTGCTGCTTTAATCTTGTGGAGCTCTGAGTCTCGTACTG--TGAGGGCGCGG-----------------GAGGTCTCCGGTG-GCCATGAGGGTTTC--ATGCCC-GCGGTGTCCCTGTGGCTTT---CTGAGCCCC--TCTCATCCCCGGGGCACAGGCTTCAGGACCTCCAGCAGCTTCCATGGCATCTGAAACACCCTTTTAACAGTGTCTGTTAAGGT-------TAAATGCA---------TTTGTGTTTTATTTGTTAA-------------------------------------------------TGATCAGTCAGCTCTTGATTA--TTGGTTAATAAAAGGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1287120 593 - 13651311 ATTGACAAAAGTAAAACCTGCTTGCAGATGGTACAGAGGCTGTGGCTCCTGGGGTGGGGGACAGTGATGAGGCAGCGGCACTCGTGCTGACCCCAGGGCCCTGAGCAGGC------AAGGCACTGACCTCTCAGCAGGCTGCCCTGAGCCGCATCC-AGGGTCATCAGCCACCAGCAAGCTGGGAATGTGGAGAGAGAG------GCTTGACATCAGTTTCCATCTGGTATTTCACTGGCATGGATGTGAATCGATCAGGGATGAAAATAGAACGTTCTTCCTCTGGTTTGTTTATTTATGCAGCTGTTTGCCTTGG---GCCCCCTGGCAGGGGAGGAGC----------CCCATAACCTTCTGCTGCTTTAATCTTGTGGAGCTCTGAGTCTCGTACTG--TGAGGGTGTGG-----------------GAGGCCTCTGGTG-GCCATGAGGCTTTC--ATGCCT-GCGGTGTCCCTGTGGCTTT---CTGAGCCCC--TCTCATCCCCGGGGCACAGGCTTCAGGACCTCCAGCAGCTTCCATGGCATCTGAAACACCCTTTTAACAGTGTCTGTTAAGGT-------TAAATGTT---------TTTG-GGTTTATTTGTTAA-------------------------------------------------TGATcagtcagctcttgatta--tctgttaataaaagga i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1302549 584 - 108792865 ATTGACAAAAGCAAATCCTGAATGCAG-CGGCATGGAGGCTGTGGCTCCTGGG-TGGGGGACAG-GGTGAGGCCGCAGCCCTAGTGCTGACCGCAAGCCCCTGAGCAGGC-------GGGCGCTGACCTCTCAGCAGGCTGCCCTGAGCCATGTCCCGGGATTGTCAGCCACCAACAAGGTGGGAACCCGGAGAGAGAG------GCTTGACATGAGTTTCCACCAGGTATTTCACTGGCGCGGATGTGGCC--ATCGGGGATGAAACTAGAACTTTCTTCCCCC-GTTTGTTTATGTATGCAGCGGTTTGCCTTGG---CTGCCGTGGCAGGGGAGGAGC----------GCTGTAACCTCCTGCTGCTTCAGTCTCGTGGAGCTCTGTGTCTCACCCTG--TGAGGGCGCCG-----------------GAGGTCTCCAGTG-GCCATAAGGGTTTC--ACGTCT-GGGGTGTCCCCAAGACCTT---CTGAGCCCT--GCTCATCCCTGGGGCACAGGCTTCAGGACCTCCAGCGGCTTCCGTGGCATCTGAAACACCCTTTTGACAGGGTCTGTTAAGGT-------TAAATGTA---------TTTGTGTTTTATTTGTTAA-------------------------------------------------TGACCAGTCAGCTC----TTA--GCTGTTAATAAAAGGA i calJac3.chr14 C 0 I 2 s cebCap1.NW_016107827v1 1241856 563 + 1864846 AATGACAAAAGCAAATCCTGAATGCAG-CAGCATGGAGGCTGTGGCTCCTGGG-TGCAGGACAGTGGTGAGGCCCCGGCCCTCGTGCTGACCGCAGGCCCCTGAGCAGGT-------GGGCACTGACCTCTCAGCAGGCTGCCCTGAGCCATGTCCCGGGGTCGTCAGCCACCAACAAGGTGGGAACCC-GAGAGAGGG------GCTTAACATGAGTTTCTATCTGGTATTTCACTTACGTGGATGTGGCC--ATCGGGGATGAAACTAGAACTTTCTCCCCCCGGTTTGTTTATGTATGCAGCTGTTTGCCTTGG---CTGCCGTGGCAGGGGAGGAGC----------ACCATAACCTCTTGCTGCTTCAGTCTCGTGGAGCTCTGAGTCTTACCCTG--TGAGGGCG------------------------------------CATGAGGGTTTC--GTGCCT-GGGGTGT--------CCTT---CTGAGCCCT--GCTCATGCCTGGGGCACAGCCTTCAGGACCTCCAGCGGCTTCTGTGGCATCTGAAACACCCTTTTGACAGAATCTGTTAAGGT-------TAAATGTA---------TTTGTGTTTTATTTGTTAA-------------------------------------------------TGATcagtcagctcttgatta--tctgttaatgaaagga i cebCap1.NW_016107827v1 C 0 I 40 s dasNov3.JH576208 1558932 695 + 4416731 -ATAATAAAATCAAAATCTGACTTTAAGCACTGTCAAAGGTGTTG-TCATAGGAGCTGTGACAGC-CCGTGATAGCAG---------TGACTATGAAACCCTTGGTTTGTGATAGAAAGCCACTTAC--TCTGTCATATTGCCCTGAGCAA-ATCCAGGAGGTACCAGTCCTCAACAAAGAAGGAATCCTGAAAGAGAGTGAGAAACTTGAAGTAATTTTAAATTTAGCATTCTGTTTGTATTGATAGGTCC--ATCATGGGGAAAGTTAGAACTTTGTTCCTTTGGtatattt---tatttatttatttaCTGTGGGGAGGGCTATGGCAGGAAAGGAGCTCCTCACCTTTCCACACCTTTTTGGTGGTTAAATCCTCTAAAACTCTTAACTTCATTCTGTCTGAGAGCACAGTAGACTCTATAGAAAACCAGATCACCAGCACATCATTCAGTTTTTTAATGCTTCAAGGCATTCTAATGGTTTCCAACAGAGCACCAATATTTCCTCCAGGGAAGATGCTTTGGAAAGCCTGACTGCTTACTTGATCTCTGAAATGTCTCTTGACAAGCCTTTGATAGGCTGTTTCAGTAAATTTAATTTTTttttttaagatttatttatttatttctctcccctccccccccaccctggttgtctgttctctgtgtctatttgctgtgtcttcttttgtctgcttctgttgttgatagtg i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1149002 1308 - 7082604 M e otoGar3.GL873658 882082 3282 + 5252280 I a score=46176.000000 s hg38.chr2_KI270774v1_alt 3654 12 + 223625 gcatcagtatca s panTro5.chr2A 1282672 12 + 111504155 GCATCAGTATCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1243432 12 + 114371477 GCATCAGTATCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1270529 12 + 1464242 ACATCAGTATCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1001771 12 + 81552678 GCATCAGTATCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1347069 12 + 108979918 gcatcagtatca i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1319248 12 - 111193037 gcatcagtatca i macFas5.chr13 C 0 I 3 s macNem1.NW_012011978v1 1347368 12 + 3644372 gcatcagtatca i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1300176 12 - 10304083 gcatcagtatca i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1370681 4 - 107702431 GCAT-------- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 849828 4 - 2200435 GCAT-------- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1287713 11 - 13651311 gcatcagtatc- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1303135 12 - 108792865 TCAGAAGTATCA i calJac3.chr14 I 2 C 0 s dasNov3.JH576208 1559627 12 + 4416731 gcatgggaatct i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1149002 1308 - 7082604 M e cebCap1.NW_016107827v1 1242419 40 + 1864846 I e otoGar3.GL873658 882082 3282 + 5252280 I a score=2574.000000 s hg38.chr2_KI270774v1_alt 3666 1 + 223625 g s panTro5.chr2A 1282684 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1243444 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1270541 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1001783 1 + 81552678 T i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1347081 1 + 108979918 g i rheMac8.chr13 C 0 C 0 s macNem1.NW_012011978v1 1347380 1 + 3644372 g i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1300188 1 - 10304083 g i cerAty1.NW_012000820v1 C 0 C 0 s calJac3.chr14 1303147 1 - 108792865 G i calJac3.chr14 C 0 C 0 s dasNov3.JH576208 1559639 1 + 4416731 g i dasNov3.JH576208 C 0 I 188 e saiBol1.JH378218 1149002 1308 - 7082604 M e cebCap1.NW_016107827v1 1242419 40 + 1864846 I e otoGar3.GL873658 882082 3282 + 5252280 I e colAng1.NW_012118821v1 1287724 0 - 13651311 C e manLeu1.NW_012103754v1 849832 0 - 2200435 C e chlSab2.chr14 1370685 0 - 107702431 C e macFas5.chr13 1319260 3 - 111193037 I a score=5828.000000 s hg38.chr2_KI270774v1_alt 3667 2 + 223625 gt s panTro5.chr2A 1282685 2 + 111504155 GT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1243445 2 + 114371477 GT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1270542 2 + 1464242 GT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1001784 2 + 81552678 GT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1347082 2 + 108979918 gt i rheMac8.chr13 C 0 C 0 s macNem1.NW_012011978v1 1347381 2 + 3644372 gt i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1300189 2 - 10304083 gt i cerAty1.NW_012000820v1 C 0 C 0 s calJac3.chr14 1303148 2 - 108792865 AT i calJac3.chr14 C 0 C 0 e saiBol1.JH378218 1149002 1308 - 7082604 M e cebCap1.NW_016107827v1 1242419 40 + 1864846 I e otoGar3.GL873658 882082 3282 + 5252280 I e dasNov3.JH576208 1559640 188 + 4416731 I e colAng1.NW_012118821v1 1287724 0 - 13651311 C e manLeu1.NW_012103754v1 849832 0 - 2200435 C e chlSab2.chr14 1370685 0 - 107702431 C e macFas5.chr13 1319260 3 - 111193037 I a score=32522.000000 s hg38.chr2_KI270774v1_alt 3669 23 + 223625 cacctaagacagAAAGGCCTGAA s panTro5.chr2A 1282687 23 + 111504155 CACCTAAGACAGAGAGGCCTGAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1243447 23 + 114371477 CACCTAAGACAGAGAGGCCTGAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1270544 23 + 1464242 CACCTAAGACAGAGAGCCTTGAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1001786 23 + 81552678 CACCTAAGACAGAGAGGCCTGAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1347084 13 + 108979918 cacctaagacaga---------- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1319263 23 - 111193037 cacctaagacagaggGGCTTGAA i macFas5.chr13 I 3 C 0 s macNem1.NW_012011978v1 1347383 13 + 3644372 cacctaagacaga---------- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1300191 13 - 10304083 cacctaagacaga---------- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1370685 6 - 107702431 ----CAGTAT------------- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 849832 6 - 2200435 ----CAGTAT------------- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1303150 23 - 108792865 AATGTAATACAGAGAGGCCCAAA i calJac3.chr14 C 0 C 0 e saiBol1.JH378218 1149002 1308 - 7082604 M e cebCap1.NW_016107827v1 1242419 40 + 1864846 I e otoGar3.GL873658 882082 3282 + 5252280 I e dasNov3.JH576208 1559640 188 + 4416731 I e colAng1.NW_012118821v1 1287724 0 - 13651311 C a score=31657.000000 s hg38.chr2_KI270774v1_alt 3692 36 + 223625 ATATGTTAGATTCACGTGG--------GACACAGGCTTTGAGAC------ s panTro5.chr2A 1282710 36 + 111504155 ATATGTTAGATTCACGTGG--------GACACAGGCTTTGAGAC------ i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1243470 36 + 114371477 ATATGTTAGATTCACGTGG--------GACACAGGCTTTGAGAC------ i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1270567 36 + 1464242 ATATGTTAGATTCACGTGG--------GACACAGGCTTTGAGAC------ i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1001809 15 + 81552678 ATATGTTACCTTCAC----------------------------------- i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1319286 36 - 111193037 ATATGTTAGATTCGCGTGG--------GACAGAGGCTTTGTGAC------ i macFas5.chr13 C 0 C 0 s calJac3.chr14 1303173 35 - 108792865 GTCTGTCAGATTCCTGT-G--------GAGGCAGCCTTTAAGAC------ i calJac3.chr14 C 0 I 275 s dasNov3.JH576208 1559828 50 + 4416731 atgggccagctccacacgggttgaggaggcccggggtttgaaccgcggac i dasNov3.JH576208 I 188 C 0 e saiBol1.JH378218 1149002 1308 - 7082604 M e cebCap1.NW_016107827v1 1242419 40 + 1864846 I e otoGar3.GL873658 882082 3282 + 5252280 I e colAng1.NW_012118821v1 1287724 0 - 13651311 C e manLeu1.NW_012103754v1 849838 0 - 2200435 C e chlSab2.chr14 1370691 0 - 107702431 C e cerAty1.NW_012000820v1 1300204 0 - 10304083 C e macNem1.NW_012011978v1 1347396 0 + 3644372 C e rheMac8.chr13 1347097 0 + 108979918 C a score=-7195.000000 s hg38.chr2_KI270774v1_alt 3728 6 + 223625 --------CAGTAT------------------------------------------------------- s panTro5.chr2A 1282746 6 + 111504155 --------CAGTAT------------------------------------------------------- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1243506 6 + 114371477 --------CAGTAT------------------------------------------------------- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1270603 6 + 1464242 --------CAGTAT------------------------------------------------------- i gorGor5.CYUI01015607v1 C 0 C 0 s macFas5.chr13 1319322 6 - 111193037 --------AGGCAT------------------------------------------------------- i macFas5.chr13 C 0 T 68 s dasNov3.JH576208 1559878 69 + 4416731 ctcccatgtggtagacggtcgccctaaccactgggccaagtccgccaccaaatttaatttttttAATGC i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1149002 1308 - 7082604 M e cebCap1.NW_016107827v1 1242419 40 + 1864846 I e otoGar3.GL873658 882082 3282 + 5252280 I e calJac3.chr14 1303208 275 - 108792865 I e colAng1.NW_012118821v1 1287724 0 - 13651311 C e manLeu1.NW_012103754v1 849838 0 - 2200435 C e chlSab2.chr14 1370691 0 - 107702431 C e cerAty1.NW_012000820v1 1300204 0 - 10304083 C e macNem1.NW_012011978v1 1347396 0 + 3644372 C e rheMac8.chr13 1347097 0 + 108979918 C e nomLeu3.chr19 1001824 0 + 81552678 C a score=3652.000000 s hg38.chr2_KI270774v1_alt 3734 2 + 223625 CA s panTro5.chr2A 1282752 2 + 111504155 CA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1243512 2 + 114371477 CA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1270609 2 + 1464242 CA i gorGor5.CYUI01015607v1 C 0 C 0 s chlSab2.chr14 1370691 2 - 107702431 CA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 849838 2 - 2200435 CA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1287724 1 - 13651311 -a i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1559947 2 + 4416731 TA i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1149002 1308 - 7082604 M e cebCap1.NW_016107827v1 1242419 40 + 1864846 I e otoGar3.GL873658 882082 3282 + 5252280 I e calJac3.chr14 1303208 275 - 108792865 I e cerAty1.NW_012000820v1 1300204 0 - 10304083 C e macNem1.NW_012011978v1 1347396 0 + 3644372 C e macFas5.chr13 1319328 68 - 111193037 T e rheMac8.chr13 1347097 0 + 108979918 C e nomLeu3.chr19 1001824 0 + 81552678 C a score=121553.000000 s hg38.chr2_KI270774v1_alt 3736 41 + 223625 -----------GGTCACCT---------AAGACAGAGAGGCTTGAAATATGTTAGATTCAG s panTro5.chr2A 1282754 41 + 111504155 -----------GGTCACTT---------AAGACAGAGAGGCTTGAAATATGTTCGATTCAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1243514 41 + 114371477 -----------GGTCACTT---------AAGACAGAGAGGCTTGAAATATGTTCGATTCAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1270611 41 + 1464242 -----------GGTCACCT---------AAGACAGAGAGGCTTGAAATATGTTAGATTCAG i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1347097 25 + 108979918 ------------------------------------ggGGCTTGAAATATGTTAGATTCGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1319260 41 - 111193037 -----------ggtcacct---------aagacagaggGGCTTGAAATATGTTAGATTCGC i macFas5.chr13 T 68 C 0 s macNem1.NW_012011978v1 1347396 25 + 3644372 ------------------------------------ggGGCTTGAAATATGTTAGATTCGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1300204 25 - 10304083 ------------------------------------ggGGCTTGAAATATGTTAGATTCAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1370693 41 - 107702431 -----------GGTCACCT---------AAGACAGAGGGGCTTGAAATATGTTAGATTCGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 849840 41 - 2200435 -----------GGTCACCT---------AAGACAGAGGGGCTTGAAATATGTTAGATTCAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1287725 41 - 13651311 -----------ggtcacct---------aagacagaggGGCTTGAAATATGTTAGATTCAC i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1559949 61 + 4416731 agtcagcttttggttagctgtgctaataaagggaaagaggcactgaataatctaaacacag i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1149002 1308 - 7082604 M e cebCap1.NW_016107827v1 1242419 40 + 1864846 I e otoGar3.GL873658 882082 3282 + 5252280 I e calJac3.chr14 1303208 275 - 108792865 I e nomLeu3.chr19 1001824 0 + 81552678 C a score=16419.000000 s hg38.chr2_KI270774v1_alt 3777 3 + 223625 -GTG s panTro5.chr2A 1282795 3 + 111504155 -GTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1243555 3 + 114371477 -GTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1270652 3 + 1464242 -GTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1001824 3 + 81552678 -GTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1347122 3 + 108979918 -GTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1319301 3 - 111193037 -GTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1347421 3 + 3644372 -GTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1300229 3 - 10304083 -GTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1370734 3 - 107702431 -GTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 849881 3 - 2200435 -GTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1287766 3 - 13651311 -GTG i colAng1.NW_012118821v1 C 0 C 0 s cebCap1.NW_016107827v1 1242459 3 + 1864846 -GTG i cebCap1.NW_016107827v1 I 40 C 0 s dasNov3.JH576208 1560010 3 + 4416731 ttt- i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1149002 1308 - 7082604 M e otoGar3.GL873658 882082 3282 + 5252280 I e calJac3.chr14 1303208 275 - 108792865 I a score=978196.000000 s hg38.chr2_KI270774v1_alt 3780 141 + 223625 GGACACA---------------------GGCTTTGAGACCGGCATCGCTGCCTTGTGATGCTTTGTTTGGATTGCATCTA-TTTCCATCGTGGGTTGGTG-GAAAAGAGAACG--CCCCAGGGAGTTACAGAGGCCAcagggatggataccagattcgtaggactt s panTro5.chr2A 1282798 141 + 111504155 GGACACA---------------------GGCTTTGAGACCGGCATCGCTGCCTTGTGATGCTTTGTTTGGATTGCATCTA-TTTCCATCGTGGGTTGTTG-GAAAAGAGAACG--CCCCAGGGAGTTACAGAGGCCAcagggatggataccagattcgtaggactt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1243558 141 + 114371477 GGACACA---------------------GGCTTTGAGACCGGCATCGCTGCCTTGTGATGCTTTGTTTGGATTGCATCTA-TTTCCATCGTGGGTTGGTG-GAAAAGAGAACG--CCCCAGGGAGTTACAGAGGCCACAGGGATGGATACCAGATTCGTAGGACTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1270655 141 + 1464242 GGACACA---------------------GGCTTTGAGACCGGCATCGCTGCCTTGTGATGCTTTGTTTGGATTGCATCTG-TTTCCATCGTGGGTTGGTG-GAAAAGAGAACG--CCCCAGGGAGTTACAGAGGCCAcagggatggataccagattcgtaggactt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1001827 141 + 81552678 GGACACA---------------------GGCTTTGAGACAGGCATCGCTGCCTTGTGATGCTTTGTTTGGATTGCACCTA-TTTCCATCGTGGGTTGGTG-GAAAAGAGAATG--CTCCAGGGAGTTACAGAGGCCATagggatggataccggattcgtaggactt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1347125 141 + 108979918 GGACAGA---------------------GGCTTTGTGACAGGCATGGCTGCCTTGTGCTGCTGTGTTTGGATCCTACGTA-TTTCCATCGTGGGTGGGTG-GAAAGGAGAACG--CCCCAGGGAGTTCCAGAGGCCAcagggatagacgccagattcgtagggctt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1319304 141 - 111193037 GGACAGA---------------------GGCTTTGTGACAGGCATGGCTGCCTTGTGCTGCTGTGTTTGGATCCTACGTA-TTTCCATCGTGGGTGGGTG-GAAAGGAGAACG--CCCCAGGGAGTTCCAGAGGCCAcagggatagacgccagattcgtagggctt i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1347424 141 + 3644372 GGACAGA---------------------GGCTTTGTGACAGGCATGGCTGCCTTGTGCTGCTGTGTTTGGATCCTACGTA-TTTCCATCGTGGGTGGGTG-GAAAGGAGAACG--CCCCAGGGAGTTCCAGAGGCCAcagggatagacgccagattcatagggctt i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1300232 141 - 10304083 GGACAGA---------------------GGCTTTGTGACAGGCATGGCTGCCTTGTGCTGCTGTGTTTGGATCCTACCTA-TTTCCATCGTGGGTGGGTG-GAAAGGAGAACG--CCCCAGGCAGTTCCAGAGGCCAcagggatggacgccagattcgtagggctt i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1370737 141 - 107702431 GGACAGA---------------------GGCTTTGTGACAGGCGTGGCTGCCTTGTGCTGCTGTGTTTGGATCCTACGTA-TTTCCATCGTGGGTGGGTG-GAAAGGAGAACG--CCCCAGGGAGTTCCAGAGGCCACAGGGATGGACTTGAGGTTTTTTGGGCTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 849884 141 - 2200435 GGACAGA---------------------GGCTTTGCGACAGGCGTGGCTGCCTTGTGCTGCTGTGTTTGGATCATACGTA-TTTCCACCGTGGGTTGGTG-GAAAGGAGAACG--CCCCAGGCAGTTCCAGAGGCCACAGGGATGGATGCCAGATTCGTAGGGCTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1287769 140 - 13651311 GGACAAA---------------------GGCTCTGCGACAGGCGTGGCTGCCTTGTGCTGCTGTGTTTGGATC-TACCTA-TTTCCATCGTGGGTGGGTG-GAAAGGAGAATG--CCTCAGGGAGTTCCAAAGGCCAcagggatggacgccagattcgtagggctt i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1303483 143 - 108792865 GGACACA---------------------ACCTTTGAGACTGATGCCCTTGCCTTGCGATGCTTGGTTTGGATTGCACCCA-CTTCCATCTTGAGTTGGTG-GAAAAGAGAAAGACACCCAGGAAGTTCCAGAGGCCACAGGGATGGGTACCGTATTTGTAGGGCTT i calJac3.chr14 I 275 I 1305 s cebCap1.NW_016107827v1 1242462 141 + 1864846 GGACACA---------------------GCCTTTGAGACCGACACCCTGGCCTTGTGATGCTTGGTTTGGATTGCACCCA-CTTCCATCTTGAGTCGGTG-GAAAACAGAAAG--CCCCAAGGAGTTCCAGAGGCCAcagggatgggtaccgtatttgtagggctt i cebCap1.NW_016107827v1 C 0 C 0 s dasNov3.JH576208 1560013 164 + 4416731 tgacatatataacaatcttttgtgtatctgttttgaaacagacttaatttctttgcggTGCTTTGTTTAGACTGTATTCGTTTTCTGTTTTCAATTGATGAGGAAAAAAAGAG--CCTTAAAACATCATAGTGGCCAcaggagcagacacacgtgttgcagaactt i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1149002 1308 - 7082604 M e otoGar3.GL873658 882082 3282 + 5252280 I a score=1383852.000000 s hg38.chr2_KI270774v1_alt 3921 217 + 223625 gtagtttaaacaatttgtggaaat-tttttatg---aaaaaaaaat-gtaaaactgcaaatacagcaacctagctacacttagaaatgagtgtagggcacataaatatgtcccaacaaacccaaactaaaaaaacctccacct---ccatttccc-gtgctggatctcagagccgcccaaggcccctc---cgtggcacccctgggatgag-------agggagGAACTTGGGTAG s panTro5.chr2A 1282939 217 + 111504155 gtagtttaaacaatttttgggaat-tttttatg---aaaaaaaa-t-gtaaaactgcaaatacagcaacctagctacactgagaaatgagtgtagggcacataaatatgtcccaacaaacccaaactaaaaaaacctccacct---ccatttccccgtgctggatctcagagccacccaaggcccctc---cgtggcacccctgggatgac-------agggaggaacttgggtag i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1243699 218 + 114371477 GTAGTTTAAACAATTTTTGGGAAT-TTTTTATG---AAAAAAAAAT-GTAAAACTGCAAATAcagcaacctagctacactgagaaatgagtgtagggcacataaatatgtcccaacaaacccaaactaaaaaaacctccacct---ccatttccccgtgctggatctcagagccacccaaggcccctc---cgtggcacccctgggatgag-------agggaggaacttgggtag i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1270796 217 + 1464242 gtagtttaaacaatttgtgggaa--tttttatg---aaaaaataat-gtaaaactgcaaatacagcaacctagctacacttagaaatgagtgtagggcacataagtatgtcccaacaaacccaaactaaaaaaacctccacct---ccatttccctgcgctggatctcagagccgcccaaggcccctc---cgtggcacccctgggatgag-------agggaggaacttgggtag i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1001968 215 + 81552678 gtagtttaaacaattttggggaat-agtttatg---aaaaaaaa-a-gtaaaactgcaaatacagcaacctagct--acttagaaatgagtgtggggcacataaatatgtcccaacaaacccaaactaaaaaaacctccacct---ccatttccccacgctggatctcagagctgcccaaggcccctc---cgtggcatccctgggatgag-------agggaggaacttgggtag i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1347266 218 + 108979918 gaagcttaaataattcatgggaat-tttttatg---gaaaaaaaaa-gtaaaactgcaaatacagcaacctagctacacttagaaatgagtgtggggcacattaatatgtccctacaaacccaaactaaaaaaccctccacct---ctatttccccacaccggatctcagagccacccaaggcccctc---cgtggcacccctggggcgag-------agggaggaacttgggtag i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1319445 218 - 111193037 gaagcttaaataattcatgggaat-tttttatg---gaaaaaaaaa-gtaaaactgcaaatacagcaacctagctacacttagaaatgagtgtggggcacattaatatgtccctacaaacccaaactaaaaaaccctccacct---ccatttccccacaccggatctcagagccacccaaggcccctc---cgtggcacccctggggcgag-------agggaggaacttgggtag i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1347565 218 + 3644372 gaagcttaaataattcatgggaat-tttttatg---gaaaaaaaaa-gtaaaactgcaaatacagcaacctagctacacttagaaatgagtgtggggcacattaatatgtccctacaaacccaaactaaaaaaccctccacct---ccatttccccacaccggatctcagagccacccaaggcccctc---cgtggcacccctggggcgag-------agggaggaacttgggtag i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1300373 221 - 10304083 gaagtttaaacaattcatgggaat-tttttatgaaaaaaaaaaaaa-gtaaaactgcaaatacagcaacctagctacacttagaaatgagtgtggggcacattaatatgtccctataaacccaaactaaaaaaccctccacct---ccatttccccacaccggatctcagagccacccaaggcccccc---cgtggcacccctggggcgag-------agggagGAACTTGGGTAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1370878 219 - 107702431 GAGGTTTAAACAATTCATGGGAAA-TTTTTATG---GAAAAAAAAATGTAAAACTGCAAATACGGCaacctagctacacttagaaatgagtgtggggcacattaatatgtccctacaaacccaaactaaaaaaccctccatct---ccatttgcccacaccggatctcagagccacccaaggcccctc---cgtggcacccctggggcgag-------agggagGAACTTGGGTAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 850025 219 - 2200435 GAAGTTTCAACAATTCATGGGAAT-TTTTTATG---AAAAAAAAAAAGTAAAACTGCAAATAcagcaacctagctacacttagaaatgagtgtggggcacattaatatgtccctacaaacccaaactaaaaaaccctccacct---ccatttccccacaccggatctcagagccacccaaggcccctc---cgtggcacccctggggcgag-------agggagGAACTTGGGTAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1287909 204 - 13651311 gaagtttaaacaattcatgggaat-atttcatg---aaacaaaaaatgtaaaactgcaaatacagcaacctagctacacttagaaatgaatgtGGGGCACATTAATATGTCCCTACAAA---------------CCTCCACCT---CCATTTCCCCACACCGGATCTCAGAGCCACCCAAGGCCTCTC---TGTGGCATCTCTGGGGCGAG-------AGGGAGGAACTGGGGTAG i colAng1.NW_012118821v1 C 0 C 0 s cebCap1.NW_016107827v1 1242603 214 + 1864846 gaactttaaacaatttgtggggat-tttttatg---aaaaaaaa-t-gtaaaactgcaaatacagcaacctaactatacttagaaatgagtgt-gggcacataaatatgtcccaaaaaacccaaactgaaaaaacc-ccacct---ccatttccctgcactggatctcagagccacccaaggccccac---agtggcaccgct-ggacgag-------agggaggaacttgagtag i cebCap1.NW_016107827v1 C 0 C 0 s dasNov3.JH576208 1560177 229 + 4416731 gaagcttaaaccatcgatcaagttgtctttaag---aaacaaaaat-tgaaaattgcaaatataataaattg---acatacagaaatgagtgtgaaatacataaatatatcccaccaaatccaaacaaagcatatatccgacttaactctcccccttcaccagatcccaaacatgcttaagggctcgcaaacactaccccacaggaaggaagtcagctggtggggaaactgagggg i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1149002 1308 - 7082604 M e otoGar3.GL873658 882082 3282 + 5252280 I e calJac3.chr14 1303626 1305 - 108792865 I a score=29360.000000 s hg38.chr2_KI270774v1_alt 4138 5 + 223625 ACAGA s panTro5.chr2A 1283156 5 + 111504155 agaga i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1243917 5 + 114371477 agaga i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1271013 5 + 1464242 agaga i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1002183 5 + 81552678 agaga i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1347484 5 + 108979918 agaga i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1319663 5 - 111193037 agaga i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1347783 5 + 3644372 agaga i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1300594 5 - 10304083 AGACA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1371097 5 - 107702431 AGACA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 850244 5 - 2200435 AGACA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1288113 5 - 13651311 AGACA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1304931 5 - 108792865 ACAGG i calJac3.chr14 I 1305 C 0 s cebCap1.NW_016107827v1 1242817 5 + 1864846 aaaga i cebCap1.NW_016107827v1 C 0 C 0 s dasNov3.JH576208 1560406 5 + 4416731 aaaga i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1149002 1308 - 7082604 M e otoGar3.GL873658 882082 3282 + 5252280 I a score=218973.000000 s hg38.chr2_KI270774v1_alt 4143 27 + 223625 GGTAGG-G------------ACCTCACAAGAGCAGTGACC s panTro5.chr2A 1283161 27 + 111504155 ggtagg-g------------acctcaCAAGAGCAGTGACC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1243922 27 + 114371477 ggtagg-g------------acctcaCAAGAGCAGTGACC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1271018 27 + 1464242 ggtagg-g------------acctcaCAAGAGCAGTGACC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1002188 27 + 81552678 ggcagg-g------------acctcaCAAGAGCAGTGACC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1347489 27 + 108979918 ggcagg-g------------acctcaCAAGAGCAGTGACC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1319668 27 - 111193037 ggcagg-g------------acctcaCAAGAGCAGTGACC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1347788 27 + 3644372 ggcagg-g------------acctcaCAAGAGCAGTGACC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1300599 27 - 10304083 GGCAGG-G------------ACCTCACAAGAGCAGTGACC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1371102 27 - 107702431 GTCAAG-G------------ACCTCACAAGAGCAGTGACC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 850249 27 - 2200435 GGCAGG-G------------ACCTCACAAGAGCAGTGACC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1288118 27 - 13651311 GGCAGG-G------------ACCTGACAAGAGCAGCGACC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1304936 27 - 108792865 AGCAGG-G------------ACCTCACAGGAGCAGGGACC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1150349 27 - 7082604 GGCAGG-G------------AGCTCACAGGAGCAGGGACT i saiBol1.JH378218 M 1308 C 0 s cebCap1.NW_016107827v1 1242822 28 + 1864846 gGAAGGTG------------ACCTCACAGGAGCAGGGACC i cebCap1.NW_016107827v1 C 0 I 1049 s dasNov3.JH576208 1560411 35 + 4416731 --aaga-gaagttttagttcatcgcaggaaaataagga-- i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 882082 3282 + 5252280 I a score=195545.000000 s hg38.chr2_KI270774v1_alt 4170 33 + 223625 CGAGGGCCCTGGGCACGTCGCTTGGGCCCCTCA s panTro5.chr2A 1283188 33 + 111504155 CGAGGGCCCTGGGCACATCGCTTGGGCCCCTCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1243949 33 + 114371477 CGAGGGCCCTGGGCACATCGCTTGGGCCCCTCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1271045 33 + 1464242 CGAGGGCCCTGGGCATGTCACTTCGGCCCCTCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1002215 33 + 81552678 CGAGGGCCCTGGGCACGTCGCTTGGGCCCCTCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1347516 33 + 108979918 CAAAGGCCCTGGGCATGTCACTCGCGCCCCCCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1319695 33 - 111193037 CAAAGGCCCTGGGCATGTCGCTCGCGCCCCCCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1347815 33 + 3644372 CAAAGGCCCTGGGCATGTCGCTCGCGCCCCCCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1300626 33 - 10304083 CAAAGGCCCTGGGCACGTCGCTCGCAGCCCCCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1371129 33 - 107702431 CGAAGGCCCTGGGCACGTCGCTTGGGTCCCCCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 850276 33 - 2200435 CGAAGGCCCTGGGCACGTCGCTCGCACCCCCCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1288145 33 - 13651311 CGAAGGCCCTGGGCCTGTCGCTCGGGCCCCCCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1304963 33 - 108792865 GGAGGGTCCTGGTCATGTCACTGGGGCCCACCA i calJac3.chr14 C 0 I 65 s saiBol1.JH378218 1150376 30 - 7082604 -CAGGGCCCTGG-CATGTCACTGGGTTCCACC- i saiBol1.JH378218 C 0 C 0 s dasNov3.JH576208 1560446 28 + 4416731 caagg----tgaactccttgctgtggcccctc- i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1242850 1049 + 1864846 I e otoGar3.GL873658 882082 3282 + 5252280 I a score=6228.000000 s hg38.chr2_KI270774v1_alt 4203 1 + 223625 G s panTro5.chr2A 1283221 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1243982 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1271078 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1002248 1 + 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1347549 1 + 108979918 G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1319728 1 - 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1347848 1 + 3644372 G i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1300659 1 - 10304083 G i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1371162 1 - 107702431 G i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 850309 1 - 2200435 G i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1288178 1 - 13651311 G i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1150406 1 - 7082604 A i saiBol1.JH378218 C 0 C 0 e cebCap1.NW_016107827v1 1242850 1049 + 1864846 I e otoGar3.GL873658 882082 3282 + 5252280 I e dasNov3.JH576208 1560474 0 + 4416731 C e calJac3.chr14 1304996 65 - 108792865 I a score=161467.000000 s hg38.chr2_KI270774v1_alt 4204 22 + 223625 CTCCCTGGGCTCTGTGCAGGCA s panTro5.chr2A 1283222 22 + 111504155 CTCCCTGGGCTCTGTGCAGGCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1243983 22 + 114371477 CTCCCTGGGCTCTGTGCAGGCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1271079 22 + 1464242 CTCCCTGGGCTCTGTGCAGGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1002249 22 + 81552678 CTCCCTGGGCTCTGTGCAGGCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1347550 22 + 108979918 CTCCCTGGGCTCTGTGCAGTCG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1319729 22 - 111193037 CTCCCTGGGCTCTGTGCAGTCG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1347849 22 + 3644372 CTCCCTGGGCTCTGTGCAGTGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1300660 22 - 10304083 CTCCCTGGACTCTGTGCAGTCG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1371163 22 - 107702431 CTCCCTGGGCTCTGTGCAGTCG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 850310 22 - 2200435 CTCCCTGGGCTCTGTGCAGTCG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1288179 22 - 13651311 CTCCCTGGGCTCTGTGCAGTCG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1305061 22 - 108792865 CAGCCTGGGCTCTGTGCAGGTG i calJac3.chr14 I 65 C 0 s saiBol1.JH378218 1150407 22 - 7082604 CGGCCTGGGCTCTGTGCAGGTG i saiBol1.JH378218 C 0 C 0 s dasNov3.JH576208 1560474 17 + 4416731 ---ccaaggcct--tgaaggca i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1242850 1049 + 1864846 I e otoGar3.GL873658 882082 3282 + 5252280 I a score=175361.000000 s hg38.chr2_KI270774v1_alt 4226 34 + 223625 -----AGGGCCTCACAGCTTACACAGGAAGAAGA-----------GGGGA s panTro5.chr2A 1283244 34 + 111504155 -----AGGGCCTCACAGCTTACACAGGAAGAAGA-----------GGGGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1244005 34 + 114371477 -----AGGGCCTCACAGCTTACACAGGAAGAAGA-----------GGGGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1271101 34 + 1464242 -----AGGGCCTCACAGCTTACACAGGAAGAAGA-----------GGGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1002271 34 + 81552678 -----AGGGTCTCACAGCTTACACAGGAAGAAGA-----------GGGGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1347572 34 + 108979918 -----AGGGCCTCACAGCTTACACAGGAAGAAGA-----------GGGGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1319751 34 - 111193037 -----AGGGCCTCACAGCTTACACAGGAAGAAGA-----------GGGGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1347871 34 + 3644372 -----AGGGCCTCACAGCTTACACAGGAAGAAGA-----------GGGGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1300682 34 - 10304083 -----AGGGCCTCACAGCTTACACAGGAAGAAGA-----------GAGGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1371185 34 - 107702431 -----AGGGCCTCACAGCTTACACAGGAAGAAGA-----------GGGGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 850332 34 - 2200435 -----AGGGCCTCACAGCTTACGCAGGAAGAAGA-----------GGGGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1288201 35 - 13651311 -----AGGACCTCCCAGCTCACACAGGAAGAAGGC----------GGGGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1305083 7 - 108792865 -----AGGGCCC-------------------------------------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1150429 7 - 7082604 -----AGGGCCT-------------------------------------- i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 885364 26 + 5252280 -----AGGGCCCCGAGGCTTAACCAAGATAA------------------- i otoGar3.GL873658 I 3282 C 0 s dasNov3.JH576208 1560491 50 + 4416731 aatgaggggtcacagagcttaaacATAATAAAGTTCTGTGGCAGGAAGGA i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1242850 1049 + 1864846 I a score=1054837.000000 s hg38.chr2_KI270774v1_alt 4260 134 + 223625 CACAGATGAGGATGACAGCA-TTTCCCACCTTATCCCACAGAGTAGGAAACACATATGTGGATAACTGCAAACACTTA----------------GTGCATGGGTGATGGGTGACCGTGGGCATTTTCAGAAGTCACCTTCACACACTGAGG s panTro5.chr2A 1283278 134 + 111504155 CACAGATGAGGATGACAGCA-TTTCCCACCTTATCCCACAGAGTAGGAAACACATATGTGGATAACTGCAAACACTTA----------------GTGCATGGGTGATGGGTGACCGTGGGCATTTTCAGAAGTCACCTTCACACACTGAGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1244039 134 + 114371477 CACAGATGAGGATGACAGCA-TTTCCCACCTTATCCCACAGAGTAGGAAACACATATGTGGATAACTGCAAACACTTA----------------GTGCATGGGTGATGGGTGACCGTGGGCATTTTCAGAAGTCACCTTCACACACTGAGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1271135 134 + 1464242 CACAGATGAGGATGACAGCA-TTTCCCACCTTATCCCACAGAGTAGGAAACACATATGTGGATAACTGCAAACACTTA----------------GTGCATGGGTGATGGGTGACCGTGGGCATTTTCAGAAGTCACCTTCACACACTGAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1002305 124 + 81552678 CACAGAAGAGGATGACAGCA--TTCCCACCTTATGCCACAGAGTAGGAAACAC--ATGTGGATAACTGCAAACACTTA----------------GTGC-------GTGGGTGGCCGTGGGCATTTTCAGAAGTCACCTTCACACACTGAGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1347606 127 + 108979918 CACAGACGAGGATGACAGCA-TTTCCCACCTTATCCCACAGAATAGGAAACAGACATGTGGATGACTGCAAACACTTA----------------GTGC-------ATGGGTGGCCGTGGGCATTTTCAGAAGTCACCTCCACACACTGAGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1319785 127 - 111193037 CACAGACGAGGATGACAGCA-TTTCCCACCTTATCCCACAGAATAGGAAACAGACATGTGGATGACTGCAAACACTTA----------------GTGC-------ATGGGTGGCCGTGGGCATTTTCAGAAGTCACCTCCACACACTGAGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1347905 127 + 3644372 CACAGACGAGGATGACAGCA-TTTCCCACCTTATCCCACAGAATAGGAAACAGACATGTGGATGACTGCAAACACTTA----------------GTGC-------ATGGGTGGCCGTGGGCATTTTCAGACGTCACCTCCACACACTGAGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1300716 143 - 10304083 CACAGACGAGGATGACAGCA-TTTCCCACCTCATCCCACAGAGCAGGAAACAGACATGTGGATGACTGCAAACACTTAGTGCATGGGTGGCTGTGTGC-------ATGGGTGGCCGTGGGCATTTTCAGAAGTCACCTCCACACACTGAGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1371219 127 - 107702431 CGCAGACAAGGATGACAGCG-TTTCCCACCTTATCCCACAGAGCAGGAAGCAGACATGTGGATGACCGCAAACACTTA----------------GTGC-------ATGGGTGGCCGTGGGCGTTTTCAGAAGTCACCTCCGCACACTGAGG i chlSab2.chr14 C 0 I 251 s manLeu1.NW_012103754v1 850366 127 - 2200435 CACAGACGAGGATGACAGCA-TTTCCCACCTCATCCCACAGAGCAGGAAACAGACATGTGGATGACTGCAAACACTTA----------------GTGC-------ATGGGTGGCCGTGGGCATTTTCAGAAGTCACCTCCACACACTGAGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1288236 127 - 13651311 CACAGACGAGGATGACAGCG-TTTCCCACCTCATCCCACAGAGCAGGAAACAGACATGTGGATGACTGCAAACACTTA----------------GCGC-------GTGGGAGGCCGTGGGCACTTTCCAAAGTCACCTCCACACACTGAGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1305090 113 - 108792865 CACAGATGAGAAGGACAGCA-TTTCCCACACTGTCCCACAGAGCAGGAAACACACGTGTGGATAAC-----------------------------TGC-------ATGGGTGGCCGTGGGTGTTTTCAGAAGTCA-CGTCACACACTGAGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1150436 127 - 7082604 CACAGATGAGGAGGACAGCA-TTTCCCACACTGTCCCACAGAGCAGGAAACACACATGTGGATAACTGCAGACACTTC----------------ATGC-------ATGGGTGGCCGTGGGTGTTTACAGAAGTCACCGTCACACACTGAGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1243899 123 + 1864846 CACAGATGAGGAGGACAGCA-TTTCCCATGCTGTCCCACAAAGCAGGAAACAC----GTGGATAACTGCAGACACTTC----------------ATGC-------ATGGGTGGCCGTGGGTGTTTCCGGAAGTCACCATCACATACTGAGG i cebCap1.NW_016107827v1 I 1049 C 0 s otoGar3.GL873658 885390 103 + 5252280 ------TGAGGAC-ACAATA-CTGTCCACATTATCCCAT-GACTGGAAAACACAGGTGTGGATGAGTATAAGTGCGCA----------------GCAC-------ATGA----------------TCACAGCACCATCTCACAAGCTGAGG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1560541 127 + 4416731 TTCAAATTAGGATAAAAGCAATTTGCCACATTATTTCATAGAGTAGGTGACATGCGTGCAGATAACCATAGATAAACA----------------GCAC-------ATGCCCTGCAGCAGCCTTTTAC-GAAACTGGGATTATAAATTCAAA i dasNov3.JH576208 C 0 C 0 a score=509761.000000 s hg38.chr2_KI270774v1_alt 4394 69 + 223625 TTGTGCATTTAT---CAACGTATGAGATATACAGAAAGTTAGAACATGGCAGCTGGGAAAT-----------GAAAACTCTAG s panTro5.chr2A 1283412 69 + 111504155 TTGTGCATTTAT---CAACGTATGAGATATACAGAAAGTTAGAACATGGCAGCTGGGAAAT-----------GAAAACTCTAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1244173 69 + 114371477 TTGTGCATTTAT---CAACGTATGAGATATACAGAAAGTTAGAACATGGCAGCTGGGAAAT-----------GAAAACTCTAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1271269 69 + 1464242 TTGTGCATTTTT---CAACGTATGAGATATACTGAAAGTGAGAACATGGCAGCTGGGAAAT-----------GAAAACTCCAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1002429 69 + 81552678 TTCTGCATTTAT---CAACGTATGAGATATACTGAAAGTTAGAACATGGCGGCTGGGAAAT-----------GAAAACTCTAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1347733 69 + 108979918 TTCTGCAGTTGT---CAATATATGAGATATATGGAAAGTTAGAACACGGCGGCTGGGAAAT-----------GAAAACTATAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1319912 69 - 111193037 TTCTGCAGTTGT---CAATATATGAGATATATGGAAAGTTAGAACACGGCGGCTGGGAAAT-----------GAAAACTATAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1348032 69 + 3644372 TTCTGCAGTTGT---CAATATATGAGATATATGGAAAGTTAGAACATGGCGGCTGGGAAAT-----------GAAAACTATAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1300859 69 - 10304083 TTCTGCACTTGT---CAACATAAGAGATATACGGAAAGTTAGAACACGGCGGCTGGGAAAT-----------GAAAACTCTAG i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 850493 69 - 2200435 TTCTGCAGTTGT---CAACATATGAGACATACGGAAAGTTAGAACATGGCGGCTGGGAAAT-----------GAAAACTCTAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1288363 69 - 13651311 GTCTGCACTTGT---CAACATACGAGATGTACAGAAAGTTAGAACACGGCAGCTGGGAAGT-----------GAAAACTCTAG i colAng1.NW_012118821v1 C 0 I 367 s calJac3.chr14 1305203 66 - 108792865 TTCTGCATTTAT---CGACATATAAGA-ATAAAGAAAGTTGGAACATGACAGCTGGGAAAT-----------GAAAA--CTGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1150563 69 - 7082604 CTCTGCATTTAT---CAACGTATGAGATATAAAGAAAGTTGGAACATGACAGCTGGGAAAT-----------GAAAACTCTGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1244022 69 + 1864846 TTCTCCATTTAT---CAATGTATGAGATATAAAGAAAGTTGGAACATGACAGCTGGGAAAT-----------GAAAACTCTGG i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 885493 75 + 5252280 TTCCATATTTAC-TACGGCGTGTGAGATAATGAAGAAGTCAGAACATGATGACCTGGAAATCCAG-------GAAAATTCTTG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1560668 80 + 4416731 TTCTGCATCTTAGTATAGCTTCTGAGATACACAAAAAGTTAGAAAA---CAGCCGTGGAATCTAGAGTCGGTGAAAATTCTTG i dasNov3.JH576208 C 0 C 0 e chlSab2.chr14 1371346 251 - 107702431 I a score=2965367.000000 s hg38.chr2_KI270774v1_alt 4463 368 + 223625 AAGCTAATGCAAGAC----TT--AAGGAGTCCACGGGAATGAATTCTGAGTTGAAACTCATAGCTATTGCAAAT-----------------CTTGGATGTTA------------------GCAATATGTTGTCTTAAGAAAT----AGGAACATTTTATTATCTCAATACATCAATTAACCAGGAGTGCCAGAGAAAACAATATTCCTAGTAAGTTGATTTTCTAGTGAAATGAGTGGTAACCATGAAACAAGTTTCCTTTTAGTAGTTGTTGAAAATATTTCTGGAATATTCTACCAGGACGCTACCTTAGTAATTAGTGCATGATGGGAACACTTGAGTTTCTCCTGAAATCT-AGGG----AGGAGTTCTGGGGC--TTGGGGAG-----CAGAGTGAAAT----ATTCCTACCATCCATTATTTG s panTro5.chr2A 1283481 368 + 111504155 AAGCTAATGCAAGAC----TT--AAGGAGTCCACGGGAATGAATTCTGAGTTGAAACTCATAGCTATTGCAAAT-----------------CTTGGATGTTA------------------GCAATATGTTGTCTTAAGAAAT----AGGAACATTTTATTATCTCAATACATCAATTAACCAGGAGTGCCAGAGAAAACAATATTCCTAGTAAGTTGATTTTCTAGTGAAATGAGTGGTAACCATGAAACAAGTTTCCTTTTAGTAGTTGTTGAAAATATTTCTGGAATATTCTACCAGGACGCTACCTTAGTAATTAGTGCATGATGGGAACACTTGAGTTTCTCCTGAAATCT-AGGG----AGGAGTTCTGGGGC--TTGGGGAG-----CAGAGTGAAAT----ATTCCTACCATCCATTATTTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1244242 368 + 114371477 AAGCTAATGCAAGAC----TT--AAGGAGTCCACGGGAATGAATTCTGAGTTGAAACTCATAGCTATTGCAAAT-----------------CTTGGATGTTA------------------GCAATATGTTGTCTTAAGAAAT----AGGAACATTTTATTATCTCAATACATCAATTAACCAGGAGTGCCAGAGAAAACAATATTCCTAGTAAGTTGATTTTCTAGTGAAATGAGTGGTAACCATGAAACAAGTTTCCTTTTAGTAGTTGTTGAAAATATTTCTGGAATATTCTACCAGGACGCTACCTTAGTAATTAGTGCATGATGGGAACACTTGAGTTTCTCCTGAAATCT-AGGG----AGGAGTTCTGGGGC--TTGGGGAG-----CAGAGTGAAAT----ATTCCTACCATCCATTATTTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1271338 368 + 1464242 AAGCTAATGCAAGAC----TT--AAGGAGTCCACGGGAATGAATTCTGAGTTGAAACTCAAAGCTATTGCAAAT-----------------CTTGGATGTTA------------------GCAATATGTTGTCTTAAGAAAT----AGGAACATTTTATTATCTCAATACATCAATTAACCAGGAGTGCCAAAGAAAACAATATTCCTAGTAAGTTGATTTTCTAGTGAAATGAGTGGTAACCATGAAACAAGTTTCCTTTTAGTAGTTGTTGAAAATATTTCTGGAATATTCTACCAGGGCGTTACCTTAGTAATTAGTGCATGATGGGAACACTTGAGTTTCTCCTGAAATCT-AGGG----AGGAGTTCTGGGGC--TTGGGGAG-----CAGAGTGAAAT----ATTCCTAGCATCCATTATTTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1002498 367 + 81552678 AAGCTAATGCAGGAC----GT--AAGGAGTCCACGGGAATGAATTCTGAGTTGAAACTCAAAGCTATTGCAAAT-----------------CTTGGATGTTA------------------GCAATATGTTGTCTTAAGAAAT----AGGAACATTTTGTTATCTCAGTACATCAATTAACCAGGAGTGTCAGAG-AAACAATATTCCTAGTAAGTTGATTTTCTAGTGAAATGAGTGGCAACCATGAAACAAGTTTCCTTTTAGTAGCTGTTGAAAATATTTCTGGAATATTCTACCAGGACACTGCCTTAGTAATTAGTGCATGATGGGAACACTTGAGTTTCTCCTGAAATCT-AGGG----AGGAGTTCTGGGGC--TTGGGGAG-----CAGAGTGAAAT----ATTCCTACCATCCATTATTTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1347802 372 + 108979918 AAGCTAATGCAGGAC----AT--AAGGAGTCCACGGGAATGAATTCTGAG-TGAGACTCAAAGCTCTTGCAAAT-----------------CTTGGATGTTA------------------GCAATATGTCGTCTTAAGAAAT----AGGAACCTTTTATTACCTCATTACATCAATTAACCAGGAGTGTCAGAGAAAACAGTATTCCTAGTAAGTTGATTTTCTAGTAAAATGAGTGGTAGCAATGAAACAAGTTTCCTTTTAGTAGTTGTTGAAAATATTTCTGGAATATTCTACCAGGACACTGCCTTAGTAATTAGTGCATGATGAGAACACTTGAGTTTCTCCTGAAATCTGAAGG----AGGAGTTGTGGGGC--TTGGGGAG-----CAGAGTGAAATGTTAATTCCTACCATCCATTATTTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1319981 372 - 111193037 AAGCTAATGCAGGAC----AT--AAGGAGTCCACGGGAATGAATTCTGAG-TGAGACTCAAAGCTCTTGCAAAT-----------------CTTGGATGTTA------------------GCAATATGTCGTCTTAAGAAAT----AGGAACCTTTTATTACCTCATTACATCAATTAACCAGGAGTGTCAGAGAAAACAGTATTCCTAGTAAGTTGATTTTCTAGTAAAATGAGTGGTAACAATGAAACAAGTTTCCTTTTAGTAGTTGTTGAAAATATTTCTGGAATATTCTACCAGGACACTGCCTTAGTAATTAGTGCATGATGAGAACACTTGAGTTTCTCCTGAAATCTGAAGG----AGGAGTTGTGGGGC--TTGGGGAG-----CAGAGTGAAATGTTAATTCCTACCATCCATTATTTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1348101 372 + 3644372 AAGCTAATGCAGGAC----AT--AAGGAGTCCACGGGAATGAATTCTGAG-TGAGACTCAAAGCTCTTGCAAAT-----------------CTTGGATGTTA------------------GCAATATGTCGTCTTAAGAAAT----AGGAACCTTTTATTACCTCATTACATCAATTAACCAGGAGTGTCAGAGAAAACAGTATTCCTAGTAAGTTGATTTTCTAGTAAAATGAGTGGTAACAATGAAACAAGTTTCCTTTTAGTAGTTGTTGAAAATATTTCTGGAATATTCTACCAGGACACTGCCTTAGTAATTAGTGCATGATGAGAACACTTGAGTTTCTCCTGAAATCTGAAGG----AGGAGTTGTGGGGC--TTGGGGAG-----CAGAGTGAAATGTTAATTCCTACCATCCATTATTTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1300928 372 - 10304083 AAGCTAATGCAGGAC----AT--AAGGAGTCCACGGGAATGAATTCTGAG-TGAGACTCAAAGTTCTTGCAAAT-----------------CTTGGATGTTA------------------GCAATATGTCGTCTTAAGAAAT----AGGAACCTTTTATTACCTCAATACATCAATTAACCAGGAGTGTCAGAGAAAACAGTATTCCTAGTAAGTTGATTTTCCAGTAAAATGGGTGGTAACAATGAAACAAGTTTCCTTTTAGTAGTTGTTGAAAATATTTCTGGAATATTCTGCCAGGACACTGCCTTAGTAATTAGTGCATGATGAGAACACTTGAGTTTCTCCTGAAATCTGAAGG----AGGAGTTCCGGGGC--TTGAGGAG-----CAGAGTGAAATATTAATTCCTACCATCCGTTATTTG i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 850562 372 - 2200435 AAGCTAATGCAGGAC----AT--AAGGAGTCCACGGGAATGAATTCTGAG-TGAGACTCAAAGCTCTTGCAAAT-----------------CTTGGATGTTA------------------GCAATATGTCGTCTTAAGAAAT----AGGAACCTTTTATTACCTCAATACATCAATTAACCAGGAGTGTCAGAGAAAACAGTATTCCTGGTAAGTTGATTTTCTAGTAAAATGGGTGGTAACAATGAAACAAGTTTCCTTTTAGTAGTTGTTGAAAATATTTCTGGAATATTCTGCCAGGACACTGCCTTAGTAATTAGTGCATGATGAGAACACTTGAGTTTCTCCTGAAATCTGAAGG----AGGAGTTGTGGGGC--TTGGGGAG-----CAGAGTGAAATATTAATTCCTACCATCTGTTATTTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1288799 370 - 13651311 AAGCTAATGCAGGAC----AT--AAGGAGTCCACGGGAATGAATTCTGAGTTGAGACTCAAAGCTATTGCAAAT-----------------CTTGGATGTTA------------------GCAATATGTCGTCTTAAGAAAT----AGGAACCTTTTATTACCTCAATACATCAATTAACCAGGAGTGTCAGAGAAAACAGTATTCCTAGTAAGTTGATTTTCTAGTAAAATGAGTGGTAACAATGAAACAAGTTTCCTTTTAGTA---GTTGAAAATATTTCTGGAATATTCTACGAGGACACTGCCTTAGTAATTAGTGCATGATGAGAACACTTGAGTTTCTCCTGAAATCTGAAGG----AGGAGTTCTGGGGC--TTGGGGAG-----CAGAGTGAAATATTAATTCCTACCATCCATTATTTG i colAng1.NW_012118821v1 I 367 C 0 s calJac3.chr14 1305269 356 - 108792865 AAGCTAACACAAGAC----GT--AAGGAGCGCACGGGGACC-GTTCTGAGGTGAGAC----------------T-----------------CCTGGACATCA------------------GCAATATGTCGCCTTAGGAAAC----GGGAACATTTTCTGACCTCCCTACATGAGTTACCCAGGAGTGTCAGATACAACAATATTCCTAGTAAATTGGTTTTCGAGTGACATGAGTGGTGACTGTGAAACAAGTTTCCTTTTAATAGTTGTGGGAAATATTTCTGGAATATTCTACCAGAATGCTGCCTTAGTAATGAGTGCATAATGGGAACACCTGAGCTGCTGCTTCAGTCTGAGGG----AGGAGTTCTGAGGC--TGGGAGAG-----CAGAGTGAAATGTTTATTCCTACCACCCATTATTTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1150632 368 - 7082604 AAGCTAATGCAAGAC----AT--AAAGAGTGCATGGGAACG-ATTCTGAGTTGAGACTTAAAGTTACTGC-AAT-----------------CCTGAACGTTA------------------GCA--ATGTCACCTTAAGAAAT----GGGAATCGTTTCTTACCTCACTACGTCAGTTAACCAGGAGTGTCAGATAAAACGATCTTCATAGTAAATTGATTTTTGAGTGAAATGAATGGTGACCATGAAACAAGTTTCCTTTTAATAGTTGTGGAAAATATTTCTGGAATATTCTACCAGAATGCTGCCTTAGTAATTAGTGCATAATGGGAACA-CTGAGCTCCTTCTTCAGTCCGAGGG----AGGAGTTCTGAGGT--GAGGAGAG-----CAGAGTGAAATATTTATTCCTACCATCCATTATTTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1244091 372 + 1864846 AAGCTAATGCAAGAC----GT--AAAGAGTGCATGGGAGCG-ATTCTGAGTTGAGACTCGAAGTTACTGCAAAT-----------------CCTGGACGTTA------------------GCAATATGTCGCCTTAAGAAAT----GGGAACAGTTTCTTACCTCACTACATCAGTTAACCAGGAGTGTCAGATAAAACAGTATTCCTAGTAAATTGATTTTCGAGTGAAATGAGTGGTGACCACGAAACAAGTTTCCTTTTAATAGTTGTGGAAAATATTTCTGGAATATTCTACCAGAATGCTGCCTTAGTAATTAGTGCATAATGGGAACACTTGAGCTTCTTCTTCAATCTGATGG----AGGAGTTTTGAGGC--TGGGAGAG-----CAGAGTGAAATATTTATTCCTTCCGTCCATTATCTG i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 885568 378 + 5252280 GGGTTAATACATGAC----TTGCACAGAATGCA-------GAATCCTGATTTGGGAATCAAAGCAGCTGCAAAT-----------------ACAGGGTGTGA------------------GCAATATCTTCTTTTAATAAGTAGCCAGGAGCATTTTGTTACCTTACTATATCAGCTAACTTGGAGTTTCAGAGAAAACCATATTCCTATTAGGAGAATTTTCAAGTTAAACGAGTGATGACTACAAAGCAATTTTTC-TTTAGTGTTTGTTGAAAGT-CTTCTGGATTATTCCAGCAGAGACCTGCCTTAGTAATTACTGCATGATGGACA-GCTTGAGTTCCTTCTTTGATGTGAGGGAGGCAGGGACTCTGAGGC--TCCAACAGAGCCTCAGAGGGGGACACTTATTCTCACTGTGCATTATTTG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1560748 407 + 4416731 GAATTAATGCAGGACTGAAAC--AAAGAGCCCACGGGACTAAATTCTGAGTTGACAATCAAAGCaaatttaaataatgttttaataaataatCAGGAAATTATTTAAACAAACAAATAAGGCAATAT-TTGTTTTAAGAAAT----AA----ATTTTATTACCTTACTACATCATTTAACCACAGTTTTCAGAAAAATCACTATTCTTATTAATTGAATTTTCTAGTTGAATGAGTGCTAACCATGAAATGATTTTTATTTTAATATTTATCTAGTATCTTTCTGGAATATTAAACC-GAACTCTGTTTTAGTCATCAGTGCAGAACTCAAAATCTTGAGTTTCTGTTAGATTCTGAGAG----AGGC-TTCTAAGGCGGTTGGACCA-----TGGAATGGAACATTTTTTCTTATCTTCCATTATTTG i dasNov3.JH576208 C 0 C 0 e chlSab2.chr14 1371346 251 - 107702431 I a score=10500.000000 s hg38.chr2_KI270774v1_alt 4831 1 + 223625 C s panTro5.chr2A 1283849 1 + 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1244610 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1271706 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1002865 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1348174 1 + 108979918 C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1320353 1 - 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1348473 1 + 3644372 C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1301300 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 850934 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1289169 1 - 13651311 C i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1305625 1 - 108792865 C i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1151000 1 - 7082604 C i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1244463 1 + 1864846 C i cebCap1.NW_016107827v1 C 0 C 0 s dasNov3.JH576208 1561155 1 + 4416731 C i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 885946 0 + 5252280 C e chlSab2.chr14 1371346 251 - 107702431 I a score=94094.000000 s hg38.chr2_KI270774v1_alt 4832 18 + 223625 AAAAATCACGTAGAATTg s panTro5.chr2A 1283850 18 + 111504155 AAAAATCACGTAGAATTg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1244611 18 + 114371477 AAAAATCACGTAGAATTg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1271707 18 + 1464242 AAAAATCACGTAGAATTg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1002866 18 + 81552678 AAAAATCACATAGAATTg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1348175 18 + 108979918 AAAAGTTACATAGAATTg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1320354 18 - 111193037 AAAAGTTACATAGAATTg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1348474 18 + 3644372 AAAAGTTACATAGAATTg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1301301 18 - 10304083 AAAAATTACATAGAATTG i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 850935 18 - 2200435 AAAAATTACATAGAATTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1289170 18 - 13651311 AAAAATTACATAGAATTg i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1561156 18 + 4416731 AAAAGTTAGATAGAATTA i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1151001 0 - 7082604 C e cebCap1.NW_016107827v1 1244464 0 + 1864846 C e otoGar3.GL873658 885946 0 + 5252280 C e calJac3.chr14 1305626 0 - 108792865 C e chlSab2.chr14 1371346 251 - 107702431 I a score=293383.000000 s hg38.chr2_KI270774v1_alt 4850 60 + 223625 gccgggcatggtggctcatgcctgtaatctcagcactttgggaggctgaggcgggtgaat s panTro5.chr2A 1283868 60 + 111504155 gccgggcatggtggctcatgcctgtaatctcagcactttgggaggctgaggcgggtgaat i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1244629 60 + 114371477 gccgggcatggtggctcatgcctgtaatctcagcactttgggaggctgaggcgggtgaat i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1271725 60 + 1464242 gccgggcatggtggctcatgcctgtaatctcagcactttgggaggctgaggcgggtgaat i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1002884 60 + 81552678 gccgggcatggtggctcatgcctgtaatcccagcactttgggaggccgaggcagatgaat i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1348193 60 + 108979918 gccgggcatggtggctcacgcctgtaatctcagcactttgggaggccgaggcaggtgaat i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1320372 60 - 111193037 gccgggcatggtggctcacgcctgtaatctcagcactttgggaggccgaggcaggtgaat i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1348492 60 + 3644372 gccgggcatggtggctcacgcctgtaatctcagcactttgggaggccgaggcaggtgaat i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1301319 60 - 10304083 Tccgggcatggtggctcacgcctgtaatctcagctctttgggaggccgaggcaagtgaat i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 850953 60 - 2200435 Tccgggcacggtggctcacgcctgtaatctcagctctttgggaggccgaggcaggtgaat i manLeu1.NW_012103754v1 C 0 I 1605 s colAng1.NW_012118821v1 1289188 60 - 13651311 gccaggcatggtggctcatgcctgtaatctcagcactttgggaggccgaggcaggtgaat i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1151001 0 - 7082604 C e cebCap1.NW_016107827v1 1244464 0 + 1864846 C e otoGar3.GL873658 885946 0 + 5252280 C e dasNov3.JH576208 1561174 0 + 4416731 C e calJac3.chr14 1305626 0 - 108792865 C e chlSab2.chr14 1371346 251 - 107702431 I a score=755394.000000 s hg38.chr2_KI270774v1_alt 4910 221 + 223625 catgaggtcatgagatcgagaccatcctggctgacacagtgaaacc--atctttactaaaaatac-aaaaaattagccgggcctggttgcgggcacctgtagtcccagctactcaggaggctgaggcaggagaatggtgtgaacccgggaggcagagcttacagtgagccgagatcatcgcgccactgtactccagcctgagtgacagagcgagact-ccttctc s panTro5.chr2A 1283928 221 + 111504155 catgaggtcatgagatcgagaccatcctggctgacacagtgaaacc--atctttactaaaaatac-aaaaaattagccgggcctggttgcgggcacctgtagtcccagctattcaggaggctgaggcaggagaatggtgtgaacccgggaggcagagcttacagtgagccgagatcattgcgccgctgtactccagcctgagtgacagagcgagact-ccatctc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1244689 221 + 114371477 catgaggtcatgagatcgagaccatcctggctgacacagtgaaacc--atctttactaaaaatac-aaaaaattagccgggcctggttgcgggcacctgtagtcccagctactcaggaggctgaggcaggagaatggtgtgaacccgggaggcagagcttacagtgagccgagatcattgcgccgctgtactccagcctgagtgacagagcgagact-ccatctc i panPan2.chr2A C 0 M 1423 s gorGor5.CYUI01015607v1 1271785 221 + 1464242 catgaggtcatgagatcgagaccatcctggctatcacgatgaaacc--atctttactaaaaatac-aaaaaattagccgggcatggttgcgggcacctgtagtcccagctactcaggaggctgaggcaggagaatggtgtgaacccgggaggcagagcttgcagtgagccgagatcatcgcgccactgtactccagcctgagcgacagagcgagact-ccatctc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1002944 222 + 81552678 catgaggtcaggagatcaagaccatcctggctaacacagtgaaacc--gtctctactaaaaatac-aaaaaattagccgggtgtggtagtgggcacctgtggtcccagctactcaggaggctgaggcaggagaatggtgtgaacctgggaggcggagcttgcagtgagccgagatcattgcgccactgcactccagcctgggcaacagagcaagactcccatttc i nomLeu3.chr19 C 0 I 8 s rheMac8.chr13 1348253 215 + 108979918 cacgaggtcagg------agaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaaattagccaggcatggtgatggacacccgtagtcccagctactcgggaggctgaggcaggagaatggtgtgaacccaggaggcggagcttgcagtgagccgagatca---caccactgcactccagcctgggtgacagaatgaggct-ccatctc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1320432 215 - 111193037 cacgaggtcagg------agaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaaattagccaggcgtggtgatggacacccgtagtcccagctactcgggaggctgaggcaggagaatggtgtgaacccaggaggcggagcttgcagtgagccgagatca---caccactgcactccagcctgggtgacagaatgaggct-ccatctc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1348552 215 + 3644372 cacgaggtcagg------agaccatcctggctaatacggtgaaaccccgtctctactaaaaatacaaaaaaattagccaggtgtggtgatggacacccgtagtcccagctactcgggaggctgaggcaggagaatggtgtgaacccaggaggcggagcttgcagtgagccgagatca---caccactgcactccagcctgggtgacagaatgaggct-ccatctc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1301379 214 - 10304083 cacgaggtcagg------agaccatcctggctaacacagtgaaaccctgtctctactaaaaatac-aaaaaattagctggacgtggtggcagacacccatagtcccagctacttgggagactgaggcaggagaatggtgtaaacccgggaggcggagcttgcagtgagccgagatca---cgccactgcactccagcctgggcgacagagcgagact-ctgtctc i cerAty1.NW_012000820v1 C 0 C 0 s colAng1.NW_012118821v1 1289248 214 - 13651311 cacgaggtcagg------agaccatcctgcctaacacggtgaaaccctgtctctactaaaaatac-aaaaaattagccaggcgtggtggcggacacccgtagtcccagctgcttgggaagctgaggcaggagagtggtgtgaacccgggaggtggaggttgcagtgagccgagatca---cgccactgcaccccagcctgggcaacagagcgagact-ctatctc i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1151001 0 - 7082604 C e cebCap1.NW_016107827v1 1244464 0 + 1864846 C e otoGar3.GL873658 885946 0 + 5252280 C e dasNov3.JH576208 1561174 0 + 4416731 C e calJac3.chr14 1305626 0 - 108792865 C e manLeu1.NW_012103754v1 851013 1605 - 2200435 I e chlSab2.chr14 1371346 251 - 107702431 I a score=11011.000000 s hg38.chr2_KI270774v1_alt 5131 9 + 223625 aaaaaaaaa-- s panTro5.chr2A 1284149 9 + 111504155 aaaaaaaaa-- i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1272006 8 + 1464242 -aaaaaaaa-- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1003174 9 + 81552678 aaaaaaaaa-- i nomLeu3.chr19 I 8 C 0 s rheMac8.chr13 1348468 7 + 108979918 --aaaaaaa-- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1320647 7 - 111193037 --aaaaaaa-- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1348767 7 + 3644372 --aaaaaaa-- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1301593 6 - 10304083 ---aaaaat-- i cerAty1.NW_012000820v1 C 0 C 0 s colAng1.NW_012118821v1 1289462 9 - 13651311 --aacaaaaaa i colAng1.NW_012118821v1 C 0 I 16 e saiBol1.JH378218 1151001 0 - 7082604 C e cebCap1.NW_016107827v1 1244464 0 + 1864846 C e otoGar3.GL873658 885946 0 + 5252280 C e dasNov3.JH576208 1561174 0 + 4416731 C e calJac3.chr14 1305626 0 - 108792865 C e manLeu1.NW_012103754v1 851013 1605 - 2200435 I e chlSab2.chr14 1371346 251 - 107702431 I e panPan2.chr2A 1244910 1423 + 114371477 M a score=24572.000000 s hg38.chr2_KI270774v1_alt 5140 31 + 223625 aaaaaaaagaaagaaaaaaaGAAAAGAAAGA s panTro5.chr2A 1284158 26 + 111504155 aaaaaaaa-----aagaaaagaaaaGAAAGA i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1272014 29 + 1464242 aaaaaaaagaa--aagaaaagaaaAGAAAGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1003183 31 + 81552678 aaaaaaaaaaaaaaaGGAAAGAAAAGAAAGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1348475 18 + 108979918 -------------aaagtaatagaagaaaTT i rheMac8.chr13 C 0 I 1 s macFas5.chr13 1320654 18 - 111193037 -------------aaagtaatagaagaaaTT i macFas5.chr13 C 0 I 1 s macNem1.NW_012011978v1 1348774 18 + 3644372 -------------aaagtaatagaagaaaTT i macNem1.NW_012011978v1 C 0 I 1 s cerAty1.NW_012000820v1 1301599 18 - 10304083 -------------aaagtaataaaagaaaTT i cerAty1.NW_012000820v1 C 0 I 1 e saiBol1.JH378218 1151001 0 - 7082604 C e cebCap1.NW_016107827v1 1244464 0 + 1864846 C e otoGar3.GL873658 885946 0 + 5252280 C e dasNov3.JH576208 1561174 0 + 4416731 C e calJac3.chr14 1305626 0 - 108792865 C e colAng1.NW_012118821v1 1289471 16 - 13651311 I e manLeu1.NW_012103754v1 851013 1605 - 2200435 I e chlSab2.chr14 1371346 251 - 107702431 I e panPan2.chr2A 1244910 1423 + 114371477 M a score=1365.000000 s hg38.chr2_KI270774v1_alt 5171 1 + 223625 A s panTro5.chr2A 1284184 1 + 111504155 A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1246333 1 + 114371477 A i panPan2.chr2A M 1423 C 0 s gorGor5.CYUI01015607v1 1272043 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1003214 1 + 81552678 A i nomLeu3.chr19 C 0 C 0 s otoGar3.GL873658 885946 1 + 5252280 A i otoGar3.GL873658 C 0 C 0 e saiBol1.JH378218 1151001 0 - 7082604 C e cebCap1.NW_016107827v1 1244464 0 + 1864846 C e dasNov3.JH576208 1561174 0 + 4416731 C e calJac3.chr14 1305626 0 - 108792865 C e colAng1.NW_012118821v1 1289471 16 - 13651311 I e manLeu1.NW_012103754v1 851013 1605 - 2200435 I e chlSab2.chr14 1371346 251 - 107702431 I e cerAty1.NW_012000820v1 1301617 1 - 10304083 I e macNem1.NW_012011978v1 1348792 1 + 3644372 I e macFas5.chr13 1320672 1 - 111193037 I e rheMac8.chr13 1348493 1 + 108979918 I a score=4044.000000 s hg38.chr2_KI270774v1_alt 5172 1 + 223625 A s panTro5.chr2A 1284185 1 + 111504155 A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1246334 1 + 114371477 A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1272044 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1003215 1 + 81552678 A i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1348494 1 + 108979918 A i rheMac8.chr13 I 1 C 0 s macFas5.chr13 1320673 1 - 111193037 A i macFas5.chr13 I 1 C 0 s macNem1.NW_012011978v1 1348793 1 + 3644372 A i macNem1.NW_012011978v1 I 1 C 0 s cerAty1.NW_012000820v1 1301618 1 - 10304083 T i cerAty1.NW_012000820v1 I 1 C 0 s chlSab2.chr14 1371597 1 - 107702431 a i chlSab2.chr14 I 251 C 0 s calJac3.chr14 1305626 1 - 108792865 A i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1151001 1 - 7082604 A i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1244464 1 + 1864846 A i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 885947 1 + 5252280 G i otoGar3.GL873658 C 0 C 0 e dasNov3.JH576208 1561174 0 + 4416731 C e colAng1.NW_012118821v1 1289471 16 - 13651311 I e manLeu1.NW_012103754v1 851013 1605 - 2200435 I a score=137949.000000 s hg38.chr2_KI270774v1_alt 5173 17 + 223625 AAAATCACGTAGAATTC s panTro5.chr2A 1284186 17 + 111504155 AAAATCACGTAGAATTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1246335 17 + 114371477 AAAATCACGTAGAATTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1272045 17 + 1464242 AAAATCACGTAGAATTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1003216 17 + 81552678 AAAATCATGTAGAATTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1348495 17 + 108979918 AAAATCACATAGAATTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1320674 17 - 111193037 AAAATCACATAGAATTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1348794 17 + 3644372 AAAATCACATAGAATTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1301619 17 - 10304083 AAAATCACATAGAATTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1371598 17 - 107702431 aaaaTCACGTAGAATTC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1289487 17 - 13651311 AAAATCACATAGAATTC i colAng1.NW_012118821v1 I 16 C 0 s calJac3.chr14 1305627 17 - 108792865 AAAATTACATGGAATTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1151002 17 - 7082604 AAAATTACATGGAATTC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1244465 17 + 1864846 AAAATTACATGGAATTC i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 885948 17 + 5252280 GAAATGATACACAATTC i otoGar3.GL873658 C 0 C 0 e dasNov3.JH576208 1561174 0 + 4416731 C e manLeu1.NW_012103754v1 851013 1605 - 2200435 I a score=1315573.000000 s hg38.chr2_KI270774v1_alt 5190 168 + 223625 AAGACTGTAGGATGATTTCACACAGATTCCAATGGCTGGAAATTTTAGGTTGCAGTAGTTTTT--AAATAAAATATTTTTCTTCCTCTTTGACTGTTTTTTCCTTT----AAAAAAAA---A---GAGTGGAGAGGAAGCAAATGTTATTGAATGAAGAATTTACTTCCATCCTGTGCTG s panTro5.chr2A 1284203 170 + 111504155 AAGACTGTAGGATGATTTCACACAGATTCCAATGGCTGGAAATTTTAGGTTGCAGTAGTTTTT--AAATAAAATATTTTTCTTCCTCTTTGACTGTTTTTTCCTTT----AAAAAAAA---A-AAGAGTGGAGAGGAAGCAAATGTTATTGAATGAAGAATTTACTTCCATCCTGTGCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1246352 168 + 114371477 AAGACTGTAGGATGATTTCACACAGATTCCAATGGCTGGAAATTTTAGGTTGCAGTAGTTTTT--AAATAAAATATTTTTCTTCCTCTTTGACTGTTTTTTCCTTT----AAAAAAAA---A---GAGTGGAGAGGAAGCAAATGTTATTGAATGAAGAATTTACTTCCATCCTGTGCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1272062 171 + 1464242 AAGACTGTAGGATGATTTCACACGGATTCCAATGGCTGGAAATTTTAGGTTGCAGTAGTTTTT--AAATAAAATATTTTTCTTCCTCTTTGACTGTTTTTTCCTTT----AAAAAAAA---AAAAGAGTGGAGAGGAAGCAAATGTTATTGAATGAAGAATTTACTTCCATCCTGTGCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1003233 168 + 81552678 AAGACTGTAGGATGATTTCACAAGGATTCCAATGGCTGGAAATTTGAGGTTGCAGTAGTTTTT--AAATAAAATATTTTTCTTCCTCTTTGACTGTTTTTTCCCTT----AAAAAAAA---A---GAGTGGAGAGGAAGCAAATGTTACTGAATGAAGAATTTACTTCCATCCTGTGCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1348512 167 + 108979918 AAGACTGTGGGATGATTTCACAAGGATTCCAATGGCTGGAAATTTGAGGTTGCAGTAGTTTTT--AAATAAAATATTTTTCTTCCTCTTTGACTGTTTTTTCCTTT-AAAAAAAAAAA---A---GAGTGGAGAGGAAGCAAATGTTATTGAATGAAGAAT----TTCCATCTTGTGCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1320691 167 - 111193037 AAGACTGTGGGATGATTTCACAAGGATTCCAATGGCTGGAAATTTGAGGTTGCAGTAGTTTTT--AAATAAAATATTTTTCTTCCTCTTTGACTGTTTTTTCCTTT-AAAAAAAAAAA---A---GAGTGGAGAGGAAGCAAATGTTATTGAATGAAGAAT----TTCCATCTTGTGCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1348811 167 + 3644372 AAGACTGTGGGATGATTTCACAAGGATTCCAATGGCTGGAAATTTGAGGTTGCAGTAGTTTTT--AAATAAAATATTTTTCTTCCTCTTTGACTGTTTTTTCCTTT-AAAAAAAAAAA---A---GAGTGGAGAGGAAGCATATGTTATTGAATGAAGAAT----TTCCATCTTGTGCTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1301636 167 - 10304083 AAGACTGTGGGATGATTTCACAA-GATTCCAATGGCTGGAAATTTGAGGTTGCAGTAGTTTTT--AAATAAAATATTTTTCTTCCTCTTTGACTGTTTTTTCCTTTAAAAAAAAAAAA---A---GAGTGGAGAGAAAGCAAATGTTATTGAATGAAGAAT----TTCCATCTTGTGCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1371615 165 - 107702431 AAGACTGTGGGATGATTTCACAAGGATTCCAATGGCTGGAAATTTGAGATTGCAGTAGTTTTT--AAATAAAATATTTTTCTTCCTCTTTAACTGTTTTTTCCTTT---AAAAAAAAA---A---GAGTGGAGAGGAAGCAAATGTTATTGAATGAAGAAT----TTCCATCTTGTGCTG i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1289504 164 - 13651311 AAGACTGTGGGATGATTTCACAAGGATTCCAATGGCTGGAAATTTGAGATTGCAGTAGTTTTT--AAATAAAATATTTTTCTTCCTCTTTGACTGTTTTTGCCTTT----AAAAAAAA---A---GAGTGGAGAGGAAGCAAATGTTATTGAATGAAGAAT----TTCCATCTTGTGCTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1305644 167 - 108792865 AAGACAGCCGGATGATTTCACAAGGGTTCCAATGGCGGTAAATTTGAGATTGCAGTAGTTTTT--AAATAAAATATTGTTCTTCCTCTTTGACTGTTTTTCCCCTT----TAAAAAAA---A---GAGTGAAGAGGAAGCAAATGCTACTAAATGGAGAATTTCCTTCCTTCCT-TGCTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1151019 170 - 7082604 AAAACAGTGGGATGATTTCACAAGGATTCCAATGGCTAGAAATTTGAGATCACAGTAGTTTTT--AAATAAAATATTTTTCTTCCTCTTTGACTGTTTTTTCCCTT----TAAAAAAAAATA---GAGTGAAGAGGAAGCAAATGTTACTAAATGGAGAATTGGCTTCCTTCCT-TGCTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1244482 168 + 1864846 AAGACAGTGGGATGATTTCACAAGGATTCCAATGGCTGGAAATTTGAGATTGCAGTAGTTTTT--AAATAAAATATTTTTCTTCCTCTTTGACTGTTTGTTCCTTT----AAAAAAAAA--A---GAGTGAAGAGGAAGCAAATGTTACTTAATGGAGAATTTACCTCCTTCCT-TGCCG i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 885965 153 + 5252280 AAGAACTTGGGCTGACTC--TAATGATTCTGACAGCTGGAAATTTGAAATGGTAGTATTTTTTTCAAATAAAGCATTCATTTTTCT-------TCACTTTCCCATT----AAAAAAAT---A---GAGT--------AACAAACTGTGTTAAATGAGCGACTGGTCACTGTCCTGCTCTG i otoGar3.GL873658 C 0 I 107 s dasNov3.JH576208 1561174 168 + 4416731 AGGAATTTGGGCTAATTCTGTAGTGATTCCAGTTGCTGGACATTTGAGACAGTAGCACTTTTTTAAAGTGAATGGTTTATTTCCCTTCTTTTATGTCTCTTTCTCC------TAAAAA---A---GAATGCCAAGAAAATGAATTTTACTATATGAAGGATTTACTTTTATCCTGTTCTG i dasNov3.JH576208 C 0 C 0 e manLeu1.NW_012103754v1 851013 1605 - 2200435 I a score=826713.000000 s hg38.chr2_KI270774v1_alt 5358 113 + 223625 TT--------------TGTTATTCATGCAAATTAT-GTCAGATT----ATAGAGACATAGCTTGGCGCTCACTGCACA-GGGGAAGCTGCCCTTCCCCAATTCCCACGAAAGATACCCAGGGAGGCCCCCCCA s panTro5.chr2A 1284373 113 + 111504155 TT--------------TGTTATTCATGCAAATTAT-GTCAGATT----ATAGAGACATAGCTTGGCGCTCACTGCACA-GGGGAAGCTGCCCTTCCCCAATTCCCACGAAAGATACCCAGTGAGGCCCCGCCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1246520 113 + 114371477 TT--------------TGTTATTCATGCAAATTAT-GTCAGATT----ATAGAGACATAGCTTGGCGCTCACTGCACA-GGGGAAGCTGCCCTTCCCCAATTCCCACGAAAGATACCCAGTGAGGCCCCGCCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1272233 113 + 1464242 TT--------------TGTTATTCATGCAAATTAT-GTCAGATT----ATAGAGACATAGCTTGGCGCTCACTGCACA-GGGGAAGCTGCCCTTCCCCAATTCCCACGAAAGATACCCAATGAGGCCCTGCTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1003401 119 + 81552678 TTTGATTA--------TGTTCTTCATGCGAATTAT-GTCAGATT----ATACAGACATAGCTTGGCGTGCACTGCACA-GGGGAAGCTGCCCTTCCCCAATTCCCACGAAAGATACCCAGTGAGGCCCCGCCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1348679 119 + 108979918 TTTAATTG--------TGTTATTCATGCAAATTAT-GTCAGATT----ATTCAGACATAGCTTGACACGCACTGCACA-GGGGAAGCTGCCCTTTCCTAATTCCCACAAAAGAGACCCAGTGAGACCCTGCCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1320858 119 - 111193037 TTTAATTG--------TGTTATTCATGCAAATTAT-GTCAGATT----ATTCAGACATAGCTTGACACGCACTGCACA-GGGGAAGCTGCCCTTTCCTAATTCCCACAAAAGAGACCCAGTGAGACCCTGCCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1348978 119 + 3644372 TTTAATTG--------TGTTATTCATGCAAATTAT-GTCAGATT----ATTCAGACATAGCTTGACACGCACTGCACA-GGGGAAGCTGCCCTTTCCTAATTCCCACAAAAGAGACCCAGTGAGACCCTGCCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1301803 119 - 10304083 TTTAATTG--------TGTTATTCATGCAAATTAT-GTCAGATT----ATTCAGACATAGCTTGACACGCACTGCACA-GGGGAAGCTGCCCTTTCCCAATTCCCACAAAAGATACCCAGTGAGACCCTGCCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1371780 119 - 107702431 TTTAATTG--------TGTTATTCATGCAAATTAT-GTCAGATT----ATTCAGACATAGCTTGATGTGCACTGCACA-GGGGAAGCTGCCCTTTCCCAATTCCCACAAAAGATACCCAGTGAGACCCTGCCA i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1289668 119 - 13651311 TTTAATTG--------TGTTATTCATGCAAATTAT-GTCAGATT----ATTCAGACATAGCTTGACGCGCACTGCACA-GGGGAAGCTGCCCTTTCCCAATTCCCACAAAAGATACCCAGTGAAACTCTGCCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1305811 123 - 108792865 TTTAATTC--------TGTTATTCATGTGAATTAT-GGCAGATTATACATACAGACATTGCTTTGAGTGCACAGCACG-GGGGAAGCTGCCCTTCCCCAATTCCCGCAAAAGATCCCCGGTGAGGCCCCTCCG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1151189 119 - 7082604 TTTAATTG--------TGTTATTCATGGGAATTAT-GTCAGATT----ATACAGACATAGCTTTGAGTGCACAGCATG-AGGGACGCTGCCCTTTCCCAATCCCCACAAAAGATACCCAGTGAGGCCCCACTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1244650 119 + 1864846 TTTAATTG--------TGTTATTCATGCGAATTAT-GTCAGATT----ATACAGACATAGCTTTGAGTGTACAGCATG-GGGGAAGCTGCCCTTCCCCAATTCCCACAAAAGATACCCAGTGAGGCCCCACTG i cebCap1.NW_016107827v1 C 0 C 0 s dasNov3.JH576208 1561342 129 + 4416731 CTTAATTGAAAGTGCATGCTATTTATATAAATCATAGTTAGATT----ATAAGGACTAAATTTGGAGTGCATCAAAAGTGGAGATGTTATCTTTTCTTAATCTCCCAGCTAGTTTCCTACTTCTCTCCCCTCA i dasNov3.JH576208 C 0 I 1 e otoGar3.GL873658 886118 107 + 5252280 I e manLeu1.NW_012103754v1 851013 1605 - 2200435 I a score=1328253.000000 s hg38.chr2_KI270774v1_alt 5471 167 + 223625 TGTTTCT------GTGTATATTGC----TTATATTTTGCATATTTCTTTATA---ATTCCATTTTTGCCTCTAGGCTGAGCCTCCAAAGGGAAACTTTAGTTTAGCTTTTTTATATTCAGCATGAGGGTCAGCAC-ATATGTACACT---TAAATG--TTTTAAATGAATAAATTAATGAAGAAGG--- s panTro5.chr2A 1284486 167 + 111504155 TGTTTCT------GTGTATATTGC----TTATATTTTGCATATTTCTTTATA---ATTCCATTTTTGCCTCTAGGCTGAGCCTCCAAAGGGCAACTTTAGTTTAGCTTTTTTATATTCAGCATGAGGGTCAGCAC-ATATGTACACT---TAAATG--TTTTAAATGAATAAATTAATGAAGAAGG--- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1246633 167 + 114371477 TGTTTCT------GTGTATATTGC----TTATATTTTGCATATTTCTTTGTA---ATTCCATTTTTGCCTCTAGGCTGAGCCTCCAAAGGGCAACTTTAGTTTAGCTTTTTTATATTCAGCATGAGGGTCAGCAC-ATATGTACACT---TAAATG--TTTTAAATGAATAAATTAATGAAGAAGG--- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1272346 166 + 1464242 TGTTTCT------GTGTATATTGC----TTATATTTTGCATATTTCTTTATA---ATTCCATTTTTGCCTCTAGGCTGAGCCTCCAAAGGGCAACTTTAGTTTAGC-TTTTTATATTCAGCATGAGGTTCAGCAC-ATATGTACACT---TAAATG--TTTTAAATGAATAAATTAATGAAGAAGG--- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1003520 170 + 81552678 TGTTTCT------GTGTATATTGc----ttatattttgcatatttctttata---attccatttttgcctctaggctgagcctccaaagggcaacttttgtttagcttttttatattcagcatgaggttcagcac-atatgtacacttaataaatg--ttttaaatgaataaatTAATGAAGAAGG--- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1348798 170 + 108979918 TGTTTCT------GTGCATATTGc----ttgtattttgcatatttctttata---agtccatttctgcctctaggctgagcctccaaagggcaactttagtttagcttttttatattcatcatgaggttcagcac-atatgtacacttgataaatg--ttttaaatgaataaatTAACGAAGAAGG--- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1320977 170 - 111193037 TGTTTCT------GTGCATATTGc----ttgtattttgcatatttctttata---agtccatttctgcctctaggctgagcctccaaagggcaactttagtttagcttttttatattcatcatgaggttcagcac-atatgtacacttgataaatg--ttttaaatgaataaatTAACGAAGAAGG--- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1349097 170 + 3644372 TGTTTCT------GTGCATATTGc----ttgtattttgcatatttctttata---agtccatttctgcctctaggctgagcctccaaagggcaactttagtttagcttttttatattcagcatgaggttcagcac-atatgtacacttgataaatg--ttttaaatgaataaatTAACGAAGAAGG--- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1301922 170 - 10304083 TGTTTCT------GTGCATATTGc----ttgtattttgcatatttctttata---agtctatttctgcctctaggctgagcctccaaagggcaactttagtttagcttttttatattcagcatgaggttcagcac-atatgtacacttgataaatg--ttttaaatgaataaatTAACGAAGAAGG--- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1371899 170 - 107702431 TGTTTCT------GTGCATATTGC----TTGTATTTTGCATATTTCTTTATA---ATTTCATTTCTGCCTCTAGGCTGAGCCTCCAAAGGGCAACTTTAGTTTAGCTTTTTTATATTCAGCATGAAGTTCAGCAC-ATATGTACACTTGATAAATG--TTTTAAATGAATAAATTAATGAAGAAGG--- i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1289787 170 - 13651311 TGTTTCT------GTGCATATTGc----ttgtattttgcatatttctttata---attccatttctgcctctaggctgagcctccaaagggcaactttagtttaacttttttatattcagcatgaggttcagcac-atatgtacacttgataaatg--ttttaaatgaataaatTAACGAAGAAGG--- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1305934 162 - 108792865 TGGTTCT------GTGTAGATTGc----ttatattttgaatatttctctata---attcca-ttctgcctctaggctgagcctccaaagggcaactgtag-------attttgtatttagcttgaggttcagcac-atatgcacacttaatgactg--ttttaaatgaatgaatTAAGGAAGAAAC--- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1151308 165 - 7082604 TGGTTCT------GTGTAGATTGc----ttagattttgaatatttctttata---attccatttctgcctctaggctgagcctccaaagggcaactttagtt-----tttttgtattcagcttgaggttcagcac-atatgcacacttaatgaatg--ttttaaatgaatgaatTAATGAAGAAAG--- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1244769 165 + 1864846 TGGTTCT------GTGTAGATTGc----ttatattttgaatatttctttata---atttcatttctgcctctaggctgagcctccaaagggcaacttaagtt-----tttttgtattcagcttgaggttcagcac-atatgcacacttaatgaatg--ttttaaatgaatgaatTAATGAAGAAAG--- i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 886225 154 + 5252280 TGCTTCT------GTGGGGACCAC----TCACTTTT---ATGTTTCATTATG---GTTTCTTTTCTGCCCCTGAACTGAGCCCTTTAGGGGCATCTGTGTTTTAGC-TTCTTATCTTCAGCACAATGTG---------------ACTTAATAAATGCATTGTAAATGAAAAAATTAATGAAGAGgg--- i otoGar3.GL873658 I 107 I 326 s dasNov3.JH576208 1561472 177 + 4416731 TGTTCATATATAAGTGTAAAATACAAAGCTATATTGTAAA-ATAACAGAGTAAATATTCCATTTCTGCTTCTTGACC---------AGAGACAACTTTATTTTAGA-TTTTTAGCTTCAGCACT-GGCTAAGCTTAATATAAGTACTTGATCAATGTGTTTAAAATGAATAAGCTAATGAAGGAAAAAG i dasNov3.JH576208 I 1 C 0 e manLeu1.NW_012103754v1 851013 1605 - 2200435 I a score=46817.000000 s hg38.chr2_KI270774v1_alt 5638 6 + 223625 AGCAAA s panTro5.chr2A 1284653 6 + 111504155 AGCAAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1246800 6 + 114371477 AGCAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1272512 6 + 1464242 AGCAAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1003690 6 + 81552678 AGCAAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1348968 6 + 108979918 AGCAAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1321147 6 - 111193037 AGCAAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1349267 6 + 3644372 AGCAAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1302092 6 - 10304083 AGCAAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1372069 6 - 107702431 AGTAAA i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1289957 6 - 13651311 AGTAAA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1306096 6 - 108792865 AGCAAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1151473 6 - 7082604 AGCAAA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1244934 6 + 1864846 AGCAAA i cebCap1.NW_016107827v1 C 0 I 3 s dasNov3.JH576208 1561649 4 + 4416731 AGCA-- i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 886379 326 + 5252280 I e manLeu1.NW_012103754v1 851013 1605 - 2200435 I a score=155777.000000 s hg38.chr2_KI270774v1_alt 5644 38 + 223625 TTATTGTTAAAGAAACTGCCAAATATACTCACAGGAGT s panTro5.chr2A 1284659 38 + 111504155 TTATTGTTAAAGAAACTGCCAAATATACTCACAGGAGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1246806 38 + 114371477 TTATTGTTAAAGAAACTGCCAAATATACTCACAGGAGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1272518 38 + 1464242 TTATTGTTAAAGAAACAGCCAAATATACTCACAGGAGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1003696 38 + 81552678 TTAGTGTTAAAGAAACTGCCGAATATACTCACTGGAGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1348974 38 + 108979918 TTAGTATTAAAGAAACTGCCAAATGTACTCACAGGAGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1321153 38 - 111193037 TTAGTATTAAAGAAACTGCCAAATGTACTCACAGGAGT i macFas5.chr13 C 0 I 3 s macNem1.NW_012011978v1 1349273 38 + 3644372 TTAGTATTAAAGAAACTGCCAAATGTACTCACAGGAGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1302098 38 - 10304083 TTAGTATTAAAGAAACTGCCAAATGTACTCACAGGAGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1372075 38 - 107702431 TTAGTATTAAAGAAACTGCCAAATGTACTCACAGGAGT i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1289963 38 - 13651311 TTAGTATTAAAGAAACTGCCAAATGTACTCACGGGCGT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1306102 3 - 108792865 ---------------CCG-------------------- i calJac3.chr14 C 0 I 27 s saiBol1.JH378218 1151479 3 - 7082604 ---------------TTG-------------------- i saiBol1.JH378218 C 0 I 27 s dasNov3.JH576208 1561653 35 + 4416731 --ATTATTGAAAGAACTGCC-AATATACTCAAAGTTTT i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1244940 3 + 1864846 I e otoGar3.GL873658 886379 326 + 5252280 I e manLeu1.NW_012103754v1 851013 1605 - 2200435 I a score=15510.000000 s hg38.chr2_KI270774v1_alt 5682 3 + 223625 TTC s panTro5.chr2A 1284697 3 + 111504155 TTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1246844 3 + 114371477 TTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1272556 3 + 1464242 TTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1003734 3 + 81552678 TTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1349012 3 + 108979918 TTC i rheMac8.chr13 C 0 C 0 s macNem1.NW_012011978v1 1349311 3 + 3644372 TTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1302136 3 - 10304083 TTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1372113 3 - 107702431 TTC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1290001 3 - 13651311 TTC i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1561688 3 + 4416731 TTC i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1151482 27 - 7082604 I e cebCap1.NW_016107827v1 1244940 3 + 1864846 I e otoGar3.GL873658 886379 326 + 5252280 I e calJac3.chr14 1306105 27 - 108792865 I e manLeu1.NW_012103754v1 851013 1605 - 2200435 I e macFas5.chr13 1321191 3 - 111193037 I a score=114372.000000 s hg38.chr2_KI270774v1_alt 5685 22 + 223625 ATCAG-TTCTAAGGAGAAAATTG s panTro5.chr2A 1284700 22 + 111504155 ATCAG-TTCTAAGGAGAAAATTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1246847 22 + 114371477 ATCAG-TTCTAAGGAGAAAATTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1272559 22 + 1464242 ATCAG-TTCTAAGGAGAAAACTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1003737 22 + 81552678 ATCAG-TTCTAAGGAGAAAATTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1349015 22 + 108979918 ATCAG-TTCTAAGGAGAAAACTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1321194 22 - 111193037 ATCAG-TTCTAAGGAGAAAACTG i macFas5.chr13 I 3 C 0 s macNem1.NW_012011978v1 1349314 22 + 3644372 ATCAG-TTCTAAGGAGAAAACTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1302139 22 - 10304083 ATCAG-TTCTAAGGAGAAAACTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1372116 22 - 107702431 ATCAG-TTCTAAGGAGAAAATTG i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1290004 22 - 13651311 ATCAG-TTTTAAGGAGAAAATTG i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1561691 19 + 4416731 -TCAGTTTCTAATGAGAAAA--- i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1151482 27 - 7082604 I e cebCap1.NW_016107827v1 1244940 3 + 1864846 I e otoGar3.GL873658 886379 326 + 5252280 I e calJac3.chr14 1306105 27 - 108792865 I e manLeu1.NW_012103754v1 851013 1605 - 2200435 I a score=26830.000000 s hg38.chr2_KI270774v1_alt 5707 24 + 223625 TTCCTATTGTCAGGAAAATGGGAT s panTro5.chr2A 1284722 24 + 111504155 TTCCTATTGTCAGGAAAATGGGAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1246869 24 + 114371477 TTCCTATTGTCAGGAAAATGGGAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1272581 24 + 1464242 TTCCTATTGTCAGTAAAATGGGAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1003759 24 + 81552678 TTCCTACTATCATTAAAATGAGGT i nomLeu3.chr19 C 0 T 63 s rheMac8.chr13 1349037 6 + 108979918 TTCCTA------------------ i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1321216 24 - 111193037 TTCCTACTATCATTAAAATGAGAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1349336 6 + 3644372 TTCCTA------------------ i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1302161 6 - 10304083 TTCCTA------------------ i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1372138 6 - 107702431 TTCCTA------------------ i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1290026 6 - 13651311 TTCCTA------------------ i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1306132 24 - 108792865 TTCCTGTTCCCATGAAAATGAGGT i calJac3.chr14 I 27 C 0 s saiBol1.JH378218 1151509 24 - 7082604 TTCCTATTACCATTAAAATGAGAT i saiBol1.JH378218 I 27 C 0 s dasNov3.JH576208 1561710 5 + 4416731 -------------AAAAA------ i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1244940 3 + 1864846 I e otoGar3.GL873658 886379 326 + 5252280 I e manLeu1.NW_012103754v1 851013 1605 - 2200435 I a score=8234.000000 s hg38.chr2_KI270774v1_alt 5731 6 + 223625 ACCTTA s panTro5.chr2A 1284746 6 + 111504155 ACCTTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1246893 6 + 114371477 ACCTTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1272605 6 + 1464242 ACCTTA i gorGor5.CYUI01015607v1 C 0 C 0 s macFas5.chr13 1321240 6 - 111193037 ACATTT i macFas5.chr13 C 0 C 0 s calJac3.chr14 1306156 6 - 108792865 ACCTTA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1151533 6 - 7082604 ACGTTA i saiBol1.JH378218 C 0 C 0 e cebCap1.NW_016107827v1 1244940 3 + 1864846 I e otoGar3.GL873658 886379 326 + 5252280 I e dasNov3.JH576208 1561715 0 + 4416731 C e colAng1.NW_012118821v1 1290032 0 - 13651311 C e manLeu1.NW_012103754v1 851013 1605 - 2200435 I e chlSab2.chr14 1372144 0 - 107702431 C e cerAty1.NW_012000820v1 1302167 0 - 10304083 C e macNem1.NW_012011978v1 1349342 0 + 3644372 C e rheMac8.chr13 1349043 0 + 108979918 C e nomLeu3.chr19 1003783 63 + 81552678 T a score=5468.000000 s hg38.chr2_KI270774v1_alt 5737 3 + 223625 ATG s panTro5.chr2A 1284752 3 + 111504155 ATG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1246899 3 + 114371477 ATG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1272611 3 + 1464242 ATG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1003720 3 + 81552678 ATA i nomLeu3.chr19 T 63 C 0 s macFas5.chr13 1321246 2 - 111193037 -TA i macFas5.chr13 C 0 T 57 s calJac3.chr14 1306162 3 - 108792865 ATG i calJac3.chr14 C 0 T 60 s saiBol1.JH378218 1151539 3 - 7082604 ATG i saiBol1.JH378218 C 0 T 60 e cebCap1.NW_016107827v1 1244940 3 + 1864846 I e otoGar3.GL873658 886379 326 + 5252280 I e dasNov3.JH576208 1561715 0 + 4416731 C e colAng1.NW_012118821v1 1290032 0 - 13651311 C e manLeu1.NW_012103754v1 851013 1605 - 2200435 I e chlSab2.chr14 1372144 0 - 107702431 C e cerAty1.NW_012000820v1 1302167 0 - 10304083 C e macNem1.NW_012011978v1 1349342 0 + 3644372 C e rheMac8.chr13 1349043 0 + 108979918 C a score=1000.000000 s hg38.chr2_KI270774v1_alt 5740 1 + 223625 C s panTro5.chr2A 1284755 1 + 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1246902 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1272614 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1003723 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 e saiBol1.JH378218 1151542 60 - 7082604 T e cebCap1.NW_016107827v1 1244940 3 + 1864846 I e otoGar3.GL873658 886379 326 + 5252280 I e dasNov3.JH576208 1561715 0 + 4416731 C e calJac3.chr14 1306165 60 - 108792865 T e colAng1.NW_012118821v1 1290032 0 - 13651311 C e manLeu1.NW_012103754v1 851013 1605 - 2200435 I e chlSab2.chr14 1372144 0 - 107702431 C e cerAty1.NW_012000820v1 1302167 0 - 10304083 C e macNem1.NW_012011978v1 1349342 0 + 3644372 C e macFas5.chr13 1321248 57 - 111193037 T e rheMac8.chr13 1349043 0 + 108979918 C a score=8665.000000 s hg38.chr2_KI270774v1_alt 5741 8 + 223625 TCACTGGA s panTro5.chr2A 1284756 8 + 111504155 TCACTGGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1246903 8 + 114371477 TCACTGGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1272615 8 + 1464242 TCACTGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1003724 8 + 81552678 TCACTGGA i nomLeu3.chr19 C 0 C 0 s otoGar3.GL873658 886705 8 + 5252280 TCACATAA i otoGar3.GL873658 I 326 C 0 e saiBol1.JH378218 1151542 60 - 7082604 T e cebCap1.NW_016107827v1 1244940 3 + 1864846 I e dasNov3.JH576208 1561715 0 + 4416731 C e calJac3.chr14 1306165 60 - 108792865 T e colAng1.NW_012118821v1 1290032 0 - 13651311 C e manLeu1.NW_012103754v1 851013 1605 - 2200435 I e chlSab2.chr14 1372144 0 - 107702431 C e cerAty1.NW_012000820v1 1302167 0 - 10304083 C e macNem1.NW_012011978v1 1349342 0 + 3644372 C e macFas5.chr13 1321248 57 - 111193037 T e rheMac8.chr13 1349043 0 + 108979918 C a score=6876.000000 s hg38.chr2_KI270774v1_alt 5749 2 + 223625 GT s panTro5.chr2A 1284764 2 + 111504155 GT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1246911 2 + 114371477 GT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1272623 2 + 1464242 GT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1003732 2 + 81552678 GT i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1306105 2 - 108792865 GT i calJac3.chr14 T 60 C 0 s saiBol1.JH378218 1151482 2 - 7082604 GT i saiBol1.JH378218 T 60 C 0 s cebCap1.NW_016107827v1 1244943 2 + 1864846 GT i cebCap1.NW_016107827v1 I 3 C 0 s otoGar3.GL873658 886713 2 + 5252280 GT i otoGar3.GL873658 C 0 C 0 e dasNov3.JH576208 1561715 0 + 4416731 C e colAng1.NW_012118821v1 1290032 0 - 13651311 C e manLeu1.NW_012103754v1 851013 1605 - 2200435 I e chlSab2.chr14 1372144 0 - 107702431 C e cerAty1.NW_012000820v1 1302167 0 - 10304083 C e macNem1.NW_012011978v1 1349342 0 + 3644372 C e macFas5.chr13 1321248 57 - 111193037 T e rheMac8.chr13 1349043 0 + 108979918 C a score=4167065.000000 s hg38.chr2_KI270774v1_alt 5751 575 + 223625 TTCATCAGTTCTAAAGAGAAAATTGTTCCTACTATCATTAAAATGAGATAC--CTTAATGACTCCATGCAGATGCATACAGAAGTTTCTGATATTCCCACATATATATCCATGAAGCAGAGGTTGTGCCTTGAAAGCAGGGCA----CATTTTACTGAAGAATC---AT---GTCTCTGGGAGAAACACTACCGTGTA-TTTTTCACTCTATAATGAT-CTGTGAGAGTAAACCCCACTGAAAATTACGCCTCTGCCATCAATGAGTCAGCCGAGTGTGCCAGCCGCAGATGGAGGAAGATTGGGCGTGG--GCACCTGAGTGTTTAGGACCA-CGGA-GGGGGTGGCAGACCAGAAGGAAATTGGGGTGTTTCTGATACTGAGACCTGGCTGCTGAGTTTTCTTGGCAGGAGCACCGATCGATGCCCACAGCATTTATCACTGAAAAGACTGAATCGAGGGTGCTGAGAAAACTATTTCAGGAAGCCAGATGGTGCCAGGAGGGAGGGCCAGTCCCAGCAAAATGTCA---TCCAACAGAGAATTTCCCATCTCCC-TGTGCATGAACCAGGGGCTTCTAAATG-TTCTCATGCAGA s panTro5.chr2A 1284766 575 + 111504155 TTCATCAGTTCTAAAGAGAAAATTGTTCCTACTATCATTAAAATGAGATAC--CTTAATGACTCCATGCAGATGCATACAGAAGTTTCTGATATTCCCACATATATATCCATGAAGCAGAGGTTGTGCCTTGAAAGCAGGGCA----CATTTTACTGAAGAATC---AT---GTCTCTGGGAGAAACACTACCGTGTA-TTTTTCACTCTATAATGAT-CTGTGAGAGTAAACCCCACTGAAAATTACGCCTCTGCCATCAATGAGTCAGCCGAGTGTGCCAGCCGCAGACGGAGGAAGATTGGGCGTGG--GCACCTGCGTGTTTAGGACCA-CGGA-GGGGGTGGCAGACCAGAAGGAAATTGGGGTGTTTCTGATACTGAGGCCTGGCTGCTGAGTTTTCTTGGCAGGAGCACCGATCGATGCCCACAGCATTTATCACTGAAACGACTGAATCGAGGGTGCTGAGAAAACTATTTCAGGAAGCCAGATGGTGCCAGGAGGGAGGGCCAGTCCCAGCAAAATGTCA---TCCAACAGAGAATTTCCCATCTCCC-TGTGCGTGAACCAGGGGCTTCTAAATG-TTCTCATGCAGA i panTro5.chr2A C 0 I 126 s panPan2.chr2A 1246913 575 + 114371477 TTCATCAGTTCTAAAGAGAAAATTGTTCCTACTATCATTAAAATGAGATAC--CTTAATGACTCCATGCAGATGCATACAGAAGTTTCTGATATTCCCACATATATATCCATGAAGCAGAGGTTGTGCCTTGAAAGCAGGGCA----CATTTTACTGAAGAATC---AT---GTCTCTGGGAGAAACACTACCGTGTA-TTTTTCACTCTATAATGAT-CTGTGAGAGTAAACCCCACTGAAAATTACGCCTCTGCCATCAATGAGTCAGCCGAGTGTGCCAGCCGCAGACGGAGGAAGATTGGGCGTGG--GCACCTGCGTGTTTAGGACCA-CGGA-GGGGGTGGCAGACCAGAAGGAAATTGGGGTGTTTCTGATACTGAGGCCTGGCTGCTGAGTTTTCTTGGCAGGAGCACCTATCGATGCCCACAGCATTTATCACTGAAACGACTGAATCGAGGGTGCTGAGAAAACTATTTCAGGAAGCCAGATGGTGCCAGGAGGGAGGGCCAGTCCCAGCAAAATGTCA---TCCAACAGAGAATTTCCCATCTCCC-TGTGCGTGAACCAGGGGCTTCTAAATG-TTCTCATGCAGA i panPan2.chr2A C 0 I 62 s gorGor5.CYUI01015607v1 1272625 574 + 1464242 TTCATCAGTTCTAAAGAGAAAATTGTTCCTACTATCATTAAAATGAGATAC--CTTAATGACTCCATGCAGATGCATACAGAAGTTTCTGATATTCCCACATATATACCCATGAAGCAGAGGTTGTGCCTTGAAAGCAGGGCA----CATTTTACTGAAGAATC---AT---GTCTCTGGGAGAAACACTACTGTGTA-TTTTTCACTCTATAATGAT-CTGTGAGAGTAAACCCCACTGAAAATTACGCCTCTGCCATCAATGAGTCAGCCGAGTGTGCCAGCCGCAGACGGAGGAAGATTGGGCATGG--GCACCTGCGTGTTTAGGA-CA-CGGA-GGGGGTGGCAGACCAGAAGGAAATTGGGGTGTTTCCGATACTGAGGCCTGGCTGCTGAGTTTTCTTGGCAGGAGCACCGATCGATGCCCACAGCATTTATCACTGAAAAGACTGAATCGAGGGTGCTGAGAAAACTATTTCAGGAAGCCAGATGGTGCCAGGAGGGAGGGCCAGTCCCAGCAAAATGTCA---TCCAACAGAGAATTTCCCATCTCCC-TGTGCGTGAACCAGGGGCTTCTAAATG-TTCTCATGCAGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1003734 571 + 81552678 TTCATCAGTTCTAAGGAGAAAATTGTTCCTACTATCATTAAAATGAGGTAC--CTTAATGACTCCATGCAGATGCATACAGAAGTTTCTGATATTCCCACATATATATCCATGAAGCAGAGGTTGTGCCTTGAAAGCAGGGCA----CATTTTACTGAAGAATC---AT------TCTGGGAGAAACACTACCGTGTG-TTTCTCACTCCATAATGAT-CAGTGAGAGTAAACCCCACTGAAAATTATGCCTCTGCCATCAGTGAGTCAGCCGTGTGTGCCAGCCGCAGACACAGGAAGATTGGGCGTGG--GCACCTGCGTGTTTAGGACCA-CGGA-GAGTATGGCAGACCAGAAGGAATTTGGGGTGTTTCCAATACTGAGGCCTGGCTGCTGAGTTTTCTCGGCAGGAGCACCAATCGATGCCCACAGCATTTATCACTGAAAAGACTGAATCGAGGGTGCTGAGAAAACTATTTCA-GAAGCCAGATGGTGCCAGGAGGGAGGGCCAGCCCCAGCAAAATGTCA---TCCAACAGAGAATTTCCCATCTCCC-TGTGCGTAAACCAGGGGCTTCTAAGTG-TTCTCATGCAGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1349043 538 + 108979918 -------------------------------CTATCATTAAAATGAGATACATTTTAATGACTCCATACAGATACCTACAGAAGTTTCTGATGTTCCCACATATATATCCATGAAGCAGAGGCTGTGCCTTGAAAGCAAGGCA----CAATTTACTGCAGAATC---AT---GTCTCTGGGAGAAACACTACTGTGTA-TTTTTCACTCTATAATGAT-CTGTGAGAGTAAACCCCACTGAAAATTATGCCTCTGCCATCAGTGAGTCGGCTGAGTGTGCCAGCCACAGACGGA--------GGGCTTGG--GCACCTGCGTGTTTAGGACCA-CTGA-GGGGTTGGCAGACCAGAAGGAATTTGGGGTGTTTCTGAAACTGAGGCCTGGCTGCTGAGTTTTCTCGGCAGGAGTGCCGATTGATGCCCACAGCATTTATCACTGAAAAGACTGAATCGAGGGTGCTGAGAAAACTATTTCAGGAAGCCAGATGGTGCCAGGAGGGAGGGCCAGCCCCAGCAAAATGTCA---CCCAACAGAGAATTTCCCATCTCCC-TGTCTGTAAACCAGGGGCTTCTAAATG-TTCTCATGCAGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1321191 569 - 111193037 TTCATCAGTTCTAAGGAGAAAACTGTTCCTACTATCATTAAAATGAGATACATTTTAATGACTCCATACAGATACCTACAGAAGTTTCTGATGTTCCCACATATATATCCATGAAGCAGAGGCTGTGCCTTGAAAGCAAGGCA----CAATTTACTGCAGAATC---AT---GTCTCTGGGAGAAACACTACTGTGTA-TTTTTCACTCTATAATGAT-CTGTGAGAGTAAACCCCACTGAAAATTATGCCTCTGCCATCAGTGAGTCGGCTGAGTGTGCCAGCCACAGACGGA--------GGGCTTGG--GCACCTGCGTGTTTAGGACCA-CTGA-GGGGTTGGCAGACCAGAAGGAATTTGGGGTGTTTCTGAAACTGAGGCCTGGCTGCTGAGTTTTCTCGGCAGGAGCGCCGATTGATGCCCACAGCATTTATCACTGAAAAGACTGAATCGAGGGTGCTGAGAAAACTATTTCAGGAAGCCAGATGGTGCCAGGAGGGAGGGCCAGCCCCAGCAAAATGTCA---CCCAACAGAGAATTTCCCATCTCCC-TGTCTGTAAACCAGGGGCTTCTAAATG-TTCTCATGCAGA i macFas5.chr13 T 57 C 0 s macNem1.NW_012011978v1 1349342 538 + 3644372 -------------------------------CTATCATTAAAATGAGATACATTTTAATGACTCCATACAGATACCTACAGAAGTTTCTGATGTTCCCACATATATATCCATGAAGCAGAGGTTGTGCCTTGAAAGCAAGGCA----CAATTTACTGCAGAATC---AT---GTCTCTGGGAGAAACACTACTGTGTA-TTTTTCACTCTATAATGAT-CTGTGAGAGTAAACCCCACTGAAAATTATGCCTCTGCCATCAGTGAGTCGGCTGAGTGTGCTAGCCACAGACGGA--------GGGCTTGG--GCACCTGCGTGTTTAGGACCA-CTGA-GGGGTTGGCAGACCAGAAGGAATTTGGGGTGTTTCTGAAACTGAGGCCTGGCTGCTGAGTTTTCTCGGCAGGAGCGCCGATTGATGCCCACAGCATTTATCACTGAAAAGACTGAATCGAGGGTGCTGAGAAAACTATTTCAGGAAGCCAGATGGTGCCAGGAGGGAGGGCCAGCCCCAGCAAAATGTCA---CCCAACAGTGAATTTCCCATCTCCC-TGTCTGTAAACCAGGGGCTTCTAAATG-TTCTCATGCAGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1302167 538 - 10304083 -------------------------------CTATCATTAAAATGAGATACATTTTAATGACTCCATGCAGATACATACAGAAGTTTCTGATATTCCCACATATATATCCATGAAGCTGAGGTTGTGCCTTGAAAGCAAGGCA----CAATTTACTGCAGAATC---AT---GTCTCTGGGAGAAACACTACTGTGTA-TTTTTCACTCTATAATGAT-CTGTGAGAGTAAACCCCACTGAAAATTACGCCTGTGCCATCAGTGAGTTGGCTGAGTGTGCCAGCGACAGACGGA--------GGGCTTGG--GCACCTGCGTGTTTAGGACCA-CTGA-GGGGGTGGCAGAGCAGAAGGAATTTGGGGTGTTTCTGAAACTGAGGCCTGGCTGCTGAGTTTTCTCGGCAGGAGCGCCGATCGATGCCCACAGCATTTATCACTGAAAAGACTGAATCGAGGGTGCTGAGAAAACTATTCCAGGAAGCCAGATGGTGCCAGGAGGGAGGGCCAGCCCCAGCAAAATGTCA---CCCAACAGAGAATTTCCCATCTCCC-TGTCTGTAAACCAGGGGCTTCTAAATG-TTCTCATGCAGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1372144 539 - 107702431 -------------------------------CTATCATTAAAATGAGCTACATTTTAATGAGTCCATGCAGATACATTCAGAAGTTTCTGATATTCCCACATATATATCCATGAAGCAGAGGTTGTGCCTTGAAAGCAAGGCA----CAATTTACTGCAGAATC---AT---GTCTCTGGGAGAAACACTACTGTGTATTTTTTCACTCTATAATGAT-CTGTGAGAGTAAACCCCACTGAAAATTACGCCTGTGCCATCAGTGAGTCAGCTGAGTGTGCCAGCCACAGACGGA--------GGGCTTGG--GCACCTGCATGTTTAGGACCA-CTGA-GGGGGTGGCAGACCAGAAGGAATTTGGGGTGTTTCTGAAACTGAGGCCTGGCTGCTGAGTTTTCTCGGCAGGAGCGCCAATCGATGCCCACAGCATTTATCACTGAAAAGACTGAATCGAGGGTGCTGAGAAAACTATTTCAGGAAGCCAGATGGTGCCAGGAGGGAGGGCCAGCCCCAGCAAAATGTCA---GCCAACAGAGAATTTCCCATCTCCC-TGTCTGTAAACCGGGGGCTTCTAAATG-TTCTCATGCAGA i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1290032 537 - 13651311 -------------------------------CTATCATTAAAATAAGATACATTTTAATGACTCCATGCAGATACATACAGATGTTTCTGATATTCCCACATATATGTCCATGAAGCGGAGGTTGTGCCTTGAAAGCAAGGCA----CAATTTACTGCAGAATC---AT---GTCTCTGGGAGAAACACTACTGTGTA--TTTTCACTCTATAATGAT-CTGTGAGAGTAAACCCCACTGAAAATTACGCCTCTGCCATCAGTGAGTCAGCTGAGTGTGCCAGCCACAGATGGA--------GGGCTTGG--GCACCTGCGTGTTTAGGACCA-CTGA-GGGGGTGGCAGGCCAGAAGGAATTTGGGGTGTTTCTGAAACTGAGACCTGGCTGCTGAGCTTTCTCGGCAGGAGTGCCAATCGATGCCCACAGCATTTATCACTGAAAAGACTGAATCGAGGGTGCTGAGAAAACTATTTCAGGAAGCCAGATGGTGCCAGGAGGGAGGGCCAGCCCCAGCAAAACATCA---CCCAACAGAGAATTTCCCATCTCCC-TGTATGTAAACCAGGGGCTTCTAAATG-TTCTCATGCAGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1306107 529 - 108792865 TTCATCAGTTCTAAGGAGAAAATTGTTCCTGTTCCCATGAAAATGAGGTAC--CTTAATGACTACACACAGATGCATGCGGAAGCTTCTGCTATTCCCAAACGTATAGCCGTGAAGCAGACATTGTGCATTGAAAGCAAGGTC----CAGTTTAATGGAGAATA---AT--------------------------GTA-TCTTTCACTCTGTAATGAT-TTGTGAGAGTCAACCCCACTGAAAATTACGCCTCTGCCATCAGTGAGTCGTCCAACTGTGCCAGCCACTGATGGAGGAAGACTCGGTGTGG--GCGCCTGTGAGTTTAGGACCA-CTAAGGGGGGTGGCAGAGCAGAAGGAATTTGGGGTGTTTCCGAAACTGGGGCCTGGCCACCCAGTTTTCTTGGCAG------------------ACAGCATTT---ATTGACAAAACTGAATCAAGGGTACTGAGAAAA--GTTTCAGGAAGCCAGATGGTGCCGGGAGGCAGGGCCAACCCCAGCAAAATGTCA---CCCAACAGAGAATTT-CCATCTCCC-TGTGCATGAACCAGGGGCTTCTAAATG-TCCTCATGCAGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1151484 532 - 7082604 TTCATCAGTTCTAAGGAGAAAATTGTTCCTATTACCATTAAAATGAGATAC--GTTAATGACTACATACAGATGCATACAGAAGTTTCTGATATTCCCAAATATATATTCATGAAGCAGAGATTGTGCATTGAAAGCAAGGTA----CAGTATAATGAAGAATA---AT--------------------------GTA-TTTTTCACTCTATAATGAT-CTGTGAGAGTCCACCCCACTGAAAATTATGCCTGTGCCATCAGTGAGTAGTCCAAGTGTGCCAGCCACTGATGGAGAAAGACTGGGTGTGG--GCACCTGCGA-----------------GGGAGTGGCAGAGCAGAAGGAATTTGGGGTGTTTCCAAAACTGAGGCCTGGCTGCCCAGTTTTCTTGGCAGGATCACC----AATGCAAACGGCATTTGTCACTGAGAAAACTGAATCGAGGGTGCTGAGAAGACTATTTCAGGAAGCCAGATGGTGCCACGAGGCAGGGCCAACCCCAGCAAAACGTCA---CCCAACAGAGAATTT-CCATCTTCC-TGTGCGTGAACCAGGGGCTTCGAAATG-TTCTCATGCAGA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1244945 531 + 1864846 TTCATCAGTTCTAAGGAGAAAATTGTTCCTATTACCATTAAAATGAGATAC--CTTAATGACTACATACGGATGCATACAGAAGTCTCTGATATTCCCAAATATATATCCATGAAGCACAGATTGTGCATTGAAAGCAAGGTA----CAGTTTAATGAAGAATA---AT--------------------------GTA-TTTTTCACTCTATAATGAT-CTGTGAGAGTCAACCCCACTGAAAATTATGCCTCTGCCATCAGTGAGTCGTCCAAGTGTGCCAGCCACTGATGGAGGAAGACTGGGTGTGG--GCACCTGTGA-----------------GGGGATGGCAGAGCAGAAGGAATTTGGGGTGTTTCCGAAACTGAGGCCTGGCTGCCCAGTTTTCTTGGCAGGAGCACC----GACACAAACAGCATTTATCACTGATACAACGGAATCGAGGGTGCTGAGAAAACTATTTCAGG-AGCCAGATGGTGCCAGGAGGCAGGGCCAACCCCAGCAAAATGTCA---CCCAACAGAGAATTT-CCATCTCCC-TGTGCGTGGGCCAGGGGCTTCTAAATG-TTCTGATGCAGA i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 886715 533 + 5252280 TATATCAATTTTCAGGAAAGTAT--TTCCTATTATTATTGAAATGAAATGC--TTTGACCA------ACAGCTG-ATACAAACATTTCTCATG-TCCCACATCAGCATCCTCAGCACAG---CTGGGCAGTGGATGCAAGGCAGGGTCACTTCAC--AAGAACCACGAT---GTCCTTGGTGGGCACAACTGCCTGTG-GCTTCGCCCCCCCTATGAT-CTGGGAGAACAAACCCCACTGGACATGCCTCCTCCGCCATCAGTGAGTCAGCCGAG-GTGGTAGACACAGACGA---------CTTTGAGG--GCACATATGTATTGAACCCCA-TCCA-AGGACTGGGGAGGTGGAAGCAATTTGGGACGTTTCTGAAACTGAAGTT---CAACAAAG-------GGCATTAGCACC----AAGGCTT---GGGTTACCCACTGTGCTGGCTG------GCCAGCCAAGAAGATTG-TCCAGAGAGCC---TGGTAAGTGCAGGGGAGGCCAGG-CAGGCAGAGGGTCAGTTGCCAAGCAGGGGCTGCCCGTCTCCG-TGCTCGGAGACCAGTGGTGACTGGACACTTCTAGTGCAGG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1561715 549 + 4416731 --------------------------CCCTATTCTCAATAAAATTAAATAA--CTAAATTGCTATACAGAGTAGCATATATAAGTTTCTGTTATTCCCATATAGGTATCAATAAAAGACAGTTTGGTCATTGAAGGCAATGCA----CAGTTTAATGAAGAATA---ATTATGTCTTTGGGAGAAACAATAGCATATA-TTTTTCACTGTGTAATGATATTGTGAGGATCAACTCCATGGAAAATTATTCCACTGACATCAAAGAGTCA----AATATGTCAAATTTGGAGAAATGAAGATCGAATGTGGGTGCAAGTATATATTTAGAACTGTTTGA-GGGCTTGAGAAAGTAGAAATAATTTGGAGTATTTCTGCCAATGAAGTTTGACTGCTGTGCTTTCTTTGCAA-AGAGCC--TTGATACCCACTGCATTTATTATTGATATGGCTGAATTAGTAGTGCTG-GAAAACTATTTCAAGAAGCCAGATGGTGCAGAGAGGGAGATACAACCAAGGCAAAATGTCA---TCAAATAGAGAATTTCGCATCTCCTGTGTATATGAACCAGAAACTATGAAATG-TTCTAGTGCAGA i dasNov3.JH576208 C 0 C 0 e manLeu1.NW_012103754v1 851013 1605 - 2200435 I a score=1093708.000000 s hg38.chr2_KI270774v1_alt 6326 135 + 223625 CGGATATCAAAAGGAA-GAGCATAAACAATTAATATGATACATGTGAAGCACAACGCCCCCTTCCCTAATACAGATCTGAAATTATTTTTA-AAATTCTCATCTCAAGAAAATGAAAACAAAAGCAAAGCCttcttt s panTro5.chr2A 1285467 135 + 111504155 CGGATATCAAAAGGAA-GAGCATAAACAATTAATATGACACATGTGAAGCACAACGCCCCCTTCCCTAATACAGATCTGAAATTATTTTTA-AAAATCTCATCTCAAGAAAATGAAAACAAAAGCAAAGCCTTCTTT i panTro5.chr2A I 126 C 0 s panPan2.chr2A 1247550 135 + 114371477 CGGATATCAAAAGGAA-GAGCATAAACAATTAATATGACACATGTGAAGCACAACGCCCCCTTCCCTAATACAGATCTGAAATTATTTTTA-AAAATCTCATCTCAAGAAAATGAAAACAAAAGCAAAGCCTTCTTT i panPan2.chr2A I 62 C 0 s gorGor5.CYUI01015607v1 1273199 135 + 1464242 TGGATATCAAAAGGAA-GAGCATAAACAATTAATATGATACATGTGAAGCACAACGCCCCCTTCCCTAATACAGATCTGAAATTATTTTTA-AAAATCTCATCTCAAGAAAATGAAAACAAAAGCAAAGGCttcttt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1004305 135 + 81552678 TGGATATCAAAAGGAA-GAGCATAAACAATTAATATGATACATGTGAAGCACAACGCCCCCTTCCCTAATACAGATCTGAAATTATTTTTT-AAAATCTTATCTCAAGAAAATGAAAACAAAAGCAAAGCCTTCTTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1349581 135 + 108979918 TGGATATCAAAAGGAA-GAGCATAAACAATTAATATGATACTCGTGAAGCGCAACGCCCCCTTCCCAAATACAGATCCGAAATTATTTTTT-AAAATCTCGTCTCAAGAAAATGAAAACAAAAGCAAAGccttcctt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1321760 135 - 111193037 TGGATATCAAAAGGAA-GAGCATAAACAATTAATATGATACTCGTGAAGCGCAACGCCCCCTTCCCAAATACAGATCCGAAATTAGTTTTT-AAAATCTCGTCTCAAGAAAATGAAAACAAAAGCAAAGccttcctt i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1349880 135 + 3644372 TGGATATCAAAAGGAA-GAGCATAAACAATTAATATGATACTCGTGAAGCGCAACGCCCCCTTCCCAAATACAGATCCGAAATTATTTTTT-AAAATCTCGTCTCAAGAAAATGAAAACAAAAGCAAAGccttcctt i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1302705 135 - 10304083 TGGATATCAAAAGGAA-AAGCATAAACAATTAATATGATACTCGTGAAGCGCAACGCCCCCTTCCCAAATACAGATCCGAAATTATTTTTT-AAAATCTCGTCTCAGGAAAATGAAAACAAAAGCAAAGccttcctt i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1372683 135 - 107702431 TGGATATCAAAAGGAA-GAGCATAAACAATTAATATGATACTCGTGAAGCACAACGCCCCCTTCCCAAATACAGATCCGAAATTATTTTTT-AAAATCTCGTCTCAAGAAAATGAAAACAAAAGCAAAGccttcctt i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1290569 135 - 13651311 TGGATATCAAAAGGAA-GAGGATAAACAATTAATATGATACTCGTGAAGCGCAACGCCCCCTTCCCAAATACAGATCCGAAATTATTTTTT-AAAATCTTGTCTCAAGAAAATGAAAACAAAAGCAAAGccttcctt i colAng1.NW_012118821v1 C 0 I 4 s calJac3.chr14 1306636 135 - 108792865 TGGATACCAAGAGGAA-GAGTATAAACAGTTAACATGATACATGTGAAGTGCAACGCCCCCTTCCCAAATACCGCTCCGAAATTATTTTTA-AAAATCCTGTCTCAAGAAAGTGAAAACAAAAGCAAAGCTGCCTGT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1152016 134 - 7082604 CGGATACCAAGAGGAA-GAGCAGACACAATTAACATGATACGTGTGAAGTGCAACG-CCCCTTCCCAAATACAGCTCCGAAATTATTTTTT-AAAATCTTGTCTCAAGAAAGTGAAAACAAAAGCAAAGCCGCCTTT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1245476 135 + 1864846 TGGATACCAAGAGGAA-GAGCATAAACAATTAACATGATACACGTGAAGTGCAACGCCCCCTTCCCAAATACAGCTCCAAAATTATTTTAA-AAAATCTTGTCTCAAGAAAGTGAAAACAAAAGCACAGCCGccttt i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 887248 114 + 5252280 TGACTATGAGTTAGTA-GATGGCAA--------------------GAAACACAGAGCCCGCCCCCCCGACATAGATCTGACattattttttaaaaataatatCTTATGGAAACTAGAACAAAAGCAAAGGCTTCT-- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1562264 130 + 4416731 TGGATACGAACAAGAACCAAAAGAAAGAATTAATAAGATACACATGAAATGCAAC--CCCCTTCTCAAATACTTCTCTAAAATTATTTTTT----ATCAATTCTCAAATAAGTTAGAACAAAAATATAGCTTTTTT- i dasNov3.JH576208 C 0 C 0 e manLeu1.NW_012103754v1 851013 1605 - 2200435 I a score=80052.000000 s hg38.chr2_KI270774v1_alt 6461 15 + 223625 ctccctccctccttc s panTro5.chr2A 1285602 15 + 111504155 cttcctccctccttc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1247685 15 + 114371477 cttcctccctccttc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1273334 15 + 1464242 cttcctccctccttc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1004440 15 + 81552678 cttcctccctccttc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1349716 15 + 108979918 cttccttctttcctc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1321895 15 - 111193037 cttccttctttcctc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1350015 15 + 3644372 cttccttctttcctc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1302840 15 - 10304083 cttcctcccttcttc i cerAty1.NW_012000820v1 C 0 I 676 s manLeu1.NW_012103754v1 852618 14 - 2200435 -ctccttccttcctt i manLeu1.NW_012103754v1 I 1605 I 1 s colAng1.NW_012118821v1 1290708 15 - 13651311 ctcccttcctccttc i colAng1.NW_012118821v1 I 4 I 40 s calJac3.chr14 1306771 15 - 108792865 CTCCCTCCCTCATCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1152150 10 - 7082604 Ctccctccct----- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1245611 15 + 1864846 ctccctccctctttt i cebCap1.NW_016107827v1 C 0 C 0 e otoGar3.GL873658 887362 0 + 5252280 C e dasNov3.JH576208 1562394 0 + 4416731 C e chlSab2.chr14 1372818 0 - 107702431 C a score=107477.000000 s hg38.chr2_KI270774v1_alt 6476 46 + 223625 cttgcctccctccctcct---tccttccttcctttccttctttcttcct s panTro5.chr2A 1285617 30 + 111504155 cttccttcctttcctcct---tcctt----------------tcttcct i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1247700 30 + 114371477 cttccttcctttcctcct---tcctt----------------tcttcct i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1273349 26 + 1464242 cttccctcccgccctcct---tcctt--------------------cct i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1004455 30 + 81552678 cttccttccctccttcct---tcctt----------------ccttccc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1349731 42 + 108979918 cttccttccctccctccc---tcactccctccc----tccttccttcct i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1321910 46 - 111193037 cttccttccctccctccc---tcactccctccctccttccttccttcct i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1350030 42 + 3644372 cttccttccctccctccc---tcactccctccc----tccttccttcct i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1372818 25 - 107702431 -----cttcctcccttcc---tccttcct----------------cccc i chlSab2.chr14 C 0 I 4 s manLeu1.NW_012103754v1 852633 46 - 2200435 ctttcctccttccctccc---tccttccttccttctttcctttcctcct i manLeu1.NW_012103754v1 I 1 I 4 s colAng1.NW_012118821v1 1290763 47 - 13651311 cttccttccctccctccc--ttccttccttccttccttcctttcctcct i colAng1.NW_012118821v1 I 40 C 0 s calJac3.chr14 1306786 46 - 108792865 -cttcctcccttcctccc--gtttcttccttcctccctccctccttcct i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1245626 48 + 1864846 -cttcctcccttcctcccttgtttcttcattcctccctccctccttcct i cebCap1.NW_016107827v1 C 0 C 0 e saiBol1.JH378218 1152160 0 - 7082604 C e otoGar3.GL873658 887362 0 + 5252280 C e dasNov3.JH576208 1562394 0 + 4416731 C e cerAty1.NW_012000820v1 1302855 676 - 10304083 I a score=2436480.000000 s hg38.chr2_KI270774v1_alt 6522 308 + 223625 tccct--------ccttccttccttccttct----------ctccttc-cttcc------------ttc-----------------------------------------------------------------ctttcttctttccttcccttccttctcttctctttcCATTTTTAAAA-TTAATAACCTTTGATAGAAGGCTGGATAGTCGATTCATTCCAGAAAAATGAGTTGACTACTTTTAGGATGTTTGAACACAACATCTTTGTTTTGG-TTTTAAGTCTCTCAATAGCTGCATCCAGA--AACACAATATTCAAACTAACAAAAAAATATAGTTGAATCAAATCTTT----TTTCTAAGCAGTGGCAACAAGCAAGTGTATTATCAT-TCAGTAACTAAAGTTT s panTro5.chr2A 1285647 303 + 111504155 tccct--------ccttccttccttccttct----------ctccttc-cttcc------------ttc-----------------------------------------------------------------ctttcttctttccttcccttccttcTCTT-----TCCATTTTTAAAA-TTAATAACCTTTGATAGAAGGCTGGATAGTCGATTCATTCCAGAAAAATGAATTGGCTACTTTTAGGATGTTTGAACACAACATCTTTGTTTTGG-TTTTAAGTCTCTCAATAGCTGCATCCAGA--AACACAATATTCACACTAACAAAAAAATATAGTTGAATCAAATCTTT----TTTCTAAGCAGTGGCAACAAGCAAGTGTATTATCAT-TCAGTAACTAAAGTGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1247730 303 + 114371477 tccct--------ccttccttccttccttct----------ctccttc-cttcc------------ttc-----------------------------------------------------------------ctttcttctttccttcccttccttcTCTT-----TCCATTTTTAAAA-TTAATAACCTTTGATAGAAGGCTGGATAGTCGATTCATTCCAGAAAAATGAATTGGCTACTTTTAGGATGTTTGAACACAACATCTTTGTTTTGG-TTTTAAGTCTCTCAATAGCTGCATCCAGA--AACACAATATTCACACTAACAAAAAAATATAGTTGAATCAAATCTTT----TTTCTAAGCAGTGGCAACAAGCAAGTGTATTATCAT-TCAGTAACTAAAGTGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1273375 308 + 1464242 ttcct--------tcttcctttcttctttct----------ctccttc-cttcc------------ttc-----------------------------------------------------------------ctttcttctttccttcccttccttctcttctctttcCATTTTTAAAA-TTAATAACCTTTGATAGGAGGCTGGATAGTCGATTCATTCCAGAAAAATGAATTGGCTACTTTTAGGATGTTTGAACACAACATCTTTGTTTTGG-TTTTAAGTCTCTCAATAGCTGCATCCAGA--AACACAATATTCAAACTAACAAAAAAATATAGTTGAATCAAATCTTT----TTTCTAAGCAGTGGCAACAAGCAAGTGTATTATCAT-TCAGTAACTAAAGTGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1004485 308 + 81552678 ttctt--------ccttccttccttccttcc----------ttccttc-cttcc------------ttc-----------------------------------------------------------------cttccttctttccctcccttccttctcttcTCTTTCCATTTTTTAAA-ATAATAACCTTTGATAGAAGGCTGGATAGTCAATTCATTCCAGAAAAATGAATTGGCTACTTTTAGGATGTTTGAACACAACATCTTCGTTTTGG-TTTTAAGTATCTCAATAGCTGCATCCAGA--AACACAGTATTCAAACTAACAAAAAAATATAGTTGAATCAAATCTTT----TTTCTAAGCAGTGGCAACAAGCAAGTGTATTATCAT-TCAGTAACTAAAGTGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1349773 303 + 108979918 tcctt--------ctctccttccttccttct----------ctccttc-cttcc---------------------------------------------------------------------------------ttccttctttccctcccttccttctcttctctttccatttcttAAA--TAATAACCTTTGATAGAAGGCTGGACAATTTATTCATTCCAGAAAAATGAATTGGCTACTTTTAGGATGTTTGAACACAACAACTTTGTTTTGG-TTGTAAGTCTCTCAATGGCTGAGTCCAGA--AACACAATATTCAAATGAACACAAAAATATAGTTGAATCAAATCTCT----TTTCTAAGCAGTGGCAACAAGCAAGTATATTATCAT-TCAGTAACTAACGTGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1321956 303 - 111193037 tctct--------ccttccttccttccttct----------ctccttc-cttcc---------------------------------------------------------------------------------ttccttctttccctcccttccttctcttctctttccatttcttAAA--TAATAACCTTTGATAGAAGGCTGGACAATTTATTCATTCCAGAAAAATGAATTGGCTACTTTTAGGATGTTTGAACACAACATCTTTGTTTTGG-TTGTAAGTCTCTCAATGGCTGAGTCCAGA--AACACAATATTCAAATGAACACAAAAATATAGTTGAATCAAATCTCT----TTTCTAAGCAGTGGCAACAAGCAAGTATATTATCAT-TCAGTAACTAACGTGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1350072 303 + 3644372 tctct--------ccttccttccttccttct----------ctccttc-cttcc---------------------------------------------------------------------------------ttccttctttccctcccttccttctcttctctttccatttcttAAA--TAATAACCTTTGATAGAAGGCTGGACAATTGATTCATTCCAGAAAAATGAATTGGCTACTTTTAGGATGTTTGAACACAACATCTTTGTTTTGG-TTGTAAGTCTCTCAATGGCTGAGTCCAGA--AACACAATATTCAAATGAATACAAAAATATAGTTGAATCAAATCTCT----TTTCTAAGCAGTGGCAACAAGCAAGTATATTATCAT-TCAGTAACTAACGTGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1303531 313 - 10304083 tccct--------ccttccttccttccttctctgtccctccctccttc-cttcc---------------------------------------------------------------------------------ttccttctttccctcccttccttctcttcTCTTTCCATTTCTTAAA--TAATAACCTTTGATAGAAGGCTGGACAATTGATTCATTCCAGAAAAATGAATTGGCTACTTTTAGGATGTTTGAACACAACATCTTTGTTTTGG-TTGTAAGTCTCTCAATGGCTGAGTCCAGA--AACACAATATTCAAATGAACACAAAAATATAGTTGAATCAAATCTCT----TTTCTAAGCAGTGGCAACAAGCAAGTATATTATCAT-TCAGTAACTAACGTGT i cerAty1.NW_012000820v1 I 676 C 0 s chlSab2.chr14 1372847 303 - 107702431 tccct--------ccttccttccttccttct----------ctccttc-cttcc---------------------------------------------------------------------------------ttccttctttccctcccttccttctcttctctttccatttcttAAA--TAATAACCTTTGATAGAAGGCTGGATAGTTGATTCATTCCGGAAAAATGAATTGGCTACTTTTAGGATGTTTGAACACAACATCTTTGTTTTGG-TTGTAAGTCTCTCAATGGCTGAGTCCAGA--AACACAATATTCAAATGAACAAAAAAATATAGTTGAATCAAATCTCT----TTTCTAAGCAGTGGCGACAAGCAAGTGTATTATCAT-TCAGTAACTAACGTGT i chlSab2.chr14 I 4 C 0 s manLeu1.NW_012103754v1 852683 303 - 2200435 tccct--------ccttccttccttccttct----------ctccttc-cttcc---------------------------------------------------------------------------------ttccttctttccttcccttccttctcttctctttccatttcttAAA--TAATAACCTTTGATAGAAGGCTGGATAGTTGATTCATTCCGGAAAAATGAATTGGCTACTTTTAGGATGTTTGAACACAACATCTTTGTTTTGG-TTGTAAGTCTCTCAATGGCTGAGTCCAGA--AACACAATATTCAAATGAACACAAAAATAGAGTTGAATCAAATCTCT----TTTCTAAGCAGTGGCAACAAGCAAGTGTGTTATCAT-TCAGTAACTAACGTGT i manLeu1.NW_012103754v1 I 4 C 0 s colAng1.NW_012118821v1 1290810 319 - 13651311 tccct--------ccttccttccttcctctt----------ctccttc-cttccttgcttctctccttc-----------------------------------------------------------------tttccttctttccctcccttccttctcttcTCTTTCCATTTCTTAAA--TAATAACCTTTGATAGAAGGCTGGATAGTTGATTCATTCCGGAAAAATGAATTGGCTACTTTTAGGATGTTTGAACACAACATCTTTGTTTTGG-TTGTAAGTCTATCAGTGACTGAGTCCAGA--AACACAATATTCAAATGAACAAAAAAATATAGTTGAATCAAATCTCT----TTTCTAAGCAGTGGCAACAAACAAGTGTATTATCAT-TCAGTAACTAACATGT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1306832 371 - 108792865 tccctacttcctcccttccatccctccttcc----------tcccttcccttcc------------ttccccttcccttcctttaccttcccttaccttaccttaccttaccttaccttcccttcccttcccttcttccttcttttc------tcattccttcctCTTTCCCTTTTTAAAAAATAATAACTTTTGATGGAGGGCTGCTGAGTTGATTCATTCCAGAAAAATGGATTGGCTGCTTTTAGGATGTTTGAACACAACATC--TGTTTTGGTTTGTGAGTCTATC-GTGGCTGTATCCAGA--AACAGAATATTCAAACTAACAA-AAAATGTAGTTGAATCAAATCACT----TTTCTAAGCAGTGGCAACGAGCAAGTGTG---TAAT-TTAGTAACCAAAATAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1152160 292 - 7082604 -------------ccttccttccctccttcc----------tcccttcccttcc--------------------------------------------------------------------------------cttccttcttttc------tctttccttcctCTTTCCCTTTTTAAAAAATAATCACCTTTGATGGAAGGCTGGTGAGTTGATTGATTCCAGAAAAATGGATTGGCTACTTTTAGGATGTTTGAACACAACATCTTTGTTTTGG-TTGTGAGTCTATC-GTGGCTGCATCCAGA--AACAGAATATTCAAACTAACAAGAAAATGTAGTTGAATCAAATCACT----TTTCTAAGCAGTGGCAATGAGCAAGTGTG---TAAT-TCAGTAACTAAAATAT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1245674 297 + 1864846 tccct--------ccttccttccctccttcc----------tcctttctcttcc--------------------------------------------------------------------------------cttccttcttttc------tcattcattcctctttccCTTTTTAAAAAATAATAACCTTTGATGGAAGGCTGGTGAGTTGATTCATTCCAGAAAAATGGATTGGCTACTTTTAGGATGTTTGAACACAACATCTTTGTTTTGG-TTCTGAGTCTATC-GTGGCTGCATCCAGA--AACAGAATATTCAAACTAACAAGAAAATGTAGTTGAATCAAATTGCT----TTTCTAAGCAGTGGCAACGAGCAAGTGTG---TAAT-TCAGTAACTAAAATAT i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 887362 269 + 5252280 -------------------GTTCTCTTCTCT----------tttcttt-cttcc---------------------------------------------------------------------------------tttctttccttattccattctttctCTGTGTTTT---GTTTTAATA--TAATAATCTCT--------GCAAGTCAGTTGATTCATCCCAGGAAAACAAGATGGCTCTGTTCAGGTGGTTGG---ACAACATCTTTGTTTGGG-CTG--AGTCTGTC-ACG--CGTATCCAGA-----ACAGTGTCCAGACTCACAGGAACGTGCAGTCCGGTGGCCTCTCT----CCTCCAGGCAGTGGCAGCAA-CAAGTGTGTTTTCCT-TCAGTCGCTGGGATTC i otoGar3.GL873658 C 0 I 77 s dasNov3.JH576208 1562394 222 + 4416731 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATGTGCTTCTCCAGCAGGCTGATAAATTGATCCATTCCAGAAAAATTAGGTAGCTGTTTTCA------CTGAGCATGACATCTTTGTTTTAG-TTTTGCATGTACC-ATGACTGTGTCTATATAACCATAATATTCAAACGAACTGAAAATTTTAGTTGATTTTAAGCCTTGACCTCTCTAAGCAGTGGCTCCTGGCAAGTACATGATCATAAAAATGGCTAAcattc i dasNov3.JH576208 C 0 C 0 a score=200293.000000 s hg38.chr2_KI270774v1_alt 6830 25 + 223625 TCAAAATGGTAAA--TTGAAGTTAAAG s panTro5.chr2A 1285950 25 + 111504155 TCAAAATGGTGAA--TTGAAGTTAAAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1248033 25 + 114371477 TCAAAATGGTGAA--TTGAAGTTAAAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1273683 25 + 1464242 TCAAAATGGTGAA--ATGAAGTTAAAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1004793 25 + 81552678 TCAAAATGGTGCA--TTGAAGTTAAAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1350076 25 + 108979918 TCAGAATGGTGAA--TTGAAGTTACAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1322259 25 - 111193037 TCAGAATGGTGAA--TTGAAGTTACAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1350375 25 + 3644372 TCAGTATGGTGAA--TTGAAGTTACAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1303844 25 - 10304083 TCAGAATGGTGAA--TTGAAGTTACAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1373150 25 - 107702431 TCAGAATGGTGAA--TTGAAGTTACAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 852986 25 - 2200435 TCAGAATGGTGAA--TTGAAGTTACAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1291129 25 - 13651311 TCAGAATGGTGAA--TTGAAGTTACAA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1307203 25 - 108792865 TCAAAATGGTGAA--CTGAAGTTATAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1152452 25 - 7082604 TCAAAATGGTGAA--CTGAAGTTACAA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1245971 24 + 1864846 TCAAAATGGTGAA--CTGAAGTCAT-A i cebCap1.NW_016107827v1 C 0 C 0 s dasNov3.JH576208 1562616 27 + 4416731 tagaaatgaggaaatatgagggtagag i dasNov3.JH576208 C 0 I 2873 e otoGar3.GL873658 887631 77 + 5252280 I a score=67886.000000 s hg38.chr2_KI270774v1_alt 6855 7 + 223625 CATTCAG s panTro5.chr2A 1285975 7 + 111504155 CATTCAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1248058 7 + 114371477 CATTCAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1273708 7 + 1464242 CATTCAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1004818 7 + 81552678 CATTCAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1350101 7 + 108979918 CATTCAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1322284 7 - 111193037 CATTCAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1350400 7 + 3644372 CATTCAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1303869 7 - 10304083 CATTCAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1373175 7 - 107702431 CATTCAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 853011 7 - 2200435 CATTCAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1291154 7 - 13651311 CATTCAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1307228 7 - 108792865 CATTCAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1152477 7 - 7082604 CATTCAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1245995 7 + 1864846 TATTCAG i cebCap1.NW_016107827v1 C 0 C 0 e otoGar3.GL873658 887631 77 + 5252280 I e dasNov3.JH576208 1562643 2873 + 4416731 I a score=1131492.000000 s hg38.chr2_KI270774v1_alt 6862 135 + 223625 TCACAAAACTTCACTTGCAGCAGGGGCAAGTCAGAATGAAGACTGCTCTCCAGAGGCAACCCTGGAG---TGTCAGCAGCTAACTCCCCCAAAGCCAGAGACACGGGAATATTTAGGGCCCTAGGAGCGAAAATCCAC s panTro5.chr2A 1285982 135 + 111504155 TCACAAAACTTCCCCTGCAGCAGGGGCAAGTCGGAATGAAGACTGCTCTCCAGAGGCAACCCTGGAG---TGTCAGCAGCTAACTCCCCCAAAGCCAGAGACACGGGAATATTTAGAGCCCTAGGAGGGAAAATCCAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1248065 135 + 114371477 TCACAAAACTTCCCCTGCAGCAGGGGCAAGTCGGAATGAAGACTGCTCTCCAGAGGCAACCCTGGAG---TGTCAGCAGCTAACTCCCCCAAAGCCAGAGACACGGGAATATTTAGAGCCCTAGGAGGGAAAATCCAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1273715 135 + 1464242 TCACAAAACTTCACTTGCAGCAGGGGCAAGTCGGAATGAAGACTGCTCTCCAGAGGCAACCCTGGAG---TGTCAGCAGCTAACTCCCCCAAAGCCAGAGACACGGGAATATTTAGGGCCCTAGGAGGGAAAATCCAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1004825 135 + 81552678 TCACAAAACTTCCCCTGCAGCAGGGGAAAGTCGGAATGAAGACTGCTCTCCAGAGGCAACCCTGGAG---TGTCAGCAGCTAACTCCCCCAAAGCCAGAGACACGGGAATATTTAGGGCCCTAGGAGGGAAAATCCAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1350108 135 + 108979918 TCACAAAATTCCCCCTGCAGCAGGGCCAAGTCGGAGTGAAGACGGTTCTCCCGAAGCAAACCTGGAG---TGTCAGCAGCTAACTCCCCCAAAGCCAGAGACATGGGAATATTTAGGGCCCTCGGAGGGAAAATCCAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1322291 135 - 111193037 TCACAAAATTCCCCCTGCAGCAGGGCCAAGTCGGAGTGAAGACGGTTCTCCCGAAGCAAACCTGGAG---TGTCAGCAGCTAACTCCCCCAAAGCCAGAGACATGGGAATATTTAGGGCCCTCGGAGGGAAAATCCAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1350407 135 + 3644372 TCACAAAATTCCCCCTGCAGCAGGGCCAAGTCGGAGTGAAGACGGTTCTCCCGAAGCAAACCTGGAG---TGTCAGCAGCTAACTCCCCCAAAGCCAGAGACATGGGAATATTTAGGGCCCTCGGAGGGAAAATCCAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1303876 135 - 10304083 TCACAAAATTCCCCCTGCAGCAGGGCCAAGTCGGAGTGAAGACAGTTCTCCCGAAGCAAACCTGGAG---TGTCAGCAGCTAACTCCCCCAAAGCCAGAGACATGGGAATATTTAGGGCCCTCGGAGGGAAAATCCAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1373182 135 - 107702431 TCACAAAATTCTCCCTGCAGCAGGATCAAGTCAGAGTGAAGACAGTTCTCCCGAAGCAAACCTGGAG---TGTCAGCAGCTAACTCCCCCAAAGCCAGAGACACGGGAATATTTAGGGCCCTCGGAGGGAAAATCCAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 853018 135 - 2200435 TCACAAAATTCCCCCTGCAGCAGGGCCAAGTCGGAGTGAAGACAGTTCTCCCGAAGCAAACCTGGAG---TGTCAGCAGCTAACTCCCCCAAAGCCAGAGACATGGGGATATTTAGGGCCCTCGGAGGGAAAATCCAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1291161 135 - 13651311 TCACAAAATTCCCCCTGCAGCAGGGGCAAGTCAGAATGAAGACGGTTCTCCAGAAGCAAACCTGGAG---TGTCAGCAGCTAACTCCCCCAAAGCCAGAGACACAGGAATATTTAGGGCCCTCGGAGGGAAAATCCAC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1307235 132 - 108792865 TCACAGAATTCCCCCTGCAGCAGGG-CAGGTCCGTTTGAAGACTG-TCTCCAGA-GCAAGCCTGGAA---AGTCAGAAGCTGACTCCTCTAGCGCCAGAGACACGGGAATATTTAGGGGCCTCGGAGGGAAAATCCAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1152484 132 - 7082604 TCACGGAACTCCCCCTGCAGCAGGG-CAGGTCGGTTTGAAGACCA-TCTCCAGA-GCAAGCCTGGAA---TGTCAGCAGCTGACTCCTCTAGAGCCAGAGACACAGGAATATTTAGGGGCCTAGGAGGGAAAATCTAC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1246002 132 + 1864846 TCACAGAGCTCCCCCTGCAGCAGGG-CAGGTCGGTTTGAAGACTG-TCTCCAGA-GCAAGCCTGGAA---TGTCAGCAGCTGACTCCTCTAGAGCCAGAGACATGGGAATATTTAGGGGCCTAGGAGGGAAAATCTAC i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 887708 124 + 5252280 TCACAGACGTCCCC--ACAGCAGGG-CAAGTCCGTGTGGAGAGATTGCCCCCAAAGAATACTTCAAAACTTCTCAGCAGCT-------CCAAGGTGGGAAGT---GGGAGATTTGGGGCCCAAGGAGTG-GGATCCAG i otoGar3.GL873658 I 77 C 0 e dasNov3.JH576208 1562643 2873 + 4416731 I a score=8190.000000 s hg38.chr2_KI270774v1_alt 6997 2 + 223625 AT s panTro5.chr2A 1286117 2 + 111504155 AT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1248200 2 + 114371477 AT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1273850 2 + 1464242 AT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1004960 2 + 81552678 AT i nomLeu3.chr19 C 0 C 0 s chlSab2.chr14 1373317 2 - 107702431 at i chlSab2.chr14 C 0 I 1639 s calJac3.chr14 1307367 2 - 108792865 AT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1152616 2 - 7082604 AT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1246134 2 + 1864846 AT i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 887832 2 + 5252280 AT i otoGar3.GL873658 C 0 C 0 e dasNov3.JH576208 1562643 2873 + 4416731 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=487748.000000 s hg38.chr2_KI270774v1_alt 6999 190 + 223625 CCCCAGAAACCAGGTCAGGTGCGTCCTGGGACTTCATTTCCTAGAGAGGAACTGAGGTTGAAAGGG-AATGGAGCTGGAGTTCCAATGCAGACCCCATAAC---------AC-TTTAACTGTTTAAACCTGAGTTGGCCCCAGGAGAAATAATAAAAATTAATATGGCCTCCTTAGATGGTTTTGAAGACATCTGGTACCA------ s panTro5.chr2A 1286119 190 + 111504155 CCCCAGAAACCGGGTCAGGTGCGTCCTGGGACCTCATTTCCTAGAGAGGAACTGAGGTTGAAAGGG-AATGGAGCTGGAGTTCCAATGCAGACCCCATAAC---------AC-TTTAACTGTTTAAACCTGAGTTGGCCCCAGGAGAAATAATAAAAATTAATATGGCCTCCTTAGATGGTTTTGAAGACATCTGGTACCA------ i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1248202 190 + 114371477 CCCCAGAAACTGGGTCAGGTGCGTCCTGGGACCTCATTTCCTAGAGAGGAACTGAGGTTGAAAGGG-AATGGAGCTGGAGTTCCAATGCAGACCCCATAAC---------AC-TTTAACTGTTTAAACCTGAGTTGGCCCCAGGAGAAATAATAAAAATTAATATGGCCTCCTTAGATGGTTTTGAAGACATCTGGTACCA------ i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1273852 190 + 1464242 CCCCAGAAACTGGGTCAGGAGCGTCCTGGGACCTCATTTCCTAGAGAGGAACTGAGGTTGAAAGGG-AATGGAGCTGGAGTTCCAATGCAGACCCCATAAC---------AC-TTTAACTGTTTAAACCTGAGTTGGCCCCAGGAGAAATAATAAAAATTAATATGGCCTCCTTAGATGGTTTTGAAGACATCTGGTACCA------ i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1004962 190 + 81552678 CCCCAGAAACAGGGTCAGGTGCGTCCTGGGACCTCATTTCCTAGAGAGGAACTGAGGTTGAAAGGG-AATGGAGCTGGAGTTCCAATGCAGACCCCATAAC---------AC-TTTAACTGTTTAAACCTGAGTTGGCCCCAGGAGAAATAATAAAAATTAATATGGCCTCCCTAGATGGTTTTGAAGACATCTGGTACCA------ i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1307369 187 - 108792865 CCCTAGAAACAGGGTCAGGTGCGTC--GGGACCTCATTTCCTAGAGAGGAACTGTGGTTGAGAAAG-AGTGGAGCCGGAGTTCCAATGCAGACCCCATCAC---------AC-TTTAACTGTTGAAACCTGAGTTGG-CCCAGGAGAAATTATAAAAATTAATATGGCCTCCCTGGATGGTTTTAAAGACATCTGGCACCA------ i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1152618 189 - 7082604 CCCCAGAAAGAGGGTTGGGTGCGTCCTGGGACCTCATTTCCTAGAGAGGAAGTGTGGTTGAGAAAG-AATGGAGCTGGAGTTCCAATGCAGACCCCATCAC---------AC-TTCAACTGTTTAAACCTGAGTTGG-CCCAGGAGAAATTATAAAAATTAATATGGCCTCCCTGGATGGTTTTGAAGACATCTGGTACCA------ i saiBol1.JH378218 C 0 I 1939 s cebCap1.NW_016107827v1 1246136 190 + 1864846 CCCCAGAAACAGGGTCAGGTGCATCCGAGGACCTCATTTCCTAGAGAGGAACCGTGGTTGAGAAAG-AATGGAGCTGGAGTTCCAATGCAGACCCCGTCAC---------ACTTTTAACTGTTTAAACCTGAGTTGG-CCCAGGAGAGATTATAAAAATTAATATGTCCACCCTGGATGGTTTTGAAGACATCTGGTACCA------ i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 887834 199 + 5252280 -CCCAG-AACAGGGTGAGGTGGCCCCATG---CTCATGTCCTGAGGAGGAGTCCAGGGTGACTGGGTAGTGTGGCTGGACTTACACGGCAGGCTCC-TCACTCTTCAGCTAT-TTCAGCTATTTAAACTTGACTTGGCCCCAGGAGAAATTATAACACTTCCTATGGATTCCC-AGATGGTTTTGAAGACACCTGGACTCAGCACCG i otoGar3.GL873658 C 0 C 0 e dasNov3.JH576208 1562643 2873 + 4416731 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=28427.000000 s hg38.chr2_KI270774v1_alt 7189 16 + 223625 GATTCAACTCCCTGAG s panTro5.chr2A 1286309 16 + 111504155 GATTCAACTCCCTGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1248392 16 + 114371477 GATTCAACTCCCTGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1274042 16 + 1464242 GATTCAACTCCCTGAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1005152 16 + 81552678 GATTCAACTCCGTGAG i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1307556 15 - 108792865 GATTCAGCT-CCTGAG i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1246326 16 + 1864846 GATTCGGCTCCCTGAg i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 888033 16 + 5252280 GGTGGCACTCGCTGAG i otoGar3.GL873658 C 0 C 0 e saiBol1.JH378218 1152807 1939 - 7082604 I e dasNov3.JH576208 1562643 2873 + 4416731 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=89878.000000 s hg38.chr2_KI270774v1_alt 7205 48 + 223625 TCTCTGACCACctctctctt------tgtctctgtctctatctctctcactctg s panTro5.chr2A 1286325 48 + 111504155 TCTCTGACCACctctctctt------tgtctctgtctctatctctctcactctg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1248408 48 + 114371477 TCTCTGACCACctctctctt------tgtctctgtctctatctctctcactctg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1274058 48 + 1464242 TCTCTGACCACctctctctt------tgtctctgtctctatctctctcactctg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1005168 48 + 81552678 TCTCTGACCACctctctctt------tgtctctgtctctatctctctcaccctg i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1307571 45 - 108792865 TCTCTGACTAGctctct---------tgtctctgtttctctctctcttcctctg i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1154746 52 - 7082604 tctcttactctgtctctctctccctctgtctctg--tctctctcgctcactctg i saiBol1.JH378218 I 1939 C 0 s cebCap1.NW_016107827v1 1246342 34 + 1864846 tctctgactagctctc----------tgtctctg----------tcttactctg i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 888049 46 + 5252280 GCCATGACCAtctctgtttc------tg--tgtgtctctgtctccctgtctctg i otoGar3.GL873658 C 0 C 0 e dasNov3.JH576208 1562643 2873 + 4416731 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=45402.000000 s hg38.chr2_KI270774v1_alt 7253 19 + 223625 tctctctctctctccccct s panTro5.chr2A 1286373 19 + 111504155 tctctctctctctccccct i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1248456 19 + 114371477 tctctctctctctccccct i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1274106 19 + 1464242 tctctctctctctcctcct i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1005216 17 + 81552678 --tctctctctctccccct i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1307616 15 - 108792865 ----tctctctctcCTCCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1154798 15 - 7082604 ----tctctctctcccACT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1246376 15 + 1864846 ----tctctctctcCCCTT i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 888095 19 + 5252280 tttctcacacggtccctct i otoGar3.GL873658 C 0 I 1 s dasNov3.JH576208 1565516 19 + 4416731 TCCCTGCCACTCTTCTCTT i dasNov3.JH576208 I 2873 C 0 e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=116132.000000 s hg38.chr2_KI270774v1_alt 7272 48 + 223625 -----cCTTCTACCCTTC-TGGTGCAGAGTCCTCAGAGGC-TCCTTTCCTACTGG s panTro5.chr2A 1286392 48 + 111504155 -----cCTTCTACCCTTC-TGGTGCAGAGTCCTCAGAGGC-TCCTTTCCTACTGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1248475 48 + 114371477 -----cCTTCTACCCTTC-TGGTGCAGAGTCCTCAGAGGC-TCCTTTCCTACTGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1274125 48 + 1464242 -----cCTTCTACCCTTC-TGGTGCAGAGTCCTCAGAGGC-TCCTTTCCTACTGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1005233 48 + 81552678 -----cCTTCTACCCTTC-TGGTGCAGAGTCCTCAGAGGC-TCCTTTCCTACTGG i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1307631 48 - 108792865 -----CCTCCTACCATTC-TGGTGCAGGGTCCTCAGAGGC-TCCTTTCCTGCTGG i calJac3.chr14 C 0 I 7 s saiBol1.JH378218 1154813 48 - 7082604 -----CCTTCTCTCCTTC-TGGTGCAGAGTCCTTGGAGGC-TCTTTCCCTACTGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1246391 49 + 1864846 -----CCTTCTAGCCTTCTTTGTGCAGAGTCCTCAGAGGC-TCCTTTCCTACTGG i cebCap1.NW_016107827v1 C 0 C 0 s dasNov3.JH576208 1565535 49 + 4416731 GGATTCCCTCTGT------GGATTTGGGGTGCATAACGGTGTCCTTTCCTACTGT i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 888114 1 + 5252280 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=824579.000000 s hg38.chr2_KI270774v1_alt 7320 440 + 223625 -------------------------GGTACCTGAGTAATCTGTGGTCTTGGAGGCTCCCCTCTACTGCTTGGGGTTGATACAAGGGAACCTATCGCTG-CCCAATGATTTGGGGGCACTTTGCACGTGGGAACCTGGGAAGGGCCCCTGCCACTGAACGTCAC-TGAGCAGGGATTGCTTTCATGAATATCCCACCCTCCACCTTTTGAAAGAGGGCTCAGAGGAAGGCCCAGATCCAAGCAGGAAGTGCCGCCGCTCAAGGCCATTTCATTCATAGGGCACATTCACTTTGTAAAACTCATGAGCCAACCC-CTTACTTTTCTCAATAACCCTGTAAATTAGACATGATCTACCCCAGGTCCA------CACATTTTAACAGATTCAGAAAATTTTGACCAAAAGAAACATTGTGCTGTGAGTCAGAGGCAGAGCCTACTT-AGCTCCAGGCATCTGCCTCCTTTCTTAAGAGT s panTro5.chr2A 1286440 440 + 111504155 -------------------------GGTACCTGGGTAATCTGTGGTCTTGGAGGCTCCCCCCTACTGCTTGGGGTTGATACAAGGGAACCTATCGCTG-CCCAATGATTTGGGGGCACTTTGCACGTGGGAACCTGGGAAGGGCCCCTGCCACTGAACGTCAC-TGAGCAGGGATTGCTTTCATGAATATCCCACCCTCCACCTTTTGAAAGGGGGCTCAGAGGAAGGCTCAGATCCAAGCAGGAAGTGCCGCCGCTCAAGGCCATTTCATTCATAGGGCACCTTCACTTTGTAAAACTCATGAGCCAACCC-CTTACTTTTCTCAATAACCCTGTAAATTAGACATGATCTACCCCAGCTACA------CACATTTTAACAGATCCAGAAAATTTTGACCAAAAGAAACATTGTGCTGTGAGTCAGAGGCAGAGCCTACTT-AGCTCCAGGCATCTGCCTCCTTTCTTAAGAGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1248523 440 + 114371477 -------------------------GGTACCTGGGTAATCTGTGGTCTTGGAGGCTCCCCCCTACTGCTTGGGGTTGATACAAGGGAACCTATCGCTG-CCCAATGATTTGGGGGCACTTTGCACGTGGGAACCTGGGAAGGGCCCCTGCCACTGAACGTCAC-TGAGCAGGGATTGCTTTCATGAATATCCCACCCTCCACCTTTTGAAAGGGGGCTCAGAGGAAGGCTCAGATCCAAGCAGGAAGTGCCGCCGCTCAAGGCCATTTCATTCATAGGGCACCTTCACTTTGTAAAACTCATGAGCCAACCC-CTTACTTTTCTCAATAACCCTGTAAATTAGACATGATCTACCCCAGCTACA------CACATTTTAACAGATCCAGAAAATTTTGACCAAAAGAAACATTGTGCTGTGAGTCAGAGGCAGAGCCTACTT-AGCTCCAGGCATCTGCCTCCTTTCTTAAGAGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1274173 437 + 1464242 -------------------------GGTACCTGGGTAATCTGTGGTCTTGGAGGCTCCCCACTACTGCTTGGGGTTGATACAA-GGAACCTATCGCTG-CCCAATGATTTGGGGGCATTTTGCACGTGGGAACCTGGGAAGGGCCCCTGCCACTGAACGTCAC-TGAGCAGGGATTGCTTTCATGAATATCCCACCCTCCACCTTTTGAAAGAGGGCTCAGAGGAAGGCTCAGATCCAAGCAGGAAGTGCCGCCGCTCAAGGCCATTTCATTCATAGGGCACATTCACTTTGTAAAACTCATGAGCCAA-CC-CTTACTTTTCTCAATAACCCTGTAAATTAGACATGATCTA-CCCAGGTCCA------CACATTTTAACAGATTCAGAAAATTTTGACCAAAAGAAACACTGTGCTATGAGTCAGAGGCAGAGCCTACTT-AGCTCCAGGCATCTGCCTCCTTTCTTAAGAGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1005281 439 + 81552678 -------------------------GATACCTGGGTGATCTGTGGTCTTGGAGGCTCCCCCCTACTGCTT--GGTTGATACAAGGGAACCTATCGCTGCCCCAATGATTTGGGGGCACTTTGCACGTGGGAACCTGGGAAGGACCCCTGCCACTGAACGTCAC-TGAGCAGGGACTGCTTTCATGAATATCCCACCCTCCACCTTTTGAAAGAGGGCTCAGAGGAAGGCTCAGATCCAAGCAGGAAGTGCTGCCGCTCAAGGCCATTTCATTCATAGGGCACATTCGCTTTGTAAAACTCATGAGCCAACCC-CTTACTTTTCTCAATAACCCTGTAAATTAGGCATGATCTACCCCAGGTCCA------CACATTTTAACAGATTCAGAAAATTTTGACCAAAAGAAACACTGTGCTGTGAGTCAGAGGCAGAGCCTACTT-AGCTCCAGGCATCTGCCTCCTTTCTTAAGAGT i nomLeu3.chr19 C 0 C 0 s saiBol1.JH378218 1154861 434 - 7082604 -------------------------AATACCTGGGTAATCTGTGGTCTTGGAGGCTCCCCGCTACTACCTGGGGTTGACACAAGGGAAGCCATCACTG-CCCAGTGATTTTGGAGCACTTTGCGTGT-GGAAGCCGGGAAGGGTCCCTTCCGCCGAACATCAC-TGAGCAGGGGTTGCTTTCATGAATATCCCTCCCTCCACCTTCCTAGAGAGGGCTCAGACAGAGGCTCAGAGCCAAACAGGAAGTGCCACCACTCAAGGccatttcatttatagggcacgttcactttgtaaaactcatgagccaaccc-attacttttctcaataactctgtcaattagacatgatctatgccatgtcca------cacattttaacaaattcag-aaacttgggccaaaagaagCATTATGCTGTA----AGAGGAAGAGCCCATTT-AGCTCCAGGTATCTGCCTCCTTTTTTAAGAGT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1246440 434 + 1864846 -------------------------GGTACCTGGGTAATCTGTGGTCTTGGAGGCTTCCCGCTACTACCTGGGGTTGACACAAGGGAACCCATCACTG-CCCAGTGATTTTGGAGCACTTTGCATGT-GGAAGCTGGGAAGGGTCCCTGCCACTGAACATCAC-TAAGCAGGGGTTGCTTTCATGAATATCCCTCCCTCCACCTTCCTAGAGAGGGCTCAGAGGGAGGCTCAGAGCCAAACAGGAAGTGCCGCCACTCAAGGCCATTTCATTTATAGAGCACATTCACTTTGTAAAACTcatgagccaaccc-attacttttctcaataatcctgtaaattagacatgatctatgccatgtcca------cacattttaacaaattcag-aaactttggccaaaagaagcattgcgctgta----agaggaagagcccagtt-agctccaggcatctgcctccTTTTTTAAGAGT i cebCap1.NW_016107827v1 C 0 I 311 s dasNov3.JH576208 1565584 447 + 4416731 GATTCCCAAGCAGTCTGTGATATTTGAAATCTGGGCAGTCTGTGATTTTTGTGGCTCCTCCCATCT---TGGCATTGATAAAAAGGAACCCAGCCCTG-CCCAATGAGCTTGTAGCACCTTGTAC--------CTCAGGAGAGTCCCATCTCCTGAATATCTCATTAATAGGGATTGTTCTCATTAACATATAG-----TATGGGTTGAGAGAGGGCTCCCAGTAAAGCACAGATCCACCCAAGAACTATCACTGTTCATGATCACTTCACCCATAAAGTATTTTTACATTATAAAACCCAGGATCCAGctcacttaattttttcaataaccctgtcatttagctatcatctacctaaagcccataccttcacattttaggaagtttgg-aagctaaggctcaaagaaattttgtagagttagtaagagaaagaaccaggTTAAGCCTTGAGTTTTTGCTTCCAT---------- i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 888114 1 + 5252280 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=2262.000000 s hg38.chr2_KI270774v1_alt 7760 3 + 223625 TGA s panTro5.chr2A 1286880 3 + 111504155 CGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1248963 3 + 114371477 CGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1274610 3 + 1464242 TGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1005720 3 + 81552678 GGA i nomLeu3.chr19 C 0 C 0 s saiBol1.JH378218 1155295 3 - 7082604 GGA i saiBol1.JH378218 C 0 I 1998 s dasNov3.JH576208 1566031 1 + 4416731 --A i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1246874 311 + 1864846 I e otoGar3.GL873658 888114 1 + 5252280 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=7985.000000 s hg38.chr2_KI270774v1_alt 7763 6 + 223625 CCTAAG s panTro5.chr2A 1286883 6 + 111504155 CCTAAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1248966 6 + 114371477 CCTAAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1274613 6 + 1464242 CCTAAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1005723 6 + 81552678 CCTAAG i nomLeu3.chr19 C 0 C 0 s dasNov3.JH576208 1566032 6 + 4416731 CCCAAG i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1155298 1998 - 7082604 I e cebCap1.NW_016107827v1 1246874 311 + 1864846 I e otoGar3.GL873658 888114 1 + 5252280 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=324445.000000 s hg38.chr2_KI270774v1_alt 7769 256 + 223625 GAGAGGTAGGAAGTGGA-AAG---GAGGTGGGTAGGGTCTGTCTCTCTGATCAGAATCTTTTTCATAGAGGAAAACACTTGGATTTCCAAGGACAGCTT--CTGGTCAGCTTGGAGCTCAGTGGCTTTTATTGCAACAAGAAGTAGCAGAAGTGAAGCCCTGACCACAGCTGTTTCATC--------ATGAAAGTGGGTGGAAACACCAATAAAACTCTGAAGGACACATGGCTGAGA-CCCCCAGTAGGCTGGGACATGGCTAACAGTCA s panTro5.chr2A 1286889 256 + 111504155 GAGAGGTAGGAAGTGGA-AAG---GAGGTGGTTAGGGTTTGTCTCTCTGATCAGAATCTCTTTCATAGAGGAAAACACTTGGATTTCCAAGGACAGCTT--CTGGTCAGCTTGGAGCTCAGTGGCTTTTATTGCAACAAGAAGTAGCAGAAGTGAAGCCCTGACCACAGCTGTTTCATC--------ATGAAAGTGGGTGGAAACACCAATAAAACTCTGAAGGACATATGGCCGAGA-CCCCCAGTAGGCTGGGACATGGCTAACAGTCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1248972 256 + 114371477 GAGAGGTAGGAAGTGGA-AAG---GAGGTGGTTAGGGTTTGTCTCTCTGATCAGAATCTCTTTCATAGAGGAAAACACTTGGATTTCCAAGGACAGCTT--CTGGTCAGCTTGGAGCTCAGTGGCTTTTATTGCAACAAGAAGTAGCAGAAGTGAAGCCCTGACCACAGCTGTTTCATC--------ATGAAAGTGGGTGGAAACACCAATAAAACTCTGAAGGACATATGGCCGAGA-CCCCCAGTAGGCTGGGACATGGCTAACAGTCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1274619 255 + 1464242 GAGAGGTAGGAAGTAGA-AAG---GAGGTGGGTAGGGTCTGTCTCTCTGATCAGAATCTCTTTCATAGAGGAAAACACTTGGATTTCCAAGGACAGCCT--CTGGTCGGCTTGGAGCTCAGTGGCTTTTATTGCAACAACAAGTAGCAGAAGTGAAGCCCTGACCACAGCTGTTTCATC--------ATGAAAGTGGGTGGAAACACCAATAAAACTCTGAAGGACACGTGGCTGAGA--CCCCAGTAGGCTGGGACATGGCTCACAGTCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1005729 247 + 81552678 GAGAGGTAGGAAGCGGA-AAG---GAGGTGGGCAG---------CGCTGATCAGAATCTCTTTCATAGAGGAAAACACTTGGATTTCCAAGGACAGCCT--CTAGTCGGCTTGGAGCTCAGTGGCTTTTAGTGCAACAAGAAGTAGCAGAAGTGAAGCCCTGACCACAGCTGTCTCATC--------ATGAAAATGGGTGGAAACACCAATAAAACTCTGAAGGACACATGCCTGAGA-CCCCCCATAGGCTGGGACATGGCTAACGGTCA i nomLeu3.chr19 C 0 C 0 s cebCap1.NW_016107827v1 1247185 246 + 1864846 GAGAGGTAGGAAATGGGCAAG---GACGTAGGCAAGGTTTGTCTCTCTGATCAGAATCTCTTTCCT-GGGGAAAACACTCGTATTTCCAAGGGCGGC------------CTTGGAGCTCAGTGGC-TTTGTTTTAACAGGAGGTAGCAAAAGTGAAGCTGTGACCACAGCTGTTTCATC--------ATGAATGTGGATGGAAACACCAATAAAACTCTGTAGGACATGTGGCTGAGACCCCCCAGTAGTCTGGGACATGGCTAACAGTCA i cebCap1.NW_016107827v1 I 311 C 0 s dasNov3.JH576208 1566038 251 + 4416731 -GCGGGTTGGAAACGGG-AGGTGCAGAATGGGTGAGGTTAGCCATTCTGGTGGGAAATTCATCAGTGGAGGAGAA------------CAACAACTGCATAGCTGCTTTATTTGGAGTGAAGT----TCAGCTGAAACAGGAAGTA-TAGAAGTAAAGGCATATCCTCAGCTTCTGCTTCTGTCACTAATGGAAACAGGTAAAAAGAGCAATAAAACTTTTATATACACATTGCTAAAA-Ccagtagtaggctggcaagtatttaacagcca i dasNov3.JH576208 C 0 I 721 e saiBol1.JH378218 1155298 1998 - 7082604 I e otoGar3.GL873658 888114 1 + 5252280 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=375.000000 s hg38.chr2_KI270774v1_alt 8025 1 + 223625 C s panTro5.chr2A 1287145 1 + 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1249228 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1274874 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1005976 1 + 81552678 C i nomLeu3.chr19 C 0 I 20 s cebCap1.NW_016107827v1 1247431 1 + 1864846 G i cebCap1.NW_016107827v1 C 0 C 0 e saiBol1.JH378218 1155298 1998 - 7082604 I e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=11500.000000 s hg38.chr2_KI270774v1_alt 8026 31 + 223625 ATGGTTGAGACCCCCCA----TAGGCTGGGACATG s panTro5.chr2A 1287146 32 + 111504155 ATGGCTGAGACCCCCCA---GTAGACTGGGACAAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1249229 17 + 114371477 ATGGCTGAGACCCCCCA------------------ i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1274875 31 + 1464242 ATGCCTGAGACCCCCAG----TAGGCTGGGACATG i gorGor5.CYUI01015607v1 C 0 T 63 s cebCap1.NW_016107827v1 1247432 33 + 1864846 --GCCTGAGACCCCCCCCCACTAGCCTGGGACACA i cebCap1.NW_016107827v1 C 0 C 0 e saiBol1.JH378218 1155298 1998 - 7082604 I e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C e nomLeu3.chr19 1005977 20 + 81552678 I a score=4659.000000 s hg38.chr2_KI270774v1_alt 8057 24 + 223625 GCTCACAGTCACATGCCTGAGACC- s panTro5.chr2A 1287178 24 + 111504155 ACTAACAGTCACATGGCTAAGACC- i panTro5.chr2A C 0 C 0 s cebCap1.NW_016107827v1 1247465 25 + 1864846 GCTAACAGTCACATGGCTGAGACCC i cebCap1.NW_016107827v1 C 0 C 0 e saiBol1.JH378218 1155298 1998 - 7082604 I e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C e nomLeu3.chr19 1005977 20 + 81552678 I e gorGor5.CYUI01015607v1 1274906 63 + 1464242 T e panPan2.chr2A 1249246 0 + 114371477 C a score=15377.000000 s hg38.chr2_KI270774v1_alt 8081 24 + 223625 CCCCAGTAGACTAGGACAAGACTA s panTro5.chr2A 1287202 24 + 111504155 CCCCAGTAGACTGGGACAAGACTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1249246 19 + 114371477 -----GTAGACTGGGACAAGACTA i panPan2.chr2A C 0 T 19 s gorGor5.CYUI01015607v1 1274843 24 + 1464242 CCCCAGTAGGCTGGGACATGGCTC i gorGor5.CYUI01015607v1 T 63 C 0 s cebCap1.NW_016107827v1 1247490 24 + 1864846 CCCCACTAGGCTGGGACACGGCTA i cebCap1.NW_016107827v1 C 0 C 0 e saiBol1.JH378218 1155298 1998 - 7082604 I e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C e nomLeu3.chr19 1005977 20 + 81552678 I a score=10221.000000 s hg38.chr2_KI270774v1_alt 8105 20 + 223625 ACAGTCACATGGCTGAGACC s panTro5.chr2A 1287226 20 + 111504155 ACAGTCACATGCCTGAGACT i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1274867 20 + 1464242 ACAGTCACATGCCTGAGACC i gorGor5.CYUI01015607v1 C 0 C 0 s cebCap1.NW_016107827v1 1247514 20 + 1864846 ACAGTCACATGGCTGAGACC i cebCap1.NW_016107827v1 C 0 C 0 e saiBol1.JH378218 1155298 1998 - 7082604 I e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C e nomLeu3.chr19 1005977 20 + 81552678 I e panPan2.chr2A 1249265 19 + 114371477 T a score=850.000000 s hg38.chr2_KI270774v1_alt 8125 4 + 223625 -CCCT s panTro5.chr2A 1287246 4 + 111504155 -CCCT i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1274887 4 + 1464242 -CCCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1005997 4 + 81552678 -CCCA i nomLeu3.chr19 I 20 C 0 s cebCap1.NW_016107827v1 1247534 4 + 1864846 CCCC- i cebCap1.NW_016107827v1 C 0 I 2 e saiBol1.JH378218 1155298 1998 - 7082604 I e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C e panPan2.chr2A 1249265 19 + 114371477 T a score=38051.000000 s hg38.chr2_KI270774v1_alt 8129 39 + 223625 GTAGGCTGGGACATGGGTAACAGTCACATGGCTAAGACC- s panTro5.chr2A 1287250 39 + 111504155 GTAGGCTGGGACATGGGTAACAGTCACATGGCTAAGACC- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1249246 39 + 114371477 GTAGACTGGGACAAGACTAACAGTCACATGGCTAAGACC- i panPan2.chr2A T 19 C 0 s gorGor5.CYUI01015607v1 1274891 39 + 1464242 GTAGGCTGGGACATGGGTAACAGTCACATAGCTGAGACT- i gorGor5.CYUI01015607v1 C 0 T 87 s nomLeu3.chr19 1006001 39 + 81552678 GTAATGTGGGACATGGGTAACAGTCATATTGCTGAGACC- i nomLeu3.chr19 C 0 I 7 s cebCap1.NW_016107827v1 1247540 40 + 1864846 CTAGGCTGGGACACGGCTAAGAGTCACGTGACTGAGACGC i cebCap1.NW_016107827v1 I 2 C 0 e saiBol1.JH378218 1155298 1998 - 7082604 I e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=51817.000000 s hg38.chr2_KI270774v1_alt 8168 65 + 223625 CCCCGGTAGACTGGGACAAGACTAACAGTCACATGGCTGAGACCCCCT-------------------------------------------GTAGGCTGGGACATGGG s panTro5.chr2A 1287289 108 + 111504155 CCCCAGTAGACTAGGACAAGACTAACAGTCACATGCCTGAGACCCCCCAGTAGACTAGGACAAGACTAACAGTCACATGGCTGAGACCCCCGTAGGCTGGGACATGGG i panTro5.chr2A C 0 I 301 s panPan2.chr2A 1249285 66 + 114371477 CCCCAGTAGACTGGGACATAGGTAACAGTCACATAGCTGAGACTCCCC------------------------------------------CGTAGGCTGGTACATGGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1274843 65 + 1464242 CCCCAGTAGGCTGGGACATGGCTCACAGTCACATGCCTGAGACCCCCA-------------------------------------------GTAGGCTGGGACATGGG i gorGor5.CYUI01015607v1 T 87 C 0 s nomLeu3.chr19 1006047 65 + 81552678 CCCAGGTAGTCAGGGACGTGGCTGACAGTCACATGGCTGAGGGTCCCA-------------------------------------------GTAGGCTGAGAGTTGGC i nomLeu3.chr19 I 7 C 0 s cebCap1.NW_016107827v1 1247580 67 + 1864846 CCTCACTAGGCTGGGACACGGCTAACAGTCACATCGCTGAGACCCCCC-----------------------------------------CACTAGGCTGGGACACAGC i cebCap1.NW_016107827v1 C 0 C 0 e saiBol1.JH378218 1155298 1998 - 7082604 I e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=4470.000000 s hg38.chr2_KI270774v1_alt 8233 4 + 223625 TAAC s panTro5.chr2A 1287698 4 + 111504155 TAAC i panTro5.chr2A I 301 C 0 s panPan2.chr2A 1249351 4 + 114371477 TAAC i panPan2.chr2A C 0 T 132 s gorGor5.CYUI01015607v1 1274908 4 + 1464242 TAAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1006112 4 + 81552678 TAAC i nomLeu3.chr19 C 0 C 0 s cebCap1.NW_016107827v1 1247647 4 + 1864846 TAAG i cebCap1.NW_016107827v1 C 0 C 0 e saiBol1.JH378218 1155298 1998 - 7082604 I e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=26573.000000 s hg38.chr2_KI270774v1_alt 8237 26 + 223625 AGTCACATGGCTAAGACCCCC-CAGTA s panTro5.chr2A 1287702 26 + 111504155 AGTCACATGGCTAAGACCCCC-CAGTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1249223 26 + 114371477 AGTCACATGGCTGAGACCCCC-CAGTA i panPan2.chr2A T 132 C 0 s gorGor5.CYUI01015607v1 1274912 26 + 1464242 AGTCACATAGCTGAGACTCCC-CCATA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1006116 26 + 81552678 AGTCACATGGCGGAGAATCCC-CAGTA i nomLeu3.chr19 C 0 T 191 s cebCap1.NW_016107827v1 1247651 27 + 1864846 AGTCACGTGACTGAGACCCCCACACTA i cebCap1.NW_016107827v1 C 0 C 0 e saiBol1.JH378218 1155298 1998 - 7082604 I e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=11435.000000 s hg38.chr2_KI270774v1_alt 8263 19 + 223625 GACTGGGACAAGACTAACA s panTro5.chr2A 1287728 19 + 111504155 GACTGGGACAAGACTAACA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1249249 19 + 114371477 GACTGGGACAAGACTAACA i panPan2.chr2A C 0 I 87 s gorGor5.CYUI01015607v1 1274938 18 + 1464242 GGCTGGTACATGGGTAAC- i gorGor5.CYUI01015607v1 C 0 C 0 s cebCap1.NW_016107827v1 1247678 19 + 1864846 GGCTGGGACACGGCTAACA i cebCap1.NW_016107827v1 C 0 C 0 e saiBol1.JH378218 1155298 1998 - 7082604 I e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C e nomLeu3.chr19 1006142 191 + 81552678 T a score=15640.000000 s hg38.chr2_KI270774v1_alt 8282 19 + 223625 GTCACATGGCTGAGACCCC s panTro5.chr2A 1287747 19 + 111504155 GTCACATGGCTAAGACCCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1249355 19 + 114371477 GTCACATGGCTGACACCCC i panPan2.chr2A I 87 C 0 s gorGor5.CYUI01015607v1 1274956 19 + 1464242 GTCACATGGCTGACACCCC i gorGor5.CYUI01015607v1 C 0 C 0 s cebCap1.NW_016107827v1 1247697 19 + 1864846 GTCACAAGGCTGAGACCCC i cebCap1.NW_016107827v1 C 0 C 0 e saiBol1.JH378218 1155298 1998 - 7082604 I e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C e nomLeu3.chr19 1006142 191 + 81552678 T a score=1326.000000 s hg38.chr2_KI270774v1_alt 8301 3 + 223625 CTA s panTro5.chr2A 1287766 3 + 111504155 CCA i panTro5.chr2A C 0 I 129 s panPan2.chr2A 1249374 3 + 114371477 CTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1274975 3 + 1464242 CTA i gorGor5.CYUI01015607v1 C 0 C 0 e saiBol1.JH378218 1155298 1998 - 7082604 I e cebCap1.NW_016107827v1 1247716 0 + 1864846 C e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C e nomLeu3.chr19 1006142 191 + 81552678 T a score=600.000000 s hg38.chr2_KI270774v1_alt 8304 1 + 223625 G s panTro5.chr2A 1287898 1 + 111504155 G i panTro5.chr2A I 129 C 0 s panPan2.chr2A 1249377 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1274978 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 e saiBol1.JH378218 1155298 1998 - 7082604 I e cebCap1.NW_016107827v1 1247716 0 + 1864846 C e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C e nomLeu3.chr19 1006142 191 + 81552678 T a score=75312.000000 s hg38.chr2_KI270774v1_alt 8305 125 + 223625 TAGGCTGGAACATGGCTAACAGTCACATGGCTGAGACCTCCCCCCACCCAGTAGTGTGGGACATGGCTAACAGTCACATGGCTGAGACCCCCT-------AGTAGGCTGGGACATGGCTAACAGTCACATGG s panTro5.chr2A 1287899 118 + 111504155 TAGGCTGGGACATGGGTAACAGTCACATGGTTGAGACC--CCCCCA-----TAGGCTGGGACATGGCTCACAGTCATATGCCTGAGACCCCCC-------AGTAGACTAGGACAAGACTAACAGTCACATGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1249378 117 + 114371477 TAGGCTGGGACATGGGTAACAGTCACATGCCTGAGACC--CCCCAG-----TAGTCTGGGACATGGCTAACAGTCACATGGCTGAGGGTCCC--------AGTAGGCTGAGAGTTGGCTAACAGTCACATGG i panPan2.chr2A C 0 T 87 s gorGor5.CYUI01015607v1 1274979 117 + 1464242 TAGGCTGGGACATGGGTAACAATCACATGCCTGAGACC--CCCCAG-----TAGTCTGGGACATGGCTAACAGTCACATGGCTGAGGGTCCC--------AGTAGGCTGAGAGTTGGCTAACAGTCACATGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1005951 132 + 81552678 TAGGCTGGGACATGGCTAACGGTCACATTGCTGAGACCTCCCGCCACCCAGTAATGTGGGACATGGGTAACAGTCATATTGCTGAGACCTCCCCCACCCAGGTAGTCAGGGACGTGGCTGACAGTCACATGG i nomLeu3.chr19 T 191 C 0 e saiBol1.JH378218 1155298 1998 - 7082604 I e cebCap1.NW_016107827v1 1247716 0 + 1864846 C e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=3898.000000 s hg38.chr2_KI270774v1_alt 8430 6 + 223625 CTGAGA s panTro5.chr2A 1288017 6 + 111504155 CTAAGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1249408 6 + 114371477 CTGAGA i panPan2.chr2A T 87 C 0 s gorGor5.CYUI01015607v1 1275096 6 + 1464242 CGGAGA i gorGor5.CYUI01015607v1 C 0 T 196 s nomLeu3.chr19 1006083 6 + 81552678 CTGAGG i nomLeu3.chr19 C 0 C 0 e saiBol1.JH378218 1155298 1998 - 7082604 I e cebCap1.NW_016107827v1 1247716 0 + 1864846 C e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=13108.000000 s hg38.chr2_KI270774v1_alt 8436 36 + 223625 TGCCCCCCAGTAGTCTGGGACATGGCTAACAGTCAT s panTro5.chr2A 1288023 34 + 111504155 --CCCCCCAGTAGACTGGGACAAGACTAACAGTCAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1249414 34 + 114371477 --CCCCCCAGTAGTCTGGGACATGGCTAACAGTCAC i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1006089 33 + 81552678 ---GTCCCAGTAGGCTGAGAGTTGGCTAACAGTCAC i nomLeu3.chr19 C 0 T 145 e saiBol1.JH378218 1155298 1998 - 7082604 I e cebCap1.NW_016107827v1 1247716 0 + 1864846 C e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C e gorGor5.CYUI01015607v1 1275102 196 + 1464242 T a score=3644.000000 s hg38.chr2_KI270774v1_alt 8472 9 + 223625 ATTGCTGAG s panTro5.chr2A 1288057 9 + 111504155 ATGCCTGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1249448 9 + 114371477 ATGGCTGAG i panPan2.chr2A C 0 T 192 s nomLeu3.chr19 1005977 9 + 81552678 ATTGCTGAG i nomLeu3.chr19 T 145 C 0 e saiBol1.JH378218 1155298 1998 - 7082604 I e cebCap1.NW_016107827v1 1247716 0 + 1864846 C e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C e gorGor5.CYUI01015607v1 1275102 196 + 1464242 T a score=10574.000000 s hg38.chr2_KI270774v1_alt 8481 61 + 223625 ACCTCCCGCCACCCAGTAATGTGGGACATGGGTAACAGTCACATTGCTGAGACCTCCCCAG s panTro5.chr2A 1288066 52 + 111504155 ACC--------CCCTGTAGGCTGGGACATGGGTAACAGTCACATGGCTAAGACC-CCCCAG i panTro5.chr2A C 0 I 87 s nomLeu3.chr19 1005986 61 + 81552678 ACCTCCCGCCACCCAGTAATGTGGGACATGGGTAACAGTCATATTGCTGAGACCTCCCCCA i nomLeu3.chr19 C 0 C 0 e saiBol1.JH378218 1155298 1998 - 7082604 I e cebCap1.NW_016107827v1 1247716 0 + 1864846 C e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C e gorGor5.CYUI01015607v1 1275102 196 + 1464242 T e panPan2.chr2A 1249457 192 + 114371477 T a score=491.000000 s hg38.chr2_KI270774v1_alt 8542 5 + 223625 CCCAG s nomLeu3.chr19 1006047 5 + 81552678 CCCAG i nomLeu3.chr19 C 0 I 1 e saiBol1.JH378218 1155298 1998 - 7082604 I e cebCap1.NW_016107827v1 1247716 0 + 1864846 C e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C e gorGor5.CYUI01015607v1 1275102 196 + 1464242 T e panPan2.chr2A 1249457 192 + 114371477 T e panTro5.chr2A 1288118 87 + 111504155 I a score=0.000000 s hg38.chr2_KI270774v1_alt 8547 2 + 223625 GT e saiBol1.JH378218 1155298 1998 - 7082604 I e cebCap1.NW_016107827v1 1247716 0 + 1864846 C e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C e nomLeu3.chr19 1006052 1 + 81552678 I e gorGor5.CYUI01015607v1 1275102 196 + 1464242 T e panPan2.chr2A 1249457 192 + 114371477 T e panTro5.chr2A 1288118 87 + 111504155 I a score=2608.000000 s hg38.chr2_KI270774v1_alt 8549 18 + 223625 TAGTCAGGGACATGGCTG s panTro5.chr2A 1288205 18 + 111504155 TAGACTAGGACAAAACTA i panTro5.chr2A I 87 C 0 s nomLeu3.chr19 1006053 18 + 81552678 TAGTCAGGGACGTGGCTG i nomLeu3.chr19 I 1 C 0 e saiBol1.JH378218 1155298 1998 - 7082604 I e cebCap1.NW_016107827v1 1247716 0 + 1864846 C e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C e gorGor5.CYUI01015607v1 1275102 196 + 1464242 T e panPan2.chr2A 1249457 192 + 114371477 T a score=15150.000000 s hg38.chr2_KI270774v1_alt 8567 40 + 223625 ACAGTCACATGGCTAAGACCCCCCAGTAGGCTGGTACATA s panTro5.chr2A 1288223 40 + 111504155 ACAGTCACATGCCTGAGACCCCCCAGTAGGCTGGTGCATA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1249265 40 + 114371477 ACAGTCACATGGCTAAGACCCCCCAGTAGACTGGGACATA i panPan2.chr2A T 192 C 0 s nomLeu3.chr19 1006071 39 + 81552678 ACAGTCACATGGCTGAGG-GTCCCAGTAGGCTGAGAGTTG i nomLeu3.chr19 C 0 C 0 e saiBol1.JH378218 1155298 1998 - 7082604 I e cebCap1.NW_016107827v1 1247716 0 + 1864846 C e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C e gorGor5.CYUI01015607v1 1275102 196 + 1464242 T a score=29125.000000 s hg38.chr2_KI270774v1_alt 8607 37 + 223625 GGTAACAGTCACATAGCTGAGACTCCCCCATA-GGCTG s panTro5.chr2A 1288263 37 + 111504155 GGTAACAGTCACATAGCTGAGACTCCCCCGTA-GGCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1249305 37 + 114371477 GGTAACAGTCACATAGCTGAGACTCCCCCGTA-GGCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1274906 37 + 1464242 GGTAACAGTCACATAGCTGAGACTCCCCCATA-GGCTG i gorGor5.CYUI01015607v1 T 196 C 0 s nomLeu3.chr19 1006110 38 + 81552678 GCTAACAGTCACATGGCGGAGAATCCCCAGTATGGCTG i nomLeu3.chr19 C 0 T 96 e saiBol1.JH378218 1155298 1998 - 7082604 I e cebCap1.NW_016107827v1 1247716 0 + 1864846 C e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=44385.000000 s hg38.chr2_KI270774v1_alt 8644 79 + 223625 GTACATGGGTAATGTCACATGGCTGACACCCCCTAGTAGGCTGGGACATGGGTAACAGTCACATGCCTGAGACCCCCCA s panTro5.chr2A 1288300 79 + 111504155 GTACATGGGTAACATCACATGGCTGACACCCCCTAGTAGGCTGGGACATGGGTAACAGTCACATGCCTGAGACCCCCCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1249342 79 + 114371477 GTACATGGGTAACGTCACATGGCTGACACCCCCTAGTAGGCTGGGACATGGGTAACAGTCACATGCCTGAGACCCCCCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1274943 79 + 1464242 GTACATGGGTAACGTCACATGGCTGACACCCCCTAGTAGGCTGGGACATGGGTAACAATCACATGCCTGAGACCCCCCA i gorGor5.CYUI01015607v1 C 0 C 0 e saiBol1.JH378218 1155298 1998 - 7082604 I e cebCap1.NW_016107827v1 1247716 0 + 1864846 C e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C e nomLeu3.chr19 1006148 96 + 81552678 T a score=73494.000000 s hg38.chr2_KI270774v1_alt 8723 79 + 223625 GTAGTCTGGGACATGGCTAACAGTCACATGGCTGAGGGTCCCAGTAGGCTGAGAGTTGGCTAACAGTCACATGGCGGAG s panTro5.chr2A 1288379 79 + 111504155 GTAGTCTGGGACATGGCTAACAGTCACATGGCTGAGGGTCCCAGTAGGCTGAGAGTTGGCTAACAGTCACATGGCGGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1249421 79 + 114371477 GTAGTCTGGGACATGGCTAACAGTCACATGGCTGAGGGTCCCAGTAGGCTGAGAGTTGGCTAACAGTCACATGGTGGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1275022 79 + 1464242 GTAGTCTGGGACATGGCTAACAGTCACATGGCTGAGGGTCCCAGTAGGCTGAGAGTTGGCTAACAGTCACATGGCGGAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1006052 79 + 81552678 GTAGTCAGGGACGTGGCTGACAGTCACATGGCTGAGGGTCCCAGTAGGCTGAGAGTTGGCTAACAGTCACATGGCGGAG i nomLeu3.chr19 T 96 C 0 e saiBol1.JH378218 1155298 1998 - 7082604 I e cebCap1.NW_016107827v1 1247716 0 + 1864846 C e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=5367.000000 s hg38.chr2_KI270774v1_alt 8802 6 + 223625 ACTCCC s panTro5.chr2A 1288458 6 + 111504155 ACTTCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1249500 6 + 114371477 ACTCCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1275101 6 + 1464242 ACTCCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1006131 6 + 81552678 AATCCC i nomLeu3.chr19 C 0 C 0 s saiBol1.JH378218 1157296 6 - 7082604 ACTGTC i saiBol1.JH378218 I 1998 C 0 e cebCap1.NW_016107827v1 1247716 0 + 1864846 C e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=71334.000000 s hg38.chr2_KI270774v1_alt 8808 49 + 223625 CAGTATGGCTGAGTTGGGATGGTGTT---------------------------------------AGCGCCCAGTAGCTGAGTTGGGA s panTro5.chr2A 1288464 49 + 111504155 CAGTATGGCTGAGTTGGGATGGTGTT---------------------------------------AGCGCCCAGTAGCTGAGTTGGGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1249506 49 + 114371477 CAGTATGGCTGAGTTGGGATGGTGTT---------------------------------------AGCACCCAGTAGCTGAGTTGGGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1275107 49 + 1464242 CAGTATGGCTGAGTTGGGATGGTGTT---------------------------------------AGCGCCCAGTAGCTGAGTTGGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1006137 49 + 81552678 CAGTATGGCTGAGTTGGGAAGGTGTT---------------------------------------AGTGCCCAGTAGCTGagttggga i nomLeu3.chr19 C 0 C 0 s saiBol1.JH378218 1157302 77 - 7082604 CAGTA--GCTGAGTTGGGATGGTGTT---ACCATCCA------GTAGCTGAGTTTGGATGGTGGTTGTGCCCAGTAGCTGagttggta i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1247716 88 + 1864846 CAGTATGGCTGAATTGGGATGGTGTTTGCACCAACTATCTGGTGTATCTGATTTGGGATGATGTTGGTGCCCAGTAGCTGAGTTGGGA i cebCap1.NW_016107827v1 C 0 I 2308 e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=1683770.000000 s hg38.chr2_KI270774v1_alt 8857 1367 + 223625 CAGTGTTGCAGAGTGGcagaaatgagccttcagtcaagtctctgattttcatagctgctgttgcttattgaatcatctctagtctttggaatgccacagtttaagttttctcagaagtaaaacaataagacatgcataacattgataatttgaagagtagaaatatagtgcatataaggattttaataaagaagaaaattttcaagccagaatgaaaaaaagagaacctattctattaggaagtcaactaaaaacttcatg-aataaaattaaatttaggttcttctttagagacttcttggagccaggaaataattcagaattcagcctaagttgtaagcaaa-taataaaaattcaaaaacaatggtcagcgctagaatctaataacaggtgtgcagttggaacataaattttctctctccagtcccccagttttaccaaagataaatcatagtaggcccaatttatttttaaaataagttttagttttattatgttaggcctggttatttgcataaagtgcagcaataataatgactggccacatgggttccttctacgttggttttgccagaatattttcttagggaatttcagattagactctttaaagactcttgaggctgggaagccaagccaagtattgaccatcagactgtgctggtagta-tctgtatgaattgggtgaattccttccttttcaagttcccaaaatatctttaggttcctaggcctgtctgaaagtgatgtt--ctgtgcttgccgcaaggtcaggaatcttgtaagggaaccttgtaagcaagtgaccatgccagtctttccaaggtactatttactggccctataaagtcaacgtcagttcctcaaggcagtctggttatatctaaaaatatgccatttcattatcaaagccttgataaaatgaccagtgcctccagtcaagtcctattacaaaagaaaatagacttttattgaacttatgcaaataactctgtcaccataaaataagaatactcatgaatggtttctgaattctggagaaataaggtaaagggaaaggtaaatgtttaagttttgctcacaaaagtatagtttacccaattgctgtaagctgtaaatagtttaaaagaaaa---aaagaaagacttttttactctgtaaacaaaatgtga-tcagcaatgtttcaaacaaaaagttatac-aagttatttcagtccagtatcagttcatgtatttagttctcactctgtttaatgttgtgttagcaatcctcatgaacacatcagttttggttctggttttgttttaaagttctggaagtttttaagtagtctaataggatgatctccaaagttatcagaaaccctcatttaag s panTro5.chr2A 1288513 1367 + 111504155 CAGTGTTGCAGAGTGGcagaaatgagccttcagtcaagtctctgattttcatagctgctgttgcttattgaatcatctctagtctttggaatgctgcggtttcagttttctcagaagtaaaacaataagacatgcataacattgataatttgaagagtagaaacatagtgcatgtaaggattttaataaagaagaaaatttttaagccagaatgaaaaaaagagaacctattctattaggaagtcaactaaaaacttcatg-aataaaattaaatttaggttcttctttagagacttcttggagccaggaaataattcagaattcagcctaagttgtaagcaaa-taataaaaattcaaaaacaatggtcagcgctagaatctaataacaggtgtgcagttggaacataaattttctctctccagtcccccagttttaccaaagataaatcatagtaggcccaatttatttttaaaataagttttagttttattacattaggcctggttatttgcataaagtgcagcaataataatgactggccacatgggttccttctacgttggttttgccagaatattttcttagggaatttcagattagactctttaaagactcttgaggctgggaagccaagccaagtattgaccatcagactgtgctggtagta-tctgtatgaattgggtgaattccttccttttcaagttcccaaaatatctttaggttcctaggcctgtctgaaagtgatgtt--ctgtacttgccgcaaggtcaggaatcttgtaaggaaaccttgtaagcaagtgaccatgccagtctttccaaggtactatttactggccctataaagtcaacgtcagttcctcaaggcagtctggttatatctaaaaatatgccatttcattatcaaagccttgataaaatgaccagtgcctccagtcaagtcctattacaaaagaaaatagacttttattgaacttatgcaaataactctgtcaccataaaataagaatactcatgaatggtttctgaattctggagaaataaggtaaagggaaaggtaaatgtttaagttttgctcacaaaagtatagtttacccaattgctgtaagctgtaaatagtttaaaagaaaa---aaagaaagacttttttactctgtaaacaaaatgtga-tcagcaatgtttcgaacaaaaagttacac-aagttatttcagtccagtatcagttcatgtatttagttctcactctgtttaacgttgtgttagcaatcctcatgaacacatcagttttggttctggttttgttttaaagttctggaagtttttaagtagtctaataggatgatctccaaagttatcagaaaccctcatttaag i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1249555 1367 + 114371477 CAGTGTTGCAGAGTGGcagaaatgagccttcagtcaagtctctgattttcatagctgctgttgcttattgaatcatctctagtctttggaatgccgcggtttcagttttctcagaagtaaaacaataagacatgcataacattgataatttgaagagtagaaacatagtgcatgtaaggattttaataaagaagaaaaattttaagccagaatgaaaaaaagagaacctattctattaggaagtcaactaaaaacttcatg-aataaaattaaatttaggttcttctttagagacttcttggagccaggaaataattcagaattcagcctaagttgtaagcaaa-taataaaaattcaaaaacaatggtcagcgctagaatctaataacaggtgtgcagttggaacataaattttctctctccagtcccccagttttaccaaagataaatcatagtaggcccaatttatttttaaaataagttttagttttattacattaggcctggttatttgcataaagtgcagcaataataatgactggccacatgggttccttctacgttggttttgccagaatattttcttagggaatttcagattagactctttaaagactcttgaggctgggaagccaagccaagtattgaccatcagactgtgctggtagta-tctgtatgaattgggtgaattccttccttttcaagttcccaaaatatctttaggttcctaggcctgtctgaaagtgatgtt--ctgtacttgcctcaaggtcaggaatcttgtaaggaaaccttgtaagcaagtgaccatgccagtctttccaaggtactatttactggccctataaagtcaacgtcagttcctcaaggcagtctggttgtatctaaaaatatgccatttcattatcaaagccttgataaaatgaccagtgcctccagtcaagtcctattacaaaagaaaatagacttttattgaacttatgcaaataactctgtcaccataaaataagaatactcatgaatggtttctgaattctggagaaataaggtaaagggaaaggtaaatgtttaagttttgctcacaaaagtatagtttacccaattgctgtaagctgtaaatagtttaaaagaaaa---aaagaaagacttttttactctgtaaacaaaatgtga-tcagcaatgtttcgaacaaaaagttacac-aagttatttcagtccagtatcagttcatgtatttagttctcactctgtttaacgttgtgttagcaatcctcatgaacacatcagttttggttctggttttgttttaaagttctggaagtttttaagtagtctaataggatgatctccaaagttatcagaaaccctcatttaag i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1275156 1362 + 1464242 CAGTGTTGCAGAGTGGcagaaatgagccttcagtcaagtctctgattttcatagctgttgttgcttattgaattatctctagtttttggaatgccacggtttcagttttctcagaagtaaaacaataagaaatgcataacattgataatttgaagagtagaaatatagtgcatgtaaggattttaataaagaagaaaatttgtaagccagaatgaaaaaaagagaacctattctattaggaagtcaactaaaaacttcatg-aataaaattaaatttaggttcttctttagagacttcttggagccaggaaataattcagaattcagcctaagttgtaagcaaa-taataaaaattcaaaaacaatggtcagcgctagaatctaataacaggtgtgcagttggaacataaattttctctctccagt-ccccagttttaccaaagataaatcatagtaggcccaatttatttttaaaacaagttttagttttattatattaggcctggttatttgcataaagtgcagcaataataatgattggccacctgggttccttctaagttgcttttgccagaatattttcttagggaatttcagattagactctttaaagactcttgaggctgggaagccaagccaagtattgaccatcagactgtgctggtagta-tctgtatgaattgggtgaattccttccttttcaagttcccaaaatatctttaggttcctaggcctgtctgaaagtgatgtt--ctgtccttgctgcaaggtcagaaatcttgtaagggaaccttataagcaagtgaccatgccagtctctccaaggtactacttactggccctataaagtcaacatcagttcctcaaggcagtctggttatatctaaaaatatgccatttcattatcaaagccttgataaaatgaccagtgcctccagtcaagtcctattacaaaagaaaatagacttttattgaacttatgcaaataactctgtcaccataaaataagaatactcatgaatggtttctgaattctggagaaataaggtaaagggaaaggtaaatgtttaagttttgctcacaaaagtatagtttacccaattgctgtaagctgtaaatagtttaaaagaaaa-------aaagacttttttactctgtaaacaaaatgtga-tcagcaatgtttcgaacaaaaagttatac-aagttatttcagtccagtatcagttcacgtatttagttctcgctctgtttatcgttgtgttagcaatcctcatgaacacatcagttttggttctggttttgttttaaaattctggaagtttttaagtagtctaataggatgatctccaaagttatcagaaaccctcatttaag i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1006186 1368 + 81552678 cagtgtcgcagagtggcagaaatgagccttcagtcaagtctctgattttcatggctgctgttgcttattgaatcatctctagtctttggattgccacggtttcagttttctcagaactaaaacaataagaaatgcataacattgataatttgaagagtagaaatatagtgcatgtaaggattttaataaagaagaaaatttgtaagccagaatgaaaaaaggagaacctattctattaggaagccaactaaaaatttcatg-aataaaattaaatttaggttcttctttagagacttcttggagccaggaaataattcagaattcagcctaacttgtaggcaaa-taataaaaattcaaaaacaatggtcagcactagaatctaataacaggtgtgcagttggaacataaattttctctctccagtcccccaattttaccaaagataaatcatagtaggcccaatttatttttaaaataagttttagttttattttattaggcctggttatttgcataaaatacagcaagaataatgattggccacatcggttccttctaagttggttttgccagaatattttcttagggaatttcagattagactcgttaaatcctcttgaggctgggaagccaagccaaggatttaccatcagactgtgccggtagta-tctgtatgaattgggtgaattccttccttttcaagttcccaaaatatctttagggtcctaggcctgtttgaaagtgacgtt--ctgtacttgccgcaaggtcagaaatcttgtaagggaacctcgtaagcaagttaccgcaccggtttttccaaggtacttcttattggccctataaactcaatgtcagttcctcaaagcagtctggttatatctaaaaatatgccatttcattatcaaagccttgatgaaattaccagtgcctccagtcacgtcctgtcacaaaagaaaatagactcttactgagcttatgcaaataactctttcaccataaaataagaatacccatgagtagtttctgaattctggagaaatcaggtagagggaaaggtaaatgtttaagttttgctcccaaaagtatagtttacccaattgctgtaagctgtaaatagtttaaaagaaaa---aaagaaagacttttttactctgtaaacaaaatgtgattcagcaatgtttcaaacaaaaagttatac-aagttatttcagtcctatatcagttcatgtatttagttcttgttctgtttaatgttgggttagcaatcctcatgaacacatcagttttggttctggttttgttttaaagttctggaagtttttaaatagtctaataggatgatctccaaaattattagaaaccctcatttaag i nomLeu3.chr19 C 0 C 0 s saiBol1.JH378218 1157379 1356 - 7082604 tggtgtcacagagtggcagaaattagccctcactcaagtctccaactttcctagctgctgtcac-tgttgaatcatctctagtctttggaatgccacaatttcagttttctcagatgtaaaacaataagaaatgcataacattaataatttgaagagtagaaatataatgcatgtaaggatttt-attaagaagaaagtttgttgcctggaatgaagaaa-gagaacctgttccattaggaagtcaatt-aaaacttcatgaaaaaaaataaaatttagtttcctctttagagacttcttggagccagaaaatgattcaagatttagcccaaattgtagacaaattaataaaaattcaaaaacaatggtcagc-ctagaatctaattacaggtgtgcaactggaacataaattttctctctacagccccccaattttaacaaagttagatcatagtaggcccgatttatttttaaagtaagttttagttttattgtattaggcctggctatttgcataaagtacagcaagaataatgattggccacataggttccttctaagttggttttgccagaatattttcttaggaatttccagatgagactctccgaagtctcttgaggctagggagccaaaccaaggatttg-catcagactgtgctggtaggattctgtgtgagttgggtggatttcttccttttcaagctcccaaaataccttgaggttcctaggcctgtctgaaaatgacatttactatacttactgcaaggttataaatcttgtaagggaagctggtaaacaaattaccacaccagtctttccaagggacttttcattggtcctatagagtcaacgttaattcctcaaagcagtctggttatatctaacaatatcccatttcattatcaaagccttgatgaaattaccagagcctccaattaagtcctattataaaagaaaatagactcttgttaaacttaggtaaataactccatcaccataaaataagaatactcatgaatagtttctgaattctggaggaatcaggtagagagaaaggtaaatgtttaag-tttgctcacaaaagtatcgtttacccaattactttaagctataaatagtttaaaaggaaaaacaaaaaaagactttcttactctgttaacaaaatgcgattcagcaatgtttcaatcaaaaagttatacaaaattatttcagtcctgtttcagtttatgtaattagttcctgttctgtttaatgttggattagcaatcctcatgaacccatcagttt------tgttattgttttaaagtcctggaag--------tagtctaatagtatgatctctaaacttatgagaaaccttcatttaag i saiBol1.JH378218 C 0 M 445 e cebCap1.NW_016107827v1 1247804 2308 + 1864846 I e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=470480.000000 s hg38.chr2_KI270774v1_alt 10224 536 + 223625 tgtacttgtgatccttcgttcattttgttaataagattcaaagcttttactgtagttga--ttatgcttttttagaaaagttacagtgaaacaataattgcctgtgggtgacaaaagacagaatagccatggttaaagactcaattggcaaagaaatttggttatttctgtgacatacagcaattaaacgtagtcaggattatcactgataatatatacctaggcatatcagatttttttttt-ttgagatggagtctcactctgtcacccaggctggaatgcagtggtgtgatctcagctcaccgccacctctgcctcccggtttcaagtgattctcttgcctcagcctcctgagtaactgggattacaggcacctgtgaccacgcccagctaattttatatttttagtagagatggggtttcaccatgttggcaaggatggtctcgatctcctgacctccagtgatccacctgcctcagcctcccaaagtgctgggattacaggcatgagccgctgcacccagcctgcatatcagat s panTro5.chr2A 1289880 534 + 111504155 tgtacttgtgatcctttgttcattttgttcataagattcaaagcttttactgtagttga--ttatgcttttttagaaaaattacagtgaaacaataattgcctgtgggtgacaaaagacagaatagccatggttaaagactcaattggcaaagaaatttggttatttctgtgacatacagcaattaaacgtagtcagaattatcactgataatatatacctaggcatatcagatttttttttt---gagatggagtctcactctgtcacccaggctggagtgcagtggtgtgatcttggctcaccgccacctccgcctcccgggttcaagtgattctcctgcctcagcctcctgagtaactgggattacaggcacctgtgaccacgcccagctaattttatatttttagtagagacagggtttcaccatgttggcaaggatggtcttgatctcgtgacctccggtgatccacctgcctcagcctcccaaagtgctgggattacaggcatgagtcgttgcacccagccaacatatcagat i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1250922 534 + 114371477 tgtacttgtgatcctttgttcattttgttcataagattcaaagcttttactgtagttga--ttatgcttttttagaaaaattacagtgaaacaataattgcctgtgggtgacaaaagacagaatagccatggttaaagactcaattggcaaagaaatttggttatttctgtgacatacagcaattaaacgtagtcagaattatcactgataatatatacctaggcatatcagatttttttttt---gagatggagtctcactctgtcacccaggctggagtgcagtggtgtgatcttggctcaccgccacctccgcctcccgggttcaagtgattctcctgcctcagcctcctgagtaactgggattacaggcacctgtgaccacgcccagctaattttatatttttagtagagacagggtttcaccatgttggcaaggatggtcttgatctcgtgacctccggtgatccacctgcctcagcctcccaaagtgctgggattacaggcatgagtcgttgcacccagccaacatatcagat i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1276518 534 + 1464242 tgtacttgtgatcctttgttcattttgttaataagattcaaagcttttactgtagttga--ttatgcttttttagaaaagttacagtaaaacaagaattgcctgtgggtgacaaaagacagaatagccatggttaaagactcaattggcaaagaaatttggttatttctgtgacatacagcaattaaatgtagtcagaattgtcactgataatatatacctaggcatatcagatttttttttt---gagatggagtctcactctgtcacccaggctggaatgcagtggtgtgatctcggctcaccgccacctccgcctccagggttcaagtgattctcctgcctcagcctcctgagtaactgggattacaggcacctgtgaccacgcccagctaattttgtatttttagtagagacggggtttcaccatgttagcaaggatggtctcgatctcctgacctctggtgatccacctgcctcagcctcccaaagtgctgggattacaggcataagccgctgcacccagccggcatatcagat i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1007554 539 + 81552678 tgtacttgtgatcctttgttcattttgttaataagattcaaagcttttactgtagttgattttatgcttttttagaaaagttacagtaaaacaataattgcctgtgggtgacaaaagacagaatagccatggttaaagactcagttggcaaataaatttggttatttctgtgacatacagcaattaaatatagtcagaattatcactgataacatatacctaggcatatcagatttttttttttttgagatggagtctcactctgtcagccaggctggaatgcaatagtgtgatcttggctcactgcaacctccgcctcctgggttcaagtgattctcctgcctcagcctcctgagtagccgggattacaggcacctgtgaccacgtccagctaattttgtatttttagtagagatggggcttcaccatgttggcaaggatggtctcgatctcctgacctcaggtgatccgcccgcctcagcctcccaaagtgctgggattacaggcatgagccaccgcacccagccggcatatcagat i nomLeu3.chr19 C 0 C 0 e saiBol1.JH378218 1158735 445 - 7082604 M e cebCap1.NW_016107827v1 1247804 2308 + 1864846 I e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=251009.000000 s hg38.chr2_KI270774v1_alt 10760 217 + 223625 tttttaaagacatcttatacaattttggtacatatatttataatatatccaaacaaatataacaaataagtt-aaaacgactttttatgtgatattgtttctcttatgatttttacataccaaggaaacgtaatatgcctttcttggacttgcaggagccctatttggacttccagaggtcttaatgttcaaaaattattttaaggtcaaaaaggcaa s panTro5.chr2A 1290414 217 + 111504155 ttttaaaagaaatcttatacaattttggtacatatatttataatatatccaaacaaatataacaaataagtt-aaaaccactttttatgtgatattgtttctcttatgatttttacataccaaggaaacgtaatatgcctttcgtggacttgcaggagccctatttggacttccagaggtcttaatgttcaaaaattattttaaggtcaaaaagacaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1251456 217 + 114371477 tttttaaagaaatcttatacaattttggtacatatatttataatatatccaaacaaatataacaaataagtt-aaaaccactttttatgtgatattgtttctcttatgatttttacataccaaggaaacgtaatatgcctttcgtggacttgcaggagccctatttggacttccagaggtcttaatgttcaaaaattattttaaggtcaaaaagacaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1277052 215 + 1464242 tttt-aaagaaatcttatacaattttggtacatatatttataatatatccaaacaaatataacaaataagtt-aaaaccac-ttttatgtgatattgtttctcttatgatttttacataccaaggaaacgtaatatgcctttcttggacttgcaggagccctatttggacttccagaggtcttaatgttcaaaaattattttaaggtcaaaaagacaa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1008093 218 + 81552678 tttttaaagaaatcttatacaattttggtacacatatttataatatatccaaacaaatataacaaataagttaaaaaccactttttatgtgatattgtttctctcatgattataacataccaagtaaacgtattatgtctttctcagacttgcaggggacctatttggacttccagaggtcttaatgttcaaaaattattttaaggtcgaaaagacaa i nomLeu3.chr19 C 0 C 0 s cebCap1.NW_016107827v1 1250112 208 + 1864846 tttttgaagaaattttatataattttggtacacatatttataatatatcc-aacaaatataacaagtta----aaaaccacttctcatgtgatattgcttctcttatgacttttacataccacataagcataaaatgtccttcttggacctgcaggggcactatgtgggcttccagagctcttagtcttcaaaaa-----ttaaagtcgaaaagacaa i cebCap1.NW_016107827v1 I 2308 C 0 e saiBol1.JH378218 1158735 445 - 7082604 M e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=3934562.000000 s hg38.chr2_KI270774v1_alt 10977 2369 + 223625 ttttagattttgaaattttattttggaaagcctatatcaaatatctcaaaggtttaacacacttgaacaaaacagcaacacaagtcactgagaaataacagtgattcatttaaacaaagtgataatcaaaagatttcaacagcaaaaaccattactctttgatagagaggatatgcagttttcgaaacaattaacagacttcgtaaaggaagcatgaggccaacagaatctgtcactctcccc-cccaccctttttgcaatctactctgaatgtaaatgaaaaatcttttactatctcctattaatattacatgaaaatcttgctcaaaacaaaaaaaa--tcacctttgcattggcatattattaatgctgaagcaaattttaataaaatcttataaacgaatccatttaatctcaatcagctttgacacacaagataaaattttcataaatattttataacctcttacacatttttccattctctttcttttctcaactttgtatatccttcagtttatctttttctttcttcttttattctttccattaaatgcaaccttagaataacctttacattaggcaaagccactttcctgtaataaaatcacacccccaagtctttcttgaaagcttccttacaaaaaatatatcttcttatattttttatataagaataagtatattttcttatactctctgtatatagaattgtttctcctcttatctccagtttttgttgctggaaattagttagaattttaactcttagtagccttaatgtatagtgtaaacctaagaagtaagggattttt------------ttttaactgtca------------------------ctcaggtaccaacaatttatgaatacacattttataatcttagaaacataggctttctaatggaacaatgtttcaatttggaacaggacatttttactaacagatttcaatatcatttgtttctctgaaataag---gcaaaa-tatataagcttaaactcatatttaataattgctgtcttagtattatat-ctatttggaaatgactgatatgttcgatgaatatcatcatcatttaatttagcttagcaaagctttaagggtacagttaccaaaaactttgagaagcctttttaagtaaacatattataaaacaattattactaaaagttcatttataaactttatcccatttacagctgtttaatttatctattcattctaattttttggaaaatttcatgggacattagacaaatccagccattgtgtcaagttaaattttctgttaaccatttttatattactgtatgttatgcaggtatcgtaaaagcaagaaccttaaagttaaatgcaagcataatttactgataactccaaaaac--agttgtttttattaaacaaacaatattaagctagttttatttaccaaaattcttactcaaa-ttacctgaacttggaaaatatttgggtttactt-----atttatgaacactcacttatctttaagttagtttagtactgtattagtctgttcttgtattgctctaaagaaatacctgaggctgagtaatttataaagaaaagagatatacttagtttatgcttctgcatgctgtacaggaaggatgatactggcatctagtc-gcttctggggaggcctcaggaaacttttactcatggtggaaggtgaagggggagccagcacgtcacacagccagagcaaggggggcga-gggatgccatccacctttaaacaaccccatctcgtgagaactctatcatgagaacagcactagggggatggtgctgaaccacgagaacccaccccatgatccaggcacctcccaccaggccccacctccagcactgggaatgacaattccatgtgagatttgggtggggacacagatccaaaccatgttaggtaccatgtaggtaatatacaaacatgtggatagacacgtacatgcatgcagata----caACATATGACATACGTGTACCTGTGTATGTATCTAAATGTTTaaaaattaaggaatttaataaaaaagaatagagctttacacctgagaagaagctgtccacccacaactctggggctccgtgaggaaaaagagttcctctccaaaaaa---gagttttgtggcaccaattctggtttcctcaagaggtcttagggctgttagaagatttttttaggtcctctcttgtggtattgaacgggacaggagaaagaaggaacagaaagaagtaaat-gaaggacagatcttagaggagacagatggaggagctcttgttttccaaaaagctaataaagtttcacattatccttggcaaaaattctatcaactagtggagaaacacacaaaatgagtgcattggttagcaggggtttaag s panTro5.chr2A 1290631 2345 + 111504155 ttttagatgttgaaattttattttggaaagcctatatcaaatatctcaaaggtttaatacacttgaacaaaacagcaacacaagtcactgagaaataacagtgactcatttaaacaaagtgataatcaaaagatttcaaaagcaaaaaccattgctctttgatagagaggatatgcagtttttgaaacagctaacagacttcgtaaaggaagcatgaggccaacagaatctgtcactctcccctcccaccctttttgcaatctactctgaaggtagatgaaaaatcttttactatctcctattaaaattacatgaaaatcttgctcaaaacaaaaaaaa-atcacctttgcattggcatattattaatgctgaagcaaattttaataaaatcttataaacaaatccatttaatctcaatcagctttgacacacaagataaaattttcataaatattttataacctcttacacatttttccattctctttcttttctcaactttgtatatccttcagtttatctttttctttcttcttttattctttccattaaatgcaaccttagaataacctttacattaggcgaagccactttcctgtaataaaatcacaaccccaagtctttcctgaaaccttccttacaaaaaatacatcttact---------------------------tttcttatactctctgtatatagaattgtttctcctcttatctccagtttttgttgctggaaattagttagaattttaactcttagtagccttaatgtatagtgtaaacctaagaagtaagggattttt------------ttt-aactgtca------------------------ctcaggtaccaacaatttatgaatacacattttataatcttagaaacataggctttctaatggaacaatgtttcaatttggaacaggacatttttactaacatatttcaatatcatttgcttctctgaaataagaaggcaaaa-tatataagcttaaactcatatttaataattgctgtcttagtattatat-ctatttggaaatgactgatatgttcgatgaatatcatcatcatttaatttagcttagcaaagctttaagggtacagttaccaaaaactttgagaagcctttttaagtaaacatattataaaacaattattactaaaagttcatttataaactttatcccatttacagctgtttaatttatctattcattctaattttttggaaaatttcatgggacattagacaaatccagccattgtgtcaagttaaattttctgttaaccatttttgtattactgtatgttatgcaggtatcataaaagcaggaaccttaaagttaaatacatgcataatctactgataactccaaaaac---gttgtttttattaaacaaacaatgttaagctagttttatttaccaaaattcttattcaaa-ttacctgaacttggaaaatatttgggtttactt-----atttatgaacactcacttatatttaagttagtttagcactgtattagtctgttcttgcattgctctaaagaaatacctgaggctgagtaatttataaagaaaagagatatacttagtttatgcttctgcatgctgtacaggaaggatgatgctggcatctagtt-gcttctggggaggcctcaggaaacttttactcatggtggaaggtgaagggggagccagcacgtcacacagccagagcaaggggggcaa-gggatgccatccacctttaaacaaccccatctcgtgagaactctatcatgagaacagcactagggggatggtgctgaaccacgagaacccaccccatgatccaggcacctcccaccaggccccacctccagcactggggatgacaattccatgtgagatttgggtggggacacagatccaaaccatgtcaggtaccatgtaggtaatatacaaacatgtggatagacacgtacatgcatgcagata----caacatatgacatacatGTACCTGTGTATGTATCTAAATGTTTaaaaattaaggaatttaataaaaaagaatagagctttacacctgagaagaagctgtccacccacaactctggggctccatgaggaaaaagagttcctctccaaaaaa---gagttttgtggcaccaattctggtttcctcaaggggtcttagggctgttagaagatttttttaggtcctctcttgtggtattgaaggggacaggagaaagaaggaacagaaagaagtaaat-gaaggacagatcttagaggagacagatggaggagctcttgttttccaaaaagctaataaagtttcacattatccttggcaaaaattctatcaactagtggagaaacacacaaaatgagcgcattggttagcaggggtttaag i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1251673 2343 + 114371477 ttttagattttgaaattttattttggaaagcctatatcaaatatctcaaaggtttaatacacttgaacaaaacagcaacacaagtcactgagaaataacagtgactcatttaaacaaagtgataatcaaaagatttcaaaagcaaaaaccattgctctttgatagagaggatatgcagtttttgaaacagctaacagacttcgtaaaggaagcatgaggccaacagaatctgtcactctcccctcccaccctttttgcaatctactctgaaggtagatgaaaaatcttttactatctcctattaaaattacatgaaaatcttgctcaaaacaaaaaaaaaatcacctttgcattggcatattattaatgctgaagcaaattttaataaaatcttataaacaaatccatttaatctcaatcagctttgacacacaagataaaattttcataaatattttataacctcttacacatttttccattctctttcttttctcaactttgtatatccttcagtttatctttttctttcttcttttattctttccattaaatgcaaccttagaataacctttacattaggcgaagccactttcctgtaataaaatcacaaccccaagtctttcctgaaaccttccttacaaaaaatacatcttact---------------------------tttcttatactctctgtatatagaattgtttctcctcttatctccagtttttgttgctggaaattagttagaattttaactcttagtagccttaatgtatagtgtaaacctaagaagtaagggattttt------------ttt-aactgtca------------------------ctcaggtaccaacaatttatgaatacacattttataatcttagaaacataggctttctaatggaacaatgtttcaatttggaacaggacatttttactaacatatttcaatatcatttgcttctctgaaataag---gcaaaa-tatataagcttaaactcatatttaataattgctgtcttagtattatat-ctatttggaaatgactgatatgttcgatgaatatcatcatcatttaatttagcttagcaaagctttaagggtacagttaccaaaaactttgagaagcctttttaagtaaacatattataaaacaattattactaaaagttcatttataaactttatcccatttacagctgtttaatttatctattcattctaattttttggaaaatttcatgggacattagacaaatccagccattgtgtcaagttaaattttctgttaaccatttttgtattactgtatgttatgcaggtatcataaaagcaggaaccttaaagttaaatacatgcataatctactgataactccaaaaac---gttgtttttattaaacaaacaatgttaagctagttttatttaccaaaattcttattcaaa-ttacctgaacttggaaaatatttgggtttactt-----atttatgaacactcacttatatttaagttagtttagcactgtattagtctgttcttgcattgctctaaagaaatacctgaggctgagtaatttataaagaaaagagatatacttagtttatgcttctgcatgctgtacaggaaggatgatgctggcatctagtt-gcttctggggaggcctcaggaaacttttactcatggtggaaggtgaagggggagccagcacgtcacacagccagagcaaggggggcga-gggatgccatccacctttaaacaaccccatctcgtgagaactctatcatgagaacagcactagggggttggtgctgaaccacgagaacccaccccgtgatccaggcacctcccaccaggccccacctccagcactggggatgacaattccatgtgagatttgggtggggacacagatccaaaccatgtcaggtaccatgtaggtaatatacaaacatgtggatagacacgtacatgcatgcagata----caacatatgacatacatGTACCTGTGTATGTATCTAAATGTTTaaaaattaaggaatttaataaaaaagaatagagctttacacctgagaagaagctgtccacccacaactctggggctccatgaggaaaaagagttcctctccaaaaaa---gagttttgtggcaccaattctggtttcctcaaggggtcttagggctgttagaagatttttttaggtcctctcttgtggtattgaaggggacaggagaaagaaggaacagaaagaagtaaat-gaaggacagatcttagaggagacagatggaggagctcttgttttccaaaaagctaataaagtttcacattatccttggcaaaaattctatcaactagtagagaaacacacaaaatgagcgcattggttagcaggggtttaag i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1277267 2338 + 1464242 ttttagattttgaaattttattttggaaagcctatatcaaatatctcaaaggtttaacacacttgaacaaaacagcaacacaagtcactgagaaataacagtgattcatttaaacaaagtgataatcaaaagatttcaaaagcaaaaaccattactctttgatacagaggatatgcagttttcgaaacaactaacagacttcgtaaaggaagcatgaggccaacataatctgtcactgtcccctcccaccctttttgcaatctactctgaaggtaaatgaaaaatcttttactatctcctatgaatattacatgaaaatcttgctcaaaacaaaaaaaaaatcacctttgcattggcgtattattaatgctgaagcaaattttaataaaatcttataaacaaatccatttaatctcaatcagctttgacacacaagataaaattttcataaatattttataacctcttaaacatttttccattctctttcttttctcaactttgtatatccttcagtttatatttttct---ttcttttattctttccattaaatgcaaccttagaataacctttacattaggcaaagccactttcctgtaataaaatcacaccctcaagtctttcttgaaaccttccttacaaaaaatatatcttact---------------------------tttcttatactctctgtatatagaattgtttctcctcttatctccagtttttgttgctggaaattagttagaattttaactcttagtagccttaatgtatagtgtaaacctaagaagtaagggattttt------------ttt-aactgtca------------------------ctcaggtaccaacaatttatgaatacacattttataatcttagaaacataggctttctaatggaacaatgtttcaatttggaacaggaca-ttttactaacagatttcaatatcatttgtttctctgaaataagaaggcaaaa-tatataagcttaaactcatatttaataattgctgtcttagtattatat-ctatttggaaatgactgatatgttcgatgaatatcatcatcatttaatttagcttagcaaagctttaagggtacagttaccaaaaacgttgagaaggc---ttaagtaaacatattataaaacaattattactaaaagttcatttataaactttatcccatttacagctgtttaatttatctattcattctaattttttggaaaatttcatgggacattagacaaatccagccattatgtcaagttaaattttctgttaaccatttttatattactgtatgttatgcaggtatcataaaagcaagaaccttaaagttaaatacatgcataatttactgataactccaaaaac--agttgtttttattaaacaaacaatattaagctagttttatttaccaaaattcttactcaaa-ttacctgaacttggaaaatatttgggtttactt-----atttatgaacactcacttatctttaagtaagtttggtactgtattagtctgttcttgcattgctctaaagaaatacctgaggctgagtaatttataaagaaaagagatatacttagcttatgcttctgcatgctgtacaggaaggatgatgctggcatctagtc-gcttctggggaggcctcaggaaacttttactcatggtggaaggtgaagggggagccagcatgtcacacagccagagcaa-gggggcga-gggatgccatccacctttaaacaaccccatctcgtgagaactctatcatgagaacagcacta-ggggatggtgctgaaccacgagaacccaccccatgatccaggcacctcccaccaggccccacctccagcactggggatgacaattccatgtgagatttgggtggggacacagatccaaaccatgtcaggtaccatgtaggtaatatacaaacatgtggatagacacatacatgcatgcagata----caacatatgacatacatGTACCTGTGTATGTATCTAAATGTTTaaaaattaaggaatttaataaaaaagaatagagctttacacctgagaagaagctgtccacccacaactctggggctccatgaggaaaaagagttcctctccaaaaaa---gagttttgtggcaccaattctggtttcctcaagaggtcttagggctgttagaagatttttttaggtcctctcttgtggtattgaaggggacaggagaaagaaggaacagaaagaagtaaat-gaaggacagatcttagaggagacagatggaggagctcttgttttccaaaaagctaataaagtttcacattatccttggcaaaaattctatcaactagtggagaaacacacaaaatgagcacattggttagcaggggtttaag i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1008311 2353 + 81552678 ttttagattttgaaattttattttggaaagcccatatcaaatatctcaaaggtttaacacactggaacaaaacaggaacacaagtcactgagaaataacagtgattcatttaactaaagtgataatcaaaagatttcaaaagcaaaaactattactctttgatagagaggatgtgcagttttcgaaacaattaacagacttcataaaggaagcatgaggccaacagaatgtgtcactctcccctcccaccctttttgcaatctactctgaagggaaatgaaaaatcttttactatctcctattaatattacatgaaaatcttgctcaaaacaaaaaaaa---cacttttgctttggcgtattattaatgctgaagcaaattttaataaaatcttataaacaaatccatttaatctcaatcagctttgacacacaagataaaattttcgtaaatattttataatctcttacacatttttccattc----tcttttctcaactttgtatatccttcactttatct---------ttcttttattctttccatttaatgcaaccttagaataacctttacattaggcaaagccactttcctgtaataaaatcacacccccaagtctttcttgaaaccttccttaccaaaaatatatcttact---------------------------tttcttatactctctgtatatagaattgtttctcctcttatctctagtttttgttgctggaaattagtcagaattttaactcttagtagccttaatttatagtgtaaacctaagaagcagtttatatctaaaaatatgccattt-cattatcaaagccttgataaaattaccagtgcctcaggtaccaacaatttatgaatacaca-tttataatcttagaaacataggctttctaatggaacaatgtttcaatttggaacaggatgtttttactgacagatctaaatatcatttgtttctctgaaataagaaggcaaaa-tatataagcttaaactcatatttaataattgctgtc--agtgttatat-ctatttggaaatgattgatatgttcaatgaat---atcatcgtttaatttagcttagcaaagctttaagggtacagttaccaaaaactttgagaagcctttttaagtaaacatattataaaacaattattactaaaagttcatttataaactttatcccatttatagct-----atttatctattcattctaattttttggaaaatttcatgagacattagacaaatccagcc-ttgtgtcaagttaaattttctgttaaccatttttatattactgtatgttatgcaggtatcataaaagcaagaaccttaaagttaaatacatgcataatttactgataactccaaaaac--agttg-ttttattaaacaaac-atattaagctagttttatttaccaaaattcttactcaaa-ttacctgaacttggaaaatatttgggtttactt-----atttatgaacactcatttatcttgaagttagtttggtactgtattagtctgttcttgcattgctctaaagaaatacctgagactaagtaatttataaagaaaagagatttacttagcttatgcttctgcacgctgtacaggaaggatgatgctggcatctagtcagcttctggggaggcctcaggaaacttttactcatggtggaaggtgaagggggagccagcacatcacacagccagagcaaggggggtga-gagatgccatccacctttaaacaaccccatctcgtgagaactgtatcatgagaacagcactagggggatggtgctggaccatgagaacccaccccatgatccaggcgcctcccaccaggccccacctccagcactggggatgacaattccatgtgagatttgggtggggacacagatccaaaccatgtcaggtaccatgtaggtaatatacaaacatgtggatagacacgtgcatgcatgcagata----caACATATGACATACTTGTACCTGTGTATGTGTCTAAATGTTTaaaaattaaggaatttaatgaaaaagaatagagctttacacctgagaagaagctgtccacccacaactctggggctccgtgaggaaaaagagttcctctccaaaaaa---gagttttgtgacaccaattctggtttcctcaagaggtcttagggctgttagaaga-ttttttaggtcctctcttgtggtattgaagggggcaggagaaagaaggaacagaaagaactaaat-gaaggacagatcttagaggagacagccggaggagttcttgttttccaaaaagttaataaagtttcacattatccttggcaaaaatcccgtcaactagtggagaagcacacaaaatgagcgcattagttagcaggggtttaag i nomLeu3.chr19 C 0 C 0 s saiBol1.JH378218 1159180 2344 - 7082604 tttaagaatttgaaatttga-tttggaaagcctatatcaaatatctaacaggtttaacacacttgaacaaaacagaaactcaggtcactgagaagtaacagcgatttattcagtccaagtgataatcaaaagatttcaaaagcaaaaaccctttctctttgatagagaggatatgcagttctc----caatgaacaggtttcacaaaggaagcgtgaggccagcagaatctgttaccctcccttcccgccctttttgcagtctacctcgaagctgaatggaaaaccttttattatcacctattaatactacatgaaaatcttgctcagaacaacaagta--tcgcctttgcattggcatattattaatgctaaagcaaattttaataaaaacttataaacaaatccattcaacctcaatcaactttgacatacaaggtaaaattttcataaatattttataacctcttacacattttttcattgtctttgttttctcaactttgtatatccttcagtttatctttttctttcttcttttgttctttcaatttaatgcaaccttagaataacctttagagtaggcaaagccactttcctttaacaaaatcacacccccaagtctttcttgaaaccttccttaccaaaaatatatcttact---------------------------tttcctatacgttctgtgtaaagaattgtttctcctcttatctctgattgttgttactgcaaattagccagaattttaactcttactagccttaatttatagtgtaaacctaagaagcaagcgattttt------------ttt-aactgtca------------------------ctcaggtactaacaatttatgaatacacattttataatcttagaaacacaggcttcctaacagaacaatgtttcaatttggaac-ggacatttttactaacagatgtaaatatcatttgtttctctgaaatcagaaggcaaaagtatataagcttaaactcatatttaatcattgctgtcttagtattatatcctatttggaaatgactgatatttttaatgaat---atcatcatttaatttagccaagcaaagctttaagggtatagttaccaaag---ttgagaagcctttttaagtgaacatgttataaaacaattattattaaaagttcatttgtaaactttatcccatttacagctatttattttatttattcattctaattttttagaaaatttcatgggatattagacaaatccagccattgtgtcaagttaaattttctattaataatttttatattatggtatgttatgcaggtatcataaaatcaagaaccttaaagttaaatacatgcataatttactgataactccaaagacatagttgtttatattaaacaaacaatattaaactagttttatttaccaaaattcttactcaaatttacatgaaattggaaaatatttaggtttacttatttaatttatgaacac-cagttatctttaagttagtttgatgctgtattattctattcttgcattgctctaaagaaatacctgagactgagtaatttacagggaaaagaggtttgcttagcttatgtttctgcacgctgtacaggaaggatgatgctggagtctcatctgctcctggggaggccttaggaatcttttactcatggcagaaggcaaagggagagccagcatgccacacggccagagccagaggagggcggggatgccacacgcttttaaacaaccagatcttgcgagaactctgtcatgagaacagcactagggggatggtgctg-accacaagaaccca-cccatgacccagtcacctcccaccaggccccacctccggcactggggctgacaattccatgtgagatttgggcagggacacaggtcc-aaccatgtcaagtgccagggaggtaatatacaa--aggtggataggcaagtacccgtgtacagatacaaTCAATATATGATATACATGGACCTGTGTTTGTATCTCAATGTTTaaaaattaaggaatttaatgaaaagaaatagagctttagacctgaaaagaagctgtccacccacagctctgggactccatgaggaaaaagagctcctttccaaaaca---gagttttagggaatcaattctggtttcctcaagagatcttagggctgttagaagatttttttaggtcctctcctgtggtactgaagggaacaggggaaagaaggaacagaaagaagtaaatggaaggccagatcttagaggagccagctggagggcctcttattttccaaaaggctaataaagttttacattatttttggtaaaaaatctgtcaactagtggagaaacacacagaatgagtgcattcgttagcaggggtttaag i saiBol1.JH378218 M 445 M 420 s cebCap1.NW_016107827v1 1250320 2341 + 1864846 tttaagaatttgaaatttgagtttggaaagcgtatatcatatatctaacaggtttaacacacttgaacaaaacaggaactcaagtcactgagaagtaacagtgattcatttaatccaagtgataatcaaaaggtttcgaaagcaaaaaccattactctttgatagagaggacgtgcagttctccaaacaatgaacagatttcacaaaggaagcgtgaggccaacagaatctgttactctaccctccggccctttttgcagtctactctgaagctgaatggaaaatctttcattatcacctgttaatactacatgaaaatcttgctcagaccaacaagta--tcacctttgcattggtacattattaatgctaaagcaaattttagtaaaaacttataaacaaatccattcaacctcagtcaactttgatatacacgataagattttcataaatattttataacctcttacacatgttttcattgtcttgattttctcaactttgcatatccttcagtttatctttttctttcttcttttattctttcaatttaatgcaaccttagaataacctttagagtaggcaaagccactttcctttaagaaaatctcacccccaactctttcttgaaaccttccttaccaaaaatatatcttact---------------------------tttcctatacattctgtataaagaattgtttctcctcttatctctaatttttgttactgcagattagtcagaattttaactcttactagccttaatttatagtgtaaacctaagaagcaagcgattttt------------ttg-aactgtca------------------------ctcaggtactaacaatttatgaatatgcattttataatcttagaaacataggcttcctaacagaacaatgtttcaatttggaatgggacatttttactaacagatgtaaatatcatttgtttctcggaaataagaaggcaaaagcatataagcataaactcatatttaatcattgctgccttagtattatatcctatttggaaatgaatgatatgtttaatgaat---atcatcatttaatttagcctagcaaagctttaagtgtatggttaccaaaa---ttgagaagcctttttaagtgaacgtgttataaaacaattattattaaaagttcatttataaactttattccatttacagctatttaatttatttattcattctaatttttaagaaaatttcatgggatattagacaaatccagccattgtgtcaagttgaattttctattaataatttttatattactgtatgttatgcaggtatcataaaagcaagaagc------ttaaatacatgcataatttactgataactccaaagacatagttgtttatattaaacaaacaatattaaactagttttatttaccaaaattcttactcaaatttagatgaaattggaaaatatttaggtttacttatttaatttatgaacac-cacttatctttaagttagtttgatactgtattagtctattcttgcattgctctaaagaaatacatgagactgggtaatttacagggaaaagaggtttacttagcttatgcttctgcatgctgtacaggaaggatgatgctggcatctcatcagctcatggggaggcgttaggaaacttttactcatggcggaaggcgaagggggagccagcacgctacacggccagagccagaggagggc-gggatgccacacgcttttaaacaaccagatcttgcgagaactctgtcatgagaacagcactagggggatggtgctg-accacgagaaccca-cccatgacacagtcacctcccacca-gccccacctccggcactggggctgacaattccatgtgagatttgggcagggacacaggccc-aaccacgtcaggtgccagggaggtaatatacaa--aggtggatagacatgtacatgtggacagata----caACATATGACATATATGGACCTGTGTATGTATCTCAACATTTaaaaattaaggaatttaatgaaaaggaatagagctttagacctgagaagaagctgtccacccacagctctgggactccatgaggaaaaagagctcctttccaaaacagaggagttttatggaatcaattctggtttcctcgagaggtcttagggctgttagaagatttttttaggtcctctcctgtggtactgaagggaacaggagaaagaaggaacagaaagaagtaaatggaaggccagatcttagaggagacagttggaggacctcttattttccaaaaggctaataaagttttacattatttttggcaaaaattctgtgaactagtggagaaacacacagaatgagtgcattcgttagcaggggtttaag i cebCap1.NW_016107827v1 C 0 C 0 e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=576688.000000 s hg38.chr2_KI270774v1_alt 13346 521 + 223625 aaaagagggactctgtcaccaagatgctttcatagaaagaacagaaGCCTCAAAAC--GTGTGTATCCACacac----acacatacacacacatgcac----gcacatatacacacatacacataca----cacacagatgcatacacacacatacacatgcacacgcatacacaca----------tgcatgcacacacaca--------------------------------------tgcacacatacacacacGCACAGATTCACACATGCacatatacacatacgcacatacacagacacattt----------acacacccacacacttaatac-tagctttaattaaggttacttttgactacagactcttaaaaaatccttttataaggtattagctgggcaattagcaaacattcctgg-----tttttTTTTCTTTTTTCTTTTTGGAATTTACAGAAAGAGTTTTAGAAGTGGGACATATTTGTTTATTAGAGATCTAGGGTAATCATTATTTAAAGCTGTTTGTCTTTGGCTTAATAAAATGTTTCCTTTTTCTCTGAGTAAATGGTTTTATTTAGCTTAAGAGAA s panTro5.chr2A 1292976 514 + 111504155 aaaagagagactctgtcaccaagatgctttcatagaaagaacagaaGCCTCAAAACATGTGTGTTTCCACacac----acacatacacacacatgcac----gcacatatacacacatacacataca----------gatgcatacaca----tacacatgcacacgcatacacaca----------tgcatgcacacacaca--------------------------------------tgcacacatacacacatgcacagattcacacatgcacatatacacatacgcacatacacagacacattt----------acacacccacacacttaatac-tcgctttaattaaggttacttttgactacagactcttaaaaaatccttttataaggtattagctgggcaattagcaaacattcctgg----gtttttttttcttttttCTTTTTGGAATTTACAGAAAGAGTTTTAGAAGTGGGACATATTTGTTTATTAGAGATCTAGGGTAATCATTATTTAAAGCTGTTTGTCTTTGGCTTAATAAAATGTTTCCTTTTTCTCTGAGTAAATGGTTTTATTTAGCTTAAGAGAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1254016 517 + 114371477 aaaagagggactctgtcaccaagatgctttcatagaaagaacagaaGCCTCAAAACATGTGTGTGTCcacacac----acacatacacacacatgcac----gcacatatacacacatacacataca----catacagatgcatacaca----tacacatgcacacgcatacacaca----------tgcatgcacacacaca--------------------------------------tgcacacatacacacatgcacagattcacacatgcacatatacacatacgcacat--acagacacattt----------acacacccacacacttaatac-tagctttaattaaggttacttttgactacagactcttaaaaaatccttttataaggtattagctgggcaattagcaaacattcctgg-----gttttttttcttttttcttTTTGGAATTTACAGAAAGAGTTTTAGAAGTGGGACATATTTGTTTATTAGAGATCTAGGGTAATCATTATTTAAAGCTGTTTGTCTTTGGCTTAATAAAATGTTTCCTTTTTCTCTGAGTAAATGGTTTTATTTAGCTTAAGAGAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1279605 521 + 1464242 aaaagagggactctgtcaccaagatgctttcatagaaagaacagaaGCCTCAAAAC--ATGTGTATCCACacac----acacatacacacacatgcac----gcacatatacacacatacacataca----catacagatgcatacacacacatacacaTGCACACGCATACACACA----------TGCATGGACACACACA--------------------------------------TGCACACATACACACATGCACAGATTCACACATGCacatatacacatacgcacatacacagacacattt----------acacacccacacacttaatac-tagctttaattaaggtta-ttttgactacagactcttaaaaaatcctttTATAAGGTATTAGCTGGGCAATTAGCAAACATTCCTGG----ttttttttttcttttttctttttGGAATTTACAGAAAGAGTTTTAGAAGTGGGACATATTTGTTTATTAGAGATCTAGGGTAATCATTATTTAAAGGTGTTTGTCTTTGGCTTAATAAAATGTTTCCTTTTTCTCTGAGTAAATGGTTTTATTTAGCTTAAGAGAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1010664 528 + 81552678 aaaagagggactccgtcaccaagatgctttcatagaaagaacagaaGCCTCAAAGCATGTGTGTATCcacacacacaaacacatacacccacatgcac----acacatacacatacatacacacaca----catacagatgcacacacacatgcacacatgaatacacatgcacaca----------tgcatgcacacacaca--------------------------------------tgcatgcacacatacatgcacaGATTCACACATGCACACATAAACATACGCACATACACAGACAAATTT----------ACACACCCACACGCTTACTAC-TAGATTTAATTAAGGTTACTTTTGAATACAGACTCTTAAAAAATCCTTTTATAAGGTATTAGCTGGGCAGTTAGCAAACATTCCTGGTTGCTGTTTTTTTTCTTTTTTCTTTTTGGAATTTAC----AGAGTTTTAGAAGTGGGACATATTTGTTTATTAGAGGTCTAGGGTAATCATTATTTAAAGCTGTTCATCTTTGGCTTAATAAAATGTTTCCTTTTTCTCTGAGTAAATGGTTTTATTTAGCTTAAGAGAG i nomLeu3.chr19 C 0 C 0 s cebCap1.NW_016107827v1 1252661 567 + 1864846 --aaaagggcctctgtcaccaagatgcttttagagaaagaacataaggctcaaaAT--GTGCGTGCTcacacac----acacacacacacacacacacaGAGGCACATGTGCACGTGCGcacacacacaggcacatatgtgcacacacacacaggcacatgtgcgcgcgcacacacagaagcacatgtgtgtgcacacacacacaggcacatgtgcgcacacacacacaggcacatgtgcgcgcacacacacacacaggcacatgtgcacccacacacacacacacataggcacatgtgcacacacacatgcatgcacacacagacacacacGCTTAATACACAGCTTTAATTAAGGTTACT---------------TAAAAAGATTGCTTTATAAGGTATTAGCTGGGCAATTAACAAACATTCCTGG---------TTTTTCTTTTTTCTTTTTGGAATTTACATAAAGAGTTTTAGAAGTGGGACGTACTTGTTTATTAGAGGTCTAGGGCAACCATTACGTAAAGCTGTTTGCCTTTGCCTTAATAAAACGTTTCCTTTGTCCCTGAGTAAATTGTTTTATTTAGCTTAAGAAAC i cebCap1.NW_016107827v1 C 0 C 0 e saiBol1.JH378218 1161524 420 - 7082604 M e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=449456.000000 s hg38.chr2_KI270774v1_alt 13867 300 + 223625 AAGGCTAaaaaacaacaacaacaacaaaaaATGTCTATCGCATTCTAAATATAAACCAAAAttttaaaccaaaggtgtatgtgcacagatgactcaaaatgaacacaaataaatatgcatgagcccaacttaagaagttctccctggcattaaccaaggtctccaaagatgaagcaaaactctccgccttttcaagatccagacacctccagggtcagcttgagaaagaaagttctggtagcatcagatggggtgcagctgtatctgtcaggtaaaatcttccagggtctcaCTTCTCAG s panTro5.chr2A 1293490 299 + 111504155 AAGGCTAAAAAACAACAACAACAA-AAAAAATGTCTATTGCATTCTAAATATAAAACAAAATTTTAAACCAAGGGTGTATGTGCACAGATGACTCAAAATGAACACAAATAAATATGCATGAGCCCAACTTAAGAAGTTCTCCCTGGCATTAACCAaggtctccaaagatgaagcaaaactctccgccttttcaagatccagacacctccagggtcagcttgagaaagaaagttctgctagcatcagatggggtgcagctgtatctgtcaggtaaaatcttccagggtctcaCTTCTCAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1254533 296 + 114371477 AAGGCTAAAAAACAACAACAAC---AAAAAATGTCTATTGCATTCTAAATATAAAACAAAATTTTAAACCAAGGGTGTATGTGCACAGATGACTCAAAATGAACACAAATAAATATGCATGAGCCCAACTTAAGAAGTTCTCCCTGGCATTAACCAaggtctccaaagatgaagcaaaactctccgccttttcaagatccagacacctccagggtcagcttgagaaagaaagttctgctagcatcagat-gggtgcagctgtatctgtcaggtaaaatcttccagggtctcaCTTCTCAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1280126 297 + 1464242 AAGGCTAAAAAACAACAACAAC---AAAAAATGTCTATCGCATTCTAAATATAAACCAAAATTTTAAACCAAGGGTGTATGTGCACAGATGACTCAAAATGAACACAAATAAATATGCATGAGCCCAACTTAAGAAGTTCTCCCTGGCATTAACCAAGGTCTCCAAAGTTGAAGCAAAACTCTCCGCCTTTTCAAGATCCAGACATCTCCAGGGTCAGCTTGAGAAACAAAGTTCTGCTATCATCAGATGGGGTGCAGCTGTATCTGTCAGGTAAAATCTTCCAGGGTCTCACTTCTCAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1011192 297 + 81552678 AAGGCTAAAAAACAACAACAAC---AAAAAATGTCTATCACATTCTAAATATAAACCAAAATTTTAAACCAAAGGTGTACGTGCACAGATGACTCAAAATGAACACAAATAAATATGCTTGAGCCCAAATTAAGAAGTTCTCCCTGGCATTAACCAAGGTCACCAAAGATGAAGCGAAACTCTCCGCCTTTTCAAGATCCAGACACTTCCAGGGTTAGCTTGAGAAAGAAAGTTCTGCTAGCATCAGACGGGGTGCAGCCGTATCTGTCAGGTGAAATATTCCAGGGTCTCACTTCTCAG i nomLeu3.chr19 C 0 C 0 s saiBol1.JH378218 1161944 265 - 7082604 AAGGCTAAAAAATAA-AATAAC---AAAAAATATCC----CATTCTAAATATAAACCAAAGttttaaaccaaaggtgtgtgtgcacagatgactcaaa--------------------atgagaccagcgtaagaagcccttcttggcattaaccagggcctccaaagatgaagcaaaactctctgccctttcaagatccagacccct-caaggacagcttgagaaagaaagTCCCGCT-CCATCAGACCGGGCGCGGCCGTATCTGCTGGGGGACACCTTCCA--GTCTCACTT---AG i saiBol1.JH378218 M 420 C 0 s cebCap1.NW_016107827v1 1253228 284 + 1864846 AAGGCTAAAAAATAA-AACAAC---AAAAAATATCTATCACATTCTAAATATAAACCAAAAttttaaaccaaaggggtatgtgcacagatgactcaaaatgagcac----aaacatgcatgagaccaacgtaagaagcccttcctggcgttaaccagggcctccaaagatgaagcaaaa--gtctgccctttcaagatccagacccctccaaggacagcttgagaaagaaagTTCCGCT-CCATCAGCCCGGATGTGGCCGTATCTGCCAGGGGACACCTTCCA--GTCTCACTT---AG i cebCap1.NW_016107827v1 C 0 C 0 e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e calJac3.chr14 1307679 7 - 108792865 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=2791634.000000 s hg38.chr2_KI270774v1_alt 14167 1372 + 223625 CTGCCTGTCTACGCACAATG---GCCAGGTTAAAAGGAACAGCCAGGAAAACAGGAAAACAAAAG-TGTCCATGGGGGTAGTGCAgggaagaaaatataattgcttttctttccttcatgtgttcttagttttgacactttcc-tgaaaacaaaagtccgattgacaagaagaaaccagcagaagtttattaatgagtgcTGTACGCATCGTGTGGGGGAGGCCTTTGACGCTTATTGACGAGTGTTGTACCCATCGTGTGGGGGAGGCCTCGGAAGTTTTT-CTCTGTC-----AAGAC----AGTTGCTTGGGGACTGTGCTCACATAGTATTTTTGCAAAGAACCACAAATCCTATA------TAGTGACTAAACAAAGAAAAGAGCATTTCCAGGCTTCCAAGAGGTGGGAAAATGTGGGAGGTGAATTTATGGGAAGAGTAAAATCTGTTCCTAGAGCCTCTGGTGCCACTGCCTCTGAGCAGATAAACAAGTGTTGTGAGGGGC--CTTTTGAGGTGGGAAAGGAGgagaggaggccaggaagctctatctttgtacactgctgttccgccatcaggctagtggaagatgggacaaggtccctggcattttcaccttcttcagctcaacaattctcagtgtttttgagaggaatattttggttttcTTCAGTAGAAAGGATTATACATGGGTCCCCTAAAAGGTCAAAAGCAATATAAATAATTTAAACAAATAATTCAAATTAATTCTTATACATATTTCTCTCCTAAGCTAAGTGCATCCTCTGAGGAGAGGGATTCTGTGGTGGTCTAAAGAATTTCCATGCTGTTTCAAATCTGATCTCACCTGGAATACTGCCTAGCTAATTCCCTAGATGAGACTATGGCAAAGACATGATAATACTTACATTTCCCAGGGACTGGGAAAGGCCTGGGAAAGCCTGGTGTTCC-TTTTGTAATCTGTGCAGCAAGGTGGAGCAGGCAGTTTGACCGTTCACAAGGATGTCTTGAGAAGTTAAAGGaaaactctcaaaaaaccaaaaaatttaaatctcttattatcagatttcaggtgggacagacagAAAGTATGTTTCCCATTCAATTAGTCAGGTTCCACAACC-----TGCTTTTTAAAATTGTGCATGCAAACATATTAATTTAAGAATTTCAAAAGACTTGCATTGTGACCATTGTT-TTTTAGGGTCACCTTGAGTCACATGGGTCCATTTACATAGGTATTTGCAAGACAGAGCTCcataaatccagcgggtgttgccaacagggtgccccttaaaggagagctcagttttggtaagcagtgtcccataattttagcaattccttttcaaaagtgaccaaggctggcatagtctatcaggtcgat-------gtgtgcc s panTro5.chr2A 1293789 1322 + 111504155 CTGCCTGTCTGTGCACAATG---GCCAGGTTAAAAGGAACAGCCAGGAAAACAGGAAAACAAAAG-TGTCCATGGGGGCAGTGCAgggaagaaaatataattgcttttctttccttcatgtgttcttagttttgacactttcc-tgaaaacaaaagtccaattaacaagaagaaaccagcagaagtttattaatgagtgttgtacgcatcatgttggggaggcct----------------------------------------------cggaagttttt-ctctgtc-----aagac----agttgcttggggactgtgctcacatagtatttttgcaaagaaccacaaatcctata------tagtgactaaacaaagaaaagagcattttcaggcttccaagaggtgggaaaatgtgggaggtgaatttatggcaagagtaaaatctgttcctagagcctctggtgccactgcctctgagcagataaacaagtgttgtgaggggc--cttttgaggtgggaaaggaggagaggaggccaggaagctctatctttgtacactgctgttccgccatcaggctagtggaagatgggacaaggtctgtggcattttcaccttcttcagctcaacaattctcagtgtttttgagaggaatattttggttttcTTCAGTAGAAAGGATTATACATGGGTCCCCTAAAAGGTCAAAAGCAATATAAATAATTTAAACAAATAATTCAAATGAATTCTTATACATATTTCTCTCCTAAGCTAAGTGCATCCTCTGAGGAGAGGAATTCTGTGGCGGTCTAAAGAATTTCCACGCTGCTTCAAATCTGATCTCACCTGGAATACTGCCTAGCTAATTCCCTGGATGAGACGACGGCAAAGACGTGATAATACTTACATTTCCAAGGGACTGGGAAAGGCCTGGGAAAGCCTGGCGTTCC-TTTCGTAATCTGTGCAGCAAGGTGGAGCAGGCAGTTTGACCGTTCACAAGGATGTCTTGAGAAGTTAAAGGaaaactctcaaaaaaccaaaaaatttaaatctcttattatcagatttcaggtgggacagacagAAAGTATGTTTCCCATTCAATTAGTCAGGTTCCACAACC-----TGCTTGTTAAAGTTGTGCA----AACATATTAATTTAAGAATTTCAAAAGACTTGCATTGTGACCATTGTT-TTTTAGGGCCACCTTGAGTCACATGGGTCCATTTACATAGGTGTTTGCAAGACAGAGCTCcataaatccagcgggtgttgccaacggggtgccccttgaaggagagctcagttttggtaagcagtgtcccataattttaacaattccttttcaaaagtgaccaaggctggcatagtctatcaggtcgat-------gtgtgcc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1254829 1317 + 114371477 CTGCCTGTCTGTGCACAATG---GCCAGGTTAAAAGGAACAGCCAGGAAAACAGGAAAACAAAAG-TGTCCATGGGGGCAGTGCAgggaagaaaatataattgcttttctttccttcatgtgttcttagttttgacactttcc-tgaaaacaaaagtccaattaacaagaagaaaccagcagaagtttattaatgagtgttgtacgcatcgtgttggggaggcct----------------------------------------------cggaagttttt-ctctgtc-----aagac----agttgcttggggactgtgctcacatagtatttttgcaaagaaccacaaatcctata------tagtgactaaacaaagaaaagagcattttcaggcttccaagaggtgggaaaatgtgggaggtgaatttatggcaagagtaaaatctgttcctagagcctctggtgccactgcctctgagcagataaacaagcgttgtgaggggc--cttttgaggtgggaaaggaggagaggaggccaggaagctctatctttgtacactgctgttccgccatcaggctagtggaagatgggacaaggtccgtggcattttcaccttcttcagctcaacaattctcagtgtttttgagaggaatattttggttttcTTCAGTAGAAAGGATTATACATGGGTCCCCTAAAAGGTCAAAAGCAATATAAATAATTTAAACAAATAATTCAAATGAATTCTTATACATATTTCTCTCCTAAGCTAAGTGCATCCTCTGAGGAGAGGAATTCTGTGGCGGTCTAAAGAATTTCCATGCTGCTTCAAATCCGATCTCACCTGGAATACTGCCTAGCTAATTCCCTGGATGAGACTACGGCAAAGACGTGATAATACTTACATTTCCAAGGGACTGGGAAAGGCCTG-----GCCTGGCGTTCC-TTTCGTAATCTGTGCAGCAAGGTGGAGCAGGCAGTTTGACCGTTCACAAGGATGTCTTGAGAAGTTAAAGGaaaactctcaaaaaaccaaaaaatttaaatctcttattatcagatttcaggtgggacagacagAAAGTATGTTTCCCATTCAGTTAGTCAGGTTCCACAACC-----TGCTTGTTAAAGTTGTGCA----AACATATTAATTTAAGAATTTCAAAAGACGTGCATTGTGACCATTGTT-TTTTAGGGCCACCTTGAGTCACATGGGTCCATTTACATAGGTGTTTGCAAGACAGAGCTCcataaatccagcgggtgttgccaacggggtgccccttgaaggagagctcagttttggtaagcagtgtcccataattttaacaattccttttcaaaagtgaccaaggctggcatagtctatcaggtcgat-------gtgtgcc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1280423 1371 + 1464242 CTGCCTGTCTGCGCACAATG---GCCAGGTTAAAAGGAACAGCCAGGAAAACAGGAAAACAAAAGCTGTCCATGGGGGCAGTGCAgggaagaaaatataattgcttttctttccttcatgtgttcttagttttgacactttcc-tgaaaacaaaagtccgattaacaagaagaaaccagcagaagtttattaatgagcattgtacGCATCGTGTTGGGGAGGCCTCTGACGCTTATTGATGAGTGTTGTACCCACCGTGTTGGGGAGGCCTCGGAAGTTTTT-CCCTGTC-----AAGAC----AGTTGCTTGGGGACTGTGCTCACATAGTATTTTTGCAAAGAACCACAAATCCTATA------TAGTGACTAAACAAAGAAAAGAGCATGTTCAGGCTTCCAAGAGGTGGGAAAATGTGGGAGGTGAATTTATGGGAAGAGTAAAATCTGTTCCTAGAGCCTCTGGTGCCACTGCCTCTGAGCAGATAAACAAGCGTTGTGAGGGGC--CTTTTGAGGTGGGAAAGGAGgagaggaggccaggaagctctatctttgtacactgctgttccgccatcaggctagtggaagatgggacaaggtccctggcattttcaccttcttcagctcaacaattctcagtgtttttgagaggaatattttggttttcTTCAGTAGAAAGGATTATACATGGGTCCCCTAAAAGGTCAAAAGCAATATAAATAATTTAAACAAATAATTCAAATTAATTCTTATACATATTTCTCTCCTAAGCTAAGTGCATCCTCTGAGGAGAGGAATTCTGTGGTGGTCTAAAGAATTTCCATGCTGTTTCAAATCTGATCTCACCTGGAATACTGCCTAGCTAATTCCCTGGATGAGACTACGGCAAAGACGTGATAATACTTACATTTCCAAGGGACTGGGAAAGGCCTGGGAAAGCCTGGCGTTCC-TTTTGTAATCTGTGCAGCAAGGTGGAGCAGGCAGTTTGACCGTTCACAAGGATGTCTTGAGAAATTAAAGGaaaactctcaaaaaaccaaaaaatttaaatctcttattatcagatttcaggtgggacagacagaaagtatgtttcccattcaattagtcgggttccacaaac-----tgctttttaaaattgtgcatgcaaacatattaatttaagaatttcaaaagacttgcatc-tggccattg-t-ttttagggtcaccttgagtcacatgggtccatttacataggtatttgcaagacagagctccataaatccagcgggtgttgccaacggGGTGCCCCTTAAAGGAGAGCTCAGTTTTGGTAAGCAGCGTCCCATAATTTTAGCAATTCCTTTTCAAAAGTGAGCAAGGCTGGCGTAGTCTATCAGGTCGAT-------GTGTGCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1011489 1328 + 81552678 CTGCCTGTCTGCACACAATG---GCCAGGTTAAAAGAAACAGCCAGGAAAACAGGAAAACAAAAGGTGTCCATGGGGACAGTGCAgggaagaaaatataattgcttttctttccttcatgtgttcttagttttaacactttcc-tgaaaacgaaagt-tgattaacaagaagaaaccagcagaagtttattaatgagtgttgtacgcatcgtgtgggggaggcct----------------------------------------------cggaagttttt-ctctctc-----aagacagttagttgcttggggactgtgcttacatagtattttcgcaaagaaccacaaatcctata------tagtgacaaaacaaagaaaagagcattttcagacctccaagaggtgggaaaatgtggaaggtgaatttatgggaagagtaaaatctgctcctatagcctctggtgccactgcctctgagcagataaatgagtgtcgtgaggggcctctcttgaggtgggaaaggaggagaggaggccaggaagctgtatctttgtacgctgctgttctgccgtcaagctaggggaagatggggcaaggtccctggcatgttcaccttcttcagctcaacaattctcagtgttttcgagaggaatattttggttttcTTCAGTAGAAAGGATTACACATGGGTCCCCTAAAAGGTCAAAAGCAATACAAATAATGTAAACAAATAATTCAAATTAATTCTTATACATACTTCTCTCCTAAGCTAAGTGCATCCTCTGAGGAGAGGAATTCTGTGGTGGTCTAAAGAATTTCCATGCTGTTTCAAATCTGATCTCACCTGGAATACTGCCTAGCTAATTCCCTGGATGAGACTATGGCAAAGACATGATAATACATACATTTCCAAGGGACTGGGAAAGGCCTGGGAAAGCCTGGCATTCC-TTTTGTAATCTGTGCAGCAAGGTGGAGCAGGCAGTTTGACCATTCACAAGGATGTCTTGAGAAGTTAAAGGAAAACTCTCAAAAaaacaaaaaatttaaatctcgtattatcagatttcaggtgggacagacagaaagtatgttttccattcaattagtcaggttccacaacc-----tgcttttttaaattgtgca----aacatattaatttaagaatttcaaaaggcttgcattgtgaccattgtt-ttttagggtcaccttgagtcacatgggtccatttacataggtatttgcaagacagagctccataaatccagctggtgtttccaacggggtgccccttaaaggagagctcagttttggtgagcagggtcccataattttagcaattccttttcaaaagtgaccaaggctggcatagtctatcaggtcgat-------gtgtgct i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1307686 1293 - 108792865 CCGCCTGTCTGAGCACAATG---GCCAGGTTAAAAGGAACAGCCAGGAAAACAGGA----AAAAGCTGTCCATGGGGAGAGTGCAgggaagaaaatataattgcttttctttcccccatgtgttcttagttctgacagtttcg-tataaacaaaagtctgattaagaagaa-aatacagcagagggttattaatgagtgctgtacccaccgtgtgggagaggcct----------------------------------------------caaagtttctctctctaactgggagaggcagttagttgcttggggactgtgctcacatagtattttcacaaagaatggcaaaccctgta------tagtgactaaataaagaatagagcattttcaggcttccaaaaag-gggaaaatgtgggaagtgaatttatgggaagagtaaaatctgctcctagagcctctggtgccactgtcgctgagcagataaacaggtgttgtgaggggcctctcctcaggtgggaaaggaggag-ggaggcggggaagctctgtcttcgtacactgctgtcccgccatcaggctagtcgaggacggggcaatgtccctagcattttcaccttcttcagctcaacagttctcggtattttcgagaggaatcttttggttttcTTCAGTAAAAAGGATTACACATGGGTTCCCTAAACGGTCAAAAACAAT-------------ACAAATAATTCAAATTAATTCTTACAAATATTTATCTCCTAAGCTAAATGCATCCTCTGAGGAGAGGAATTCCTTGGTGGTCTAAAGAATTTCCATGGTGTTTCAAATCTGATCTCAGCTGATATACTGCCTAGCCGATTCCCTGGATGAGACCACCACAAAGACATGATAAGGTTTACATCTCCAAGGAACTGGGAAC--------AAAGCCTGGAGTTCCTTTTTGTAATCTGTGCAGCAAGGTGGAGCAGGCAGTCTTCCCATTCACA-GGGTCTGTTGAGAAGTCAAACGAAAACTCTGAAAAA---CAAAAATTGAAGTCTCTTATTATCAGATTTCAGCTGG----GACAGAAAGAATGTCTCCCATTCAGTTAGTCTGGTTCCACAGCCTGCCTTGCTTTTTAAAATTTTGCATGCAAACATATTAATTTAAGAATTTTAGAAGACTTTGATTGTGGCCATTCTTGTTTTGGGGTCATCTTGAGTCA--------CATTTACATAGGTATTTTCAAGACAGAGCTCTGTAAGTCCAGCTGGTGTCTCCAATGGGGTGCTCCTTGAAGGAGAACT--GCTTTGCTGAGCAGTGTCCCATAATTTTAGCAATTCCTTTTCAAATGTGACCAAGGCTGGCATAATCTATCAGGTCGAC-------------- i calJac3.chr14 I 7 C 0 s saiBol1.JH378218 1162209 1312 - 7082604 CCGCCTGTCTGCACACAATGTCAGACAGGTTAAAAGGAACAGCCGGGAAAACAGGAAAACAAAAGCCAT-CATGGGGATAGTGCAgggaagaaaatataattgcttttctttcctccatgtgttctgagctctgacagtttcg-tacaaacagaagtctgattaagaag----atacagcagagggttattaatgagtgttgtgcccatcgtgtgggagaggcct----------------------------------------------cggaagttttc-ctctaactggg-gacttag--agttgcttggggactgtgctcacatagtattttcacaaagaacggcaaatcctatatagtggtagtggctaaacaaagaacagagcattttcaggcttccaacaggtgagagaatgtgggaagtgaatttatgggaaaagtacaatctgctcctagagcctctggtgccactgccgctgagcagataaacaggagttgtgaggggcctctcctcaggtgggaagaggggagaggaggctgggaagctctgtct--gcacactgctgtcccgccatcaggctagccgaggatagggcaatgtccctggcattttcaccttcttcagctcaacaattctcagtatttttgagaggaatcttttggttttcTTCAGTAGAAAGGATTACACATGGGTCCCCTAAACGGTCAAAAACAATACAAATAATTTAAACAAATAATTCAAATTAATT-TCATAAATATGTGTCTCCTAAGCTAAATGCATCCTCTGAGGAGAGGAATTCCTTGGTGGCCTAAAGAATTTCCATGCTGTTTCAAATCTGATCTCAGCTGATATACTGCCTAGCTGATTCCCTGGGTGAGACCACCACAAAGACATGATAAGATTTACATCTTCAAGGAACTGAGAAAATCCTGGGAAAGCCTGGAGTTCC-TTTTGTAATTTGTGCAGCAAGGTGGAGCAGGCAGTTTTACCATTCACAGGGGTTTCTTGAGAAGTTAAAGGGAAACTCTGAAAAA---CAAAAATTTAAATCTC---TTATCAGATTTCAGCTGG----GACAGAAAGTATGTCTCCCATTCAGTTAGTCTGCTTTCACAGCCCGCTTTGCTTTTTAAAACTGTGCATGCAAACACATTAATTTAAGAATTTCAAAAGACTTTTATTGTGGCCACTCTTGTTTTGGGGTCATCTTGAGTCA--------CATTTACATAGGTATTTTCAAGACAGAGCTCCATAAATCCAGCTGGTGTCTCAAATGAGGTGCTCCTTAAAGG---ACT--GTTTTGCTGAGCAGTGCCACATAATTTCAGCAATTCCTTTTCAAATGTGACCAAGGCTGGCATAATCTATCAGGTCGAC-------------- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1253512 1325 + 1864846 CTGCCTGTCTGCGCACAAAG---GCCAGGTTAAAAGGAACAGCCAGGAAAACGGGAAAACAAAAGCTGTCCATGGGGACAGTGCAgggaagaaaatacaattgcttttctttcctccatgtgttcttagttctgacagtttcattatcaacaaaagtctgattaagaagaa-aatacagcagagagttattaatgagtgttgtacccatcgtgtggaagaggtct----------------------------------------------tggaagttt---ctctaactgggagaggcagttagttgcttggggactgtgctcacatagtattttcacaaagaacggcaaatcctata------tagtgactaaacaaagaatagagcattttcaggcttccaacaggtgggaaaatgtggggagtgaatttatgggaagagtaaaatctgctcctagagcctctggtgccactgccactgggcagataagcaggtgttgtgaggggcctctcctcaggtgggaagggaggagaggaggctgggaagctctgtctttgtacactgctgtcctgccatcaggctagtcgaggatggggcaatgtccctgacattttcaccttcttcagctcaacaattctcagtattttctagaggaatcttttggttttcTTCAGCAGAAAGGATTACACATGGGTCCCCTAAACGGTCAAAAACAATACAAATAGTTTAAACAAATAATTCAAATTAATTCTTATAAATATTTATCTCCTAAGCTAAATGCATCCTCTGAGGAGAGGAATTCCTTGGTGGTGTAAAGAATCTCCATGCTGTTTCAAATCTGATCTCAGCTGATATACTGCCTAGCTGATTCCCTGAATGAGACCACCACAAATACATGATAAGATTTACATCTCCAAGGAACTGGGAAAATCCTGGGAAAGCCTGGAGTTCC-TTTTGTAATTTGTGCAGCAAGGTGGAGCAGGCAGTTTTACCATTCACAGGGGTCTCTTGAGAAGTTAAAGGGAAACTCTGAAAAA---CAAAAATTTAAATTTCTTATTGTCAGATTTCACCTGG----Gacagaaagtatgcctcccattcagttagtctggttccaaagcctgctttgctttttaaaattgtgcatgcaaacatattaatttaagaatttcaaaagactttcattgtggccattcttgttttggggtcatcttgagtca--------catttacataggtattttcaagacagagctccataaatccagctggtgtctccaatggggtgctccttaaaggagaact--gttttgctgagcaatgtcccataattttagcaattcattttcaagtgtgaccaaggCTGGCATAATCTGTCAGGTCGATAGGAGCA------- i cebCap1.NW_016107827v1 C 0 I 37 e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=20521.000000 s hg38.chr2_KI270774v1_alt 15539 17 + 223625 ggttgatgagtgtcact s panTro5.chr2A 1295111 17 + 111504155 ggttgatgagtgtcact i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1256146 17 + 114371477 ggttgatgagtgtcact i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1281794 17 + 1464242 GGTTGATGAGTGTCACT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1012817 17 + 81552678 ggttgatgagtgtcact i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1308979 12 - 108792865 -----AGGAACATCATT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1163521 12 - 7082604 -----AGGAGCATCATT i saiBol1.JH378218 C 0 C 0 e cebCap1.NW_016107827v1 1254837 37 + 1864846 I e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=1040580.000000 s hg38.chr2_KI270774v1_alt 15556 465 + 223625 cctcaggttgtcaccagtgagttgtgacttgtcctctGGGTGTTAGCAGTGAGTTGTGACTTGCTCCTGTGTGTTTCAGAAGCTCCCATCACCTTGGGGCAGCAGACTGACCATTTCTTTCTTTACCTTTCCAAAAGCAAGAGTCCCTAAAATGTTCTTCCAGTGAGGGATGCTCTGTGAGGCCACGTCGTGTCCTGGACAACATTGCTGAAACCTCTCTAATCCCCTAGAGCACCCATGAGGGTCAGAGCTGCAATGGACTCTTCTCTTCAGGGCAAAAGAACTCACTGTCATTCACCTTTTAGTTTGGAGCTAATGGAAATTGGTCCCAAATGAAATGACAGGTCCTAATTACAAACACTAGAAAGCAGCTGCAATTTTAAAAGCATGCTGTGTAAATTTGGGCCTAAAGAAGTGAAACCACT----GGTGCTAGACTGGAATACTGTGAAGCAGACCTTCTGCTGC s panTro5.chr2A 1295128 465 + 111504155 cctcaggttgtcaccagtgagttgtgacttgtcctctGGGTGTTAGCAGTGAGTTGTGACTTGCTTCCGTGTGTTTCAGAAGCTCCCATCACCTTGGGGCAGCAGATTGACCATTTCTTTATTTACCTTTCCAAAAGCAAGAGTCCCTAAAATGTTATTCCAGTGAGGGATGCTCTGTGAGGCCACGTCGTGTCCTGGACAACATTGCTGAAACCTCTCTAATCCCCTAGAGCACCCATGTGGGTCAGAGCTGCAATGGACTCTTCTCTTCAGGGCAAAAGAACTCACTGTCATTCACCTTTTAGTTTAGAGCTAATGGAAATTGGTCCCAAATGAAATGACAGGTCCTAATTACAAACACTAGGAAGCAGCTGCAATTTTAAAAGCATGCTGTGTAAATTTGGGCCTAAAGAAGTGAAACCACT----GGTGCTAGACTGGAATACTGTGAAGCAGACCTTCTGCTGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1256163 465 + 114371477 cctcaggttgtcaccagtgagttgtgacttgtcctctGGGTGTTAGCAGTGAGTTGTGACTTGCTTCCATGTGTTTCAGAAGCTCCCATCACCTTGGGGCAGCAGATTGACCATTTCTTTATTTACCTTTCCAAAAGCAAGAGTCCCTAAAATGTTATTCCAGTGAGGGATGCTCTGTGAGGCCACGTCGTGTCCTGGACAACATTGCTGAAACCTCTCTAATCCCCTAGAGCACCCATGTGGGTCAGAGCTGCAATGGACTCTTCTCTTCAGGGCAAAAGAACTCACTGTCATTCACCTTTTAGTTTGGAGCTAATGGAAATTGGTCCCAAATGAAATGACAGGTCCTAATTACAAACACTAGGAAGCAGCTGCAATTTTAAAAGCATGCTGTGTAAATTTGGGCCTAAAGAAGTGAAACCACT----GGTGCTAGACTGGAATACTGTGAAGCAGACCTTCTGCTGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1281811 465 + 1464242 CCTCAGGTCGTCACCAgtgagttgtgacttgtcctctgggtgttagcagtgagttgtgacttgCTCCCCTGTGTTTCAGAAGCTCCCATCACATTGGGGCGGCAGATTGACCATTTCTTTATTTACCTTTCCAAAAGCAAGAGTCCCTAAAATGTTCTTCCCGTGAGGGATGCTCTGTGAGGCCATGTCGTGTCCTGGACAACACTGCTGAAACCTCTCTAATCCCCTAGAGCACCCATGAGGGTCAGAGCTGCAATGGACTCTTCTCTTCAGGGCAAAAGAACTCACTGTCATTCACCTTTTAGTTTGGAGCTAATGGAAATTGGTCCCAAATGAAATGACAAGTCCTAATTACAAACACTAGGAAGCAGCTGCAATTTTAAAAGCATGCTGTGTAAATTTGGGCCTAAAGAAGTGAAACCACT----GGTGCTAGACTGGAATACTGTGAAGCAGACCTTCTGCTGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1012834 465 + 81552678 cctcaggttgtcaccagtgagttgTAACTTGTCCTCAGGGTGTTAGCAGTGACTTGCGACTTGCTCCCGTGTGTTTCAGAAGCTCCCATCACCTTGGGGCAGCAGAGTGACCATTTCTTTATTTACCTTTCCAAAAGCAAGAGTCCCTAAAATGTTCTTCCAGTGAGGGATGCTCTGTGAGGCCATGTTGTGTCCTGGACAACGTTCCTGAAACCTCTCCAATCCCCTAGAGCACCCACGTGGGTCAGAGCTGCAATTGTCTCTTCTCTTCAGGGCAAAAGAACTCACTGTCATTCACCTTTTAGTTTGGAGCTAACAGAAATTGGTCCCAAATGAAATGAGAGGTCCTAATTACAAACACTAGGAAGCAGTTGCAATTTTAAAAGCATACTGTGTAAATTTGGGCCCAAAGAAGTGAAACCACT----GGTGCTAGACTGGAATACTGTGAACCAGACCTTCTGCTGC i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1308991 464 - 108792865 CCTTAGGCTGTCACCAGGGAGTTGTGACTTTTCCTCAGGGTGTCACCAGGGAGTTGTGACTTGCATCCATATGTTTCAGAAGCTCCCATCACCTTGGGGCAGCAGAGTGACCAGTTCTTTACTTACCTTTCCGAAAGCAAGAGTCCCTGAAATGTTCTTCCAGCGTGGGATGCTCTGCAAGACCATATTGTGTCCTGGACAACATTCCCAAAACCTTTCTAATCCCCTAGAGCACCCATGTGGGCCAGAGCTGCAGCTCTCTCTTCTCTTCAGGG-AAGGGAACTCACTGTCATTCAGGTTTCAGTTTGGAATTAACAGAAATTGGTCCCAAATGAAAAGACAGGTCCTAATTACAAACACTAGGAAGCAGCTGCAATTTTAAAAACGTGCTGTGTAATTTTGGGCCAAAAGAAGTGAAACCACT----GGTACCAGACGGGAATACTGTAAACCAGACTGTCTGCTGT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1163533 466 - 7082604 CCTTAGGTTGTCACCTGGGAGTTGTGACTTGTCCTCAGGGTGTCACCAGGGAGTTATGACTTGCATCCCTATGTTTCAGAAGCTCCCATCACCTTGGGGAAGCAGAGTGACCAGTTCTTTACTTACATTTCCAAAAGCAAGAGTCCCTAAAATGTTCTTCCCGCATGGGATGCTCTGTGAGACCACGTTGTGTCCTGGACAACATTCCCAAAACCTTTCTAATCCCCTAGAGCACCCATGTGGGCCAGAGCTGCAGCTGTCTCTTCTCTTCAGGG-AAGGGAACTCACTGTCATTCAGGTTTCAGTTTGGAATTAACAGAAATTGGTCCCAAATGAAAAGACCTGTCCTTATTACAAATGCTAGGAAGCAGCTGCAACTTTAAAAACACGCTGTGTAATTTT--GCCAAAAGAAGTAAAACCACTGGTAGGTACCAGACTGGAATACTGTGAACCAGACCGTCTGCTGT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1254874 464 + 1864846 CCTCAGGGTGTCACTAGGGAGTTATGACTTGCCCTCAGGGTATCACCAGGGAGTTATGACTTGCATTCATATGTTTCAGAAGCTCCCATCATCTTGGGGAAGCAGAGTGACCAGTTCTTTACTTACCTTTCCAAAAGCAAGGGTCCCTAAAATGTTCTTCCAGTGTGGGATGCTCTGTGAGACCATGTTGTGTCCTGGACAACATTCTCAAAACCTTTCTAATCCCCTAGAGCACCCATGTGGGCCTGAGCTGCAGCTGTCTCTTCCCTTCAGGG-AAGGGAACTCACTGTCATTCAGGTTTCAGTTTGAAATTAACAGAAATTGGTCCCAAATGAAAAGACAGGTCCTAATTACAAACACTAGGAAACAGCTGCAATTTTAAAAACATGCTATGTAATTTTGGGCCAAAAGAAGTGAAACCACT----GGTACCAGACTGGAATACTGTGAACCAGACCGTCTGCTGT i cebCap1.NW_016107827v1 I 37 C 0 e otoGar3.GL873658 888114 1 + 5252280 I e dasNov3.JH576208 1566289 721 + 4416731 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=32498.000000 s hg38.chr2_KI270774v1_alt 16021 18 + 223625 GAGCTAAGTCCAACTGAC---- s panTro5.chr2A 1295593 18 + 111504155 GAGCTAAGTCCAACTGAC---- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1256628 18 + 114371477 GAGCTAAGTCCAACTGAC---- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1282276 18 + 1464242 GAGCTAAGTCCAACTGAC---- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1013299 18 + 81552678 GAGCTGAGTCCAACCGAC---- i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1309455 17 - 108792865 GAGCTGAGTCC-ATTGGC---- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1163999 17 - 7082604 GAGCTGAGTCC-ATTGAC---- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1255338 17 + 1864846 GAGCTGAGTCC-ATTGAC---- i cebCap1.NW_016107827v1 C 0 C 0 s dasNov3.JH576208 1567010 22 + 4416731 gagccaaatctgctttccTTAC i dasNov3.JH576208 I 721 C 0 e otoGar3.GL873658 888114 1 + 5252280 I e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=5739.000000 s hg38.chr2_KI270774v1_alt 16039 3 + 223625 TTT s panTro5.chr2A 1295611 3 + 111504155 TTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1256646 3 + 114371477 TTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1282294 3 + 1464242 TTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1013317 3 + 81552678 TTT i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1309472 3 - 108792865 TTA i calJac3.chr14 C 0 I 261 s saiBol1.JH378218 1164016 3 - 7082604 TTA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1255355 3 + 1864846 TTA i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 888115 3 + 5252280 tct i otoGar3.GL873658 I 1 C 0 s dasNov3.JH576208 1567032 3 + 4416731 TTG i dasNov3.JH576208 C 0 C 0 e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=658967.000000 s hg38.chr2_KI270774v1_alt 16042 262 + 223625 GTCTTAATAACTTTACAACTATCC-G-G----GGGTGGGGAATGTAGGAAATAA------C------------TTCTGGGAATGACTTGGAACCAGGATCCCTTGA-------CTT------TATTC---TTTCCTTGCCTG-GTAATCTTGACTGGTAACTTGAGTGAGACAAGCCTTATGAAGTTTGTGGGTCTGAGAGTCCCACCCAATGGAATCCCAGTTCTTGACCTTGTCTGAGGCAC--ACTTTGGGGGATCCTTGTGTGGCCTTGAATGCTCTCAGCATTGCACTTGCAGGCTGTCA s panTro5.chr2A 1295614 262 + 111504155 GTCTTAATAACTTTACAACTATCC-G-G----GGGTGGGGAATGTAGGAAATAA------C------------TTCTGGGAATGACTTGGAACCAGGATCCCTTGA-------CTT------TATTC---TTTCCTTGCCTG-GTAATCTTGACTGGTAACTTGAGTGAGACAAGCCTTATGAAGTTTGTGGGTCTGAGAGTCCCACCCAATGGAATCCCAGTTCTTGACCTTGTCTGAGGCAC--ACTTTGGGGGATCCTTGTGTGGCCTTGAATGCTCTCAGCATTGCACTTGCAGGCTGTCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1256649 262 + 114371477 GTCTTAATAACTTTACAACTATCC-G-G----GGGTGGGGAATGTAGGAAATAA------C------------TTCTGGGAATGACTTGGAACCAGGATCCCTTGA-------CTT------TATTC---TTTCCTTGCCTG-GTAATCTTGACTGGTAACTTGAGTGAGACAAGCCTTATGAAGTTTGTGGGTCTGAGAGTCCCACCCAATGGAATCCCAGTTCTTGACCTTGTCTGAGGCAC--ACTTTGGGGGATCCTTGTGTGGCCTTGAATGCTCTCAGCATTGCACTTGCAGGCTGTCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1282297 262 + 1464242 GTCTTAATAACTTTACAACTATCC-A-G----GGGTGGGGAATGTAGGAAATAA------C------------TTCTGGGAATGACTTGGAACCAGGATCCCTTGA-------CTT------TATTC---TTTCCTTGCCTG-GTAATCTTGACTGGTAACTTGAGTGAGACAAGCCTTATGAAGTTTGTGGGTCTGAGAGTCCCACCCAATGGAATCCCAGTTCTTGACCTTGTCTGAGGCAC--ACTTTGGGGGATCCTTGTGTGGCCTTGAATGCTCTCAGCATTGCACTTGCAGGCTGTCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1013320 262 + 81552678 GTCTTAATAACTTTACAACTATCC-G-G----GGGTGGGGAATGTAGGAAATAA------C------------TTCTGGGAATGACTTGGAACTGAGATCCGTTGA-------CTT------TATTC---TTTCCTTGCCTG-GTAATCTTGATTGGTAACTTGAGTGAGACAAGCCTCGTGAAGTTTGTGGGTCTGAGAGTCCCACCCAATGGAATCCCAGTTCTTGACCTTGTCTGAGGCAC--ACTTCGGAGGATCCTTGTGTGGCCTTGAATGTTCTCAGTATTCCACTTGCAGGCTGTCA i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1309736 261 - 108792865 gtCTTAATAACTTCACAACTATCT-G-G----GGGTGGGGAATGTGGGAAATAA------C------------TTCTGGGAATGACTTGGAACCAGGGTCC-TTGA-------CTT------TATTC---CTTCCTTGCCTG-GTGGTCTTTATTGCTAAGTTGAGTAAGATGAGCCTTATGAAGCTTGTGCGTCTGAGAGCCCCACCCACTGGAATTCTAGTTCCTGGCCTTGTCTGAGGCAC--ACTTTGGAGGATCTCCGTGCGGCCTTGCATGCTCTCAGCGTTGCACGTTCAGGCTGTCG i calJac3.chr14 I 261 C 0 s saiBol1.JH378218 1164019 274 - 7082604 GTCTTAATAACTTCACAACTATGC-G-G----GGGTGGGCAATGTGGGAAATAA------CAAAGAACGGCAAATCTGGGAATGACTTGGAACCAGGGTCCGTTGA-------CTT------TATTC---TTTCCTTGCCTG-GTGGTCTTGATTGCTAAGTTGAGTAAGACAAGCCTTGTGAAGCTTGTGGGTCTCAGAGTCCCACCCACTGCAATTCTAGTTCTTGACCTTGCCTGAGGCAC--ACTTTGGAGGATCTTTGTGTGGCCTTGAATGCTCTCAGCATTCTACCTTTGGGCTGTCA i saiBol1.JH378218 C 0 M 3088 s cebCap1.NW_016107827v1 1255358 266 + 1864846 GTCGTAATAACTTCACAGCTATCTGG-G----GGGTGGGGAATGTGGGAAACAA------C------------TTCTGGGAATGACTTGGAACCAGGATCTGTTGA-------CTT------TATTCAAGACCACTTGCTTG-GTGGTCTTGATTGCTAAGTTGAGTAAGACAAGCCTTATGAAGCTTGTGGGTCTGAGAGTCCCACCCACTGGAATTCTAGTTCTTGACCTTGTCTGAGGCAC--ACTTTGGAGGATCTTTGTGTGTCCTTGAATGCTCTCAGCATTCCACTTTTGGGCTGTCA i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 888118 197 + 5252280 gtctcAATAACTTTGTGACTCTTT-GTG----GGAGGGGGCGAATAGGAAGTGG------C------------TTCTATGGACGGCTCAGCCCC-TGATCCCTCGG-------CCTGTGGGGTGTTC---TTTGCCAGGCCA-ATGGCC-------------AGACTGAGACAAGCCTTAGGAGCTCTG--------------------------------------------------GGCA---ACTCTGGAGGACTC------AGCCTGAGGTGCCCTCCACACCCCACTTAGAGG-GGCCA i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1567035 273 + 4416731 CTCTTAAT---TTCTCAACTATTT-G-GAAGAAGGAAGGGAATATAGGAAATAGAATGGCT------------TTCCGGCAACAACTTGGAACAGTGATTCATTGAGCTCTGGCTT------TATTT---GTTATTTGCCTGTGGGATCTTGAGCAGTTGCTTAAATAAGAGAGGCACTGTAAAATTAGCAAGTCTGAGAATTCTACCAGTTGGAATTCCAGTTTGGAAAATTCTCTGAGTCACAAATTTTGGATGAT------GCAGCCTGATGTGCTCTTAGCACTCCACTTTGATGCTGTGA i dasNov3.JH576208 C 0 C 0 e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=478255.000000 s hg38.chr2_KI270774v1_alt 16304 254 + 223625 GTAGCTCACTTGATAGTGTGTGGCC---TCTACCTCAGCCTGGCATCTCTCTGGCTGTGAAGTCATCGTTTTCTTATTTTAAGGAGTAAAGGTATGAT---AAGCCTGCCAG-------ATAATCAGATG------TCTCAATGGTGCTCAAGAGCTTTAAGATCTCTCATTGCATGTTCAGAAAAATGCACACTCCT--GGG-CAGGGTACCAGGAAGGCCTGAAGTTC-ATGCC--------CTGGCGCGGTTTCCAGCTTC----ACGACATAACCCAG-CCTGGTG s panTro5.chr2A 1295876 253 + 111504155 GTAGCTCACTTGATGGTGTGTGGCC---TGTACCTCAGCCTGGCATCTCTCTGGCTGTGAAGTCATCGTTTTCTTATTTTAAGGAGTAAAGGTATGAT---AAGTCTGCC-G-------ATAATCAGATG------TCTCAGTGGTGCTCAAGAGCTTTAAGATCTCTCATTGCATGTTCAGAAAAATGCACACTCCT--GGG-CAGGGTACCAGGAAGACCTGAAGTTC-ATGCC--------CTGGCGTGGTTTCCAGCTTC----ACGACATAACCCAG-CCTGGTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1256911 254 + 114371477 GTAGCTCACTTGATGGTGTGTGGCC---TGTACCTCAGCCTGGCATCTCTCTGGCTGTGAAGTCATCGTTTTCTTATTTTAAGGAGTAAAGGTATGAT---AAGTCTGCCAG-------ATAATCAGATG------TCTCAGTGGTGCTCAAGAGCTTTAAGATCTCTCATTGCATGTTCAGAAAAATGCACACTCCT--GGG-CAGGGTACCAGGAAGACCTGAAGTTC-ATGCC--------CTGGCGTGGTTTCCAGCTTC----ACGACATAACCCAG-CCTGGTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1282559 254 + 1464242 GTAGCTCACTTGATAGTGTGTGGCC---TCTACCTCAGCCTGGCATCTCTCTGGCTGTGAAGTCATCGTTTTCTTATTTTAAGGAGTAAAGGTATGAT---AAGCCTGCCAG-------ATAATCAGATG------TCTCAATGGTGCTCAAGAGCTTTAAGATCTCTCATTGCATGTTCAGAAAAATGCACACTCCT--GGG-CAGGGTACCAGGAAGGCCTGAAGTTC-ATGCC--------CTGGCGCGGTTTCCAGCTTC----ATGACATAACCCAG-CCTGGTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1013582 254 + 81552678 GTAGCTCACTTGATAGTGTGTGGCC---ACTACCTCAGCCTGGCATCTCTCTGGCTGTGAAGTCATCATTTTCTTATTTTAAAGAGTAAAGGTATGAT---AAGTCTGCCAG-------ATAATCAGCTG------TCTCAATGATGCTCAAGAGCTTTCAAATCTCTCATTGCATGTTCAGAAAAATGCACACTCCT--GGG-CAAGGTACCAGGAAGGCCTGAAGTTC-ATGCC--------CTGGCGCGGTTTCCAGCTTC----ACGGCATAACCCAG-CCTGGTG i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1309997 254 - 108792865 GTGGCTCAGTGGATGGTGTGTGGCC---TCGGCCTCAGCCTGGCATCTCTGTGGCTGTGAAGTCATCATTTTCCTACTTTAAGGAGTAAATGTTTGAT---AAGTCTGCCAG-------ATACTCAGCTG------TCTCAGTGGTGCTCAAGAACTTTAGAGTCTCTCATTGCATGCTCGGAACAATGCACACTCCT--GGG-TGGAGTGCCAGGAAGGCCTGCAGTTC-ATGCC--------CTAGCGGGGTTTCCAGCTTC----ATGACATAACTCAG-CCTGGGG i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1255624 240 + 1864846 GTGGCTCGGTTGATGGTGTGTGACC---TCAGCCTCAGCCTGGCATCTCTCTGGCTGTAAAGTCATCATTTTCTTACTTTAAGGAGTCAATGTTTGAT---AAGTCTGCCAG-------ATACTCAGCTG------TCTCAATGGTGCTCAAGAACTTTAAAGTCTCTCATTGCATGCTCGGAACAATGAACACTCCT--GGG-CAAAGTGCCAGGAAGGCCTGCAGTTC-ATGCC--------CTACCGGGGTTTCCAGCTTC----ATGGCAT--------------- i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 888315 246 + 5252280 GCAACTGGGATGATGGCATTTATCC---TCTACCTCAGCAAGG-GTCTCTCTGGCTGGGCAGCC-TGATGGTCTTAGGTTAAGGCCTGAACATGTGGTGAAGAGTCCACCAG-------ATGGGCCATTGCCAGCATCTCA--GGGGCTCACCACCTGTGATGTCTCCTGTTGAGGGTCCTGTAAATGGG-----CCT--GGATCAGGGCACCACGTGGGCATGCAGCCCTGTTCG--------CTTGT---GTTTCCAACCTC----TGGGCAGGACCCAG-------- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1567308 264 + 4416731 ATAGTTCAGCTCATAAAATTTGGCACTGTATACCTCAGCCTGGGAACTCTCTGACTG--AAGCAATCATTTTCACGTTCTGAGA--TAAATATATGAA---GAGTCTACCAAATGGAATATAACCAGCTG------TCTCATCTGTGCTCAAAAACTTTA---TCTCT-GTTGCAAGTTCAGTAAAATATGCACTCCTCAGAG-TGGGATATAAAGGA------AAGTGC-ATCCCTCATTGGTCTGCCTATATTTCCAGTTTTCTCATCAGCTAAACCCAGCCCTGAT- i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=26770.000000 s hg38.chr2_KI270774v1_alt 16558 29 + 223625 CCTGCTTGGCTGCCTCTTCCCTCCAGCTG s panTro5.chr2A 1296129 29 + 111504155 CCTGCGCGGCTGCCTCTTCCCTCCAGCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1257165 29 + 114371477 CCTGCGCGGCTGCCTCTTCCCTCCAGCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1282813 29 + 1464242 CCTGCTCGGCTGCCTCTTCCCTCCAGCTG i gorGor5.CYUI01015607v1 C 0 I 279 s nomLeu3.chr19 1013836 29 + 81552678 CCTGCTCGGCTGCCTCTTCCCTCCAGCTG i nomLeu3.chr19 C 0 C 0 s dasNov3.JH576208 1567572 12 + 4416731 -----------------CCCCCTCTGCTG i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1255864 0 + 1864846 C e otoGar3.GL873658 888561 0 + 5252280 C e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=6502.000000 s hg38.chr2_KI270774v1_alt 16587 8 + 223625 TTCTTCAC s panTro5.chr2A 1296158 8 + 111504155 TTCTTCAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1257194 8 + 114371477 TTCTTCAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1283121 8 + 1464242 TTCTTTAT i gorGor5.CYUI01015607v1 I 279 C 0 s nomLeu3.chr19 1013865 8 + 81552678 TTCTTCAC i nomLeu3.chr19 C 0 I 224 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1255864 0 + 1864846 C e otoGar3.GL873658 888561 0 + 5252280 C e dasNov3.JH576208 1567584 0 + 4416731 C e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=1910.000000 s hg38.chr2_KI270774v1_alt 16595 2 + 223625 GA s panTro5.chr2A 1296166 2 + 111504155 GA i panTro5.chr2A C 0 I 224 s panPan2.chr2A 1257202 2 + 114371477 GA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1283129 2 + 1464242 GA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1014097 2 + 81552678 GA i nomLeu3.chr19 I 224 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1255864 0 + 1864846 C e otoGar3.GL873658 888561 0 + 5252280 C e dasNov3.JH576208 1567584 0 + 4416731 C e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=4365.000000 s hg38.chr2_KI270774v1_alt 16597 3 + 223625 CAC s panTro5.chr2A 1296392 3 + 111504155 CAC i panTro5.chr2A I 224 C 0 s panPan2.chr2A 1257204 3 + 114371477 CAC i panPan2.chr2A C 0 I 112 s gorGor5.CYUI01015607v1 1283131 3 + 1464242 CAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1014099 3 + 81552678 CAC i nomLeu3.chr19 C 0 C 0 s dasNov3.JH576208 1567584 3 + 4416731 CAC i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1255864 0 + 1864846 C e otoGar3.GL873658 888561 0 + 5252280 C e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=481689.000000 s hg38.chr2_KI270774v1_alt 16600 321 + 223625 AACCCAGCC-TGGTGCCTGCTCGGCTGCCTCTTCCCTCCAGCTGTTCCAAGGACATGCGCTGCAACGTCTCATCTCCAGGCC-TTTGTTGGGTTCCAGTTCTCAGTTTGTCTT-CCTGTGAAGTTGTGTCCTTCCTTTCTACATTCATTTGGTAAACATATGTCAAAAATTTACTATGTCCAAAGGTCTCTCTGCTAGTGAGTGAAAAGTTATCCCTGTTAATTTTGAGACATTAAGATGAATTGGCCATTCAGAAATTAGGGGAAAATAGAAATACAAACAGAACTTACTATAATGTTACCTGATGTGTGTTGTAAAAGTGCA s panTro5.chr2A 1296395 321 + 111504155 AACCCAGCC-TGGTGCCTGCTCGGCTGCCTCTTCCCTCCAGCTGTTCCCAGGACATGCGCTGCAACGTCTCATCTCCAGGCC-TTTGTTGGGTTCCAGTTCTCGGCTTGTCTT-CCTGTGAAGTTGTGTCCTTCCTTTCTACATTCATTTGGTAAACATATGTCAAAAATTTACTATGTCCAAAGGTCTCTCTGCTAGTGAGTGAAAAGTTATCCCTGTTAATTTTGAGACATTAAGATGAATTGGCCATTCAGAAATTAGGAGAAAATAGAAATACAAACAGAACTTACTATAATGTTACCTGATGTGTGTTGTAAAAGTGCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1257319 321 + 114371477 AACCCAGCC-TGGTGCCTGCTCGGCTGCCTCTTCCCTCCAGCTGTTCCCAGGACATGCGCTGCAACGTCTCATCTCCAGGCC-TTTGTTGGGTTCCAGTTCTCGGCTTGTCTT-CCTGTGAAGTTGTGTCCTTCCTTTCTACATTCATTTGGTAAACATATGTCAAAAATTTACTATGTCCAAAGGTCTCTCTGCTAGTGAGTGAAAAGTTATCCCTGTTAATTTTGAGACATTAAGATGAATTGGCCATTCAGAAATTAGGAGAAAATAGAAATACAAACAGAACTTACTATAATGTTACCTGATGTGTGTTGTAAAAGTGCA i panPan2.chr2A I 112 C 0 s gorGor5.CYUI01015607v1 1283134 321 + 1464242 AACCCAGCC-TGGTGCCTGCTCGGCTGCCTCTTCCCTCCAGCTGTTCCCAGGACATGCGCTGCAACGTCTCATCTCCAGGCC-TTTGTTGGGTTCCAGTTCTCAGCTTGTCTT-CCTGTGAAGTTGTGTCCTTCCTTTCTACATTCGTTTGGTAAACATATGTCAAAAATTTACTATGTCCAAAGGTCTCTCTGCTAGTGAGTGAAAAGTTATCCCTGTTAATTTTGAGACATTAAGATGAATTGGCCATTCAGAAATTAGGGGAAAATAGAAATACAAACAGAACTTACTATAATGTTACCTGATGTGTGTTGTAAAAGTGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1014102 321 + 81552678 AACCCAGCC-TGGTGCCTGCTCGGCTGCCTCTTCCCTCCAGCTGTTCCCAGGACATGCGCTGCAACGTCTCATCTCCAGGCC-TTTGTTGGGTTCTAGTTCTCAGCTTGTCTT-CCTGTGAAGTTGTGTCCTTCCTTTCTACATTCATTTGGTAAACATATGTCAAAAATTTACTATGTCCAGAGGTCTCTCTGCTAGTGAGTGAAAAGTTATCCCTGTTAATTTTGAGACATTAAGATGAATTGGCCATTCAGAAATTAGGGGAAAATAGAAATACAAACAGAACTTACTATAATGTTACCTGATGTGTGTTGTAAAAGTGCA i nomLeu3.chr19 C 0 C 0 s cebCap1.NW_016107827v1 1255864 311 + 1864846 AACTCAGCC-TGGGGCCTGCTCAGCTGCTGCTTCCCTCCAGCTGTTCCCAGGCCATGCACTGCAATGTCTCATCCCCAGGCC-TTT----GATTCCAGTTCTCAGCTTGTCTT-CCTGTGAAGTTGTGTCCTTCCTTTCTACATACATTTGGAAAATATTTATCAAACATTTGCTATGTCCAAAGGTCTCTCTGCTAGTGAGT-AAAAGTTATCCCTGTAAATTTTGAGACATTAAGATGAATTGGCTATTCAGAAATTAGGGGAAGAGAGAAATACAAACAGAACTTATTATAAT----CTTGATGT-TGTTGTAAAGGTGCA i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 888561 268 + 5252280 -----AGCC-CAGCGGTTCCCAGGCC---------------CTGATCCTAGGTCTTGTGA------GTCCCATCCCTAGGTC-TTGGCTGTGTTCCATGTGTCAGCCTGACTG--TGGTGAAGTCAAGTCCTTCCTCT-----GACTTTTGGAAAACGTATA--GAACATCCATTGCATCCAG-GGTGTCTC--------------AGGTCCTCCCTGCAGATTTAG-GACATTGAGACGAGTTTGACATTCAGGAATCAGGA-AGGAGACAAACGCACATGGGATGTGTCACAGC-TCAGGTGACGTGTGGCGTGAAC-TGCA i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1567587 286 + 4416731 AGTCCAGCCACAATGCATAATCC------------------CCATTCCCAGATCATGACTTGCAAGTTCTTTTTTTTATTTCATTTGTTTTATTCCATTTCTCAACTTATCTTCCCTTTGAAGTTGTAGCTGTCCTTTCAATATTTGTTTGGAAAATACTTGCCAAACAGTTA----------GGGACTCTTCACTAGTG----CAAGTGTCCTTCTGTTAATAGTG-GACATAAAGACAATTAGACTGTTTAAG-----GGGGGAGATAAAAGTACATACAAAACTTACTGTAATATTGCAGGATATGGGCAATGAAAGTATG i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=12924.000000 s hg38.chr2_KI270774v1_alt 16921 9 + 223625 AGGACAagg s panTro5.chr2A 1296716 9 + 111504155 AGGACAagg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1257640 9 + 114371477 AGGACAagg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1283455 9 + 1464242 AGGACAagg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1014423 9 + 81552678 AGGACAagg i nomLeu3.chr19 C 0 C 0 s cebCap1.NW_016107827v1 1256175 9 + 1864846 AGGTCATAG i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 888829 9 + 5252280 GGGACAGAG i otoGar3.GL873658 C 0 I 306 e saiBol1.JH378218 1164293 3088 - 7082604 M e dasNov3.JH576208 1567873 0 + 4416731 C e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=401296.000000 s hg38.chr2_KI270774v1_alt 16930 332 + 223625 acgaggtggattcacaccttaattctatcagacattcaaagaagaatgggtatcaattttactgaaactattcc-aaaagatagagaaagacggaatcctccctaaaccattatgtgaagccagtatcaccctaatgccaaaaccaggaaaagac--agaacaaaaaaagaaaactacaga-caatatatctgattaacatatgtgtaaaaatcttcaagaaaattatgctaataatttgctaattaaattcaacataatatgccaattaaatccaacagcatatcaaatagataatacaccataatcaaatgggtttcatactgaggatgcaggg s panTro5.chr2A 1296725 332 + 111504155 accaggtggattcacaccttaattctatcagacattcaaagaagaatgggtatcaattttactgaaactattcc-aaaagatagagaaagatggaatcctccctaaaccattatgtgaagccagtatcaccctaatgccaaaaccaggaaaagac--agaacaaaaaaagaaaactacaga-caatatatctgattaacatatgtgtaaaaatcttcaagaaaattatgctaataatttgctaattaaattcaacataatatgccaattaaatccaacagcatatcaaatagataatacaccataatcaaatgggtttcatactgaggatgcaggg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1257649 332 + 114371477 accaggtggattcacaccttaattctatcagacattcaaagaagaatgggtatcaattttactgaaactattcc-aaaagatagagaaagatggaatcctccctaaaccattatgtgaagccagtatcaccctaatgccaaaaccaggaaaagac--agaacaaaaaaagaaaactacaga-caatatatctgattaacatatgtgtaaaaatcttcaagaaaattatgctaataatttgctaattaaattcaacataatatgccaattaaatccaacagcatatcaaatagataatacaccataatcaaatgggtttcatactgaggatgcaggg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1283464 332 + 1464242 accaggtggattcacaccttaattctatcagacattcaaagaagaatgggtatcaattttactgaaactattcc-aaaagatagagaaagacggaatcctccctaaaccattatgtgaagccagtatcaccctaatgccaaaaccaggaaaagac--agaacaaaaaaagaaaacagcaga-caatatatctgattaacatatgtgcaaaaatcttcaagaaaattatgctaataatttgctaattaaattcaacgtaatatgccaattaaatccaacagcatatcaaatagataatacaccataatcaaatgggtttcatactgaggatgcaggg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1014432 333 + 81552678 accaggtggattcacaccttaattctatcagacattcaaagaagaatgggtatcaattttactgaaactattcc-aaaagatagagaaagacagaatcctccgtaaaccattatgtgaagccagtatcaccctaatgccaaaaccaggaaaagac--agaacaaaaaaagaaaactgcagaccaatatatctgattaacatatgtgcaaaaatcttcaagaaaattatgctaataatttactaattaaattcaacacaatatgccaattaaatccaacagcatatcaaatagataatacaccataatcaaatgggtttcatactgaggatgcaggg i nomLeu3.chr19 C 0 C 0 s cebCap1.NW_016107827v1 1256184 303 + 1864846 AGGAAGGggattcacaccttaattctatcagactttcaaagaagaatgggtgacaattttactgaaaccattccaaaaagatagagaaagaaggaattcactccaaatcattgtgcgaaaccagtatcaccctaataccaaaaccaggaaaagacggggaaaaaaaaaagaaaactacagaccaatatctctgatgaacatatatacagaaatcctcaagaaaa--------------tacta-------------------gctcatcaaatccaacagcatatcaaaaagataatacaccataaccaagtgggtttcacactgaggatgcaggg i cebCap1.NW_016107827v1 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e otoGar3.GL873658 888838 306 + 5252280 I e dasNov3.JH576208 1567873 0 + 4416731 C e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1291296 0 - 13651311 C e manLeu1.NW_012103754v1 853153 0 - 2200435 C e chlSab2.chr14 1373319 1639 - 107702431 I e cerAty1.NW_012000820v1 1304011 0 - 10304083 C e macNem1.NW_012011978v1 1350542 0 + 3644372 C e macFas5.chr13 1322426 0 - 111193037 C e rheMac8.chr13 1350243 0 + 108979918 C a score=4977497.000000 s hg38.chr2_KI270774v1_alt 17262 896 + 223625 atggtttaacatacgtaagtcaataaatatggtacatcacataaa----attaaaaacaaaaaccatattatcatctcaatagatgcaggtaaagaatttgacaaaatccagcatctctttatgattaaaaccctcagtaaaatcagcatagaaaggacatgactttaggtaataaaagctatctatgacaaacccacagccaacatcatactgaatggggaaaagttgaaagcatttctcctgagaactggaagaagacagggacgcctactctcaccacttctattcatcatagtactgaagtcctagccagagcaatcagacaagaaaaacaaatcaatgacatctaaaattttgaagaggaggtcaaactatcgctgtttgctgatgatatgattgtacttagaaactgtaaggactcattcagaaagctcctagatctgataaatgaatcatgt--aaagtctcagaatacaaaagcaatgtacacaaatgagtagcactgctatacaccaataatgaccaagcttagaattaaatcaagaac----tcaatcgcttttacaacagctgcaaa----aag-taaaatatttaggaatatacctaaccaaggaggtgaaaaatccctacaagggaaactacaaaacactgctgaaagaaatcatagatgacacagacaaatggaaacacatctcatggttatgaatgggtaggatcaatactgtgaaaatgactatactgctgaaagtaatctacaaattcag-----tccccatcaaaat---atcataattcttcacagaactagaaaaagcaaacctaaaatttatgtggaaccaaaaaggagcctacatagccaaagcaaaactaag--aaaaaaacaaatttggaggtatcacattacccaacttcaaacca s panTro5.chr2A 1297057 900 + 111504155 atggtttaacatacgtaagtcaataaatatggtacaccacataaacaaaattaaaaacaaaaaccatattatcatctcagtagatgcaggtaaagaatttgacaaaatccagcatctctttatgattaaaaccctcagtaaaatcagcatagaaaggacatgactttaggtaataaaagctatctatgacaaacccacagccaacatcatactgaatggggaaaagttgaaagcatttctcctgagaactggaagaagacagggacgcctactctcaccacttctattcaccatagtactgaagtcctagccagagcaatcagacaagaaaaacaaatcaatgacatccaaaattttgaagaggaggtcaaactatcgctgtttgctgatgatatgattgtacttagaaactgtaaggactcattcagaaagctcctagatctgataaatgaatcatgt--aaagtctcagaatacaaaagcaatgtacacaaatgagtagcactgctatacaccaataatgaccaagcttagaattaaatcaagaac----tcaatcgcttttacaacagctgcaaa----aag-taaaatatttaggaatatacctaaccaaggaggtgaaaaatccctacaagggaaactacaaaacactgctgaaagaaatcatagatgacacagacaaatggaaacacatctcatggttatgaatgggtaggatcaatactgtgaaaatgactatactgctgaaagtaatctacaaattcag-----tccccatcaaaat---atcataattcttcacagaactagaaaaagcaaacctaaaatttatgtggaaccaaaaaggagcccacatagccaaagcaaaactaag--aaaaaaacaaatttggaggtatcacattacccgacttcaaacca i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1257981 896 + 114371477 atggtttaacatacgtaagtcaataaatatggtacatcacataaacaaaattaaaaacaaaaaccatattatcatctcaatagatgcaggtaaagaatttgacaaaatccagcatctctttatgattaaaaccctcagtaaaatcagcatagaaaggacatgactttaggtaataaaagctatctatgacaaacccacagccaacatcatactgaatggggaaaagttgaaagcatttctcctgagaactggaagaagacagggacgcctactctcaccacttctattcaccatagtactgaagtcctagccagagcaatcagacaagaaaaacaaatcaatgacatccaaaattttgaagaggaggtcaaactatcgctgtttgctgatgatatgattgtacttagaaactgtaaggactcattcagaaagctcctagatctgataaatgaatcatgt--aaagtctcagaatacaaaagcaatgtacacaaatgagtagcactgctatacaccaataatgaccaagcttagaattaaatcaagaac----tcaatcgcttttacaacagctgcaaa----aag-taaaatatttaggaatatacctaaccaaggaggtgaaaaacccctacaagggaaactacaaaacactgctgaaagaaatcatagatgacacagacaaatggaaacacatctcatggttatgaatgggtaggatcaatactgtgaaaatgactatactgctgaaagtaatctacaaattcag-----tccccatcaaaat---atcataattcttcacagaactagaaaaagcaaacctaaaatttatgtggaaccaaaaaggagcccacatagccaaagcaaaactaag--aaaaaaacaaatttggaggtatcacattac----cttcaaacca i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1283796 900 + 1464242 atggtttaacgtacgtaagtcaataaatatggttcatcacataaacaaaattaaaaacaaaaaccatattatcatctcaatagatgcaggtaaagaatttgacaaaatccagcatctctttatgattaaaaccctcagtaaaatcagcatagaaaggacatgactttaggtaataaaagctatctatgacaaacccacagccaacatcatactgaatggggaaaagttgaaagcatttctcctgagaactggaagaagacaaggacgcccactctcaccacttctattcaccatagtactgaagtcctagccagagcaatcagacaagaaaaacaaatcaatgacatccaaaattttgaagaggaggtcaaactattgctgtttgctgatgatatgattgtacttagaaactgtaaggactcattcagaaagctcctagatctgataaatgaatcatgt--aaagtctcagaatacaaaagcaatgtacacaaatgtgtagcactgctatacaccaataatgaccaagcttagaatcaaatcaagaac----tcaatcgcttttacaacagctgcaaa----aaa-taaaatatttaggaatatacctaaccaaggaggtgaaaaatccctacaagggaaactacaaaacactgctgaaagaaatcatagatgacacagacaaatggaaacacatctcatggttatgaatgggtaggatcaatactgtgaaaatgactatactgctgaaagtaatctacaaattcag-----tccccatcaaaat---atcataattcttcacagaactagaaaaagcaaacctaaaatttatgtggaaccaaaaaggagcccacatagccaaagcaaaactaag--aaaaaaacaaatttggaggtatcacattacccgacttcaaacca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1014765 900 + 81552678 atggtttaacatacataagtcaataaatatggtacatcacataaacaaaattaaaaacaaaaaccatattatcatctcaatagatgcaggtaaagcatttgacaaaatccagcatctctttatgattaaaaccctcagcaaaatcagcatagaaaggacatgactttaggtaataaaagctatctatgacaaacccacagccaacatcatactgaatggggaaaagttgaaagcatttctcctgagaactggaagaagacaaagacacccactctcaccacttctattcaccatagtactgaagtcctagccagagcaaccagacaagaaaaagaaatcaatgacatccaaaattttaaagaggagatcaaactattgctgtttgctgatgatatgattgtacatagaaactgtaaggactcattcagaaagctcctagatctgataaatgaatcatgt--aaagtctcagaatacaaaagcaatgtacacaaatgagtagcactgctatacaccaataatgaccaagcttagaattaaatcaagaac----tcaatcgcttttacaacagctgcaaa----aaa-taaaatactcaggcatatacctaaccaaggaggtgaaaaatccctacaagggaaactacaagacactgccgaaagaaatcatagatggcacagacaaatggaaacacatctcatggttatgaatgggtaggatcaatattgtgaaaatgactatactgctgaaagtaatctacaaattcag-----tccccatcaaaat---atcataattcttcacagaactagaaaaaacaaacctaaaatttatgtggaaccaaaaaggagcccacatagccaaagcaaaactaag--aaaaaaacaaatttggaggtatcacattacctgacttcaaacca i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1350243 896 + 108979918 atggtttaacatacgcaagtcagtaaacatggtacatcacataaa----attaaaaacaaaaaccatattatcatctcaatagatgcaggtaaagcatttgacaaaatatagcatctctttatgattaaaaccctcaacaaaatcagcatagaagggacatgaatttaggtcataaaagccatgtatgacagacccacaaccaacatcatactgaatgggaaaaagttgaaagcatttctcctgagaactggaagaagacaaggacgcccactctcaccacttctattcaccatagtgctgaagtcctagccagagcaatcagacaagaaaaagaaatcaatgacatccaacattttaaagaggaggtcaaactattgctgtttgc---tgatatgattgtacttagaaactgtaaggactcattcaaaaagctcctagatctgataaatgaatcatgt--aaagtctcagaatacaaaagcaatgtacacaaatgagtagcactgctatacaccaataatgaccaagcttagaattaaatcaagaac----tcaatcccttttacaacagctgcaaaaaataaa-taaaatacttaaaaatatacctaaccaaggaggtgaaaaattcctacaagggaaactacgaaacactgctgaaagaactcatagatgacacaaacaaatggaaacacatcccatgcttatgaatgggtaggatcaatattgtgaaaatgactatactgctgaacgcaatctacaaattcag-----tccccgtcaaaat---atcatcattcttcacagcactagaaaagacaaacctaaaatttatatggaaccaaaaaggagcccacatagccaaagcaaaactaag---aaaaaacaaatttggaggtatcatattacccaacttcaaacca i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1322426 896 - 111193037 atggtttaacatacgcaagtcagtaaacatggtacatcacataaa----attaaaaacaaaaaccatattatcatctcaatagatgcaggtaaagcatttgacaaaatatagcatctctttatgattaaaaccctcaacaaaatcagcatagaagggacatgactttaggtcataaaagccatgtatgacagacccacaaccaacatcataatgaatgggaaaaagttgaaagcatttctcctgagaactggaagaagacaaggacgcccactctcaccacttctattcaccatagtgctgaagtcctagccagagcaatcagacaagaaaaagaaatcaatgacatccaacattttaaagaggaggtcaaactattgctgtttgc---tgatatgattgtacttagaaactgtaaggactcgttcaaaaagctcctagatctgataaatgaatcatgt--aaagtctcagaatacaaaagcaatgtacacaaatgagtagcactgctatacaccaataattaccaagcttagaattaaatcaagaac----tcaatcccttttacaacagctgcaaaaaataaa-taaaatacttaaaaatatacctaaccaaggaggtgaaaaattcctacaagggaaactacgaaacactgctgaaagaactcatagatgacacaaacaaatggaaacacatcccatgcttatgaatgggtaggatcaatattgtgaaaatgactatactgctgaacgcaatctacaaattcag-----tccccgtcaaaat---atcatcattcttcacagaactagaaaagacaaacctaaaatttatatggaaccaaaaaggagcccacatagccaaagcaaaactaag---aaaaaacaaatttggaggtatcatattacccaacttcaaacca i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1350542 897 + 3644372 atggtttaacatacgcaagtcagtaaacatggtacatcacataaa----attaaaaacaaaaaccatattatcatctcaatagatgcaggtaaagcatttgacaaaatatagcatctctttatgattaaaaccctcaacaaaatcagcatagaagggacatgactttaggtcataaaagccatgtatgacagacccacaaccaacatcatactgaatgggaaaaagttgaaagcatttctcctgagaactggaagaagacaaggacgcccactctcaccacttctattcaccatagtgctgaagtcctagccagagcaatcagacaagaaaaagaaatcaatgacatccaacattttaaagaggaggtcaaactattgctgtttgc---tgatatgattgtacttagaaactgtaaggactcattcaaaaagctcctagatctgataaatgaatcatgt--aaagtctcagaatacaaaagcaatgtacacaaatgagtagcactgctatacaccaataatgaccaagcttagaattaaatcaagaac----tcaatcccttttacaacagctgcaaaaaataaa-taaaatacttaaaaatatacctaaccaaggaggtgaaaaattcctacaagggaaactacgaaacactgctgaaagaactcatagatgacacaaacaaatggaaacacatcccatgcttatgaatgggtaggatcaatattgtgaaaatgactatactgctgaacgcaatctacaaattcag-----tccccgtcaaaat---atcatcattcttcacagaactagaaaagacaaacctaaaatttatatggaaccaaaaaggagcccacatagccaaagcaaaactaag--aaaaaaacaaatttggaggtatcatattacccaacttcaaacca i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1304011 898 - 10304083 atggtttaacatacgcaagtcagtaaacatggtacatcacataaa----attaaaaacaaaaaccatattatcatctcaatagatgcaggtaaagcatttgacaaaatatagcatctctttatgattaaaaccctcaacaaaatcagcatagaagggacatgactttaggtcataaaagccatgtatgacagacccacaaccaacatcatactgaatgggaaaaagttgaaagcatttctcctgagaactggaagaagacaaggacgcccactctcaccgcttctattcaccatagtactgaagtcctagccagagcaatcagacaagaaaaagaaatcaatgacatccaacattttaaagaggaggtcaaactattgctgtttgctgatgatatgattttacttagacactgtaaggactcgttcaaaaagcccctagatctgataaatgaatcatgt--gaagtctcagaatacaaaagcaatgtacacaaatgagtagcactgctatacaccaataatgaccaagcttagaattaaatcaagaac----tcaatcccttttacaacagctgcaaaaaaaaaaccaaaatacttaaaaatatacctaaccaaggaggtgaaaaattcctacaagggaaactacgaaacactgctgaaagaactcatagatgacacaaacaaatgg--acacatcccatgcttatgaatgggtaggatcaatattgtgaaaatgactatactgctgaacgcaatctacaaattcag-----tccccgtcaaaat---atcatcattcttcacagaactagaaaagacaaacctaaaatttatatggaaccaaaaaggagcccacatagccaaagcaaaactaag---aaaaaacaaatttggaggtatcatattacccgacttcaaacca i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 853153 894 - 2200435 atggtttaacatacgcaagtcagtaaacatggtacatcacataaa----attaaaaacaaaaaccatattatcatctcaatagatgcaggtaaagcatttgacaaaatatagcatctctttatgattaaaaccctcagcaaaatcagcatagaagggacatgactttaggtcataaaagccatgtatgacagacccacaaccaacatcatactgaatgggaaaaagttgaaagcatttctcctgagaactggaagaagacaaggacgcccactcgcaccacttctattcaccatagtactgaagtcctagccagagcaatcagacaagaaaaagaaatcaatgacatccaacattttaaagaggaggtcaaactattgctgtttgctgatgatatgattgtacttagaaactgtaaggactcgttcaaaaagcccctagatctgataaatgaatcatgt--aaagtctcagaatacaaaagcaatgtacacaaatgagtagcactgctatacaccagtaatgaccaagcttagaattaaatcaagaac----tcaatcccttttacaacagctgcaaaa---aaa-taaaatgcttagatatacacctaaccaaggaggtgaaaaatccctacaagggaaactacgaaacactgctgaaagaactcatagatgacacaaacaaatgg--acacatcccatgcttatgaatgggtaggatcaatattgtgaaaatgactatactgctgaacgcaatctacaaattcag-----tccccgtcaaaat---atcatcattcttcacagaactagaaaagacaaacctaaaatttatatggaaccaaaaagaagcccacatagccaaagcaaaactaag---aaaaaacaaatttggaggtatcatattacccgacttcaaacca i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1291296 898 - 13651311 atggtttaacatatgcaagtcagtaaacgtggtacatcacataaa----attaaaaacaaaaaccgtattatcatctcaatagatgcaggtaaagcatttgacaaaatatagcatctctttatgattaaaaccctcaacaaaatcagcatagaagggacatgactttaggtcataaaagccatgtatgacaaatccacagccaacatcatactgaatgggaaaaagttgaaagcatttctcctgagaactggaagaagacaaggacgcccactctcaccacttctattcaccatagtactgaagtcctagccagagcaatcagacaaggaaaagaaatcaatgacatccagcattttaaagaggaggtcaaactattgctgtttgctgatgatatgattgtacttagaaactgtaaggactcgttcaaaaagctcctagatctgataaatgaatcatgtaaaaagtctcagaatgcaaaagcaatgtacacaattgagtagcactgctgtacaccaataatgaccaagcttagaattaaatcaagaac----tcaatcccttttacaacagctgcaaaa---aaa-taaaatacttagatatatacctaaccgaggaggtgaaaaatccctacaagggaaactacaaaacactgctgaaggaactcatagatgacacagacaaatggaaacacatcccatgcttatgaatgggtaggatcaatattgtgaaaatgactatactgctgaatgcaatctacaaattcag-----tccccatcaaaat---atcatcattcttcacagaactggaaaagacaaacctaaaatttatatggacccaaaaaggagcccacatagccaaagcaaaactaag---ataaaacaaatttggaggtatcatattacctgacttcaaacca i colAng1.NW_012118821v1 C 0 C 0 s cebCap1.NW_016107827v1 1256487 905 + 1864846 atggtttaacatatgcaagtccataaatgtggtacatcacataaaca--attgaaaacaaaaactatattatcatctcaatagactcagaaaaagcctttgacaaaatccagcatc-ctttatgattaaaaccctcagcaaaattagcatagaagggagata-----aggtaataaacgccatctatgaggaacccacagccaacatcatactgaatggggagaagttgaaagcattttctcagaggactggaacaaaacaaggatgcccactcttaccacttctactcaccatagtactgaagtcctagccagagcaatcagacaagagaaagaaatcaaggacatccagatttgtaaagaggaagtcaaactatcgctgtttgcaaatgatattattgtacatataaaccgtaaggactctttc--aaagctcctagatctgataaatgaatcatgt--aaagtctcacaacacaaaagcaatgtatacaaatgagtagcactgctatacaccagtaacgaccaagctgagaatcaaatcaagaactcagtcaatcccttttacaacagctgcaaaa---aac-taaaatacttaggagtatagctaaccaaggaggggaaaggtctctacaagggaaactacaaaacactgctgaaagaaatcacagatgacacagaaaagtggaaacacatcccgtgcttatgaatgggtaggattagtattgtgaaaatgaccataccaccaaaagcaatctacaaattcagtgcaatccccatcaaaataccatcatcattgttcacagaactagaaaaaacaaacctaaaatttatatggaaccaaaaaagagtccacatagccaaagcaaaactgagcaagaagaacaaatttgtaggtatcaaattacccgacttcaaacca i cebCap1.NW_016107827v1 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e otoGar3.GL873658 888838 306 + 5252280 I e dasNov3.JH576208 1567873 0 + 4416731 C e calJac3.chr14 1310251 0 - 108792865 C e chlSab2.chr14 1373319 1639 - 107702431 I a score=2384982.000000 s hg38.chr2_KI270774v1_alt 18158 494 + 223625 taatagaaggctatagtcaccaaaacagcatggtactagtacaaaaacagacatagaccaatggaacagaatagagaacccagaaacaaagccaaatacttacagccaactgatcttgacaaagcatacaaaaacataaattggggaaagagaactctattcaatatatgggtctgggataattggcaagccacatgcag-aaaaatgaaagtggatcctcatctctcaccttatac-aaaaatcaactgaggatggatcaaagacttaaatctaagacctgaaactataaaaattctggaaggtaacatcag-aaaaactcttctagacattggcttaggccaatgagagttcatgaccaagaaccccaaagcaaatgcaacaaaaagcaaaaacaaatagatgagacctaattaaactaaaaagctcctgcacagcaaaagaaatgatcagcagagtgaacagacaacccacggaaagggataaaatcttcgcaa s panTro5.chr2A 1297957 494 + 111504155 taatagaaggctatagtcaccaaaacagcatggtactagtacaaaaacagacatagaccaatggaacagaatagagaacccagaaacaaagccaaatacttgcagccaactgatcttgacaaagcatacaaaaacataaattggggaaagagaactctattcaatatatgggtctgggataattggcaagccacatgcag-aaaaatgaaagtggatcctcatctctcaccttatac-aaaaatcaactgaggatggatcaaagacttaaatctaagacctgaaactataaaaattctggaaggtaacatcag-aaaaactcttctagacattggcttaggccaatgagagttcatgaccaagaaccccaaagcaaatgaaacaaaaagcaaaaacaaatacatgagacctaattaaactaaaaagctcctgcacagcaaaagaaatgatcagcagagtgaacagacaacccacagaaagggagaaaatcttcgcaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1258877 494 + 114371477 taatagaaggctatagtcaccaaaacagcatggtactagtacaaaaacagacatagaccaatggaacagaatagagaacccagaaacaaagccaaatacttacagccaactgatcttgacaaagcatacaaaaacataaattggggaaagagaactctattcaatatatgggtctgggataattggcaagccacatgcag-aaaaatgaaagtggatcctcatctctcaccttatac-aaaaataaactgaggatggatcaaagacttaaatctaagacctgaaactataaaaattctggaaggtaacatcag-aaaaactcttctagacattggcttaggccaatgagagttcatgaccaagaaccccaaagcaaatgcaacaaaaagcaaaaacaaatagatgagacctaattaaactaaaaagctcctgcacagcaaaagaaatgatcagcagagtgaacagacaacccacagaaagggagaaaatcttcgcaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1284696 494 + 1464242 taatagaaggctatagtcaccaaaacagcatggtactagtacaaaaacagacatagaccaatggaacagaatagagaacccagaaacaaagccaaatacttacagccaactgatcttgacaaagcatacaaaaacataaattggggaaagagaactctattcaatatataggtctggaataattggcaagccacatgcag-aaaaatgaaagtggatcctcatctctcaccttatac-aaaaatcaactgaggatggatcaaagagttaaatctaagacctgaaactataaaaattctggaaggtaacatcag-aaaaactcttctagacattggcataggccaatgagagttcatgaccaagaaccccaaagcaaatgcaacaaaaagcaaaaacaaatagatgagacctaattaaactaaaaagctcctgcacagcaaaagaaatgatcagcagagtgaacagacaacccacagaaaaggagaaaatcttcacaa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1015665 496 + 81552678 taatagaaggctatagtcaccaaaacagcatggtactagtacaaaaacagacatagaccaatggaacagcatagacaacccagaaatgaagccaaatacttacagccaactgatcttgacaaagcatacaaaaacataaattggggaaagggaactctattcaatatattggtctgggataattggcaagccacatgcagaaaaaatgaaactggatcctcatctctcaccttatac-aaaaatcaactgaggatggatcaaagacttaaatctaagacctgaaactataaaaattctggaaggtaacatcggaaaaaactcttccagacattggtttaggccaatgagagttcatgaccaagaaccccaaagcaaatgcaacaaaaagcaaaaacaaatagatgggacctaattaaactaaaaagctcctgcacagcaaaagaaatgatcagcagagtgaacagacaacccacagaaagggagaaaatcttcacaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1351139 494 + 108979918 taatagaaggctatagtcaccaaaccagcatggtactagtacaaaaacagacatagaccaatggaacagaatagagaacccagaaataaagccaaatacttacagccaactgatcttggcaaagcataccaaaacataaattggggaaagggcactctattcaatatatggggctgggataattgacaagccacatgcag-aagaatgaaactggatcctcatctctcaccttatac-aaaaatcaactgaggatggatcaaagacttaaatctaagacctgaaactataaaaattctggaagataacatcag-aaaaactcttctagacattgtcttaggccaatgagagttcatgacgaagaacccaaaagcaaatgtaacaaaaagcaaaaacaaataaatgggacctaattaaactaaaaagcttctgcacagcaaaagaaatgatcagcagagtgaacagacaacccacagaaaggaagaaaatctttgcaa i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1323322 494 - 111193037 taatagaaggctatagtcacaaaaccagcatggtactagtacaaaaacagacatagaccaatggaacagaatagagaacccagaaataaagccaaatacttacagccaactgatcttggcaaagcataccaaaacataaattggggaaagggcactctattcaatatatggggctgggataattgacaagccacatgcag-aagaatgaaactggatcctcatctctcaccttatac-aaaaatcaactgaggatggatcaaagacttaaatctaagacctgaaactataaaaattctggaagataacatcag-aaaaactcttctagacattgtcttaggccaatgagagttcatgacgaagaacccaaaagcaaatgtaacaaaaagcaaaaacaaataaatgggacctaattaaactaaaaagcttctgcacagcaaaagaaatgatcagcagagtgaacagacaacccacagaaaggaagaaaatctttgcaa i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1351439 494 + 3644372 taatagaaggctatagtcaccaaaccagcatggtactagtacaaaaacagacatagaccaatggaacagaatagagaacccagaaataaagccaaatacttacagccaactgatcttggcaaagcataccaaaacataaattggggaaagggcactctattcaatatatggggctgggataattgacaagccacatgcag-aagaatgaaactggatcctcatctctcaccttatac-aaaaatcaactgaggatggatcaaagacttaaatctaagacctgaaactataaaaattctggaagataacatcag-aaaaactcttctagacattgtcttaggccaatgagagttcatgacgaagaacccaaaagcaaatgtaacaaaaagcaaaaacaaataaatgggacctaattaaactaaaaagcttctgcacagcaaaagaaatgatcagcagagtgaacagacaacccacagaaaggaagaaaatctttgcaa i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1304909 495 - 10304083 taatagaaggctatagtcaccaaaccagcatggtactagtacaaaaacagatatagaccaatggaacagaatagagaacccagaaataaagccaaatacttacagccaactgatcttggcaaagcataccaaaacatacattggggaaaaggcactctattcaatatatggggctgggataactggcaagccacatgcag-aagaatgaaactggatcctcatatctcaccttatacaaaaaatcaagtgaggatggatcaaagacttaaatctaagacctgaaactataaaaattctggaagataacatcag-aaaaactcttctagacattatcttaggccaatgatagttcatgacgaagaacccaaaagcaaatgcaacaaaaagcaaaaacaaatagatgggacctaattaaactaaaaagcttctacacagcaaaagaaatgatcagcagagtgaacagacaacccacagaaaggaagaaaatctttgcaa i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 854047 494 - 2200435 taatagaaggctatagtcaccaaaccagcatggtactagtacaaaaacagacatagaccaatggaacagaatagagaacccagaaataaagccaaatacttacagccaactgatcttgacaaagcataccaaaacataaattggggaaagggcactctattcaatatatgaggctgggataattggcaagccacatgcag-aagaatgaaactggatccgcatctctcaccttatac-aaaaatcaactgaggatggatcaaagacttaaatctaagacctgaaactataaaaattctggaagataatgtcag-aaaaactcttctagaccttgtcttaggccaatgagaattcatgacgaagaacccaaaagcaaatgcaacaaaaagcaaaaacaaataaatgggacctaattaaactaaaaagcttctgcacagcaaaagaaatgatcagcagagtgaacagacaacccacagaaaggaagaaaatctttgcaa i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1292194 494 - 13651311 taatagaaggctagagtcaccaaaccagcatggtgctagtacaaaaacagacgtagatcaatggaacagaatagagaacccagaaataaagccaaatacttacagccaactgatcttgacaaagcataccaaaacataaattggggaaaggacactctattcaatatatggggctgggataatcggcaagccacatgcag-aagaatgaaactggatcctcatctctcaccttatac-aaaaatcaactaaggatggatcaaagacttaaatctaagacctgaaactataaaaattctggaagataacatcag-aaaaactcttctagatattgtcttaggccaatgagagttcatgacgaagaacccaaaagcagatgcaacaaaaagcaaaagcaaatagatgggacctaattaaactaaaaagcttctgcacagcaaaagaaatgatcagcagagtgaacagacaacccacagaaagggagaaaatctttgcaa i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257392 0 + 1864846 C e otoGar3.GL873658 888838 306 + 5252280 I e dasNov3.JH576208 1567873 0 + 4416731 C e calJac3.chr14 1310251 0 - 108792865 C e chlSab2.chr14 1373319 1639 - 107702431 I a score=5398950.000000 s hg38.chr2_KI270774v1_alt 18652 935 + 223625 tctatatattcgataaaggactaatatccagactctgcaaggaactcaaacaaaccagaaagaagaaaacaaataatctcatcaaaaagtgggcaaaggacatgaataggcaattctcaaaagaaaatatacaaatggccaacaaacatatgaaaaaatgctcaacatcagtaatttgcagggaaatgcaaattaaaaccacaacatataagctaccttactcctgcaagaatggccataatcaaaaagtt-aaaaaacaatagatgtcggtgtgaatgtgataaaaagggaacacttttac-ctgctggtgggaatgtaaactagcacaaccactgtggaaaacagtgtggagattccttgaagaactaaaagtaggactgccatttgatccagcaaccccactattgggtatctacccaaagg------aaaaaaaa--gtcatatgaaaaagaca-----catgcacacaaatgtttatagcagcacaattagcaatttcaaagacatggaaccaacctaagtgcccatccaccaatgagtagataaagaaagtatggtacatatactccatggaatattactcaaccatacaaaggaacaaaataatgtcttttgcagcaacttggatggagctggaagccattattctaagtgaagtaactcaggaatggaaaaccaaatatc--acgttctcattcataaatgggagctaagtgatgaggacgcaaaggcatacaaatgatacaatgggctttggggaattg--gggggaaggatgggaggggactgaggaataaaagactacacattgggtatagtgtacactgcatgggtgacaggtgcaccaaaatctcagaaatcactgctaaacaacttaaccatgtaaccaaaaacccccattccccaaaaactattgaaataaaaaTAAAAATGAATGTTCAAAACGTGCA s panTro5.chr2A 1298451 934 + 111504155 tctatgtattcgataaaggactaatatccagactctgcaaggaactcaaacaaaccagaaagaagaaaacaaataatctcatcaaaaagtgggcaaaggacaaaaataggcaattctcaaaagaaaatatacaaacggccaacaaacatatgaaaaaatgctcaacatcactaatttgcagggaaatgcaaattaaaaccacaacatataacctaccttactcctgcaagaatggccataatcaaaaagtt-aaaaaacaatagacgttggtgtgaatgtggtaaaaagggaacacttttacactgctggtgggaatgtaaactagcacaaccactatggaaaacagtgtggagattccttgaagaactaaaagtaggactgccatttgatccagcaaccccactattgggtatctacccaaagg------gaaaaaaa--gtcatatgaaaaagaca-----catgcacacaaatgtttacagcagcacaattagcaatttcaaagacatggaaccaacctaagtgcccaaccaccaatgagtagataaagaaagtatggtacatatactccacggaatattactcaaccatacaaaggaacaaaataatgtcttttgcagcaacttggatggagctggaagccattattctaagtgaagtaactcaggaatggaaaaccaaatatc--atgttctcattcataaatgggagctaagtgatgaggacgcaaaggcatagaaatgatacaatgggctttggggaattg--aggggaaggatgggaggggactgaggaataa--gactacacattgggtatagtgtacactgcatgggtgacaggtgcaccaaaatctcagaaatcactgctaaacaacttaaccatgtaaccaaaaacccccattccccaaaaactattgaaataaaaaTAAAAATGAATGTTCAAAATGTGCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1259371 935 + 114371477 tctatatattcgataaaggactaatatccagactctgcaaggaactcaaacaaaccagaaagaagaaaacaaataatctcatcaaaaagtgggcaaaggacatgaataggcaattctcaaaagaaaatatacaaatggccaacaaacatatgaaaaaatgctcaacatcactaatttgcagggaaatgcaaattaaaaccacaacatataaactaccttactcctgcaagaatggccataatcaaaaagtt-aaaaaacaatagatgttggtgtgaatgtgataaaaagggaacacttttacactgctggtgggaatgtaaactagcacaaccactatggaaaacagtgtggagattccttgaagaactaaaagtaggactgccatttgatccagcaaccccactattgggtatctacccaaagg-------aaaaaaa--gtcatatgaaaaagaca-----catgcacacaaatgtttacagcagcacaattagcaatttcaaagacatggaaccaacctaagtgcccatccaccaaagagtagataaagaaagtatggtacatatactccatggaatattactcaaccatacaaaggaacaaaataatgtcttttgcagcaacttggatggagctggaagccattattctaagtgaagtaactcaggaatggaaaaccaaatatc--atgttctcattcataaatgggagctaagtgatgaggacgcaaaggcatacaaatgatacaatgggctttggggaattg--gggggaaggatgggaggggactgaggaataaaagactacacattgggtatagtgtacactgcatgggtgacaggtgcaccaaaatctcagaaatcactgctaaacaacttaaccatgtaaccaaaaacccccattccccaaaaactattgaaataaaaaTAAAAATGAATGTTCAAAATGTGCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1285190 934 + 1464242 tctatatattcgataaaggactaatatccagactctgcaaggaactcaaacaaaccagaaagaagaaaacaaataatctcatcaaaaagtgggcaaaggacaaaaataggcaattctcaaaagaaaatctacaaacggccaacaaacatttgaaaaaatgctcaacatcactaatttgcagggaaatgcaaattaaaaccacaacatataagctaccttactcctgcaagaatggccataatcaaaaagtt-aaaaaacaatagatgttggtgtgaatgtggtaaaaagggaacacttttacactgctggtgggaatgtaaactagcacaaccactatggaaaacagtgtggagattccttgaagaactaaaagtaggactgccatttgatccagcaaccccactattgggtatctacccaaagg--------aaaaaa--gtcatatgaaaaagaca-----catgcacacaaatgtttatagcagcacaattagcaatttcaaagacatggaaccaacctaagtgcccatccaccgatgagtagataaagaaagtatggtacatatactccatggaatattactcaaccatacaaaggaacaaaataatgtcttttgcagcaacttggatggagctggaagccattattctaagtgaagtaactcagcaatggaaaaccaaatatc--atgctctcattcataaatgggagccaagtgatgaggacgcaaaggcatacaaatgatacaatgggctttggggaattg--aggggaaggatgggaggggactgaggaataaaagactacacattgggtatagtgtacactgcatgggtgacaggtgcaccaaaatctcagaaatcactgctaaacaacttaaccatgtaaccaaaaacccccattccccaaaaactattgaaataaaaaTAAAAATGAATGTTCAAAACGTGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1016161 936 + 81552678 tctatatattcgataaaggactaatatccagactctgcaaggaactcaaacaaaccagaaagaagaaaacaaataatctaatcaaaaagtgggcaaaggacatgaataggcaattctcaaaagaaaatatacaaacggccagcaaacatatgaaaaaatgctcaacatcactaatttgcagggaaatgcaaattaaaaccacaacatataagctaccttactcctgcaagaatggccataatcaaaaagtt-aaaaaacaatagatgttggtgtgaatgtggtaaaaa-ggaacacttttacactgctggtgggaatgtaaactagcacaaccactatggaaaacagtgtggagattccttgaagaactaaaagtaggactgccatttgatccagcaaccccactattgggtatctacccaaagg-----aaaaaaaaa--gtcatatgaaaaagaca-----catgcacacaaatgtttatagcagcacaattagcaatttcaaagacatggaactaacctaagtgcccatcaaccaatgagtagataaagaaagtatggtacatatactccatggaatattactcaaccatacaaaggaacaaaataatgtcttttgcagcaacttggatggagctggaagccattattctaagtgaagtaactcaggaatggaaaaccaaatatc--atgttctcattcataaacgagagctaagcgatgaggatgcaaaggcatacaaatgatacaatgggctttggggaattg--gggggaaggatgggaggggactgaggaataaaagactacacattgagtatagtgtacactgcacgggtgacaggtgcaccaaaatctcagaaatcactgctaaacaacttaaccatgtaaccaaaaacccccattccccaaaaactattgaaataaaaaTAAAAATGAATGTTCAAAATGTGTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1351633 945 + 108979918 tctatatattcgatacaagactaatatccagactctgcaaggaactcaaacaaaccggaaagaaaaaaacaaataatctcatcaaaaagtgggcaaaggacatgaataggcagttctcaaaagaaaatatacaaacagccaacaaacctatgaaaaaatgttcaacatcactaatttgcagggaaatgcaaattaaaaccacaacatataagctaccttactcctgcaagaatggccataatcaaaaagttaaaaaaacaatagatgttggtgtgaatgtggtaaaaagggaacacttttacactgctggtgggaaagtaaactagcacaaccactatggaaaacagtgtggagattccttgaagaactaaaagtaggactgccatttgatccagcaatcccactattggatatctacccaaagg---aaaaagaaaaa--gtcatatgaaaaagacac----catgcacacaaatgtttatagcagcacaattagcaatttcagagacatggaaccaacctaagtgcccatcaaccaatgagtagataaagaaagcatggtacatatactccatggaatgttactcaaccataaaaaggaacaaaataatgtcttttgcagcaacttggatggagctggaagccattattctaagtgaagtaactcaggaatggaaaaccaagtatcatatgttctcattcataaatgggagctaagcgatgaggatgcaaaggcatacaaatgatacagtggactttggggaattggtgggggaaggatgggaggggactgaggaataaaagacttcacaccgggtatagtgtacactgcatggatgacaggtgcaccaaaatgtcagaaatcactactaaataacttaaccatgtaaacaaaaacccccattccccaaaaactattgaaataaaaaTGAAAATGAATATTCAAAACGTGCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1323816 945 - 111193037 tctatatattcgatacaggactaatatccagactctgcaaggaactcaaacaaaccggaaagaaaaaaacaaataatctcatcaaaaagtgggcaaaggacatgaataggcagttctcaaaagaaaatatacaaacagccaacaaacctatgaaaaaatgttcaacatcactaatttgcagggaaatgcaaattaaaaccacaacatataagctaccttactcctgcaagaatggccataatcaaaaagttaaaaaaacaatagatgttggtgtgaatgtggtaaaaagggaacacttttacactgctggtgggaaagtaaactagcacaaccactatggaaaacagtgtggagattccttgaagaactaaaagtaggactgccatttgatccagcaatcccactattggatatctacccaaagg---aaaaaaaaaaa--gtcatatgaaaaagacac----catgcacacaaatgtttatagcagcacaattagcaatttcagagacatggaaccaacctaagtgcccatcaaccaatgagtagataaagaaagcatggtacatatactccatggaatgttactcaaccataaaaaggaacaaagtaatgtcttttgcagcaacttggatggagctggaagccattattctaagtgaagtaactcaggaatggaaaaccaagtatcatatgttctcattcataaatgggagctaagcaatgaggacacaaaggcatacaaatgatacagtggactttggggaattggtgggggaaggatgggaggggactgaggaataaaagacttcacaccgggtatagtgtacactgcacggatgacaggtgcaccaaaatgtcagaaatcactactaaataacttaaccatgtaaacaaaaacccccattccccaaaaactattgaaataaaaaTGAAAATGAATATTCAAAACGTGCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1351933 945 + 3644372 tctatatattcgatacaggactaatatccagactctgcaaggaactcaaacaaaccggaaagaaaaaaacaaataatctcatcaaaaagtgggcaaaagacatgaataggcagttctcaaaagaaaatatacaaacagccaacaaacctatgaaaaaatgttcaacatcactaatttgcagggaaatgcaaattaaaaccacaacatataagctaccttactcctgcaagaatggccataatcaaaaagttaaaaaaacaatagatgttggtgtgaatgtggtaaaaagggaacacttttacactgctggtgggaaagtaaactagcacaaccactatggaaaacagtgtggagattccttgaagaactaaaagtaggactgccatttgatccagcaatcccactattggatatctacctaaagg---aaaaaaaaaaa--gtcatatgaaaaagacac----catgcacacaaatgtttatagcagcacaattagcaatttcagagacatggaaccaacctaagtgcccatcaaccaatgagtagataaagaaagcatggtacatatactccatggaatgttactcaaccataaaaaggaacaaaataatgtcttttgcagcaacttggatggagctggaagccattattctaagtgaagtaactcaggaatggaaaaccaagtatcatatgttctcattcataaatgggagctaagcgatgaggacgcaaaggcatacaaatgatacagtggactttggggaattggtgggggaaggatgggaggggactgaggaataaaagacttcacaccgggtatagtgtacactgcacggatgacaggtgcaccaaaatgtcagaaatcactactaaataacttaaccatgtaaacaaaaacccccattccccaaaaactattgaaataaaaaTGAAAATGAATATTCAAAACGTGCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1305404 947 - 10304083 tctatatatttgatacaggactaatatccagactctgcaaggaactcaaacaaaccggaaagaaaaaaacaaataatctcgtcaaaaagtgggcaaaggacgtgaataggcagttctcaaaagaaaatatacaaatggccaacaaacctatgaaaaaatgctcaacatcactaatttgcagggaaatgcaaattaaaaccacaacatataagctaccttactcctgcaagaatggccataatcaaaaagtt-aaaaaacaatagatgttggtgtgaatgtggtaacaagggaacacttttacactgctggtgggaatgtaaactagcacaaccactatggaaaacagtgtggagattccttgaagaactaaaagtaggactgccatttgatccagcaatcccactattggatatctacccaaaggaaaaaaaaaaaaaa--gtcatatgaaaaagacac----catgcacacaaatgtttatagcagcacaattagcaatttcagagacatggagccaacctaagtgcccatcaaccaatgagtagataaagaaagcatggtacatatactccatggaatgttactcaaccataaaaaggaacaaaataatgtcttttacagcaacttggacggagctggaagccattattctaagtgaagtaactcaggaatggaaaactaagtatcgtatgttctcattcataaatgggagctaagtgatgaggacgcaaaggcatacaaatgatacaatggactttggggaattggtgggggaaggatgggaggggactgaggaataaaagactacacacctggtatagtgtacactgcacggatgacaggtgcaccaaaatgtcagaaatcactactaaataacttaaccatgtaaacaaaaacccccattccccaaaaactattgaaataaaaaTGAAAATGAATGTTCAAAACGTGCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1374958 942 - 107702431 tctatatattcgatacaggactaatatccagactctgcaaggaactcaaacaaaccggaaagaaaaaaacaaataatctcatcaaaaagtgggcaaaggacatgaataggcagttctcaaaagaaaatatacaaacagccaacaaacatatgaaaaaatgctcaacatcactaatttgcagggaaatgcaaattaaaaccacaacatataagctaccttactcctgcaagaatggccataatcaaaaagtt-aaaaaacaatagatgttggtgtgaatgtggtaaaaagggaacacttttacactgctggtgggaatgtaaactagcacaaccactatggaaaacagtgtgtagattccttgaagaactaaaagtaggactgctatttgatccagcaatcccactattggatatctacccaaagg---aaaaaaaaa----gtcatatgaaaaagacac----catgcacacaaatgtttatagcagcacaattagcaatttcagagacatggaaccaacctaagtgcccatcaaccaatgagtagataaagaaagcatggtacatatactccatggaatgttactcaaccataaaaaggaacaaaataatgtcttttgcagcaactcagacggagctggaagccattattctaagtgaagtaactgaggaatggaaaaccaagtatcgtatgttctcattcataaatgggagctaagtgatgaggacgcaaaggcatacaaatgatacaatggactttggggaattggtggggaaaggatgggaggggactgaggaataaaagactacacacctggtatagtgtacactgcacggatgacaggtgcaccaaaatgtcagaaatcactactaaataacttaaccatgtaaacaaaaacccccattccccaaaaactattgaaataaaaaTGAAAATGAATGTTCAAAACGTGCA i chlSab2.chr14 I 1639 C 0 s manLeu1.NW_012103754v1 854541 947 - 2200435 tctatatattcgatacaggactaatatccagactctgcaaggaactcaaacaaaccggaaagaaaaaaacaaataatctcatcaaaaagtgggcaaaggacatgaataggcagttctcaaaagaaaatatacaaacagccaacaaacatatgaaaaaatgctcaacatcactaatttgcagggaaatgcaaattaaaaccacaacatataagctaccttactcctgcaagaatggccataatcaaaaagttaaaaaaacagtagatgttggtgtgaatgtggtaaaaagggaacacttttacactgctggtgggaatgtaaactagcacaaccactatggaaaacagtgtggagattccttgaagaactaaaagtaggactgccatttgatccagcaatcccactgttggatatctacccaaagg---aaaaaaaaaaaacgtcatatgagaaagacac----catgcacacaaatgtttatagcagcacaattagcaatttcagagacatggaaccaacctaagtgcccatcaaccaatgagtagataaagaaagcatggtacatatactccatggaatgttactccaccatgaaaaggaacaaaatagtgtcttttgcagcaacttggacggagctggaggccattattctaagtgacgtaactcaggaatggaaaaccaagtatcgtatgttctcgttcataaatgggagctaagtgatgaggacgcaaaggcatacaaatgatacaatggactttggggaattggtgggggaaggatgggaggggactgaggaataaaagactacacacctggtatagtgtacactgcacggatgacaggtgcaccaaaatgtcagaaatcactactaaatgacttaaccatgtaaacaaaaacccccattccccaaaaactattgaaataaaaaTGAAAATGAATGTTCAAAACGTGCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1292688 942 - 13651311 tctatatattcaatacaggactaatatccagactctgcaaggaactcaaacaaaccggaaagaaaaaaacaaataatctcatcaagaagtgggcaaaggacatgaataggcagttctcaaaagaaaatatacaaacggccaacaaacatatgaaaaaatgctcaacatcactaatttgcagggaaatgcaaattaaaaccacaacatataagctaccttactcctgcaagaatggccatgatcaaaaagttaaaaaa--aatagatgttggtgtgaatgtggtaaaaagggaacacttttacactgctggtgggaatgtaaactagcacaaccactgtggaaaacagtgtggagattccttgaagaactaaaagtaggaccgccatttgatccagcaatcccactattggatatctacccaaagg---aaaaaaaaaaaa-gtcatatgaaaaagacaccatgcatgcacacaaatgtttataacagcacaattagcaatttcagagacatggaaccaacctaagtacccatcaaccaatgagtagataaagaaagcatggtacatatactccatagaatgttactcaaccataaaaaggaacaaaataatgtcttttgcagcaacttggatggagctggaagccactattctaagtgaagtaactcaggaatggaaaacgaaatatcatatgttctcattcataaatgggagctaagtgataaggatgcaaaggcataccaatgacacaatggactttggggaattggtgggggaaggatgggaggggactgaggaataaaagactacacactgggtatagtgtacacggcacggatgacaggtgtaccaaaatctcagaaatcactactaaataacttaaccatgtaaacaaaaacccccattccccaaaaactattg------aaatgaaaaTGAATATTCAAAACGTGCA i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257392 0 + 1864846 C e otoGar3.GL873658 888838 306 + 5252280 I e dasNov3.JH576208 1567873 0 + 4416731 C e calJac3.chr14 1310251 0 - 108792865 C a score=2770163.000000 s hg38.chr2_KI270774v1_alt 19587 477 + 223625 TGGACAAAGTACTCAAAAGACTACAGAAAAGTGAAT--------TGTTTCTTAAATGGTTAT------------GTTGTTTCTTCTTGATTATAATCTTATCCCACTAATTGCCCTTTTCATAAAGAGATTCATGTGTTTTTGTCTCTCAACTTGGGGCC----------------CAGCCACTG-TGACCCTAAAGC-GCACTGAGCCTGTGCTCCTTGCGTAGAGGACCTTGAA-CATACCCCCGTGCGT--TCCTCTGCATCAGCTGCTGGCTTTCCATGTGACAGATGCTCCGTAAATGTTTCCTGCAATTAACCATGCTTTGAGAAACTTTATCAACATATAAGCTAATTTTTAGGAGACATGACAGAATGGGT---CCTGACATACTTCCTGGCTCTCTCAGTGTTGAGAGAAGCCCAGCAGTGGCCTGAGCC----------------GTCAGCAGCCAACCACGCTGC-------------------CTGCT-GTCCAGGAAAGGTGAACCAGGGCTATAGCTTCTGTGTGAGAAGGAAGGACTCATGC s panTro5.chr2A 1299385 476 + 111504155 TGTACAAAGTACTCAAAAGACTACAGAAAAGTGAAT--------TGTTTCTTAAATAGTTAT------------GTTGTTTCTTCTTGATTATAATCCTATCCCAGTAATTGCCCTTTTCATAGAGAGATTCATGTGTTTTTGTCTCTCAACTTGGGGCC----------------CAGCCACTG-TGACCCTAAAGC-GCACTGAGCCTGTGCTCCTTGCGTAGAGGACCTTGAA-CGTACCCCCGTGCGT---CCTCTGCATCAGCTGCTGGCTTTCCATGTGACAGATGCTCCGTAAATGTTTCCTGCAATTAACCATGCTTTGAGAAACTTTATCAACATATAAGCTAATTTTTAGGAGACATGACAGAATGGGT---CCTGACATACTTCCTGGCTCTCTCAGTGTTGAGAGAAGCCCAGCAGTGGCCTGAGCC----------------GTCAGCAGCCAACCACGCTGC-------------------CTGCT-GTCCAGGAAAGGTGAACCAGGGCTATAGCTTCTGTGTGAGAGGGAAGGACTCACGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1260306 476 + 114371477 TGGACAAAGTACTCAAAAGACTACAGAAAAGTGAAT--------TGTTTCTTAAATGGTTAT------------GTTGTTTCTTCTTGATTATAATCCTATCCCAGTAATTGCCCTTTTCATAAAGAGATTCATGTGTTTTTGTCTCTCAACTTGGGGCC----------------CAGCCACTG-TGACCCTAAAGC-GCACTGAGCCTGTGCTCCTTGCGTAGAGGACCTTGAA-CGTACCCCCGTGCGT---CCTCTGCATCAGCTGCTGGCTTTCCATGTGACAGATGCTCCGTAAATGTTTCCTGCAATTAACCATGCTTTGAGAAACTTTATCAACATATAAGCTAATTTTTAGGAGACATGACAGAATGGGT---CCTGACATACTTCCTGGCTCTCTCAGTGTTGAGAGAAGCCCAGCAGTGGCCTGAGCC----------------GTCAGCAGCCAACCACGCTGC-------------------CTGCT-GTCCAGGAAAGGTGAACCAGGGCTATAGCTTCTGTGTGAGAGGGAAGGACTCATGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1286124 476 + 1464242 TGGACAAAGTACTCAAAAGACTACAGAAAAGTGAAT--------TGTTTCTCAAATGGTTAT------------GTTGTTTCTTCTTGATTATAATCCTATCCCAGTAATTGCCCTTTTCATAAAGAGATTCATATGTTTTTGTCTCTCAACTTGGGGCC----------------CAGCCACTG-TGACCCTAAAGC-GCACTGAGCCTGTGCTCCTTGCGTAGAGGACCTTGAA-CGTACCCCCGTGCGT---CCTCTGCATCAGCTGCTGGCTTTCCATGTGACAGATGCTCCGTAAATGTTTCCTGCAATTAACCGTGCTTTGAGAAACTTTATCAACATATAAGCTAATTTTTAGGAGACATGACAGAATGGGT---CCTGACATACTTCCTGGCTCTCTCAGTGTTGAGAGAAGCCCAGCAGTGGCCTGAGCC----------------ATCAGCAGCCAACCACGCTGC-------------------CTGCT-GTCCAGGAAAGGTGAACCAGGGCTATAGCTTCTGTGTGAGAGGGAAGGACTCATGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1017097 475 + 81552678 TGGACAAAGTACTCAAAAGACTACAGAAAAGTGAAC--------TGTTTCTTAAATTGTTAT------------GTTCTGTCTTCTTGATTATAATCCTGTCCCAGTAATTGCCCTTTTCATAAAGAGATTCATGTG-TTTTGTCTCTCAACTTGGGGCC----------------CAGCCACTG-TGACCCTAAAAC-GCACTGAGCCTGTGCTCCTTGCGTAGAGGACCTTGAA-TGTA-CCCCGTGCGT---CCTCTGCATCAGCCGCTGGCTTTCCATGTGACAGATGCTCCGTAAATGTTTCCTGCAATTAACCGTGCTTTGAGAAACTTTATCAACATATAAGCTAATTTTTAGGAGACGTGACAGAATGGGT---CCTGACATACTTCCTGGCTCTCTCAGTGTTGAGAGAAGCCCAGCAGCGGCCTGAGCC----------------GTCAGCAGCCAACCACACTGC-------------------CTGCTGGTCCAGGAAAGGCGAACCAGGGCTATAGCTTCTGTGTGAGAGGGAAGGACTCATGC i nomLeu3.chr19 C 0 I 3 s rheMac8.chr13 1352578 476 + 108979918 TGGACAAAGTACTC-AAAGAATACAGAAAAGTGAAT--------TGTTTCTTAAATAGCTAT------------GTTCTTTCTTCCTGATTATAACCCTATCCCAGTAATTCCCTTTTTCATGGAGAGATTCATGTG-TTTTGTCTCTCAACTTGGGGCC----------------CAGCCACTGTTGACACTAAAGC-GCACTGAGCCTGTGCTCCTTGCGTAGAGGACTCTGAA-TGTATCCCCGTGCCT---GCACTGCATCAGCCGCTGGCTTTCCATGTGACAGATGCTTCATAAATGTTTCCTGCAAGTAACCATGCTTTGAGAAACTTTATCAACATATAAGCTAATTTTTGGGAGACGTCACAGAATGGGT---CCTAACGTACTTCCTGGCTCTCTCAGTGTTGAGAGAAGCCCAGCAGAGGCCTGAGCC----------------GTCAGCAGCCAACCACGCTGC-------------------CTGCTGGTCCAGGAAAGGCGAACCGGGGCTATAGCTTCTGTTTGAGAGGGAAGGACTCATGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1324761 476 - 111193037 TGGACAAAGTACTC-AAAGAATACAGAAAAGTGAAT--------TGTTTCTTAAATAGCTAT------------GTTCTTTCTTCCTGATTATAACCCTATCCCAGTAATTCCCTTTTTCATGGAGAGATTCATGTG-TTTTGTCTCTCAACTTGGGGCC----------------CAGCCACTGTTGACACTAAAGC-GCACTGAGCCTGTGCTCCTTGCGTAGAGGACTCTGAA-TGTATCCCCGTGCCT---GCACTGCATCAGCCGCTGGCTTTCCATGTGACAGATGCTTCATAAATGTTTCCTGCAAGTAACCATGCTTTGAGAAACTTTATCAACATATAAGCTAATTTTTGGGAGACGTGACAGAATGGGT---CCTAACGTACTTCCTGGCTCTCTCAGTGTTGAGAGAAGCCCAGCAGAGGCCTGAGCC----------------GTCAGCAGCCAACCACGCTGC-------------------CTGCTGGTCCAGGAAAGGCGAACCGGGGCTATAGCTTCTGTTTGAGAGGGAAGAACTCATGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1352878 476 + 3644372 TGGACAAAGTACTC-AAAGAATACAGAAAAGTGAAT--------TGTTTCTTAAATAGCTAT------------GTTCTTTCTTCCTGATTATAACCCTATCCCAGTAATTCCCTTTTTCATGGAGAGATTCATGTG-TTTTGTCTCTCAACTTGGGGCC----------------CAGCCACTGTTGACACTAAAGC-GCACTGAGCCTGTGCTCCTTGCGTAGAGGACTCTGAA-TGTATCCCCGTGCCT---GCACTGCATCAGCCGCTGGCTTTCCATGTGACAGATGCTTCATAAATGTTTCCTGCAAGTAACCATGCTTTGAGAAACTTTATCAACATATAAGCTAATTTTTGGGAGACGTGACAGAATGGGT---CCTAACGTACTTCCTGGCTCTCTCAGTGTTGAGAGAAGCCCAGCAGAGGCCTGAGCC----------------GTCAGCAGCCAACCACGCTGC-------------------CTGCTGGTCCAGGAAAGGCGAACCGGGGCTATAGCTTCTGTTTGAGAGGGAAGGACTCATGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1306351 480 - 10304083 TGGACAAAGTACTC-AAAGAATACAGAAAAGTGAATTGAG----TGTTTCTTAAATAGCTGT------------GTTCTTTCTTCTTGATTATAACCCTATCCCAGTAATTCCCTTTTTCATGGAGAGATTCATGTG-TTTTGTCTCTCAACTTGGGGCC----------------CAGCCACTGTTGACGCTAAAGC-GCACTGAGCCTGTGCTCCTTGCGTAGAGGACTCTGAA-TGTATCCCTGTGCCT---GCGCTGCATCAGCCGCTGGCTTTCCATGTGACAGATGCTTCATAAATGTTTCCTGCAATTAACCATGCTTTGAGAAACTTTATCAACATATAAGCTAATTTTTGGGAGACATGACAGAATGGGT---CCTAACGTACTTCCTGGCTCTCTCAGTGTTGAGAGAAGCCCAGCAGAGGCCTGAGCC----------------GTCAGCAGCCAACCACGCTGC-------------------CTGCTGGTCCAGGAAAGGCGAACCAGGGCTATAGCTTCTGTGTGAGAGGGAAGGACTCATGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1375900 480 - 107702431 TGGACAAAGTACTC-AAAGAATACAGAAAAGTGAATTGAG----TGTTTCTTAAATAGCTAT------------GTTCTTTCTTCTTGATTATAACCCTATCCCAGTAATTCCCTTTTTCATGGAGAGATTCATGTG-TTTTGTCTCTCAACCTGGGGCC----------------CAGCCACTGTTGACACTAAAGC-GCACTGAGCCTGTGCTCCTTGCGTAGAGGACTCTGAA-TGTATCCCCGTGCCT---GCGCTGCATCAGCCGCTGGCTTTCCATGTGACAGATGCTTCATAAATGTTTCCTGCAATTAACCATGCTTTGAGAAACTTTATCAACATATAAGCTAATTTTGGGGAGACGTGACAGAATGGGT---CCTAATGTACTTCCTGGCTCTCTCAGTGTTGAGAGAAGCCCAGCAGAGGCCTGAGCC----------------GTCAGCAGCCAACCACGCTGC-------------------CTGCTGGTCCAGGAAAGGCAAACCGGGGCTATAGCTTCTGTTTGAGAGGGAAGGACTCATGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 855488 477 - 2200435 TGTA-AAAGTGCTC-AAAGAATACAGAAAAGTGAATTGAG----TGTTTCTTAAATAGCTAT------------GTTCTTTCTTCTTGATTATAACCCTATCCCAGTAATTCCCTTTTTCATGGAGAGATTCATATG-TTTTGTCTCTCAACTTGGGGCC----------------CAGCCACTGTTGACACTAAAGC-GCACTGAGCCTGTGCTCCTTGCGTAGAGGACTCTGAA-TGTATCCCCGTGCCT---GCGCTGCATCAGCCGCTGGCTTTCCATGTGACAGATGCTTCATAAATGTTTCCTGCAATTAACCATGCTTTGAGAAACTTTATCAACATATAAGCTAATTTTTGGGAGACATGACAGAATGGGT---CCTAACGTACTTCCTGG--CTCTCAGTGTTGAGAGAAGCCTAGCAGAGGCCTGAGCC----------------ATCAGCAGCCAACCACGCTGC-------------------CTGCTGGTCCAGGAAAGGCGAACCAGGGCTATAGCTTCTGTGTGAGAGGGAAGGACTCATGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1293630 480 - 13651311 TGGACAAAGTACTC-AAAGAATACAGAAAAGTGAATTGAG----TGTTTCTTAAATAGCTAT------------GTTCTTTCTTCTTGATTATAACGCTATCCCAGTAGTTCCCTTTTTCATGGAGAGATTCATGTG-TTTTGTCTCTCAACTTGGGGCC----------------CAGCCACTGTTGACACTAAAGT-GCACTGAGCCCGTGCTCCTTGTGTAGAGGACTCTGAA-TGTATCTCCGTGCCT---CCGCTGCATCAGCCGCTGGCTTTCCATGTGACAGATGCTTCGTAAATGTTTCCTGCAATTAACCATGCTTTGAGAAACTTTATCAACATATAAGCTAATTTTTGGGAGACGTGACAGAATGGGT---CCTGACGTACTTCCTGGTTCTCTCAGTGTTGAGAGAAGCCCAGCAGAGGCCTGAGCC----------------GTCAGCAGCCAACCACGCTGC-------------------CTGCTGGTCCAAGAAAGGCAAACCAGGGCTATAGCTTCTGTGTGAGAGGGAAGGACTCGTGC i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1567873 549 + 4416731 TGAACATAGTACAC-CCAGGCCACAGAAAAGGGAATTGAGTAACTATTTCTTAGGTACCTTTCACTAAAGTACATTTTTCTTTCCTTGATTATAATTCTACCAAGGTCATTTCCC-TTCCTTAGAGA-ATTTATGCAATTGTGTATCTCTCCTTTAACACTCCTCTATCACTTTAACAGCCCCTTCTGTCACTATAACAGCATTAAGTGTGAGTTCTCAGAGTTTAAGATACTGAAGTTTCCCTCCGTGTATTTTCCCCTGCAGCAGCGTATGGCTTTCCATATAGGAGATGATCAATAAATATTTCCTGCAGTTAACTGTACCTTCAAAAACTTTATTAATGTATGCATTCTCTTCAAGGAGACTTGATAGAATGGGTTTCCTGAATCTACCTACAGCTTCCCTTATCACTGAAGAAGGCCTAGGAATTGCTTAAGGCAGATACTTGGGACTGAACCAGCAGGGTGCCTTGCATCTTTGGAAACACCATTAATTTTGTTGGCCCAGGAAAGCAGTATCTGGGC--TGGTATCTGCATAACAAGACCCAATTCA--- i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257392 0 + 1864846 C e otoGar3.GL873658 888838 306 + 5252280 I e calJac3.chr14 1310251 0 - 108792865 C a score=434890.000000 s hg38.chr2_KI270774v1_alt 20064 70 + 223625 TCCTCTCTGACCCTGGCTTTGGGGATTCACAGGCAGGTGAGGAAGTTAGAGCATTAAAACAATAGCCATG s panTro5.chr2A 1299861 70 + 111504155 TCCTCTCTGACCCTGGCTTTGGGGATTTACAGGCAGGTGAGGAAGTTAGAGCATTAAAACAATGGCCACG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1260782 70 + 114371477 TCCTCTCTGACCCTGGCTTTGGGGATTTACAGGCAGGTGAGGAAGTTAGAGCATTAAAACAATGGCCACG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1286600 70 + 1464242 TCCTCTCTGACCCTGGCTTTGGGGATTCACAGGCAAGTGAGGAAGTTAGAGCATTAAAACAATGGCCATG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1017575 66 + 81552678 TTTTCAAAGA----GACTTTGGGGATTCACAGGCAGATGAGAAAGTTAGAGCATTAAAACAATGGCCACG i nomLeu3.chr19 I 3 C 0 s rheMac8.chr13 1353054 70 + 108979918 TCCTCTCTGACCCTGGCTTTGGGGATTCACAGGTGGGTGAGGAAGTTAGAGCATTAAAACAATGGCCACG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1325237 70 - 111193037 TCCTCTCTGACCCTGGCTTTGGGGATTCACAGGTGGGTGAGGAAGTTAGAGCATTAAAACAATGGCCACG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1353354 70 + 3644372 TCCTCTCTGACCCTGGCTTTGGGGATTCACAGGTGGGTGAGGAAGTTAGAGCATTAAAACAATGGCCACG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1306831 70 - 10304083 TCCTCTCTGACCCTGGCTTTGGGGATTCACAGGTGGGTGAGGAAGTTAGAGTATTAAAACAATGGCCACG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1376380 70 - 107702431 TCCTCTCTGACCCTGGCTTTGGGGATTCACAGGTGGGTGAGGAAGTTAGAGTATTAAAACAATGGCCATG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 855965 70 - 2200435 TCCTCTCTGACCCTGGCTTTGGGGATTCACAGGTGGGTGAGGAAGTTAGAGCATTAAAACAATGGCCACG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1294110 70 - 13651311 TCCTCTCTGACCCTGGCTTTGGGGATTCACAGGTGGGTGAGGAAGTTAGAGCATTAAAACAATGGCCATG i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 889144 67 + 5252280 TCCTCTCTGACCCTCCTCTTGGTGACT--CAGGTGGGCAAGGGAGCCCATGCTCTAAGCTGAT-GCCTGG i otoGar3.GL873658 I 306 C 0 s dasNov3.JH576208 1568422 69 + 4416731 TCTTTTCTGACCCTTAGTTTGGGGAATTCCAGGTAGCTG-GGAATGTAATACTTGCATATTTTAGACATG i dasNov3.JH576208 C 0 I 519 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257392 0 + 1864846 C e calJac3.chr14 1310251 0 - 108792865 C a score=1015367.000000 s hg38.chr2_KI270774v1_alt 20134 172 + 223625 TAGGTAAGTAAAGCCAGTCTGGGCCCAGGGAAAACCAAGAAAA-TTTCTAATTACTTTATTTTCGACCATCAGAGCTTCTAAGATAAATTAAAAATTAGACTGGAGTCCTACGAGTGAATTCCGTTTTCCAAGTATCATTGCACTAAATCTAGACATGTACTTCAGCCTGTGT s panTro5.chr2A 1299931 172 + 111504155 TAGGTAAGTAAAGCCAGTCTGGGCCCAGGGAAAACCAAGAAAA-TTTCTAATTACTTTATTTTCGACCATCAGAGCTTCTAAGATAAATTAAAAATTAGACTGGAGTCCTACGGGTGAATTCCGTTTTCCAAGTATCATTGCACTAAATCTAGACATGTACTTCAGCCTGTGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1260852 172 + 114371477 TAGGTAAGTAAAGCCAGTCTGGGCCCAGGGAAAACCAAGAAAA-TTTCTAATTACTTTATTTTCGACCATCAGAGCTTCTAAGATAAATTAAAAATTAGACTGCAGTCCTACGGGTGAATTCCGTTTTCCAAGTATCATTGCACTAAATCTAGACATGTACTTCAGCCTGTGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1286670 167 + 1464242 TAGGTAAGTAAAGCCAGTCTGGGCCCAGGGAAAACCAAGAAAA-TTTCTAA-----TTATTTTCAACCATCAGAGCTTCTAAGATAAATTAAAAATTAGACTGGAGTCCTACGGGTGAATTCCGTTTTCCAAGTATCATTGCACTAAATCTAGACATGTACTTCAGCCTATGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1017641 172 + 81552678 TAGGTAAGTAAAGCCAGTCTGGGCCCAGAGAAAACCAAGAAAA-TTTCTAATTACTTTATTTTCGACCATCAGAGCTTCTAAGATAAATTAAAAATTAGACTGGAGCCCTACGGGTGAATTCCGTTTTCCAAGTATCATTGCACTAAATCTAGACATGTACTTCAGCCTGTGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1353124 171 + 108979918 TAGGTAAGTAAAGCCAGTCTGGGCCCAGGGAAAACCAAGAAAA-TTTCTAATCATTTTATTTTCAACCATCAGGGCTTCTAAGATAAATTTATG-TTAGACTGGAGTCCTACAGGTGAATTCCGTTTTCCAAGTATCATTACACTAAATCTAGACATGTGCTTCAGCCCGTGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1325307 171 - 111193037 TAGGTAAGTAAAGCCAGTCTGGGCCCAGGGAAAACCAAGAAAA-TTTCTAATCATTTTATTTTCAACCATCAGGGCTTCTAAGATAAATTTATG-TTAGACTGGAGTCCTACAGGTGAATTCCGTTTTCCAAGTATCATTACACTAAATCTAGACATGTGCTTCAGCCCGTGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1353424 171 + 3644372 TAGGTAAGTAAAGCCAGTCTGGGCCCAGGGAAAACCAAGAAAA-TTTCTAATCATTTTATTTTCAACCATCAGGGCTTCTAAGATAAATTTATG-TTAGACTGGAGTCCTACAGGTGAATTCCGTTTTCCAAGTATCATTACACTAAATCTAGACATGTGCTTCAGCCCGTGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1306901 172 - 10304083 TAGGTAAGTAAAGCCAGTCTGGGCCCAGGGAAAACCGAGAAAA-TTTCTAATCATTTTATTTTCAACCATCAGGGCTTCTAAGATAAATTTAAATTTAGACTGGAGTCCTACAGGTGAATTCCATTTTCCAAGTATCATTACACTAAATCTAGATATGTATTTCAGCCCATGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1376450 172 - 107702431 TAGGTAAGTAAAGCCAGTCTGGGCCCAGGGAAAACCAAGAAAA-TTTCTAATCATTTTATTTTCAACCATCAGGGCTTCTAAGATAAATTTAAATTTAGACTGGAGTCCTACGGGTGAATTCCATTTTCCAAGTATCATTACACTAAATCTAGACATGTACTTCAGCCTGTGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 856035 172 - 2200435 TAGGTAAGTAAAGCCAGTCTGGGCCCAGGGAAAACCAAGAAAA-TTTCTAATCATTTTATTTTCAACCATCAGGGCTTCTAAGATAAATTTAAAATTAGACTGGAGTCCTACAGGTGAATTCCGTTTTCCAAGTATCATTACACTAAATCTAGACATGTACTTCAGCCCATGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1294180 172 - 13651311 TAGGTAAGTAAAGCCAGTCTGGGCCCAGGGAAAACCAAGAAAA-TTTCTAATCATTTTATTTTCAACCATCAGGGCTTCTAAGATAAATTTAAAATTAGACTGGAATCCTACAGGTGAATTCCATTTTCCAAGTATCATTACACTAAATCTAGACATGTACTTCAGCCTGTGT i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 889211 156 + 5252280 CAGTGAGCCGCTGCCAATCTGTGCCCAGGGAAAACCAAGAAAAGTCTCTCGTCGCCCTATGGTCAACCATCAGAGCTTTTAGGATAAGCTGAAACTTC--------TCCTGCA---GACTCTCGCTTTCCCATCAT-AGTGCCCTTTACCCAGATGCAGGTTTAAGAT----- i otoGar3.GL873658 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257392 0 + 1864846 C e dasNov3.JH576208 1568491 519 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C a score=1014590.000000 s hg38.chr2_KI270774v1_alt 20306 153 + 223625 GGGTCTGG-----ATTGAACACCGAGAAACCACGTGAGGCACACTCAGGTTCTGTCCAATGAGCTTAAATAACTTGCTTGTGATTGGATTTGGCAAAATA---TGAGATGGATGTTCACACTGGGAGAACTG------TCCCTGGTAAACACTCCAGCTTCTAAGAT s panTro5.chr2A 1300103 153 + 111504155 GGGTCTGG-----ATTGAACACCGAGAAACCACGTGAGGCACATTCAGGTTCTGTCCAATGAGCTTAAATAACTTGCTTGTGATTGGATTTGGCAAAATA---TGAGATGGATGTTCACACTGGGAGAACTG------TCCCTGGTAAACACTCCAGCTTCTAAGAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1261024 153 + 114371477 GGGTCTGG-----ATTGAACACCGAGAAACCACATGAGGCACACTCAGGTTCTGTCCAATGAGCTTAAATAACTTGCTTGTGATTGGATTTGGCAAAATA---TGAGATGGATGTTCACACTGGGAGAACTG------TCCCTGGTAAACACTCCAGCTTCTAAGAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1286837 153 + 1464242 GGGTCTGG-----ATTGAACACCGAGAAACCACGTGAGGCACACTCAGGTTCTGTCCAATGAGCTTAAATAACTTGCTTGTGATTGGATTTGGCAAAATA---TGAGATGGATGTTCACACTGGGAGAACTG------TCCCTGGTAAACACTCCAGCTTCTAAGAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1017813 153 + 81552678 GGGTCTGG-----GTTGAACACGGAGAAACCACATGAGGCACACTCAGGTTCTGTCCAATGAGCTTAAATAACTCGCTTGTGATTGGGTTTGGCAAAATA---TGAGATGGATGTTCACACTGGGAGAACTG------TCCCTGGTAAACACTCCAGCTTCTAAGAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1353295 153 + 108979918 GGGTCTGG-----ATTGAACACCGAGAAACCACATGACGCACACTCAGGTTCTGTCCAATGAGCTTAAATAACTCGCTTGTGATTGGGTTTGACAAAATA---TAAGATGGATGTTCACACTGGGAGAACTG------TCCCTGGTAAACACTCCAGCTTCTAAGAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1325478 153 - 111193037 GGGTCTGG-----ATTGAACACTGAGAAACCACATGACGCACACTCAGGTTCTGTCCAATGAGCTTAAATAACTCGCTTGTGATTGGGTTTGACAAAATA---TAAGATGGATGTTCACACTGGGAGAACTG------TCCCTGGTAAACACTCCAGCTTCTAAGAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1353595 153 + 3644372 GGGTCTGG-----ATTGAACACTGAGAAACCACATGACGCACACTCAGGTTCTGTCCAATGAGCTTAAATAACTCGCTTGTGATTGGGTTTGACAAAATA---TAAGATGGATGTTCACACTGGGAGAACTG------TCCCTGGTAAACACTCCAGCTTCTAAGAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1307073 153 - 10304083 GGGTCTGG-----ATTGAACACCGAGAAACCACATGACGCACACTCAGGTTCTTTCCAACAAGCTTAAATAACTCGCTTGTGATTGGGTTTGACAAAATA---TAAGATGGATGTTCACACTGGGAGAACTG------TCCCTGGTAAACACTCCAGCTTCTAAGAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1376622 151 - 107702431 GGGTCTGG-----ATTGAACACCGAGAAACCACATGACGCACACTCAGGTTCTGTCCAACAAGCTTAAATAACTCGCTTGTGATTGG--TTGACAAAAAA---TAAGATGGATGTTCACACTGGGAGAACTG------TCCCTGGTAAACACTCCAGCTTCTAAGAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 856207 153 - 2200435 GGGTCTGG-----ATTGAACACTGAGAAACCACATGACGCACACTCAGGTTCTGTCCAATGAGCTTGTATAACTGGCTTGTGATTGGGTTTGACAAAATA---TAAGATGGATGTTTACACTGGGAGAACTG------TCCCTGGTAAACACTCCAGCTTCTAAAAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1294352 153 - 13651311 GGGTCTGG-----ATTGAACACCGAGAAACCACATGACGCACACTCAGGTTCTATCCAACAAGCTTAAATAACTCGCTTGTGATTGGGTTTGACAAAATA---TAAGATGGATGTTCACACTGGGAGAACTG------TTCCTGGTAAACACTCCAGTTTCTAAGAT i colAng1.NW_012118821v1 C 0 C 0 s cebCap1.NW_016107827v1 1257392 152 + 1864846 GGGTCTGG-----ATTGAACACGGAGAAACCACATGAGGTGCACTCAGGTTCTGTCCGACGAGCTTAAATAACTCGCTTGTGATTGGGTTTGGCAAAATATTGTAAGATGGACGTTCACACTGGGAGAACT----------CTGGTCAACACTCCAGTTTCTGAGAC i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 889367 141 + 5252280 GTGTTTGGCACATATTGAGAATCTGAAAGCTGGGC-AGACGTGCTCAGTTTCTGTGAGTCCCCTATAGATAACTCAC----------------AGAAACA---TGGGA---ATCTGTTCCCTG---GAACTGGGCGGCTCCTCTGGGGACAGTTCATTGTGTGAGGG i otoGar3.GL873658 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e dasNov3.JH576208 1568491 519 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C a score=1264817.000000 s hg38.chr2_KI270774v1_alt 20459 167 + 223625 AGA-----AATG---CAGCCTTCA-AACCCGTCTTCTGGGTGTCCTTAGAGA-----------GAGGCTGGTGTGTTTTACATTTCTTTTAGGTACATCACAGTCATGGTTTACGTCACCAGATCAAACAAATCATATTCTCATTGCTTTGTTTTCCTA------TCTTTTTTATTTGGAAGGGACCGTCCCC s panTro5.chr2A 1300256 167 + 111504155 AGA-----AATG---CAGCCTTCA-AACCCGTCTGCTGGGTGTCCTTAGAGA-----------GAGGCTGGTGTGTTTTACTTTTCTTTTAGGTACATCACAGTCATGGTTTACGTCACCAGATCAAACAAATCATATTCTCATTGCTTTGTTTTCCTA------TCTTTTTTATTTGGAAGGGACCGTCCCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1261177 167 + 114371477 AGA-----AATG---CAGCCTTCA-AACCTGTCTGCTGGGTGACCTTAGAGA-----------GAGGCTGGTGTGTTTTACTTTTCTTTTAGGTACATCACAGTCATGGTTTACGTCACCAGATCAAACAAATCATATTCTCATTGCTTTGTTTTCCTA------TCTTTTTTATTTGGAAGGGACCGTCCCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1286990 167 + 1464242 AGA-----AATG---CAGCCTTCA-AACCTGTCTGCTGGGTGACCTTAGAGA-----------GAGGCTGGTGTGTTTTACTTTTCTTTTAGGTACATCACAGTCATGGTTTACATCACCAGATCAAACAAATCATATTCTCATTGCTTTGTTTTCCTA------TCTTTTTTATTTGGAAGGGACCGTCCCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1017966 167 + 81552678 AGA-----AATG---CAGCCTTCA-AACCCATCTGCTGGGTGACCTTAGAGA-----------GAGGCTGGTGCGTTTTACTTTTCTTTCAGGTACATCACAGTCATGGTTTACGTCACCAGATCAAACAAATCATATTCTCATTGCTTTGTTTTCCTA------TCTTTTTTATTTGGAAGGGACCATCCCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1353448 167 + 108979918 AGA-----AATG---CAGCCTTCA-AACCCGTCCGCTGGGTGACCTTAGAGA-----------GAGGCTGGTGTGTTTTACTTTTCTTTCAGGTACATCACAGTCATGGTTTACGTCACCAGATCAAACAAATCATATTCTCATTGCTTTGTTTTCCTA------TCTTTTTTATTTGGAAGGGACCATCCCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1325631 167 - 111193037 AGA-----AATG---CAGCCTTCA-AACCCGTCCGCTGGGTGACCTTAGAGA-----------GAGGCTGGTGTGTTTTACTTTTCTTTCAGGTACATCACAGTCATGGTTTACGTCACCAGATCAAACAAATCATATTCTCATTGCTTTGTTTTCCTA------TCTTTTTTATTTGGAAGGGACCATCCCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1353748 167 + 3644372 AGA-----AATG---CAGCCTTCA-AACCCGTCCGCTGGGTGACCTTAGAGA-----------GAGGCTGGTGTGTTTTACTTTTCTTTCAGGTACATCACAGTCATGGTTTACGTCACCAGATCAAACAAATCATATTCTCATTGCTTTGTTTTCCTA------TCTTTTTTATTTGGAAGGGACCATCCCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1307226 167 - 10304083 AGA-----AATG---CAGCCTTCA-AACCTGTCCGCTGGGTGACCTTAGAGA-----------GAGGCTGGTGTGTTTTACTTTTTTTTCAGGTATATCACAGTCATGGTTTATGTCACCAGATCAAACAAATCATATTCTCATTGCTTTGTTTTCCTA------TCTTTTTTATTTGGAAGGGACCATCCCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1376773 167 - 107702431 AGA-----AATG---CAGCCTTCA-AACCTGTCCGCTGGGTGACCTTAGAGA-----------GAGGCTGGTGTGTTTTACTTTTCTTTCAGGTACATCACAGTCATGGTTCACGTCACCAGATTAAACAAATCATATTCTCATTGCTTTGTTTTCCTA------TCTTTTTTATTTGGAAGGGACCATCCCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 856360 167 - 2200435 AGA-----AATG---CAGCCTTCA-AACCTGTCCACTGGGTGACCTTAGAGA-----------GAGGCTGGTGTGTTTTACTTTTTTTTCAGATACGTCACAGTCATGGTTTATGTCACCAGATCAAACAAATCATATTCTCATTGCTTTGTTTTCCTA------TCCTTTTTATTTGGAAGGGACCGTCCCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1294505 167 - 13651311 AGA-----AATG---CAGCCTTCA-AACCTGTCCACTGGGTGACCTTAGAGA-----------GAGGCTGGTGTGTTTTACTTTTCTTTCAGGCACAGCACAGTCATGGTTTACGTCACCAGATCAAACAAATCATATTCTTATTGCTTTGTTTTCCTA------TCCTTTTTATTTGGAAGGGACCGTCCCC i colAng1.NW_012118821v1 C 0 C 0 s cebCap1.NW_016107827v1 1257544 165 + 1864846 AGA-----AATG---CAGCCTTCG-AACCCATCTGCTGGGTGACCTTAGAGA-----------GAGGCTGGT--GTTTTACTTTTCTTTCAGGTACATCACAGTCATGGTTTACGTCACCACATCAAACAAATCATATTCACATTGCTTTGTTTTCCTA------TCTTTTTTATTTGGAAGAGACTGTCCCC i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 889508 170 + 5252280 AGGGGCTTGAAG---CTTCCTGCT-CACCTGTTCGT-------CATTGGGCG-----------GAGGCTGGTCTGCTTTATTTTTCTTTCCATTAAATTACGTTCATAATTTATGTCACCTGATCAAACAACACACACTCTC-TTACTTGGTTTTCATAATTGCTTTTTTTAAAATTTGAAGAGATCATTCTG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1569010 188 + 4416731 agg-----aatggattagctttaagaacatgactttctggggtacatacaggttcaaaccagcacaGCATGTTTATTTTCTTTCCCTTTCAGTTACATGATAGTGATCATTTAAATCACTTCATCAGCCAGATCATATTTTCATAACTTTGTTTTTCTAATTATTTTTGTCTGCTTTTGAAGGGATCATTTCT i dasNov3.JH576208 I 519 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e calJac3.chr14 1310251 0 - 108792865 C a score=1279846.000000 s hg38.chr2_KI270774v1_alt 20626 195 + 223625 ATTATG----GTCTATATTTTGGAAGTCAAAATAATATTAGTCTTGAAATTAAAATACTATAATATTTCAACTCAAAGGCATTGGTAAAGAGATAAATCCAAAATATGCCTCTTTTGATACAGATTTTCAAAGAGAAAAGTACCAGACACAATAATACCTACCAGTTTGGAGGTGTCAA----TTTCCAAT-TCTCCCCACTCT s panTro5.chr2A 1300423 195 + 111504155 ATTATG----GTCTATATTTTGGAAGTCAAAATAATATTAGTCTTGAAATTAAAATACTATAATATTTCAACTCAAAGGCATTGGTAAAGAGATAAATCCAAAATATGCCTCTTTTGATACAGATTTTCAAAGAGAAAAGTACCAGACACAATAATACCTACCAGTTTGGAGGCGTCAA----TTTCCAAT-TCTCCCCACTCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1261344 195 + 114371477 ATTATG----GTCTATATTTTGGAAGTCAAAATAATATTAGTCTTGAAATTAAAATACTATAATATTTCAACTCAAAGTCATTGGTAAAGAGATAAATCCAAAATATGCCTCTTTTGATACAGATTTTCAAAGAGAAAAGTACCAGACACAATAATACCTACCAGTTTGGAGGCGTCAA----TTTCCAAT-TCTCCCCACTCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1287157 195 + 1464242 ATTATG----GTCTATATTTTGGAAGTCAAAATAATATTCGTCTTCAAATTAAAATACTATAATATTTCAATGCAAAGGCATTGGTAAAGAGATAAATCCAAAATATGCCTCTTTTGATACAGATTTTCAAAGAGAAAAGTACCAGACACAATAATACCTACCAGTTTGGAGGCGTCAA----TTTCCAAT-TCTCCCcattct i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1018133 195 + 81552678 ATTATG----GTCTATATTTTGGAAGTCAAAATAATATTAGTCTTGAAATTAAAACACTATAATATTTCAACTCAAAGGCATTGGTAAAGAGATAAATCCAAAATTTGCCTCTTTTGATACAGATTTTCAAAGAGAAAAGTACCAGACACAATAATACCTACCAGTTTGGAGGCATCAG----TTTCCAAT-TCTCCCCACTCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1353615 195 + 108979918 ATTAGG----GTCTATATTTTGGAAGTCAAAATAATATTAGTCTTGAAATTAAAATGCTATAATATTTCAACTCAAAGGCATTGGTAAAGAGAGAAATCCAAATTATGCCTCTTTTGATGCAGATTTTCAAAGAGAAAAGTACTAGACACAATAATACCTACCAGTTTGGAGGCATCAG----TTTCCCAT-TCTCCCCACTCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1325798 193 - 111193037 ATTAGG----GTCTATATTTTGGAAGTCAAAATAATATTAGTCTTGAAATTAAAATGCTATAATATTTCAACTCAAAGGCATTGGTAAAGAGAG--ATCCAAATTATGCCTCTTTTGATGCAGATTTTCAAAGAGAAAAGTACTAGACACAATAATACCTACCAGTTTGGAGGCATCAG----TTTCCCAT-TCTCCCCACTCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1353915 195 + 3644372 ATTAGG----GTCTATATTTTGGAAGTCAAAATAATATTAGTCTTGAAATTAAAATGCTATAATATTTCAACTCAAAGGCATTGGTAAAGAGAGAAATCCAAATTATGCCTCTTTTGATGCAGATTTTCAAAGAGAAAAGTACTAGACACAATAATACCTACCAGTTTGGAGGCGTCAG----TTTCCCAT-TCTCCCCACTCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1307393 195 - 10304083 ATTAGG----GTCTGTATTTTGGATGTCAAAATAATATTAGTCTTGAAATTAAAATACTATACTATTTCAACTCAAAGGTATTGGTAAAGAGAGAAATCCAAATTATGCCTCTTTTGATGCAGATTTTCAAAGAGAAAAGTACTAGACACAATAATACCTACCAGTTTGGAGGCGTCAG----TTTCCCAT-TCTCCCCACTCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1376940 195 - 107702431 ATTAGG----GTCTATATTTTGGAAGTCAAAATAATATTAGTCTTGAAATTAAAATACTATAATATTTCAACTCAAAGGCATTGGTAAAGAGAGAAATCCAAAATATGCCTCTTTTGATGCAGATTTTCAAAGAGAAAAGTACTAGACACAATAATACCTACCAGTTTGGAGGCATCAG----TTTCCCAT-TCTCCCCACTCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 856527 195 - 2200435 ATTAGG----ATCTATATTTTGGAAGTCAAAATAATATTAGTCTTGAAATTAAAATACTATAATATTTCAACTCAAAGGCATTGGTGAAGAGAGAAATCCAAAATGTGCCTCTTTTGTTAGAGATTTTCAAAGAGAAAAGTACTAGACACAATAATACCTACCAGCTTGGAGGCGTCAG----TTTCCCAT-TGTCCCCACTCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1294672 195 - 13651311 GTTAGG----GTCTATATTTTGGAAGTCAAAATAATATTAGTCTTGAAATTAAAATACTGTAATATTTCAACTCAAAGGCATTGGTAAAGAGAGAAATCCAAAATATGCCTCTTTTGATGCAGATTTTCAAAGAGAAAAGTACTAGACACAATAATACCTACCAGTTTGGAGGCGTCAG----TTTCCCAT-TCTCCCCACTCT i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 889678 180 + 5252280 GATAAGCTCTATCTATATTCTGGGTATCAGAATGATACTAGTCTTGGAATTAAAATACTATAGTATTTCAACTCAAAGG-------------------CCAAAATATGCCTC-TTTGCTATGGATTTTAACAGAGAAACATACTAGTCCCAGTAACGCCTAGCACTTTTGAGGTAGAGA----TAGCTCACATCCCCTCACTCT i otoGar3.GL873658 C 0 I 1026 s dasNov3.JH576208 1569198 188 + 4416731 CTTAAG----CTCTATATTTTAGACATCAGAATAACATTAGTTTTGtaataaaa----tataatatttcaactcaaaaatattgataaataaatatgtattaaatat-CTTCTTTTGGCATAGATTGAACAAGAGAAAAATAATAGTCACAGTAATATCTATTGGTTTTAAGGTTCCAAACACTTTAAAAT-TCCTAT------ i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e calJac3.chr14 1310251 0 - 108792865 C a score=78384.000000 s hg38.chr2_KI270774v1_alt 20821 12 + 223625 CTCTGTG-CTTAG s panTro5.chr2A 1300618 12 + 111504155 CTCTGTG-CTTAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1261539 12 + 114371477 CTCTGTG-CTTAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1287352 12 + 1464242 ctctgtg-tttag i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1018328 12 + 81552678 CTCTGTG-CTTAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1353810 12 + 108979918 CTCTGTG-CTTAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1325991 12 - 111193037 CTCTGTG-CTTAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1354110 12 + 3644372 CTCTGTG-CTTAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1307588 12 - 10304083 CTCTGTG-CTTAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1377135 12 - 107702431 CTCTGTG-CTTAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 856722 12 - 2200435 CTCTGTG-CTTAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1294867 12 - 13651311 GTCTGTG-CTTAG i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1569386 13 + 4416731 CTCTATGACTTAG i dasNov3.JH576208 C 0 I 123 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 889858 1026 + 5252280 I e calJac3.chr14 1310251 0 - 108792865 C a score=5084510.000000 s hg38.chr2_KI270774v1_alt 20833 884 + 223625 tgacactgaacatttgtttcatagacttgctggccatctgtctgtct-tcttttgggaaatgcctgtccaagttttccgcccattttaaaatcaggttgttttcttgcttttgagtgctttgacttccttatatattttggatattaaccccttatcaaatgcatggcttgtaaatatttcctccatt---------------------------------------------------------------------------ctttaggtagtcacttcattttgtttattatttttattgctgtgcggacactgtttagttcaatggactttaatttgtctgtttgctttcatcgcttatgcctttggaatcatatccaaaacatcattgcccagaccaatgccaaaaatattttgtcctatgttttatcctagtggttttatagtttttggtcttacatttaaatctttaatccattttgagttgattttt-tatatggtgtgaaataaatatctgatttcattcttctgaatgtgaatatccagttttccccacatcatttattgaagagactatcttttccccgttgtgtgttcttgccacccttgtaaaggagcaactgatggtaaaagcgtggatttatctttggggtctcaattctgtttttgtctatatttctgttttagcactagtaccatgctgttttggttgttacagctttgtagtatattttgaagttgggtagtgcagtgcccctagctttgttctatttacccaataatgcttttgctagtcaaggtcttttgcagttcaatatgaattttagaattttttttctgtttcagtcaaacatgtcattggaattttgatagggattgc-attgaatctataaattgctttggccatagtttcttttcttttttaggttgaataatattccattatatgcatataccc---------------------------a s panTro5.chr2A 1300630 884 + 111504155 tgacgctgaacatttgtttcatagacttgctggccatctgtctgtct-tcttttgggaaatgcctgtccaagtttttcgcccattttaaaatcaggttgttttcttgcttttgagttctttgacttccttatatattttggatattaaccccttatcaaatgcatggcttgtaaatatttcctccatt---------------------------------------------------------------------------ctttaggtagttacttcattttgtttattatttttattgctgtgcggacactgtttagttcaatggactttaatttgtctgtttgctttcatcgcttatgcctttggaatcatatccaaaacatcattgcccagaccaatgccaaaaatattttgtcctatgttttatcctagtggttttatagtttttggtcttacgtttaaatctttaatccattttgagttgattttt-tatatggtgtgaaataaatatctgatttcattcttctgaatgtgaatatccagttttccccacatcatttattgaagagactatcttttctccgttgtgtgttcttgccacccttgtaaaggagcaactgatggtaaaagcgtggatttatctttggggtctcaattctgtttttgtctatatttctgttttagcactagtaccatgctgttttggttgttacagctttgtagtatattttgaagttgggtagtgcaatgcccctagctttgttctatttacccaataatgcttttgctagtcaaggtcttttgcagttcaatatgaattttagaattttttttctgtttcagtcaaacatgtcattggaattttgatagcaattgc-attgaatctataaattgctttggccatagtttcttttcttttttaggttgaataatattccattatatgcatataccc---------------------------a i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1261551 879 + 114371477 tgacgctgaacatttgtttcatagacttgctggccatctgtctgtct-tcttttgggaaatgcctgtccaagtttttcgcccattttaaaatcagattgttttcttgcttttgagttctttgacttccttatatattttggatattaaccccttatcaaatgcatggcttgtaaatatttcctccatt---------------------------------------------------------------------------ctttaggtagttacttcat----tttattatttttattgctgtgtggacactgtttagttcaatggactttaatttgtctgtttgctttcatcgcttatgcctttggaatcatatccaaaacatcattgcccagaccaatgccaaaaatattttgtcctatgttttatcctagtagttttatagtttttggtcttacgtttaaatctttaatccattttgagttgattttt-tatatggtgtgaaataaagatctgatttcattcttctgaatgtgaatatccagttttccccacatcatttattgaagagactatcttttccctgttgtgtgttcttgccacccttgtaaaggagcaactgatggtaaaagcgtggatttatctttggggtctcaattctgtttttgtctatatttctgttttagtgctagtaccatgctgttttggttgttacagctttgtagtatattttgaagttgggtagtgcaatgcccctagctttgttctatttacccaacaatgcttttgctagtcaaggtcttttgcagttcaatatgaattttagaa-tgtttttctgtttcagtcaaacatgtcattggaattttgatagggattgc-attgaatctataaattgctttggccatagtttcttttcttttttaggttgaataatattccattatatgcatataccc---------------------------a i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1287364 882 + 1464242 tgacgctgaacatttgtttcatagacttgctggccatctgtctgtct-tcttttgggaaatgcctgtccaagtttttcgcccattttaaaatcaggttgttttcttgcttttgagttctttgacttccttatatattttggatattaa-cccttatcaaatgcatggcttgtaaatatttcctccatt---------------------------------------------------------------------------ctttaggtagttacttcattttgtttattatttttattgctgggcggacactgtttagttcaatggactttaatttgtctgtttgctttcatcacttatgcctttagaatcatatccaaaacatcattgcccagaccaatgccaaaaatattttttcctatgttttatcctagtagttttatagtttttggtcttacgtttaaatctttaatccattttgagttgattttt-tatatggtgtgaaataaagatctgatttcattcttctgaatgtgaatatccagttttccccacatcatttattgaagagactatcttttccctgttgtgtgttcttgccacccttgtaaaggagcaactgatggtaaaagcgtggatttatctttggggtctcaattctgtttttgtctatatttctgttttagcgctagtaccatgctgttttggttgttacagctttgtagtatattttgaagttgggtagtgcaatgcccctagctttgttctatttacccaacaatgcttttgctagtcaaggtcttttgcagttcaatatgaattttataa-tttttttctgtttcagtcaaacatgtcattggtattttgatagggattgc-attgaatctataaattgctttggccatagtttcttttcttttttaggttgaataatattccattatatgcatataccc---------------------------a i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1018340 888 + 81552678 tgacgctgaacatttgtttcatatacttgctggccatctgtctgtct-tcttttgggaaatgcctgtccaagtttttcgcccattttaaaatcaggttg-tttcttgcttttgagttctttgacttccttatatattttggatattaaccccttatcaaatgcatggcttgtaaatatttcctccatt---------------------------------------------------------------------------ctttaggtagttacttcattttgtttattatttttattgctgtgcagacactatttagttcaatggactttaatttgtctgtttgctttcatcgcttgtgcctttggagtcatatccaaaacatcattgcccagaccaatgccaaaaatattttgtcctatattttatcctagtagttttatagtctttggt---------------------cattttgagttgattttt-tatatggtgtgagataaagatctgatttcattcttctgaatgtgaatatccagttttccccacatcatttattgaagagactatcttttccccattgtgtattcttgccacccttgtaaaggagcaactgatggtaaaagcatggatgtatctttggggtctcaattctgtttttgtctatatttctgttttagcgctagtaccatgctgttttggttgttacagctttgtagtatattttgaagttgggtagtgcaatgcccctagctttgttctatttacccaacaatgcttttgctagtcaaggtcttttgcagttcaatatgaattttagaa-tttttttctgtttcagtcaaacatgtcattggaattttgatagggattgc-attgaatctatagattgctttggctaTagtttcttttcttttttaggttgaataatattccattatacacatatacccaatttttaatcctttcattcatggacga i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1353822 912 + 108979918 tgatgctgaacatttgtttcatagacttgttggccatccgtctgtct-tcttttgagaaaagactgtccaagttttttgcccattttaaaatcaggttgttttcttgcttttgagttctttgacttccttatatattttggatattaactccttatcagatgcatggcttgtaaatatttcctccatt---------------------------------------------------------------------------ctttaggtagttacttcatttggtttattgtttttattgctgtgcaaacactctttagttcaatggactttaatttgtctgtttgctttcatcgcttgtgcctttggagtgatatccaaaacatcattgcccagaccaatgccaaaaatattttgtcctatgttttatcctagtagttttatagtttttggtcttacatttaaatctttaatccattttgaattgatttttgtatatggtgtgagctaaagatctgatttcattcttctgcatgtgaatatccagttttccccacatcatttattgaagagactatcttttccccattatgtgttcttgccacccttgtaaaggagcaattgatggtaaaagcatggatttatctttggggtctcaattctgtttttgtctatatttctgttttagcactagtaccatgctgttttggttgttacagctttgtagtatattttgaagctgggtagtgcaatgcccctagctttgttctatttgcccaacaatgcttttgctattcaaggtcttttgtagttcaatatgaattttagaa-tttttttctgtttcagtcaaacatgtcattggaattttgatagggattgcaattgaatctgtagattgctttggctaCTGtttcttttctattttaggttgaataatattccattatatgcatatacccaatttttaatcctttcattcatgggcaa i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1326003 912 - 111193037 tgatgctgaacatttgtttcatagacttgttggccatccgtctgtct-tcttttgagaaaagactgtccaagttttttgcccattttaaaatcaggttgttttcttgcttttgagttctttgacttccttatatattttggatattaactccttatcagatgcatggcttgtaaatatttcctccatt---------------------------------------------------------------------------ctttaggtagttacttcatttggtttattgtttttattgctgtgcagacactctttagttcaatggactttaatttgtctgtttgctttcatcgcttgtgcctttggagtgatatccaaaacatcattgcccagaccaatgccaaaaatattttgtcctatgttttatcctagtagttttatagtttttggtcttacatttaaatctttaatccattttgaattgatttttgtatatggtgtgagctaaagatctgatttcattcttctgcatgtgaatatccagttttccccacatcatttattgaagagactatcttttccccattatgtgttcttgccacccttgtaaaggagcaattgatggtaaaagcatggatttatctttggggtctcaattctgtttttgtctatatttctgttttagcactagtaccatgctgttttggttgttacagctttgtagtatattttgaagctgggtagtgcaatgcccctagctttgttctatttgcccaacaatgcttttgctattcaaggtcttttgtagttcaatatgaattttagaa-tttttttctgtttcagtcaaacatgtcattggaattttgatagggattgcaattgaatctgtagattgctttggctaCTGtttcttttctattttaggttgaataatattccattatatgcatatacccaatttttaatcctttcattcatgggcaa i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1354122 912 + 3644372 tgatgctgaacatttgtttcatagacttgttggccatccgtctgtct-tcttttgagaaaagactgtccaagttttttgcccattttaaaatcaggttgttttcttgcttttgagttctttgacttccttatatattttggatattaactccttatcagatgcatggcttgtaaatatttcctccatt---------------------------------------------------------------------------ctttaggtagttacttcatttggtttattgtttttattgctgtgcagacactctttagttcaatggactttaatttgtctgtttgctttcatcgcttatgcctttggaatgatatccaaaacatcattgcccagaccaatgccaaaaatattttgtcctatgttttatcctagtagttttatagtttttggtcttacatttaaatctttaatccattttgaattgatttttgtatatggtgtgagctaaagatctgatttcattcttctgcatgtgaatatccagttttccccacatcatttattgaagagactatcttttccccattatgtgttcttgccacccttgtaaaggagcaattggtggtgaaagcatggatttatctttggggtctcaattctgtttttgtctatatttctgttttagcactagtaccatgctgttttggttgttacagctttgtagtatattttgaagctgggtagtgcaatgcccctagctttgttctatttgcccaacaatgcttttgctattcaaggtcttttgtagttcaatatgaattttagaa-tttttttctgtttcagtcaaacatgtcattggaattttgatagggattgcaattgaatctgtagattgctttggctaCTGtttcttttctattttaggttgaataatattccattatatgcatatacccaatttttaatcctttcattcatgggcaa i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1307600 912 - 10304083 tgatgctgaacatttgtttcatagacttgttggccatctgtctgtct-tcttttgagaaaagactgtccaagttttttgcccattttaaaatcaggttgttttcttgcttttgagttctttgacttccttatatattttggatattaactccttatcagatgcatggcttgtaaatatttcctccttt---------------------------------------------------------------------------ctttaggtggttacttcattttgtttattgtttttattgctgtgcagacactctttagttcaatggactttaatttgtctgtttgctttcatcgcttgtgcctttggagtcatatccaaaacatcattgcccagaccaatgccaaaaatattttgtcctatgttttatcctagtagttttatagttttgggtcttacatttaaatctttaatccattttgaattgatttttgtatatggtgtgagctaaagatctgatttcattcttctgcatgtgaatatccagttttccccacatcatttattgaagagactatcttttccccattatgtgttcttgccacccttgtaaaggagcaattgatggtaaaagcatggatttatctttggggtctcaattctgtttttgtctatatttctgttttagcactactaccatgctgttttggttgttacagctttgtagtatattttgaagttgggtagtgcaatgcccctagctttgttctgtttgcccaacaatgcttttgctattcaaggtcttttgtagttcaatatgaattttagaa-tttttttctgtttcagtcaaacatgtcattggaattttgatagggattgcaattgaatctatagattgctttggctaCTGtttcttttcttttttaggttgaataatattccattatatgcatatacccaatttttaatcctttcattcatgggcga i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1377147 987 - 107702431 tgatgctgaacatttgtttcatagacttgttggccatccgtctgtct-tcttttgagaaaagactgtccaagttttttgcccattttaaaatcaggttgttttcttgcttttgagttctttgacttccttatatattttggatattaactcctcatcagatgcatggcttgtaaatatttcctccattctttaggtagttacttcattttgtttattNNNNNNNNNNTCAtcagatgcatggcttgtaaatatttcctccattctttaggtagttacttcattttgtttattgtttttattgctgtgcagacactctttagttcaatggactttaatttgtctgtttgctttcatcgcttgtgcctttggagtcatatccaaaacatcattgcccagaccaatgccaaaaatattttgtcctatgttttatcctagtagtttcatagtttttggtcttacatttaaatctttaatccattttgaattgatttttgtatatggtgtgagctaaagatctgatttcattcttctgcatgtgaatatccagttttccccacatcatttattgaagagcctatcttttccccattatgtgttcttgccacccttgtaaaggagcaattgatggtaaaagcatggatttatctttggggtctcaattctgtttttgtctatatttctgttttagcactagtaccatgctgttttggttgttacagctttgtagtatattttgaagttgggtagtgcaatgcccctagctttgttctatttgcccaacaatgcttttgctattcaaggtcttttgtagttcaatatgaattttagaa-tttttttctgtttcagtcaaacatgtcattggaattttgatagggattgcaattgaatctatagattgctttggctaCTGtttcttttcttttttaggttgaataatattccattatatgcatatacccaatttttaatcctttcattcatgggcga i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 856734 912 - 2200435 tgacgctgaacatttgtttcatagatttgctggccatctgtctatct-ccttttgagaaaagactgtccaagtttttcgcccattttaaaatcaggttgttttcttgcttttgagttctttgacttccttatatattttggatattaactccttatcagatgcatggcttgtaaatatttcctccatt---------------------------------------------------------------------------ctttaggtagttacttcattttgtttattgtttttattgctgtgcagacactatttcgttcaatggactttaatttgtctgtttgctttcatcgcttgtgcctttggagtcatatccaaaacatcattgccgagaccaatgccaaaaatattttgtcctatgttttatcctagtagttttatagtttttggtcttacatttaaatctttaatccattttgaattgatttttgtatatggtgtgagctaaagatctgatttcattcttctgcatgtgaatatccagttttccccacatcatttattgaagagactatcttttccccattatgtgttcttgccacccttgtaaaggagcaattgatagtaaaagcatggatttatctttggggtctcaattctgtttttgtctatatttctgttttagcactagtaccatgctgttttggttgttacagctttgtagtatattttgaagttgggtagtgcaatgcccctagctttgttctatttgcccaacaatgcttttgctattcaaggtcttttgtagttcaatatgaattttagaa-tttttttctgtttcagtcaaacatgtcattggaattttgatagggattgcaattgaatctatagattgctttggCCACTGtttcttttcttttttaggttgaataatattccattatatgcatatacccaatttttaatcctttcattcatgggcga i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1294879 912 - 13651311 tgatgctgaacacttgtttcatagacttgctggccatctgtctgtctgtcttttgagaaaagactgtccaagttttttgcccattttaaaatcaggttgttttcttgcttttgagttctttgacttccttatatattttggatattaactccttatcagatgcatggcttgtaaatatttcctccatt---------------------------------------------------------------------------cttcaggtagtgacttcattttgtttattgtttttattgctgtgcagacactatttagttcaatggactttaatttgtctgtttgctttcatcgcttgtgcgtttggagtcgtatccaaagcgtcattgcccagaccaatgccaaaaatattttgtcctatgttttatcctagtcgttttacagtttccggtcttacatttaaatctttaatccattttgaattgatttttgtatatggtgtgagataaagatatgatttcattcttctgcatgcgaatatccagttttccccacatcatttgttgaagagactatcttttcccccttaagtgttcttgccacccttgtaaaggagcaattgatggtaaaagcatggatttatctttggggtctcaattctgtttttgtctatatttctgttttagcattagtaccatgctgttttggttgttacagctttgtagtatattttgaagttgggtagtgcaatgcccctagctttgttctgtttgcccagcagtgcttttgctattcaaggtcttttgtagttcaatatgaattttagaa-tttttttctgtttcagtcaaacatgtcactggaattttgatagggattgc-attgaatctatagattgctttggctgtagtttcttttcttttttaggttgaataatattccattatatgcatatacccaatttttaatcctttcgttcatggacga i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 889858 1026 + 5252280 I e dasNov3.JH576208 1569399 123 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C a score=6686158.000000 s hg38.chr2_KI270774v1_alt 21717 1139 + 223625 acacttaggctgcttccattctttggctcttgtgaataatgctactgtgaacacaggtgctcaaatatctgcttgagtccctgctttaaattattcgggtattgaacaaaagtagaattgctggatcatgtggtaattctatttttaattttttgaggaactcccatactctttgctgtagcagctgcactatttta-tttccaccaacaaaggaaattggaatgcacaagggttccagtttctccacatcctcaacaacac---------ttcctaggagag-tactggccatcctaatggatggtaaatgttatctcactggagttttat-ttgtatcttctaatgattattgatgttgaacatcttttcatgtgcttattggacacttctatatcttccctaaataaatat----tcagattttttgcccattttcttatcaagttgtcttttgttgttgttgttgctgatttataagagttcttaaatattctagatattagctccttatcaaatgtgtgatttgcggatgtct----tc-----------------tctcatt--------------ctgggagttttctctttatt------------------ctttgtttacagtgtcctttga----tgcacaaaagttatta--atgttggtgcaa---------------------------tctaattatctcttttaa----------tttatctatgctttctttgattgcctttgctgtttgtgtcatatccaagaaattgttgccaaacccaatgtcat-aagtgtttccctatgttttcttctaaactttttaaagttttaattcttatgtttaggtccttgattcatttggggttaatttttatatatggtataaggtaagagcctaaattcattgttttgcaaccggatatctaattttcccagcaccagttgattaaaaaactgctcat-tccccattgcacggacatttctgattgaatcacagacttacatggcaccacataggcc---------aggttttacttctgtgctctctggtgtattc---------------------cattcatctgtatgtctctctttataccagt-acagtg---ttttgataactgtggctttgccatcagctttaaaatcaggaaccatgagacttcagactttgtttatttgttttcaagattgttttggctagtcaggatcctttaagattacagaggcatttttctattt---aaaaaaatgtctttggg s panTro5.chr2A 1301514 1139 + 111504155 acacttaggctgcttccattctttggctcttgtgaataatgctactgtgaacacaggtgctcaaatatctgcttgagtccctgctttaaattattcgggtattgaacaaaagtagaattgctggatcatgtggtaattctatttttaattttttgaggaactcccatactctttgctgtagcagctacactatttta-tttccaccaacaaaggaaattggaatgcacaagggttccagtgtctccacatcctcaacaacac---------ttcctaggagag-tactggccattctaatggatggtaaatgttatctcactggagttttat-ttgtatcttctaatgattattgatgttgaacatcttttcatgtgcttattggacacttctatatcttccctaaataaatat----tcagattttttgcccattttcttatcaagttgtcttttgttgttgttgttgctgatttataagagttcttaaatattctagatattagctccttatcaaatgtgtgatttgcggatgtct----cc-----------------tctcatt--------------ctgggagttttctctttatt------------------ctttgtttacagtgtcctttga----tgcacaaaagttatta--atgttggtgcaa---------------------------tctaattatctcttttaa----------tttatgtatgctttctttgattgcctttgctgtttgtgtcatatccaagaaattattgccaaacccaatgtcat-aagtgtttccctatgttttcttctaaactttttaaagttttaattcttatgtttaggtccttgattcatttggggttaatttttatatatggtataaggtaagagcctaaattcattgttttgcaaccggatatctaattttcccagcaccagttgattaaaaaactgctcat-tccccattgcacggacatttctgattgaatggcagacttacatggcaccacataggcc---------aggttttacttctgtgctctctggtgtattc---------------------cattcatctgtatgtctctctttataccagt-acagtg---ttttgataactgtggctttgccatcagctttaaaatcaggaaccatgagacctcagactttgtttatttgttttcaagattgttttggctagtcaggatcctttaagattacagaggcatttttctattt---aaaaaaatgtctttggg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1262430 1140 + 114371477 acacttaggctgcttccattctttggctcttgtgaataatgctactgtgaacacaggtgctcaaatatctgcttgagtccctgctttaaattattcgggtattgaacaaaagtagaattgctggatcatgtggtaattctatttttaattttttgaggaactcccatactctttgctgtagcagctgcactatttta-tttccaccaacaaaggaaattggaatgcacaagggttccagtttctccacatcctcaacaacac---------ttcctaggagag-tactggccatcctaatggatggtaaatgttatctcactggagttttat-ttgtatcttctaatgattattgatgttgaacatcttttcatgtgcttattggacacttctatatcttccctaaataaatat----tcagattttttgcccattttcttatcaagttgttttttgttgttgttgttgctgatttataagagttcttaaatattctagatattagctccttatcaaatgtgtgatttgtggatgtct----tc-----------------tctcatt--------------ctgggagttttctctttatt------------------ctttgtttacagtgtcctttga----tacacaaaagttatta--atgttggtgcaa---------------------------tctaattatctcttttaa----------tttatctatgctttctttgattgcctttgctgtttgtgtcatatccaagaaattattgccaaacccaatgtcatgaagtgtttccctatgttttcttctaaactttttaaagttttaattcttacgtttaggtccttgattcatttggggttagtttttatatatggtataaggtaagagcctaaattcattgttttgcaactggatatctaattttcccagcaccagttgattaaaaaactgctcat-tccccattgcacggacatttctgattgaatggcagacttacatggcaccacataggcc---------aggttttacttctgtgctctctggtgtattc---------------------cattcatctgtatgtctctctttataccagt-acagtg---ttttgataactgtggctttgccatcagctttaaaatcaggaaccatgagacctcagactttgtttatttgttttcaagattgttttggctagtcaggatcctttaagattacagaggcatttttctattt---aaaaaaatgtctttggg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1288246 1132 + 1464242 acacttaggctgcttccattctttggctcttgtgaataatgctactgtgaacacaggtgctcaaatatctgcttgagtccctgctttaaattattcgagtattgaacaaaagtataattgctggatcatgtggtaattctatttttaattttttgaggaactcacatactctttgctgtagcagctgcactatttta-tttccaccaacaaaggaaattggaatgcacaagggttccagtttctccacatcctcaacaacac---------ttcctaggagag-tactggccatcctaatggatggtaagtgttatctcactggagttttat-ttgtatcttctaatgattattgatgttgaacatcttttcatgtgcttattggacacttctatatcttccctaaataaatat----tccgattttttgcccattttcttatcaagttgttttttgttgttgttgttgctgatttgtaagagttcttaaatattctagatattagctccttatcaaatgtgtgatttgtggatgtct----tc-----------------tctcatt--------------ctgggagttttctctttatt------------------ctttgtttacagtgtcctttga----tgcacaaaagttatta--atgttggtgcaa---------------------------tctaattatctcttttaa----------tttatctatgctttctttgattgcctttgctgtttgtgtcatatccaagaaattattgccaaacccaatgtcatgaagtgtttccctatgttttcttctaaactttttaaagttttaattcttacgtttaggtccttgattcatttggggttaatttttatatatggtataaggtaagagcctaaattcattgttttgcaaccggatatctaattttcccagcaccagttgattaaaaaactgctcat-tccccattgcacggacatttctggttgaatggcagacttacatggcaccacataggcc---------aggttttacttccgtgctctctggtgtattc---------------------cattcatctgtatgtctctctttataccagt-acagtg---tgttgataactgcggctttgccatcagctttaaaatcaggaaccatgagacctcagac--------tttgttttcaagattgttttggctagtcaggatcctttaagattacagatgcatttttctattt---aaaaaaatgtcttctgg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1019228 1138 + 81552678 acacttaggctgcctccattctttggctcttgtgaataatgctactgtgaacacaggtgctcaaatatctgcctgagtccctgctttaaattattcgggtattgaacaaaagtagaattgctggatcatgtggtaattctattttcaattttttgaggaactcccatactctttgctgtagcagctgcactatttta-tttccaccaacaaaggaaattggaatgcacaagggttccagtttctccacatcctcaacaacac---------ttcctaggagag-tactggccatcctaatgggtgttaaatgttatctcactggggttttat-ttgtatcttctaatgattattgatgttgaacatcttttcatgtgcttattggacacttctatatcttctctaaataaatat----tcagactttttgcccattttctaatcaagttgttatttgttgttgttgttgctgatttataagggttcttaaatattctagatattagctccttatcaaatgtgtgatttgcagatgtct----tc-----------------tctcatt--------------ctgggagttttctctttatt------------------ctttgtttacagtgtcctttga----tgcacaaaagttatta--atgttggtgtaa---------------------------tctaatta--tcttttaa----------tttatctatgctttctttgattgcctttgctatttgtgtcatatccaagaaattattgccaaacccagtgtcatgaagtgtttccctatgttttcttctaaactttttaaagttttagttcttacgtttaggtctttgattcatttggggttaatttttatatatggtataaggcaagagcctaaattcattgttttgcaaccagatatctaattttcccagcaccagttgattaaaaaactgctcat-tccccatagcacgggcatttctgattgaatggcagacttacatggcaccacataggcc---------aggttttacttctgtgctctctggtgtattc---------------------cattcatctgtatgtctctctttataccagtaacagtg---ttttgataactgtggctttgccatcagctttaaaatcaggaaccatgagacctcagactttgtttatttgttttcaagattgttttggctggtcaggatcctttaagattacagatgcatttttcta-tt---aaaaaaatgtctttggg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1354734 1163 + 108979918 acagttaggctgcttccatcctttggctcttgtgaatattgctactgtgaacacaggtgttcaaatatctgcttgagtccctgttttaaattatttgggtattgaacaaaagtagaattgctggatcatgtggtaattctatttttaattttttgaggaactcctgtactctttcctgtagcagctgcactgtttta-tttccaccaacaaaggaaattggaatgcacaagggttccagtttctccacatcctcaacaacacttctgatt-ttcctaggagag-tactggctatcctaatggatgttaaatgttatctcactggggttttat----tatcttctaatgattattgatgttgaacatcttttcatgtgcttgttggacacttgtatatcttctctagataaatat----tcagattttttgcccattttctaatcaagtt-tttgttgttgttgttgttgcttgtttgtaagagttcttaaatattctagatattagctccttatcaagtgtgtgatttgcagatgtct----tc-----------------tctcatt--------------ctgggag-tttctctttatt------------------ctttgtttacagtgtcctttga----tgcacaaaagttatta--atattggtgcaa---------------------------tctaattatctcttttaa----------tttatctatgctttatttgattgcctttgctatttgtgtcatatccaagaaattattgccaaacccaatgtcatgaagtgtttctctatgtttttgtctaaactttttaaagttttagctcttatgtttaggtccttgattcatttggggttaatttttatatatggtataaggtaagagcctaaattcattgtgttgcaagtggatatctaattttcccagcaccagttaattaaaaaactgcctat-tgcccgtagcacggacatttccgattgagtggcagacttatatggcaccacataggcc---------aggttttacttctgtgctctctggtgtattcattcatcattcattattcattcattcatctgtatgtctctctttataccagtaacagtg---ttttgattactgtggctttgccataagctttaaaatcaggaactatgagacctcagactttgtttatttgttttcaagattgttttggctagtcaggatcctttaagattacagatgcatttttctatt-----aaaaaataactttgga i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1326915 1163 - 111193037 acagttaggctgcttccatcctttggctcttgtgaatattgctactgtgaacacaggtgttcaaatatctgcttgagtccctgttttaaattatttgggtattgaacaaaagtagaattgctggatcatgtggtaattctatttttaattttttgaggaactcctgtactctttcctgtagcagctgcactgtttta-tttccaccaacaaaggaaattggaatgcacaagggttccagtttctccacatcctcaacaacacttctgatt-ttcctaggagag-tactggctatcctaatggatgttaaatgttatctcactggggttttat----tatcttctaatgattattgatgttgaacatcttttcatgtgcttgttggacacttgtatatcttctctagataaatat----tcagattttttgcccattttctaatcaagtt-ttttttgttgttgttgttgcttgtttgtaagagttcttaaatattctagatattagctccttatcaagtgtgtgatttgcagatgtct----tc-----------------tctcatt--------------ctgggag-tttctctttatt------------------ctttgtttacagtgtcctttga----tgcacaaaagttatta--atattggtgcaa---------------------------tctaattatctcttttaa----------tttatctatgctttatttgattgcctttgctatttgtgtcatatccaagaaattattgccaaacccaatgtcatgaagtgtttctctatgtttttgtctaaactttttaaagttttagctcttatgtttaggtccttgattcatttggggttaatttttatatatggtataaggtaagagcctaaattcattgtgttgcaagtggatatctaattttcccagcaccagttaattaaaaaactgcctat-tgcccgtagcacagacatttccgattgagtggcagacttatatggcaccacataggcc---------aggttttacttctgtgctctctggtgtattcattcatcattcattattcattcattcatctgtgtgtctctctttataccagtaacagtg---ttttgattactgtggctttgccataagctttaaaatcaggaactatgagacctcagactttgtttatttgttttcaagattgttttggctagtcaggatcctttaagattacagatgcatttttctatt-----aaaaaataactttgga i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1355034 1163 + 3644372 acagttaggctgcttccatcctttggctcttgtgaatattgctactgtgaacacaggtgttcaaatatctgcttgagtccctgttttaaattatttgggtattgaacaaaagtagaattgctggatcatgtggtaattctatttttaattttttgaggaactcctgtactctttcctgtagcagctgcactgtttta-tttccaccaacaaaggaaattggaatgcacaagggttccagtttctccacatcctcaacaacacttctgatt-ttcctaggagag-tactggctatcctaatggatgttaaatgttatctcactggggttttat----tatcttctaatgattattgatgttgaacatcttttcatgtgcttgttggacacttgtatatcttctctagataaatat----tcagattttttgcccattttctaatcaagtt-ttttttgttgttgttgttgcttgtttgtaagagttcttaaatattctagatattagctccttatcaagtgtgtgatttgcagatgttt----tc-----------------tctcatt--------------ctgggag-tttctctttatt------------------ctttgtttacagtgtcctttga----tgcacaaaagttatta--atattggtgcaa---------------------------tctaattatctcttttaa----------tttatctatgctttatttgattgcctttgctatttgtgtcatatccaagaaattattgccaaacccaatgtcatgaagtgtttctctatgtttttgtctaaactttttaaagttttagctcttatctttaggtccttgattcatttggggttaatttttatatatggtataaggtaagagcctaaattcattgtgttgcaagtggatatctaattttcccagcaccagttaatttaaaaactgcctat-tgcccgtagcacggacatttccgattgagtggcagacttatatggcaccacataggcc---------aggttttacttctgtgctctctggtgtattcattcatcattcattattcattcattcatctgcatgtctctctttataccagtaacagtg---ttttgattactgtggctttgccataagctttaaaatcaggaactatgagacctcagactttgtttatttgttttcaagattgttttggctagtcaggatcctttaagattacagatgcatttttctatt-----aaaaaataactttgga i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1308512 1163 - 10304083 acacttaggctgcttccatcctttggctcttgtgaatattgctactgtgaacacagatgttcaaatatctgcttgagtccctgttttaaattatttgggtattgaacaaaagtagaattgctggatcatgtggtaattctatttttaattttttgaggaactcctgtactctttcctgtagcagctgcaccatttta-tttctaccaacaaaggaaattggaatgcacaagggttccagtttctccacatcctcaacaacacttctgatt-ttcctaggagag-tactggctatcctaatggatgttaaatgttatctcactggggttttat----tatcttctaatgattattgatgttgaacatcttttcatgtgcttattggacacttgtatatcttctctagataaatat----tcagattttttgcccattttctaatcaagtt-tttgttgttgttgttgttgcttgtttgtaagagttcttaaatattctagatattagctccttatcaagtgtgtgatttgcagatgtct----tc-----------------tctcatt--------------ctgggag-tttctctttatt------------------ctttgtttacagtgtcctttga----tgcacaaaagttatta--atattggtgcaa---------------------------tctaattatctcttttaa----------tttatctatgctttatttgattgcctttgctatttgtgtcatatccaagaaattattgtcaaacccaatgtcatgaagtgtttccctatgtttttgtctaaactttttaaagttttagctcttatttttaggtccttgattcatttggggttaatttttatatatggtataaggtaagagcctaaattcattgtgttgcaagtggatatctaattttcccagcaccagttaattaaaaaactgcttat-tgcccgtagcacggacatttccgattgagtggcagacttatatggcaccacataggcc---------aggttttacttctgtgctctctggtgtgttcattcatcattcattattcattcattcatctgtatgtctctctttataccagtaacagtg---ttttgattactgtggctttgccataagctttaaaatcaggaactatgagacctcagactttgtttatttgttttcaagattgttttggctagtcaggatcctttaagattacagatgcatttttctatc-----aaaaaatatctttggg i cerAty1.NW_012000820v1 C 0 I 352 s chlSab2.chr14 1378134 1163 - 107702431 acacttaggctacttccatcctttggctcttgtgaatattgctactgtgaacacaggtgttcaaatatctgcttgagtccctgttttaaattatttgggtattgaacaaaagtagaattgctggatcatgtggtaattctatttttaattttttgaggaactcccgtactctttcctgtagcagctgcaccgtttta-tttccaccaacaaaagaaattggaatgcacaagggttccagtttctccacatcctcaacaacacttctgatt-ttcctaggagag-tactggctatcctaatggatgttaaatgttatctcactggggttttat----tatcttctaatgattattgatgttgaacatcttttcatgtgcttgttggacacttgtatatcttctctagataaatat----tcagattttttgcccattttctaatcaagta-ttttttgttgttgttgttgcttgtttgtaagagttcttaaatattctagatattagctccttatcaagtgtgtgatttgcagatgtct----tc-----------------tctcatt--------------ccgggag-tttctctttatt------------------ctttgtttacagtgtcctttga----tgcacaaaagttatta--atattggtgcaa---------------------------tctaattatctcttttaa----------tttatctatgctttatttgattgcctttgctatttgtgtcatatccaagaaattattgccaaacccaatgtcatgaagtgtttccctatgtttttgtctaaactttttaaagttttagctcttatgtttaggtccttgattcatttggggttaatttttatatatggtataaggtaagagcctaaattcattgtgtttcaagtggatatctaattttcccagcaccagttaattaaaaaactgcttat-tgcccgtggcacggacatttccgattgagtggcagacttatatggcaccacgtaggcc---------aggttttacttctgtgctctctggtgtattcattcatcattcattattcattcattcatctatatgtctctctttataccagtaacagtg---ttttgattactgtggctttgccataagctttaaaatcaggaactatgagacctcagactttgttgatttgttttcaagattgttttggctagtcaggatcctttaagattacagatgcatttttctatt-----aaaaaatatctttgga i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 857646 1167 - 2200435 acacttaggctgcttccatcctttggctcttgtgaatattgctactgtgaacacaggtgttcaaatatctgcttgagtccctgttttaaattatttgggtattgaacaaaagtaggattgctggatcatgtggtaattctatttttaattttttgaggaactcccgtactctttcctatagcagctgcaccatttta-tttccaccaacaaaggaaattggaatgcacaagggttccagtttctccacatcctcaacaacacttctgatt-ttcctaggagag-tactggctatcctaatggatgttaaatgttatctcactggggttttat----tatcttctaatgattattgatgttgaacatcttttcatgtgcttattggacacttgtatatcttttctagataaatat----tcagattttttgcccattttctaatcaagtt-ttttttgttgttgttgttgcttgtttgtaagagttcttaaatattctagatattagctccttatcaagtgtgtgatttgcagatgtcttctctc-----------------tctcatt--------------ctgggag-tttctctttatt------------------ctttgtttacagtgtcctttga----tgcacaaaagttatta--atattggtgcaa---------------------------tctaattatctcttttaa----------tttatctatgctttatttgattgcgtttgctatttgtgtcatatccaagaaattattgccaaacccaatgtcatgaagtgtttccctatgtttttgtctaaactttttaaagttttagctcttatttttaggtccttgattcatttggggttaatttttatatatggtataaggtaagagcctaaattcattgtgttgcaagtggatatctaattttcccagcaccagttaattaaaaaactgcttat-tgcccgtagcatggacatttccgattgagtggcagacttatatggcaccacataggcc---------aggttttacttctgtgctctttggtgtattcattcatcattcattattcattcattcatctgtatgtctctctttataccagtaacagtg---ttttgattactgtggctttgccataagctttaaaatcaggaactatgagacctcagactttgtttatttgttttcaagattgttttggctagtcaggatcctttaagattacagatgcatttttctatt-----aaaaaatatctttggg i manLeu1.NW_012103754v1 C 0 I 324 s colAng1.NW_012118821v1 1295791 1154 - 13651311 acacttaggctgcttccatcctttggcttttgtgaatattgctactgtgaacacaggcgttcaaatatctgcttgagtccctgctttaaattatttgggtattgaacaaaagtagaattgctggatcatgtggtaattctatttttaattttttgaggaactcccataccctttgctgtagcagctgcaccatttta-tttccaccaacaaaggaaattggaatgcgcaagggttccggtttctctacatcctcaacaacacttctgatt-ttcctaggagag-tactggctgccctaatggatattaaatgttatctcactggggttttat----tatcttctaatgattattgatgttgaacatcttttcatgtgcttattggacacttgtatatcttctctagataaatat----tcagattttttgcccattttctaatcaagtt-gtttt--ttgttgttgttgcttgtttgtaagagttcttaaatattctagatattagctccttatcaagtgtgtgatttgcagatgtct----tc-----------------tctcatt--------------ctgggag-tttctctttatt------------------ctttgtttacagtgtcctttga----tgcacaaaagttatta--atgttggtgcaa---------------------------tctaattatctc--ttaa----------tttatctctgctttatttgattgcctttgctatttgtgtcatatccaagaaattattgccaaacccaatgtcatgaagtgtgtccctatgtttttgtctaaactttttaaagttttagctcttatgttta-gtccttgattcatttggggttaatttttatatatggtataaggtaagagcctaaattcattgtgttacaagtggatatctaattttcctagcactagttaattaaaaaactgtttat-tgcccgtagcacagacatttccaattgagtggcagacttatatagcaccacgtagtcc---------aggttttacttctgtgctctctggtgtattcattcatcattcattattcattcattcatctgtatgtctctctttataccagtaatggtg---ttttgattactgtggctttgccataagctttaaaatcaggaactgtgagaccttagacttt----atttgttttcaagattgttttggctagtcaagatcctttaagattacagatgcatttttctatt-----taaaaatgtctttgga i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 890884 1145 + 5252280 acacttcagttactgctgtgtcgtgactattgtgaac----ttgctgtggatgtggaggtgtcaatgtatctttgg----ctgactttatttct--------------------ggctttctgggtcacatgttagctctatttttaatttctttagacatctccatactgtttcc-acgatgactgcaccaacccacttcccaccaa----------------gtgtgtgatcttccctttctccac-ccctcaccagcccttgggattattcctctttttgataatggccattccatcaggtgtgaggcgacgtctcattgtggttttaatttgcatctcc--------------------------ctcataaacctgttggccatttgtatgtattcttttgagaagtgtctgctcaggtactttgcccatttcttgag-------tccgttggttttcttgctattgagtt----gagttcct-cacatttggggcattaatcccttaccagatgtctagttgg--gatgtct----cccatcctgtgcattgtggcctcactggcttttccctttgctgggag-aagctctttggtttgtgcacccccctctgcttttgtgtcctgtgtgtcttgcatcttatccaaatgccaacaccacgtggatgtcaagaagcttccttcctgtcctctccccctacactcatccattttgatgcaatatggtttacttgggttttctgtggtcaca-gtgcttatggtgtcatgtcggagaaaccactgcccagcccagtgtcgtgagggactctccttggtattcttccaacagttttgaactttaa---cttacgtttaggtctttgccctatttcaggtttgctttaacataaggtgtaaggtaagagcctagcttcat----atgcacctggatatctggttttccacataccacgtga---aaagtctgtccatgcccccactgaacggagactctgggtgggacggcagcc-----tggca-cacgtagccctgtgcacatgggtctcac-----tattctctgttctttt----------------------ccttgatctgcatgtctctgtttacaccagtaacacagcacttttgattactgtggctttgcagtaagtattgaaatcaggaagtgtgagacctctgatttt---------tcttcaagattattttggccattca-gctgctgtgagagtccatatgcatttttctatttctgcagcaaatgtgcttggg i otoGar3.GL873658 I 1026 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e dasNov3.JH576208 1569399 123 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C a score=265622.000000 s hg38.chr2_KI270774v1_alt 22856 53 + 223625 atttgaatggagaatgtattgaatctgaggttcacttttggcaatattaacac s panTro5.chr2A 1302653 53 + 111504155 atttgaatggagaatgtattgaatctgaggttcacttttggcaatattaacat i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1263570 53 + 114371477 atttgaatggagaatgtattgaatctgaggttcacttttggcaatattaacat i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1289378 53 + 1464242 atttgaatggagaatgtattgaatctgaggttcacttttggcaatattgacat i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1020366 53 + 81552678 atttggatggagaatgtattgaatctgaggttcacttttggtaatattaacat i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1355897 53 + 108979918 atttggatggagaatgtgttgaatctgaggttcacttctggtaatattaacat i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1328078 53 - 111193037 atttggatggagaatgtgttgaatctgaggttcacttctggtaatattaacat i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1356197 53 + 3644372 atttggatggagaatgtgttgaatctgaggttcacttctggtaatattaacat i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1379297 53 - 107702431 atttggatggagaatgtgttgaatttgaggttcacttctggtaatattaacat i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 859137 53 - 2200435 atttggatggagaatgtgttgaatctgaggttcacttctggtaatattaacat i manLeu1.NW_012103754v1 I 324 C 0 s colAng1.NW_012118821v1 1296945 53 - 13651311 atttggatagagaatgtattgaatctgaggttcacttctggtaatattaacat i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 892029 49 + 5252280 atttttctggggaatgtattgcatctgtag-tcaccgtgggtagtaccac--- i otoGar3.GL873658 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e dasNov3.JH576208 1569399 123 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e cerAty1.NW_012000820v1 1309675 352 - 10304083 I a score=6429678.000000 s hg38.chr2_KI270774v1_alt 22909 1108 + 223625 cttaataacattatgccttccaacccataaatatgggatgcctttccatttgttggtgtcttcattactttcttttaacaattttttttagttttcattctacaagacctttgcatccatggttaagttcattccttagcattttactttttcatcctattgtaaatgggattgttttcttaat-ttctttttcagattattcattataagcagatagaaacaaaatttattttccccttctcccaatccccagctctgggtaacctctattctattgtctgtctctatgaatttgctttttctaggtgcctcatagaagtgcaatagtagaatagattaccttttctatctggcttcttttgcttagagcttaatgtcttcaaggtccatccatgttggaatatgtaccagaacattct--tttttagagctgaattatattgcatttcatggatacatcatattttattcaat-----atttgttgatgagcactctgggttatttcaccttttggctattgtgaataatggtgcaatgcacatttacatgcaagtatctgttcgagtccctttt-----tta-tttt--ttggaataccca-tgggagtgaatttcctaggtcatatcataactcta--tttaactttcttatggaactgctcatctgttctccacagcgcctatact-tgtttacattc----------------caa-------ctggcaatgaaggttccaat-ttctccgcatc---------------ctcatcaatgtttttc----------------------------------------ttttctcctttttaaaat--attatagcca-----ttgtagtag--------------------gtgtgaagtggtatct--cattttgagggt----tttgtttgtttgcatttccccaatgattgatgatgtgacacatcttaccatgtgttaaggggacatccgtgtgtcttctttggagaaac------ttaagtcctctgccca-tttttaaagtggattttttgtttttt-tg----atgttgatgtgtaggagttcttgataaattctggacattaaatccttctaagatatatgatgtgtaaatattttcttccattctgtagtttgtcttttctcactctcttgaaaatgtccttcgatgcacgaaag-ttttttattttgatcaagtccacttt-atc---tttttcttttgtt-g s panTro5.chr2A 1302706 1111 + 111504155 cttaataacattatgccttccaacccataaatatgggatgcctttccatttgttggtgtcttcattactttcttttaacaattttttttagttttcattctacaagacctttgcatccatggttaagttcattccttagcattttactttttcatcctattgtaaatgggattgttttcttaat-ttctttttcagattattcattataagcagatagaaacaaaatttattttccccttctcccaatccccagctccgggtaacctctattctattgtctgtctctatgaatttgctttttctaggtgcctcatagaagtggaatagtagaatagattaccttttctatctggcttcttttgcttagagcttaatgtcttcaaggtccatccatgttggaatatgtaccagaacattct--tttttagagctgaattatattgcattttatggatacatcatattttattcaat-----atttgttgatgagcactctgggttatgtcacctcttggctattgtgaataatggtgcaatgcacatttacatgcaagtatctgttcgagtccctttt-----tta-tttt--ttggaataccca-tgggagtgaatttcctaggtcatatcataactcta--tttaactttcttatggaactgctcatctgttctccacagcgcctatact-tgtttacattc----------------caa-------ccggcaatgaaggttccaat-ttctccgcatc---------------ctcatcaatgtttttc----------------------------------------ttttctccttttaaaaat--attatagcca-----ttgtagtag--------------------gtgtgaagtggtatct--cattttgagggt----tttgtttgtgtgcatttccccaatgattgatgatgtgacacatcttaccatgtgttaaggggacatccgtgtgtcttctttggggaaac------ttaagtcctctgccca-tttttaaagtggattttttgtttttt-tt-tttatgttgatgtgtaagagttcttgataaattctggacattaaatccttctaagatatatgatgtgtaaatattttctttcattctgtagtttgtcttttctcactctcttgaaaatgtccttcgatgcacgaaag-ttttttattttgatcaagtccacttt-atc---tttttcttttgtt-g i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1263623 1109 + 114371477 cttaataacattatgccttccaacccataaatatgggatgcctttccatttgttggtgtcttcattactttcttttaacaatttttcttagttttcattctacaagacctttgcatccatggttaagttcattccttagcattttactttttcatcctattgtaaatgggattgttttcttaat-ttcttcttcagattattcattataagtagatagaaacaaaatttattttccccttctcccaacccccagctccgggtaacctctattctattgtctgtctctatgaatttgctttttctaggtgcctcatggaagtgcaatcgtagaatagatgaccttttctatctggcttcttttgcttagagcttaatgtcttcgaggtccatccatgttggaatatgtaccagaacgttct--tttttagagctgaattatattgcattttatggatacatcatattttattcaat-----atttgttgatgagcactctgggttatgtcacctcttggctattgtgaataatggtgcaatgcacatttacatgcaagtatctgttcgagtccctttt-----tta-tttt--ttggaataccca-tgggagtgaatttcctaggtcatatcataactcta--tttaactttcttatggaactgctcatctgttctccacagcgcctatact-tgtttacattc----------------caa-------ccggcaatgaaggttccaat-ttctccgcatc---------------ctcatcaatgtttttc----------------------------------------ttttctcctttttaaaat--attatagcca-----ttgtagtag--------------------gtgtgaagtggtatct--cattttgagggt----tttgtttgtgtgcatttccccaatgattgatgatgtgacacatcttaccatgtgttaaggggacatccgtgtgtcttctttggagaaac------ttaagtcctctgccca-tttttaaagtggattttttgtttttt-tt---tatgttgatgtgtaagagttcttgataaattctggacattaaatccttctaagatatatgatgtgtaaatattttctttcattctgtagtttgtcttttctcactctcttgaaaatgtccttcgatgcacgaaag-ttttttattttgatcaagtccacttt-atc---tttttcttttgtt-g i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1289431 1112 + 1464242 cttaataatattatgccttccaacccataaatatgggatgcctttccatttgttggtgtcttcattactttcttttaacaattttttttagttttcattctacaagacctttgcatccatggttaagttcattccttagcattttactttttcatcctattgtaaatgggattgttttcttaat-ttatttttcagattattcattataagtagatagaaacaaaatttattttccccttctcccaa-ccccagctccgggtaacctctattctattgtctgtctctatgaatttgctttttctaggtgcctcatagaaatgcaatcgtagaatagatgaccttttctatctggcttcttttgcttagagcttaatgtcttcaaggtccatccatgttggaatatgtaccagaacattct--tttttagagctgaattatattgcattttatggatacatcatattttattcaat-----atttgttgatgagcactctgggttatttcaccttttggctattgtgaataatggtgcaatgcacatttacatgcaagtatctgttcgagtccctttt-----tta-tttt--ttggaataccca-tgggagtgaatttcctaggtcatatcataactcta--tttaactttcttatggaactgctcatctgttctccacagcgcctatact-tgtttacattc----------------caa-------tcggcaatgaaggttccaat-ttctccacatc---------------ttcatcaatgtttttc----------------------------------------ttttctcctttttaaaat--attatagcca-----ctgtagtag--------------------gtgtgaagtggtatct--cattttgagggttttgtttgtttgtttgcatttccccaatgattgatgatgtgacacgtcttaccatgtgttaaggggacatccgtgtgtcttctttggagaaac------ttaagtcctctgccca-tttttaaagtggattttttggttttt-tt---gatgttgatgtgtaggagttcttgataaattctggacattaaatccttccaagatacataatgtgcaaatattttcttccattctgtagtttgtcttttctctctctcttgaaaatgtccttagatgcacgaaag-ttttttattttgatcaagtccacttt-atc---tttttcttttgtt-g i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1020419 1111 + 81552678 cttaataatattatgccttccaacccataagtatgggatgcctttccatttgttggtgtcttcattac-----tttaacaattttttttagttttcattctacaagacctttgcatccatggttaagttcattccttagcattttactttttcgtcctattgtaaatgggattgttttcttaat-ttctttttcagattattcattataagtggatagaaacaaaatttattttccccttctcccgacctccagctccgggtaacctctattctattgtctgtctctatgaatttgctttttctaggtgcctcatagaagtgcagttgtagaatagatgaccttttctgtctggcttcttttgcttagagcttaatgtcttcaaggtccatccatgttggaatatgtaccagaacattct--tttttagagctgaattatattccattttatgaatacatcatattttattcaat-----atttgttgatgagcactctgggttatttcaccttttggctattgtgaataatggtgcaatgcacatttacatgcaagtatctgttcgagtccctttt-----tta-tttt--ttggaataccca-tgggagtgaatttgctaggtcatatcataactcta--tttaactttcttacagaactgctcatctgttctccatggcgcctatact-tgtttacattc----------------caa-------ccggcaatgaaggttccaat-ttctctgcatc---------------gtcatcaatgtttttc----------------------------------------ttttctcctttttaaaat--attatagcca-----ttgtagtag--------------------gtgtgaagtggtatct--cattttgagggttttgtttgtttgtttgcatttccccaatgattgatgatgtgacacatcttaccatgtgttaaggggacatccatgtgtcttctttggagaaac------ttaagtcctctgccca-tttttaaagtggattttttgtttttt-cg----acgttgatgtgtaggagttcttgataaattctggacattaaatccttctaagatatatgatgtgtaaatattttcttccattctgtagtttgtcttttctcactctcttgaaaatgtccttcgatgcatgaaagtttttttattttgatcaagtccacttt-atctcttttttcttttgtt-g i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1355950 1120 + 108979918 cttaataatattatgccttccaacccataaatatgggatgcctttccatttattggtgtcttcattactttcttttaacaatttattttagttttcattctacaagacctttgcatccatggttaagttcattccttagcattttattttttcatcctattgtaaatgggattgtttctatgat-ttctttttcagattattcattataaggggataggagcaaaatttattttccccttctcccaacctccagctctgggtaacctctattctattgtctgtctctatgaacttgctttttctaggtgtctcatagaagtgcaatcatagaatagatgaccttttctgtctggcttcttttgcttagagcttaatgtcttcaaggtccatccatgttggaataagtatcagaacattct--tttttagagctgagttatattccattttatggatacatcatattttattcaat-----atttgttgatgagcactct-ggttatttcaccttttggctattgtgaataatgatgcaatgcacatttacatgcacatatctgttcgagtccctttt-----tta-tttt--ttggaatacccattaggagtgaatgtgctaggccatatcataactctg--tttaactttcttaaggaattgctcatctgttttccacagcacctatact-tgtttacattc----------------caa-------ccatcaatgaaggttccagt-ttctccacatc---------------ctcaccaatgtttttc----------------------------------------ttttctcctttttcaaat--attacagcca-----ttgtagtag--------------------gtgtgaagtggtatct--cattttgagggttttgtttgtttgtttgcatttccccagtgattgatgatgtgatgcatcttaccctgtgttaaggggtcatctgtgtgtctcctttggagaaac------ttaagtcctctgccca-tttttaaagtggattatttggttttt-ttgttgttgttgatgtgtaggagttcttgacatattatggatattaaattcttctaagatacatgatgtataaatattttcttccattctatagttcatcttttctcactctcttgaaaatgtcctttgatgcacaaaag-ttttttattttgatcaagtccactttcatctcttttctcttttgct-g i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1328131 1120 - 111193037 cttaataatattatgccttccaacccataaatatgggatgcctttccatttattggtgtcttcattactttcttttaacaatttattttagttttcattctacaagacctttgcatccatggttaagttcattccttagcattttattttttcatcctattataaatgggattgtttctatgat-ttctttttcagattattcattataaggggataggagcaaaatttattttccccttctcccaacctccagctctgggtaacctctattctattgtctgtctctattaacttgctttttctaggtgtctcatagaagtgcaatcatagaatagacgaccttttctgtctggcttcttttgcttagagcttaatgtcttcaaggtccatccatgttggaataagtatcagaacattct--tttttagagctgagttatattccattttatggatacatcatattttattcaat-----atttgttgatgagcactct-ggttatttcaccttttggctattgtgaataatgatgcaatgcacatttacatgcacatatctgttcgagtccctttt-----tta-tttt--ttggaatacccattaggagtgaatgtgctaggccatatcataactctg--tttaactttcttaaggaattgctcatctgttttccacagcacctatact-tgtttacattc----------------caa-------ccatcaatgaaggttccagt-ttctccacatc---------------ctcaccaatgtttttc----------------------------------------ttttctcctttttcaaat--attacagcca-----ttgtagtag--------------------gtgtgaagtggtatct--cattttgagggttttgtttgtttgtttgcatttccccagtgattgatgatgtgatgcatcttaccctgtgttaaggggtcatctgtgtgtctcctttggagaaac------ttaagtcctctgccca-tttttaaagtggattatttggttttt-ttgttgttgttgatgtgtaggagttcttgacatattatggatattaaattcttctaagatacatgatgtataaatattttcttccattctatagttcatcttttctcactctcttgaaaatgtccttcgatgcacaaaag-ttttttattttgatcaagtccactttcatctcttttctcttttgct-g i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1356250 1117 + 3644372 cttaataa---tatgccttccaacccataaatatgggatgcctttccatttattggtgtcttcattactttcttttaacaatttattttagttttcgttctacaagacctttgcatccatggttaagttcattccttagcattttattttttcatcctattgtaaatgggattgtttctatgat-ttctttttcagattattcattataaggggataggagcaaaatttattttccccttctcccaacctccagctctgggtaacctctattctattgtctgtctctatgaacttgctttttctaggtgtctcatagaagtgcaatcatagaatagacgaccttttctgtctggcttcttttgcttagagcttaatgtcttcaaggtccatccatgttggaataagtatcagaacattct--tttttagagctgagttatattccattttatggatacatcatattttattcaat-----atttgttgatgagcactct-ggttatttcaccttttggctattgtgaataatgatgcaatgcacatttacatgcacatatctgttcgagtccctttt-----tta-tttt--ttggaatacccattaggagtgaatgtgctaggccatatcataactctg--tttaactttcttaaggaattgctcatctgttttccacagcacctatact-tgtttacattc----------------caa-------ccatcaatgaaggttccagt-ttctccacatc---------------ctcaccaatgtttttc----------------------------------------ttttctcctttttcaaat--attacagcca-----ttgtagtag--------------------gtgtgaagtggtatct--cattttgagggttttgtttgtttgtttgcatttccccagtgattgatgatgtgatgcatcttaccctgtggtaaggggtcatctgtgtgtctcctttggagaaac------ttaagtcctctgccca-tttttaaagtggattatttggttttt-ttgttgttgttgatgtgtaggagttcttgacatagtatggatattaaattcttctaagatacatgatgtataaatattttcttccattctatagttcatcttttctcactctcttgaaaatgtccttcgatgcacaaaag-ttttttattttgatcaagtccactttcatctcttttctcttttgct-g i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1310027 1121 - 10304083 cttaataatactatgccttccaacccataaatatgggatgcctttccatttattggtgtcttcattactttcttttaataatttattttagttttcattctacaagacctttgcatccatggttaagttcattccttagcattttattttttcatcctattgtaaatgggattgtttctatgat-ttctttttcagattattcattataaggggataggagcaaaatttattttccccttctcccaacctccagctctgggtaacctctattctattgtctatctctatgaatttgctttttctaggtgtctcatagaagtgcaatcatagaatagacgaccttttctgtctggcttcttttgcttagagcttaatgtcttcaaggtccatccatgttggaataagtaccagaacgttct--tttttagagctgagttatattccattttatggattcatcatattttattcaat-----atttgttgatgagcactctgggttatttcaccttttggctatcgtgaataatgatgcaatgcacatttacatgcacgtatctgttcgagtccctttt-----tta-tttt--ttggaataccca-taggagtgactttgctaggccatgtcataactctg--tttaactttcttaaggaattgctcctctgttttccacagcacctatact-tgtttacattc----------------caa-------ccatcagtgaaggttccagt-ttctccacatc---------------ctcaccaatgtttttc----------------------------------------ttttctcctttttcaaat--actacagcca-----ttgtagtag--------------------gtgtgaagtggcatct--cattttgagggttttgtttgtttgtttgcatttccccagtgattgatgatgtgacgcatcttaccctgtgttaaggggtcatctgtgtgtctcctttggagaaac------ttaagtcctctgccca-tttttaaagtggattgtttgttttttgttgttgttgttgatgtgtaggagttcttgacatattatggatattaaattcttctaagatacatgatgtataaatattttcttccattctatagttcatcttttctcactctcttgaaaatgtccttcgatgcacaaaag-ttttttattttgatcatgtccactttcatctcttttctcttttgct-g i cerAty1.NW_012000820v1 I 352 C 0 s chlSab2.chr14 1379350 1115 - 107702431 cttaataatattatgccttccaacccataaatatgggatgcctttccatttattggtgtcttcattactttcttttaacaatttattttagttttcattctacaagacctttgcatccatggttaagttatttccttagcattttattttttcatcctattgtaaatgggattgtttctatgat-ttctttttcagattattcattataaggggataggagcaaaatttattttccccttctcccaacctccagctctggctaacctctattctattgtctatctctatgaatttgctttttctaggtgcctcatagaagtgcaatcgtagaatagatgaccttttctgtctggcttcttttgcttagagcttaatgtcttcaaagtccatccatgttggaataagtatcagaacattct--tttttagagctgagttacattccattttatggatacattatattttattcaat-----atttgttgatgagcactctgggttatttcaccttttggctattgtgaataatgatgcagtgcacatttacatgcacatatctgttcgagtccctttc-----tta-tttt--ctggaatacccgttaggagtgaatttgctaggccatatcat-----ta--tttaactttcttaaggaattgctcatctgttttccacagcacctatact-tgtttacattc----------------cag-------ccgtcaatgaaggttccagc-ttctccacatc---------------ctcaccaatgtttttc----------------------------------------ttttctcctttttcaaat--attacagcca-----ttgtagtag--------------------gtgtgaattggtatct--cattttgagggttttgtttgtttgtttgcatttccccagtgattgatgatgtgatgcatcttaccctgtgttaaggggtcatctgtgtgtctcctttggagaaac------ttaagtcctctgccca-tttttaaagtggattatttggttttg-ttgttgttgttgatgtgtaggagttcttgacatattatggat-ttaaattcttctaagatacatgatgtataaatattttcttccattctatagttcatcttttcttactctcttgaaaatgtccttcgatgcacaaaag-ttttttattttgatcaagtccactttcatctcttttctcttttgct-g i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 859190 1122 - 2200435 cttaataatattatgccttccaacccataaatatgggatgcctttccatttattggtgtcttcattactttcttttaacaatttattttagttttcattctacaagacctttgcatccatggttaagttctttccttagcattttattttttcatcctattataaatgggattgtttctatgat-ttctttttcagattattcattataaggggataggagcaaaatttattttccccttctcccaacccccagctctgggtaacctctattctattgtctctctctatgaacttgctttttctaggtgcctcatagaagtgcagtcgtagaatagacgaccttttctgtctggcttcttttgcttagagcttaatgtcttcaaggtccatccatgttggaataagtatcagaacgttct--gttttagagctgagttatattccgttttatggatacatcatattttattcaat-----atttgttgatgagcactctgagttatttcaccttttggctattgtgaataatgatgcaatgcacatttacatgcacatgtctgttcgagtccctttt-----ttattttt--ttggaatacccattaggagtgaatttgctgggccatatcataactctg--tttaactttcttaagcaattgctcatctgttttccacagcacctgtact-tgttcacattc----------------caa-------ccatcagtgaaggttccagt-ttctccacatc---------------ctcaccaatgttgttc----------------------------------------ttttctcctttttcaaat--actacagcca-----ttgtagtag--------------------gtgtgaagtggcatct--cattttgagggttttgtttgtttgtttgcatttccccagtgattgatgatgtgatgcatcttaccctgtgttaaggggtcacctgtgtgtctcctttggagaaac------ttaagtcctctgccca-tttttaaagtggattatttgtttttg-ttgttgttgttgatgtgtaggagttcttgacatattatggatattaaattcttctaagatacatgatgtataaatattttcttccattctatagttcatcttttctcactctcttgaaaatgtccttcgatgcacaaaag-ttttttattttgatcaagtccgctttcatctcttttctcttttgct-g i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1296998 1130 - 13651311 cttaataatattatgccttccaacccataaatatgggatgcctttccatttattggtgtcttcattactttcttttaacaatttattttagttttcattctacaagacctttgcatccatggttatgttcattccttagcattttattttttcatcctattgtaaatgggattgtttctatgat-ttctttttcagattattcattataaggggatagaaacaaaatttattttccccttctcccaacccccagctctgggtaacctctattctattatctatctctatgaatttgctttttctaggtgcctcatagaagtgcaatcgtagaatagatgaccttttctgtctggcttcttttgcttagagcttaatgtcttcaaggtccatccgtgttggaataagtatcagaacattct--tttttagagctgagttatattccattttatggatacatcatattttattcagt-----atttgttgatgagcactctggtttatttcaccttttggctattgtgaataatgatgcaatgcacatttacatgcacatgtctgttcgagtccctttt-----tta-tttt--ttggaataccca-taggagtgaatttgttaggccatatcataactcta--tttaactttcttaaggaattgctcatctgttttccacagcacctatact-tgtttacattc----------------caa-------ccatcaatgaaggttccagt-ttctccgcatcccccgcatccagtttctcaccaatgtttttc----------------------------------------ttttctccttttcaaaat--attacagccg-----ttgtagtag--------------------gtgtgaagtggtatcg--cattttgagggttttgtttgtttgtttgcatttccccagtgattgatgatgtggcgcatcttaccctgtgtcaaggggtcatctgtgtgtctcctttggagaaac------ttaagtcctgtgccca-tttttaaagtggattgtttgtttttt-----tgttgttgatgtgtaggagttcttgacatattatggatattaaattattctaagatacatgatgtgtaaatattttcttccattctatagttcgtcttttctcactctcttgaaaatgtccttcgatgcacaaaag-ttttttattttgatcaagtccacttt-atctctgttctcttttgct-a i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 892078 1152 + 5252280 -----gaaggtaaagcttttcaaaccatgaactgggggcatcgtcgtgtttgttgttgtcttcatta------gacagcaatggtttgtaattttcaaagtacaagtactttgcctccttggctaagttctctcctaagtattttatgcttttgctgttatgtaagcggaattgttttcttaatgtgctttttcagtctgctcattgcaagaggacagaaacacacctgagttt-ccctccccacag----tagccctggg-aagctctgttctactttcc-tctctgtgaattccc-------------ctcacacaagtgggaccatacagaaagcggcctcttctatttggcccccc---actgaagtggcat---ttcatagtacatgcacattggaacaggtgctagaaatttcttctttttatagctgaataatatttcatttaa--gatgca--atgttttatttatccatcaatttcttgatgaacagta--aactatttcacccttcagctgctgtgagccatgccatagtccttcttggtgtggaaacatccgtctgtgtccttgtttatgatta-ttgtggctgtagtcc----taggactgggactgttgggt-gtgtggaaaccccatttttaactttcttgagaaactactcaactgttttccacaatagctgtaccatttttacattcAGTTACAGTAGATATGCAGTAGTGCCTCACCAGGGATTGTCCTAACACTCCCCAAATG---------------ATCAGTGATGTCCACCATCTAATGATCAGTGATGTCCACCATCTAATGATCAGTGATGTCCACCATCTAATGATCAGTGATGTCCACCatcttacagtagtttctcttagcactcccctaatgagcagtgatgtccagcatcttacag---tagtttgtc--ttagccctcccccaatgatcaatattgtccagcatcttgtggagcactttttggccatctgtagatcttctgtggagaaatgtcatgtcaagttct-tgcttatttttttaagtggctttctttgtcttt-tg-----ttgtgaagcatagcagttcttagtatattct-------------ttatggaatatacaacttgc-aatatttctcccc------------ttcttttcatactctcttgaaaatcttctttgattcac--aag-tttttaatgttgatcaagtccagtgt-atctatttttactcttgGTAG i otoGar3.GL873658 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e dasNov3.JH576208 1569399 123 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C a score=2587994.000000 s hg38.chr2_KI270774v1_alt 24017 387 + 223625 tttgACAGCAGTGTTTTAAACTCCCTAATGCATGATACAAAACAATCACTTACCAGAGTTATCTAACATGTGCTAGTTGGGGCTGGAGCCACCTTGAATTCTCA--CTTCAGTTCTCACATTGATAGAAGGAATGGTTTGTAGCTGTTTTTATATTTTTCCAGACTCCAGGAGGAGGGCTTCCTGCCAGTTTTCCCTCAAATTGAGTGGAAGCCTTGTCACATCTCATCAGTAAAAAGACTTGCTCATTGTGAG-GG-------CTGATTATTTC------------TCTGATGTGTGAATCTTAAGCTGATGAATATCAAGAGGAAAATGTAAACCCTTCTGCCACACCACAGTAGAG-GAAGCCA---TAACTGCCTAACCCACAGAAACAAATACATTCCACTGCAGCCC s panTro5.chr2A 1303817 356 + 111504155 tttgACAGCAGTGTTTTAAACTCCCTAATGCATGATACAAAACAATCACTTACCAGAGTTATCTAACATGTGCTAGTTGGGGCTGGAGCCACCTGGAATTCTCA--CTTCAGTTCTCACATTGATAGAAGGAATGGTTTGTAGCTGTTTTTATATTTTTCCAGACTCCAGGAGGAGGGCTTCCT-------------------------------TGTCACATCTCATCAGTAAAAAGACTTGCTCATTGTGAG-GG-------CTGATTATTTC------------TCTGATGTGTGAATCTTAAGCTGATGAATATCAAGAGGAAAATGTAAACCCTTCTGCCACACCGCAGTAGAG-GAAGCCG---TAACTGCCTAACCCACAGAAACAAATACATTCCACTGCAGCCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1264732 356 + 114371477 tttgACAGCAGTGTTTTAAACTCCCTAATGCATGATACAAAACAATCACTTACCAGAGTTATCTAACATGTGCTAGTTGGGGCTGGAGCCACCTGGAATTCTCA--CTTCAGTTCTCACATTGATAGAAGGAATGGTTTGTAGCTGTTTTTATATTTTTCCAGACTCCAGGAGGAGGGCTTCCT-------------------------------TGTCACATCTCATCAGTAAAAAGACTTGCTCATTGTGAG-GG-------CTGATTATTTC------------TCTGATGTGTGAATCTTAAGCTGATGAATATCAAGAGGAAAATGTAAACCCTTCTGCCACACCGCAGTAGAG-GAAGCCG---TAACTGCCTAACCCACAGAAACAAATACATTCCACTGCAGCCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1290543 387 + 1464242 tttgACAGCAGTGTTTTAAACTCCCTAATGCATGATACAAAACAATCACTTACCAGAGTTATCTAACATGTGCTAGGTGGGGCTGGAGCCACCTTGAATTCTCA--CTTCAGTTCTCACATTGATAGAAGGAATGGTTTGTAGCTGTTTTTATATTTTTCCAGACTCCAGGAGGAGGGCTTCCTGCCAGTTTTCCCTCAAATTGAGTGGAAGCCTTGTCACATCTCATCAGTAAAAAGACTTGCTCATTGTGAG-GG-------CTGATTATTTC------------TCTGATGTGTGAATCTTAAGCTGATGAATATCAAGAGAAAAATGTAAACCTTTCTGCCACACCACAGTAGAG-GAAGCCA---TAACTGCCTAACCCACAGAAACAAATACATTCCACTGCAGCCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1021530 387 + 81552678 tttgACTGCAGTGTTTTAAACTCCCTAATGCATGATACAAAACAATCACTTACCAGAGTTATCTAACATGTGCTAGTTGGGGCTGGAGCCACCTTGAATTCCCA--CTTCAGTTCTCACATTGGTATAAGGAATGGTTTGTAGCTGTTTTTATATTTTTCCAGACTCCAGGAGGAGGGCTTCCTGCCAGTTTTCCCTCAAATTGAGTGGAAGCCTTGTCACATCTCATCAGTGAAAAGACTTGCTCATTGCGAG-GG-------CTGATTATTTC------------TCTGATGTGTGAATCTTAAGCTGATGAATATCAAGAGGAAAATGTAAACCCTTCTGCCACACCGCAGTAGAG-GAAGCCA---TAACTGCCTAACCCACAGAAACAAATATATTCCACTGCAGCCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1357070 387 + 108979918 tttgGCAGCAGTGTTTTAAACTCCCTAATGCGTGATACAAGACAGTCACTTACCAGAGTTATCTAACATGTGCTAGTTGGGGCTGGAGCCACCTTGAATTCCCA--CTTCAGTTCTCACACTGATATAAGGAATGGTTTGTAGCTGTTTTTATATTTTTCCAGACTCCAGGAGGAGGGCTTCCTGCCAGTTTTCCCTCAAGTTGAGTGGAAGGCTTGTCACACCTCATCAGTAAAAAGATTTGCTCATTGTGAG-GG-------CTGGTTATTTC------------TCTGATGTGTGAATCTTAAGCTGATGAATATCAAGAGGAAAATGTAAACCCTTCTGCCACACCACAGTAGAG-GAAGCCG---TAACTGCTTAACCCACAGAAACAAACACATTCCACTGCAGCCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1329251 387 - 111193037 tttgGCAGCAGTGTTTTAAACTCCCTAATGCGTGATACAAGACAGTCACTTACCAGAGTTATCTAACATGTGCTAGTTGGGGCTGGAGCCACCTTGAATTCCCA--CTTCAGTTCTCACATTGATATAAGGAATGGTTTGTAGCTGTTTTTATATTTTTCCAGACTCCAGGAGGAGGGCTTCCTGCCAGTTTTCCCTCAAGTTGAGTGGAAGGCTTGTCACACCTCATCAGTAAAAAGATTTGCTCATTGTGAG-GG-------CTGGTTATTTC------------TCTGATGTGTGAATCTTAAGCTGATGAATATCAAGAGGAAAATGTAAACCCTTCTGCCACACCACAGTAGAG-GAAGCCG---TAACTGCTTAACCCACAGAAACAAACACATTCCACTGCAGCCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1357367 387 + 3644372 tttgGCAGCAGTGTTTTAAACTCCCTAATGGGTGATACAAGACAGTCACTTACCAGAGTTATCTAACATGTGCTAGTTGGGGCTGGAGCCACCTTGAATTCCCA--CTTCAGTTCTCACATTGATATAAGGAATGGTTTGTAGCTGTTTTTATATTTTTCCAGACTCCAGGAGGAGGGCTTCCTGCCAGTTTTCCCTCAAGTTGAGTGGAAGGCTTGTCACACCTCATCAGTAAAAAGATTTGCTCATTGTGAG-GG-------CTGGTTATTTC------------TCTGATGTGTGAATCTTAAGCTGATGAATATCAAGAGGAAAATGTAAACCCTTCTGCCACACCACAGTAGAG-GAAGCCG---TAACTGCTTAACCCACAGAAACAAACACATTCCACTGCAGCCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1311148 387 - 10304083 tttgGCAGCAGTGTTTTAAACTCCCTAATGTGTGATACAAGACAGTCACTTACCAGAGTTATCTAACATGTGCTAGTTGGGGCTGGAGCCACCTTGAATTCCCA--CTTCAGTTCTCACATTGATATAAGGAATGGTTTGTAGCCGTTTTTATATTTTTCCAGACTCCAGGAGGAGGGCTTCCTGCCAGTTTTCCCTTAAGTTGAGTGGAAGGCTTGTCACACCTCATCAGGAAAAAGATTTGCTCCTTGTGAG-GG-------CTGGTTACTTC------------TCTGATGTGTGAATCTTAAGCTGATGAATATCAAGAGGAAAATGTAAACCCTTCCGCCACACCACAGTAGAG-GAAGCCG---TAACTGCTTAACCCACAGAAACAAACACATTCCACTGCAGCCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1380465 387 - 107702431 tttgGCAGCAGTGTTTTAAACTCCCTAATGCGTGATACAAAACAGTCACTTACCAGAGTTATCTAACATGTGCTAGTTGGGGCTGGAGCCACCTTGAATTCCCA--CTTCAGTTCTCACATTGATATAAGGAATGGTTTGTAGCTGTTTTTATATTTTTCCAGACTCCAGGAGGAGGGCTTCCTGCCAGTTTTCCCTCAAGTTGAGTGGAAGGCTTGTCACACCTCATCAGTAAAAAGATTTGCTCATTGTGAG-GG-------CTGGTTATTTC------------TCTGATGTGTGACTCTTAAGCTGATGAATATCAAGAGGAAAATGTAAACCCGTCCGCCACACCACAGTAGAG-GAAGCCG---TAACTGCTTAACCCACAGAAACAAACACATTCCACTGCAGCCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 860312 387 - 2200435 tttgGCAGCAGTGTTTTAAACTCCCTAATGTGTGATACAAGACAGTCACTTACCAGAGTTATCTAACATGTGCTAGTTGGGGCTGGAGCCACCTTGAATTCCCA--CTTCAGTTCTCACATTGATATAAGGAATGGTTTGTAGCTGTTTTAATATTTTTCCAGACTCCAGGAGGAGGGCTTCCTGCCAGTTTTCCCTCAAGTTGAGTGGAAGGCTTATCACACCTCATCAGTAAAAAGATTTGCTCCTTGTGAG-AG-------CTGGTTACTTC------------TCTGATGTGTGAATCTTAAGCTGATGAATATCCAGAGGAAAATGTAAACCGTTCCGCCACACCACAGTAGAG-GAAGCCG---TAACTGCTTAACCCACAGAAACAAACACATTCCACTGCAGCCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1298128 386 - 13651311 tttgGCAGCAGTGTTTTAAACTCCCTAATGCGTGATACAAAACAGTCACTTACCAGAGTTATCTAACACGTGCTAGCTGGGGCTGGAGCCACCTTGAATTCCCA--CTTCAGTTCTTGCATTGATATAAGGAATGGTTTGTAGCTGTTTTTATGTTTTTCCAGACTCCAGGAGGACGGCTTCCTGCCGGTTTTCCCTCAAGTTGGGTGGAAGGCTTGTCACACCTCA-CAGTAAAAAGATGTGCTCATTGTGAG-GG-------CTGGTTATTTC------------TCTGATGTGTGAATCTTAAGCTGATGAATATCAAGAGGAAAATGTAAACCCTTCCGCCACACCACAGTAGAG-GAAGCCG---TAACTGCTCAACCCACAGAAACAAACACATTCTCCTGCAGCCC i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 893230 377 + 5252280 TTTGACAGCCATGATCTAAACTGCTTAATTCATGATATGAACCAAACATTTACCACAGTTAACTAAC-TATGGTAGCCTCAGCTGGAGCTCCCTGAAACTCCTG--TGTAAGTACTCTCAGTGACATAAAGAAGGGTTTATGGCTGTTCTTGCGTTTTCTCAAACTACAGTATAAGGGCCTTTTGCCAATTTGTCTTCAAACTGAGCAGAATACTTGTCACATCTCATCAGTAAAAAGATTTGTGCATTATGAGTGG-------TAGGTTTTTTT------------TTTTATCTCTGAATTTTAAGCT----AATATCAAGAGAAAAATGTAAACACTTCTGCTTCACCTCAGTAGAG-CAAGCAGAGATTACTGCTAAATCCCCAA--------ACGTCCCAGTGCAACC- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1569522 409 + 4416731 ttccacagcTATGTTTTAAGCTTTCTAACGCATGATACAAAGCAAACATTTGCCGTAGTTGACTTATTTGTGGGAGCCTCAGCTGGAACCACCTTTAAATTCCAACTTTAAGTGCTCACATTTACATAAGGAATTGTTTATAGCTGTTTCAGTATTTTTCCAGATTACAGCATGAGGACTCCTTGCCAGTTTGCCTTCAAATTGAGTGGAAGGCTTGTCACATCTCATAAGTAAAAAGATGCGCAGATTGTGAG-GGAAAGGTTTTTGTTTTTTCAGTTCTTTTCTTTTTCATCTGTGATTTTTAAATTGATGAATATCAAGAGGAAAATACAAACCCCAGTGTTGTACCTCAGCTGAGCTTAACAA---CGACTGTTTAAATACAAGAAGACAAAGAATTTCACTTTAGCCC i dasNov3.JH576208 I 123 I 1622 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e calJac3.chr14 1310251 0 - 108792865 C a score=50435.000000 s hg38.chr2_KI270774v1_alt 24404 9 + 223625 AAGAGCTGT s panTro5.chr2A 1304173 9 + 111504155 AAGAGCTGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1265088 9 + 114371477 AAGAGCTGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1290930 9 + 1464242 AAGAGCTGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1021917 9 + 81552678 AAGAGCTGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1357457 9 + 108979918 AAGAGCTAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1329638 9 - 111193037 AAGAGCTAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1357754 9 + 3644372 AAGAGCTAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1311535 9 - 10304083 AGGAGCTGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1380852 9 - 107702431 AAGAGCTGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 860699 9 - 2200435 AGGAGCTGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1298514 9 - 13651311 AAGAGCTGT i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 893607 0 + 5252280 C e dasNov3.JH576208 1569931 1622 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C a score=1979965.000000 s hg38.chr2_KI270774v1_alt 24413 332 + 223625 GCACTGGCATCTGCATACAGGCTGGAGACAAGA--TGGTCAG----GTGGGGG-AAAGGGCA-----G-------------------------------------------------CACCCCCTGTCCCTATGCTAACGACCAAATGAGAGTATTGGCTGCTGCAGCACTCCCGGATCTGCAGACTAGAAACTGCTTAAGGCCTCGCACCGTCCGCTCA-CTGGCCGCATCGAACTGAAATCAAGCTGGGATGCAGCACAGGCTGCTTCCGGGTGCTCCCAGAG--GGGTGGAAGCTC--------TGTGGAGGCACAG-------AAGAGGCACC------GAGGCACTCGCCTCCCTCTCCATGGCCTCTGACAATTTTCTGTATGTTCCCAAGG---TCTTCTCTCTCCTCCCCAC s panTro5.chr2A 1304182 332 + 111504155 GCACTGGCACCTGCATACAGGCTGGAGACAAGA--TGGTCAG----GTGGGGG-AAAGGGCA-----G-------------------------------------------------CATCCCCCGCCCCTATGCTAACGACCAAATGAGAGTATTGGCTGCTGCAGCACTCCCGGATCTGCAGACTAGAAACTGCTTAAGGCCTCGCACCGTCCGCTCA-CTGGCCGCATCGAACTGAAATCAAGCTGGGATGCAGCACAGGCTGCTTCCGGGTGCTCCCAGAG--GGGTGGAAGCTC--------TGTGGAGGCACAG-------AAGAGGCACC------GAGGCACTCGCCTCCCTCTCCATGGCCTCTGACAATTTTCTGTATGTTCCCAAGG---TCTTCTCTCTCCTCCCCAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1265097 332 + 114371477 GCACTGGCACCTGCATACAGGCTGGAGACAAGA--TGGTCAG----GTGGGGG-AAAGGGCA-----G-------------------------------------------------CATCCCCCGCCCCTATGCTAGCGACCAAATGAGAGTATTGGCTGCTGCAGCACTCCCGGATCTGCAGACTAGAAACTGCTTAAGGCCTCGCACCGTCCGCTCA-CTGGCCGCATCGAACTGAAATCAAGCTGGGATGCAGCACAGGCTGCTTCCGGGTGCTCCCAGAG--GGGTGGAAGCTC--------TGTGGAGGCACAG-------AAGAGGCACC------GAGGCACTCGCCTTCCTCTCCATGGCCTCTGACAATTTTCTGTATGTTCCCAAGG---TCTTCTCTCTCCTCCCCAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1290939 332 + 1464242 GCACTGGCACCTGCATACAGGCTGGAGACAAGA--TGGTCAG----GTGGGGG-AAAGGGCA-----G-------------------------------------------------CACCCCCCACCCCTATGCTAACGACCAAATGAGAATATTGGCTGCTGCAGCACTCCCAGATCTGCAGACTAGAAACTGTTTAAGGCCTCTCACCGTCCGCTCA-CTGGCCGCATCGAACTGAAATCAAGCTGGGATGCAGCACAGGCTGCTTCCGGGTGCTCCCAGAG--GGGTGGAAGCTC--------TGTGGAGGCACAG-------AAGAGGCACC------GAGGCACTCGCCTCCCTCTCCATGGCCTCTGACAATTTTCTGTATGTTCCCAAGG---TCTTCTCTCTCCTCCCCAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1021926 332 + 81552678 GCGCTGGCACCTGCATACAGGCTGGAGACAAGA--TGGTCAG----CTGGGGG-AAAGGGCA-----G-------------------------------------------------CACCCCCCACCCCCATGCTAACCACCAAATGAGAGTATTGGCTGCTGCAGCACTCCCGGATCTGCAGACTAGAAACTGCTTAAGGCCTCGCACCATCCACTCA-CTGGCCGCATCGAACTGGAATCAAGCTGGGATGCAGCACAGGCTGCTTCCAGGTGCTCCCAGAG--GGGTGGAGGCTC--------TGTGGAGGCACAG-------AAGAGGCACC------GAGGCACTCACCTCCCTCTCCATGGCCTCTGACAATTTTCTGTACATTCCCAAGG---TCTTCTCTCTCCTCTCCAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1357466 329 + 108979918 GCGCTGGCACCTGCATACAGGCTGGAGACAAGA--TGGTCAG----GTGGGGG-AAAGGGCA-----G-------------------------------------------------CACCCCCTGCCCCCATGCTAATGGCCAAATGAGAGTATTGGCTGCTGCATCACTCCCTGATCTGCAGACTAGAAACTGCTTAAGGCTTTGCACCATCCATACA-CCGGCCACATTGAACCGGAATCAAGCTGGGATGCAGCACAGGCTGCTTCCGGGAGCTCCCAGA---GGGTGGAGGCTC----------TGGAGGCACAG-------AAGAGGCACC------GAGGCACTCGCCTCCCTCTCCATGGCCTCTGTCAATTTTCTGTGTGTTCCCAAGG---TCTTCTTTCTCCTCCCCAC i rheMac8.chr13 C 0 I 17 s macFas5.chr13 1329647 329 - 111193037 GCGCTGGCACCTGCATACAGGCTGGAGACAAGA--TGGTCAG----GTGGGGG-AAAGGGCA-----G-------------------------------------------------CACCCCCTACCCCCATGCTAATGGCCAAATGAGAGTATTGGCTGCTGCATCACTCCCTGATCTGCAGACTAGAAACTGCTTAAGGCTTTGCACCATCTGTACA-CCGGCCACATCGAACCGGAATCAAGCTGGGATGCAGCACAGGCTGCTTCCGGGAGCTCCCAGA---GGGTGGAGGCTC----------TGGAGGCACAG-------AAGAGGCACC------GAGGCACTCGCCTCCCTCTCCATGGCCTCTGTCAATTTTCTGTGTGTTCCCAAGG---TCTTCTTTCTCCTCCCCAC i macFas5.chr13 C 0 I 17 s macNem1.NW_012011978v1 1357763 329 + 3644372 GCGCTGGCACCTGCATACAGGCTGGAGACAAGA--TGGTCAG----GTGGGGG-AAAGGGCA-----G-------------------------------------------------CACCACCTGCCCCCATGCTAATGGCCAAATGAGAGTATTGGCTGCTGCATCACTCCCTGATCTGCAGACTAGAAACTGCTTAAGGCTTTGCACCATCCGTACA-CCGGCCACATCGAACCGGAATCAAGCTGGGATGCAGCACAGGCTGCTTCCGGGAGCTCCCAGA---GGGTGGAGGCTC----------TGGAGGCACAG-------AAGAGGTACC------GAGGCACTCGCCTCCCTCTCCATGGCCTCTGACAATTTTCTGTGTGTTCCCAAGG---TCTTCTTTCTCCTCCCCAC i macNem1.NW_012011978v1 C 0 I 14 s cerAty1.NW_012000820v1 1311544 329 - 10304083 GCGCTGGCACCTGCATACAGGCTGGAGACAAGA--TGGTCAG----GTGGGGG-AAAGGGCA-----G-------------------------------------------------CACCCCCCGCCCCCATGCTAATGGCCAAATGAGAGTATTGGCTGCTGCATCACTCCCTGATCTGCAGACTAGAAACTGCTTAAGGCTTTGCACCATCCGCACA-CTGGCCACATCGAACCAGAATCAAGCTGGGATGCAGCACAGGCTGCTTCCGGGAGCTCCCAGA---GGGTGGAGGCTC----------TGGAGGCACAG-------AAGAGGCACC------GAGGCACTCGCCTCCCTCTCCATGGCCTCTGACAATTTTCTGTGTGTTCCCAAGG---TCTTCTTTCTCCTCCCCaa i cerAty1.NW_012000820v1 C 0 I 17 s chlSab2.chr14 1380861 377 - 107702431 GCGCTGCCACCTGCATACAGGCTGGAGACAAGA--GGGCCAG----GTGGGGG-AAAGGGCA-----GCACCCCTGCCCCCGTGCTAATGGCCACCCCCTGCCCCCGTGCTAATGGCCACCCCCTGCCCCCGTGCTAATGGCCAAATGAGAGTATTGGCTGCTGCGTCACTCCCTGATTTGCAGGCTAGAAGCTGCTTAAGGCTTCGCACCATCCGCACA-CCGGCCACATGGAACCGGAATCAGGCTGGGATGCAGCACAGGCTGCTT-CGGGAGCTCCCAGA---GGGTGGAGGCTC----------TGGAGGCACAG-------AAGAGGCACT------GAGGCACTCGCCTGCCTCTCCATGGCCTCTGACAATTTTCTGTGTGTTCCCAAGG---CCTTCCTTCTCCTCCCCAC i chlSab2.chr14 C 0 I 325 s manLeu1.NW_012103754v1 860708 329 - 2200435 GCGCTGGCATCTGCATACAGGCTGGAGACAAGA--TGGTCAG----GTGGGGG-AAAGGGTA-----G-------------------------------------------------CACCCCCCGCCCCCATGCTAATGGCCAAATGAGAGTATTGGCTGCTGCATCACTCCCTGATCTGCAGACTAGAAACTGCTTAAGGCTTTGCACCATCCGCACA-CCGGCCACATCGAACCGGAATCAGGCTGGGATGCAGCACAGGCTGCTTCCGGGAGCTCCCAGA---GGGTGGAGGCTC----------TGGAGGCACAG-------AAGAGGCACC------GAGGCACTCGCCTCCCTCTCTATGGCCTCTGACAATTTTCTGTGTGTTCCCAAGG---TCTTCTTTCTCCTCCCCAC i manLeu1.NW_012103754v1 C 0 I 10 s colAng1.NW_012118821v1 1298523 330 - 13651311 GCGCTGGCACCTGCATACAGGCTGGAGACAAGA--TGGTCAG----GTGGGGG-AAAGGGCA-----G-------------------------------------------------CACCCCCTGCCCCCATGCTAATGGCCAAATGAGAGTATTGGCTGCTGCATCACTCCCTGATCTGCAGAGTAGAAACTGCTTAAGGCTTTGCACCATCCACACA-CTGGCCACATCGAACCGGAATCAAGCTGGGATGCAGCACAGGCTGCTTCCAGGAGCTCCCAGAT--GGGTGGAGGCTC----------TGGAGGCACAG-------AAGAGGCACT------GAGGCACTTGCCTCCCTCTCCATGGCCTCTGACAATTTTCTGTGTGTTCCCAAGG---TCTTCTTTCTCCTCCCCAG i colAng1.NW_012118821v1 C 0 I 13 s otoGar3.GL873658 893607 301 + 5252280 -------CACCTGCAAACAGGCTG-----------TGTTCAGACCAGCGGGGG-ACAGAGGACGGGTG-------------------------------------------------TACC----------AAGTTTGCTGAAAAGTCAGAGAATT---TGCTAAATTACTCCCCAACCTATAGGCTAGACATGGCTTAAGTCCATGCACCATCCTCCTACCTGGTCAC-------------CAAACCTGGGTCAACCACAGGCTGCTGCCGAG-GCTCCCAGAG--AGGAGGAGGTTG--------GGGGGAGATGCAGCTAACCCATGAGGACCC--------AGAACTGTCCTGCCTCCACGTCACCTCTGCCAATCTGCTGGATGCTTCCAAA------TCCTTTCTCTCCCCCAT i otoGar3.GL873658 C 0 I 26 s dasNov3.JH576208 1571553 336 + 4416731 GCACAAACAGCTGCATACAAATTGGACAGTAGAATGAGTGAG----GTGGGGATAGAGGGCAA----G-------------------------------------------------TACACCCC---------CTAATAGCTC--TGAGAATTTT-----CTAGATTATTCTCCAGTCTGTAGATAAGAAACTGCTTAAGGCCATGCG-CATCCTCTTA-AGCACTCCATCATATCTAGGTCATTCTGGGATAACATGCCAGTTGCTTCCAGAGAGTCAGTGAGCAGGGGGGAAGCTCCATCTAGATGTGGCTCCATGT-------AAG-GCCACCTGCAGAGCAGAGTGCACCCACCTCTCAGTTGCCTGTGACAATGTGGTGGATGTTCCTGAGGGCCTCTTCTCT-TTGTCCCCAC i dasNov3.JH576208 I 1622 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e calJac3.chr14 1310251 0 - 108792865 C a score=2737380.000000 s hg38.chr2_KI270774v1_alt 24745 413 + 223625 -----------AA-AAAACTGGAGCTAACAATTAA-AGC-AAATCCTCACATCTGTCTAAATTTACTGATTTAGGTAACAAAACTTGCAGACCTCAGAGACTGTGAATTTGGAGAAGTGACTTAAAGAA-CCGAGATGCCGGTT-GTTATTACCCTGGAAGAAGGGGTGGGAAGAGGAGTCTATGCAGACAGAGGGTGGACTTGGCATTTGAATAAATGAGA----TCATCACCCAACAGC--CCGATTACAAAACGCCATTCTTTATCCTTTCCAGGATAGAAAGGGCAAACATTTCATACTAATC--GAAGGAGAGATTCTTTTGCAAAGTGGGTCATTTTTCTTTTCCAGGTTCTGTAGAGCTGG-TT--CATGCTAGGAATTAATAAATACCAAATAACAAAATGTT-GTTGAAAATGGCGTCTCTCCAAAAAGATA s panTro5.chr2A 1304514 413 + 111504155 -----------AA-AAAACTGGAGCTAACAATTAA-AGC-AAATCCTCACATTTGTCTAAATTTACTGATTTAGGTAACAAAACTTGCAGACCTCAGAGACTGTGAATTTGGAGAAGTGACTTAAAGAA-CCGAGATGCCAGTT-GTTATTACCCTGGAAGAAGGGGTGGGAAGAGGAGTCTATGCAGACAGAGGGTGGACTTGGCATTTGAATAAATGAGA----TCATCACCCAACAGC--CCGATTACGAAACGCCATTATTTATCCTTTCCAGGATAGAAAGGGCAAACATTTCATAGTAATC--GAAGGAGAAATTCTTTTGCAAAGTGGGTCATTTTTCTTTTCCAGGTTCTGTAGAGCTGG-TT--CATGCTAGGAATTAATAAATAACAAATAACAAAATGTT-GTTGAAAATGGCGTCTCTTCAGAAAGATA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1265429 413 + 114371477 -----------AA-AAAACTGGAGCTAACAATTAA-AGC-AAATCCTCACATTTGTCTAAATTTACTGATTTAGGTAACAAAACTTGCAGACCTCAGAGACTGTGAATTTGGAGAAGTGACTTAAAGAA-CCGAGATGCCAGTT-GTTATTACCCTGGAAGAAGGGGTGGGAAGAGGAGTCTATGCAGACAGAGGGTGGACTTGGCATTTGAATAAATGAGA----TCATCACCCAACAGC--CCGATTACGAAACGCCATTATTTATCCTTTCCAGGATAGAAAGGGCAAACATTTCATAGTAATC--GAAGGAGAAATTCTTTTGCAAAGTGGGTCATTTTTCTTTTCCAGGTTCTGTAGAGCTGG-TT--CATGCTAGGAATTAATAAATAACAAATAACAAAATGTT-GTTGAAAATGGCGTCTCTTCACAAAGATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1291271 413 + 1464242 -----------AA-AAAACTGGAGCTAACAATTAA-AGC-AAATCCTCACATCTGTCTAAATTTACTGATTTAGGTAACAAAACCTGCAGACCTCAGAGACTGTGAATTTGGAGAAGTGACTTAAAGAA-TCGAGATGCTGGTT-GTTATTACCCTGGAAGAAGGGGTGGAAAGAGGAGTCTATGCAGACAGAGGGTGGACTTGGCATTTGAATAAATGAGA----TCATCACCCAACAGC--CCGATTACGAAACGCCATTATTTATCCTTTCCAGGATAGAAAGGGCAAACATTTCATACTAATC--AAAGGAGAAATTCTTTTGCAAAGTGGGTCATTTTTCTTTTCCACGTTCTGTAGAGCTGG-TT--CATGCTAGGAATTAATAAATACCAAATAACAAAATGTT-GTTGAAAATGGCGTCTCTTCAAAAAGATA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1022258 414 + 81552678 -----------AACAAAACTGGAGCTAACAATTAA-AGC-AGATCCTCACATCTGTCTAAATTTACTGATTTAGGTAACAAAACCTGCAGACCTCAGAGACTGTGAATTTGGAGAAGTGACTTTAAGAA-CCGAGATGCCGGTT-GTTATTACCCTGGAAGAAGGGGTGGGAAGAGGAGTCTCTGCAGACAGAGAGTGGACTTGGCATTTGAATAAATGAGA----TCATCACCCAACAGC--CCAATTACGAAACGCCATTATTTATCCTTTCCAGGATAGAAAGGGCAAACATTTCATACTAATC--GAAGGAGAAATTCTTTTGCAAAGTGGGTCATTTTTCTTTTCCAGGTTCTATAGAGCTGG-TT--CATGCTAGGAATTAATAAATACCACATAACAAAATGTT-GTTGAAAATGGCATCTCTTCAAAAAGATG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1357812 412 + 108979918 -----------AA-AAAACCGGAGCTAACAACTAA-AGC-AAATCCTCACCTCTGTCTAAATTTACTGATTTAGGTAACAAAACCTGCAGACCTCAGAGACTGTGAATTTGGAGAAGTGACTTAAAGAA-CCGAGATGCCGGTT-GTTATTACCCTGGAAGAAGGGGTGGGAAGAGGAGTCTATGCAGACAGAGGGTGGACTTGGCATTTGAATAAATGAGA----TCATCATGCAACAGC--CCGTTTATAATACACCATTATTTATCCTTTCCAGGATAGAAAGGGCAAACATTTCATACTAATC--GAAGGAGAAATTCTTTTGCAAAGTGGGTCATTTTTCTTTTCCAGGTTCTATAGAGCTGG-CT--CCTGCTAGGAATTAATAAATACCAAATAACAAAATATT-GTTG-AAATGGCATCTCTTCAAAAAGAGA i rheMac8.chr13 I 17 C 0 s macFas5.chr13 1329993 412 - 111193037 -----------AA-AAAACCGGAGCTAACAACTAA-AGC-AAATCCTCACCTCTGTCTAAATTTACTGATTTAGGTAACAAAACCTGCAGACCTCAGAGATTGTGAATTTGGAGAAGTGACTTAAAGAA-CCGAGATGCCGGTT-GTTATTACCCTGGAAGAAGGGGTGGGAAGAGGAGTCTATGCAGACAGAGGGTGGACTTGGCATTTGAATAAATGAGA----TCATCATGCAACAGC--CCGTTTATAATACACCGTTATTTATCCTTTCCAGGATAGAAAGGGCAAACATTTCATACTAATC--GAAGGAGAAATTCTTTTGCAAAGTGGGTCATTTTTCTTTTCCAGGTTCTATAGAGCTGG-CT--CCTGCTAGGAATTAATAAATACCAAATAACAAAATATT-GTTG-AAATGGCATCTCTTCAAAAAGAGA i macFas5.chr13 I 17 C 0 s macNem1.NW_012011978v1 1358106 412 + 3644372 -----------aa-aaaaCCGGAGCTAACAACTAA-AGC-AAATCCTCACCTCTGTCTAAATTTACTGATTTAGGTAACAAAACCTGCAGACCTCAGAGATTGTGAATTTGGAGAAGTTACTTAAAGAA-CCGAGATGCCAGTT-GTTATTACCCTGGAAGAAGGGGTGGGAAGAGGAGTCTATGCAGACAGAGGGTGGACTTGGCATTTGAATAAATGAGA----TCATCATGCAGCAGC--CCGTTTATAATACACCGTTATTTATCCTTTCCAGGATAGAAAGGGCAAACATTTCATACTAATC--GAAGGAGAAATTCTTTTGCAAAGTGGGTCATTTTTCTTTTCCAGGTTCTATAGAGCTGG-CT--CCTGCTAGGAATTAATAAATACCAAATAACAAAATATT-GTTG-AAATGGCATCTCTTCAAAAAGAGA i macNem1.NW_012011978v1 I 14 C 0 s cerAty1.NW_012000820v1 1311890 413 - 10304083 -----------aa-aaaCCCGGAGCTAACAACTAA-AGC-AAATCCTCACCTCTGTCTAAATTTACTGATTTGGGTAACAAAACCTGCAGACCTCAGAGATTGTGAATTTGGAGAAGTGACTTAAAGAA-CCGAGATGCCGGTT-GTTATTACCCTGGAAGAAGGGGTGGGAAGAGGAGTCTATGCAGACAGAGGGTGGACTTGGCATTTGAATAAATGAGA----TCATCATGCAACAGC--CCGTTTATAAAACACCATTATTTATCCTTTCCAGGATAGAAAGGGCAAACATTTCATACTAATC--GAAGGAGAAATTCTTTTGCAAAGTGGGTCATTTTTCTTTTCCAGGTTCTATAGAGCTGG-TT--CCTGCTAGGAATTAATAAATACCAAATAACAAAATATT-GTTGAAAATGGCATCTCTTCAAAAAGAGA i cerAty1.NW_012000820v1 I 17 C 0 s chlSab2.chr14 1381563 413 - 107702431 -----------AA-AAAACCGGAGCTAACAACTAA-AGC-AAATCCTCACCTCTGTCTAAATTTACTGATTTAGGTAACAAAACCTGCAGACCTCAGAGATTGTGAATTTGGAGAAGTGACTTAAAGAA-CCGAGATGCCGGTT-GTTATTACCCTGGAAGAAGGGGTGGGAAGAGGAGTCTATGCAAACAGAGGGTGGACTTGGCATTTGAATAAATGAGA----TCATCGCCCAACAGC--CTGTTTATAAAACGCCATTATTTATCCTTTCCAGGATAGAAAGGGCAAACATTTCATACTAATC--GAAGGAGAAATTCTTTTGCAAAGTGGGTCATTTTTCTTTTCCAAGTTCTATAGAGCTGG-TT--CCTGCTAGGAATTAATAAATACCAAATAACAAAACGTT-GTTGAAAATGGCATCTCTTCAAAAAGAGA i chlSab2.chr14 I 325 C 0 s manLeu1.NW_012103754v1 861047 413 - 2200435 -----------AA-AAACCCAGAGCTAACAACTAA-AGC-AAATCCTCGCCTCTGTCTAAATTTACTGATTTAGGTAACAAAACCTGCAGACCTCAGAGATTGTGAATTTGGAGAAGTGACTTAAAGAA-CCGAGATGCCGGTT-GTTATTACCCTGGAAGAAGGGGTGGGAAGAGGAGTCTATGCAGACAGAGGGTGGACTTGGCATTTGAATAAATGAGA----TCATCATGCAACAGC--CCGTTTATAAAACACCGTTATTTATCCTTTCCAGGATAGAAAGGGCAAACATTTCATACTAATC--GAAGGAGAAATTCTTTTGCAAAGTGGGTCATTTTTCTTTTCCAGGTTCTATAGAGCTAG-TT--CCTGCTAGAAATTAATAAATACCAAATAACAAAATATT-GTTGAAAATGGCATCTCTTCAAAAAGAGA i manLeu1.NW_012103754v1 I 10 C 0 s colAng1.NW_012118821v1 1298866 413 - 13651311 -----------aa-aaaaCTGGAGCTAACAACTAA-AGC-AAATCCTCACCTCTGTCTAAATTTACTGATTTAGGTAACAAAACCTGCAGACCTCAGAGATCATGAATTTGGAGAAGTGACTGAAAGAA-CCGAGATGCTGGTT-GTCATTACCCTGGAAGAAGGGGTGGGAAGAGGAGTCTATGCAGACAGAGGGTGGACTTGGCATTTGAATAAATGAGA----TCATCGCCCAACAGC--CCATTTACAAAACGCCATTATTTGTCCTTTCCAGGATAGCAAGGGCAAACATTTCATACTAATC--AAAGGAGAAATTCTTTTGCAAAGTGGGTCATTTTTCTTTTCCAGGTTCTATAGAGCTGG-TT--CCTGCTAGGAATTAGTAAATACCAAATAACAAAACGTT-GTTGAAAATGGCATCTCTTCAAAAAGAGA i colAng1.NW_012118821v1 I 13 C 0 s otoGar3.GL873658 893934 404 + 5252280 -----------AA-TAAATTGGAGTGTATAGGTAAGGGT-AAACCCTCA-ACCTGTCTGAATTTACTGATTGAG---ATAAAAACTGCCAGCCCCAGGGATTGCTAATTTGGAAAGATGATTCGAAGGA-CCAGGATGGCCTCC-ATGGTCACCCTGGAAGGAGTGG-----GGAGGGGTCTACACATACAGGGGATGGGC-AGGCACCTGAATAACCGAGGCTGCTCCTC-CCCAACTGCTGCCTGTTACTAAATGCCCTCACCATTCGTCTC--ACTTATGAAGAGCCA--AGTCTATGCTAATC--GAGGGAGAAACCCGTCTGCTAAGT-GGTCATATTTCTTCTCCACATTCTGTAAAGTTGGTTT--CCTGCTAGGattttataaattataaataa-aaaatGGT-GTCATATGTAGCATCTCTTCAGAGAGATA i otoGar3.GL873658 I 26 C 0 s dasNov3.JH576208 1571889 419 + 4416731 AAAAAAAAAAAAA-AAAACTGGAGTTAACAGTTAA-AACTGAAATCTCACATTTGTCTGAACTTACTAATTTAGGTAACATAA-TTGCTAGCCTCAGTGATTGTCAATTTGAAGAGGTGATTCAAAGAGCCCTGGATGTTCTTTAGCCATTACCCAGGAAAACAGAAGGAGATTGGTAGTTTATGTAGACA------------GGAACTGGAATAAATGAAA----CTGTGGCCAAGCAGC--CTGTTTATTAAATGCCATTATTACTCCTTCCAAGGATATGAGGAGCAAACATTTCATATTAATTGAGAAGTAGAAACTCTTGTACAAAATGGGTCATATTTCTTCTCGGTAATCTGAAGAACTGG-TTGCCTTACTGGGAGTTAATAATTATTAAATAACGAAGTACTAATTGTACATGGCATATCTTCAAAGAGATA i dasNov3.JH576208 C 0 I 820 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e calJac3.chr14 1310251 0 - 108792865 C a score=1374741.000000 s hg38.chr2_KI270774v1_alt 25158 214 + 223625 TGATCACCTCTATTCTTTCAATTGAAAAAGATTCTAATGTGAAATATCTCTAATGTAAGTGC---ATATGTTCACAAAAGTG-AGCCAGT--ACAA--------AAATAAAATGTTTGACATAAATGTGATTTGTCTTTCTAAAATTGAATGGTAGAATAGTGACATTTTATTATTATTTGCATTAATTATAAAAGCATCCTAGGTTTGCTATTATTTCACA-TTTTTT s panTro5.chr2A 1304927 214 + 111504155 TGATCGCCTCTATTCTTTCAACTGAAAAAGATTCTAATGTGAAATATCTCTAATGTAAGTGC---ATATGTTCACAAAAGTG-AGCCAGT--ACAA--------AAATAAAATGTTTGACATAAATGTGATTTGTCTTTCTAAAATTGAATGGTAGAATAGTGACATTTTATTATTATTTGCATTAATTATAAAAGCATCCTAGGTTTGCTATTATTTCACA-TTTTTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1265842 214 + 114371477 TGATCACCTCTATTCTTTCAACTGAAAAAGATTCTAATGTGAAATATCTCTAATGTAAGTGC---ATATGTTCACAAAAGTG-AGCCAGT--ACAA--------AAATAAAATGTTTGACATAAATGTGATTTGTCTTTCTAAAATTGAATGGTAGAATAGTGACATTTTATTATTATTTGCATTAATTATAAAAGCATCCTAGGTTTGCTATTATTTCACA-TTTTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1291684 215 + 1464242 TGATCACCTCTATTTTTTCAACTGAAAAAGATTCTAATGTGAAATATCTCTAATGTAAGTGC---ATATGTTCACAAAAGTG-AGCCAGT--ACAA--------AAATAAAATGTTTGACGTAAATGTGATTTGTCTTTCTAAAATTGAATGGTAGAATAGTGACATTTTATTATTATTTGCATTAATTATAAAAGCAGCCTAGGTTTGCTATTATTTCACATTTTTTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1022672 214 + 81552678 TGATCACCGCTATTCTTTCAACCGAAAAAGATTCTAATGCGAAATATCTCTAATGTAAGTGC---ATATGTTCACAAAAGTG-AGCCAGT--ACAA--------AAATAAAATGTTTGACATAAATGTGATTTGTCTTTCTAAAATTGAATGGTAGAATAGTGACATTTTATTATTATTTGCATTAATTATAAAAGCATCCTAGTTTTGCTATTATTTCACA-TTTTTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1358224 213 + 108979918 TGATCACCTCTATTCTTTCAACCAAAAAAGATTCTAACATGAAATATCTCTAATGTAAGTGC---ATATATTCATAAAAGTG-ATCCAGT--ACAA--------AAATAAAATATTTGACAT-AGTGTGATTTGTCTTTCTAAAATTGAATGGTAAAATAGTGACATTTTATTATTACTTGCATTAATTATAAAAGCATCCTAGTTTTGCTATTACTTCACA-TTTTTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1330405 213 - 111193037 TGATCACCTCTATTCTTTCAACCAAAAAAGATTCTAACATGAAATATCTCTAATGTAAGTGC---ATATATTCATAAAAGTG-ATCCAGT--ACAA--------AAATAAAATATTTGACAT-AGTGTGATTTGTCTTTCTAAAATTGAATGGTAAAATAGTGACATTTTATTATTACTTGCATTAATTATAAAAGCATCCTAGTTTTGCTATTACTTCACA-TTTTTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1358518 213 + 3644372 TGATCACCTCTATTCTTTCAACCAAAAAAGATTCTAACATGAAATATCTCTAATGTAAGTGC---ATATATTCATAAAAGTG-ATCCAGT--ACAA--------AAATAAAATATTTGACAT-AGTGTGATTTGTCTTTCTAAAATTGAATGGTAAAATAGTGACATTTTATTATTACTTGCATTAATTATAAAAGCATCCTAGTTTTGCTATTACTTCACA-TTTTTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1312303 213 - 10304083 TGATCACCTCTATTCTTTCAACCAAAAAAGATTCTAACGTGAAATATCTCTAATGTAAGTGC---ATATATTCATAAAAGTG-ATCCAGT--ACAA--------AAATAAAATATTTGACAT-AGTGTGATTTGTCTTTCTAAAATTGAATGGTAAAATAGTGACATTTTATTATTACTTGCATTGATTATAAAAGCATCCTAGTTTTGCTATTATTTCACA-TTTTTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1381976 213 - 107702431 TGATCACCTCTATTCTTTCAACCAAAAAAGATTCTAATGTGAAATATCTCTAATGTAAGTGC---ATATATTCACAAAAGTG-ATCCAGT--ACAA--------AAATAAAATATTTGACAT-AGTGTGATTTGTCTTTCTAAAATTGAATGGTAAAATAGTGACATTTTATTATTACTTGCATTAATTATAAAAGCATCCTAGTTTTGCTATTATTTCACA-TTTTTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 861460 213 - 2200435 TGATCACCTCTATTCTTTCAACCAAAAAAGATTCTAACGTGAAATATCTCTAATGTAAGTGC---ATATATTCATAAAAGTG-ATCCAGT--ACAA--------AAATAAAATATTTGACAT-AATGTGATTTGTCTTTCTAAAATTGAATGGTAAAATAGTGACATTTTATTATTACTTGCATTAATTATAAAAGCATCCTAGTTTTGCTATTATTTCACA-TTTTTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1299279 214 - 13651311 TGATCACCTCTATTCTTTCAACCAAAAAAGATTCTAACGTGAAATATCTGTAATGTAAGTGC---ATATATTCACAAAAGTG-ATCCAGT--ACAA--------AAATAAAATATTTGACATAAATGTGATTTGTTTTTCTAAAATTGAATGGTAAAATAGTGACATTTTATTATTACTTGCATTAATTATATAAGCATCCTAGTTTTGCTATTATTTCACA-TTTTTT i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 894338 187 + 5252280 TGAGCATCCCTGTGCTTTTGACC-AAAAAGAGTCTAACATGAAATACCTCTAACGTAACTGCCAAAAATGTTCACAAAAATG-ATCCCGTTCATAA--------AAATAAAG-GCTTGACATGAAAGTGATTTTTCTACCTCAAATTGAAC---------ATGACGACGTGCCACTCCTGGCATTAATTCTAAGAATGCTTTAG----------------------TCT i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1573128 215 + 4416731 TGACTGCCTCCATAATTTCAATC-AAGTGCAGCCTAACATGAAATATCTCCAATGTAATTTC---ATAGCTTCACAAAAAAGTATCCATTTCATAAAAACCAATAAATAAAAAGTTTGACATAAAAATG-TTTGTCTACATAAAATTGAAT------ATGATAATGTTTAACTATTACTTGCATTGATTATAAGAACA--CTAGTTCTGTTTTTGTTTCACA-TTCTTT i dasNov3.JH576208 I 820 I 1448 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e calJac3.chr14 1310251 0 - 108792865 C a score=1842744.000000 s hg38.chr2_KI270774v1_alt 25372 326 + 223625 CCTAAATGGGAAAATAATTTTTCCATCTTTT---TGTTATTAATAATTCATTGAATTAATGTGGG----------------------------------------ATGTTTTGCACAGGG-CAATTACAGTTTATTTTCTTCCTAATTTTTTTATAACAAAATATCCCCATTTTACAGGCAAGACACCTGGCTCAAAGAAAGAAATTAAATTATTAGCCTAAATtatagctgccatttttgatgtttaaattgtgccagagtttacgtgcagtatctcacttaattctcccaatagacacagactggggtttgccccaatttataggtgagaaaaccaagttttggaaacgtGC-------------CTTTCTGAGACCTTTG s panTro5.chr2A 1305141 325 + 111504155 CCCAAATGGGAAAATAATTTTTCCATC-TTT---TGTTATTAATAATTCATTGAATTAATGTGGG----------------------------------------ATGTTTTGCACAAGG-CAATTACAGTTTATTTTCTTCCTAATTTTTTTATAACAAAATATCCCCATTTTACAGGCAAGACACCTGGCTCAAAGAAAGAAATTAAATTATTAGCCTAAATtatagctgccatttttgatgtttaaattgtgccagagtttacatgcagtatttcacttaattctcccaatagacacagactggggtttgccccaatttataggtgagaaaaccaagttttagaaacgtGC-------------CTTTCTGAGACCTTTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1266056 323 + 114371477 CCCAAATGGGAAAATAATTTTTCCATC-TTT---TGTTATTAATAATTCATTGAATTAATGTGGG----------------------------------------ATGTTTTGCACAAGG-CAATTACAGTTTATTTTCTTCCTAA-TTTTTTATAACAAAATATCCCCA-TTTACAGGCAAGACACCTGGCTCAAAGAAAGAAATTAAATTATTAGCCTAAATtatagctgccatttttgatgtttaaattgtgccagagtttacatgcagtatttcacttaattctcccaatagacacagactggggtttgccccaatttataggtgagaaaaccaagttttagaaacgtGC-------------CTTTCTGAGACCTTTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1291899 325 + 1464242 CCTAAATGGGAAAATAATTTTTCCATC-TTT---TGTTATTAATAATTCATTGAATTAATGTGGG----------------------------------------ATGTTTTGCACAGGG-CAATTACAGTTTATTTTCTTCCTAATTTTTTTATAACAAAATATCCCCATTTTACAGGCAAGACACCTGGCTCAAAGAAAGAAATTAAATTATTAGCCTAaattatagctgacatttttgatgtttaaattgtgccagagtttacatgcagtatctcacttaattctcccaatagacacagactggggtttgccccaatttataggtgagaaaaccaagttttagaaacgtGC-------------CTTTCTGAGACCTTTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1022886 325 + 81552678 CCTAAATGGGAAAATAATTTTTCCATC-TTT---TGTTATTAATAATTCATTGAATTAATGTGGG----------------------------------------ATGTTTTGCATAGAG-CAATTACAGTTTATTTTCTTCCTAATTTTTTTATAACAAAATATCCCCATTTTACAGGCAAGACACCTGGCTCAAAGAAAGAAATTAAATTATTAGCCTAAATtatagctgccatttttgatgtttaaattgtgccgaagtttacatgcagtatctcacttaattctcccaatagacacagactggggtttgtctcaatttataggtgagaaaaccaagttttagaaacgtGC-------------CTTTCTGAGACCTTTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1358437 320 + 108979918 CCTAAATGGGAAAATAATTTTTCCATC-TTT---TGTTATTAATAA-CCCTTGAATTAATTTGGG----------------------------------------ATGTTTCACACAGAGCCAATTACAGTTTATTTTCTTCCTAATTTTTTTATAACAAAAGatccccattttacaggcaagacacctggctcaaagaaag-----aagttattagcctaaATtatagctgccatttttgatggttaaattgtgccaaagtttacattcagtatctcacttaattctcccaatacacacagactggggtttgccccaatttataggtgagaaaaccaagttttagagacgtGC-------------CTTTCTGAGACCTTTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1330618 320 - 111193037 CCTAAATGGGAAAATAATTTTTCCATC-TTT---TGTTATTAATAA-CCCTTGAATTAATTTGGG----------------------------------------ATGTTTCGCACAGAGCCAATTACAGTTTATTTTCTTCCTAATTTTTTTATAACAAAAGatccccattttacaggcaagacacctggctcagagaaag-----aagttattagcctaaATTATAGCTGCCATTTTTGATGGTTAAattgtgccaaagtttacattcagtatctcacttaattctcccaatacacacagaccggggtttgccccaatttataggtgagaaaaccaagttttggagacgtGC-------------CTTTCTGAGACCTTTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1358731 320 + 3644372 CCTAAATGGGAAAATAATTTTTCCATC-TTT---TGTTATTAATAA-TCCTTGAATTAATTTGGG----------------------------------------ATGTTTCGCACAGAGCCAATTACAGTTTATTTTCTTCCTAATTTTTTTATAACAAAAGatccccattttacaggcaagacacctggctcaaagaaag-----aagttattagcctaaATtatagctgccatttttgatggttaaattgtgccaaagtttacattcagtatctcacttaattctcccaatacacacagactggggtttgccccaatttataggtgagaaaaccaagttttagagacgtGC-------------CTTTCTGAGACCTTTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1312516 320 - 10304083 CCTAAATGGGAAAATAATTTTTCCATC-TTT---TGTTATTAATAA-TCCTTGAATTAATTTGGG----------------------------------------ACGTTTCGCACAGAGCCAATTACAGTTTATTTTCTTCCTAATTTTTTTATAAAAAAAGatccccattttacaggcaagacacctggctcaaagaaag-----aagttattagcctaaATtatagctgccatttttgatggttaaattgtgccaaagtttacattcagtatctcacttaattctcccaatacacacagactggggtttgccccaatttataggtgagaaaaccaagttttagagacgtGC-------------CTTTCTGAGACCTTTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1382189 316 - 107702431 CCTAAATGGGAAAATAATTTTTCCATC-TTT---TGTTATTAATAA-TCATTGAATTAATTTGGG----------------------------------------ATGTTTCGCACCGAGCCAATTACAGTTGATTTTCTTCCTAATTTTTTTATAACAAAAGATCCCCATTTTATAGGCAAGACACCTGGCTCAAAAAAA---------TTATTAGCCTAAATTATAGCTGCCATTTTTTATGTTTAAattgtgccagagtttacattcagtatctcacttaattctcccaatagacacaggctggggtttgccccagtttataggtgagaaaaccaagttttagagacgtGC-------------CTTTCTGAGACCTTTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 861673 319 - 2200435 CCTAAATGGGAAAATAATTTTTCCATC-TTT---TGTTATTAATAA-TCCTTGAATTAATTTGGG----------------------------------------ACGTTTCACACAGAGCCAATTACAGTTTATTTTCTTCCTAATTTTTTTATAACAAAAGATCCCCATTTTACAGGCAAGACACCTGGCTCAAAGAAAG-----AAGTTATTAGCCTAAATTATAGCTGCCATTTTTGATGGTTAAattgtgccaaagtttacattcagtatctcacttaattctcccaatacacacagactggggtttgccccaatttataggtgagaaaaccaagttttagagacgtGC-------------CTTTCTGAGACCTTT- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1299493 360 - 13651311 CCTAAATGGGAAAATAATTTTTCCATC-TTT---TGTTATTAATAA-TCATTGAATTAATGTGGGACATTGAATTAATGTTATTCAATTAATAATCATTGAATTAATGTTTCACACAGAGCCAATTACAGTTGATTTTCTTCCTAATTTTTTTATAACAAAAGatccccattttacaggcaagacacctggctcaaagaaag-----aagttattagcctaaATTATAGCTGCCGTTTCTGATGTTTAAattgtgccaaagtttacattcagtatcttacttgattctcccaatagacacagactggggtttgccccaatttataggtgagaaaaccaagttttagagacgtGC-------------CTTTCTGAGACCTTTG i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 894525 319 + 5252280 CCTAAATGGGAACATAATCTTTCCATC-CATCACTATTATCAATAACATATTCAATTACCATGCG----------------------------------------ACTTTCTGTGCTGACTACATTGCAGTTAACTTTCTTCCCACTGTTTTCTGAACACAATGTCCGCGTTTCACAGT---GAGGCATGGGCACGAGAAAC-----AAACCACTAGCAGTGACTTTGGC----------AATGCTGATGTCACACC--ATTTCCCACTGGGTGCCTCACTTAGCTCT-CTGACAGCCTCAGACTGGCCTTGGCCCAGATT--CAGGGGAAGAAACCAAGTTTTGAACCCTTGCTGAGGCTGCAGGGCCACCTGAGACTCTGG i otoGar3.GL873658 C 0 I 195 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e dasNov3.JH576208 1573343 1448 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C a score=956950.000000 s hg38.chr2_KI270774v1_alt 25698 176 + 223625 GCTGCCAAGGGAGGATGGCAGCTGAGCTGGGTTTGCAGGAGTCTACGTGTGTCTCTGCTGTTGGAGATGCTCACAGGAGTTTCCAGATGACCGGATTCACCTGTGATCCTCTGAATCTTCCCC--CTTGAACTCTGTGCTTTCTGTACACATCAGGAAGCTCAGGAtgatccctttgt s panTro5.chr2A 1305466 174 + 111504155 GCTGCCAAGGGAGGATGGCAGCTGAGCTGGGTTTGCAGGAGTCTACGTGTGTCTCTGCTGTTGGAGATGCTCACAGGAGTTTCCAGATGACCGGATTCACCTGTGATCCTCTGAATCTTCCCC--CTTGAACTC--TGCTTTCTGTACACATCAGGAAGCTCAGGAtgatccctttgt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1266379 176 + 114371477 GCTGCCAAGGGAGGATGGCAGCTGAGCTGGGTTTGCAGGAGTCTACGTGTGTCTCTGCTGTTGGAGATGCTCACAGGAGTTTCCAGATGACCGGATTCACCTGTGATCCTCTGAATCTTCCCC--CTTGAACTCTGTGCTTTCTGTACACATCAGGAAGCTCAGGAtgatccctttgt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1292224 175 + 1464242 GCTGCCAAGGGAGGATGGCAGCTGAGCTGGGTTTTCAGGAGTCTACGTGTGTCTCTGCTGTTGGAGATGCTCACAGGAGTTTCCAGATGACCGGATTCACCTGTGATCCTCTGAATCTT-CCC--CTTGAACTCTGTGCTTTCTGTACACATCAGGAAGCTCAGGAtgatccctttgt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1023211 176 + 81552678 GCTGCCAAGGGAGGATGGCAGCTGAGCTGGGTTTGCAGGAGTCTACGTGTGTCTCTGCTGTTGGAGATGCTCACAGGAGTTTCCAGATGACGGGATTCACCTGTGATCCTCTGAATCTTCCCC--CTTGAACTCTGTGCTTTCTGTACACATCAGGAAGCTCAGGAtgatccctttgt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1358757 176 + 108979918 GCTGCCACGGGAGGACGGCAGCTGAGCTGGGTTTGCAGGAGTCCAC--GTGTCTCTGCTATTGGAGATGCTCACAGGAGTTTCCAGGTGACCGGATTCACCTGTGATCGTCCAGATCTTCCCCCACTTGAACGCTGTGCTTTCTGTGTCCATCAGGAAGCTCAGGACgatccctttgt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1330938 176 - 111193037 GCTGCCACGGGAGGACGGCAGCTGAGCTGGGTTTGCAGGAGTCCGC--GTGTCTCTGCTATTGGAGATGCTCACAGGAGTTTCCAGGTGACCGGATTCACCTGTGATCGTCCAGATCTTCCCCCACTCGAACGCTGTGCTTTCTGTGTCCATCAGGAAGCTCAGGACGATCCCTTTGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1359051 176 + 3644372 GCTGCCACGGGAGGATGGCAGCTGAGCTGGGTTTGCAGGAGTCCAC--GTGTCTCTGCTATTGGAGATGCTCACAGGAGTTTCCAGGTGACCGGATTCACCTGTGATCGTCCAGATCTTCCCCCACTTGAACGCTGTGCTTTCTGTGTCCATCAGGAAGCTCAGGACgatccctttgt i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1312836 176 - 10304083 GCTGCCACGGGAGGATGGCAGCTGAGCTGGGTTTGCAGGAGTCCAC--GTGTCTCTGCTGTTGGAGATGCTCACAGGAGTTTCCAGGTGACCGGATTCACCTGTGATCGTCCAGATCTTCCCCCACTTGAACGCTGTGCTTTCCGTGTGCATCAGGAAGCTCAGGgcgatccctgtgt i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1382505 176 - 107702431 GCTGCCACGGGAGGATGGCAGCTGAGCTGGGTTTGCAGGAGTCCAC--GTGTCTCTGCTATTGGAGATGCTCACAGGAGTTTCCAGGTGACCGGATTCACCTGTGATCGTCCAGATCTTCCCCCACTTAAACGCTGTGCTTTCTGTGTGCATCAGGAAGCTCAGGACAATCTctttgt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 861992 175 - 2200435 GCTGCCACGGGAGGATGGCAGCTGAGCTGGGTTTTCAGGAGTCCAC--GTATCTCTGCTATTGGAGATGCTCACAGGAGTTT-CAGGTGACCGGATTCACCTGTGGTCGTCCAGATCTTCCCCCACTTGAACGCTGTGCTTTCCGTGTGCATCAGGAAGCTCAGGACgatccctgtgt i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1299853 176 - 13651311 GCTGCCACGGGAGGATGGCAGCTGAGCTGGGTTTGCAGGAGTCCAC--GTGTCTCTGCTATTGGAGATGCTCACAGGAGTTTCCAGGTGACCAGATTCACCTGTGATCGTCCAGATCTTCCCCCACTTGAACGCTGTGCTTTCTGTGTGCATCAGGAAGCTCAGGACgatccctttgt i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 894844 195 + 5252280 I e dasNov3.JH576208 1573343 1448 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C a score=1699010.000000 s hg38.chr2_KI270774v1_alt 25874 305 + 223625 tccccatgaaaaagggccacagctgacacccctacagcagaaacacatgttaacaagagagaagcagagaacatttattacactcacatgtgttcatggaggtcttggg-----------------aaatgtgaactcag--agggtccagatggctgaggcccgaatgccctcctcacaga--------------------------------------------------------------------------------aaggaggagtggggTTGCTCAGTCCCGTGCTCCAGGGAGGGTATGtgggagtgaaggttgtcttggctgcagacgaagtctcccaggtaacctccgggagctgccctcagaagaaca--gggggaaagtctgggcttggtggcc----- s panTro5.chr2A 1305640 307 + 111504155 tccacatgaaaaagggccacagctgacacccctacagcagaaacacatgttaacaagagagaagcagagaacatttattacactcacatgtgttcatggaggtcttggg-----------------aaatgtgaactcagacagggtccagatggctgaggcccgaatgccctcctcacaga--------------------------------------------------------------------------------gaggaggagtggggTTGCTCAGTCCCGTGCTCCAGGGAGGGTATGtgggagtgaaggttgtcttggctgcagacgaagtctcccaggtaacctccgggagctgccctcagaagaaca--gggggaaagtctgggcttggtggcc----- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1266555 307 + 114371477 tccacatgaaaaagggccgcagctgacacccctacagcagaaacacatgttaacaagagagaagcagagaacatttattacactcacatgtgttcatggaggtcttggg-----------------aaatgtgaactcagagagggtccagatggctgaggcccgaatgccctcctcacaga--------------------------------------------------------------------------------gaggaggagtggggTTGCTCAGTCCCGTGCTCCAGGGAGGGTATGtgggagtgaaggttgtcttggctgcagacgaagtctcccaggtaacctccgggagctgccctcagaagaaca--gggggaaagtctgggcttggtggcc----- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1292399 307 + 1464242 tccccatgaaaaagggccacagctgacacccctacagcagaaacacatgttaacaagagagaagcagagaacatttattacactcacatgtgttcatggaggtcttggg-----------------aaatgtgaactcagagagggtccagatggctgaggcccgaatgccctcctcacaga--------------------------------------------------------------------------------gaggaggagtggggTTGCTCAGTCCCGTGCTCCAGGGAGGGTATGtgggagtgaaggttgtcttggctgcagacgaagtctcccaggtaacctccgggagctgccctcagaataaca--gggggaaagtctgggcttggtggcc----- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1023387 307 + 81552678 tccccatcaaaaagggccacagctgacacccctacagcagaaacacatgttaacaagagagaagcaaagaacatttattacactcacatgtgttcatggaggtcatggg-----------------aagtgtgaactcagagagggtccagatggctgaggcccgaatgccctcctcacaga--------------------------------------------------------------------------------gaggaggagtggggTTGCTCAGGCCGGTACTCCAGGGAGGGTGCGtgggagtgaaggttgtctcggctgcagatgaagtctcccaggtaacctctgggagctgccctcagaagaaca--gggggaaagtctgggcttggtggcc----- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1358933 304 + 108979918 tccccatcaaaaagggccacagctgacacccttacagcagagacacacgttaacaagggagaagcagagaacagttattACACTCACATGTGTTCATGGAGGTCATGGG-----------------ACATGTGAACTCAGAGAGGGTCCAGGTGGCTGAGGCCCAAATGCCCTCCGTACAGA--------------------------------------------------------------------------------GAGGAGGAGTGGAGATGCTCAGGCCCGTGCTCCAGGGAGGGTGCGTAGGAGTGaaggttgtctcggctgcagaccaagtctcccaggtcacctctgggagctgccctc---agaaga--gggggaaagtctgggcctggtggcc----- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1331114 299 - 111193037 TCCCCATCAAAAAGGGCCACAGCTGCCACCCTTACAGCAGAGACACACGTTAACGAGAGAGAAGCAGAGAACAGTTATTACACTCACATGTGTTCATGGAGGTCATGGG-----------------ACATGTGAACTC--AGAGGGTCCAGGTGGCTGAGGCCCAAATGCCCTCCTTACAGA-----------------------------------------------------------------------------------GAGGAGTGGAGATGCTCAGGCCCGTGCTCCAGGGAGGGTGCGTAGGAGTGaaggttgtctcggctgcagaccaagtctcccaggtcacctctgggagctgccctc---agaaga--gggggaaagtctgggcctggtggcc----- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1359227 304 + 3644372 tccccatcaaaaagggccacagctgacacccttacagcagagacacacgttaacaagagagaagcagagaacagttattACACTCACATGTGTTCATGGAGGTCATGGG-----------------ACATGTGAACTCAGAGAGGGTCCAGGTGGCTGAGGCCCAAATGCCCTCCTTACAGA--------------------------------------------------------------------------------GAGGAGGAGTGGAGATGCTCAGGCCCGTGCTCCAGGGAGGGTGCGTAGGAGTGaaggttgtctcggctgcagaccaagtctcccaggtcacctctgggagctgccctc---agaaga--gggggaaagtctgggcctggtggcc----- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1313012 304 - 10304083 tccccatcaaaaagggccacagctgacacccctacagcagagacacacgttaacaagagagaagcagagaacagttattacactctcatgtgttcgtggaggtcatggg-----------------acatgtgaactcagagagggtccaggtggctgaggcccaaatgccctccttacaga--------------------------------------------------------------------------------gaggaggAGTGGGGATGCTCAGGCCCGTGCTCCAGGGAGGGTGCGTAGGAGTGaaggttgtctcggctgcagaccaagtctcccaggtcacctccgggagctgccctc---agaaga--gggggaaagtctgggcctggtggcc----- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1382681 303 - 107702431 tccccatcaaaaagggccacagctgacacccctacagcagagacacacgttaacaagagagaagcagagaacagttattACACTCACATGTGTTCATGGAGGTCATGGG-----------------ACATGTGAACTCAGA----GTCCAGGTGGCTGAGGCCCAAATGCCCTCCTTACAGA--------------------------------------------------------------------------------GAGGAGGAGTGGGGATGCTCAGGCCCGTGCTCCAGGGAGGGTGCGtgggaatgaaggttgtctcggctgcagaccaagtctcccaggtcacctccnggagctgccctcaaaagaaga--gggggaaagtctgggcctggtgGCC----- i chlSab2.chr14 C 0 I 266 s manLeu1.NW_012103754v1 862167 307 - 2200435 tccccatcaaaaagggccacagttgacacccctacagcagagacacacgttaacaagagagaagcagagaacagttattacactctcatgtgttcatggaggtcatggg-----------------acatgtgaactcagagaaggtccaggTGGCTGAGGCCCAAATGCCCTCGTTACAGA--------------------------------------------------------------------------------GAGGAGGAGTGGGGATGCTCAGGCCCGTGCTCCAGGGAGGGTGCGTAGGACTGaaggttgtctcggctgcagaccaagtctcccaggtcacctccgggagctgccctcagaagaaga--gggggaaagtctgggcctggtggcc----- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1300029 386 - 13651311 tccccatcaaaaagggccacagctgacacccttacagcagagacacgtgttaacaagagggaagcagagaacagttattACACTCATATGTGTTCATGAAGGTCCTGGG-----------------ACACGTGAACTCAGAGAGGGTCCAGGTGGCCGAGGCCCAGATGCCCTCCTTACAGAGAGGAGGAGTGGGGATGCTCAGGCCCGTGCTCCTTACAGAGAGGAGGAGTGGAGATGCTCAGGCCCCTGCTCCTTACAGAGAGGAGGAGTGGGGATGCTCAGGCCCGTGCTCCAGGGAGGGTGCGtgggagtgaaggttgtctcggctgcagaccaagtctcccaggtaacctctgggagctgccctc---agaagaagaggggaaagtctgggcctggtggcc----- i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 895039 265 + 5252280 tccccactataaggggtcacgactcacatctctataacaaaaa-aca-gataacaagagaaaatcatagtgaacttattagctgcacatgcg--cacggaagtcacatgagtcactgaagttcacaacacgtgaactccacagggggccaggtggttg-ggctaaagtgccctcttcttggg--------------------------------------------------------------------------------cgaggggcatggggT--------------CCACACAGAGGCTG-GTGGGCACAAAGCTCGCT---------------GCCTCCCAG---AACTGTGTGCGCCATCC----------A--GG----------------AGTGGCCACCAC i otoGar3.GL873658 I 195 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e dasNov3.JH576208 1573343 1448 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C a score=332538.000000 s hg38.chr2_KI270774v1_alt 26179 70 + 223625 gcctccagtctcttctcttctctggaggttgatctttcccagctgtttaatgagatccctggggaggcag s panTro5.chr2A 1305947 70 + 111504155 gcctccagtctcttctcttctctggaggttgatctttcccagctgtttaatgagatccctggggaggcag i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1266862 70 + 114371477 gcctccagtctcttctcttctctggaggttgatctttcccagctgtttaatgagatccctggggaggcag i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1292706 70 + 1464242 gcctccagtctcttctcttctctggaggttgatctttcccagctgtttaatgagatccctggggaggcag i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1023694 65 + 81552678 gcctccag-----tctcttctctggaggttgatctttcccggctgtttaatgagatccctggggaggcag i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1359237 70 + 108979918 tcctccagtctcttctcttctctggtggtggatctttcccggctgtttaatgagatctctggggaggcgg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1331413 70 - 111193037 gcctccagtctcttctcttctctggtggtggatctttcccggctgtttaatgagatctctggggaggcgg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1359531 70 + 3644372 tcctccagtctcttctcttctctggtggtggatctttcccggctgtttaatgagatctctggggaggcgg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1313316 70 - 10304083 gcctccagtctcttctcttctctggtggtggatctttcccggctgtttaatgagatctctggggagatgg i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 862474 70 - 2200435 gcctccagtctcttctcttctctggtggtggatctttcccggctgtttaatgagatctctggggaggcgg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1300415 70 - 13651311 acctccagtcccttctcttctctggtgggggatctttcccggctgtttaatgagatctcaggggaggcga i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 895304 61 + 5252280 TCCCCAGGtcttctcccttct-----ggcttatctgtcccag--atttgatgagctccccagagcagg-- i otoGar3.GL873658 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e dasNov3.JH576208 1573343 1448 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e chlSab2.chr14 1382984 266 - 107702431 I a score=1075075.000000 s hg38.chr2_KI270774v1_alt 26249 182 + 223625 tcttaagacagttgcatttccttt-gaaagaagctttctcagtcaaat---gagactccagtgagtttcttcctgcacttgggagagaaacaagacaaggctggagggaccttgattccgaggcagcttctggggccctcagcacatccatgtgccaggcttcagggagccacctgctgagaccca s panTro5.chr2A 1306017 182 + 111504155 tcttaagacagttgcatttccttt-gaaagaagctttctcagtcaagt---gagactccagagagcttcttcctgcccttgggagagaaacaagacaaggctggagggaccttgattccgagacagcttctggggccctcagcacatccatgtgccagacttcagggagccacctgctgagaccca i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1266932 182 + 114371477 tcttaagacagttgcatttccttt-gaaagaagctttctcagtcaagt---gagactccagagagcttcttcctgcccttgggagagaaacaagacaaggctggagggaccttgattccgagacagcttctggggccctcagcacatccatgtgccagacttcagggagccacctgctgagaccca i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1292776 182 + 1464242 tcttaagacagttgcatttccttt-gaaagaagctttctcagtcaagt---gagactccagagagcttcttcctgcacttgggagagaaacaagacaaggctggagggacctttattccgtggcagcttctggggccctcagcacgtccatgtgccaggcttcagggagccacctgctgagaccca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1023759 185 + 81552678 tgttacgacagttgcatttccttt-gaaagaagctttctcagtcaaataaggagactccagagagcttctccctgcacttgggagagaaacaagacaaggctggagggaccttgattctgaggcagcttctggggccttcagcacatccatgtgccaggcttcagggagccacctgctgagaccca i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1359307 184 + 108979918 tcttaagacagttgca-ttccttt-gaaagaagctttctcagtcaagtaaggaggctccagagagcttctccccgcccttgggagagaaacaagacaaggctggagggaccttgattccgaggcagcttctggggccctcagcacatccatgtgccaggcttcagggcgccacctgctgagaccca i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1331483 184 - 111193037 tcttaagacagttgca-ttccttt-gaaagaagctttctcagtcaagtaaggagactccagagagcttctccccgcccttgggagagaaacaagacaaggctggagggaccttgattccgaggcagcttctggggccctcAGCACATCCATGTGCCAGGCTTCAGGGCGCCACCTGCTGAGACCCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1359601 184 + 3644372 tcttaagacagttgca-ttccttt-gaaagaagctttctcagtcaagtaaggagactccagagagcttctccccgcccttgggagagaaacaagacaaggctggagggaccttgattccgaggcagcttctggggccctcagcacatccatgtgccaggcttcagggcgccacctgctgagaccca i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1313386 184 - 10304083 tcttaagacagttgca-ttccttt-gaaagaagctttctcagtcaagtaaggagactccagagagcttctccctgcacttgggagagaaacaagacaaggctggagggaccttgattccgaggcagcttctggggccctcagcacatccatgtgccaggcttcagggtgccacctgctgagacccc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1383250 180 - 107702431 TCttaagacaggtgcatttccttt-gaaagaagctttctcagtcaagtaaggagactccagggagcttctccccgcacttgggagagaa-----acaaggctggaaggacCTTGATTCCGAGGCAGCTTCTGGGGCCCTCAACACATCCATGTGCCAGGCTTCAGGGTGCCACCTGCTGAGACCCA i chlSab2.chr14 I 266 C 0 s manLeu1.NW_012103754v1 862544 184 - 2200435 tcttaagacagttgca-ttccttt-gaaagaagctttctcagtcaagtaaggagactccagagagcttctccccacacttgggagagaaacaagacaaggctggagggaccttgattccgaggcagcttctggggccctcagcacatccatgtgccaggcttcagggcgccacctgctgagaccca i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1300485 185 - 13651311 tcttaagacaattgcatttccttt-gaaagaaactttctcagtcaagtaaggagactccagagagcttctccccacacttgggagagaaacaagacaaggctggagggaccttgattctgaggcagcttctggggccctcagcacatccatgcgccaggcttcagggtgccgcctgctgagaccca i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 895365 142 + 5252280 tcttaagacaactgcatttcttttggaaagaacctttcttgaccgtgtaaggaCG--------------TCCCCTCCCTTGAAGGCCAGCCAA-ATAGGGGTAGCAA-----------------------------CCACAGAAAGTCTCACTGCCAGGCCTTGGGGTGTCACTCTCTGAGCCCCA i otoGar3.GL873658 C 0 I 1124 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e dasNov3.JH576208 1573343 1448 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C a score=32439.000000 s hg38.chr2_KI270774v1_alt 26431 10 + 223625 acaATGCTC-T s panTro5.chr2A 1306199 10 + 111504155 acaATGCTC-T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1267114 10 + 114371477 acaATGCTC-T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1292958 10 + 1464242 acaATGCCC-T i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1023944 10 + 81552678 acaATGCTC-T i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1359491 9 + 108979918 acaATGCTC-- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1331667 9 - 111193037 ACAATGCTC-- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1359785 9 + 3644372 acaATGCTC-- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1313570 9 - 10304083 acaATGCTC-- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1383430 10 - 107702431 ACAATGCTCT- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 862728 10 - 2200435 acaATGCtct- i manLeu1.NW_012103754v1 C 0 I 46 s colAng1.NW_012118821v1 1300670 9 - 13651311 acaATGCTC-- i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1573343 1448 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C a score=80153.000000 s hg38.chr2_KI270774v1_alt 26441 21 + 223625 TTTTGTTTCCTAATTTTTATC s panTro5.chr2A 1306209 21 + 111504155 TTTTGTTTCCTAATTTTTATC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1267124 21 + 114371477 TTTTGTTTCCTAATTTTTATC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1292968 21 + 1464242 TTTTGTTTCCTAATTTTTATT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1023954 21 + 81552678 TTTTGTTTCCTAATTTTTATC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1359500 18 + 108979918 ---TGTTTTCTAGTTTTTATC i rheMac8.chr13 C 0 I 22 s macFas5.chr13 1331676 18 - 111193037 ---TGTTTTCTAGTTTTTATC i macFas5.chr13 C 0 I 22 s macNem1.NW_012011978v1 1359794 18 + 3644372 ---TGTTTTCTAGTTTTTATC i macNem1.NW_012011978v1 C 0 I 22 s cerAty1.NW_012000820v1 1313579 18 - 10304083 ---TGTTTTCTAGTttttatc i cerAty1.NW_012000820v1 C 0 I 15 s chlSab2.chr14 1383440 17 - 107702431 ----GTTTTCTAATTTTTATC i chlSab2.chr14 C 0 I 15 s colAng1.NW_012118821v1 1300679 18 - 13651311 ---TGTTTTCTAATttttatc i colAng1.NW_012118821v1 C 0 I 15 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1573343 1448 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e manLeu1.NW_012103754v1 862738 46 - 2200435 I a score=915853.000000 s hg38.chr2_KI270774v1_alt 26462 161 + 223625 GC-----ttttttttttttgagatagggtcttactctgttgcccaggctagagtgcagtggcacagtcatagctcactgcaggctcagactcctgggctcaagccatcctcctacctcagcctcccaaagcactgggattacagctgtgcaccacctcacccagcC s panTro5.chr2A 1306230 166 + 111504155 GCtttttttttttttttttgagatagggtcttactctgttgcccagcctggagtgcagtggcacagtcatagctcactgcaggctcagactcctgggctcaagccatcctcctacctcagcctcccaaagcactgggattacagctgtgcaccacctcacccagcC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1267145 162 + 114371477 GC----tttttttttttttgagatagggtcttactctgttgcccagcctggagtgcagtggcacagtcatagctcactgcaggctcagactcctgggctcaagccatcctcctacctcagcctcccaaagcactgggattacagctgtgcaccacctcacccagcC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1292989 162 + 1464242 GC----tttttttttttttgagatagggtcttactctgttgcccaggctggagtgcagtggcacagtcatagctcactgcaggctcagactcctgggctcaagccatcctcctacctcagcctcccaaagcactgggattacagctgtgcaccacctcacccagcC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1023975 161 + 81552678 GC--ttttttttttttttagagatagggccttactctgttgcccaggctggagtgcagtggcacagtcatagctcactgcaggctcagattcctgggctcaagccatcctcctacctcagcctcccaaagcactgggattacagctgtgcatcacctcaccca--- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1359540 162 + 108979918 ----gtttgtgtttttttggagatagggtcttactctgttgcccaggctggagtgcagtggcacagtcatagctccctgcaggctcagactcctgggctcaggccgtcctcctgcctcagcctcccaaagcactgggattacagctgtgcaccacctcacccagcC i rheMac8.chr13 I 22 C 0 s macFas5.chr13 1331716 162 - 111193037 ----gtttgtgtttttttggagatagggtcttactctgttgcccaggctggagtgcagtggcacagtcatagctccctgcaggctcagactcctgggctcaggccgtcctcctgcctcagcctcccaaagcactgggattacagccgtgcaccacctcacccagcC i macFas5.chr13 I 22 C 0 s macNem1.NW_012011978v1 1359834 162 + 3644372 ----gtttgtgtttttttggagatagggtcttactctgttgcccaggctggagtgcagtggcacagtcatagctccctgcaggctcagactcctgggctcaggccgtcctcctgcctcagcctcccaaagcactgggattacagctgtgcaccacctcacccagcC i macNem1.NW_012011978v1 I 22 C 0 s cerAty1.NW_012000820v1 1313612 162 - 10304083 ----gtttttgtttctttggagatagggtcttactctgttgcccaggctggatcgcagtggcacagtcatagctccctgcaggctcagactcctgggctcaagccatcctcctgcctcagcctcccaaagcactgggattacagctgtgcaccacctcacccggcc i cerAty1.NW_012000820v1 I 15 C 0 s chlSab2.chr14 1383472 162 - 107702431 ----gtttttgtttttttggagatagggtcttaccctgttgcccaggctggagtgcagtggcacagtcgtagctccctgcaggctcagactcctgggctcaagccattctcctgccttagcctcccaaagcactgggattacagctgtgcaccacctcacccggcC i chlSab2.chr14 I 15 C 0 s manLeu1.NW_012103754v1 862784 161 - 2200435 ----gttttt-tttttttggagatagggtcttactctgttgcccaggctggatcgcagtggcacagtcatagctccctgcaggctcagactcctgggctcaaaccatcctcctgcctcagcctcccaaagcactgggattacagctgtgcaccacctcacccggcC i manLeu1.NW_012103754v1 I 46 C 0 s colAng1.NW_012118821v1 1300712 162 - 13651311 ----gtttttgtttttttggagatagggtcttactctgttgcccaggctggagtgcggtggcacagtcacagctcactgcaggctcagactcctgggctcaagccatcctcctacctcagcctcccaaagcactgggattacagctgtgcaccacctcacccggcc i colAng1.NW_012118821v1 I 15 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1573343 1448 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C a score=1957734.000000 s hg38.chr2_KI270774v1_alt 26623 335 + 223625 TGTTTTATTTTCTTTTAATGAACAACATGCTGTAGCCTGGGACTTAGGT-AATTCAGACTCTGGAAAAGATATTTTCCTTTAA------TATTT--AAAACCTTCTTGAGGACCTAATTAATGCAAATCAGAGCCTTC-GTAGCAAGTCCTCTGTGAAGA---CCTCAGGGCAGGGATCTCACTCCTTAGA---CAAGGCCGGTTTCTTGCTTCTGGCTTGTTATGAATTATGTTATG-ATTACATTTGTCTCTTGAGGGTCCTACATTTCAAATAGCTCCTGCTCTGTAGGACAGCGGCAGCTTCCTC--TCACTGGGACTTTTAATTTGGGAAG-CAGGACATGCATAGGAAG s panTro5.chr2A 1306396 336 + 111504155 TGTTTTATTTTCTTTTAATGAACAACATGCTGTAGCCTGGGACTTAGGT-AATTCAGACTCTGGAAAAGATATTTTCCTTTAA------TATTT--AAAACCTTCTTGAGGACCTAATTAATGCAAATCAGAGCCTTT-GTAGCAAGTCTTCTGTGAAGA---CCTCAGGGCAGGGATCTCACTCCTTAGA---CAAGGCCGGTTTCTTGCTTCTGGCTTGTTATGAATTATGTTATGAATTACATTTGTCTCTTGAGTGTCCTACATTTCAAATAGCTCCTGCTCTGTAGGACAGCAGCAGCTTCCTC--TTACTGGGACTTTTAATTTGGGAAG-CAGGACATGCATAGGAAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1267307 336 + 114371477 TGTTTTATTTTCTTTTAATGAACAACATGCTGTAGCCTGGGACTTAGGT-AATTCAGACTCTGGAAAAGATATTTTCCTTTAA------TATTT--AAAACCTTCTTGAGGACCTAATTAATGCAAATCAGAGCCTTT-GTAGCAAGTCTTCTGTGAAGA---CCTCAGGGCAGGGGTCTCACTCCTTAGA---CAAGGCCGGTTTCTTGCTTCTGGCTTGTTATGAATTATGTTATGAATTACATTTGTCTCTTGAGTGTCCTACATTTCAAATAGCTCCTGCTCTGTAGGACAGCAGCAGCTTCCTC--TTACTGGGACTTTTAATTTGGGAAG-CAGGACATGCATAGGAAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1293151 331 + 1464242 TGTTTTATTTTCTTTTAATGAACAACATGCTGTAGCCTGGGACTTAGGT-AATTCAGACTCTGGAAAAGATATTTTCCTTTAA------TATTT--AAAACCTTCTTGAGGACCTAATTAATGCAAATCAGAGCCTTC-CTAGCAAGTCTTCTGTGAAGA---CCTCGGGGCAGGGATCTCACTCCTTAGA---CAAGGCCGGTTTCTTGCTTCTGGCTTGTTATGAA-----TTATGAATTACATTTGTCTCTTGCGTGTCCTACATTTCAAATAGCTCCTGCTCTGTAGGACAGCAGCAGCTTCCTC--TTACTGGGACTTTTAATTTGGGAAG-CAGGACATGCATAGGAAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1024136 335 + 81552678 -gTTTTATTTTCTTTTAATGAACAACATGCTGTAGCCTGGGACTTAGGT-AATTCAGACTCTGGAAAAGATATTTTCCTTTAA------TATTT--ACAAGCTTCTTGAGGACCTAATTACTGCAAATCAGAGCCTTC-CTAGCAAGTCTTCTGTGAAGA---CCTCGGGGCAGGGATCTCACTCCTTAGA---CAAGGCCGGTTTCTTGCTCCTGGCTTGTTATGAATTATGTTATGGATTACATTTGTCTCTTGAGTGTCCTACATTTCAAATAGCTCCCACTCTCTAGGACAGCAGCAGCTTCCCC--TTACTGGGATTGTTAATTTGGGAAG-CAGGACATGCATAGGAAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1359702 331 + 108979918 TG-----TTTTATTTTAATGAACAACATGCTGTAGCCTGGGACTTAGGT-AGTTCAGAGTCTGGAAAAGATATTTTCCTTTAA------TATTT--AAAACCTTCTTGAGGACCTAATCAATGCAAATCAGAGCCTCC-CTAGCAAGTCCTCTGTGAAGA---CCTCGGGGCAGGGAGCTCACTCCTTAGA---CGAGGCCGGTTTCTTGCTCCCGGCTTGTTGTGAGTTGTGTTATAAATTACATTTGTCTCTTGAGTGTCCTGCATTTCAAACAGCACCTGCTCTCTAGGACAGCAGCAGCTTCCTC--TTACTGGGATTGTGAATTTGGGAAG-CAGGACGTGCATAGGAAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1331878 331 - 111193037 TG-----TTTTATTTTAATGAACAACATGCTGTAGCCTGGGACTTAGGT-AGTTCAGAGTCTGGAAAAGATATTTTCCTTTAA------TATTT--AAAACCTTCTTGAGGACCTAATCAATGCAAATCAGAGCCTCC-CTAGCAAGTCCTCTGTGAAGA---CCTCGGGGCAGGGAGCTCACTCCTTAGA---CGAGGCCGGTTTCTTGCTCCCGGCTTGTTGTGAGTTGTGTTATAAATTACATTTGTCTCTTGAGTGTCCTGCATTTCAAACAGCACCTGCTCTCTAGGACAGCAGCAGCTTCCTC--TTACTGGGATTGTGAATTTGGGAAG-CAGGACGTGCATAGGAAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1359996 331 + 3644372 TG-----TTTTATTTTAATGAACAACATGCTGTAGCCTGGGACTTAGGT-AGTTCAGAGTCTGGAAAAGATATTTTCCTTTAA------TATTT--AAAACCTTCTTGAGGACCTAATCAATGCAAATCAGAGCCTCC-CTAGCAAGGCCTCTGTGAAGA---CCTCGGGGCAGGGAGCTCACTCCTTAGA---CGAGGCCGGTTTCTTGCTCCCGGCTTGTTGTGAGTTGTGTTATAAATTACATTTGTCTCTTGAGTGTCCTGCATTTCAAACAGCACCTGCTCTCTAGGACAGCAGCAGCTTCCTC--TTACTGGGATTGTGAATTTGGGAAG-CAGGACGTGCATAGGAAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1313774 336 - 10304083 tgttttattttattttaATGAACAACATGCTGTAGCCTGGGACATAGGT-AGTTCAGAGTCTGGAAAAGATATTTTCCTTTAA------TATTT--GAAACCTTCTTGAGGACGTCATCAATGCAAATCAGAGCCTTC-CTAGCAAGTCTTCTGTGAAGA---CCTCGGGGCAGGGAGCTCACTCCTTAGA---CGAGGCCGGTTCCTTGCTCCCGGCTTGTTGTGAGTTGTGTTATGAATTACGTTTGTCTCTTGAGTGTCCTACATTTCAAACAGCACCTGCTCTCTAGGACAGCAGCAGCTTCCTC--TTACTGGGACTGTGAATTTGGGAAG-CAGGACGTGCATAGGAAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1383634 331 - 107702431 TG-----TTTTATTTTAATGAACAACATGCTGTAGCCTGGGACTTAGGT-AATTCAGAGTCTGGAAAAGATATTTTCCTTTAA------TATTT--AAAACCTTCTTGAGGACCTAATCAATGCAAATCAGAGCCTCC-CTAGCAAATCTTCTGTGAAGA---CCTCGGGGCAGGGATCTCACTCCTTAGA---CGAGGCCGGTTTCTTGCTCCCGGCTTGTTGTGAGTTGTGTTATGAATTATGTTTGTCTCTTGAGTGTCCTACATTTCAAACAGCACCTGCTCTCTAGGACAGCAGCAGCTTCCTC--TTACTGGGATTGTGAATTTGGGAAG-CAGGACGTGCATAGGAAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 862945 335 - 2200435 TGTTTTATTTTATTTTAATGAACAACATGCTGTAGCCTGGGACTTAGGT-AGTTCAGAGTCTGGAAAAGATATTTTCCTTTAA------TATTT--AAAACCTTCTTGAGGACGTCATCAATGCAAATCAGAGCCTCC-CTAGCAAGTCTTCTGTGAAGA---CCTCGGGGCAGGGAGCTCACGCCTTAGA---CGAGGCCGGTTCCTTGCTCCCGGCTTGTTGTGAGTTGTGTTATGAATTACGTTTGTCTCTTGAGTGTCCTACATTTCAAACAGCACCTGCTCTCTAGGACAGCAGCAGCTTTCTC--TTACTGGGATTGTGAATTTGGGAAG-CAGGACGTGCATA-GAAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1300874 333 - 13651311 tgttttattttattttaATGAACAACATGCTGTAGCCTGGGACTTAGGT-AGTTCAGAGTCTGGAAAAGATATTTTCCTTTAA------TATTT--AAAACCTTCTTGAGGACCTAATCAATGCAAATCAGAGCCTTC-CTAGCAAGTCTTCTGTGAAGA---CCTCGGGGCAGGGATCTCACTCCTTAGA---CGAGGCCGGTTTCTTGCTCCTGGC---TTGTGAGTTGTGTTATGAATTACGTTTGTCTTTTGAGTGTCCTACATTTCAAATAGCACCTGCTCTCTAGGACAGGAGCAGCTTCCTC--TTACTGGGATTATGAATTTGGGAAG-CAGGACGTGCATAGGAAG i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1574791 337 + 4416731 TGTTTCCTTTTCTT----TGAACCAAGCAATAAAGCCTTGAATTTCGGTCATTTTTTATTCTGAAAGAGCGATTGtttttaaaataaattttttaaaaaatCTTCTTGAGGAGCTAATCAATGTAAATCAAACCATTTAATATTAAGTCTTTT-TGAAGAGCTCTTCAGAATAGGAAAAATAATTGTGGAGACTCAAAGTCAGTTTC-TGTTCCCAGCTTG------------TTATGATTTCCATTTATCTCTTAAGTGTCTTACATTTGAAATAGCTCTCAAATTCAAGGACAATAGTAGCTTTCTCTTTTACTGGGATACTTAATTTGGGATGTCAGGAAGTGGAAAGGAAG i dasNov3.JH576208 I 1448 I 3734 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e calJac3.chr14 1310251 0 - 108792865 C a score=74820.000000 s hg38.chr2_KI270774v1_alt 26958 18 + 223625 AGTGGACTCGCACTTTT-C s panTro5.chr2A 1306732 19 + 111504155 AGTGGACTCTCACTTTTCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1267643 19 + 114371477 AGTGGACTCTCACTTTTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1293482 19 + 1464242 AGTGGACTCTCACTTTTTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1024471 19 + 81552678 AGTGGACTCTCACTCTTCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1360033 18 + 108979918 AGTGGAGTCTCACTCTTC- i rheMac8.chr13 C 0 T 88 s macFas5.chr13 1332209 18 - 111193037 AGTGGAGTCTCACTCTTC- i macFas5.chr13 C 0 T 91 s macNem1.NW_012011978v1 1360327 18 + 3644372 AGTGGAGTCTCACTCTTC- i macNem1.NW_012011978v1 C 0 T 88 s cerAty1.NW_012000820v1 1314110 18 - 10304083 AGTGGAGTCTCACTGTTC- i cerAty1.NW_012000820v1 C 0 T 88 s chlSab2.chr14 1383965 18 - 107702431 AGTGGACTCTCACTCTTC- i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012103754v1 863280 18 - 2200435 AGTGGACTCTCACTCTTC- i manLeu1.NW_012103754v1 C 0 I 1 s colAng1.NW_012118821v1 1301207 18 - 13651311 AGTGGACTCGCACTCTTC- i colAng1.NW_012118821v1 C 0 T 88 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C a score=18600.000000 s hg38.chr2_KI270774v1_alt 26976 14 + 223625 CCCTGTTCTGGGCA s panTro5.chr2A 1306751 14 + 111504155 CCCTGTTCTGGGCA i panTro5.chr2A C 0 T 103 s panPan2.chr2A 1267662 14 + 114371477 CCCTGTTCTGGGCA i panPan2.chr2A C 0 T 103 s gorGor5.CYUI01015607v1 1293501 14 + 1464242 TCCTGTTCTGGGCA i gorGor5.CYUI01015607v1 C 0 T 103 s nomLeu3.chr19 1024490 14 + 81552678 CCCTGTTCTGGTCA i nomLeu3.chr19 C 0 T 102 s chlSab2.chr14 1383984 14 - 107702431 CCCTGTTCTGGGCA i chlSab2.chr14 I 1 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301225 88 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e cerAty1.NW_012000820v1 1314128 88 - 10304083 T e macNem1.NW_012011978v1 1360345 88 + 3644372 T e macFas5.chr13 1332227 91 - 111193037 T e rheMac8.chr13 1360051 88 + 108979918 T a score=538.000000 s hg38.chr2_KI270774v1_alt 26990 8 + 223625 CGCCTGGC s chlSab2.chr14 1383998 8 - 107702431 CACCCGGC i chlSab2.chr14 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301225 88 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e cerAty1.NW_012000820v1 1314128 88 - 10304083 T e macNem1.NW_012011978v1 1360345 88 + 3644372 T e macFas5.chr13 1332227 91 - 111193037 T e rheMac8.chr13 1360051 88 + 108979918 T e nomLeu3.chr19 1024504 102 + 81552678 T e gorGor5.CYUI01015607v1 1293515 103 + 1464242 T e panPan2.chr2A 1267676 103 + 114371477 T e panTro5.chr2A 1306765 103 + 111504155 T a score=445.000000 s hg38.chr2_KI270774v1_alt 26998 3 + 223625 CCA s macFas5.chr13 1332136 3 - 111193037 CCT i macFas5.chr13 T 91 C 0 s chlSab2.chr14 1384006 3 - 107702431 CCA i chlSab2.chr14 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301225 88 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e cerAty1.NW_012000820v1 1314128 88 - 10304083 T e macNem1.NW_012011978v1 1360345 88 + 3644372 T e rheMac8.chr13 1360051 88 + 108979918 T e nomLeu3.chr19 1024504 102 + 81552678 T e gorGor5.CYUI01015607v1 1293515 103 + 1464242 T e panPan2.chr2A 1267676 103 + 114371477 T e panTro5.chr2A 1306765 103 + 111504155 T a score=2800.000000 s hg38.chr2_KI270774v1_alt 27001 1 + 223625 G s panTro5.chr2A 1306662 1 + 111504155 G i panTro5.chr2A T 103 C 0 s panPan2.chr2A 1267573 1 + 114371477 G i panPan2.chr2A T 103 C 0 s gorGor5.CYUI01015607v1 1293412 1 + 1464242 G i gorGor5.CYUI01015607v1 T 103 C 0 s macFas5.chr13 1332139 1 - 111193037 G i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1314040 1 - 10304083 G i cerAty1.NW_012000820v1 T 88 C 0 s chlSab2.chr14 1384009 1 - 107702431 G i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1301137 1 - 13651311 G i colAng1.NW_012118821v1 T 88 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e manLeu1.NW_012103754v1 863298 1 - 2200435 I e macNem1.NW_012011978v1 1360345 88 + 3644372 T e rheMac8.chr13 1360051 88 + 108979918 T e nomLeu3.chr19 1024504 102 + 81552678 T a score=3600.000000 s hg38.chr2_KI270774v1_alt 27002 1 + 223625 C s panTro5.chr2A 1306663 1 + 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1267574 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1293413 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1024402 1 + 81552678 C i nomLeu3.chr19 T 102 C 0 s macFas5.chr13 1332140 1 - 111193037 C i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1314041 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1384010 1 - 107702431 C i chlSab2.chr14 C 0 T 114 s colAng1.NW_012118821v1 1301138 1 - 13651311 C i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e manLeu1.NW_012103754v1 863298 1 - 2200435 I e macNem1.NW_012011978v1 1360345 88 + 3644372 T e rheMac8.chr13 1360051 88 + 108979918 T a score=250053.000000 s hg38.chr2_KI270774v1_alt 27003 81 + 223625 TCTGTAGGACAGCAGCAGCTTCCTCTCACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCGCAC s panTro5.chr2A 1306664 81 + 111504155 TCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1267575 81 + 114371477 TCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1293414 81 + 1464242 TCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i gorGor5.CYUI01015607v1 C 0 T 83 s nomLeu3.chr19 1024403 81 + 81552678 TCTCTAGGACAGCAGCAGCTTCCCCTTACTGGGATTGTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1332141 81 - 111193037 TCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCAC i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1314042 81 - 10304083 TCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGACTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1383897 81 - 107702431 TCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGACTCTCAC i chlSab2.chr14 T 114 C 0 s colAng1.NW_012118821v1 1301139 81 - 13651311 TCTCTAGGACAGGAGCAGCTTCCTCTTACTGGGATTATGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGACTCGCAC i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e manLeu1.NW_012103754v1 863298 1 - 2200435 I e macNem1.NW_012011978v1 1360345 88 + 3644372 T e rheMac8.chr13 1360051 88 + 108979918 T a score=2548.000000 s hg38.chr2_KI270774v1_alt 27084 1 + 223625 T s panTro5.chr2A 1306745 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1267656 1 + 114371477 T i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1024484 1 + 81552678 T i nomLeu3.chr19 C 0 T 83 s macFas5.chr13 1332222 1 - 111193037 T i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1314123 1 - 10304083 T i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1383978 1 - 107702431 T i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1301220 1 - 13651311 T i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e manLeu1.NW_012103754v1 863298 1 - 2200435 I e macNem1.NW_012011978v1 1360345 88 + 3644372 T e rheMac8.chr13 1360051 88 + 108979918 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T a score=3399.000000 s hg38.chr2_KI270774v1_alt 27085 3 + 223625 TTT s panTro5.chr2A 1306746 3 + 111504155 TTT i panTro5.chr2A C 0 T 87 s panPan2.chr2A 1267657 3 + 114371477 TTT i panPan2.chr2A C 0 T 87 s macFas5.chr13 1332223 3 - 111193037 CTT i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1314124 3 - 10304083 GTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1383979 3 - 107702431 CTT i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1301221 3 - 13651311 CTT i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e manLeu1.NW_012103754v1 863298 1 - 2200435 I e macNem1.NW_012011978v1 1360345 88 + 3644372 T e rheMac8.chr13 1360051 88 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T a score=1000.000000 s hg38.chr2_KI270774v1_alt 27088 1 + 223625 C s macFas5.chr13 1332226 1 - 111193037 C i macFas5.chr13 C 0 T 91 s cerAty1.NW_012000820v1 1314127 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 T 88 s chlSab2.chr14 1383982 1 - 107702431 C i chlSab2.chr14 C 0 T 88 s colAng1.NW_012118821v1 1301224 1 - 13651311 C i colAng1.NW_012118821v1 C 0 T 88 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e manLeu1.NW_012103754v1 863298 1 - 2200435 I e macNem1.NW_012011978v1 1360345 88 + 3644372 T e rheMac8.chr13 1360051 88 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267660 87 + 114371477 T e panTro5.chr2A 1306749 87 + 111504155 T a score=0.000000 s hg38.chr2_KI270774v1_alt 27089 22 + 223625 CCCTGTTCTGGGCACGCCTGGC e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301225 88 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383983 88 - 107702431 T e cerAty1.NW_012000820v1 1314128 88 - 10304083 T e macNem1.NW_012011978v1 1360345 88 + 3644372 T e macFas5.chr13 1332227 91 - 111193037 T e rheMac8.chr13 1360051 88 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267660 87 + 114371477 T e panTro5.chr2A 1306749 87 + 111504155 T a score=77.000000 s hg38.chr2_KI270774v1_alt 27111 3 + 223625 CCA s macFas5.chr13 1332136 3 - 111193037 CCT i macFas5.chr13 T 91 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301225 88 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383983 88 - 107702431 T e cerAty1.NW_012000820v1 1314128 88 - 10304083 T e macNem1.NW_012011978v1 1360345 88 + 3644372 T e rheMac8.chr13 1360051 88 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267660 87 + 114371477 T e panTro5.chr2A 1306749 87 + 111504155 T a score=1000.000000 s hg38.chr2_KI270774v1_alt 27114 1 + 223625 G s panTro5.chr2A 1306662 1 + 111504155 G i panTro5.chr2A T 87 C 0 s panPan2.chr2A 1267573 1 + 114371477 G i panPan2.chr2A T 87 C 0 s gorGor5.CYUI01015607v1 1293412 1 + 1464242 G i gorGor5.CYUI01015607v1 T 83 C 0 s macFas5.chr13 1332139 1 - 111193037 G i macFas5.chr13 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301225 88 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383983 88 - 107702431 T e cerAty1.NW_012000820v1 1314128 88 - 10304083 T e macNem1.NW_012011978v1 1360345 88 + 3644372 T e rheMac8.chr13 1360051 88 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T a score=106102.000000 s hg38.chr2_KI270774v1_alt 27115 82 + 223625 CTCTGTAGGACAGCGGCAGCTTCCTCTCACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTGGCAC s panTro5.chr2A 1306663 82 + 111504155 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i panTro5.chr2A C 0 T 83 s panPan2.chr2A 1267574 82 + 114371477 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i panPan2.chr2A C 0 T 83 s gorGor5.CYUI01015607v1 1293413 82 + 1464242 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i gorGor5.CYUI01015607v1 C 0 T 83 s nomLeu3.chr19 1024402 82 + 81552678 CTCTCTAGGACAGCAGCAGCTTCCCCTTACTGGGATTGTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i nomLeu3.chr19 T 83 C 0 s macFas5.chr13 1332140 82 - 111193037 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCAC i macFas5.chr13 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301225 88 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383983 88 - 107702431 T e cerAty1.NW_012000820v1 1314128 88 - 10304083 T e macNem1.NW_012011978v1 1360345 88 + 3644372 T e rheMac8.chr13 1360051 88 + 108979918 T a score=273.000000 s hg38.chr2_KI270774v1_alt 27197 1 + 223625 T s nomLeu3.chr19 1024484 1 + 81552678 T i nomLeu3.chr19 C 0 T 83 s macFas5.chr13 1332222 1 - 111193037 T i macFas5.chr13 C 0 T 87 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301225 88 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383983 88 - 107702431 T e cerAty1.NW_012000820v1 1314128 88 - 10304083 T e macNem1.NW_012011978v1 1360345 88 + 3644372 T e rheMac8.chr13 1360051 88 + 108979918 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267656 83 + 114371477 T e panTro5.chr2A 1306745 83 + 111504155 T a score=0.000000 s hg38.chr2_KI270774v1_alt 27198 26 + 223625 TTCCCCCTGTTCTGGGCACGCCTGGC e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301225 88 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383983 88 - 107702431 T e cerAty1.NW_012000820v1 1314128 88 - 10304083 T e macNem1.NW_012011978v1 1360345 88 + 3644372 T e macFas5.chr13 1332223 87 - 111193037 T e rheMac8.chr13 1360051 88 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267656 83 + 114371477 T e panTro5.chr2A 1306745 83 + 111504155 T a score=77.000000 s hg38.chr2_KI270774v1_alt 27224 3 + 223625 CCA s macFas5.chr13 1332136 3 - 111193037 CCT i macFas5.chr13 T 87 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301225 88 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383983 88 - 107702431 T e cerAty1.NW_012000820v1 1314128 88 - 10304083 T e macNem1.NW_012011978v1 1360345 88 + 3644372 T e rheMac8.chr13 1360051 88 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267656 83 + 114371477 T e panTro5.chr2A 1306745 83 + 111504155 T a score=1000.000000 s hg38.chr2_KI270774v1_alt 27227 1 + 223625 G s panTro5.chr2A 1306662 1 + 111504155 G i panTro5.chr2A T 83 C 0 s panPan2.chr2A 1267573 1 + 114371477 G i panPan2.chr2A T 83 C 0 s gorGor5.CYUI01015607v1 1293412 1 + 1464242 G i gorGor5.CYUI01015607v1 T 83 C 0 s macFas5.chr13 1332139 1 - 111193037 G i macFas5.chr13 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301225 88 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383983 88 - 107702431 T e cerAty1.NW_012000820v1 1314128 88 - 10304083 T e macNem1.NW_012011978v1 1360345 88 + 3644372 T e rheMac8.chr13 1360051 88 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T a score=106102.000000 s hg38.chr2_KI270774v1_alt 27228 82 + 223625 CTCTGTAGGACAGCGGCAGCTTCCTCTCACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTGGCAC s panTro5.chr2A 1306663 82 + 111504155 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i panTro5.chr2A C 0 T 83 s panPan2.chr2A 1267574 82 + 114371477 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i panPan2.chr2A C 0 T 83 s gorGor5.CYUI01015607v1 1293413 82 + 1464242 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i gorGor5.CYUI01015607v1 C 0 T 83 s nomLeu3.chr19 1024402 82 + 81552678 CTCTCTAGGACAGCAGCAGCTTCCCCTTACTGGGATTGTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i nomLeu3.chr19 T 83 C 0 s macFas5.chr13 1332140 82 - 111193037 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCAC i macFas5.chr13 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301225 88 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383983 88 - 107702431 T e cerAty1.NW_012000820v1 1314128 88 - 10304083 T e macNem1.NW_012011978v1 1360345 88 + 3644372 T e rheMac8.chr13 1360051 88 + 108979918 T a score=273.000000 s hg38.chr2_KI270774v1_alt 27310 1 + 223625 T s nomLeu3.chr19 1024484 1 + 81552678 T i nomLeu3.chr19 C 0 T 83 s macFas5.chr13 1332222 1 - 111193037 T i macFas5.chr13 C 0 T 87 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301225 88 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383983 88 - 107702431 T e cerAty1.NW_012000820v1 1314128 88 - 10304083 T e macNem1.NW_012011978v1 1360345 88 + 3644372 T e rheMac8.chr13 1360051 88 + 108979918 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267656 83 + 114371477 T e panTro5.chr2A 1306745 83 + 111504155 T a score=0.000000 s hg38.chr2_KI270774v1_alt 27311 26 + 223625 TTCCCCCTGTTCTGGGCACGCCTGGC e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301225 88 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383983 88 - 107702431 T e cerAty1.NW_012000820v1 1314128 88 - 10304083 T e macNem1.NW_012011978v1 1360345 88 + 3644372 T e macFas5.chr13 1332223 87 - 111193037 T e rheMac8.chr13 1360051 88 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267656 83 + 114371477 T e panTro5.chr2A 1306745 83 + 111504155 T a score=77.000000 s hg38.chr2_KI270774v1_alt 27337 3 + 223625 CCA s macFas5.chr13 1332136 3 - 111193037 CCT i macFas5.chr13 T 87 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301225 88 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383983 88 - 107702431 T e cerAty1.NW_012000820v1 1314128 88 - 10304083 T e macNem1.NW_012011978v1 1360345 88 + 3644372 T e rheMac8.chr13 1360051 88 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267656 83 + 114371477 T e panTro5.chr2A 1306745 83 + 111504155 T a score=1000.000000 s hg38.chr2_KI270774v1_alt 27340 1 + 223625 G s panTro5.chr2A 1306662 1 + 111504155 G i panTro5.chr2A T 83 C 0 s panPan2.chr2A 1267573 1 + 114371477 G i panPan2.chr2A T 83 C 0 s gorGor5.CYUI01015607v1 1293412 1 + 1464242 G i gorGor5.CYUI01015607v1 T 83 C 0 s macFas5.chr13 1332139 1 - 111193037 G i macFas5.chr13 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301225 88 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383983 88 - 107702431 T e cerAty1.NW_012000820v1 1314128 88 - 10304083 T e macNem1.NW_012011978v1 1360345 88 + 3644372 T e rheMac8.chr13 1360051 88 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T a score=106102.000000 s hg38.chr2_KI270774v1_alt 27341 82 + 223625 CTCTGTAGGACAGCGGCAGCTTCCTCTCACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTGGCAC s panTro5.chr2A 1306663 82 + 111504155 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i panTro5.chr2A C 0 T 83 s panPan2.chr2A 1267574 82 + 114371477 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i panPan2.chr2A C 0 T 83 s gorGor5.CYUI01015607v1 1293413 82 + 1464242 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i gorGor5.CYUI01015607v1 C 0 T 83 s nomLeu3.chr19 1024402 82 + 81552678 CTCTCTAGGACAGCAGCAGCTTCCCCTTACTGGGATTGTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i nomLeu3.chr19 T 83 C 0 s macFas5.chr13 1332140 82 - 111193037 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCAC i macFas5.chr13 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301225 88 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383983 88 - 107702431 T e cerAty1.NW_012000820v1 1314128 88 - 10304083 T e macNem1.NW_012011978v1 1360345 88 + 3644372 T e rheMac8.chr13 1360051 88 + 108979918 T a score=273.000000 s hg38.chr2_KI270774v1_alt 27423 1 + 223625 T s nomLeu3.chr19 1024484 1 + 81552678 T i nomLeu3.chr19 C 0 T 83 s macFas5.chr13 1332222 1 - 111193037 T i macFas5.chr13 C 0 T 87 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301225 88 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383983 88 - 107702431 T e cerAty1.NW_012000820v1 1314128 88 - 10304083 T e macNem1.NW_012011978v1 1360345 88 + 3644372 T e rheMac8.chr13 1360051 88 + 108979918 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267656 83 + 114371477 T e panTro5.chr2A 1306745 83 + 111504155 T a score=0.000000 s hg38.chr2_KI270774v1_alt 27424 26 + 223625 TTCCCCCTGTTCTGGGCACGCCTGGC e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301225 88 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383983 88 - 107702431 T e cerAty1.NW_012000820v1 1314128 88 - 10304083 T e macNem1.NW_012011978v1 1360345 88 + 3644372 T e macFas5.chr13 1332223 87 - 111193037 T e rheMac8.chr13 1360051 88 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267656 83 + 114371477 T e panTro5.chr2A 1306745 83 + 111504155 T a score=77.000000 s hg38.chr2_KI270774v1_alt 27450 3 + 223625 CCA s macFas5.chr13 1332136 3 - 111193037 CCT i macFas5.chr13 T 87 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301225 88 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383983 88 - 107702431 T e cerAty1.NW_012000820v1 1314128 88 - 10304083 T e macNem1.NW_012011978v1 1360345 88 + 3644372 T e rheMac8.chr13 1360051 88 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267656 83 + 114371477 T e panTro5.chr2A 1306745 83 + 111504155 T a score=4500.000000 s hg38.chr2_KI270774v1_alt 27453 1 + 223625 G s panTro5.chr2A 1306662 1 + 111504155 G i panTro5.chr2A T 83 C 0 s panPan2.chr2A 1267573 1 + 114371477 G i panPan2.chr2A T 83 C 0 s gorGor5.CYUI01015607v1 1293412 1 + 1464242 G i gorGor5.CYUI01015607v1 T 83 C 0 s rheMac8.chr13 1359963 1 + 108979918 G i rheMac8.chr13 T 88 C 0 s macFas5.chr13 1332139 1 - 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1360257 1 + 3644372 G i macNem1.NW_012011978v1 T 88 C 0 s cerAty1.NW_012000820v1 1314040 1 - 10304083 G i cerAty1.NW_012000820v1 T 88 C 0 s chlSab2.chr14 1383895 1 - 107702431 G i chlSab2.chr14 T 88 C 0 s colAng1.NW_012118821v1 1301137 1 - 13651311 G i colAng1.NW_012118821v1 T 88 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e manLeu1.NW_012103754v1 863298 1 - 2200435 I e nomLeu3.chr19 1024485 83 + 81552678 T a score=542602.000000 s hg38.chr2_KI270774v1_alt 27454 115 + 223625 CTCTGTAGGACAGCGGCAGCTTCCTCTCACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCGCACTTTTCCCCCTGTTCTGGGCACGCCTGGCCCAGC s panTro5.chr2A 1306663 115 + 111504155 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTTTTCCCCCTGTTCTGGGCACACCTGGCCCAGC i panTro5.chr2A C 0 T 114 s panPan2.chr2A 1267574 115 + 114371477 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTTTTCCCCCTGTTCTGGGCACACCTGGCCCAGC i panPan2.chr2A C 0 T 114 s gorGor5.CYUI01015607v1 1293413 115 + 1464242 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTTTTTCTCCTGTTCTGGGCACACCTGTCCCAGC i gorGor5.CYUI01015607v1 C 0 T 114 s nomLeu3.chr19 1024402 115 + 81552678 CTCTCTAGGACAGCAGCAGCTTCCCCTTACTGGGATTGTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTCTTCCCCCTGTTCTGGTCACACCTGGCCCAGC i nomLeu3.chr19 T 83 T 114 s rheMac8.chr13 1359964 115 + 108979918 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCACTCTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i rheMac8.chr13 C 0 T 116 s macFas5.chr13 1332140 115 - 111193037 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCACTCTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i macFas5.chr13 C 0 T 114 s macNem1.NW_012011978v1 1360258 115 + 3644372 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCACTCTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i macNem1.NW_012011978v1 C 0 T 116 s cerAty1.NW_012000820v1 1314041 115 - 10304083 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGACTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCACTGTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i cerAty1.NW_012000820v1 C 0 T 114 s chlSab2.chr14 1383896 115 - 107702431 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGACTCTCACTCTTCGCCCTGTTCTGGGCACACCCGGCCCAGC i chlSab2.chr14 C 0 T 114 s colAng1.NW_012118821v1 1301138 115 - 13651311 CTCTCTAGGACAGGAGCAGCTTCCTCTTACTGGGATTATGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGACTCGCACTCTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i colAng1.NW_012118821v1 C 0 T 114 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e manLeu1.NW_012103754v1 863298 1 - 2200435 I a score=250053.000000 s hg38.chr2_KI270774v1_alt 27569 81 + 223625 TCTGTAGGACAGCAGCAGCTTCCTCTCACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCGCAC s panTro5.chr2A 1306664 81 + 111504155 TCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i panTro5.chr2A T 114 C 0 s panPan2.chr2A 1267575 81 + 114371477 TCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i panPan2.chr2A T 114 C 0 s gorGor5.CYUI01015607v1 1293414 81 + 1464242 TCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i gorGor5.CYUI01015607v1 T 114 T 83 s nomLeu3.chr19 1024403 81 + 81552678 TCTCTAGGACAGCAGCAGCTTCCCCTTACTGGGATTGTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i nomLeu3.chr19 T 114 C 0 s macFas5.chr13 1332141 81 - 111193037 TCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCAC i macFas5.chr13 T 114 C 0 s cerAty1.NW_012000820v1 1314042 81 - 10304083 TCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGACTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCAC i cerAty1.NW_012000820v1 T 114 C 0 s chlSab2.chr14 1383897 81 - 107702431 TCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGACTCTCAC i chlSab2.chr14 T 114 C 0 s colAng1.NW_012118821v1 1301139 81 - 13651311 TCTCTAGGACAGGAGCAGCTTCCTCTTACTGGGATTATGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGACTCGCAC i colAng1.NW_012118821v1 T 114 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e manLeu1.NW_012103754v1 863298 1 - 2200435 I e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T a score=2548.000000 s hg38.chr2_KI270774v1_alt 27650 1 + 223625 T s panTro5.chr2A 1306745 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1267656 1 + 114371477 T i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1024484 1 + 81552678 T i nomLeu3.chr19 C 0 T 83 s macFas5.chr13 1332222 1 - 111193037 T i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1314123 1 - 10304083 T i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1383978 1 - 107702431 T i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1301220 1 - 13651311 T i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e manLeu1.NW_012103754v1 863298 1 - 2200435 I e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T a score=3399.000000 s hg38.chr2_KI270774v1_alt 27651 3 + 223625 TTT s panTro5.chr2A 1306746 3 + 111504155 TTT i panTro5.chr2A C 0 T 87 s panPan2.chr2A 1267657 3 + 114371477 TTT i panPan2.chr2A C 0 T 87 s macFas5.chr13 1332223 3 - 111193037 CTT i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1314124 3 - 10304083 GTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1383979 3 - 107702431 CTT i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1301221 3 - 13651311 CTT i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e manLeu1.NW_012103754v1 863298 1 - 2200435 I e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T a score=1000.000000 s hg38.chr2_KI270774v1_alt 27654 1 + 223625 C s macFas5.chr13 1332226 1 - 111193037 C i macFas5.chr13 C 0 T 91 s cerAty1.NW_012000820v1 1314127 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 T 88 s chlSab2.chr14 1383982 1 - 107702431 C i chlSab2.chr14 C 0 T 88 s colAng1.NW_012118821v1 1301224 1 - 13651311 C i colAng1.NW_012118821v1 C 0 T 88 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e manLeu1.NW_012103754v1 863298 1 - 2200435 I e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267660 87 + 114371477 T e panTro5.chr2A 1306749 87 + 111504155 T a score=0.000000 s hg38.chr2_KI270774v1_alt 27655 22 + 223625 CCCTGTTCTGGGCACGCCTGGC e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301225 88 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383983 88 - 107702431 T e cerAty1.NW_012000820v1 1314128 88 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e macFas5.chr13 1332227 91 - 111193037 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267660 87 + 114371477 T e panTro5.chr2A 1306749 87 + 111504155 T a score=77.000000 s hg38.chr2_KI270774v1_alt 27677 3 + 223625 CCA s macFas5.chr13 1332136 3 - 111193037 CCT i macFas5.chr13 T 91 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301225 88 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383983 88 - 107702431 T e cerAty1.NW_012000820v1 1314128 88 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267660 87 + 114371477 T e panTro5.chr2A 1306749 87 + 111504155 T a score=4500.000000 s hg38.chr2_KI270774v1_alt 27680 1 + 223625 G s panTro5.chr2A 1306662 1 + 111504155 G i panTro5.chr2A T 87 C 0 s panPan2.chr2A 1267573 1 + 114371477 G i panPan2.chr2A T 87 C 0 s gorGor5.CYUI01015607v1 1293412 1 + 1464242 G i gorGor5.CYUI01015607v1 T 83 C 0 s rheMac8.chr13 1359963 1 + 108979918 G i rheMac8.chr13 T 116 C 0 s macFas5.chr13 1332139 1 - 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1360257 1 + 3644372 G i macNem1.NW_012011978v1 T 116 C 0 s cerAty1.NW_012000820v1 1314040 1 - 10304083 G i cerAty1.NW_012000820v1 T 88 C 0 s chlSab2.chr14 1383895 1 - 107702431 G i chlSab2.chr14 T 88 C 0 s colAng1.NW_012118821v1 1301137 1 - 13651311 G i colAng1.NW_012118821v1 T 88 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e manLeu1.NW_012103754v1 863298 1 - 2200435 I e nomLeu3.chr19 1024485 83 + 81552678 T a score=542602.000000 s hg38.chr2_KI270774v1_alt 27681 115 + 223625 CTCTGTAGGACAGCGGCAGCTTCCTCTCACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCGCACTTTTCCCCCTGTTCTGGGCACGCCTGGCCCAGC s panTro5.chr2A 1306663 115 + 111504155 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTTTTCCCCCTGTTCTGGGCACACCTGGCCCAGC i panTro5.chr2A C 0 T 114 s panPan2.chr2A 1267574 115 + 114371477 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTTTTCCCCCTGTTCTGGGCACACCTGGCCCAGC i panPan2.chr2A C 0 T 114 s gorGor5.CYUI01015607v1 1293413 115 + 1464242 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTTTTTCTCCTGTTCTGGGCACACCTGTCCCAGC i gorGor5.CYUI01015607v1 C 0 T 114 s nomLeu3.chr19 1024402 115 + 81552678 CTCTCTAGGACAGCAGCAGCTTCCCCTTACTGGGATTGTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTCTTCCCCCTGTTCTGGTCACACCTGGCCCAGC i nomLeu3.chr19 T 83 T 114 s rheMac8.chr13 1359964 115 + 108979918 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCACTCTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i rheMac8.chr13 C 0 T 114 s macFas5.chr13 1332140 115 - 111193037 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCACTCTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i macFas5.chr13 C 0 T 114 s macNem1.NW_012011978v1 1360258 115 + 3644372 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCACTCTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i macNem1.NW_012011978v1 C 0 T 114 s cerAty1.NW_012000820v1 1314041 115 - 10304083 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGACTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCACTGTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i cerAty1.NW_012000820v1 C 0 T 114 s chlSab2.chr14 1383896 115 - 107702431 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGACTCTCACTCTTCGCCCTGTTCTGGGCACACCCGGCCCAGC i chlSab2.chr14 C 0 T 114 s colAng1.NW_012118821v1 1301138 115 - 13651311 CTCTCTAGGACAGGAGCAGCTTCCTCTTACTGGGATTATGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGACTCGCACTCTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i colAng1.NW_012118821v1 C 0 T 114 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e manLeu1.NW_012103754v1 863298 1 - 2200435 I a score=534852.000000 s hg38.chr2_KI270774v1_alt 27796 114 + 223625 TCTGTAGGACAGCGGCAGCTTCCTCTCACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTGGCACTTTTCCCCCTGTTCTGGGCACGCCTGGCCCAGC s panTro5.chr2A 1306664 114 + 111504155 TCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTTTTCCCCCTGTTCTGGGCACACCTGGCCCAGC i panTro5.chr2A T 114 T 114 s panPan2.chr2A 1267575 114 + 114371477 TCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTTTTCCCCCTGTTCTGGGCACACCTGGCCCAGC i panPan2.chr2A T 114 T 114 s gorGor5.CYUI01015607v1 1293414 114 + 1464242 TCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTTTTTCTCCTGTTCTGGGCACACCTGTCCCAGC i gorGor5.CYUI01015607v1 T 114 T 114 s nomLeu3.chr19 1024403 114 + 81552678 TCTCTAGGACAGCAGCAGCTTCCCCTTACTGGGATTGTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTCTTCCCCCTGTTCTGGTCACACCTGGCCCAGC i nomLeu3.chr19 T 114 T 114 s rheMac8.chr13 1359965 114 + 108979918 TCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCACTCTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i rheMac8.chr13 T 114 T 116 s macFas5.chr13 1332141 114 - 111193037 TCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCACTCTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i macFas5.chr13 T 114 T 114 s macNem1.NW_012011978v1 1360259 114 + 3644372 TCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCACTCTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i macNem1.NW_012011978v1 T 114 T 116 s cerAty1.NW_012000820v1 1314042 114 - 10304083 TCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGACTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCACTGTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i cerAty1.NW_012000820v1 T 114 T 116 s chlSab2.chr14 1383897 114 - 107702431 TCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGACTCTCACTCTTCGCCCTGTTCTGGGCACACCCGGCCCAGC i chlSab2.chr14 T 114 T 116 s colAng1.NW_012118821v1 1301139 114 - 13651311 TCTCTAGGACAGGAGCAGCTTCCTCTTACTGGGATTATGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGACTCGCACTCTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i colAng1.NW_012118821v1 T 114 T 116 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e manLeu1.NW_012103754v1 863298 1 - 2200435 I a score=104602.000000 s hg38.chr2_KI270774v1_alt 27910 81 + 223625 TCTGTAGGACAGCGGCAGCTTCCTCTCACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTGGCAC s panTro5.chr2A 1306664 81 + 111504155 TCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i panTro5.chr2A T 114 C 0 s panPan2.chr2A 1267575 81 + 114371477 TCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i panPan2.chr2A T 114 C 0 s gorGor5.CYUI01015607v1 1293414 81 + 1464242 TCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i gorGor5.CYUI01015607v1 T 114 T 83 s nomLeu3.chr19 1024403 81 + 81552678 TCTCTAGGACAGCAGCAGCTTCCCCTTACTGGGATTGTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i nomLeu3.chr19 T 114 C 0 s macFas5.chr13 1332141 81 - 111193037 TCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCAC i macFas5.chr13 T 114 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T a score=910.000000 s hg38.chr2_KI270774v1_alt 27991 1 + 223625 T s panTro5.chr2A 1306745 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1267656 1 + 114371477 T i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1024484 1 + 81552678 T i nomLeu3.chr19 C 0 T 83 s macFas5.chr13 1332222 1 - 111193037 T i macFas5.chr13 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T a score=1272.000000 s hg38.chr2_KI270774v1_alt 27992 3 + 223625 TTT s panTro5.chr2A 1306746 3 + 111504155 TTT i panTro5.chr2A C 0 T 87 s panPan2.chr2A 1267657 3 + 114371477 TTT i panPan2.chr2A C 0 T 87 s macFas5.chr13 1332223 3 - 111193037 CTT i macFas5.chr13 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T a score=100.000000 s hg38.chr2_KI270774v1_alt 27995 1 + 223625 C s macFas5.chr13 1332226 1 - 111193037 C i macFas5.chr13 C 0 T 91 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267660 87 + 114371477 T e panTro5.chr2A 1306749 87 + 111504155 T a score=0.000000 s hg38.chr2_KI270774v1_alt 27996 22 + 223625 CCCTGTTCTGGGCACGCCTGGC e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e macFas5.chr13 1332227 91 - 111193037 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267660 87 + 114371477 T e panTro5.chr2A 1306749 87 + 111504155 T a score=77.000000 s hg38.chr2_KI270774v1_alt 28018 3 + 223625 CCA s macFas5.chr13 1332136 3 - 111193037 CCT i macFas5.chr13 T 91 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267660 87 + 114371477 T e panTro5.chr2A 1306749 87 + 111504155 T a score=2800.000000 s hg38.chr2_KI270774v1_alt 28021 1 + 223625 G s panTro5.chr2A 1306662 1 + 111504155 G i panTro5.chr2A T 87 C 0 s panPan2.chr2A 1267573 1 + 114371477 G i panPan2.chr2A T 87 C 0 s gorGor5.CYUI01015607v1 1293412 1 + 1464242 G i gorGor5.CYUI01015607v1 T 83 C 0 s macFas5.chr13 1332139 1 - 111193037 G i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1314040 1 - 10304083 G i cerAty1.NW_012000820v1 T 116 C 0 s chlSab2.chr14 1383895 1 - 107702431 G i chlSab2.chr14 T 116 C 0 s colAng1.NW_012118821v1 1301137 1 - 13651311 G i colAng1.NW_012118821v1 T 116 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e manLeu1.NW_012103754v1 863298 1 - 2200435 I e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T a score=253653.000000 s hg38.chr2_KI270774v1_alt 28022 82 + 223625 CTCTGTAGGACAGCAGCAGCTTCCTCTCACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCGCAC s panTro5.chr2A 1306663 82 + 111504155 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i panTro5.chr2A C 0 T 83 s panPan2.chr2A 1267574 82 + 114371477 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i panPan2.chr2A C 0 T 83 s gorGor5.CYUI01015607v1 1293413 82 + 1464242 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i gorGor5.CYUI01015607v1 C 0 T 83 s nomLeu3.chr19 1024402 82 + 81552678 CTCTCTAGGACAGCAGCAGCTTCCCCTTACTGGGATTGTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i nomLeu3.chr19 T 83 C 0 s macFas5.chr13 1332140 82 - 111193037 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCAC i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1314041 82 - 10304083 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGACTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1383896 82 - 107702431 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGACTCTCAC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1301138 82 - 13651311 CTCTCTAGGACAGGAGCAGCTTCCTCTTACTGGGATTATGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGACTCGCAC i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e manLeu1.NW_012103754v1 863298 1 - 2200435 I e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T a score=1365.000000 s hg38.chr2_KI270774v1_alt 28104 1 + 223625 T s nomLeu3.chr19 1024484 1 + 81552678 T i nomLeu3.chr19 C 0 T 83 s macFas5.chr13 1332222 1 - 111193037 T i macFas5.chr13 C 0 T 87 s cerAty1.NW_012000820v1 1314123 1 - 10304083 T i cerAty1.NW_012000820v1 C 0 T 84 s chlSab2.chr14 1383978 1 - 107702431 T i chlSab2.chr14 C 0 T 84 s colAng1.NW_012118821v1 1301220 1 - 13651311 T i colAng1.NW_012118821v1 C 0 T 84 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e manLeu1.NW_012103754v1 863298 1 - 2200435 I e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267656 83 + 114371477 T e panTro5.chr2A 1306745 83 + 111504155 T a score=0.000000 s hg38.chr2_KI270774v1_alt 28105 26 + 223625 TTCCCCCTGTTCTGGGCACGCCTGGC e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301221 84 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383979 84 - 107702431 T e cerAty1.NW_012000820v1 1314124 84 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e macFas5.chr13 1332223 87 - 111193037 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267656 83 + 114371477 T e panTro5.chr2A 1306745 83 + 111504155 T a score=77.000000 s hg38.chr2_KI270774v1_alt 28131 3 + 223625 CCA s macFas5.chr13 1332136 3 - 111193037 CCT i macFas5.chr13 T 87 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301221 84 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383979 84 - 107702431 T e cerAty1.NW_012000820v1 1314124 84 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267656 83 + 114371477 T e panTro5.chr2A 1306745 83 + 111504155 T a score=1000.000000 s hg38.chr2_KI270774v1_alt 28134 1 + 223625 G s panTro5.chr2A 1306662 1 + 111504155 G i panTro5.chr2A T 83 C 0 s panPan2.chr2A 1267573 1 + 114371477 G i panPan2.chr2A T 83 C 0 s gorGor5.CYUI01015607v1 1293412 1 + 1464242 G i gorGor5.CYUI01015607v1 T 83 C 0 s macFas5.chr13 1332139 1 - 111193037 G i macFas5.chr13 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301221 84 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383979 84 - 107702431 T e cerAty1.NW_012000820v1 1314124 84 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T a score=107227.000000 s hg38.chr2_KI270774v1_alt 28135 82 + 223625 CTCTGTAGGACAGCGGCAGCTTCCTCTCACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCGCAC s panTro5.chr2A 1306663 82 + 111504155 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i panTro5.chr2A C 0 T 83 s panPan2.chr2A 1267574 82 + 114371477 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i panPan2.chr2A C 0 T 83 s gorGor5.CYUI01015607v1 1293413 82 + 1464242 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i gorGor5.CYUI01015607v1 C 0 T 83 s nomLeu3.chr19 1024402 82 + 81552678 CTCTCTAGGACAGCAGCAGCTTCCCCTTACTGGGATTGTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i nomLeu3.chr19 T 83 C 0 s macFas5.chr13 1332140 82 - 111193037 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCAC i macFas5.chr13 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301221 84 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383979 84 - 107702431 T e cerAty1.NW_012000820v1 1314124 84 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T a score=273.000000 s hg38.chr2_KI270774v1_alt 28217 1 + 223625 T s nomLeu3.chr19 1024484 1 + 81552678 T i nomLeu3.chr19 C 0 T 83 s macFas5.chr13 1332222 1 - 111193037 T i macFas5.chr13 C 0 T 87 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301221 84 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383979 84 - 107702431 T e cerAty1.NW_012000820v1 1314124 84 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267656 83 + 114371477 T e panTro5.chr2A 1306745 83 + 111504155 T a score=0.000000 s hg38.chr2_KI270774v1_alt 28218 26 + 223625 TTCCCCCTGTTCTGGGCACGCCTGGC e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301221 84 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383979 84 - 107702431 T e cerAty1.NW_012000820v1 1314124 84 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e macFas5.chr13 1332223 87 - 111193037 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267656 83 + 114371477 T e panTro5.chr2A 1306745 83 + 111504155 T a score=77.000000 s hg38.chr2_KI270774v1_alt 28244 3 + 223625 CCA s macFas5.chr13 1332136 3 - 111193037 CCT i macFas5.chr13 T 87 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301221 84 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383979 84 - 107702431 T e cerAty1.NW_012000820v1 1314124 84 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267656 83 + 114371477 T e panTro5.chr2A 1306745 83 + 111504155 T a score=1000.000000 s hg38.chr2_KI270774v1_alt 28247 1 + 223625 G s panTro5.chr2A 1306662 1 + 111504155 G i panTro5.chr2A T 83 C 0 s panPan2.chr2A 1267573 1 + 114371477 G i panPan2.chr2A T 83 C 0 s gorGor5.CYUI01015607v1 1293412 1 + 1464242 G i gorGor5.CYUI01015607v1 T 83 C 0 s macFas5.chr13 1332139 1 - 111193037 G i macFas5.chr13 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301221 84 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383979 84 - 107702431 T e cerAty1.NW_012000820v1 1314124 84 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T a score=107227.000000 s hg38.chr2_KI270774v1_alt 28248 82 + 223625 CTCTGTAGGACAGCGGCAGCTTCCTCTCACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCGCAC s panTro5.chr2A 1306663 82 + 111504155 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i panTro5.chr2A C 0 T 83 s panPan2.chr2A 1267574 82 + 114371477 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i panPan2.chr2A C 0 T 83 s gorGor5.CYUI01015607v1 1293413 82 + 1464242 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i gorGor5.CYUI01015607v1 C 0 T 83 s nomLeu3.chr19 1024402 82 + 81552678 CTCTCTAGGACAGCAGCAGCTTCCCCTTACTGGGATTGTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i nomLeu3.chr19 T 83 C 0 s macFas5.chr13 1332140 82 - 111193037 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCAC i macFas5.chr13 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301221 84 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383979 84 - 107702431 T e cerAty1.NW_012000820v1 1314124 84 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T a score=273.000000 s hg38.chr2_KI270774v1_alt 28330 1 + 223625 T s nomLeu3.chr19 1024484 1 + 81552678 T i nomLeu3.chr19 C 0 T 83 s macFas5.chr13 1332222 1 - 111193037 T i macFas5.chr13 C 0 T 87 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301221 84 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383979 84 - 107702431 T e cerAty1.NW_012000820v1 1314124 84 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267656 83 + 114371477 T e panTro5.chr2A 1306745 83 + 111504155 T a score=0.000000 s hg38.chr2_KI270774v1_alt 28331 26 + 223625 TTCCCCCTGTTCTGGGCGCGCCTGGC e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301221 84 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383979 84 - 107702431 T e cerAty1.NW_012000820v1 1314124 84 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e macFas5.chr13 1332223 87 - 111193037 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267656 83 + 114371477 T e panTro5.chr2A 1306745 83 + 111504155 T a score=77.000000 s hg38.chr2_KI270774v1_alt 28357 3 + 223625 CCA s macFas5.chr13 1332136 3 - 111193037 CCT i macFas5.chr13 T 87 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301221 84 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1383979 84 - 107702431 T e cerAty1.NW_012000820v1 1314124 84 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267656 83 + 114371477 T e panTro5.chr2A 1306745 83 + 111504155 T a score=4500.000000 s hg38.chr2_KI270774v1_alt 28360 1 + 223625 G s panTro5.chr2A 1306662 1 + 111504155 G i panTro5.chr2A T 83 C 0 s panPan2.chr2A 1267573 1 + 114371477 G i panPan2.chr2A T 83 C 0 s gorGor5.CYUI01015607v1 1293412 1 + 1464242 G i gorGor5.CYUI01015607v1 T 83 C 0 s rheMac8.chr13 1359963 1 + 108979918 G i rheMac8.chr13 T 116 C 0 s macFas5.chr13 1332139 1 - 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1360257 1 + 3644372 G i macNem1.NW_012011978v1 T 116 C 0 s cerAty1.NW_012000820v1 1314040 1 - 10304083 G i cerAty1.NW_012000820v1 T 84 C 0 s chlSab2.chr14 1383895 1 - 107702431 G i chlSab2.chr14 T 84 C 0 s colAng1.NW_012118821v1 1301137 1 - 13651311 G i colAng1.NW_012118821v1 T 84 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e manLeu1.NW_012103754v1 863298 1 - 2200435 I e nomLeu3.chr19 1024485 83 + 81552678 T a score=540352.000000 s hg38.chr2_KI270774v1_alt 28361 115 + 223625 CTCTGTAGGACAGCGGCAGCTTCCTCTCACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTGGCACTTTTCCCCCTGTTCTGGGCACGCCTGGCCCAGC s panTro5.chr2A 1306663 115 + 111504155 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTTTTCCCCCTGTTCTGGGCACACCTGGCCCAGC i panTro5.chr2A C 0 T 114 s panPan2.chr2A 1267574 115 + 114371477 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTTTTCCCCCTGTTCTGGGCACACCTGGCCCAGC i panPan2.chr2A C 0 T 114 s gorGor5.CYUI01015607v1 1293413 115 + 1464242 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTTTTTCTCCTGTTCTGGGCACACCTGTCCCAGC i gorGor5.CYUI01015607v1 C 0 T 114 s nomLeu3.chr19 1024402 115 + 81552678 CTCTCTAGGACAGCAGCAGCTTCCCCTTACTGGGATTGTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTCTTCCCCCTGTTCTGGTCACACCTGGCCCAGC i nomLeu3.chr19 T 83 T 114 s rheMac8.chr13 1359964 115 + 108979918 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCACTCTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i rheMac8.chr13 C 0 T 116 s macFas5.chr13 1332140 115 - 111193037 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCACTCTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i macFas5.chr13 C 0 T 114 s macNem1.NW_012011978v1 1360258 115 + 3644372 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCACTCTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i macNem1.NW_012011978v1 C 0 T 116 s cerAty1.NW_012000820v1 1314041 115 - 10304083 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGACTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCACTGTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i cerAty1.NW_012000820v1 C 0 T 116 s chlSab2.chr14 1383896 115 - 107702431 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGACTCTCACTCTTCGCCCTGTTCTGGGCACACCCGGCCCAGC i chlSab2.chr14 C 0 T 116 s colAng1.NW_012118821v1 1301138 115 - 13651311 CTCTCTAGGACAGGAGCAGCTTCCTCTTACTGGGATTATGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGACTCGCACTCTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i colAng1.NW_012118821v1 C 0 T 116 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e manLeu1.NW_012103754v1 863298 1 - 2200435 I a score=105727.000000 s hg38.chr2_KI270774v1_alt 28476 81 + 223625 TCTGTAGGACAGCGGCAGCTTCCTCTCACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCGCAC s panTro5.chr2A 1306664 81 + 111504155 TCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i panTro5.chr2A T 114 T 83 s panPan2.chr2A 1267575 81 + 114371477 TCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i panPan2.chr2A T 114 T 83 s gorGor5.CYUI01015607v1 1293414 81 + 1464242 TCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i gorGor5.CYUI01015607v1 T 114 T 83 s nomLeu3.chr19 1024403 81 + 81552678 TCTCTAGGACAGCAGCAGCTTCCCCTTACTGGGATTGTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i nomLeu3.chr19 T 114 C 0 s macFas5.chr13 1332141 81 - 111193037 TCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCAC i macFas5.chr13 T 114 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T a score=273.000000 s hg38.chr2_KI270774v1_alt 28557 1 + 223625 T s nomLeu3.chr19 1024484 1 + 81552678 T i nomLeu3.chr19 C 0 T 83 s macFas5.chr13 1332222 1 - 111193037 T i macFas5.chr13 C 0 T 87 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267656 83 + 114371477 T e panTro5.chr2A 1306745 83 + 111504155 T a score=0.000000 s hg38.chr2_KI270774v1_alt 28558 26 + 223625 TTCCCCCTGTTCTGGGCGCGCCTGGC e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e macFas5.chr13 1332223 87 - 111193037 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267656 83 + 114371477 T e panTro5.chr2A 1306745 83 + 111504155 T a score=77.000000 s hg38.chr2_KI270774v1_alt 28584 3 + 223625 CCA s macFas5.chr13 1332136 3 - 111193037 CCT i macFas5.chr13 T 87 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267656 83 + 114371477 T e panTro5.chr2A 1306745 83 + 111504155 T a score=1000.000000 s hg38.chr2_KI270774v1_alt 28587 1 + 223625 G s panTro5.chr2A 1306662 1 + 111504155 G i panTro5.chr2A T 83 C 0 s panPan2.chr2A 1267573 1 + 114371477 G i panPan2.chr2A T 83 C 0 s gorGor5.CYUI01015607v1 1293412 1 + 1464242 G i gorGor5.CYUI01015607v1 T 83 C 0 s macFas5.chr13 1332139 1 - 111193037 G i macFas5.chr13 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T a score=106102.000000 s hg38.chr2_KI270774v1_alt 28588 82 + 223625 CTCTGTAGGACAGCGGCAGCTTCCTCTCACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTGGCAC s panTro5.chr2A 1306663 82 + 111504155 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1267574 82 + 114371477 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1293413 82 + 1464242 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i gorGor5.CYUI01015607v1 C 0 T 83 s nomLeu3.chr19 1024402 82 + 81552678 CTCTCTAGGACAGCAGCAGCTTCCCCTTACTGGGATTGTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i nomLeu3.chr19 T 83 C 0 s macFas5.chr13 1332140 82 - 111193037 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCAC i macFas5.chr13 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T a score=910.000000 s hg38.chr2_KI270774v1_alt 28670 1 + 223625 T s panTro5.chr2A 1306745 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1267656 1 + 114371477 T i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1024484 1 + 81552678 T i nomLeu3.chr19 C 0 T 83 s macFas5.chr13 1332222 1 - 111193037 T i macFas5.chr13 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T a score=1272.000000 s hg38.chr2_KI270774v1_alt 28671 3 + 223625 TTT s panTro5.chr2A 1306746 3 + 111504155 TTT i panTro5.chr2A C 0 T 87 s panPan2.chr2A 1267657 3 + 114371477 TTT i panPan2.chr2A C 0 T 87 s macFas5.chr13 1332223 3 - 111193037 CTT i macFas5.chr13 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T a score=100.000000 s hg38.chr2_KI270774v1_alt 28674 1 + 223625 C s macFas5.chr13 1332226 1 - 111193037 C i macFas5.chr13 C 0 T 91 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267660 87 + 114371477 T e panTro5.chr2A 1306749 87 + 111504155 T a score=0.000000 s hg38.chr2_KI270774v1_alt 28675 22 + 223625 CCCTGTTCTGGGCACGCCTGGC e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e macFas5.chr13 1332227 91 - 111193037 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267660 87 + 114371477 T e panTro5.chr2A 1306749 87 + 111504155 T a score=77.000000 s hg38.chr2_KI270774v1_alt 28697 3 + 223625 CCA s macFas5.chr13 1332136 3 - 111193037 CCT i macFas5.chr13 T 91 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267660 87 + 114371477 T e panTro5.chr2A 1306749 87 + 111504155 T a score=4500.000000 s hg38.chr2_KI270774v1_alt 28700 1 + 223625 G s panTro5.chr2A 1306662 1 + 111504155 G i panTro5.chr2A T 87 C 0 s panPan2.chr2A 1267573 1 + 114371477 G i panPan2.chr2A T 87 C 0 s gorGor5.CYUI01015607v1 1293412 1 + 1464242 G i gorGor5.CYUI01015607v1 T 83 C 0 s rheMac8.chr13 1359963 1 + 108979918 G i rheMac8.chr13 T 116 C 0 s macFas5.chr13 1332139 1 - 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1360257 1 + 3644372 G i macNem1.NW_012011978v1 T 116 C 0 s cerAty1.NW_012000820v1 1314040 1 - 10304083 G i cerAty1.NW_012000820v1 T 116 C 0 s chlSab2.chr14 1383895 1 - 107702431 G i chlSab2.chr14 T 116 C 0 s colAng1.NW_012118821v1 1301137 1 - 13651311 G i colAng1.NW_012118821v1 T 116 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e manLeu1.NW_012103754v1 863298 1 - 2200435 I e nomLeu3.chr19 1024485 83 + 81552678 T a score=540352.000000 s hg38.chr2_KI270774v1_alt 28701 115 + 223625 CTCTGTAGGACAGCGGCAGCTTCCTCTCACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTGGCACTTTTCCCCCTGTTCTGGGCACGCCTGGCCCAGC s panTro5.chr2A 1306663 115 + 111504155 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTTTTCCCCCTGTTCTGGGCACACCTGGCCCAGC i panTro5.chr2A C 0 T 114 s panPan2.chr2A 1267574 115 + 114371477 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTTTTCCCCCTGTTCTGGGCACACCTGGCCCAGC i panPan2.chr2A C 0 T 114 s gorGor5.CYUI01015607v1 1293413 115 + 1464242 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTTTTTCTCCTGTTCTGGGCACACCTGTCCCAGC i gorGor5.CYUI01015607v1 C 0 T 114 s nomLeu3.chr19 1024402 115 + 81552678 CTCTCTAGGACAGCAGCAGCTTCCCCTTACTGGGATTGTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTCTTCCCCCTGTTCTGGTCACACCTGGCCCAGC i nomLeu3.chr19 T 83 T 114 s rheMac8.chr13 1359964 115 + 108979918 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCACTCTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i rheMac8.chr13 C 0 T 116 s macFas5.chr13 1332140 115 - 111193037 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCACTCTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i macFas5.chr13 C 0 T 114 s macNem1.NW_012011978v1 1360258 115 + 3644372 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCACTCTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i macNem1.NW_012011978v1 C 0 T 116 s cerAty1.NW_012000820v1 1314041 115 - 10304083 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGACTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCACTGTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i cerAty1.NW_012000820v1 C 0 T 116 s chlSab2.chr14 1383896 115 - 107702431 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGACTCTCACTCTTCGCCCTGTTCTGGGCACACCCGGCCCAGC i chlSab2.chr14 C 0 T 116 s colAng1.NW_012118821v1 1301138 115 - 13651311 CTCTCTAGGACAGGAGCAGCTTCCTCTTACTGGGATTATGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGACTCGCACTCTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i colAng1.NW_012118821v1 C 0 T 116 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e manLeu1.NW_012103754v1 863298 1 - 2200435 I a score=105727.000000 s hg38.chr2_KI270774v1_alt 28816 81 + 223625 TCTGTAGGACAGCGGCAGCTTCCTCTCACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCGCAC s panTro5.chr2A 1306664 81 + 111504155 TCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i panTro5.chr2A T 114 T 83 s panPan2.chr2A 1267575 81 + 114371477 TCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i panPan2.chr2A T 114 T 83 s gorGor5.CYUI01015607v1 1293414 81 + 1464242 TCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i gorGor5.CYUI01015607v1 T 114 T 83 s nomLeu3.chr19 1024403 81 + 81552678 TCTCTAGGACAGCAGCAGCTTCCCCTTACTGGGATTGTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i nomLeu3.chr19 T 114 C 0 s macFas5.chr13 1332141 81 - 111193037 TCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCAC i macFas5.chr13 T 114 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T a score=273.000000 s hg38.chr2_KI270774v1_alt 28897 1 + 223625 T s nomLeu3.chr19 1024484 1 + 81552678 T i nomLeu3.chr19 C 0 T 83 s macFas5.chr13 1332222 1 - 111193037 T i macFas5.chr13 C 0 T 87 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267656 83 + 114371477 T e panTro5.chr2A 1306745 83 + 111504155 T a score=0.000000 s hg38.chr2_KI270774v1_alt 28898 26 + 223625 TTCCCCCTGTTCTGGGCGCGCCTGGC e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e macFas5.chr13 1332223 87 - 111193037 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267656 83 + 114371477 T e panTro5.chr2A 1306745 83 + 111504155 T a score=77.000000 s hg38.chr2_KI270774v1_alt 28924 3 + 223625 CCA s macFas5.chr13 1332136 3 - 111193037 CCT i macFas5.chr13 T 87 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267656 83 + 114371477 T e panTro5.chr2A 1306745 83 + 111504155 T a score=1000.000000 s hg38.chr2_KI270774v1_alt 28927 1 + 223625 G s panTro5.chr2A 1306662 1 + 111504155 G i panTro5.chr2A T 83 C 0 s panPan2.chr2A 1267573 1 + 114371477 G i panPan2.chr2A T 83 C 0 s gorGor5.CYUI01015607v1 1293412 1 + 1464242 G i gorGor5.CYUI01015607v1 T 83 C 0 s macFas5.chr13 1332139 1 - 111193037 G i macFas5.chr13 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T a score=106102.000000 s hg38.chr2_KI270774v1_alt 28928 82 + 223625 CTCTGTAGGACAGCGGCAGCTTCCTCTCACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTGGCAC s panTro5.chr2A 1306663 82 + 111504155 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1267574 82 + 114371477 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1293413 82 + 1464242 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i gorGor5.CYUI01015607v1 C 0 T 83 s nomLeu3.chr19 1024402 82 + 81552678 CTCTCTAGGACAGCAGCAGCTTCCCCTTACTGGGATTGTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCAC i nomLeu3.chr19 T 83 C 0 s macFas5.chr13 1332140 82 - 111193037 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCAC i macFas5.chr13 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T a score=910.000000 s hg38.chr2_KI270774v1_alt 29010 1 + 223625 T s panTro5.chr2A 1306745 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1267656 1 + 114371477 T i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1024484 1 + 81552678 T i nomLeu3.chr19 C 0 T 83 s macFas5.chr13 1332222 1 - 111193037 T i macFas5.chr13 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T a score=1272.000000 s hg38.chr2_KI270774v1_alt 29011 3 + 223625 TTT s panTro5.chr2A 1306746 3 + 111504155 TTT i panTro5.chr2A C 0 T 87 s panPan2.chr2A 1267657 3 + 114371477 TTT i panPan2.chr2A C 0 T 87 s macFas5.chr13 1332223 3 - 111193037 CTT i macFas5.chr13 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T a score=100.000000 s hg38.chr2_KI270774v1_alt 29014 1 + 223625 C s macFas5.chr13 1332226 1 - 111193037 C i macFas5.chr13 C 0 T 91 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267660 87 + 114371477 T e panTro5.chr2A 1306749 87 + 111504155 T a score=0.000000 s hg38.chr2_KI270774v1_alt 29015 22 + 223625 CCCTGTTCTGGGCACGCCTGGC e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e macFas5.chr13 1332227 91 - 111193037 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267660 87 + 114371477 T e panTro5.chr2A 1306749 87 + 111504155 T a score=77.000000 s hg38.chr2_KI270774v1_alt 29037 3 + 223625 CCA s macFas5.chr13 1332136 3 - 111193037 CCT i macFas5.chr13 T 91 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 116 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 116 - 107702431 T e cerAty1.NW_012000820v1 1314156 116 - 10304083 T e macNem1.NW_012011978v1 1360373 116 + 3644372 T e rheMac8.chr13 1360079 116 + 108979918 T e nomLeu3.chr19 1024485 83 + 81552678 T e gorGor5.CYUI01015607v1 1293495 83 + 1464242 T e panPan2.chr2A 1267660 87 + 114371477 T e panTro5.chr2A 1306749 87 + 111504155 T a score=4500.000000 s hg38.chr2_KI270774v1_alt 29040 1 + 223625 G s panTro5.chr2A 1306662 1 + 111504155 G i panTro5.chr2A T 87 C 0 s panPan2.chr2A 1267573 1 + 114371477 G i panPan2.chr2A T 87 C 0 s gorGor5.CYUI01015607v1 1293412 1 + 1464242 G i gorGor5.CYUI01015607v1 T 83 C 0 s rheMac8.chr13 1359963 1 + 108979918 G i rheMac8.chr13 T 116 C 0 s macFas5.chr13 1332139 1 - 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1360257 1 + 3644372 G i macNem1.NW_012011978v1 T 116 C 0 s cerAty1.NW_012000820v1 1314040 1 - 10304083 G i cerAty1.NW_012000820v1 T 116 C 0 s chlSab2.chr14 1383895 1 - 107702431 G i chlSab2.chr14 T 116 C 0 s colAng1.NW_012118821v1 1301137 1 - 13651311 G i colAng1.NW_012118821v1 T 116 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e manLeu1.NW_012103754v1 863298 1 - 2200435 I e nomLeu3.chr19 1024485 83 + 81552678 T a score=540352.000000 s hg38.chr2_KI270774v1_alt 29041 115 + 223625 CTCTGTAGGACAGCGGCAGCTTCCTCTCACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTGGCACTTTTCCCCCTGTTCTGGGCACGCCTGGCCCAGC s panTro5.chr2A 1306663 115 + 111504155 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTTTTCCCCCTGTTCTGGGCACACCTGGCCCAGC i panTro5.chr2A C 0 T 114 s panPan2.chr2A 1267574 115 + 114371477 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTTTTCCCCCTGTTCTGGGCACACCTGGCCCAGC i panPan2.chr2A C 0 T 114 s gorGor5.CYUI01015607v1 1293413 115 + 1464242 CTCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTTTTTCTCCTGTTCTGGGCACACCTGTCCCAGC i gorGor5.CYUI01015607v1 C 0 T 114 s nomLeu3.chr19 1024402 115 + 81552678 CTCTCTAGGACAGCAGCAGCTTCCCCTTACTGGGATTGTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTCTTCCCCCTGTTCTGGTCACACCTGGCCCAGC i nomLeu3.chr19 T 83 T 114 s rheMac8.chr13 1359964 115 + 108979918 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCACTCTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i rheMac8.chr13 C 0 T 27 s macFas5.chr13 1332140 115 - 111193037 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCACTCTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i macFas5.chr13 C 0 T 114 s macNem1.NW_012011978v1 1360258 115 + 3644372 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCACTCTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i macNem1.NW_012011978v1 C 0 T 27 s cerAty1.NW_012000820v1 1314041 115 - 10304083 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGACTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCACTGTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i cerAty1.NW_012000820v1 C 0 T 27 s chlSab2.chr14 1383896 115 - 107702431 CTCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGACTCTCACTCTTCGCCCTGTTCTGGGCACACCCGGCCCAGC i chlSab2.chr14 C 0 I 180 s colAng1.NW_012118821v1 1301138 115 - 13651311 CTCTCTAGGACAGGAGCAGCTTCCTCTTACTGGGATTATGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGACTCGCACTCTTCGCCCTGTTCTGGGCACACCTGGCCCAGC i colAng1.NW_012118821v1 C 0 T 27 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e manLeu1.NW_012103754v1 863298 1 - 2200435 I a score=109940.000000 s hg38.chr2_KI270774v1_alt 29156 86 + 223625 TCTGTAGGACAGCGGCAGCTTCCTCTCACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTGGCACTTTTC s panTro5.chr2A 1306664 86 + 111504155 TCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTTTTC i panTro5.chr2A T 114 C 0 s panPan2.chr2A 1267575 86 + 114371477 TCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTTTTC i panPan2.chr2A T 114 C 0 s gorGor5.CYUI01015607v1 1293414 86 + 1464242 TCTGTAGGACAGCAGCAGCTTCCTCTTACTGGGACTTTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTTTTT i gorGor5.CYUI01015607v1 T 114 C 0 s nomLeu3.chr19 1024403 86 + 81552678 TCTCTAGGACAGCAGCAGCTTCCCCTTACTGGGATTGTTAATTTGGGAAGCAGGACATGCATAGGAAGAGTGGACTCTCACTCTTC i nomLeu3.chr19 T 114 C 0 s macFas5.chr13 1332141 86 - 111193037 TCTCTAGGACAGCAGCAGCTTCCTCTTACTGGGATTGTGAATTTGGGAAGCAGGACGTGCATAGGAAGAGTGGAGTCTCACTCTTC i macFas5.chr13 T 114 I 1 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1301253 27 - 13651311 T e manLeu1.NW_012103754v1 863298 1 - 2200435 I e chlSab2.chr14 1384011 180 - 107702431 I e cerAty1.NW_012000820v1 1314156 27 - 10304083 T e macNem1.NW_012011978v1 1360373 27 + 3644372 T e rheMac8.chr13 1360079 27 + 108979918 T a score=5500.000000 s hg38.chr2_KI270774v1_alt 29242 1 + 223625 C s panTro5.chr2A 1306750 1 + 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1267661 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1293500 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 I 14 s nomLeu3.chr19 1024489 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1360052 1 + 108979918 C i rheMac8.chr13 T 27 C 0 s macFas5.chr13 1332228 1 - 111193037 C i macFas5.chr13 I 1 C 0 s macNem1.NW_012011978v1 1360346 1 + 3644372 C i macNem1.NW_012011978v1 T 27 C 0 s cerAty1.NW_012000820v1 1314129 1 - 10304083 C i cerAty1.NW_012000820v1 T 27 C 0 s manLeu1.NW_012103754v1 863299 1 - 2200435 C i manLeu1.NW_012103754v1 I 1 C 0 s colAng1.NW_012118821v1 1301226 1 - 13651311 C i colAng1.NW_012118821v1 T 27 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e chlSab2.chr14 1384011 180 - 107702431 I a score=9000.000000 s hg38.chr2_KI270774v1_alt 29243 2 + 223625 CC s panTro5.chr2A 1306751 2 + 111504155 CC i panTro5.chr2A C 0 I 12 s panPan2.chr2A 1267662 2 + 114371477 CC i panPan2.chr2A C 0 I 12 s nomLeu3.chr19 1024490 2 + 81552678 CC i nomLeu3.chr19 C 0 I 12 s rheMac8.chr13 1360053 2 + 108979918 CC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1332229 2 - 111193037 CC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1360347 2 + 3644372 CC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1314130 2 - 10304083 CC i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 863300 2 - 2200435 CC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1301227 2 - 13651311 CC i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e chlSab2.chr14 1384011 180 - 107702431 I e gorGor5.CYUI01015607v1 1293501 14 + 1464242 I a score=21423.000000 s hg38.chr2_KI270774v1_alt 29245 11 + 223625 TGTTCTGGGCG s rheMac8.chr13 1360055 11 + 108979918 TGTTCTGGGCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1332231 11 - 111193037 TGTTCTGGGCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1360349 11 + 3644372 TGTTCTGGGCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1314132 11 - 10304083 TGTTCTGGGCA i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 863302 11 - 2200435 TGTTCTGGGCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1301229 11 - 13651311 TGTTCTGGGCA i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e chlSab2.chr14 1384011 180 - 107702431 I e nomLeu3.chr19 1024492 12 + 81552678 I e gorGor5.CYUI01015607v1 1293501 14 + 1464242 I e panPan2.chr2A 1267664 12 + 114371477 I e panTro5.chr2A 1306753 12 + 111504155 I a score=76193.000000 s hg38.chr2_KI270774v1_alt 29256 15 + 223625 CGCCTGGCCCAGCAG s panTro5.chr2A 1306765 15 + 111504155 CACCTGGCCCAGCAG i panTro5.chr2A I 12 C 0 s panPan2.chr2A 1267676 15 + 114371477 CACCTGGCCCAGCAG i panPan2.chr2A I 12 C 0 s gorGor5.CYUI01015607v1 1293515 15 + 1464242 CACCTGTCCCAGCAG i gorGor5.CYUI01015607v1 I 14 C 0 s nomLeu3.chr19 1024504 15 + 81552678 CACCTGGCCCAGCAG i nomLeu3.chr19 I 12 C 0 s rheMac8.chr13 1360066 15 + 108979918 CACCTGGCCCAGCAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1332242 15 - 111193037 CACCTGGCCCAGCAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1360360 15 + 3644372 CACCTGGCCCAGCAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1314143 15 - 10304083 CACCTGGCCCAGCAG i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 863313 15 - 2200435 CGCCTGGCCCAGCAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1301240 15 - 13651311 CACCTGGCCCAGCAG i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e chlSab2.chr14 1384011 180 - 107702431 I a score=3883666.000000 s hg38.chr2_KI270774v1_alt 29271 697 + 223625 CCCTGCCGATAGGGCCACCC-TCCGCCCTGCCTGGCACTGGAACTCCTGAGAGCCCCCCGCATCCAAGGATGTCTCTGGAGGCAGGAAGCCCCAGTCCTAGGGAGGGTAGAGGGCAGGCTCACCCTGACCACAGGGTGCACAGCTGATTGTGGTCTCAGTCCCCATCTCCAGCTCTGATGTCCGGACTTGCTCAAGCAGGAAGTCCTGTTTGTTCTGCACA-TCCCACCCAACCTCTCCAGTGCCGAATTCCAGGGGCAGCCAGGACATGAACTGGAGGGGCAAGCTCCCTCCAACGCGGGCTTCAGCATTCACAACTAGAGGAAGACGAAGAGGATGGCAACAGGaaatcgaatgctgcc-aaatacttacaggtttattctgagccaacagagtgactgcgacctggggacacacagtctcctgaggtcccaaga------aggtgcacctgaggcagtcgggttgcagtttggt----ttcatacatttcaggctgacagaatctcatgtg-aaccgtaagtcagtgcatggagggtgtgcactgcttcagcctggaaaagtgggtatctccaagcgggggcttacaagtcataggtgggttttggggattctttagctggcagttggttgaaagagctaagctttgtctaaagacttgaggtcagtgggaaggaacactgaagttaagatgaagTCATCTGCATCCA s panTro5.chr2A 1306780 698 + 111504155 CCCTGCCGATAGGACCACCCCTCCACCCTGCCTGGCACTGGAACTCCTGAGAGCCCCCCACATCCAAGGATGTCTCTGGAGGCAGGAAGCCCCAGTCCCAGGGAGGGTAGAGGGCAGGCTCACCCTGACCACAGGGTGCACAGCTGATTGTGGTCTCAGTCCCCATCTCCAGCTCTGATGTCCAGACTTGCTCAAGCAGGAAGTCCTGTTTGTTCTGCACA-TCCCACCCAACCTCTCCAGTGCCGAATTCCAGGGGCAGCCAGGACATGAACTGGAGGGGCAAGCTCCCTCCAACGCGGGCTTCAGCATTCACAACTAGAGGAAGATGAAGAAGATGGCAACAGGaaatcgaatgctgcc-aaatacttaaaggtttattctgagccaacagagtgactgcgacctggggacacacagtctcctgaggtcccaaga------aggtgcacctgaggcagtcgggttgcagtttggt----ttcatacatttcaggctgacagaatctcacgtg-aaccgtaagtcagtgcatggacggtgtgcactggttcagcctggaaaagtgggtatctccaagtgggggcttacaagtcataggtgggttttggggattctttagctggcagttggttgaaagagctaagctttgtctaaagacttgaggtcagtgggaaggaacactgaagttaagatgaaggCATctgcattca i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1267691 698 + 114371477 CCCTGCCGATAGGACCACCCCTCCACCCTGCCTGGCACTGGAACTCCTGAGAGCCCCCCACATCCAAGGATGTCTCTGGAGGCAGGAAGCCCCAGTCCCAGGGAGGGTAGAGGGCAGGCTCACCCTGACCACAGGGTGCACAGCTGATTGTGGTCTCAGTCCCCATCTCCAGCTCTGATGTCCAGACTTGCTCAAGCAGGAAGTCCTGTTTATTCTGCATA-TCCCACCCAACCTCTCCAGTGCCGAATTCCAGGGGCAGCCAGGACATGAACTGGAGGGGCAAGCTCCCTCCAACGCGGGCTTCAGCATTCACAACTAGAGGAAGATGAAGAGGATGGCAACAGGaaatcgaatgctgcc-aaatacttaaaggtttattctgagccaacagagtgactgcgacctggggacacacagtctcctgaggtcccaaga------aggtgcacctgaggcagtcgggttgcagtttggt----ttcatacatttcaggctgacagaatctcacgtg-aaccgtaagtcagtgcatggacggtgtgcactggttcagcctggaaaagtgggtatctccaagtgggggcttacaagtcataggtgggttttggggattctttagctggcagttggttgaaagagctaagctttgtctaaagacttgaggtcagtgggaaggaacactgaagttaagatgaaggCATctgcattca i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1293530 699 + 1464242 CCCTGCCGATAGGACCACCCCTCCACCCTACCTGGCACTGGAACTCCTGAGAGCCCCCCACATCCAAGGATGTCTCTGGAGGCAGGAAGCCCCAGTCCCAGGGAGGATAGAGGGCAGGCTCACCCTGACCACAGGGTGCACAGCTGATTGTGGTCTCAGTCCCCATCTCCAGCTCTGATGTCCAGACTTGCTCCAGCAGAAAGTCCTGTTTGCTCTGCACATTCCCACCCAACCTCTCCAGTGCCAAATTCCAGGGGCAGCCAGGACATGAACTGGAGGGGCAAGCTCCCTCCAACACGGGCTTCAGCATTCACAACTAGAGGAAGATGAAGAGGATGGCAACAGGaaatcgaatgctgcc-aaatacttaaaggtttattctgagccaacagagtgactgcgacctggggacacacagtctcctgaggtcccaaga------aggtgcacctgaggcagtcgggttgcagtttggt----ttcatacatttcaggctgacagaatctcacgtg-aaccataagtcagtgcatggacggtgtgcactgattcagcctggaaaagtgggtatctccaagtggggacttacaagtcataggtgggttttggggattctttagctggcagttggttgaaagagctaagctttgtctaaagacttgaggtcagtgggaaggaacactgaagttaagatgaaggCATctgcatcca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1024519 700 + 81552678 CCCTGCCGATAGGACCACCCCTCCACCCTGCCTGGCACTGGAACTCCTGAGAGCCCCCCACATCTAAGGATGTCTCTGGAGGCAGGAAGCCTCAGTCCCAGGGAGGGTAGAGGGCAGGCTCACCCTGACCAC--GGTGCAGAGCTGACTGTGGTCTCAGTCCCCATCTCCAGCTCTGATGTCCAGACTTGCTCAAGCAGGAAGTCCTGTTTGCTCTGCACA-TCCCACCCAACCTCTCCAGTGCCGAATTCCAGGGGCAGCCAGGACATGAACTGGAGGGGCAAGCTCCCTCCAACGCAGGCTTCAGCATTCACAACTAGAGGAAGATGAAGAGGATGGCAACAGGaaatcgaatgctgcc-aaatacttaaaggtttattctgagccaacagagtgactgcgacctggggacacacagtctcctgaggtcccaaga------agatgcacctgaggcagtcgggttgcagtttggtttcattcatacatttcaggctgacagaatcgcaggtg-aatcataagtcagtgcatggaggatgtgcactggttcagcctgaaaaggtgggtatctccaagtgggggcttacaagtcataggtgtgttttggggattctttagctgacagttggttgaaagagctaagctttgtctaaagacttgaggtcagtgggaaggaacactgaagttaagatgagggcatctgcatcca i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1360081 689 + 108979918 CCCTGCCGATAGGACCACCCCTCCACCCTGCCCGGCACTGGGACTCCTGAGAGCCGCCCACATCCAAGGATGTCTCTGGAGGCAGGAAGCCCCCGTCCCAGGGAGGGCAGAGGGCAGGCTTGCCCCGACCAC---------AGCTGATTGTGGTCTCAGTCCCCATGTCCAGCTCTGATGTCCAGACTTGCTTGAGCAGGAAGTCCCGTTTGCTCCACACA-TCTCACCCAGCCTCTGCAGTGCCAAGTTCCAGGGGCAGCCAGGACATGAACCAGAGGGGCAAGCTCCCTGCAATGCGGGCTTCAGCATTCACAACTAGAGGAAGATAAAGAGGATGGCAACagaaaatcgaatgctgccaaaatacttaaaggtttattctgagccaacagagtgactgtgacctggggacacacagcctcctgaggtcccaagaaggtgcaggtgcacctga-gcagccgggttgcaatttgct----ttcatacatttcagggtgacggaatctcaggtgaaatcagaagtcagtgcatggagggtgtgcactggttcagcctggaaaggtgggcatctccaagtgggggcttacaagtcataggtgggttttggggattctttagctggcagttggttgaaagagctaagctttgtctca-------ggttcagtgtgaagtaacactgaagttaagatgagggCATCTGCATCCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1332257 689 - 111193037 CCCTGCCGATAGGACCACCCCTCCACCCTGCCCGGCACTGGGACTCCTGAGAGCCGCCCACATCCAAGGATGTCTCTGGAGGCAGGAAGCCCCCGTCCCAGGGAGGGCAGAGGGCAGGCTCACCCCGACCAC---------AGCTGATTGTGGTCTCAGTCCCCATGTCCAGCTCTGACGTCCAGACTTGCTTGAGCAGGAAGTCCTGTTTGCTCCACACA-TCTCACCCAGCCTCTCCAGTGCCAAGTTCCAGGGGCAGCCAGGACATGAACCAGAGGGGCAAGCTCCCTGCAATGCGGGCTTCAGCATTCACAACTAGAGGAAGATAAAGAGGATGGCAACagaaaatcgaatgctgccaaaatacttaaaggtttattctgagccaacagagtgactgtgacctggggacacacagcctcctgaggtcccaagaaggtgcaggtgcacctga-gcagccgggttgcaatttgct----ttcatacatttcagggtgacggaatctcaggtgaaatcagaagtcagtgcatggagggtgtgcactggttcagcctggaaaggtgggcatctccaagtgggggcttacaagtcataggtgggttttggggattctttagctggcagttggttgaaagagctaagctttgtctca-------ggttcagtgtgaagtaacactgaagttaagatgagggCATCTGCATCCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1360375 689 + 3644372 CCCTGCCGATAGGACCACCCCTCCACCCTGCCCGGCACTGGGACTCCTGAGAGCCGCCCACATCCAAGGATGTCTCTGGAGGCAGGAAGCCCCCGTCCCAGGGAGGGCAGAGGGCAGGCTTGCCCCGACCAC---------AGCTGATTGTGGTCTCAGTCCCCATGTCCAGCTCTGATGTCCAGACTTGCTTGAGCAGGAAGTCCTGTTTGCTCCACACA-TCTCACCCAGCCTCTCCAGTGCCAAGTTCCAGGGGCAGCCAGGACATGAACCAGAGGGGCAAGCTCCCTGCAATGCGGGCTTCAGCATTCACAACTAGAGGAAGATAAAGAGGATGGCAACAGAAAATTGAATGCTGCCaaaatacttaaaggtttattctgagccaacagagtgactgtgacctggggacacacagcctcctgaggtcccaagaaggtgcaggtgcacctga-gcagccgggttgcaatttgct----ttcatacatttcagggtgacggaatctcaggtgaaatcagaagtcagtgcatggagggtgtgcactggttcagcctggaaaggtgggcatctccaagtgggggcttacaagtcataggtgggttttggggattctttagctggcagttggttgaaagagctaagctttgtctca-------agttcagtgtgaagtaacactgaagttaagatgagggCATCTGCATCCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1314158 696 - 10304083 CCCTGCCGATAGGACCACCCCTCCACCCTGCCCGGCACTGGGACTCCTGAGAGCCGCCCACTTCCAAGGATGTCTCTGGAGGCAGGAAGCCCCCGTCCCAGGGAGGGCAGAGGGCAGGCTCGCCCCGACCAC---------AGCTGATTGTGGTCTCAGTCCCCATCTCCAGCTCCGATGTCCAGACTTGCTTGAGCAGGAAGTCCTGTTTGCTCTGCACA-TCCCACCCAGCCTCTCCAGTGCTGAGTTCCAGGGGCAGCCAGGACATGAACCAGAGGGGCAAGCTCCCTGCAATGCGGGCTTCAGCATTCACAACTagaggaagacgaagaggatggcaacaggaaATTGAATGCTGCCaaaatacttaaaggtttattctgagccaacagagtgactgcgacctcgggacacacagtctcctgaggtcccaagagggtgcaggtgcacctga-gcagccgggttgcaatttgct----ttcatacatttcagggtgacggaatctcaggtgaaatcagaagtcagtgcgtggagggtgtgcactggttcagcctggaaaggtgggcatctccaagtgggggcttacaagtcataggtgggttttggggattctttagctggcagttggttgaaagagctaagctttgtctgaagacttgaggtcagtatgaagtaacactgaagttaagatgagggCATCTGCATCCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1384191 696 - 107702431 CCCTGCCGATAGGACCACCCCTCCACCCTGCCTGGGACTGGGACTCCTGAGAGCCGCCCACATCCAAGGATGTCTCTGGAGGCAGGAAGCCCCAGTTCCAGGGAGGGCAGAGGGCAGGCTCGCCCCGACCAC---------AGCTGATTGTGGTCTCAGTCCCCATCTCCAGCTCTGATGTCCAGACTTGCTTGAGCAGGAAGTCCTGTTTGCTCCACACA-TCCCACCCAGCCTCTCCAGTGCCACGTTCCAGGGGCAGCCAGGACATGAACCAGAGGGGCAAGCTCCCTGCAATGCGGGCTTCAGCATTCACAACTAGAGGAAGATGAAGAGGATGGCAACAGGaaatcgaatgctgccaaaatacttaaaggtttattctgagccaacagagtgactgcgacctcgggacacacagtctcctgaggtcccaagaaggtgcaggtgcacttga-gcagccgggttgcaatttgct----ttcatacatttcagggtgacggaatctcaggtgaaatcagaagtcagtgcatggagggtgtgcactggttcagcctggaaaggtgggcatctccaagtgggggtttacaagtcataggtgggttttggggactctttagctggcagttgtttgaaagagctaagctttgtctgaagacttgaggttagtgtgaagtaacactgaagttaagatgaggACATCTGCATCCA i chlSab2.chr14 I 180 I 565 s manLeu1.NW_012103754v1 863328 696 - 2200435 CCCTGCCGATAGGACCACCCCTCCACCCTGCCCGGCTCTGGGACTCCTGAGAGCCGCCCACTTCCAAGGATGTCCCTGGAGGCAGGAAGCCCCCGTCCCAGGGAGGGCAGAGGGCAGGCTCGCCCCGACCAC---------AGCTGATTGTGGTCTCAGTCCCCATCTCCAGCTCCGATGTCCAGACTTGCTTGAGCAAGAAGTCCTGTTTGCTCCACACA-TCCCACCCAGCCTCTCCAGTGCTGAGTTCCAGGGGCAGCCAGGACATGAACCAGAGGGGCAAGCTCCCTGCAATGCGGGCTTCAGCATTCACAACTAGAGGAAGACGAAGAGGATGGCAACagaaaatcgaatgctgccaaaatacttaaaggtttattctgagccaacagagtgactgcgacctggggacacacagcctcctgagatcccaagagggtgcaggtgcacctga-gcagccaggttgcaatttgct----ttcatacatttcagggtgacggaatctgaggtgaaatcagaagtcagtgcatggagggtgtgcactggttcagcctggaaaggtgggcatctccaagtgggggcttacaagtcataggtgggttttggggattctttagctggcagttggttgaaagagctaagctttgtctgaagacttgaggtcagtatgaagtaacactgaagttaagatgagggcatctgcatcca i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1301255 696 - 13651311 CCCTGCCAATAGGACCACCCCTCCACCCTGCCTGGCACTGGGACTCCTGAGAGCCGCCCACATCCAAGGATGTCTCTGGAGACAGGAAGCCCCAGTCCCAGGGAGGGCAGAGGGCAGGCTCGCCCCGACCAC---------AGCTGATTGTGGTCTCAGTCCCCATCTGCAGCTCTGATGTCCAGACTTGCTTGAGCAGGAAGTCCTGTTTGCTCCGCACA-TCCCACCCAACCTCTCCAGTGCCGAGTTCCAGGGGCAGCCAGGACATGAACCGGAGGGGCAAGCTCCCTGCAGTGCAGGCTTCAGCATTCACAACTAGAGGAAGACGAAGAGGATGGCAACAGGaaatcgaatgctgccaaaatacttaaagatttattctgagctgacagagtgactgcaacctggcaacacacagcctcctgaggtcccaagaaggtgcaggtgcacctga-gcagccaggttgcaatttggt----ttcatacatttcagggtgacagaatcgcaggtgaaatcagaagtcagtgcatggagggtgtacactggttcagcctggaaaggtgggcatctccaagtaggggcttacaagtcataggtgggttttggggattctttagctggcagttggttgaaagagctaagctttgtctggagacttgaggtcagtgtgaagtaacactgaagttaagatgagggCATCTGCATCCA i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C a score=301258.000000 s hg38.chr2_KI270774v1_alt 29968 68 + 223625 CCAcgtcatgctgtaccagagtcagggtggaaagtcaaccacatcatacagattaattaaaaaaaaaa s panTro5.chr2A 1307478 68 + 111504155 ccatgtcatgctgtaccagagtcagggtggaaagtcaaccacatcatacagattaattaaaaaaaaaa i panTro5.chr2A C 0 I 2 s panPan2.chr2A 1268389 68 + 114371477 ccatgtcatgctgtaccagagtcagggtggaaagtcaaccacatcatacagattaattaaaaaaaaaa i panPan2.chr2A C 0 I 1 s gorGor5.CYUI01015607v1 1294229 68 + 1464242 ccatgtcatgctgtaccagagtcagggtggaaagtcaaccacatcatacagattaattaaaaaaaaaa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1025219 68 + 81552678 ccatgtcatgctataccagagtcagggtggaaagtcaaccacatcaaatggattaatttaaaaaacaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1360770 68 + 108979918 CCATgtcatgctgtaccaaagtcaggctggaaagtcaaccatatcacatggattaataagaaaaaaaa i rheMac8.chr13 C 0 I 3 s macFas5.chr13 1332946 68 - 111193037 CCATgtcatgctgtaccaaagtcaggctggaaagtcaaccatatcacatggattaataagaaaaaaaa i macFas5.chr13 C 0 I 3 s macNem1.NW_012011978v1 1361064 68 + 3644372 CCATgtcatgctgtaccaaagtcaggctggaaagtcaaccatatcacatggattaataagaaaaaaaa i macNem1.NW_012011978v1 C 0 I 3 s cerAty1.NW_012000820v1 1314854 68 - 10304083 CCATgtcatgctgtaccaaagtcaggctggaaagtcaaccacatcatacggattaataagaaaaaaaa i cerAty1.NW_012000820v1 C 0 I 3 s manLeu1.NW_012103754v1 864024 68 - 2200435 ccatgtcatgctgtaccaaagtcaggctggaaagtcaaccatatcacatggtttaataagaaaaaaaa i manLeu1.NW_012103754v1 C 0 I 3 s colAng1.NW_012118821v1 1301951 68 - 13651311 CCATgtcatgctgtgccaaagtttggctggaaagtcagccacatcatacggattaataagaaaaaaaa i colAng1.NW_012118821v1 C 0 I 430 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e chlSab2.chr14 1384887 565 - 107702431 I a score=370642.000000 s hg38.chr2_KI270774v1_alt 30036 99 + 223625 tctgttcaaggggatttaatggtttgtagggcacaactccccaggccctttagaaaggaatttgggaaagagga-aaaaaaaggtgagagctcagtactc s panTro5.chr2A 1307548 99 + 111504155 tctgttcaaggggatttaatggtttgtagggcacaactccccaggccctttagaaaggaatttgggaaagagga-aaaaaaaggtcagagctcagtactc i panTro5.chr2A I 2 C 0 s panPan2.chr2A 1268458 99 + 114371477 tctgttcaaggggatttaatggtttgtagggcacaactccccaggccctttagaaaggaatttgggaaagagga-aaaaaaaggtcagagctcagtactc i panPan2.chr2A I 1 C 0 s gorGor5.CYUI01015607v1 1294297 99 + 1464242 tctgttcaaggggatttaatggtttgtagggcacaactccccaggccctttagaaaggaatttgggaaagagga-aaaaaaaggtcagagctcagtactc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1025287 99 + 81552678 tctgttcaaggggattttatggtttgtagggcacaagtccccaggccctttagaaaggaatttgggaaagagga-aaaaaaaggtcagagctcagtcctc i nomLeu3.chr19 C 0 I 2 s rheMac8.chr13 1360841 99 + 108979918 tctgttcaaggggattttatggtttatagggcacaactccccgggccctttagaaaggaatttggtaaagagga-aaaaaatagtcagagctcagtcatc i rheMac8.chr13 I 3 I 2 s macFas5.chr13 1333017 99 - 111193037 tctgttcaaggggattttatggtttatagggcacaactccccgggccctttagaaaggaatttggtaaagagga-aaaaaatagtcagagctcagtcatc i macFas5.chr13 I 3 I 2 s macNem1.NW_012011978v1 1361135 99 + 3644372 tctgttcaaggggattttatggtttatagggcacaactccccgggccctttagaaaggaatttggtaaagagaa-aaaaaatagtcagagctcagtcatc i macNem1.NW_012011978v1 I 3 I 2 s cerAty1.NW_012000820v1 1314925 100 - 10304083 tctgttcaaggggattttatggtttgtagggcacaactccccgggccctttagaaaggaattccgtaaagaggagaaaaaaaggtcagagctcagtcATT i cerAty1.NW_012000820v1 I 3 I 2 s manLeu1.NW_012103754v1 864095 99 - 2200435 tctgttcaaggggattttatggtttgtagggcacaactcccggggccctttagaaaggaattccgtaaagagga-aaaaaaaggtcagagctcagtcATT i manLeu1.NW_012103754v1 I 3 I 2 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1302019 430 - 13651311 I e chlSab2.chr14 1384887 565 - 107702431 I a score=236987.000000 s hg38.chr2_KI270774v1_alt 30135 73 + 223625 GGAACAGGAAGGTGAAGCCCTTCTAGTCCCAGTGCTAACCCTACCCAGGTAGCACCATAACAGGCAGGGGCTC s panTro5.chr2A 1307647 73 + 111504155 GGAACAGGAAGGTGAAGCCCTTCTAGTCCCAGTGCTAACCCTTCCCAGGTAGCACCATAACAGGCAGGGGCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1268557 73 + 114371477 GGAACAGGAAGGTGAAGCCCTTCTAGTCCCAGTGCTAACCCTTCCCAGGTAGCACCATAACAGGCAGGGGCTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1294396 73 + 1464242 GGAACAGGAAGGTGAAGCCCTTCTAGTCCCAGTGCTAACCCTACCCAGGTAGCACCATAACAGGCAGGGGCTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1025388 23 + 81552678 GGAACAGGAAGGTGAAGCCCT--------------------------------------------------TC i nomLeu3.chr19 I 2 C 0 s rheMac8.chr13 1360942 65 + 108979918 GGAACAGGAAGGTAAAGCCCTTCTGGTCCCAGTGCTAACCCTA-CCAGGCACCACCATAACAGGCA------- i rheMac8.chr13 I 2 C 0 s macFas5.chr13 1333118 65 - 111193037 GGAACAGGAAGGTAAAGCCCTTCTGGTCCCAGTGCTAACCCTA-CCAGGCACCACCATAACAGGCA------- i macFas5.chr13 I 2 C 0 s macNem1.NW_012011978v1 1361236 65 + 3644372 GGAACAGGAAGGTAAAGCCCTTCTGGTCCCAGTGCTAACCCTA-CCAGGCACCACCATAACAGGCA------- i macNem1.NW_012011978v1 I 2 C 0 s cerAty1.NW_012000820v1 1315027 66 - 10304083 GGAACAGGAAGGTGAAGCCCTTCTGGTGCCAGTGCTAACCCTACCCAGGCACCACCATAACAGGCA------- i cerAty1.NW_012000820v1 I 2 C 0 s chlSab2.chr14 1385452 66 - 107702431 GGAACAGGAAGGTAAAGCCCTTCTGGTCCCAGTGCTAACCCTACCCAGGTACCAACGTAACAGGCA------- i chlSab2.chr14 I 565 C 0 s manLeu1.NW_012103754v1 864196 66 - 2200435 GGAACAGGAAGGTGAAGCCCTTCTGGTGCCAGTGCTAACCCTACCCAGGCACCACCATAACAGGCA------- i manLeu1.NW_012103754v1 I 2 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e colAng1.NW_012118821v1 1302019 430 - 13651311 I a score=753786.000000 s hg38.chr2_KI270774v1_alt 30208 178 + 223625 TGGTCCCAGCACTAACCCTACCCAGGCATCACCATAACAGGTAGGGGGCTTTGGGTCCTTGAGTAAGAAGATCAAAACTTGAGAGGGGTTAGAGCTCCAGCCAGGGATCCTGCAGGGCAGGGTCCAGTAGCCTCCTGACCAGCCTGTGGGTCTTCCTGGTGTTAAGGCTCAGCCCATG s panTro5.chr2A 1307720 178 + 111504155 TGGTCCCAGCACTAACCCTACCCAGGCATCACCATAACAGGTAGGGGGCTTTGGGTCCTCAAGTAAGAAGATCAAGACTTGAGAGGGGTTAGAGCTCCAGCCAGGGCTCCTGCAGGGCAGGGTCCAATAGCCTCCTGACCAGCCTGTGGGTCTTCCTGGTGTTAAGGCTCAGCCCATG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1268630 178 + 114371477 TGGTCCCAGCACTAACCCTACCCAGGCATCACCATAACAGGTAGGGGGCTTTGGGTCCTCAAGTAAGAAGATCAAGACTTGAGAGGGGTTAGAGCTCCAGCCAGGGCTCCTGCAGGGCAGGGTCCAATAGCCTCCTGACCAGCCTGTGGGTCTTCCTGGTGTTAAGGCTCAGCCCATG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1294469 175 + 1464242 TGGTCCCAGCACTAACCCTACCCAGGCATCACCATAACAGGTAGGGGGCTTTGGGTCCTCAAGT---AAGATCAAGACTTGAGAGGGGTTAGAGATCCAGTCAGCGCTCCTGCAGGGCAGGGTCCAATAGCCTCCTGACCAGCCTGTGGGTCTTCCTGGTGTTAAGGCTCAGCCCATG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1025411 166 + 81552678 TGGTCCCAGCACTAACCCTACCCAGGCATCACCATAACAAGTAGGGGGCTTTGGGTCCTTGAGTAAGAAGATCAAGACTTGAGAGGGGTTAGAGCTCCA------------GCAGGGCAGGGTCCAATAGCCTCCTGACCAGCCTGTGGGTCTTCCTGGTGTTAAGGCTCAGCCCATG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1361007 134 + 108979918 --------------------------------------------GGGGCTTTGGGCCCTTGAGTAAGAAGGTCAGGACTTGAGAGGGCTTAGAGCTCCAGCCAGGACTCCTGTAGGGCAGGGTCCAGTAGCCTCCTGACCAGCCTGTGGGTCTTCCTGGTGTTAAGGCTCAGCCCATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1333183 134 - 111193037 --------------------------------------------GGGGCTTTGGGCCCTTGAGTAAGAAGGTCAGGACTTGAGAGGGCTTAGAGCTCCAGCCAGGACTCCTGTAGGGCAGGGTCCAGTAGCCTCCTGACCAGCCTGTGGGTCTTCCTGGTGTTAAGGCTCAGCCCATG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1361301 134 + 3644372 --------------------------------------------GGGGCTTTGGGCCCTTGAGTAAGAAGGTCAGGACTTGAGAGGGCTTAGAGCTCCAGCCAGGACTCCTGTAGGGCAGGGTCCAGTAGCCTCCTGACCAGCCTGTGGGTCTTCCTGGTGTTAAGGCTCAGCCCATG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1315093 134 - 10304083 --------------------------------------------GGGGCTTTGGGCCCTTGAGTAAGAAGAACAGGACTTGAGAGGGCTTAGAGCTCCAGCCAGGACTCCTGCAGGGCAGGGTCCAGTAGCCTCCTGACCAGCCTGAGGGTCTTCCTGGTGTTGAGGCTCAACCCATG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1385518 134 - 107702431 --------------------------------------------GGGGCTTTGGGCCTTTGAGTAAGAAGGTCAGGACTTGAGAGGGCTTCGAGCTCCAGCCAGGACTCCTGCAGGGCAGGGTCCAGTAGCCTCCTGACCAGCCTGTGGGTCTTCCTGGTGTTGAGGCTCAACCCATG i chlSab2.chr14 C 0 I 193 s manLeu1.NW_012103754v1 864262 134 - 2200435 --------------------------------------------GGGGCTTTGGGCCCTTGAGTAAGAAGAACAGGACTTGAGAGGGCTTAGAGCTCCAGCCAGGACTCCTGTAGGGCAGGGTCCAGTAGCCTCCTGACCAGCCTGTGGGTCTTCCTGGTGTTGAGGCTCGACCCATG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1302449 177 - 13651311 TGGTCCCAGTGCTAACCTTACCCAGGCGCCAACATAGCAGGCA-GGGGCTTTGGGCCCTTGAGTAAGAAGGTCAGGATTTGAGAAGAATTAGAGCTCCAGCCAGGACTCCTGCAGGACAAGGTCCAGTAGCCTCCTGACCAGCCTGTGGGTCTTCCTGGTGTTAAGGCTCAGCCCATG i colAng1.NW_012118821v1 I 430 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C a score=4973223.000000 s hg38.chr2_KI270774v1_alt 30386 885 + 223625 AAAACCAAGGAGCCCTCAGGCAAGTCAGACCCCAGCTGACCCTCACCAGCCCTGCCCAGAGACTAGGACCATCATCAAACCAGGGCAAAATTGGTTTTGAAAGCACTAGTTTACAACCACTGGTTCTTCTTAAAGACCACAACATCATCTCTCACTCCCTGTTCCTCTCTGTCACTCTGAAGTCCCTGTCTCTCTCCATGTCCTGTCAGGCCCCTGTCTGGCTCCCATCACTGTATGTGTGAACCCGTATTTCACTCCTTTCTCTCCTTGGCCAAGGCCATGTGAGTTCAGCATTAAGGGGTCTGAATGGCTGCATCTCGCCCAACCCtgggaagagaaaactagctcagaggagtcagctatgtgaggtttgaagaatttatcagtcccagggagacatgaatttggggctgcagtcctgcactcccacacatgcacccttgcctggggcagctgtttaaaggcattgtgcccctgccctgctgcctcacccatcatcttcatgttcctggaatttgtgatacaaagaacaaagcatagccaatcaatcagtagcttatggtatttaatttagattttgggtaaacaactcagaaactgcctctttttttttttt----aaggtccttttgtaactgcagctttttggagtgtatattcagggcaatttaaatctgtatccccgggttgcaactctcaagcttggctcaaacaaagtctccacatgtattaatttagcctcagattcttcctttaggttgacaTTCCTATGGCAACAGCCACTGGACCCTGCCTGGAGCACAGCATGCCCTTTATATGTTTTATTCTAAATGCAAGTGTGCACGGATAATTtgtaaaccaaaaataaaattctaaagccccccagcca s panTro5.chr2A 1307898 888 + 111504155 AAAACCAAGGAGCCCTCAGGCAAGTCAGACCCCAGCTGACCCTCACCAGCCCTGCCCAGAGACTAGGACCATCATCAAACCAGGGCAAAATTGGTTTTGAAAGCACTGGTTTACAACCGCTGGTTCTTCTTAAAGACCACAACATCATCTCTCACTGCCTGTTCCTCTCTGTCACTCTGAAGTCCCTGTCTCTCTCCATGTCCTGTCAGGCCCCTGTCTGGCTCCCATCACTGTATGTGTGAACCCGTATTTCACTCCTTTCTCTCCTTGGCCAAGGCCATGTGAGTTCAGCTTTAAGGGGTCTGAATGGCTGCATCTCGCCCAACCCtgggaagagaaaactagctcagaggagtcagctatgtgaggtttgaagaatttatcagtcccagggagacatgaatttggggctgcagtcctgcactcccacacatgcacccttgcctggggcagctgtttaaaggcattgtgcccctgccctgctgcctcacccattatcttcatgttcctggaatttgtgatacaaagaacaaagcatagccaatcaatcagtagcttatggtatttaatttagattttgggtaaacaactcagaaactgcctctttttttttttt-tttaaggtccttttataactgcagctttttggagtgtatattcagggcaatttaaatctgtatccccgggttgcaactctcaagcttggctcaaacaaagtctccacatgtattaatttagcctcagattcttcctttaggttgacaTTCCTATGGCAACAGCCACTGGACCCTGCCTGGAGCACAGCATGCCCTTTATATGTTTTATTCTAAATGCAAGTGTGCACGGATAATTtgtaaaccaaaaataaaattctaaagccccccagcca i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1268808 884 + 114371477 AAAACCAAGGAGCCCTCAGGCAAGTCAGACCCCAGCTGACCCTCACCAGCCCTGCCCAGAGACTAGGACCATCATCAAACCAGGGCAAAATTGGTTTTGAAAGCACTGGTTTACAACCGCTGGTTCTTCTTAAAGACCACAACATCATCTCTCACTGCCTGTTCCTCTCTGTCACTCTGAAGTCCCTGTCTCTCTCCATGTCCTGTCAGGCCCCTGTCTGGCTCCCATCACTGTATGTGTGAACCCGTATTTCACTCCTTTCTCTCCTTGGCCAAGGCCATGTGAGTTCAGCTTTAAGGGGTCTGAATGGCTGCATCTCGCCCAACCCtgggaagagaaaactagctcagaggagtcagctatgtgaggtttgaagaatttatcagtcccagggagacatgaatttggggctgcagtcctgcactcccacacatgcacccttgcctggggcagctgtttaaaggcattgtgcccctgccctgctgcctcacccattatcttcatgttcctggaatttgtgatacaaagaacaaagcatagccaatcaatcagtagcttatggtatttaatttagattttgggtaaacaactcagaaactgcctcttttttttttt-----aaggtccttttataactgcagctttttggagtgtatattcagggcaatttaaatctgtatccccgggttgcaactctcaagcttggctcaaacaaagtctccacatgtattaatttagcctcagattcttcctttaggttgacaTTCCTATGGCAACAGCCACTGGACCCTGCCTGGAGCACAGCATGCCCTTTATATGTTTTATTCTAAATGCAAGTGTGCACGGATAATTtgtaaaccaaaaataaaattctaaaaatccccagcca i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1294644 889 + 1464242 AAAACCAAAGAGCCCTCAGGCAAGTCAGACCCCAGCTGACCCTCACCAGCCCTGCCCAGAGACTAGGACCATCATCAAACCAGGGCAAAATTGGTTTTGAAAGCACTGGTTTACAACTGCTGGTTCTTCTTAAAGACCACAACGTCATCTCTCACTGCCTGTTCCTCTCTGTCACTCTGAAGTCCCTGTCTCTCTCCATGTCCTGTCAGGCCCCTGTCTGGCTCCCATCACTGTATGTGTGAACCCGTATTTCACTCCTTTCTCTCCTTGGCCAAGGCCATGTGAGTTCAGCATTAAGGGGTCTGAATGGCTGCATCTCGCCCAACCGtgggaagagaaaactagctcagaggagtcagctatgtgaggtttgaagaatttatcagtcccagggagacatgaatttggggctgcagtcctgcactcccacacatgcacccttgcctggggcagctgtttaaaggcattgtgcccctgccctgctgcctcacccatcatctgcatgttcctggaatttgtgatacaaagaacaaagcatagccaatcaatcagtagcttatggtatttaatttagattttgggtaaacaactcagaagctgcctcttttttttttttttttaaggtccttttataactgcagctttttggagtgtatattcagggcaatttaaatctgtatccccgggttgcaactctcaagcttggctcaagcaaagtctccacatgtattaatttagcctcagattctttctttaggttgacaTTCCTATGGCAACAGCCACTGGACCCTGCCTGGAGCACAGCATGCCCTTTATATGTTTTATTCTAAATGCAAGTGTGCACGGATAATTtgtaaaccaaaaattaaattctaaagccccccagcca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1025577 867 + 81552678 AAAACCAAGGAGCCCTCTGGCAAGTCAGACCCCAGCTGACCCTCACCAGCCCTGCCCAGAGGCTAGGACCATCATCAAACTACGGCAAAATTGGTTTTGAAAGCACTGGTTTACAACCACTGG---TTCTTAAAGACCACAACATCATTTCTCACTGCCTGTTCCTCTCTGTCACTCTGAAGTCCCCATCTCTCTCCTTGTCCTGTCAGGCCTTTGTCTGGCTCCCATCGCTGTATGTGTGAACCTGTATTTCATTCCTTTCTCTCCTTGGCCAAGGCCATGTGAGTTCAGCATTAAGGAGTCTGAATGGCTGCATCTCGCCCATCCCtgggaagagaaaactagctcagaggagtcagctatgtgaggtttgcagaatttatcagtcccagggtgacgtgaatttggggctgcagtcctgcactcccacacatgcagccttgcctggggcagctgtttaaaggcattgtgcccctgccctgctgcctcacccatcatcttcatgttcctggaatttgtgatacaaagaacaaagcatagccaatcaatcagtagcttatggtatttaatttagattttgggtaaacaactcagaaactgcctcttttttttttct---taaggtccatttataactgtagctttttggagtgtatattcaggacaatttaaatctgtgt-cccaggttgcaactctcaaacttggctcaaacaaagtctccacatgtattaatttagcctcagcttcttgctttaggttgacaTTCCTATGGCAACAGCCACTGGACCCTGCCTGGAGCACAGCATGCCCT---------------TAAATGCAAATGTGCATGAATAATTtgtaaaccaaaaataaaattctaaagccccccagcca i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1361141 879 + 108979918 AAAACCAAGGAGCCCTCAGGCAAGCCACACCCCAGCTGACCCTCACCAGCCCTACCCAGAGACTCAGACCATCATCAAACCAGGACAGAATTGGTTTTGAAAGCACTGGTTTATAACCACGGGCTCTTCTTAAAGACCACAACGTCATCTCTCACTGCCTGTTCCTCTCTGTCACTCTGAAGTCCCCGTCCCTCTC--TGTCCTGTCAGGCCCCTGTCTGGCTCCCATCACTGTATGTGTGAACCCGTCTTTCACTCCTTTCGCTCCTTGGCCAAGGCCTTGTGAGTTCAGCATTAAGGGGTCTGAATGGCTGGATCTCACCCATCCCtgggaagagaaaattagctcagaggagtcagctacatgaggtttgcggaatttatcagtcccagggagacgtgagtttggggctgcagtcctgcagtcccacacgtgcatccttgcctggggcagctgtttaaaggcattggg-ccctgccctgctgcctcacctatcgtcttcatgttcctggaatttgtgatacaaagaacaaagcatggccaatcaatcagtagcttatggtatttaatttagattttgggcaaacaactcagaaactgccactttttttta-------aaggtccatttataactgcagctttttggagtgtatattcagggcaatttaaatctgtgtacccaggttgcagctctcaagcttagctcaaagaaagtctccacatgtattaatttagcctcagcttcttgctttaggttgacaTCCCTATGGCAACAGCCACCGGACCCTGCCTGGAGCACAGCATGCCCTTTATATGTTTTATGCTAAACGCAAGGGTGCATGAATAATTtgtaaaccaaaaataaaattctaaggccccccagcca i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1333317 881 - 111193037 AAAACCAAGGAGCCCTCAGGCAAGCCACACCCCAGCTGACCCTCACCAGCCCTACCCAGAGACTCAGACCATCATCAAACCAGGACAGAATTGGTGTTGAAAGCACTGGTTTATAGCCACGGGCTCTTCTTAAAGACCACAACGTCATCTCTCACTGCCTGTTCCTCTCTGTCACTCTGAAGTCCCCGTCTCTCTCTGTGTCCTGTCAGGCCCCTGTCTGGCTCCCATCACTGTATGTGTGAACCCGTCTTTCACTCCTTTCGCTCCTTGGCCAAGGCCTTGTGAGTTCAGCATTAAGGGGTCTGAATGGCTGGATCTCACCCATATCtgggaagagaaaattagctcagaggagtcagctacatgaggtttgcggaatttatcagtcccagggagacgtgagtttggggctgcagtcctgcagtcccacacgtgcatccttgcctggggcagctgtttaaaggcattggg-ccctgccctgctgcctcacctatcgtcttcatgttcctggaatttgtgatacaaagaacaaagcatggccaatcaatcagtagcttatggtatttaatttagattttgggcaaacaactcagaaactgccactttttttta-------aaggtccatttataactgcagctttttggagtgtatattcagggcaatttaaatctgtgtacccaggttgcagctctcaagcttagctcaaagaaagtctccacatgtattaatttagcctcagcttcttgctttaggttgacaTCCCTATGGCAACAGCCACCGGACCCTGCCTGGAGCACAGCATGCCCTTTATATGTTTTATGCTAAATGCAAGGGTGCATGAATAATTtgtaaaccaaaaataaaattctaaggccccccagcca i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1361435 880 + 3644372 AAAACCAAGGAGCCCTCAGGCAAGCCACACCCCAGCTGACCCTCACCAGCCCTACCCAGAGACTCAGACCATCATCAAACCAGGACAGAATTGGTTTTGAAAGCACTGGTTTATAACCACGGGCTCTTCTTAAAGACCACAACATCATCTCTCACTGCCTGTTCCCCTCTGTCACTCTGAAGTCCCCGTCTCTCTCCGTGTCCTGTCAGGCCCCTGTCTGGCTCCCATCACTGTATGTGTGAACCCGTATTTCACTCCTTTCGCTCCTTGGCCAAGGCCTTGTGAGTTCAGCATAAAGGGGTCTGAATGGCTGGATCTCACCCATCCCtgggaagagaaaattagctcagaggagtcagctacatgaggtttgcggaatttatcagtcccagggagacgtgagtttggggctgcagtcctgcagtcccacacgtgcatccttgcctggggcagctgtttaaaggcattggg-ccctgtcctgctgcctcacctatcgtcttcatgttcctggaatttgtgatacaaagaacaaagcatggccaatcaatcagtagcttatggtatttaatttagattttgggcaaacaactcagaaa-tgtcactttttttta-------aaggtccatttataactgcagctttttggagtgtatattcagggcaatttaaatctgtgtacccaggttgcagcactcaagcttagctcaaagaaagtctccacatgtattaatttagcctcagcttcttgctttaggttgacaTCCCTATGGCAACAGCCACCGGACCCTGCCTGGAGCACAGCATGCCCTTTATATGTTTTATGCTAAACGCAAGGGTGCATGAATAATTtgtaaaccaaaaataaaattctaaggccccccagcca i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1315227 880 - 10304083 AAAACCAGGGAGCCCTCAGGCAAGCCACACCCCAGCTGACCGTCACCAGCCCTGCCCGGAGACTCGGACCATCATCAAACCAGGACAGAATTGGTTTTGAAAGCACTGGTTTATAACCACGGGCTCTTCTTAAAGACCACAACATCATCTCTCACTGCCCGTTCCTCTCTGTCACTCTGAAGTCCCCGTCTCTCTCCGTGTCCTGTCAGGCCCCTGTCTGGCTCCCATCAGTGTATGTGTGAACCCGTATTTCACTCCTTTCGCTCCTTGGCCAAGGCCTTGTGAGTTCAGCATTAAGGGGTCTAAATGGCTGGATCTCACCCATCCCtgggaagagaaaattagctcagaggagtcagctacatgaggtttgcggaatttatcagtcccagggagacgtgagtttggggctgcagtcctgcagtcccacacgtgcatccttgcctggagcagctgtttaaaggcattggg-ccctgccctgctgcctcacgcatcgtcttcatgttcctggaatttgtgatacaaagaacaaagcatagccaatcaatcagtagcttatggtatttaatttagattttgggtaaacaactcagaaactgcctc-ttttttta-------aaggtccatttataactgcagctttttggagtgtatattcagggcaatttaaatctgtgtacccaggttgcagctctcaagcttagctcaaagaaagtctccacatgtattaatttagcctcagcttcttgctttaggttgacaTCCCTATGGCAACAGCCACCGGACCCTGCCTGGAGCACAGCATGCCCTTTATATGTTTTATGCTAAACGCAAGGGTGCATGAATAATTtgtaaaccaaaaataaaattctaaggccccccagcca i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1385845 879 - 107702431 AAAACCAGGGAGCCCTCAGGCAAGCCACACCCCAGCTGACCATCACCAGCCCTACCCAGAGACTCGGACCGTCATCAAACCAGGACAGAATTGGTTTTGAAAGCACTGGTTTATAACCACGGGCTCTTCTTAAAGACCACAACATCATCTCTCACTGCCTGTTCCTCTCTGTCACTCTGAAGTCCCCGTCTCTCTCTGTGTCCTGTCAGGCCCCTGTCTGGCTCCCTTCACTGTATGTGTGAACCCATATTTCACTCCTTTCGCTCCTTGGCCAAGGCCTTGTGAGTTCAGCATTAAGGGGTCTGAATGGCTGGATCTCACCCATCCCTGggaagggagaactaactcagaggagtcacctacttgaggtttgtggaatttatcagtcccagggagacgtgagtttggggctgcagtcctgcagtcccacacgtgcatccttgcccggggcagctgtttaaaggcatcagg-ccctgccctgctgcctcacccatcgtcttcatgttcctggaatttgtgatacaaagaacaaagcatagccaatcaatcagtagcttatggtatttaatttagattttgggtaaacaactc--aaactgcctctttttttta-------aaggttcatttataactgcagctttttggagtgtatattcagggcaatttaaatctgtgcaccccggctgcagctctcaagcttagctcaaagaaggtctccacatgtattaatttagcctcagcttcttgctttaggttgacaTCCCTATGGCAACAGCCACCGGACCCTGCCTGGAGCACAGCATGCCCTTTATATGTTTTATTCTAAACGCAAGGGTGCATGAATAATTtgtaaaccaaaaataaaattctaaggccccccagcca i chlSab2.chr14 I 193 I 174 s manLeu1.NW_012103754v1 864396 880 - 2200435 AAAACCAGGGAGCCCTCAGGCAAGCCACACCCCAGCTGACCGTCACCAGCCCTGCCCGGAGACTCGGACCATCATCAAACCAGGACAGAATTGGTTTTGAAAGCACTGGTTTATAACCACGGGCTCTTCTTAAAGACCACAACATCCTCTCTCACTGCCTGTTCCTCTCTGTCACTCTGAAGTCCCCGTCTCTCTCCGTGTCCTGTCAGGCCCCTGTCTGGCTCCCATCACTGTATGTGTGAACCCGTATTTCACTCCTTTTGCTCCTTGGCCAAGGCCTTGTGAGTTCAGCATTAAGGGGTCTGAATGGCTGGATCTCACCCGTCCCtgggaagagagaattagctcagaggagtcagctacatgaggtttgcggaatttatcagtcccagggagacatgagtttggggctgcagtcctgcagtcccacacgtgcatccttgcctggagcagctgtttaaaggcatcggg-ccctgccctgctgcctcacgtatcatcttcatgttcctggaatttgtgatacaaagaacaaagcatagccaatcaatcagtagcttatggtatttaatttagattttgggtaaacaactcagaaactgcctc-ttttttta-------aaggtccatttataactgcagctttttggagtgtatattcagggcaatttaaatctgtgtacccaggttgcagctctcaagcttagctcaaagaaagtctccacatgtattaatttagcctcagcttcttgctttaggttgacaTCCCTACGGCAACAGCCACCGGACCCTGCCTGGAGCACAGCATGCCCTTTATATGTTTTATGCTAAATGCAAGGGTGCATGAATAATTtgtaaaccaaaaataaaattctaaggccccccagcca i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1302626 881 - 13651311 AAAACCAAGGAGCCCTCAGGCAAGCCACACCCCAGCTGACCCTCACCAGCCCTGCCCAGAGACTCGGACCATCATCAAAGCAGGACAGAATTGGTTTTGAAAGCACTGGTTTATAAACATGGGCTCTTCTTAAAGACCACAACATCATCTCTCACTGCCTGTTCCTCTCTGTCACTCTGAAGTCCCCGTGTCTCTCCGTGTCCTGTCAGGCGCCTGTCTGGCTCCCATCACTGTATGTGTGAACCCGTATTTCACTCCTTTCGCTTCTTGGCCAAGGCCTTGTGAGTTCAGCATTAAGGGGTCTGAATGGCTGGATCTCACCCATCCCtgggaagagaaaactagctcagaggagtcagctacgtgaggtttgtggaatttatcagtcccagggagacatgagtttggggctgcaatcctgcagtcccacatgtgcatccttgcctggggtagctgtttaaaggcatcggg-ccctgccctgctgccttacccatcgtcttcatgttcctggaatttgtgatacaaagaagaaagcattgccaatcaatcagtagcttatggtatttaatttagattttgggtaaacaactcagaaattgcctctttttttta-------aaggtccatttataactgcagctttttggagtgtatattcagggcaatttaaatctgggtacccaggttgcagctctcaagcttagctcaaagaaagtctccacatgtattaatttagtctcagcttcttgctttaggttgacaTCCCTATGGCAACAGCCACTGGACCCTGCCTGGAGCACAGCATGCGCTTTATATGTTTTATTCTACATGCAAGGGTGCATGAATAATTtgtaaaccaaaaataaaattctaaggccccccagcca i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C a score=1215645.000000 s hg38.chr2_KI270774v1_alt 31271 220 + 223625 tctgaatggacttcctcctcagccagggatttcttaaaatttaacctgaaagactggttcaggccatgataggaaataagtgttgggtgtgcctcatgatgcctctctggcattaacatc-------aacatat--------------------tctttaagtctgaaaacaaacattttacaacctattctc----taaagcctactaccttaaggcttcctctgcaaataagaactgtggtctccacaa s panTro5.chr2A 1308786 247 + 111504155 tctgaatggacttcctcctcagccagggatttcttaaaatttaacctgaaagactggttcaggccatggtaggaaataagtgttgggtgtgcctcatgacgcctctctggcattaacatctggcattaacatctggccttaaagaaacattgtttctttaagtctgaaaacaaacattttgcaacctattctc----taaagcctactaccttaaggcttcctctgcaaataagaactgtggtctccacaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1269692 247 + 114371477 tctgaatggacttcctcctcagccagggatttcttaaaatttaacctgaaagactggttcaggccatggtaggaaataagtgttgggtgtgcctcatgacacctctctggcattaacatctggcattaacatctggccttaaagaaacattgtttctttaagtctgaaaacaaacattttgcaacctattctc----taaagcctactaccttaaggcttcctctgcaaataagaactgtggtctccacaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1295533 220 + 1464242 tctgaatggacttcctcctcagccagggatttcttaaaatttaacctgaaagactggttcaggccatgataggaaataagtgttgggtgtgcctcatgatgcctcgctggcattaacatc-------aacatat--------------------tctttaagtctgaaaacaaacattttacagcctattctc----taaagcctactaccttaaggcttcccttgcaaataagaactgtggtctccacaa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1026444 220 + 81552678 tctgaatggacttcctcctcagccagggatttcttaaaattcaacctgaaagactggttcaggccatgataggaaacaagtgttgggtgtgcctcatgatgcctctctggcattaacgtc-------aacatat--------------------tctttaagtctgaaaacaaacattttacaacctattctc----taaagcctactaccttaaggcttcctctgcaaataagaactgtggtctccaTGA i nomLeu3.chr19 C 0 M 1217 s rheMac8.chr13 1362020 224 + 108979918 tctgaatggacttccttctcagccagggatttcttaaaatttaacctgaaagactggttcaggccatgacgggaaataacggttgggtgtgcctcatgatgcctctccggcatgaatatc-------aacatat--------------------tctttaagtctgaaaagaaatattttacaacctattctttctgtaaagcctactaccttaaagcttcctctgcaaataagaactgtggtctccacaa i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1334198 224 - 111193037 tctgaatggacttccttctcagccagggatttcttaaaatttaacctgaaagactggttcaggccatgacgggaaataacggttgggtgtgcctcatgatgcctctccggcatgaatatc-------aacatat--------------------tctttaagtcttaaaagaaatattttacaacctattctttctgtaaagcctactaccttaaagcttcctctgcaaataagaactgtggtctccacaa i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1362315 224 + 3644372 tctgaatggacttccttctcagccagggatttcttaaaatttaacctgaaagactggttcaggccatgatgggaaataacggttgggtgtgcctcatgatgcctctccggcatgaatatc-------aacatat--------------------tctttcagtctgaaaagaaatattttacaacctattctttctgtaaagcctactaccttaaagcttcctctgcaaataagaactgtggtctccacaa i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1316107 224 - 10304083 tctgaatggactttcttctcagccagggatttcttaaaatttaacctgaaagactggttcaggctatgacgggaaataacggttgggtgtgcctcatgatgcctctccagcattaatatc-------aacatat--------------------tctttaagtctgaaaagaaatattttacaacctattctttctgtaaagcctactaccttaaagcttcctctgcaaataagaactgtggtctccacaa i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1386898 223 - 107702431 tctgaatggacttccttctcggccagggatttcttaaaatttaacctgaaagactggttcaggccatgacgggaaataacggttgggtgtgcctcatgatgcctctccggcattaatatc-------aacatat--------------------tctttaagtctg-aaagaaatattttacaacctattctttctgtaaagcctactaccttaaagcttcctctgcaaataagaactgtggtctccacaa i chlSab2.chr14 I 174 C 0 s manLeu1.NW_012103754v1 865276 224 - 2200435 tctgaatggacttccttctcagccagggatttcttaaaatttaacctgaaagactggttcaggccatgacgggaaataacggttgggtgtgcctcatgatgcctctccagcattaatatc-------aacatat--------------------tctttaagtctgaaaagaaatattttacaacctattctttctgtaaagcctactaccttaaagcttcctctgcaaataagaactgtggtctccacaa i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1303507 224 - 13651311 tctgactggacttccttctcagccagggatttcttaaaatttaacctgaaagaccggttcaggccaggacggggaataactgttgggtgtgcctcatgatgcctctccggcattaacatc-------aacatat--------------------tctttaagtctgaaaagaaatattttacaacctattctctctctaaagcctactaccttaaggcttcctctgcagataagaactgtggtctccacaa i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C a score=1537399.000000 s hg38.chr2_KI270774v1_alt 31491 330 + 223625 tcctttatcttaacccagacattcctttctattgatcccaggtctttatatacactcaaccaattgtcaacaagaaaatttttcagtctacttctaatctggaagtccttgcttgtagttgtcccacctttctgaaccaaaccaatgtatttcttaaatgtatttgattgaagtctgctgtcttcctaaagtgtataaaatcaagctgtgccctaaccaccttgggaacatgtttctaggacctcccgagggcggtgtcacaggccatggccattcatatttgactgagaataaatttcttcaaatattttacagagtttgactcttttc s panTro5.chr2A 1309033 330 + 111504155 tcctttatcttaacccagacattcctttctattgatcccaggtctttatatacacccaaccaattgtcaacaagaaaatttttcagtctacttctaatctggaagtccttgcttgtagttgtcccacctttctgaaccaaaccaatgtatttcttaaatgtatttgactgaagtctcctgtcttcctaaagtgtataaaatcaagctgtgccctaaccaccttgggaacatgtttctaggacctcccgagggcggtgtcacaggccacagccattcctatttgactgagaataaatttcttcaaatattttacagagtttgactcttttc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1269939 330 + 114371477 tcctttatcttaacccagacattcctttctattgatcccaggtctttatatacacccaaccaattgtcaacaagaaaatttttcagtctacttctaatctggaagtccttgcttgtagttgtcccacctttctgaaccaaaccaatgtatttcttaaatgtatttgactgaagtctcctgtcttcctaaagtgtataaaatcaagctgtgccctaaccaccttgggaacatgtttctaggacctcccgagggcggtgtcacaggccacagccattcctatttgactgagaataaatttcttcaaatattttacagagtttgactcttttc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1295753 330 + 1464242 tcctttatcttaacccagacattcctttctattgatcccaggtctttatatacactcaaccaattgtcaacaagaaaatttttcagtctacttctcatctggaagtccttgcttgtagttgtcccacctttctgaaccaaaccaatgtatttcttaaatgtatttgattgaagtctgctgtcttcctaaagtgtataaaatcaagctgtgccctaaccaccttgggaacatgtttctaggacctcctgagggcagtgtcacaggccatggccattcatatttgactgagaataaatttcttcaaatattttacagagtttgactcgtttc i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1362244 326 + 108979918 tcctttatcttaacccagacattcctttccattgatcccaggtctttacatacactcaatcaattgtcaatcagaaaatttttcaatctacctctaagctggaagtccctacttgtagttgtcccacctttctgaaccaaaacaatgtatttcttaaatgtatttgattgaagtctcatgtcttcctaaaatgtataaaatcaagctgtgccctaaccaccttaggaacatgttcccaggacctcctgagggtgatgtcacaggccgtggccactcatatt----tgagaataaatctcttcaaatattttacagagtttgactcttttc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1334422 326 - 111193037 tcctttatcttaacccagacattcctttccattgatcccaggtctttacatacactcaatcaattgtcaatcagaaaatttttcaatctacctctaagctggaagtctctacttgtagttgtcccacctttctgaaccaaaacaatgtatttcttaaatgtatttgattgaagtctcatgtcttcctaaaatgtataaaatcaagctgtgccctaaccaccttgggaacatgttcccaggacctcctgagggtgatgtcacaggccatggccactcatatt----tgagaataaatctcttcaaatattttacagagtttgactcttttc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1362539 326 + 3644372 tcctttatcttaacccagacattcctttccattgatctcaggtctttacatacactcaatcaattgtcaatcagaaaatttttcaatctacctctaagctggaagtccctacttgtagttgtcccacctttctgaaccaaaacaatgtatttcttaaatgtatttgattgaagtctcatgtcttcctaaaatgtataaaatcaacctgtgccctaaccaccttgggaacatgttcccaggacctcctgagggtgatgtcacaggccgtggccactcatatt----tgagaataaatctcttcaaatattttacagagtttgactcttttc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1316331 326 - 10304083 tcctttatcttaacccagacattcctttccattgatcccaggtctttacatacactcaatcaattgtcaatcagaaaatttttcaatctacctctaagctggaagttcctacttgtagttgtcccacctttctgaaccaaaacaatgtatttcttaaatgtatttgattgaagtctcatgtcttcctaaaatgtataaaatcaagctgtgccctaaccaccttgggaacatgttcccaggacctcctgagggtggtgtcacaggccatggccactcatatt----tgagaataaatctcttcaaatattttacagagtttgactctttcc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1387121 326 - 107702431 tcctttatcttaacccagacattcctttctattgatcccaggtctttacatacactcaatcaattgtcaatcagaaaatttttcaatctacctctaagctggaagttcctacttgtagttgtcccacctttctgaaccaaaacaatgtatttcttaaatgtatttgattgaagtctcatgttttcctaaaatgtttaaaatcaagctgtgccctaaccaccttgggaacatgttcccaggacctcctgagggcagtgtcacaggccatggccactcatatt----tgagaataaatctctttaaatattttacagagtttgactcttttc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 865500 325 - 2200435 tcttttatcttaacccagacattcctttctattgatcccaggtctttacatacactcaatcaattgtcagtcagaaaatttttcaatctacctctaagctggaagttcctacttgtagttgtcccacctttctgaaccaaaacaatgtatttcttaaatgtatttgattgaagtctcatttcttcctaaaatgtataaaatcaagctgtgccctaaccaccttgggaacatg-tcccaggacctcctgagggcggtgtcacaggccgtggccactcatatt----tgagaataaatctcttcaaatattttacagagtttgactcttttc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1303731 326 - 13651311 tcctttatcttaacccagacattcctttctattgatcccaggtctttacatacactcaatcaattgtcaatcagaaaatttttcaatctacctctaagcaggaagtccctacttgtagttgtcccacctttctgaaccaaaacaatgtatttcttaaatgtatttgattgaagtctcatgtcttcctaaaatgtataaagtcaagctgtgccctaaccacattgggcacatgttcccaggacctcctgggggtggtgtcataggccgtggccgctcatatt----tgagaataaatctctttaaatattttacagagtttgactcttttc i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1575128 3734 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e nomLeu3.chr19 1026664 1217 + 81552678 M a score=130284.000000 s hg38.chr2_KI270774v1_alt 31821 25 + 223625 attaacaAATTGTTGTACAGTTGAA s panTro5.chr2A 1309363 25 + 111504155 attaacaAATTGTTGTACAGTTGAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1270269 25 + 114371477 attaacaAATTGTTGTACAGTTGAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1296083 25 + 1464242 attaacaAATTGTTGTACAGTTGAA i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1362570 25 + 108979918 attaacaAATTGTTGTGCAGTTGAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1334748 25 - 111193037 attaacaAATTGTTGTGCAGTTGAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1362865 25 + 3644372 attaacaAATTGTTGTGCAGTTGAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1316657 25 - 10304083 attaacaAATTGTTGTGCAGTTGAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1387447 25 - 107702431 attaacaAATTGTTGTGCAGTTGAA i chlSab2.chr14 C 0 I 144 s manLeu1.NW_012103754v1 865825 25 - 2200435 attaacaAATTGTTGTGCAGTGGAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1304057 25 - 13651311 attaacaAATTGTTGTGCAGCTGAA i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1578862 24 + 4416731 ATGAATGAATT-TTTTATAGCTGAA i dasNov3.JH576208 I 3734 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e calJac3.chr14 1310251 0 - 108792865 C e nomLeu3.chr19 1026664 1217 + 81552678 M a score=430178.000000 s hg38.chr2_KI270774v1_alt 31846 83 + 223625 CAGAAATCAGCTTAAACTAATACTTGTGCTTCTAGCTTTCTTACCTGGTGTATT-----TCTAATGAATTATT-TTCTTTAAAAATAAT s panTro5.chr2A 1309388 83 + 111504155 CAGAAATCAGCTTAAACTAATACTTGTGCTTCTAGCTTTCTTACTTGGCGTATT-----TCTAATGAATTATT-TTCTTTAAAAATAAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1270294 83 + 114371477 CAGAAATCAGCTTAAACTAATACTTGTGCTTCTAGCTTTCTTACTTGGCGTATT-----TCTAATGAATTATT-TTCTTTAAAAATAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1296108 83 + 1464242 CAGAAATCAGCTTAAACCAATACTTGTGCTTCTAGCTTTCTTACTTGGTGTATT-----TCTAATGAATTATT-TTCTTTAAAAATAAT i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1362595 83 + 108979918 CAGAAATCAGCTTAAACTAATACTTGTGCATCTAGCTTTCTTACTTGGTGCATT-----TCTAACAAATTATT-TTCTTTAAAAATAAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1334773 83 - 111193037 CAGAAATCAGCTTAAACTAATACTTGTGCATCTAGCTTTCTTACTTGGTGCATT-----TCTAACAAATTATT-TTCTTTAAAAATAAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1362890 83 + 3644372 CAGAAATCAGCTTAAACTAATACTTGTGCATCTAGCTTTCTTACTTGGTGCATT-----TCTAACAAATTATT-TTCTTTAAAAATAAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1316682 83 - 10304083 CAGAAATCAGCTTAAACTAATACTTGTGCATCTAGCTTTCTTACTTGGTGCATT-----TCTAACAAATTATT-TTCTTTAAAAATAAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1387616 83 - 107702431 CAGAAATCAGCTTAAACTAATACTTGTGCATCTAGCTTTCTTACTTGGTGCATT-----TCTAACAAATTATT-TTCTTTAAAAATAAT i chlSab2.chr14 I 144 C 0 s manLeu1.NW_012103754v1 865850 83 - 2200435 CAGAAATCAGCTTAAACTAATACTTGTGCATCTAGCTTTCTTACTTGGTGCATT-----TCTAACAAATTATT-TTCTTTAAAAATAAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1304082 88 - 13651311 CAGAAATCAGCTTAAACTAATACTTGCGCATCTAGCTTTCTTACTTGGTGCATTAAAGAAAAAACAAATTATT-TTCTTTAAAAGTAAT i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1578886 83 + 4416731 CAGAAATTGACCAAAACTGGTATTTGTACTTTAGGCTTTTTTGCTT-ATACATT-----TCTAGTGAAACATTATTCTTTAAAaataat i dasNov3.JH576208 C 0 I 798 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e calJac3.chr14 1310251 0 - 108792865 C e nomLeu3.chr19 1026664 1217 + 81552678 M a score=2298084.000000 s hg38.chr2_KI270774v1_alt 31929 504 + 223625 CTtgttatagcccagtgggttattcttgactgatgcacaaaacagccaatacaatgagacagcatgtgttacagcagagaaagagtttaattattgcaaggcaactgagcaggaggagacaggaggtacttttcaaatcttccttatgaagaattcagaggctaggattttaaaggatagtcttccggcaaggggttagacaatgggaactgctgattggctgggttggggatgaaaccacaggggtgatagggatgtccaaactgtctttgtgctctgaatcgtttcctggttgggggggtcactggtccaagtggcatcagttgttctactaaaatataaggtctgaaaaac-tatctcaaacaccagtcttagtctttacaatagtgatgttatctatggaggcaattagggaagttacaagtcttatgagcaccagctacatgactcctgagcagtaagcaagttaagaaacaatgactagttatgatttacctatgcaga s panTro5.chr2A 1309471 503 + 111504155 CTTGCTatagcccaatgggttcttcttgcctgatgcacaaaacagccaatacaatgagacagcatgtgttatagcagagaaagagtttaattattgcaaggcaactgagcaggaggagacaggaggtacttttcaaatcttccttatgaagaattcagaggctaggattttaaaggatagtcttccagcaaggggttagacaatgggaactgctgattggctgggttggggatgaaaccacaggggtgatagggatgtccaaactgtctttgtgcactgaatcgtttcctgactggggg--tcactggtccaagtggcatcaatttttctactaaaatataaggtctgaaaaaaatatctcaaacaccagtcttagtctttacaacagtgatgttatctgtggaggcaattagggaagttacaagtcttatgagcaccagctacatgactcctgagcagtaagcaagttaagaaacaatgactagttatgatttacctatgcaga i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1270377 503 + 114371477 CTtgttatagcccaatgggttcttcttgcctgatgcacaaaacagccaatacaatgagacagcatgtgttatagcagagaaagagtttaattattgcaaggcaactgagcaggaggagacaggaggtacttttcaaatcttccttatgaagaattcagaggctaggattttaaaggatagtcttccagcaaggggttagacaatgggaactgctgattggctgggttggggatgaaaccacaggggtgatagggatgtccaaactgtctttgtgcactgaatcgtttcctgactggggg--tcactggtccaagtggcatcaatttttctactaaaacataaggtctgaaaaaaatatctcaaacaccagtcttagtctttacaatagtgatgttatctatggaggcaattagggaagttacaagtcttatgagcaccagctacatgactcctgagcagtaagcaagttaagaaacaatgactagttatgatttacctatgcaga i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1296191 501 + 1464242 CTtgttatagcccaatgggttcttcttgcctgatgcacaaaacagccaatacaatgagacagcatgtgttacagcagagaaagagtttaattattgcaaggcaactgagcaggaggagacaggaggtacttttcaaatcttccttatgaagaattcagaggctaggattttaaaggatagtcttccggcaaggggttagacaatgggaactgctgattggctgggttggggatgaaaccacaggggtgatagggatgtccaaactgtctttgtgcactgaatcgtttccttgttggggg--tcactggtccaagtggcatcagttgttctactaaaatataaggtctgaaaaaa-tatctcaaacaccagtcttagtctttacaatagtgatgttatctatggaggcaattagggaagttacaagtcttatgagcaccagctacatgactcctgagcagtaagc-agttaagaaacaatgactagttatgatttacctatgcaga i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1362678 491 + 108979918 CTtgttacagcctaatgggttcttcttgcctgatgcacaaaaaagccaatacaatgagacagcacgtgttacagcagagaaagagtttaattattgcaaggcagctgagcgagaggagacaggaggtacttctcaaatcttccttatgaagaattcaaaggctaggattttataggatagtcttccagcaaagggctagacaatgggaaacgctgactggctgggttggggatgaaatgac----------gggatgtccaaactgtctttgtgcactgcatcgcttcctggttggcg---tcactggtctaggcagcatcagttgttccactaaaatataaggtctgaaaaaa-tatctcagacaccagtcttagtctttacaatagtgatgttatctacggaggcaattagggaagttacaagtcttgtgaacaccagctacatgacacttaagcagtaaacaagttaagaaacaataactagttatgattgacctatgcaga i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1334856 491 - 111193037 CTtgttacagcctaatgggttcttcttgcctgatgcgcaaaaaagccaatacaatgagacagcacgtgttacagcagagaaagagtttaattattgcaaggcagctgagcgagaggagacaggaggtacttctcaaatcttccttatgaagaattcaaaggctaggattttataggatagtcttccagcaaagggctagacaatgggaaacgctgactggctgggttggggatgaaatgac----------gggatgtccaaactgtctttgtgcactgcatcgcttcctggttggcg---tcactggtctaggcagcatcagttgttccactaaaatataaggtctgaaaaaa-tatctcagacaccagtcttagtctttacaatagtgatgttatctatggaggcaattagggaagttacaagtcttgtgaacaccagctacatgacacttaagcagtaaacaagttaagaaacaataactagttatgattgacctatgcaga i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1362973 491 + 3644372 CTtgttacagcctaatgggttcttcttgcctgatgcacaaaaaagccaatacaatgagacagcacgtgttacagcagagaaagagtttaattattgcaaggcagctgagcgagaggagacaggaggtacttctcaaatcttccttatgaagaattcaaaggctaggattttataggatagtcttccagcaaagggctagacaatgggaaacgctgactggctgggttgggggtgaaatgac----------gggatgtccaaactgtctttgtgcactgcatcgcttcctggttggcg---tcactggtctaggcagcatcagttgttccactaaaatataaggtctgaaaaaa-tatctcagacaccagtcttagtctttacaatagtgatgttatctacggaggcaattagggaagttacaagtcttgtgaacaccagctacatgacacttaagcagtaaacaagttaagaaacaataactagttatgattgacctatgcaga i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1316765 491 - 10304083 CTtgttacagcccaatgggttcttcttgcctgatgcacaaaaaagccaatacaacgagacagcacgtgttacagcagagaaagagtttaattattgcaaggcagctgagcgagaggagacaggaggtacttctcaaatcttccttacgaagaattcaaaggctaggattttataggatagtcttccagcaaagggctagacaatgggaaatgctgactggctgggttggggatgaaatgac----------gggatgtccaaactgtctttgtgcactgcatcgcttcctggttggcg---tcactggtctaggcggcatcagttgttccactaaaatataaggtctgaaaaaa-tatctcagacaccagtcttagtttttacaatagtgatgttatctacggaggcaattagggaagttacaagtcttgtgaacaccagctacatgacacttaagcagtaaacaagttaagaaacaataactagttatgattgacctatgcaga i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1387699 490 - 107702431 CTtgttacagcccaatgggttcttcttgcctgatgcacaaaaaagccaatacaatgagacagcacatgttacagcagagaaagagtttaattattgcaaggcaactgagcgagaggagacaggaggtacttcccaaatcttccttacgaagaattcaaaggctagga-tttataggatagtcttccagcaaggggctagacaacgggaaatgccgactggctgggttggggatgaaatgac----------gggatgtgcaaactgtctttgtgcgctgcatcgcttcccggttggcg---tcactggtctaggcggcatcagttgttccactaaaatataaggtctgaaaaaa-tgtctcagacaccagtcttagtctttacaatagtgatgttatctatggaggcaattggggaagttacaagtcttgtgaACACCAGCTACATGACACCTGAGCAGTAAGCAAGTTAAGAAACAATGACTAGTTACGATTGACCTATGCAGA i chlSab2.chr14 C 0 I 429 s manLeu1.NW_012103754v1 865933 490 - 2200435 CTtgttacagcccaatgggttcttcttgcctgatgcacaaaaaagccaatacaatgagacagcacgtgttacagcagagaaagagtttaattattgcaaggcaactgagcgagaggagacaggaggtacttctcaaatcttccttacgaagaattcaaaggctagga-tttataggatagtcttccagcaaggggctagacaatgggaaatgctgacttgctgggttggggatgaaatgac----------gggatgtccaaactgtctttgtgcactgcatcgcttcctggttggcg---tcactggtctaggcggcatcagttgttccactaaaatataaggtctgaaaaaa-tatctgagacaccagtcttagtttttacaatagtgatgttatctacggaggcaattagggaagttacaagtcttgtgaacaccagctacatgacacttaagcagtaaacaagttaagaaacaatgactagttatgattgacctatgcaga i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1304170 491 - 13651311 CTtgttacagcccagtggattcttcttgcctgatgcacaaaaaagccaatacaatgagacagcatgtgttacagcagagaaagagtttaattattgcaaggcaactgagcgagaggagacaggaggtacttctcaaatcttccttacaaagaattcaaaggctaggattttataggatagtcttccagcaaggggctagacaacgggaaatgctgactggctgggttggggatgaaatgac----------gggatgtccaaactgtctttgtgcactgcatcgtttcctggttggcg---tcactgatctaggcagcaacagttgttccactaaaatataaggtctgaaaaaa-tatctcagacaccagtcttagtctttacaatagtgatgttatctatggaggcaattagggaagttacaagtcttgtgaacaccagctacatgacacctgagcagtaagcaagttaagaaacaatgactagttatgactgacctatgcaga i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1578969 798 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e nomLeu3.chr19 1026664 1217 + 81552678 M a score=243078.000000 s hg38.chr2_KI270774v1_alt 32433 65 + 223625 gctcttagcagaattcaggttcctaccacaatgctaaccttgtggcccttcattaattatacaaa s panTro5.chr2A 1309974 65 + 111504155 gctcgtagcagaattcaggttcctaccataatgctaaccttgtggcccttcattaattatacaaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1270880 65 + 114371477 gctcgtagcagaattcaggttcctaccataatgctaaccttgtggcccttcattaattatacaaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1296692 65 + 1464242 gctcttagcagaattcaggttcctaccataatgctaaccttgtggcccttcattagttatacaca i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1363169 65 + 108979918 gcttttagcagaattcaggttcctgccataattctaaacttgtggcccttcattagctatacaaa i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1335347 65 - 111193037 gcttttagcagaattcaggttcctgccataattctaaacttgtggcccttcattagctatacaaa i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1363464 65 + 3644372 gcttttagcagaattcaggttcctgccataattctaaacttgtggcccttcattagctatacaaa i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1317256 65 - 10304083 gcttttagcagaattcaggttcctgccataattctaaacttgtgacccttgattagctatacaaa i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 866423 65 - 2200435 gcttttagcagaattcaggttcctgccataattctaaacttgtgacccttcattagctatacaaa i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1304661 65 - 13651311 gctttcagcagaattcaggttcctgccataattctaaacttgtggcccttcattagctatacaaa i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1578969 798 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e chlSab2.chr14 1388189 429 - 107702431 I e nomLeu3.chr19 1026664 1217 + 81552678 M a score=97704.000000 s hg38.chr2_KI270774v1_alt 32498 20 + 223625 ggcagttttggtccttgaac s panTro5.chr2A 1310039 20 + 111504155 ggcagtttgggtcctcaaac i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1270945 20 + 114371477 gacagttttggtcctcaaac i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1296757 20 + 1464242 ggcagttttggtcctcaaac i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1027881 20 + 81552678 ggcagttttggtcctcgaac i nomLeu3.chr19 M 1217 C 0 s rheMac8.chr13 1363234 20 + 108979918 ggcagttttggtcctcgaac i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1335412 20 - 111193037 ggcagttttggtcctcgaac i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1363529 20 + 3644372 ggcagttttggtcctcgaac i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1317321 20 - 10304083 ggcagttttggtcctcgaac i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 866488 20 - 2200435 ggcagttttggtcctcgaac i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1304726 20 - 13651311 ggcagttttggtcctcgaac i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1578969 798 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C e chlSab2.chr14 1388189 429 - 107702431 I a score=2117113.000000 s hg38.chr2_KI270774v1_alt 32518 384 + 223625 aagaacaggggtagctttgggaagggactgttatcatccttgctttaaggttaaactagaagctaaattcctgtgttctgagctgggcctgtgcccaggcatgaacaaggccatcagcttgtgaggttagaagcaaggtggggtcac-tt--atgctacttttctcaccttcataagtttcacaaaggcagtttcaGTCTCTCTTGTA--------------------------------------------------------------------------TGTTAAGTGCCATCCAGAtgccagggactgtgctgggtactgtttatgcatgattgcattaatcaccaccaagccccaggac-----------------------------------------------------------acaaacagtgtaattaccttcagtttgttcatcgtgaacctggggatgagtgtaagtatcttgcttagggtaaaagaattattaaacatagaatcaa s panTro5.chr2A 1310059 384 + 111504155 aagaacaggggtagctttgggaaggggctgttgtcatccttgctttaaggttaaactagaagctaaattcctgtgttctgagctgggcctgtgcccaggcatgaacaaggccatcagcttgtgaggttagaagcaaggtggggtcac-tt--atgctacttttctcaccttcgtaagtttcacaaaggcagtttcaGTCTCTCTTGTA--------------------------------------------------------------------------tgttaagtgccatccagatgccaggcactgtcctgggtactgtttatgcatgattgcattaatcaccaccaagccccaggac-----------------------------------------------------------acaagcagtgtaattatcctcagtttgttcatcgtgaacctggggatgagtgtaagtatcttgcttagggtaaaagaattattaaacatagaatcaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1270965 377 + 114371477 aagaacaggggtagctttgggaaggggctgttgtcatccttgctttaaggttaaactagaagctaaattcctgtgttctgagctgggcctgtgcccaggcatgaacaaggccatcagcttgtgaggttagaagcaaggtggggtcac-tt--atgctacttttctcaccttcgtaagtttcacaaaggcagtttcaGTCTCTCTTGTA--------------------------------------------------------------------------tgttaagtgccatccagatgccaggcactgtcctgggtactgtttatgcatgattgcattaatcaccaccaagccccaggac-----------------------------------------------------------acaagcag-------atcctcagtttgttcatcgtgaacctggggatgagtgtaagtatcttgcttagggtaaaagaattattaaacatagaatcaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1296777 384 + 1464242 aagaacaggggtagctttgggaaggggctgttgtcatccttgctttaaggttaaactagaagctaaattcctgtgttctgtgctgggcctgtgcccaggcatgaacaaggccatcagcttgtgaggttagaagcaaggtggggtcac-tt--atgctacttttctcaccttcataagtttcacaaaggcagtttcaGTCTCTCTTGTA--------------------------------------------------------------------------tgttaagtgccatccagatgccagggactatgctgggtactgtttatgcatgattgcattaatcaccagcaagccccaggac-----------------------------------------------------------acaaacagtgtaattatcctcagtttgttcatcgtgaacctggggatgagtgtaagtatcttgcttagggtaaaagaattattaaacatagaatcaa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1027901 382 + 81552678 aagaac--gggtagctttgggaaggggctgttatcatccttgctttaaggttaatctagaagctaaattcctgtgttctgagctgggcctgtgcccaggcatgaacaaggccatcagcttgtgaggttagaagcaaggtggggtcac-tt--atgctacttttctcaccttcataagtttcacaaaggcagtttcaATCTCTCTTGTA--------------------------------------------------------------------------tgttaagtgccatccagatgccagggactgtgctgggtactgtttatgcatgattgcattaatcagtaccaagccctgggac-----------------------------------------------------------acaaacagcgtaattatcctcggtttgttcatcgtgaacctggggatgagtgtaagtatcttgcttagggtaaaataattattaaacatagaatcaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1363254 379 + 108979918 aagaac-ggggtagctttgggaaggggctgttatcatccttgctttaaggttaaactagaagctaaattcctgtgttctgaactgggcctgtgtccagccatgaacaaggccatcagcttgtgaggttagaagcaaggtggggtcac-tt--acgctacttttctcgccttcataagtttcacaaaggcagtttcaATCTCTCTTGTA--------------------------------------------------------------------------tattaagtgccatccagatgccagggactgtactgggtagtgtttatgcatgattgcattaatcaccaccaagccccgggac---------------------------------------------------------------acagtgtaattatcctcggtttgttcatcgtgaacctggggatgagtgtaaatatcttgcttagggtaaaagaattattaaacatagaatcaa i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1335432 379 - 111193037 aagaac-ggggtagctttgggaaggggctgttatcatccttgctttaaggttaaactagaagctaaattcctgtgttctgaactgggcctgtgtccagccatgaacaaggccatcagcttgtgaggttagaagcaaggtggggtcac-tt--acgctacttttctcgccttcataagtttcacaaaggcagtttcaATCTCTCTTGTA--------------------------------------------------------------------------tattaagtgccatccagatgccagggactgtactgggtagtgtttatgcatgattgcattaatcaccaccaagccccgggac---------------------------------------------------------------acagtgtaattatcctcggtttgttcatcgtgaacctggggatgagtgtaaatatcttgcttagggtaaaagaattattaaacatagaatcaa i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1363549 380 + 3644372 aagaac-ggggtagctttgggaaggggctgttatcatccttgctttaaggttaaactagaagctaaattcctgtgttctgaactgggcctgtgtccagccatgaacaaggccatcagcttgtgaggttagaagcaaggtggggtcacttt--acgctacttttctcgccttcataagtttcacaaaggcagtttcaATCTCTCTTGTA--------------------------------------------------------------------------tattaagtgccatccagatgccagggactgtactgggtagtgtttatgcatgattgcattaatcaccaccaagccccgggac---------------------------------------------------------------acagtgtaattatcctcggtttgttcatcgtgaacctggggatgagtgtaaatatcttgcttagggtaaaagaattattaaacatagaatcaa i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1317341 381 - 10304083 aagaac-ggggtagctttgggaaggggctgttatcatccttgttttaaggttaaactagaagctaaattcctgtgttctgaactgggcctgtgtccagtcataaacaaggccatcagcttgtgaggttagaagcaaggtggggtcac-ttagacgctacttttctcgccttcataagtttcacaaaggcagtttcaATCTCTCTTGTA--------------------------------------------------------------------------tattaagtgccatccagatgccagggactgtactgggtagtgtttatgcatgactgcattaatcaccaccaagccccaggac---------------------------------------------------------------acagtgtaattatcctcggtttgttcatcgtgaacctggggatgagtgtaaatatcttgcttagggtaaaagaatttgtaaacatagaatcaa i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1388618 443 - 107702431 aagaacaggggtagctttgggaaggggctgttatcatccttgctttaaggtttaactagacgctaaattcctgtgttctgaactgggcccgtgttcaggcatgaacaaggctatcagcttgtgaggttagaagcaaggtggggtcac-tt--acgctacttttctcgccttcgtaagtttcacaaaggcagtttcaATCTCTCTTGTA--------------------------------------------------------------------------TATCAAGTGCCATCCAGATGCCAGGGACTGTCCTGGGTAGGGTTTATGCATGATTGCATTAATCACCACCAAGCTCCGGGGCACAAACAGTGTAATTATCCTCGGTTTGTTCATCGTGAACCTGNNNNNNNNNNCCGGGGCACAAACAGTGTAATTATCCTCGGTTTGTTCATCGTGAACCTGGGGATGAGTGTAAATATTTTGCTTAGGGTAAAATAATTATTAAACATAGAATCAA i chlSab2.chr14 I 429 C 0 s manLeu1.NW_012103754v1 866508 381 - 2200435 aagaac-ggggtagctttgggaaggggctgttatcatccttgttttaaggttaaactagaagctaaattcctgtgttctgaactgggcctgtgtccagtcataaacaaggccatcagcttgtgaggttagaagcaaggtggggtcac-ttagacgctacttttctcgccttcataagtttcacaaaggcagtttcaATCTCTCTTGTA--------------------------------------------------------------------------tattaagtgccatccagatgccagggactgtactgggtagtgtttatgcatgattgcattaatgaccaccaagccccgggac---------------------------------------------------------------acagtgtaattatcctcggtttgttcattgtgaacctggggatgagtgtaaatatcttgcttagggtaaaagaattattaaacatagaatcaa i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1304746 455 - 13651311 aagaacaggggtagctttgggaaggggctgttatcatccttgctttaaggtttaactagaagataaattcctgtgttctgaactgggcctgtgtccagccatgaacaaggccatcagcttgtgaggttagaagcaaggtggggtcac-tt--acgctacttttctcgccttcataagtttcacaaaggcagtttcaATCTCTCTTGTATATTAAGTGCCATCCAGATGCCAGGGACTCTCGCCTTCATAAGTTTCACAAAGGCAGTTTCAATCTctctcgtatattaagtgccatccagatgccagggactctactgggtagtgtttatgcatgattgcattaatcaccacccagccccgggac-----------------------------------------------------------acaaacagtataattatcctcggtttgttc---gtgaacctggggatgagtgtaaatatcttgcttagggtaaaagaattattaaacatagaatcaa i colAng1.NW_012118821v1 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e otoGar3.GL873658 895507 1124 + 5252280 I e dasNov3.JH576208 1578969 798 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C a score=7098.000000 s hg38.chr2_KI270774v1_alt 32902 1 + 223625 a s panTro5.chr2A 1310443 1 + 111504155 a i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1271342 1 + 114371477 a i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1297161 1 + 1464242 a i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1028283 1 + 81552678 a i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1363633 1 + 108979918 a i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1335811 1 - 111193037 a i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1363929 1 + 3644372 a i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1317722 1 - 10304083 a i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1389061 1 - 107702431 A i chlSab2.chr14 C 0 I 214 s manLeu1.NW_012103754v1 866889 1 - 2200435 a i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1305201 1 - 13651311 a i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 896631 1 + 5252280 A i otoGar3.GL873658 I 1124 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e dasNov3.JH576208 1578969 798 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C a score=7800.000000 s hg38.chr2_KI270774v1_alt 32903 1 + 223625 g s panTro5.chr2A 1310444 1 + 111504155 g i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1271343 1 + 114371477 g i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1297162 1 + 1464242 g i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1028284 1 + 81552678 g i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1363634 1 + 108979918 g i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1335812 1 - 111193037 g i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1363930 1 + 3644372 g i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1317723 1 - 10304083 g i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1389276 1 - 107702431 G i chlSab2.chr14 I 214 C 0 s manLeu1.NW_012103754v1 866890 1 - 2200435 g i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1305202 1 - 13651311 g i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 896632 1 + 5252280 G i otoGar3.GL873658 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e dasNov3.JH576208 1578969 798 + 4416731 I e calJac3.chr14 1310251 0 - 108792865 C a score=311216.000000 s hg38.chr2_KI270774v1_alt 32904 50 + 223625 ttaagcttaagtcatctaagactcacagcccgCCCAGGCTCAGGTCTTGT--- s panTro5.chr2A 1310445 50 + 111504155 ttaagcttaagtcatctaagactcacagcctgCCCAGGCTCAGGTCTTGT--- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1271344 50 + 114371477 ttaagcttaagtcatctaagactcacagcctgCCCAGGCTCAGGTCTTGT--- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1297163 50 + 1464242 ttaagcttaagtcatctaagactcacagcctgCCCAGGCTCAGGTCTTGT--- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1028285 50 + 81552678 ttaagcttaagtcatctaagactcacagcctgCCCAGACTCAGGTCTTGT--- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1363635 50 + 108979918 ttaagcttaagtcatctaagattcacagcctgCCCAGACTCTGGTCTTGT--- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1335813 50 - 111193037 ttaagcttaagtcatctaagattcacagcctgCCCAGACTCTGGTCTTGT--- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1363931 50 + 3644372 ttaagcttaagtcatctaagattcacagcctgCCCAGACTCTGGTCTTGT--- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1317724 50 - 10304083 ttaagcttaagtcatctaagattcacagcctgCCCAGACTCTGGTCTTGT--- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1389277 50 - 107702431 TTAAGCTTAAGTCATCTAAGATTCACAGCCTGCCCAGACTCTGGTCTTGT--- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 866891 50 - 2200435 ttaagcttaagtcatctaagattcacagcctgCCCAGACTCTGGTCTTGT--- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1305203 50 - 13651311 ttaagcttaagtcatctaagattcacagcctgCCCAGACTCTGGTCTTGT--- i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 896633 43 + 5252280 TTGAGCTCAGGCC------TACTCACGGCC-GCCCAGGCTCAGGCCTCAC--- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1579767 38 + 4416731 TTAAACTTAAA--AGTTAAGACACATAGTTCA-------------TTTGTTAG i dasNov3.JH576208 I 798 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e calJac3.chr14 1310251 0 - 108792865 C a score=272781.000000 s hg38.chr2_KI270774v1_alt 32954 37 + 223625 CAACATTTGGAAATGATTATTTCTAAAATAATGAATT s panTro5.chr2A 1310495 37 + 111504155 CAACATTTGGAAATGATTATTTCTAAAATAATGAATT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1271394 37 + 114371477 CAACATTTGGAAATGATTATTTCTAAAATAATGAATT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1297213 37 + 1464242 CAACATTTGGAAATGATTATTTCTAAAATAATGAATT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1028335 37 + 81552678 CAACATTTGGAAATGATTATTTCTAAAATAATGAATT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1363685 37 + 108979918 CAATATTTGGAAATGATTATTTCTAAAATAATGAATT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1335863 37 - 111193037 CAATATTTGGAAATGATTATTTCTAAAATAATGAATT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1363981 37 + 3644372 CAATATTTGGAAATGATTATTTCTAAAATAATGAATT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1317774 37 - 10304083 CAACATTTGGAAATGATTATTGCTAAAATAATGAATT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1389327 37 - 107702431 CAACATTTGGAAATGATTATTTCTAAAATAATGAATT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 866941 37 - 2200435 CAACATTTGGAAACGATTATTGCTAAAATAATGAATT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1305253 37 - 13651311 CAACGTTTGGAAATGATTATTTCTAAAATAATGAATT i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 896676 36 + 5252280 TGACATTTGAGGGTGATTATTAC-AAAGTAATGAGTT i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89945595 36 - 120129022 CATCCTCGGGAAATGATTCTCTTT-TTTTAATGAGTT i mm10.chr12 N 0 C 0 s dasNov3.JH576208 1579805 37 + 4416731 CACAATTTAGAAATAATTATTTCTAAATCAATGAGTC i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e cebCap1.NW_016107827v1 1257709 0 + 1864846 C e calJac3.chr14 1310251 0 - 108792865 C a score=24116.000000 s hg38.chr2_KI270774v1_alt 32991 3 + 223625 ATA s panTro5.chr2A 1310532 3 + 111504155 ATA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1271431 3 + 114371477 ATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1297250 3 + 1464242 ATA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1028372 3 + 81552678 ATA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1363722 3 + 108979918 ATA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1335900 3 - 111193037 ATA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1364018 3 + 3644372 ATA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1317811 3 - 10304083 ATA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1389364 3 - 107702431 ACA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 866978 3 - 2200435 ATA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1305290 3 - 13651311 ATA i colAng1.NW_012118821v1 C 0 C 0 s cebCap1.NW_016107827v1 1257709 3 + 1864846 ATA i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 896712 3 + 5252280 ACA i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89945631 3 - 120129022 ATG i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1579842 3 + 4416731 GTG i dasNov3.JH576208 C 0 I 6442 e saiBol1.JH378218 1164293 3088 - 7082604 M e calJac3.chr14 1310251 0 - 108792865 C a score=1880567.000000 s hg38.chr2_KI270774v1_alt 32994 280 + 223625 AGCTTTTTGGAGGGGATAACAACTTATAATGTCTGTTTAAAATTTTAATGTTTTTAAATTAAAATTTTATA-----AACAACAACAAAAGAAGTAT-GCCCATTTAGGAAATCGGATGGCCTC----AGTCTCCT-----GGCCTTGCTATCACCCCCC-------CAGTGCCTTCTACATTTCAGACAT-----------------TGCATCCCCCTCCCTGCGATGCCTATTAGGATAATTATGGTTTTTTAATGTGTGGTGATTCCTCA-------GAAAATGGTCAGGGGAACTGACTCTGCAGAGGG----------AGAAGGTGGTTCTT s panTro5.chr2A 1310535 280 + 111504155 AGCTTTTTGGAGGGGATAACAACTTATAATGTCTGTTTAAAATTTTAATGTTTTTAAATTAAAATTTTATA-----AACAACAACAAAAGAAGTGT-GCCCATTTAGGAAATCGGATGGCCTC----AGTCTCCT-----GGCCTTGCTATCACCCCCC-------GAGTGCCTTCTACATTTCAGACAT-----------------TGCATCCCCCTCCCTGCGATGCCTATTAGGATAATTACGGTTTTTTAATGTGTGGCAATTCCTCA-------GAAAATGGTCAGGGGAGCCGACTCTGCAGAGGG----------AGAAGGTGGTTCTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1271434 280 + 114371477 AGCTTTTTGGAGGGGATAACAACTTATAATGTCTGTTTAAAATTTTAATGTTTTTAAATTAAAATTTTATA-----AACAACAACAAAAGAAGTGT-GCCCATTTAGGAAATCGGATGGCCTC----AGTCTCCT-----GGCCTTGCTATCACCCCCC-------CAGTGCCTTCTACATTTCAGACAT-----------------TGCATCCCCCTCCCTGCGATGCCTATTAGGATAATTACGGTTTTTTAATGTGTGGCGATTCCTCA-------GAAAATGGTCAGGGGAGCCGACTCTGCAGAGGG----------AGAAGGTGGTTCTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1297253 280 + 1464242 AGCTTTTTGGAGGGGATAACAACTTATAATGTCTGTTTAAAATTTTAATGTTTTTAAATTAAAATTTTATA-----AACAACAACAAAAGAAGTGT-GCCCATTTAGGAAATCGGATGGCCTC----AGTCTCCT-----GGCCTTGCTATCACCCCCC-------CAGTGCCTTCTACATTTCAGACAT-----------------TGCATCCCCCTCCCTGCGATGCCTATTAGGATAATTATGGTTTTTTAACATGTGGCGATTCCTCA-------GAAAATGGTCAGGGGAGCCGACTCTGCAGAGGG----------AGAAGGTGGTTCTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1028375 280 + 81552678 AGCTTTTTGGAGGGGAT---AACTTATAATGTCTGTTTAAAATTTTAATGTTTTTAAATTAAAATTTTATAA--ACAACAACAACAAAAGAAGTGT-GCCCATTTAGGAAATCGGATGGCCTC----AGTCTCCT-----GGCCTTGCTATCACCCCCC-------CAGTACCTTCTACATTTCAGACAT-----------------TGCATCCCCCTCCCTGCGATGCCTATTAGGGTAATTATGGTTTTGTAATGTGTGGTGATTCCTCA-------GAAAAGAGTCAAGGGATCCGACTCTGCAGAGGG----------AGAAGGTGGTTCTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1363725 281 + 108979918 AGCCTTTTGGAGGGGATAACAACTTATAATGTCTGTTTAAAAATTTAATGTTTTTAAATTAAAATTTTATAA--ACAACAACAACAAAAGAAGTGT-GCCCATTTAGGAAATGGGATGACCTC----AGTCTCCT-----GGCCTTGCTGTCACCCCCC--------AGTGCCTTCTACATTTCAGACAT-----------------TGCATTGCCCTCCCCACAATGCCTATTAGGATAATTACGG-TTTTTAATATGTGGCGATTCCTCA-------GAAAACGGTCAGGGGAGCAGACTCTGCAGAGGG----------AGAAGGTGGTTCTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1335903 281 - 111193037 AGCCTTTTGGAGGGGATAACAACTTATAATGTCTGTTTAAAAATTTAATGTTTTTAAATTAAAATTTTATAA--ACAACAACAACAAAAGAAGTGT-GCCCATTTAGGAAATGGGATGACCTC----AGTCTCCT-----GGCCTTGCTGTCACCCCCC--------AGTGCCTTCTACATTTCAGACAT-----------------TGCATTGCCCTCCCCACAATGCCTATTAGGATAATTACGG-TTTTTAATATGTGGCGATTCCTCA-------GAAAACGGTCAGGGGAGCAGACTCTGCAGAGGG----------AGAAGGTGGTTCTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1364021 281 + 3644372 AGCCTTTTGGAGGGGATAACAACTTATAATGTCTGTTTAAAAATTTAATGTTTTTAAATTAAAATTTTATAA--ACAACAACAACAAAAGAAGTGT-GCCCATTTAGGAAATGGGATGACCTC----AGTCTCCT-----GGCCTTGCTGTCACCCCCC--------AGTGCCTTCTACATTTCAGACAT-----------------TGCATTGCCCTCCCCACAATGCCTATTAGGATAATTACGG-TTTTTAATATGTGGCGATTCCTCA-------GAAAACGGTCAGGGGAGCAGACTCTGCAGAGGG----------AGAAGGTGGTTCTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1317814 281 - 10304083 AGCCTTTTGGAGGGGATAACAACTTATAATGTCTGTTTAAAAATTTAATGTTTTTAAATTAAAATTTTATAA--ACAACAACAACAAAAGAAGTGT-GCCCATTTAGGAAATGGGATGACCTC----AGTCTCCT-----GGCCTTGCTGTCACCCCCC--------AGTGCCTTCTACATTTCAGACAT-----------------TGCATAGCCCTCCCCGCAATGCCTATTAGGATAATTACGG-TTTTTAATATGTGGCGGTTCCTCA-------GAAAACGGTCAGGGGAGCAGACTCTGCAGAGGG----------AGAAGGTGGTTCCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1389367 279 - 107702431 AGCCTTTTGGAGGGGATAACAACTTATAATGTCTGTTTAAAAATTTAATGTTTTTAAATTAAAATTTTATA-----AACAACAACAAAAGAAGTGT-GCCCATTTAGGAAATGGGATGACCTC----AGTCTCCT-----GGCCTTGCTGTCACCCCCC--------AGTGCCTTCTACATTTCAGACAT-----------------TGCATCGCCCTCCCCGCAATGCCTATTAGGATAATTACGGTTTTTTAATATGTGGAGATTCCTCA-------GAAAACGGTCAGGGGAGCAGACTCTGCAGAGGG----------AGAAGGTGGTTCTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 866981 281 - 2200435 AGCCTTTTGGAGGGGATAACAACTTATAATGTCTGTTTAAAAATTTAATGTTTTTAAATTAAAATTTTATAA--ACAACAACAACAAAAGAAGTGT-GCCCATTTAGGAAATGGGATGACCTC----AGTCTCCT-----GGCCTTGCTGTCACCCCCC--------AGTGCCTTCTACATTTCAGACAT-----------------TGCATTGCCCTCCCCGCAATGCCTATTAGGATAATTACGG-TTTTTAATATGTGGCGATTCCTCA-------GAAAACGGTCAGGGGAGCAGACTCTGCAGAGGG----------AGAAGGTGGTTCCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1305293 282 - 13651311 AGCCTTTTGGAGGGGATAATAACTTATAATGTCTGTTTAAAAATTTAATGTTTTTAAATTAAAATTTTATAA--ACAACAACAACAAAAGAAGTGT-GCCCATTTAGGAAATGGGATGACCTC----AGTCTCCT-----GGCCTTGCTATCACCCCGC--------AGTGCCTTCTACATTTCAGACAT-----------------TGCATCGCCCTCCCCGCAATGCCTATTAGGATAATTACGGTTTTTTAATATGTGGCGATTCCTCA-------GAAAACGGTCAGGGGAGCAGACTCTGCCGAGGG----------AGAAGGTGGTTCTT i colAng1.NW_012118821v1 C 0 C 0 s cebCap1.NW_016107827v1 1257712 273 + 1864846 AGCTTTTTGGAGGGAGTAACAACTTAAAATGTCTGTTTAAAAATTTAATGTTTTTAAATTAAAATTTTACA---------ATAACAAAAGAAGTAT-GCCCATTTAGAAAATCAGATGGCCTC----AGTCTCTT-----GGCCTTGCTATCATCTCCT--------CATGCCTTCTGCGTTTCAGACAC-----------------GGCATCCCCCGCCC-ATGATGCCTCTTAGGATAATTACAGTTTTCTAATATGTGGTGATTCCTCA-------GAAAATGGGCA-GGGAGCAGACTCTGCAGAGGG----------AGAAGGTGGTTCTT i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 896715 242 + 5252280 AGCTTTTTGGAAGGGATTACAAATTGCAATGTCtatttaaaaattt-ttatttataaattaaaa-tttata--------aataatGAAAGAATTGTAGCCCATTTAGATGTTTAGA-GATCTA----ATTGTCTT----GGGGCTTGGCTTCCCTTCAT--------GG--------GCATGTCCTGCTG-----------------GGCAGCCCCTTCCCCAGACATCC----------ACTGTGGCATTGTAAGAAAGGGTGAGGCCACC-------AAATATGATCA---------------CAGAAGA----------GAGAGGGGACTCTG i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89945634 280 - 120129022 AGATTTTTGAAGATAATAATAAATTGTAGTGTCTGTTTAAAATTTG------TTTTAATTGAAATTTAAGGATTTTATTAGTGACAAGTAAATGCT-ATCCAATTAGATGATCAGAAAGCCCC------TCCCCTCAAGAGGTCCCTTAGTCACATCCTATGTCTTGGGTCTCTTCTACAGCACAGATAC-----------------CACTTTCC--------AGGTGCCACTTAG----ATTTGGG------GAAAGGCAGGGGACCCCCACCTCCTGGGACATGATCCTGGG--CTGAACCAGCACAGAGATGAGGAAATAGAAGATA------ i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1586287 288 + 4416731 AGACTTTTTCAGGGAATA------TCTTATGTC------AACatataattttttttagttaaaatttttaaattttataaaGAAAACAGAAAGATG-GCCCATTTAAATAATCAGAAAGCATCTGGAAGTCTTCC-----AGACATGCCTTCatttatt-------gaatacctactattttccaggcaccgtgcagttgttagggatgcaTTCTCTTTC-------ACCCTTGGTGTAAATTACAGTTTTATGACAAATGATGATTTCACA------AGGAACTAAACACAAGGAAAGAATTCACTGGAAA----------AGAACATGTTTCTG i dasNov3.JH576208 I 6442 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M e calJac3.chr14 1310251 0 - 108792865 C a score=8101605.000000 s hg38.chr2_KI270774v1_alt 33274 968 + 223625 CCTGGAAAGCG-------GAACTTGGATGTAACCACATTAGTTCCTGCTGGGCTTTGGTC--GAAT--TAATTTCAAG---CCTTTGAAAGA---------GGAGGGAAAGTGTCACTGTGTGAATGGAGGTCTGGAAGGAGGTTGCCC--TGCAACACAGCTT----------GCCCCGATACACGTGCAAATGT-----------------GTTC------TCTGCCT-----C-TT---------AGAAA---AGCTACC-AGATTGCCCATTTATT--TATGATTATCCATTGTACTAATCTGTATGGTGCTTCTTGCAGGAGTTTGGCAATTTAT-AAATCAC----------------------AGATTTTTCCAGCAAGGACAG-CCGGATGC--TGTTTCTGCACATGTGC-TTTGAAATATAAGCACAC---TGTCATTTGCTGGCATTGATGACTTGAGTG--------AAGGCT-GAG-GTTTTGGCTCAGAGAAACATGATGAATGTTGACGATGGAAAGGG--------AACAGTGAT--TGTAAGAAGTC-TATTTTATTAAATGAGAAAATAGAAGTGTAAATGCCAACATGCTTCCAAAAAAAGATATATGAAGTTTT---TTCAGCTGTCATTATTGgaaaagaaaaag-aaaagaaaga----aaagCCCAACAGGCTATAATGACTAGCCTTACGAAAGCAAATGATATTTTGAGTGAATAGGGACATGATTGACTTGAATTGATGCCTGATTTTCATGTTTTTGTTAATTATTTGTAAGACAAAATTATCAGAAAATGTCTTCCCAATTCCT-TAATATGTTTATTCCTACTTTTACTC-TCAATATCAAGTTTGGAATGGGTAAAATTCTACACCATCTCCCCACGAAATTGACCTTGTTCGGCCGATAAGTGTAGGAGTTATTTATCTTTGTCAGAACTTGGAAATTTCCAAATAAAATATTT------ATACAAGCAGAAGAAAGCAGGCCCACA---GTTCT-CTTAATTTCCTTGTTTTCCCTCTCTTAGTGTATGTCTACCTGACTCTGGAGCTACGGTAAAGTGCAAGCACTGTGCTTTGTGAAAGCAGCT s panTro5.chr2A 1310815 968 + 111504155 CCTGGAAAGCG-------GAACTTGGATGTAACCACATTAGTTCCTGCTGGGCTTTGGTC--GAAT--TAATTTCAAG---CCTTTGAAAGA---------GGAGGGAAAGTGTCACTGTGTGAATGGAGGTCTGGAAGGAGGTTGCCC--TGCAACACAGCTG----------GCCCCGATACACGTGCAAATGT-----------------GTTC------TCTGCCT-----C-TT---------AGAAA---AGCTACC-AGATTGCCCATTTATT--TATGATTATCCATTGTACTAATCTGTATGGTGCTTCTTGCAGGAGTTTGGCAATTTAT-AAATCAC----------------------AGATTTTTCCAGCAAGGACAG-CCGGATGC--TGTTTCTGCACATGTGC-TTTGAAATATAAGCACAC---TGTCATTTGCTGGCATTGATGACTTGAGTG--------AAGGCT-GAG-GTTTTGGCTCAGAGAAACATGATGAATGTTGACGATGGAAAGGG--------AACAGTGAT--TGTAAGAAGTG-TATTTTATTAAATGAGAAAATAGAAGTGTAAATGCCAACATGCTTCCAAAAAAAGATATATGAAGTTTT---TTCAGCTGTCATTATTGgaaaagaaaaag-aaaagaaaga----aaagCCCAACAGGCTATAATGACTAGCCTTACGAAAGCAAATGATATTTTGAGTGAATAGGGACATGATTGACTTGAATTGATGCCTGATTTTCATGTTTTTGTTAATTATTTGTAAGACAAAATTATCAGAAAATGTCTTCCCAATTCCT-TAATATGTTTATTCCTACTTTTACTC-TCAATATCAAGTTTGGAATGGGTAAAATTCTACACCATCTCCCCACGAAATTGACCTTGTTCGGCCGATAAGTGTAGGAGTTATTTATCTTTGTCAGAACTTGGAAATTTCCAAATAAAATATTT------ATACAAGCAGAAGAAAGCAGGCCCACA---GGTCT-CTTAATTTCCTTGTTTTCCCTCTCTTAGTGTATGTCTGCCTGACTCTGGAGCTACGGTAAAGTGCAAGGACTACACTTTGTGAAAACAGCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1271714 968 + 114371477 CCTGGAAAGCG-------GAACTTGGATGTAACCACATTAGTTCCTGCTGGGCTTTGGTC--GAAT--TAATTTCAAG---CCTTTGAAAGA---------GGAGGGAAAGTGTCACTGTGTGAATGGAGGTCTGGAAGGAGGTTGCCC--TGCAACACAGCTG----------GCCCCGATACACGTGCAAATGT-----------------GTTC------TCTGCCT-----C-TT---------AGAAA---AGCTACC-AGATTGCCCATTTATT--TATGATTATCCATTGTACTAATCTGTATGGTGCTTCTTGCAGGAGTTTGGCAATTTAT-AAATCAC----------------------AGATTTTTCCAGCAAGGACAG-CCGGATGC--TGTTTCTGCACATGTGC-TTTGAAATATAAGCACAC---TGTCATTTGCTGGCATTGATGACTTGAGTG--------AAGCCT-GAG-GTTTTGGCTCAGAGAAACATGATGAATGTTGACGATGGAAAGGG--------AACAGTGAT--TGTAAGAAGTG-TATTTTATTAAATGAGAAAATAGAAGTGTAAATGCCAACATGCTTCCAAAAAAAGATATATGAAGTTTT---TTCAGCTGTCATTATTGgaaaagaaaaag-aaaagaaaga----aaagCCCAACAGGCTATAATGACTAGCCTTACGAAAGCAAATGATATTTTGAGTGAATAGGGACATGATTGACTTGAATTGATGCCTGATTTTCATGTTTTTGTTAATTATTTGTAAGACAAAATTATCAGAAAATGTCTTCCCAATTCCT-TAATATGTTTATTCCTACTTTTACTC-TCAATATCAAGTTTGGAATGGGTAAAATTCTACACCATCTCCCCACGAAATTGACCTTGTTCGGCCGATAAGTGTAGGAGTTATTTATCTTTGTCAGAACTTGGAAATTTCCAAATAAAATATTT------ATACAAGCAGAAGAAAGCAGGCCCACA---GGTCT-CTTAATTTCCTTGTTTTCCCTCTCTTAGTGTATGTCTGCCTGACTCTGGAGCTACGGTAAAGTGCAAGGACTACGCTTTGTGAAAACAGCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1297533 964 + 1464242 CCTGGAAAGCG-------GAACTTGGATGTAACCACATTAGTTCCTGCTGGGCTTTGGTC--GAAT--TAATTTCAAG---CCTTTGAAAGA---------GGA-GGAAAGTGTCACTGTGTGAATGGAGGTCTGGAAGGAGGTCGCCC--TGCAACACAGCTG----------GCCCCGATACACGTGCAAACGT-----------------GTTC------TCTGCCT-----C-TT---------AGAAA---AGCTACC-AGATTGCCCATTTATT--TATGATTATCCATTGTACTCATCTGTATGGTGCTTCTTGCAGGAGTTGGGCAATTTAT-AAATCAC----------------------AGATTTTTCCAGCAAGGACAG-CCGGATGC--TGTTTCTGCACATGTGC-TTTGAAATATAAGCACAC---TGTCATTTGCTGGCATTGATGACTTGAGTG--------AAGGCT-GAG-GTTTTGGCTCAGAGAAACATGATGAATGTTGATGATGGAAAGGG--------AACAGTGAT--TGTAGGACGTG-TATTTTATTAAATGAGAAAATAGAAGTGTAAATGCCAACATGCTTCC-AAAAAAGATATATGAAGTTTT---TTCAGCTGTCATTATAGgaaaagaaaaag-aaaagaaaga----aaagCCCAACAGGCTATAATGACTAGCCTTATGAAAGCAAATGATA-TTTGAGTGAATAGGGACATGATTGACTTGAATTGATGCCTGA-TTTCATGTTTTTGTTAATTATCTGTAAGACAAAATTATCAGAAAATGTCTTCCCAATTCCT-TAATATGTTTATTCCTACTTTTACTC-TCAATATCAAGTTTGGAATGGGTAAAATTCTACATCATCTCCCCATGAAATTGACCTTGTTCGGCAGATAAGGGTAGGAGTTATTTATCTTTGTCAGAACTTGGAAATTTCCAAATAAAATATTT------ACACAAGCAGAAGAAAGCAGGCCCACA---GTTCT-CTTAATTTCCTTGTTTTCCCTCTCTTAGTGTATGTCTACCTGACTCTGGAGCTACGGTGAAGTGCAAGCACTACACTTTGTGAAAACAGCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1028655 967 + 81552678 CCTGGAAAGTG-------GAACTTGGATGTAACCACATTAGTTCCTGCTGGGCTTTGGTC--GAAT--TAATTTCAAG---CCTTTGAAAGA---------GGAGGGAAAGTGTCACTGTGTGAATGGAGGTCTGGAAGGAGGTTGCCC--TGCAACACAGCTG----------GCCCTGATACACGTGCAAACGT-----------------GTTC------TCTGCCT-----C-TT---------AGAAA---AGCTACC-AGATTGCCCATTTATT--TATGATTATCCATTGTACTAATCTGTATGGTGCTTCTTGCAGGAGTTTGGCAATTTAT-AAATCAC----------------------AGATTTTTCCAGCAAGGACAG-CCGGATGC--TGTTTCTGCACATGTGC-TTTGATACATAAGCACAC---AGTCATTTGCTGGCATTGATGACTTGAGTG--------AAGGCT-GAG-GTTTTGGCTCAGAGAAACATGATGAATGTTGATGATGGAAAGGG--------GACAGTGAT--TGTAAGAGGTG-TATTTTATTAAATGAGAAAATAGAAGCATAAATGCCAACATGCTTCC-AAAAAAGATATATGAAGTTTT---TTCTGCTATCATGATTGgaaaagaaaaag-aaaagaaaga----aaagCCCTATGGGCTATAATGACTAGCCTTACGAAAGCAAATGATATTGTGAGTGAATGGGGACATGATTGACTTGAATTGATGCCTGATTTTCATATTTTTGTTAATTATTTGTAAGACAAAATTATCAGAAAATGTCTTCCCCATTCCT-TAATATGTTTATTACTACTTTTACTC-TCAATATCAAGTTTGGAATGGGTAAAATCCTACACCATCTCCGCACGAAATTGACCTGGTTCGGCCGATAAGTGGAGGAGTTATTTATCTTTGTCAGAACTTGGAAATTTCCAAATAAAATATTT------ACACAAGCAGAAGAAAGCAGGCCCGCA---GTTCT-CTTAATTTCCTTGCTTTCCCTCTCGTAGTATATGTCTACCTGACTCTGGAGCAATGGTAAATTGCAAGGACTACGCTTTGTGAAAACAGCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1364006 958 + 108979918 CCTGGAAGGCG-------GAACTTGGATGTAACCACATTAGTTCCTGCTGGGCTTTGGCT--GAAT--TAATTTCAAG---CCTTTGAAAGA---------GGAGGGAAAGTGTTACAGTGTGAATGGAGGTCTGGAAGGAGGTCGCCC--TGCAACACAGCTG----------GCCCCAATACACGTGCAAATGT-----------------GTTC------TCTGCCT-----C-TT---------AGAAA---AGCTACC-AGATTGCCCATTTATT--TATGATTATCCATTGTAGTGATCTGTGTGGTGCTTCTTGCAGGAGTTTGGCAATTTAT-AAATCAC----------------------AGATTTTTCCAGCAAGGACAG-CCAGATGC--TGTTTCTGCACATATGC-CTAGAAATATAAGCACGC---TGTCATTTGCTGGCACTGATGACTTGAGTG--------AAGGCT-AAG-GTTTTGGCTCAGAGAAACATGATGAATGTTGGTGATGGAAAGGG--------AACAGTGAT--TGTAACAACTG-TATTTTATTGAATGAGAAAATAGAAGTATAAATGCCAACGTGCTTCC-AAAAAAGATACATGAAGTTTT---TTTAGCTGTCATTATTGgaaaagaaaaagaaaaagaaaga----aaagCCAATCGGGCTCTAATGACTAGCCTTACGAAAGCAAATGATATTTTGAGTGAATAGGGACATGATTGACTTGAATTGGTGCCTGATTTTCATGTTTTTGTTCATTATTTGTAAGACAAAATTATCAGAAAATGTCTTCCCAATTCCT-TAATATGTTTATTACTACTTTTACTC-TCAGTATCAAGTTTGGAATGGGTAAAATTCTATACTATCTCCTCACAAAATTGACCTTGTTCGGCCAGTAAGTGTAAGAGCTCTTTATCTTTGTCAGAACTTGGAAATTTCCAAATAAAATATTT------ACACAAGCAGAAGAAAGCAGCCCCACC---GTTCT-CTTAATTTCCTTGCTTTCCCTC----------TGTCTGCCTGACTCCGGAGCTACAGTAAATTGCAAGGACTACGCTTTGTGAAAACAGCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1336184 958 - 111193037 CCTGGAAGGCG-------GAACTTGGATGTAACCACATTAGTTCCTGCTGGGCTTTGGCT--GAAT--TAATTTCAAG---CCTTTGAAAGA---------GGAGGGAAAGTGTTACAGTGTGAATGGAGGTCTGGAAGGAGGTCGCCC--TGCAACACAGCTG----------GCCCCAATACACGTGCAAATGT-----------------GTTC------TCTGCCT-----C-TT---------AGAAA---AGCTACC-AGATTGCCCATTTATT--TATGATTATCCATTGTAGTGATCTGTGTGGTGCTTCTTGCAGGAGTTTGGCAATTTAT-AAATCAC----------------------AGATTTTTCCAGCAAGGACAG-CCAGATGC--TGTTTCTGCACATATGC-CTAGAAATATAAGCACGC---TGTCATTTGCTGGCACTGATGACTTGAGTG--------AAGGCT-AAG-GTTTTGGCTCAGAGAAACATGATGAATGTTGGTGATGGAAAGGG--------AACAGTGAT--TGTAACAACTG-TATTTTATTGAATGAGAAAATAGAAGTATAAATGCCAACGTGCTTCC-AAAAAAGATACATGAAGTTTT---TTTAGCTGTCATTATTGgaaaagaaaaagaaaaagaaaga----aaagCCAATCGGGCTCTAATGACTAGCCTTACGAAAGCAAATGATATTTTGAGTGAATAGGGACATGATTGACTTGAATTGGTGCCTGATTTTCATGTTTTTGTTCATTATTTGTAAGACAAAATTATCAGAAAATGTCTTCCCAATTCCT-TAATATGTTTATTACTACTTTTACTC-TCAATATCAAGTTTGGAATGGGTAAAATTCTATACTATCTCCTCACAAAATTGACCTTGTTTGGCCAGTAAGTGTAAGAGCTCTTTATCTTTGTCAGAACTTGGAAATTTCCAAATAAAATATTT------ACACAAGCAGAAGAAAGCAGCCCCACC---GTTCT-CTTAATTTCCTTGCTTTCCCTC----------TGTCTGCCTGACTCTGGAGCTACAGTAAATTGCAAGGACTACGCTTTGTGAAAACAGCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1364302 958 + 3644372 CCTGGAAGGCG-------GAACTTGGATGTAACCACATTAGTTCCTGCTGGGCTTTGGCT--GAAT--TAATTTCAAG---CCTTTGAAAGA---------GGAGGGAAAGTGTTACAGTGTGAATGGAGGTCTGGAAGGAGGTCGCCC--TGCAACACAGCTG----------GCCCCAATACACGTGCAAATGT-----------------GTTC------TCTGCCT-----C-TT---------AGAAA---AGCTACC-AGATTGCCCATTTATT--TATGATTATCCATTGTAGTGATCTGTGTGGTGCTTCTTGCAGGAGTTTGGCAATTTAT-AAATCAC----------------------AGATTTTTCCAGCAAGGACAG-CCAGATGC--TGTTTCTGCACATATGC-CTAGAAATATAAGCACGC---TGTCATTTGCTGGCACTGATGACTTGAGTG--------AAGGCT-AAG-GTTTTGGCTCAGAAAAACATGATGAATGTTGGTGATGGAAAGGG--------AACAGTGAT--TGTAACAACTG-TATTTTATTGAATGAGAAAATAGAAGTATAAATGCCAACGTGCTTCC-AAAAAAGATACATGAAGTTTT---TTTAGCTGTCATTATTGgaaaagaaaaagaaaaagaaaga----aaagCCAATCGGGCTCTAATGACTAGCCTTACGAAAGCAAATGATATTTTGAGTGAATAGGGACATGATTGACTTGAATTGGTGCCTGATTTTCATGTTTTTGTTCATTATTTGTAAGACAAAATTATCAGAAAATGTCTTCCCAATTCCT-TAATATGTTTATTACTACTTTTACTC-TCAATATCAAGTTTGGAATGGGTAAAATTCTATACTATCTCCTCACAAAATTGACCTTGTTCGGCCAGTAAGTGTAAGAGCTCTTTATCTTTGTCAGAACTTGGAAATTTCCAAATAAAATATTT------ACACAAGCAGAAGAAAGCAGCCCCACC---GTTCT-CTTAATTTCCTTGCTTTCCCTC----------TGTCTGCCTGACTCTGGAGCTACAGTAAATTGCAAGGAGTACGCTTTGTGAAAACAGCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1318095 959 - 10304083 CCTGGAAGGCG-------GAACTTGGATGTAACCACATTAGTTCCTGCTGGGCTTTGGCT--GAAT--TAATTTCAAG---CCTTTGAAAGA---------CGAGGGAAAGTGTTACAGTGTGAATGGAGGTCTGGAAGGAGGTCGCCC--TGCAACACAGCTG----------GCCCCAATACACGTGCAAATGT-----------------GTTC------TCTGCCT-----C-TT---------AGAAA---AGCTACC-AGATTGCCCATTTATT--TATGATTATCCATTGTAGTGATCTGTGTGGTGCTTCTTGCAGGAGTTTGGCAATTTAT-AAATCAC----------------------AGATTTTTCCAGCAAGGACAG-CCAGATGC--TGTTTCTGCACATATGC-TTAGAAATATAAGCAGGC---TGTCATTTGCTGGCGCTGATGACTTGAGTG--------AAGGCT-AAG-GTTTTGGCTCAGAGAAACATGATGAATGTTGGTGATGGAAAGGG--------AACAGTGAT--TGTAACAACTGTTATTTTATTGAATGGGAAAATAGAAGTATAAATGCCAACGTGCTTCC-AAAAAAGATACATGAAGTTTT---TTTAGCTGTCATTATTGgaaaagaaaaagaaaaagaaaga----aaagCCCATCGGGCTCTAATGACTAGCCTTACGAAAGCAAATGATATTTTGAGTGAATAGGGACATGATTGACTTGAATTGGTGCCTGATTTTCATGTTTTTGTTAATTATTTGTAAGACAAAATTATCAGAAAATGTCTTCCCAATTCCT-TAATATGTTTATTACTACTTTTACTC-TCAATATGAAGTTTGGAATGGGTAAAATTCTATACCATCTCCTCACAAAATTGACCTTGTTCGGCCAATAGGTGGAGGAGCTATTTATCTCTGTCAGAACTTGGAAATTTCCAAATAAAATATTT------ACACCAGCAGAAGAAAGCAGCCCCACG---GTTCT-CTTAATTTCCTTGCTTTCTCTC----------TGTCTGCCTGACTCTGAAGCTACAGTAAATTGCAAGGACTACGCTTTGTGAAAACAGCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1389646 958 - 107702431 CCTGGAAGGCG-------GAACTTGGATGTAACCACATTAGTTCCTGCTGGGCTTTGGCT--GAAT--TAATTTCAAG---CCTTTGAAAGA---------GGAGGGAAAGTGTTACAGTGTGAATGGAGGTCTGGAAGGAGGTCGCCC--CGCAACACAGCTG----------GCCCCAATACACGTGCAAATGT-----------------GTTC------TCTGCCT-----C-TT---------AGAAA---AGATGCC-AGATTGCCCATTTATT--TATGATTATCCATTGTAGTGATCTGTATGGTGCTTCTTGCAGGAGTTTGGCAATTTAT-AAATCAC----------------------AGATTTCTCCAGCAAGGACAG-CCAGATGC--TGTTTCTGTACATGTGC-TTTGAAATATAAGCACGC---TGTCCTTTGCTGGTACTGATGGCTTGAGTG--------AAGGCT-AAG-GTTTTGGCTCAGAGAAACAAGATGAATGTTGATGATGGAAAGGG--------AACAGTGAT--TGTAAGAACTG-TATTTTATTAAATGAGAAAATAGAAGTATAAATGCCAACGTGCTTCC-AAAAAGGATACATGAAGTTTT---TTTAGCTGTCATTATTGgaaaagaaaaagaaaaagaaaga----aaagCCCAATGGGCTCTAATGACTAGCCTTACGAAAGCAAATGATATTTTGAGTGAATAGGGACATGATTGACTTGAATTGGTGCCTGATTTTCATGTTTTTGTTAATTATTTGTAAGATGAAATTATCAGAAAATGTCTTCCCAATTCCT-TAATATGTTTATTACTACTTTTACTC-TCAATATCAAGTTTGGAATGGGTAAAATTCTATACCATCTCCTCACAAAATTGACCTTGTTCGGCCAATAGGTGGAGGAGCTATTTATCTCTGTCAGAACTTGGAAATTTCCAAATAAAATATTC------ACACAAGCAGAAGAAAGCAGCCCCACG---GTTCT-CTTAATTTCCTTGCTTTCCCTC----------TGTCTGCCTGACTCTGGAGCTACAGTAAATTGCAAGGACTACGCTTTGTGAAAACAGCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 867262 958 - 2200435 CCTGGAAGGCG-------GAACTTGGATGTAACCACATTAGTTCCTGCTGGGCTTTGGCT--GAAT--TAATTTCAAG---CCTTTGAAAGA---------CGAGGGAAAGTGTTACAGTGTGAATGGAGGTCTGGAAGGAGGTCGCCC--TGCAACACAGCTG----------GCCCCAATACACGTGCAAATGT-----------------GTTC------TCTGCCT-----C-TT---------AGAAA---AGCTACC-AGATTGCCCATTTATT--TATGATTATCCATTGTAGTAATCTGTGTGGTGCTTCTTGCAGGAGTTTGGCAATTTAT-AAATCAC----------------------AGATTTTTCCAGCAAGGACAG-CCAGATGC--TGTTTCTGCACATATGC-TTAGAAATATAAGCACGC---TGTCATTTGCTGGCGCTGATGACTTGAGTG--------AAGGCT-AAG-GTTTTGGCTCAGAGAAACATGATGAATGTTGGTGATGGAAAGGG--------AACAGTGAT--TGTAACAACTG-TATTTTATTGAATGAGAAAATAGAAGTATAAATGCCAACGTGCTTCC-AAAAAAGATACATGAAGTTTT---TTTAGCTGTCATTATTGgaaaagaaaaagaaaaagaaaga----aaagCCCAATGGGCTCTAATGACTAGCCTTACGAAAGCAAATGATATTTTGAGTGAATAGGGACATGATTGACTTGAATTGGTGCCTGATTTTCATGTTTTTGTTAATTATTTGTAAGACAAAATTATCAGAAAATGTCTTCCCAATTCTT-TAATATGTTTATTACTACTTTTACTC-TCAATATGAAGTTTGGAATGGGTAAAATTCTATACCATCTCCTCACAAAATTGACCTTGTTCGGCCAATAGGTGGAGGAGCTATTTATCTCTGGCAGAACTTGGAAATTTCCAAATAAAATATTT------ACACAAGCAGAAGAAAGCAGCCCCACG---GTTCT-CTTAATTTCCCTGCTTTCCCTC----------TGTCTGCCTGACTCTGGAGCTACAGTAAATTGCAAGGACTACGCTTTGTGAAAACAGCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1305575 959 - 13651311 CCCGGAAGGCG-------GAACTTGGATGTAACCACATTAGTTCCTGCTGGGCTTTGGCT--GAAT--TAATTTCAAG---CCTTTGAAAGA---------GGAGGGAAAGTGTTACATTGTAAATGGAGGTCTGGAAGGAGGTGGCCC--TGCAACACAGCTG----------GCCCTGATACACGTGCAAATGT-----------------GTCC------TCTGCCT-----C-TT---------AGAAA---AGCTACC-AGATTGCCCATTTATT--TATGATTATCCATTGTAGTCATCTGTATGGTGCTTCTTGCAGGAGTTTGGCAATTTAT-AAATCAC----------------------AGATTTTTCCAGCAAGGACAG-CCAGATGC--TGTTTCTGCACATATGC-TTTGAAATATAAGCACGC---TGTCATTTGCTGGCACTGATGACTTGAGTG--------AAGGCT-AAG-GTTTGGGCTCAGAGAAACATGATGAATGTTGATGACGGAAAGGGAACAGTGTAACAGTGAT--TGTAAGAACTG-TATTTTATTAAATGAGAAAATAGAAGTATAAATGCCAACGTGCTTCC-AAAAAAGATACACGAAGTTTT---TTTAGCTGTCATTATTGGAAAAGAAAAAG-------AAGA----AAAGCCCATCGTGCTGTAATGACTAGCCTTACCAAAGCAAATGATATTTTGAGTGAATAGGGACATGATTGACTTGAATTGGTGCCTGATTTTCATGTTTCTGTTAATTATTTGTAAGACAAAATTATCAGAAAATGTCTTCCCAATTCCT-TAATATGTTTATTACTACTTTTACTC-TCAATATCAAGTTTGGAATGGGTAAAATTCTATACCATCTCCTCACAAAATTGACCTTGTTCGGCCAATAAGTGTAGGAGTTATTTATCTTTGTCAGAACTTGGAAATTTCCAAATAAAATATTT------ACACAAGCAGAAGAAAGCAGCCCCATG---GTTCT-CTTAATTTCCTTGCTTTCTCTC----------TGTCTGCCTGACTCTGGAGCTACAGTAAATTGCAAGGACTACGCTTTGGGAAAACAGCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1310251 939 - 108792865 CCTGGAAAGCA-------GAACTTGGACGTAAGCACGTTAGCTCCTGTGGGGCTTTGGTT--GAAT--TAATTTCAGG---CCTTTGAAAGA---------GGAGAGTAAGTGTCGCTCTGTAAACGGAGGTCTGGAAGGAGGTCACCC--TGCAACACGGCTG----------GCCCGCATACACATGCAGATGT-----------------G-----------------------TT---------AGGAA---AGCTACC-AGATTGTCCACTGATT--TATGCTTACCCATTGTGCTGATGTCTATGGTGCTTCCTGCAGGGGTCTGGCAATTTAT-AAATCAC----------------------AGATTTTTCCAGCAAGGACAG-ATGGGTGC--TGTTTCTGCACATGTGC-TTTGAAATTTGAGCACAT---TGTCATTTGCTGGCACCGATGACCTGAGTG--------AAGTCT-GAG-GTTTTGGCTCAGAGATGCACGATTAATGTTGATAATGGTAAGGA--------AACAGCGTT--GGC-GGAACTG-TATTTTCTTAAATGAGGAAACAGAACTATAAATGTCAACATGCTTCC-AAAAAAGATACATGAAGTTTT---TTCAGCTGTCATTATTGGAAAAGAAAAAG-AAAAGAC--A----AAAGCTAAT--------------GGGCCTTGCAAAAGCAAATGATATTTTGAGTGAAGAGGGACATGATTAACTTGAATTGGTGCCTGTCTTTCATGGTTTTGTTAATTATTTGCAAGACAAAATTATCTGAAAATGTCTTCCCAATTCCT-TCATATATTTATTATGACTTTTATTC-TCAATGTCAAGTTTGAAATTAGTAAAATGCTCTACCATCTCCTCACGAAATTGACCTTGTTTGGGCAGCAAGTATAGGAGTTATTTCTCTTTGTCAGAACTTGGAAATTTCCAAATAAAGTATTT------ACACAAGCAAAAGAAAGCAGGCTGACA---GTTCT-TTTAATTTCCTTGCTTTCCCTCTCTTAATATATGTCCACCTGACTCCAGAGCTACAGCAAATTGCAAGGACCACGCTTTGTGAAAACAGCT i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1257985 952 + 1864846 TTTGGAAAGCA-------GAACTTGGACGTAACCACGTTAGCTCCTGTGGGGCTTTGGTT--GAAT--TAACTTCAAG---CCTTTGAAGGA---------GGAGGGAAAGTGTCGCTGTGTGAACGGAGGTCTGGAAGGAGGTCACCC--TGCAACACGGCTG----------GCCCTGATAC-CGTGCAGATGT-----------------G-----------------------TT---------AGAAA---AGCTGCC-AGATTGTCCATTGATT--TATGATTATCCATTGTACTGATCTCTATGGTGCTTCTAGCAGGGGTTTGGCAATTTAT-AAATCAC----------------------AGACTTTTCCAGCAAGGACAG-ATGGATGC--CGTTTCTGCACATGTGC-TTTGAAATATGAGCACAT---AGTCCTTTGCTGGCACCGATGACTTGAGTG--------AAGTCT-GAG-GTTTTGGCTCAGAGAAGCATGATTAACGTTGATAATGGCAAGGG--------AACAGTGAT--TGCAGGAACTG-TATTTTCTTAAATGAGAAAATAGAAGTATAAATGCCAACATGCTTCC-AAAAAGGATATATGAAGTTTT---TTCAGCTGTCATTACTGgaaaagaaaaag-aaaagacaga----aaagCTAACCA-GCTATAATGAGTAGCCTTAGGAAAGCAAATGGTGTTTTGAGTGAAGAGGGACATGATTGACTTGAATTGGTGCCTGTCTTTCATGTTTTTGTTAATTATTTGTAAGACAAAGTTATCTGAAAATGTCTTCCCAATTCCT-TCATATATTTATTGCCACTTTTACTC-TCAGTGTC-AGTTTGGAATGAGTAAAATGCGATACCATCTCCTCACGAAATTGACCTTGTTTGGGCAGCAAGTATACG-GTCATTTCTCTTTGTCAGAACTTGGAAATTTCCAAATAAAGCATTT------ACACAAGCAGAAGAAAGCAGGCCGACA---GTTCT-TTTAATTTCCTTGCTTTCCCTCTCTTAATATATGTCCACCTGACTCCGGAGCTACAGCAAATTGCAAGGACTACGCTTTGTGAAAACAGCG i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 896957 911 + 5252280 CCCAGA--GCG-------GGGACTGGCTAGACCCACCTGAA-TCCTGCAGGGCTTTGGCA--AGGCGGCAACTTCCAG---ACATTGGAC-A---------GGAGGAAGTGGGTT--------------------------------CC--TGCAGCCCAGTTGGAGGGCTGACGCTCAGACACCAGCTCAAGTTC-----------------AGGC------TTTCCCTGAAAGT-TG---------AGGAACAGAGCTGCC----TCAACTATGCATTAACATTAGCACCCATTCTGTTAATATCCATGGTCATTCTTGCAGCAGTTTGGCAGTTTAT-AAACAAC----------------------AAATTTCACCAGCG-------------------GTCTCT-CATGGACAC-TTTGAAA--TAGGCACAT---TGTCGCTGCCTGGCTCT------CTGAGTGTCAGGGAAGAGGCT-AAACATTTTGGTTCAAACAAGCATGGTGAGTGTTGATGA----AAGGG--------GA-AGTGATGATATAAGTATTG-TATTTCCTTAAAGGAGAACATAGAACCATGGATGCCAACACGCTCAC--TAAAAGATATATGAAATTATCCGTTCAGCTCTCGTCATTGGAAAACAGACAA-ACAAGAAAGAGAAGAAAGACCGGTGGGCTGTGATGAATAGCCTTATGAAAGCAAATAATATTTTGAGTGGCTTGGTACATGGCTGACATGAATTGGTGACTGTCTCTCACATTTTTGTTACTTATTTGTAAGCTAAAATGATCTGAAAATGTCT------TTCCC-TAATATGTTCATTACTAATTTTACTCTTCAGTATTAAGTTCAAAATGAGTGAAATTCTA-ACCATCTCGTCTGGAAATGGACTTTGTGTGGACAGTAAATGTAGGAGTTGTTTATCTTTTTCAGAACTTAAAAATTCCCAAATAAAATATTT------ATAGGAGCAGAAAAGAGCGAGCCCTGG---GTCCT-C------TCCCTGAGCTCCATC--------------CAAGTTACTCCAGAGCTATTGCAGATTGCAAGGACTTTACTTCGTGAAAACATCT i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89945914 928 - 120129022 TCTAGAAAGCT-------AA--TTGAGT-----------------TACTGGATCTATGTC--AAAGGATTATCTCCAC---ATATGAAAAGACACTGTCCCCAAAGGCAAG---CACCATGAGAGTG-----TTGGA-------CACCC--TGAAGCGTAGCTG----------GTCTAGCTGCCCCTTCAGACAT-----------------GTGCTGTAAATTTGCTT-----T-TTCCTCTATGCAAGGG---AACTGCCTAGATTGTCTCTT--CT--ACTCCCTGTCCATTTCATTAATCACTTTGTTTCTAATTATAG-----------TTTATGAAATAAC----------------------AGATTCTACAAGCAGAGCCAG-CTGGGCCC--AGTTTC--CATCTATGT-TTTTGAATGTGAGTGTACGCTCGTTATTCACTGCCCCTGGAGA--TGAGTG--------AAGGCTGAAG-ATGTGGGTTCAAAGA--CAGAGCTCACGTTAGTGATAGAATG----------AAAGGTGAA--TTGGAGCACGG-TGTTTT-TAAAGGGGGGAAACAGAAGCACAAGGATGGGTATGCCCCCCTAAAAGGAGAGATGAAAGCAA---TCCT-CCGTCCTCGCTGG------------GACAGGAAGA----AAAGCCAGG-AGGTTGCACTGGGTAGCCCTGCAGAGGTTGATGATTCTCCAAGTGGCAAAGCCCA-GAGTGGTATGAGCCAGTGCCAG--CTTTGTGCATTTGTAAATTATTTGTTCACCAGAGTAACCTGAAGGTATCTTTCCAAGGCAT-CA------CTATCAATATTTCACCCC-TCGACATTAAATTAAAAATGAGGGAAATTCTATACTGTC-CTTCAAGATATTGACCTCGGTTGAATAAAATGTGTAGG-GTTATTTATCTTCGTCAGAACATGGAAATTTCCGAATGAAATATTTACTAGCACAGGAAAAAAAAAAAGCGAAACCACACAGACTTT-CTTCATTCCCAGCTTCTTTTGCTCTCGGTATGTGTGTGAGATACCCTGGAGCCAGTGCAAATTACAAAAACTGTA-TTAGTTAAAACAGCT i mm10.chr12 C 0 I 1 s dasNov3.JH576208 1586575 966 + 4416731 CTTCAAAAGAGACAATGTGAATCTTTATGTATACATATTAGTTACTGTGGAGATTTGGCTAAGAGT--AAGTTTCAAAAATTTTTTAAAGAA---------GGAATGAAACCTTTAATGCATGATTGA----TTGAGTATATTATATCCAGGGCAGTATGGCAG----------GCCCCATTAAACATGCAAGCATTTATTAAAGACTTCCAAATTC------TCTGCAT-----CTTT---------AACAA---AACTATTTAGATCATTCA--------AAGTACTGGCCATTTTGTTTTTCTTTATGGTCCTTTTTGCAAGGGCTTGGCAATAAAT-AAATGACAAAACATTATACTTGAAAGCTTAAATTTTACCAGCAAGGATAGACTGGATGCATTGTTTCTAAGTGCATGCTTTTGAAATGTAAGCATGT---TATTATTCACTGGCCCTAATGACTTGAGTG--------AAGTCTGAAG-ATTTTGTTTCAAAGAAACATAATTAA-GTTGATAATACAAAGAT--------AAAAATTAT--TCTAAGTATTA-TATTT--TTAAGTGGGAAAATAGAAGTACAAATGCAAATACAATTCT-TAAAAGGATAGATGAG--TTA---TATAGTTGTCATTATTGAGAAA-----------------A----AAATCC---------------AGTACCCTCACCAATGCAAA---TATTTCAAGTGGACAGATACATAAATGATATGAATTGGTGA-----GGTAGTATATATTTTAAATATTTGTAGGAGAAAATAATCTGCAAATTTCTTTCCAAATACTGTAATGCATTTATTTCTATTTTTGCTTTTCAACATTAATTTTAAAATGAGTGAAATTCTGTACCATCTCTTCAAGAAATTGACTTTGTTTAGATAATAA---------TTATTTGTCTCTGTCAGAACTTGGAAATTTCCAAGTAAAATATTT------GCACAAGCAAAGGAAAGCAAATCCACA---GGCTTGCTTTATTCCCTTGCTGTCTCTACCTTAGAATTTGT-TAAGTTACTCTGGAGCTATTGCAAATTGCAAGGACTATATTTTGTGAAAACAACT i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1164293 3088 - 7082604 M a score=2160173.000000 s hg38.chr2_KI270774v1_alt 34242 208 + 223625 TTCCAAAGAG-CAGGGATTCATCTTTAAAATAT-GTCTCTGGAGGCACAGG-AAG-AGGC-AAGACTGATAGATTCAGAGTTGTTTGCACAAGTCAGATGTTTTTTAACCTTCTGGCAAGATAATAATGCTGAG----GG----TATAAATAACATTTATGAAGATATAATTCCATTATTTGCTGAAGGGGAAACGGTGGTTTAAAAACCTGAGTCAAAGG s panTro5.chr2A 1311783 208 + 111504155 TTCCAAAGAG-CAGGGATTCATCTTTAAAATAT-GTCTCTGGAGGCACAGG-AAG-AGGC-AAGACTGATAGATTCAGAGTTGTTTGCACAAGTCAGATGTTTTTTAACCTTCTGGAAAGATAATAATGCTGAG----GG----TATAAATAACATTTATGAAGATATAATTCCATTATTTGCTGAAGGGGAAAAGGTGGTTTAAAAACCTGAGTCAAAGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1272682 208 + 114371477 TTCCAAAGAG-CAGGGATTCATCTTTAAAATAT-GTCTCTGGAGGCACAGG-AAG-AGGC-AAGACTGATAGATTCAGAGTTGTTTGCACAAGTCAGATGTTTTTTAACCTTCTGGAAAGATAATAATGCTGAG----GG----TATAAATAACATTTATGAAGATATAATTCCATTATTTGCTGAAGGGGAAAAGGTGGTTTAAAAACCTGAGTCAAAGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1298497 208 + 1464242 TTCCAAAGAG-CAGGGATTCATCTTTAAAATAT-GTCTCTGGAGGCACAGG-AAG-AGGC-AAGACTGATAGATTCAGAGTTGTTTGCACAAGTCAGATGTTTTTTAACCTTCTGGCAAGATAATAATGCTGAG----GG----TATAAATAACATTTATGAAGATATAATTCCATTATTTGCCGAAGGGGAAAAGGTGGTTTAAAAACCTGAGTCCAAGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1029622 208 + 81552678 TTCCAAAGAG-CAGGGATTCATCTTTAAAACAT-GTCTCTGGAGGCACAGG-AAG-AGGC-AAGAGTGATGGATTCAGAGTTGTTTGCACAAGTCAGATGTTTTTTAACCTTCTGGCAAGATAATAATGCTGAG----GG----TATAAATAACATTGATGAAGATATAATTCCATTATTTGCTGAAGGGGAAAAGGTGGTTTAAAAACCTAAGTTGAAGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1364964 210 + 108979918 TTCCAAAGAGCCAGGGATTCATCTTTAAAATAT-GTCTCTGTAGGCACAGGAAAG-AGGC-AAGAGTGATAGATTCAGAGTTGTTTGCAGAAGTCAGATGTTTTTTAGCCTTCTGGCAAGATAATAATACTGAG----GG----TATAAATAGCATTTATGAAGATATGATTCCATTATTTGCTGAAGGGGAAAAGGTGGTTTAAAAACCTGAATCAAAGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1337142 210 - 111193037 TTCCAAAGAGCCAGGGATTCATCTTTAAAATAT-GTCTCTGTAGGCACAGGAAAG-AGGC-ATGAGTGATAGATTCAGAGTTGTTTGCAGAAGTCAGATGTTTTTTAGCCTTCTGGCAAGATAATAATACTGAG----GG----TATAAATAGCATTTATGAAGATATGATTCCATTATTTGCTGAAGGGGAAAAGGTGGTTTAAAAACCTGAATCAAAGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1365260 210 + 3644372 TTCCAAAGAGCCAGGGATTCATCTTTAAAATAT-GTCTCTGTAGGCACAGGAAAG-AGGC-AAGAGTGATAGATTCAGAGTTGTTTGCAGAAGTCAGATGTTTTTTAGCCTTCTGGCAAGATAATAATACTGAG----GG----TATAAATAGCATTTATGAAGATATGATTCCATTATTTGCTGAAGGGGAAAAGGTGGTTTAAAAACCTGAATCAAAGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1319054 209 - 10304083 TTCCAAAGAGACAGGAATTCATCTTTAAAATAT-GTCTCTGAAGGTACAGG-AAG-AGGC-CAGAGTGATAGATTCAGAGTTGTTTGCAGAAGTCAGATGTTCTTTAGCCTTCTGGCAAGATAATAATACTGAG----GG----TATAAATAGCATTTATAAAGATATGATTCCATTATTTGCTGAAGGGGAAAAGGTGGTTTAAAAACCTGAGTCAAAGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1390604 208 - 107702431 TTCCAAAGAGCCAGGGATTTGTCTTTAAAATGT-GTCTCTGAAGGCGCAGG-AAG-AGGC-AAGAGTGACAGATTCAGAGTTGTTTGCAGAAGTCAGATGTTCTTTAGCCTTCTGGCAAGATAATAACACTGA-----GG----TATAAATAGCATTTATGAAAATATGATTCCATTATTTGCTGAAGGGGAAAAGGTGGTTTAAAAACCTGAGTCAAAGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 868220 209 - 2200435 TTCCAAAGAGCCAGGGATTCATCTTTAAAATAT-GTCTCTGTAGGCACAGG-AAG-AGGC-CAGAGTGATAGATTCAGAGTTGTTCGCAGAAGTCAGATGTTCTTTAGCCTTCTGGCAAGATAATAATACTGAG----GG----TATAAATAGCATTTATGAAGATACGATTCCATTATTTGCTGAAGGGGAAAAGGTGGTTTAAAAACCTGAGTCAAAGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1306534 209 - 13651311 TTCCAAAGAGCCGGGGATTCATCTTTAAAATAT-GTCTCTGAAGGCACAGG-AAG-AGGC-AAGAGTGATAAATTCAGAGTTGTTTGCAGAAGTCAGATGTTTTTTGGCCTTCTGGAAAGATAATAATACTGAG----GG----TATAAATAACATTTATGAAGATATGATTCCATTATTTGCTGAAGGGGAAAAGGTGGTTTAAAAACCTGAGTCAAAGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1311190 205 - 108792865 TTCCAAAGAG-CAGGCATTCATCTTTAAAATAC-GTCTCTGGAGGCCCAGG-AAG-AGGC-AAGAGTGATAGATTCAGAGTTCTTTGCAGAAATCAGGGGCTTTTTAACCTTCTGGCAAGATAATAATGCTGAG----GGTTCATATAAATAAAATTTATGAAGTT---ATTGCATTATTTGCTGAAGGAGAAAAGGTGGTTTAAAAACATGAGTC----A i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1167382 212 - 7082604 TTCCAAAGAG-CAGGAATTCATCTTTAAAATAT-GTCTCTGGAGGCCCAGG-AAG-AGGC-AAGAGTGATAGATTCAGAGTTCTTTGCAGAAGTCAGGTACTTTTTAACCTTCTGGCAAGATAATAATGCTGAG----GGTTCCTATAAATAAAAGTTATGAAGTTATAATTGCATTATTTGCTGAAGGGGAAAAGGTGGTTTAAACACCTGAGTCAAAGA i saiBol1.JH378218 M 3088 C 0 s cebCap1.NW_016107827v1 1258937 212 + 1864846 TTCCAAAGAG-CAGGCATTCATCTTTAAAATAT-GTCTCTGGAGGCCCAAG-AAG-AGGC-AAGAGTGATAGATTCAGAGTTCTTTGCAGAAGTCAGGTGCTTTTTAACCTTCTGGCAAGATAATAATGCTGAG----TGTTCGTGTAAATAAAATTTATGAAGTTATAATTGCATTACTTGCTGAAGGGGAAAAGGTGGTTTAAACAGCCGAGTCAAAGA i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 897868 211 + 5252280 TTTCAAAGAG-CTGACATTCATCTTGAAAATGT-GTCTCTGGGGGAGCTGG-AAG-AGGCAAAAAGTGATAGATTCAGAGCCGTTTGGAAGAGTCAG-TTTTTTTTAACATCCTGGCAAAGTAATAATGCTGAGCTTTAG----TATAAATAAAATTTATGATGTTATAATTCCATTACTTGCTGAAGAGGAAAATGCGTTTTTAA-ATGTGAGCCAAAGA i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89946843 180 - 120129022 TGCCAAAGGTTCTCG--TTCATCTT-AGAATAT-GC-------------GG-AAA-CACC-CAACGTGACAGAATCAAGGTTACTTGGAGAAGTCATGTTTGTCTTAA--------AAAAAAAAAATTCCTACC----AA----TGTCAATAAAACGCATTAGTTTGTAATTCTGTTATTTACTGAAGGAGAAA-----GACTAAGGATGTGAACCAGAgg i mm10.chr12 I 1 I 2015 s dasNov3.JH576208 1587541 214 + 4416731 TTTCAAAGAG-CAGGCATTCATCTTAAAAATATAGTCTCTGGGGGGAAAAG-AAGCAGGC-AGAAGTGATAGATTCAGAGCTTTTTGGAGAAGTCAGATTTTTTTAAACATCTTGGCAAGGTAATAATGCTGAGCTTTAG----TATAAATAAAATTTATGAAGTTATAATTCCATTATTTGCTGAAGGGGAAAAGGTGGTTTAAAAATGTGAGCCAAAGA i dasNov3.JH576208 C 0 C 0 a score=1334579.000000 s hg38.chr2_KI270774v1_alt 34450 166 + 223625 A-ACA--CCAAG---------------------GAAAGTAT-----CCCAGGAGGT--------------AAATCACGGAGTAACCTGTTCACGATTACAGAG-AACACTGCC-----AAGGAAG--GTAGATCTTTGAATCTAACCCGACGAATCTGAAC-AGGTAGAAGAAAGAGGGCACTTGACCCA-A-CAACTTCCAAATAAGATTGGAGGCACA-- s panTro5.chr2A 1311991 165 + 111504155 A-ACA--CCAAG---------------------GAAAGTAT-----CCCAGGAGGT--------------AAATCACGGAATAACCTG-TCACGATTACAGAG-AACACTGCC-----AAGGAAG--GTAGATCTTTGAATCTAATCCGATGAATCTGAAC-AGGTAGAAGAAAGAGGGCACTTGACCCA-A-CAACTTCCAAATAAGATTGGAGGCACA-- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1272890 165 + 114371477 A-ACA--CCAAG---------------------GAAAGTAT-----CCCAGGAGGT--------------AAATCACGGAATAACCTG-TCACGATTACAGAG-AACACTGCC-----AAGGAAG--GTAGATCTTTGAATCTAATCCGATGAATCTGAAC-AGGTAGAAGAAAGAGGGCACTTGACCCA-A-CAACTTCCAAATAAGATTGGAGGCACA-- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1298705 165 + 1464242 A-GCA--CCAAG---------------------GAAAGTAT-----CCCAGGAGGT--------------AAATCACGGAGTAACCTG-TCACGATTACAGAG-AACACTGCC-----AAGGAAG--GTAGATCTTTGAATCTAACCCGATGAATCTGAAC-GGGTAGAAGAAAGAGGGCACTTGACCCA-A-CAACTTCCAAATAAGATTGGAGGCACA-- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1029830 165 + 81552678 A-ACA--CCAAG---------------------GAAAGTAT-----CCCAGGAGGT--------------AAACCCCGGAGTAACCTG-TCGCGATGACAGAG-AACACTGCC-----AAGGAAG--GTAGATCTTTGAATCTAACCCAATGAATCTGAAC-GGGTAGAAGAAAGAGGGCACTTGACCCA-A-CAACTTCCAAACAAGTGTGGAGGCGCA-- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1365174 165 + 108979918 A-ACA--CCAAG---------------------GAAAGCAT-----CCCAGGAGGC--------------AAATCACGGGGTACCCTG-TCACGATGACAGGG-AACACTGCC-----CAGGAAG--GTAGATCTTTGAATCTAACCCGATGAATCTGAAC-GGGTAGAAGAAAGAGGGCACTTGACACA-A-CAACTTCCAAACAAGATTGGAGGCGCA-- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1337352 165 - 111193037 A-ACA--CCAAG---------------------GAAAGCAT-----CCCAGGAGGC--------------AAATCACGGGGTACCCTG-TCACGATGACAGGG-AACACTGCC-----AAGGAAG--GTAGATCTTTGAATCTAACCCGATGAATCTGAAC-GGGTAGAAGAAAGAGGGCACTTGACACA-A-CAACTTCCAAACAAGATTGGAGGCACA-- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1365470 165 + 3644372 A-ACA--CCAAG---------------------GAAAGCAT-----CCCAGGAGGC--------------AAATCACGGGGTACCCTG-TCACGATGACAGGG-AACACTGCC-----AAGGAAG--GTAGATCTTTGAATCTAACCCGATGAATCTGAAC-GGGTAGAAGAAAGAGGGCACTTGACACA-A-CAACTTCCAAACAAGATTGGAGGCGCA-- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1319263 165 - 10304083 A-ACA--CCAAG---------------------GAAAGTAT-----CCCGGGAGGC--------------AAATCATGGAGTACCCTG-TCACGATGACAGGG-AGCACTGCC-----AAGGAAG--GTAGATCTTTGAATCTAACCCGATGAATCTGAAC-GGGTAGAAGAAAGAGGGCACTTGACACA-A-CAACTTCCAAACAAGATTGGAGGCGCA-- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1390812 165 - 107702431 A-ACA--CCAAG---------------------GAAAGTAT-----CCCAGGAGGC--------------AAATCACGGAGTACCCTG-TCACGATGACAGAG-GACACTGCC-----AAGGAAG--GTAGGTCTTTGAATCTAACCCGATGAATCTGAAC-GGGTAGAAGAAAGAGGGCACTTGACACA-A-CAACTTCCAAACAAGATTGGAGGCACA-- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 868429 165 - 2200435 A-ACA--CCAAG---------------------GAAAGTAT-----CCCGGGAGGC--------------AAATCACGGGGTACCCTG-TCACGATGACAGGG-AGCACTGCC-----AAGGAAG--GTAGATCTTTGAATCTAACCCGATGAATCTGAAC-GGGTAGAAGAAAGAGGGCACTTGACACA-A-CAACTTCCAAACAAGATTGGAGGCGCA-- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1306743 149 - 13651311 A-ACA--CCAAG---------------------GAAAGTAT-----CCCAGGAGGC--------------AAATCACGGAGTACCCTG-TCACGATGACAGAG-AACACTGCC-----AAGGAAG--GCAGATCTT--------------TGAATCTGAGC-GGGTAGAAGAA--AGGGCACTTGACACA-A-CAACTTCCAAACAAGATTGGAGGCGCA-- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1311395 165 - 108792865 A-ACAGCCAAGG---------------------GAAAGAAT-----CGCAGGAGGT--------------GAACCAAGGAGTCACCTG-TGGCAGTTACGGAG-CGCACCACG-----GAGGAAG--GCAGGTCTT-GAATCTAACCCGGTGAACCTGCAT-GGGTAGGAGAAAGA-AGAAGTTGACCCA-G-CAACTTCCAGACAAGGCTGGAGGCACA-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1167594 159 - 7082604 A-ACAGCCGAGG---------------------GAAAGAAC-----TGCAGGAGAT--------------AAACCAAGGAGTCACCTG-TAACAGTCACGGAG-AGCACTTCC-----AAGGAAG--GCA-------GAGTCTAACCTGGTGAACCTGAAT-GGGTAGAAGAAAGA-AGCGCTTGACCCA-G-CAACTTCCAAATGAGATTGGAGGCACA-- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1259149 159 + 1864846 A-AGAGCCGAGG---------------------GGAAGAAT-----CGCAGGAGGT--------------AAACCAAGAAGTCACCTG-TAACAGTCACGGAA-AGCACGGCC-----AAGGAAG--GCA-------GAATCTAACGCAGTGAGCCTCAAT-GGGTAGAAGAAAGA-AGCGCTTGACCCA-G-CAACTTCCAAACAAGATTGGAGGCACA-- i cebCap1.NW_016107827v1 C 0 I 85 s otoGar3.GL873658 898079 186 + 5252280 ACAAA--CCAAG---------------------GAGATTTTACAGCCCCAAGAAATAGTATCAGGCAAGGAAGCTACAGAGTAACCTT-TACGGATTACAG----ACACTTTT-----TAAGAGGAAGTCGATCTTTGACTCCAACCCAAAGCCTCTGAACTAGGTGGAAGAGAAAGGCCCGCTGACCCAGG-TGAATTCCAGAGCAGGCTGGAGGTGCA-- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1587755 196 + 4416731 A-ACAA-CCAAGGTGATTTTATAGCCCAAAGCAGACAGTAT-----CAGAAGTGGT--------------AAATTATAGAGTAACCTT-TAAAGGTTACAGAGAAACACTTTTTTTTAAAGGAAA--GTAGATCTT-GAATTCAACAAAATGAATCTGAACTGTATAGGAGAAGAGGAGTAGTTGACCCA-AGTAAATTCTAAACAAGATTGCAAAGGTAAA i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89947023 2015 - 120129022 I a score=328613.000000 s hg38.chr2_KI270774v1_alt 34616 54 + 223625 CGGGATGTGAACGGAGTC-----CTCTGTTCTCATCTACCCACTCGGCCGCATCCAGCC s panTro5.chr2A 1312156 54 + 111504155 CGGGATGTGAACGGAGTC-----GTCTGTTCTCATCTACCCACTCGGCCGCTTCCAGCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1273055 54 + 114371477 CGGGATGTGAACGGAGTC-----GTCTGTTCTCATCTACCCACTCGGCCGCTTCCAGCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1298870 54 + 1464242 CGGGATGTGAATGGAGCG-----CTCTGTTCTCATCTACCCACTCGGCCGCGTCCAGCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1029995 54 + 81552678 CGGGATGTGAACGGAGCC-----CTCTGTTCTCATCTACCCACTCGGCCGCGTCCAGCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1365339 54 + 108979918 CAGGGTGTGAATGGAGCC-----CTCTGTGCTCATCCGCCGACTCGGCCACATCCAGCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1337517 54 - 111193037 CAGGGTGTGAATGGAGCC-----CTCTGTGCTCATCCGCCGACTCGGCCACATCCAGCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1365635 54 + 3644372 CGGGGTGTGAATGGAGCC-----CTCTGTGCTCATCCGCCGACTCGGCCACATCCAGCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1319428 54 - 10304083 CGGGGTGTGAATGGAGCC-----CTCTGTGCTCATCCGCCGACTCGGCCACATCCAGCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1390977 54 - 107702431 CGGGGTGTGAATGGAGCC-----CTCTGTGCTCATTCGCCGACTCGGCCACATCCAGCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 868594 54 - 2200435 CGGGGTGTGAATGGAGCC-----CTCTGTGCTCATCCGCCGACTCGGCCACATCCAGCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1306892 54 - 13651311 CGGGGTGTGAATGGAGCC-----CCCTGTGCTCATCTGCCGACTTGGCCACATCCAGCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1311560 53 - 108792865 CGGGGTGTGAACGGAGCA-----GTCCGCTCTCATCTTCAGGCTCAG-CGCATCCAGCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1167753 52 - 7082604 -GGGGTGTGAACGGAGCA-----GTCCGCTCTCATCTGCAGACTCAT-TGCGTCCAGCC i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 898265 11 + 5252280 -----------------------------------------CCTCGGCC-------GTC i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1587951 55 + 4416731 ----CTGTGTATATTACCAGTTACTTTGTTCACATATATGAATCTGTCTTCATCCACCC i dasNov3.JH576208 C 0 I 7188 e mm10.chr12 89947023 2015 - 120129022 I e cebCap1.NW_016107827v1 1259308 85 + 1864846 I a score=165454.000000 s hg38.chr2_KI270774v1_alt 34670 28 + 223625 GGGCTCAACAGCCTGGGTTTGTTTCTCT s panTro5.chr2A 1312210 28 + 111504155 AGGCTCAACAGCCTGGGTTTGTTTCTCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1273109 28 + 114371477 AGGCTCAACAGCCTGGGTTTGTTTCTCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1298924 28 + 1464242 GGGCTCAACAGCCTGGGTTTGTTTCTCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1030049 28 + 81552678 GAGCTCCACAGCCTGGGTTTGTTTCTCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1365393 28 + 108979918 GGGCTCAACAGCCTGGATTTGTTTCTCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1337571 28 - 111193037 GGGCTCAACAGCCTGGATTTGTTTCTCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1365689 28 + 3644372 GGGCTCAACAGCCTGGATTTGTTTCTCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1319482 28 - 10304083 GGGCTCAAGAGCCTGGATTTGTTTCTCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1391031 27 - 107702431 GGGCTCAACAGCCTGG-TTTGTTTCTCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 868648 28 - 2200435 GGGCTCAACAGCCTGGATTTGTTTCTCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1306946 27 - 13651311 GGGCTCAGCAGGCTGG-TTTGTTTCTCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1311613 18 - 108792865 TGGCTCAGCAGCCTGGGT---------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1167805 18 - 7082604 TGGCTCCGTGGCCTGGGT---------- i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 898276 27 + 5252280 GGGCAGGGTCGCCTGG-CCCGTTTCTTT i otoGar3.GL873658 C 0 C 0 e mm10.chr12 89947023 2015 - 120129022 I e cebCap1.NW_016107827v1 1259308 85 + 1864846 I e dasNov3.JH576208 1588006 7188 + 4416731 I a score=202974.000000 s hg38.chr2_KI270774v1_alt 34698 39 + 223625 GTCACCAGTTGTTTCTGCCATTCTGGGGGAAAAGCACCT s panTro5.chr2A 1312238 39 + 111504155 GTCACCAGTCGTTTCTGCCATTCTGGGGGAAAAGCACCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1273137 39 + 114371477 GTCACCAGTTGTTTCTGCCATTCTGGGGGAAAAGCACCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1298952 39 + 1464242 CTCACCAGCTGTTTCTGCTATTCTGGGGGAAAAGCACCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1030077 39 + 81552678 CTCATCAGCTGTTTCTGCCATTCTGGGGGGAAAGCACCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1365421 38 + 108979918 CTCACCAGCTGTTTCTGCCATTCT-GGGGAAAAGCACCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1337599 38 - 111193037 CTCACCAGCTGTTTCTGCCATTCT-GGGGAAAAGCACCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1365717 38 + 3644372 CTCACCAGCTGTTTCTGCCATTCT-GGGGAAAAGCACCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1319510 38 - 10304083 CTCACCAGCTGTTTCTGCCATTCT-GGGGAAAAGCACCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1391058 38 - 107702431 CTCACCAGCTGTTTCTGCCATTCT-GGGAAAAAGCACTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 868676 38 - 2200435 CTCACCAGCTGCTTCTGCCATTCT-GGGGAAAAGCACCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1306973 37 - 13651311 CTCACCAGCTGTTTCTGCCATTCT-GGGGAAAA-CACCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1311631 17 - 108792865 --------CTGTTTCCGCCATTCT-G------------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1167823 17 - 7082604 --------GTGTTTCCGCCATCCT-G------------- i saiBol1.JH378218 C 0 C 0 e mm10.chr12 89947023 2015 - 120129022 I e cebCap1.NW_016107827v1 1259308 85 + 1864846 I e otoGar3.GL873658 898303 0 + 5252280 C e dasNov3.JH576208 1588006 7188 + 4416731 I a score=694048.000000 s hg38.chr2_KI270774v1_alt 34737 104 + 223625 G-CTCATTTACACTGTTTACCATTGAAGCCTTCATCCCACTGCTCTGAAGTGTCTCTGACCTGGTTGTTCCAGGAACGCCAACCCCCATGGTGGAGAATGCTCAC s panTro5.chr2A 1312277 104 + 111504155 G-CTCATTTACACTGTTTACCATTGAAGCCTTCATCCCACTGCTCTGAAGTGTCTCTGACCTGGTTGTTCCAGGAACGCCAGCCCCCATGGTGGAGAATGCTCAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1273176 104 + 114371477 G-CTCATTTACACTGTTTACCATTGAAGCCTTCATCCCACTGCTCTGAAGTGTCTCTGACCTGGTTGTTCCAGGAACGCCAGCCCCCATGGTGGAGAATGCTCAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1298991 104 + 1464242 G-CTCATTTACACTGTTTACCATTGAAGCCTTCATCCCACTGCTCTGAAGTGTCTCTGACCTGGTTGTTCCAGGAACGCCAGCCCCCATGGTGGAGAATGCTCAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1030116 102 + 81552678 G-CTCATTTACACTGTTTGCCGTTGAAGCCTTCATCCTACTGCTCTGAAGTGTCTCTGACCTGGTTGTTCCAGGAACGCCAGCCCCTATGGTG--GAATGCTCGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1365459 94 + 108979918 GCCTCA---------TTTACTGTTGAAGCCTTCATCCCACTGCTCTGAAGTGTCTCTGACATGGTTGTTCTAGGAACGCCAGCTCCCATGGTG--GAATGCTCGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1337637 94 - 111193037 GCCTCA---------TTTACTGTTGAAGCCTTCATCCCACTGCTCTGAAGTGTCTCTGACATGGTTGTTCTAGGAACGCCAGCTCCCATGGTG--GAATGCTCGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1365755 94 + 3644372 GCCTCA---------TTTACTGTTGAAGCCTTCATCCCACTGCTCTGAAGTGTCTCTGACATGGTTGTTCTAGGAATGCCAGCTCCCATGGTG--GAATGCTCAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1319548 101 - 10304083 GCCTCATTTACA--GTTTACTGTTGAAGCCTTCATCCCACTGCTCTGAAGTGTCTCTGACATGGTTGTTCCAGGAACGCCAGCCCCCATGGTG--GAATGCTCGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1391096 101 - 107702431 GCCTCATTTACA--GTTTACTGTTGAAGCCTTCATCCCACTGCTCTGAAGTGTCTCTGACCTGGTTGTTCCAGAAACACCAGCCCCCATGGTG--GAATGTTCGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 868714 101 - 2200435 GCCTCATTTACA--GTTTACTGTTGAAGCCTTCATCCCACTGCTCTGAAGTGTCTCTGACATGGTTGTTCTAGGAACGCCAGCTCCCATGGTG--GAATGCTCGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1307010 101 - 13651311 GCCTTGTTTACA--GTTTACTGTTGAAGCCTTCATCCCACTGCTCTGAAGTGTCTCTGACCTGGTTGTTCCAGGAACGCCAGCCCCCATGGTG--GAATGCTTGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1311648 102 - 108792865 -CCTCATTTACACTGTTTACCCTGGCAGCCTTCATCCCACTGCTCTGGGGTGTCTCTGACCTGGTTGTTCCCAGAATGCCAGCCCCAGTGGTG--GGATGCTCGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1167840 82 - 7082604 -CCTCATTCACACCGTTCACCGTGGCAGCCTGCATCCCACTGCTCTGGGGCATCTCTGACCTGGTTGTTCCCGGAACACCA----------------------GC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1259393 82 + 1864846 -CCTCATTCACACTGTCTACCGTGGCAGCCTGCATCCCACTGCCCTGGGGCGTCTCTGACCTGGCTGTTCCCAGAACGCCA----------------------GC i cebCap1.NW_016107827v1 I 85 C 0 e mm10.chr12 89947023 2015 - 120129022 I e otoGar3.GL873658 898303 0 + 5252280 C e dasNov3.JH576208 1588006 7188 + 4416731 I a score=409159.000000 s hg38.chr2_KI270774v1_alt 34841 45 + 223625 CCCACCCTCTCTGCCAGCCCACGAGGCGCTTTCCTCCTCATTGAC s panTro5.chr2A 1312381 45 + 111504155 CCCACCCTCTCTGCCAGCCCACGAGGCGCTTTCCTCCTCATTGAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1273280 45 + 114371477 CCCACCCTCTCTGCCAGCCCACGAGGTGCTTTCCTCCTCATTGAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1299095 45 + 1464242 CCCACCCTCTCTGCCAGCCCACAAGGCGCTTTCCTCCTCATTGAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1030218 45 + 81552678 CCCACCCTCTCTGCCAGCCCATGAGGCAGCTTCCTCCTCACTGAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1365553 45 + 108979918 CCCACCCTCTCTGCCAGCCCACGAGGCGCTTTCCTCCTCACTGAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1337731 45 - 111193037 CCCACCCTCTCTGCCAGCCCACGAGGCGCTTTCCTCCTCACTGAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1365849 45 + 3644372 CCCACCCTCTCTGCCAGCCCACGAGGCGCTTTCCTCCTCACTGAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1319649 45 - 10304083 CCCACCCTCTCTGTCAGCCCACGAGGTGCTTTCTTCCTCACCGAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1391197 45 - 107702431 CCCACCCTCTCTGCCAGCCCACGAAGCACTTTCCTCCTCACCGAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 868815 45 - 2200435 CCCACCCTCTCTGCCAGCCCACGAGGCGCTTTCCTCCTCACCGAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1307111 45 - 13651311 CCCACCCTCTCTGCCAGCCCACGAGGCGCTTTCCTCCTCACCGAC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1311750 45 - 108792865 CCCACCCTCTCTGCCAGCCCACATGGCCCTTTCCTCCTCACTGAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1167922 45 - 7082604 CCCACCCTCTCTGCCAGCCCACGTGGCCCTTTCCTCCTCACTGAC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1259475 45 + 1864846 CCCACCCTCTCTGCCAGCCCATGTGGCCCTTTCCTCCTCACTGAC i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 898303 28 + 5252280 CCCTCCCTCCTTGC-----------------TGCTGTGCATTGCT i otoGar3.GL873658 C 0 C 0 e mm10.chr12 89947023 2015 - 120129022 I e dasNov3.JH576208 1588006 7188 + 4416731 I a score=563687.000000 s hg38.chr2_KI270774v1_alt 34886 75 + 223625 CTGCCCTCTGGCATGCCCTCACCCTCCCT---GGACTCTTGCAGCCCCTCCTGAGGGAAAGTCCTGTACTCAGTCTTT s panTro5.chr2A 1312426 75 + 111504155 CTGCCCTCTGGCATGCCCTCACCCTCCCT---GGACTCCTGCAGCCCCTCCTGAGGGAAAGTCCTGCACTCAGTCTTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1273325 75 + 114371477 CTGCCCTCTGGCATGCCCTCACCCTCCCT---GGACTCCTGCAGCCCCTCCTGAGGGAAAGTCCTGTACTCAGTCTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1299140 75 + 1464242 TTGCCCTCTGGCATGCCCTCACCCTCCCT---GGACTCCTGCAGCCCCTCCTGAGGGAAAGTCCTGTACTCAGTCTTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1030263 75 + 81552678 CTGCCCTCTGGCATGCCCTCACCCTCCCT---GGACTCCTGCAGCCCCTCCTGAGGGAAAGTCCTGTACTCACTCTTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1365598 75 + 108979918 CTGCCCTCTGACATGCCCTCACCCTTCCT---GGACACCTGCAGCCCCTCCTGAGGGAAAGTCCTGTCCTCAGTCTTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1337776 75 - 111193037 CTGCCCTCTGACATGCCCTCACCCTTCCT---GGACACCTGCAGCCCCTCCTGAGGGAAAGTCCTGTCCTCAGTCTTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1365894 75 + 3644372 CTGCCCTCTGACATGCCCTCACCCTTCCT---GGACACCTGCAGCCCCTCCTGAGGGAAAGTCCTGTCCTCAGTCTTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1319694 75 - 10304083 CTGCCCTCTGACATGCCCTCACCCTTTCT---GGACACCTGCAGCCCCTCCTGAGGGAAAGTCCTGTCCTCAGTCTTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1391242 75 - 107702431 CTGCCCTCTGACATGCCCTCACCCTTCCT---GGACACCTGCAGCCCCTCCTGAGGGAAAGTCCTGTCCTCAGTCTTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 868860 75 - 2200435 CTGCCCTCTGACATGCCCTCACCCTTCCT---GGACACCTGCAGCCCCTCCTGAGGGAAAGTCCTGTCCTCAGTCTTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1307156 75 - 13651311 CTGCCCTCTGACATGCCCTCACCCTTCCT---GGACACCTGCAGCCCCTCCTGAGGGAAAGTCCTGTACTCAGTCTTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1311795 64 - 108792865 CTGCCCTC------ACTGTC-----TCCT---GGACTCCTGCAGCCCCTCCCAAGGGAAACTCCTGCACTCAGTCTTT i calJac3.chr14 C 0 I 297 s saiBol1.JH378218 1167967 46 - 7082604 CTGCCCTC------ACTGTC-----CCCT---GGACTCCTGCAGCCCCCTC-----------CCTGCACCC------- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1259520 52 + 1864846 CTGCCCTC------ACCATC-----TCCT---GGACTCCTGCAGCCCCTC------------CCTGCACTCCGTCTTT i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 898331 73 + 5252280 CTGCCCCTGCTCAAGCTCTCACACTCCTT---TGGACCCTCTGTGCTCTACTCAAGGCA--TCCTCCTCTCACTGTCT i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89949038 76 - 120129022 CTACCCTCACTCAAGCCCTCATCTTTTCTCACAGATTCTTGT--CCTTTCCTGAAAGGAATTTCTTTCTATAGGCCTT i mm10.chr12 I 2015 C 0 e dasNov3.JH576208 1588006 7188 + 4416731 I a score=10035.000000 s hg38.chr2_KI270774v1_alt 34961 1 + 223625 C s panTro5.chr2A 1312501 1 + 111504155 C i panTro5.chr2A C 0 I 117 s panPan2.chr2A 1273400 1 + 114371477 C i panPan2.chr2A C 0 I 117 s gorGor5.CYUI01015607v1 1299215 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1030338 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1365673 1 + 108979918 C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1337851 1 - 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1365969 1 + 3644372 C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1319769 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1391317 1 - 107702431 T i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 868935 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1307231 1 - 13651311 C i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1312156 1 - 108792865 C i calJac3.chr14 I 297 C 0 s cebCap1.NW_016107827v1 1259572 1 + 1864846 C i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 898404 1 + 5252280 C i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89949114 1 - 120129022 C i mm10.chr12 C 0 C 0 e saiBol1.JH378218 1168013 0 - 7082604 C e dasNov3.JH576208 1588006 7188 + 4416731 I a score=2017740.000000 s hg38.chr2_KI270774v1_alt 34962 256 + 223625 CCTCATGTCTCATGATGGACAGCTGTCCTCACCCCATGGACATGGTTCGGTGTCT------------------------TCCA------GCTGACCTGGAGGTCCCTGGCCCTGCAGAGTGGTACCA----GCAGAGT--------------------------------------------------CCCCTCTCTGACAGT--CCCTGCACA-GCCCCACAGGG-TGACCATC-GCTTTCTAA----CTCACTACACTCGTGCCTT--------GGTTCCTGCCTTTTTCTGGAACCTCT--TCCACCCACACC-ATGCCCAACTGTAAAAATCATT-TACT-CCTCCAAGGTGCAATGA--- s panTro5.chr2A 1312619 257 + 111504155 CCTCATGTCTCATGATGGACAGCTGTCCTCACCCCATGGACATGGTTCGGTGTCT------------------------CCCA------GCTGACCTGGAGGTCCCTGGCCCTGCAGAGTGGTACCA----GCAGAGT--------------------------------------------------CCCCTCTCTGACAGT--CCCTGCACA-GCCCCACAGGGGTGACCATC-GCTTTCTAA----CTCACTACACTCGTGCCTC--------GGTTCCTGCCTTTTTCTGGAACCTCT--TCCACCCACACC-ATGCCCAACTGTAAAAATCATT-TACT-CCTCCAAGGTGCAATGA--- i panTro5.chr2A I 117 C 0 s panPan2.chr2A 1273518 257 + 114371477 CCTCATGTCTCATGATGGACAGCTGTCCTCACCCCATGGACATGGTTCGGTGTCT------------------------CCCA------GCTGACCTGGAGGTCCCTGGCCCTGCAGAGTGGTACCA----GCAGAGT--------------------------------------------------CCCCTCTCTGACAGT--CCCTGCACA-GCCCCACAGGGGTGACCATC-GCTTTCTAA----CTCACTACACTCGTGCCTC--------GGTTCCTGCCTTTTTCTGGAACCTCT--TCCACCCACACC-ATGCCCAACTGTAAAAATCATT-TACT-CCTCCAAGGTGCAATGA--- i panPan2.chr2A I 117 C 0 s gorGor5.CYUI01015607v1 1299216 256 + 1464242 CCTCATGTCTCATGATGGACAGCTGTCCTCACCCCATGGACATGGTTCAGTGTCT------------------------CCCA------GCTGACCTGGAGGTCCCTGGCCCTGCAGAGTGGTACCA----GCAGAGT--------------------------------------------------CCCCTCTCTGACAGT--CCCTGCACA-GCCCCACAGGG-TGACCATC-GCTTTCTAA----CTCACTACACTCGTGCCTC--------GGTTCCTGCCTTTTTCTGGAACCTCT--TCCACCCACACC-ATGCCCAACTGTAAAAATCATT-TACT-CCTCCAAGGTGCAATGA--- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1030339 235 + 81552678 CCTCATGTCTCAGGATGGACAGCTGTCCTCACCCCATAGACACGATTTGGTGTTT------------------------CCCA------GCCGACCGGGAGATCCCTGGCCCTGCAGAGTGGTACCA----GCAG-------------------------------------------------------------------------TGCACA-GCCCCACAGGG-TGACCATT-GCTTTCTAA----CTCACTACACTCGTGCCTC--------GGTTCCTGCCTTCTTCTGGAACCTCC--TCCACCCACACC-ATGCCTAACTGTAAAAATCATT-TACT-CCTCCAAGGTGCAATGA--- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1365674 256 + 108979918 CCTCCTGTCTCATGATGGACAGCTGTCCTCACCCCACAGACATGATTCGGTGTCT------------------------CCCA------GTCGACTGGGAGGTCCCTGGCCCTGCAGAGGAGTACCG----GCAGAGT--------------------------------------------------CCCCTCTCTGACAGT--CCCTGCACA-GCCCCACAGGG-CAACCATC-ACTTTCTAA----TTCACCACACTCGTGCCTC--------GGTTCCTGCCTTCTTCTGGAACCTCA--TCCACCCACACC-ATGCCCAGCTGTAAAAATCATT-CATT-CCCCCAGGGTACAATGA--- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1337852 256 - 111193037 CCTCCTGTCTCATGATGGACAGCTGTCCTCACCCCACAGACATGATTCGGTGTCT------------------------CCCA------GTCGACTGGGAGGTCCCTGGCCCTGCCGAGGAGTACCG----GCAGAGT--------------------------------------------------CCCCTCTCTGACAGT--CCCTGCACA-GCCCCACAGGG-CAACCATC-ACTTTCTAA----TTCACCACACTCGTGCCTC--------GGTTCCTGCCTTCTTCTGGAACCTCA--TCCACCCACACC-ATGCCCAGCTGTAAAAATCATT-CATT-CCCCCAGGGTACAATGA--- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1365970 256 + 3644372 CCTCCTGTCTCATGATGGACAGCTGTCCTCACCCCACAGACATGATTCGGTGTCT------------------------CCCA------GTCGACTGGGAGGTCCCTGGCCCTGCAGAGGAGTACCG----GCAGAGT--------------------------------------------------CCCCTCTCTGACAGT--CCCTGCACA-GCCCCACAGGG-CAACCATC-ACTTTCTAA----TTCACCACACTCGTGCCTC--------GGTTCCTGCCTTCTTCTGGAACCTCA--TCCACCCACACC-GTGCCCAGCTGTAAAAGTCATT-CATT-CCCCCAGGGTACAATGA--- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1319770 256 - 10304083 CCTCCTGTCTCATGATGGACAGCTGTCCTCACCCCACAGACATGATTCGGTGTCT------------------------CCCA------GTCGACTGGGAGGTCCCTGGCCCTGCAGAGGAGTACCG----GCAGAGT--------------------------------------------------CCCCTCTCTGACAGT--CCCTGCACA-GCCCCACAGGG-CAACCATC-ACTTTCTAA----TTCACCACACTCGTGCCTC--------GGTTCCTGCCTTTTTCTGGAACCTCC--TCCACCCACACC-ATGCCCAGCTGTAAAAATCATT-CATT-CCCCCAGGATGCAATGA--- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1391318 229 - 107702431 CCTCCTGTCTCATGATGGACAGCTGTCCTCACCCCATAGACATGATTCGGCGTCT------------------------CCCA------GTCGACTGGGAGGTCCCTGGCCCTGCAGAGGAGCACCA----GCAGAGT--------------------------------------------------CCCCTC------------------------------GG-CAACCATC-ACTTTCTAA----TTCACCACACTCGTGCCTG--------GGTTCCTGCCTTCTTCTGGAACCTCC--TCCACCCACACC-ATGCCCAGCTGTAAAAATCATT-CATT-CCCCCAGGGTGCAATGA--- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 868936 256 - 2200435 CCTCCTGTCTCATGATGGACAGCTGTCCTCACCCCACAGACATGATTCGGTGTCT------------------------CCCA------GTCGACTGGGAGGTCCCTGGCCCTGCAGAGGAGTACCG----GCAGAGT--------------------------------------------------CCCCTCTCTGACAGT--CCCTGCACA-GCCCCACAGGG-CAACCATC-ACTTTCTAA----TTCACCACACTCGTGCCTT--------GGTTCCTGCCTTTTTCTGGAACCTCC--TCCACTCACACC-ATGCCCAGCTGTAAAAATCATT-CATT-CCCCCAGGGTACAATGA--- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1307232 256 - 13651311 CCTCCTGTCTCATGATGGACAGCTGTACTCACCCCACAGACATGACTCGGTGTCT------------------------CCCA------GTCGACTGGGAGGTCCCTGGCCCTGCAGAGGAGTACCA----GCAGAGT--------------------------------------------------CCACTCTCTGACAGT--CCCTGCACA-GCCCCACAGGG-CAACCATC-ACTTTCTAA----TTCACCACACTCGTGCCTC--------GGTTCCTGCCTTTTTCTGGAACCTCC--TCCACCCACACC-GTGCCCAACGGTAAAAATCATT-TACT-CCCCCAGGGTGCAATGA--- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1312157 257 - 108792865 CCTCCTGTCCCATGCTGGGCAGCCGTCCTCAACCCACAGACATGA-TGGGTGTCT------------------------CCCA------GGGAGCCAGGAGGT-CCTGGCCCTGCAGAGTGGCACTG----GCAGAGT--------------------------------------------------CCCCTCTCTGACAGT--CTCTGCACACCCCCCACAGGG-CTACCATG-GCTTTCCAA----TTCACTACACTCCTGCCTC--------AGTTCCTGTCTTTTCCTGGAACCTCC--TCCACCCCCACC-ATGCCCTACTGTAAAAATCATTATACTGCCTCCAAAGTGCAATGA--- i calJac3.chr14 C 0 I 1115 s saiBol1.JH378218 1168013 248 - 7082604 ---CGTGTC---TGCTGGGCAGCCGTGCTCACCCCACAGACATGA-TGGGTGTCT------------------------CCCA------GCCAGCCGGGCGGT-CCTGGCCCTGCAGAGTGGCACTG----GCAGAGT--------------------------------------------------CCCCTCTCTGACCGT--CTCTGCACA-CCCCCACAGGG-CTTCCATG-GCTTTCCAA----CTCACTACACTCCTGCCTC--------AGTTCCTGCCTCTTTCTGGAACCTCC--TCCACCCCCACC-ATGCCCTACTGTAAAAATCATT-TATT-CCTCCAAGGTGCAATGA--- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1259573 242 + 1864846 CCTCCTGTCTCATGCTGGGCAGCCGTCCTCACCCCACAGACATGA-TGGGTGTCT------------------------CCCA------GCCAGCTGGGAGGT-CCTGGCCCTGTAGAGTGGCACTG----GCAGAGT--------------------------------------------------CCCCTCTCTGACCGT--CTCTGCACA-CCCCCACAGGG-CTTCCATG-GCTTTGCAA----CTCACTACACTCCTGC--------------------CTTTTTCTGGAACCTCC--TCCACCCCCACT-ATGCCCTACTGTAAAAATCATT-TATT-CCTCCAAGGTGCAATGA--- i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 898405 266 + 5252280 -------TCCC-----------CCGTCCTTGTCCC-TAGACATGATTCTGTGTCTGAAAGGTCCAGGGCTCAGGGAGCACCCA------CTGCTCTGGGCAGTAGCCTGGCTTGCCTGGCACCACCGCCCAGCATAGT--------------------------------------------------CCCCTGCCTGAC---------------TTCCTGGTGGC-TGCCTCCA-GCCTTCTGAACCTATCGCCATGCTCTTGTTTCTATGGCCTGGGTCCTGCCATTTCCTGGAGCATCCAGTGTGCCCACCCC--TGCCTAGCTGTAAAAATCCAT-TAGT-GGCCCAAGGGACAATGC--- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89949115 305 - 120129022 TTTTCTCTCTCATTCTGT-CTCATGTCCTTACCCCACAGACATGTCTC--TGCCT------------------------CCTACACACCCTCCATCCATAGCTCCCTGTACTTCCTGAGGGCTGTCC----TTAGAGTGGTGTTTGTGCTGTCTTGTGTAAGGATCTCTCAGAACCTATTCTGCATAGCTTCTCCCTAATGATACCCATGCACA-GGCCCATAGAT---ACCATCTGCTTTTTGC----TT--------TTGGTCCTT--------AGTTCCTGCCCTTTTATGGAATGTT---TCCACCCCCACCCCTGCACAAATGCAAAAAAAAAT-GCGT-TATTCGAGGATTGATACACA i mm10.chr12 C 0 C 0 e dasNov3.JH576208 1588006 7188 + 4416731 I a score=983400.000000 s hg38.chr2_KI270774v1_alt 35218 123 + 223625 AAATGACGAGTTGCAACCAAAGCC-ATCT---TCTGCTCAATCCTCCTGGCACCTTTAGCT----TCCTGACTGTGTTTGGGGTACCGG-----CCTCTCCTCTCCT-CCCCTCTGCTCCTTTCAAATGGGATGCCA s panTro5.chr2A 1312876 123 + 111504155 AAATGACAAGTTGCAACCAAAGCC-ATCT---TCTGCTCAATCCTCCTGGCACCTTTAGCT----TCCTGACTGTGTTTGGGGTACCGG-----CCTCTCCTCTCCT-CCCCTCTGCTCCTTTCAAATGGGATGCCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1273775 123 + 114371477 AAATGACAAGTTGCAACCAAAGCC-ATCT---TCTGCTCAATCCTCCTGGCACCTTTAGCT----TCCTGACTGTGTTTGGGGTACCGG-----CCTCTCCTCTCCT-CCCCTCTGCTCCTTTCAAATGGGATGCCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1299472 123 + 1464242 AAATGACAAGTTGCAACCAAAGCC-ATCT---TCTGCTCAATCCTCCTGGCACCTTTAGCT----TCCTGACTGTGTTTGGGGTACCGG-----CCTCTCCTCTCCT-CCCCTCTGCTCCTTTCAAATGGGATGCCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1030574 123 + 81552678 AAATGACAAGTTACAACCAAAGCC-ATCT---TCTGCTCAATCCTCCTGGCACCTTTAGCT----TCCTGACTGTGTTTGGGGTACCTG-----CCTCTCCTCTCCT-CCCCTCTGCTCCTTTCAACTGGGATGCCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1365930 123 + 108979918 AAATGACAAGTTACAACCAAAGCC-GTCT---TCTGTTCAATCCTCCTGGCACCTTTAGCT----TCCCGACTGTGTTTGGGGTGCCAG-----CCTCTCCTCTCCT-CCCCTCTCCTCCTTTCAACTGGGATGCCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1338108 128 - 111193037 AAATGACAAGTTACAACCAAAGCC-GTCT---TCTGTTCAATCCTCCTGGCACCTTTAGCT----TCCCGACTGTGTTTGGGGTGCCAGcctctcctctcctctcct-cccctctcctccTTTCAACTGGGATGCCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1366226 123 + 3644372 AAATGACAAGTTACAACCAAAGCC-GTCT---TCTGTTCAATCCTCCTGGCACCTTTAGCT----TCCCGACTGTGTTTGGGGTGCCAG-----CCTCTCCTCTCCT-CCCCTCTCCTCCTTTCAACTGGGATGCCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1320026 123 - 10304083 AAATGACAAGTTACAACCAAAGCC-GTCT---TCTGTTCAATCCTCCTGGCACCTTTAGCT----TCCCAACTGTGTTTGGGGTGCCAG-----CCTCTCCTCTCCT-CCCCTCTACTCCTTTCAACTGGGCTGCCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1391547 127 - 107702431 AAATGACAAGTTACAACCAAAGCCAATCTCAATCTGTTCAATCCTCCTGGCACCTTTAGCT----TCCCGACTGTGTTTGGGGTGCCAG-----CCTCTCCTCTCCT-CCCCTCTGCTCCTTTCAACTGGGATGCCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 869192 115 - 2200435 AAATGACAAGTTACAACCAAAGCC-GTCT---TCTGTTCAATCCTCCTGGCACCTTTAGCT----TCCCGACTGTGTTTGGGGTGCCAG-----CCT--------CT-CCCCTCTGCTCCTTTCAACTGGGATGCCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1307488 123 - 13651311 AAATGACAAGTTACAACCAAAGCC-GTCT---TCTGTTCAATCCTCCTGGCACCTTTAGCT----TCCCGACTGTGTTTGGGGTGCCAG-----CCTGTCCTCTCCT-CCCCTCTGCTCCTTTCAACTGGGATGCCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1313529 119 - 108792865 AAACGACAAGTTACAACCAAAGCC-A-TC---TTTGCTCAATCCTCCTGGCACATTTACTT-----TCTGACTA-GTTTGAGGTGCAGG------CTATCCTCTGCTCCCCCTCTGCTCCTTTCAGCT-GGATGCCA i calJac3.chr14 I 1115 C 0 s saiBol1.JH378218 1168261 121 - 7082604 AAACGACAAGTTACAACCAAAGCC-A-CT---TCTGCTCAATCCTCCTGGCACCATTACCT----GCCTGACTG-GTTTGGGGTGCAGG-----CCTCTCCTCTGCT-CCCCTCTGCTCCTTTCAGCTGGGATGCCA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1259815 122 + 1864846 AAATGACAAGTTACAACCAAAGCC-GTCT---TCTGCTCAGTCCTCCTGGCACCATTATCT----TCCTGACTG-GTTTGGGGTGCAGG-----CCTCTCCTCTGCT-CTCCTCTGCTCCTTTCAGCTGGGATGCCA i cebCap1.NW_016107827v1 C 0 I 166 s otoGar3.GL873658 898671 66 + 5252280 AAAATCCAAGTTACAGTCAAAGT--GTCT---TCTGGTCAGC--------------------------------TGCTTAGAGTGTTCA-----CCT--------CT---------------------GGGACACTA i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89949420 106 - 120129022 AGGGAAGAAGGTACCTTCAAAATT-ACCT---TCTCTTCCATACACCATACTCCATTCCTTGATACCATTACTATG---GGGTTACTGG-----CCA----TGTTCT-TCC--------------AGTTTGATGGCA i mm10.chr12 C 0 C 0 e dasNov3.JH576208 1588006 7188 + 4416731 I a score=64290.000000 s hg38.chr2_KI270774v1_alt 35341 7 + 223625 GCCCCTC s panTro5.chr2A 1312999 7 + 111504155 GCCCCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1273898 7 + 114371477 GCCCCTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1299595 7 + 1464242 GCCCCTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1030697 7 + 81552678 GCCCCTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1366053 7 + 108979918 GCCCCTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1338236 7 - 111193037 GCCCCTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1366349 7 + 3644372 GCCCCTC i macNem1.NW_012011978v1 C 0 I 191 s cerAty1.NW_012000820v1 1320149 7 - 10304083 GCCCCTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1391674 7 - 107702431 GCCCCTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 869307 7 - 2200435 GCCCCTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1307611 7 - 13651311 GCCCCTC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1313648 6 - 108792865 G-CCCTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1168382 7 - 7082604 GCCCCTC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1260103 7 + 1864846 GCCCCTC i cebCap1.NW_016107827v1 I 166 C 0 s mm10.chr12 89949526 7 - 120129022 GCTGGTT i mm10.chr12 C 0 C 0 e otoGar3.GL873658 898737 0 + 5252280 C e dasNov3.JH576208 1588006 7188 + 4416731 I a score=25532.000000 s hg38.chr2_KI270774v1_alt 35348 5 + 223625 TGCCT- s panTro5.chr2A 1313006 4 + 111504155 TGCC-- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1273905 4 + 114371477 TGCC-- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1299602 5 + 1464242 TGCCT- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1030704 4 + 81552678 TGCC-- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1366060 4 + 108979918 TGCC-- i rheMac8.chr13 C 0 I 2 s macFas5.chr13 1338243 4 - 111193037 TGCC-- i macFas5.chr13 C 0 I 2 s macNem1.NW_012011978v1 1366547 4 + 3644372 TGCC-- i macNem1.NW_012011978v1 I 191 I 2 s cerAty1.NW_012000820v1 1320156 4 - 10304083 TGCC-- i cerAty1.NW_012000820v1 C 0 I 423 s chlSab2.chr14 1391681 4 - 107702431 TGCC-- i chlSab2.chr14 C 0 I 146 s manLeu1.NW_012103754v1 869314 4 - 2200435 TGCC-- i manLeu1.NW_012103754v1 C 0 I 2 s colAng1.NW_012118821v1 1307618 4 - 13651311 TGCC-- i colAng1.NW_012118821v1 C 0 I 2 s calJac3.chr14 1313654 4 - 108792865 TGCC-- i calJac3.chr14 C 0 I 1 s saiBol1.JH378218 1168389 4 - 7082604 TGCC-- i saiBol1.JH378218 C 0 I 1 s cebCap1.NW_016107827v1 1260110 4 + 1864846 TGCC-- i cebCap1.NW_016107827v1 C 0 I 1 s otoGar3.GL873658 898737 2 + 5252280 --TC-- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89949533 5 - 120129022 TGTC-T i mm10.chr12 C 0 I 73 e dasNov3.JH576208 1588006 7188 + 4416731 I a score=100.000000 s hg38.chr2_KI270774v1_alt 35353 1 + 223625 C s gorGor5.CYUI01015607v1 1299607 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 e mm10.chr12 89949538 73 - 120129022 I e saiBol1.JH378218 1168393 1 - 7082604 I e cebCap1.NW_016107827v1 1260114 1 + 1864846 I e otoGar3.GL873658 898739 0 + 5252280 C e dasNov3.JH576208 1588006 7188 + 4416731 I e calJac3.chr14 1313658 1 - 108792865 I e colAng1.NW_012118821v1 1307622 2 - 13651311 I e manLeu1.NW_012103754v1 869318 2 - 2200435 I e chlSab2.chr14 1391685 146 - 107702431 I e cerAty1.NW_012000820v1 1320160 423 - 10304083 I e macNem1.NW_012011978v1 1366551 2 + 3644372 I e macFas5.chr13 1338247 2 - 111193037 I e rheMac8.chr13 1366064 2 + 108979918 I e nomLeu3.chr19 1030708 0 + 81552678 C e panPan2.chr2A 1273909 0 + 114371477 C e panTro5.chr2A 1313010 0 + 111504155 C a score=68068.000000 s hg38.chr2_KI270774v1_alt 35354 21 + 223625 CTGAGCTCCT-----------------------------------TTGGACTAGGA s gorGor5.CYUI01015607v1 1299608 21 + 1464242 CTGAGCTCCT-----------------------------------TTGGACTGGGA i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1366066 21 + 108979918 CTGAGCTCCT-----------------------------------TTGGTCTGGGA i rheMac8.chr13 I 2 C 0 s macFas5.chr13 1338249 21 - 111193037 CTGAGCTCCT-----------------------------------TTGGTCTGGGA i macFas5.chr13 I 2 C 0 s macNem1.NW_012011978v1 1366553 21 + 3644372 CTGAGCTCCT-----------------------------------TTGGACTGGGC i macNem1.NW_012011978v1 I 2 C 0 s cerAty1.NW_012000820v1 1320583 21 - 10304083 CTGAGCTCCT-----------------------------------TTGGACTGGGA i cerAty1.NW_012000820v1 I 423 C 0 s chlSab2.chr14 1391831 21 - 107702431 CTGAGCTCCT-----------------------------------TTGGACTGGGA i chlSab2.chr14 I 146 C 0 s manLeu1.NW_012103754v1 869320 21 - 2200435 CTGAGCTCCT-----------------------------------TTGGACTGGGA i manLeu1.NW_012103754v1 I 2 I 382 s colAng1.NW_012118821v1 1307624 56 - 13651311 CTGAGCTCCTGGGCTGGGATATGGGCCCCTCTGCCCGCTGAGCTCCTGGGCTGGGA i colAng1.NW_012118821v1 I 2 C 0 s calJac3.chr14 1313659 19 - 108792865 GTGAGCTTTT-------------------------------------GAGCTGAGA i calJac3.chr14 I 1 C 0 s saiBol1.JH378218 1168394 19 - 7082604 CTGACCTCCT-------------------------------------GGGCTGGGA i saiBol1.JH378218 I 1 C 0 s cebCap1.NW_016107827v1 1260115 19 + 1864846 CTGAGCTCCT-------------------------------------GGGCTGGGA i cebCap1.NW_016107827v1 I 1 C 0 s otoGar3.GL873658 898739 9 + 5252280 TTGGGCACC----------------------------------------------- i otoGar3.GL873658 C 0 C 0 e mm10.chr12 89949538 73 - 120129022 I e dasNov3.JH576208 1588006 7188 + 4416731 I e nomLeu3.chr19 1030708 0 + 81552678 C e panPan2.chr2A 1273909 0 + 114371477 C e panTro5.chr2A 1313010 0 + 111504155 C a score=317083.000000 s hg38.chr2_KI270774v1_alt 35375 56 + 223625 TGCAGG-CCCCTCTGCCCCCTG-AGCTCCTTTGGACTGGGATGCAGGCCCCTCTGCCC s panTro5.chr2A 1313010 40 + 111504155 -----------------CCCTG-AGCTCCTTTGGGCTGGGGTGCAGGCCCCTCTGCCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1273909 40 + 114371477 -----------------CCCTG-AGCTCCTTTGGGCTGGGGTGCAGGCCCCTCTGCCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1299629 56 + 1464242 TGCAGG-CCCCTCTGCCCCCTG-AGCTCCTTTGGACTGGGATGCAGGCCCCTCTGCCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1030708 40 + 81552678 -----------------TCCTG-AGCTTCTTTGGACTGGGATGCAGGCCCCTCTGCCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1366087 54 + 108979918 TGCGGG-CCCCTTTGCCCCCTG-AGCTCCTGTG--CTGGGATGCAGGCCCCTCTGCCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1338270 54 - 111193037 TGCGGG-CCCCTTTGCCCCCTG-AGCTCCTGTG--CTGGGATGCAGGCCCCTCTGCCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1366574 56 + 3644372 TGCAGG-CCCCTCTGCCCCCTG-AGCTCCTTTGGACTGGGATGCAGGCCCCTCTGCCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1320604 56 - 10304083 TGTGGG-CCCCTCTGCCCCCTG-AGCTCCTTTGGACTGGGATGCAGGCCCCTCTGCCC i cerAty1.NW_012000820v1 C 0 I 115 s chlSab2.chr14 1391852 56 - 107702431 TGCGGG-CCCCTCTGCCCACTG-AGCTCCTTTGGACTGGGCTTCAGGCCCCTCTGCCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 869723 56 - 2200435 TGCAGG-CCCCTCTGCCCGCTG-AGCTCCTTTGGACTGGGCTGCAGGCCCCTCTGCCT i manLeu1.NW_012103754v1 I 382 C 0 s colAng1.NW_012118821v1 1307680 56 - 13651311 TGTGGA-CCCCTTTGCCTCCTG-AGCACCTTTGGACTGGGCTGCAGGCCCATCTGCCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1313678 54 - 108792865 TGCAGGCCCCCTCTG--CCCATCAGTTGC--TGGCCTGGGATGCGAGCCCCTCTGCCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1168413 52 - 7082604 TGCGGG-CCCCTCTG--CCCGG-AGCTGC--TGGGCTGGGATGTGGGCTCCTCTGCCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1260134 52 + 1864846 TGCAGG-CCCCTCTG--CCTGG-AGCTGC--TGGGCTGGGATGAGGGCTCCTCTGCCC i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 898748 44 + 5252280 ----GG-CCCCGCTG--CCCCG-AGCTCCC-TGCACTGTGACATCG--CCTTCCG--- i otoGar3.GL873658 C 0 C 0 e mm10.chr12 89949538 73 - 120129022 I e dasNov3.JH576208 1588006 7188 + 4416731 I a score=209366.000000 s hg38.chr2_KI270774v1_alt 35431 27 + 223625 ATTGAGCTCCTGGGCACAGTGAGGCTG s panTro5.chr2A 1313050 27 + 111504155 ATCGAGCTCCTGGGCACAGTGAGGCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1273949 27 + 114371477 ATCGAGCTCCTGGGCACAGTGAGGCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1299685 27 + 1464242 ATCGAGCTCCTGGGCACAGTGAGGCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1030748 27 + 81552678 GCCAAGCTCCTGGGCACGGTGAGGCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1366141 27 + 108979918 CCTGAGCTCCTGGGCATGGTGAGGCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1338324 27 - 111193037 CCTGAGCTCCTGGGCATGGTGAGGCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1366630 27 + 3644372 GCTGAGCTCCTGGGCATGGTGAGGCTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1320775 27 - 10304083 GCTGAGCTCCTGAGCATGGTGAGGCTG i cerAty1.NW_012000820v1 I 115 C 0 s chlSab2.chr14 1391908 27 - 107702431 GCTGAGCTCCTGGGCATGGTGAGGCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 869779 27 - 2200435 GCTGAGCTCCTGGGCATGGTGAGGCTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1307736 27 - 13651311 GCTGAGCTCCTGGGCATGGTGAGGCTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1313732 26 - 108792865 -CTGAGCTTCTGGGCTGCGTGAGGCTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1168465 26 - 7082604 -CTGAGCTCCTGGGCTGGGTGAGGCTG i saiBol1.JH378218 C 0 M 2054 s cebCap1.NW_016107827v1 1260186 26 + 1864846 -CTGAGCTCCTGGGCTGGGTGAGGCTG i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 898792 6 + 5252280 ----------TGGGCA----------- i otoGar3.GL873658 C 0 C 0 e mm10.chr12 89949538 73 - 120129022 I e dasNov3.JH576208 1588006 7188 + 4416731 I a score=561263.000000 s hg38.chr2_KI270774v1_alt 35458 92 + 223625 GGCCTGTGCAGGCCTCCTCCTAGCAGCTGGGCCCCGTGTCAGG-TTTGAGCACACA---GTTCAGCAACCCTGCGAGT--GTA----------------------------------------------------------------------------------------------------Aactcagtaggtcag s panTro5.chr2A 1313077 92 + 111504155 GGCCTGTGCAGGCCTCCTCCTAGCAGCTGGGCCCCGTGTCAGG-TTTGAGCACACA---GTTCAGCAACCCTGCGAGT--GTA----------------------------------------------------------------------------------------------------Aactcggtaggtcag i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1273976 92 + 114371477 GGCCTGTGCAGGCCTCCTCCTAGCAGCTGGGCCCCGTGTCAGG-TTTGAGCACACA---GTTCAGCAACCCTGCGAGT--GTA----------------------------------------------------------------------------------------------------Aactcggtaggtcag i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1299712 92 + 1464242 GGCCTGTGCAGGCTTCCTCCTAGCAGCTGGGCCCCGTGTCAGG-TTTGAGCACACA---GTTCAGCAACCCTGCGAGT--GTA----------------------------------------------------------------------------------------------------Aactcggtaggtcag i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1030775 92 + 81552678 GGCCTGTGCAGGCCTCTTCCTAGCAGCTGGGCCCCATGTCAGG-TTTGAGCACACA---GTTCAGCAACCCTGCGAAT--GTA----------------------------------------------------------------------------------------------------Aactcagtgggtcag i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1366168 90 + 108979918 GGCCTGTGCAGGCCTCCTCCTAGCAACC--CCTCCTAGTCAGG-GTTGAGCACACA---GTCCAGCAACCCTGCGAGT--GTA----------------------------------------------------------------------------------------------------Aactcagtaggtcag i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1338351 90 - 111193037 GGCCTGTGCAGGCCTCCTCCTAGCAACC--CCTCCTAGTCAGG-GTTGAGCACACA---GTCCAGCAACCCTGCGAGT--GTA----------------------------------------------------------------------------------------------------Aactcagtaggtcag i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1366657 90 + 3644372 GGCCTGTGCAGGCCTCCTCCTAGCAACC--CCTCCTAGTCAGG-GTTGAGCACACA---GTCCAGCAACCCTGCGAGT--GTA----------------------------------------------------------------------------------------------------Aactcagtaggtcag i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1320802 90 - 10304083 GGCCTGTGCAGGCCTCCTCCTGGCAACC--CCTCCTAGTCAGG-GTTGAGCACACA---GTCCAGCAACCCTGTGAGT--GTA----------------------------------------------------------------------------------------------------Aactcagtaggtcag i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1391935 90 - 107702431 GGCCTGTGCAGGCCTCCTCCTAGCAACC--CCTCCTAGTCAGG-GTTGAGCACACA---GTCCAGCAACCCTGTGAGT--GTA----------------------------------------------------------------------------------------------------Aactcagtaggtcag i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 869806 90 - 2200435 GGCCTGTGAAGGCCTCCTCCTAGCAACC--CCTCCTAGTCAGG-GTTGAGCACACA---GTCCAGCAACCCTGCGAGT--GTA----------------------------------------------------------------------------------------------------Aactcagtaggtcag i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1307763 189 - 13651311 GGCCTGTGC-TGCCTCCTCCTAGCAACC--CCTCCTAGTCAGG-GTTGAACACACA---GTCCAGCAACCCTGCGAGT--GTAAactcagtaggtcagggtggagcctgagattctgcctgtccagcaggctcccaggagatgctgtctctgcaggaccactccccataaagcttgtgagttcaactcagtaggtcag i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1313758 79 - 108792865 GGCCTGTGTAGGCCTCCCCCTAGCAGCTGTGCTCTGTGTCAGG-GTGGAGCACACA---GTTTAGtgaccctgtgagt--gtc----------------------------------------------------------------------------------------------------aa------------- i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1260212 91 + 1864846 GGCCTGTGTAGGCCTCCCCC-AGCAGCTGTGCTCCATGTCAGG-GTGGAGCACACA---GTTTAGCGACCCTGTGAGT--GTA----------------------------------------------------------------------------------------------------Aactcagtaggtcaa i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 898798 82 + 5252280 ----------------TCCCCAGCAGCCGTGTCCAGCTTTTGACACTGAGCACTCAGTTGTCCAGTGACAAGCAGAGCTGTTA----------------------------------------------------------------------------------------------------AGtccagcagatccg i otoGar3.GL873658 C 0 C 0 e mm10.chr12 89949538 73 - 120129022 I e saiBol1.JH378218 1168491 2054 - 7082604 M e dasNov3.JH576208 1588006 7188 + 4416731 I a score=4665879.000000 s hg38.chr2_KI270774v1_alt 35550 603 + 223625 ggtggagcctgagattctgcctgtccaacagcctcccaggaaatgctgtctctgcaggaccacTCCCCATAAAGCTTATGAGTTTATTCTTGGGCATTTTGTAATATGGC----GACCTCATAGTTTCAAGGTTCTGAAATCTTCAGTGAGTGAAACA-GCTGGTCCCACTGGGCTAAGGATCAGATTCT--ACttcaagtgccagtcttgcaacacattggccttgtcaccttgcacaggttatttaaatctctgttttctcatttgaaaaatgaggACTGTATCACCTACATTTTATTTTATTTTACC--TT--AGCTTTGAGGCTAAGGATGCCTTATTAATTTGACAAAGATGGTTTGGTGAAAATAGCAATGTCTGCTGGGTATTGATGTTGTACCGGAAACCTTACCAT------TCTCATCAGCCACCTCATTCAGTCACCACAGCAGTTCA-GGGGG---CTC--AGTGGGGT-CCTGCCTC----ACAAAGACATCACCTCCCGGCTG--CACAG--------TTGCCCAGCGTGTTCC-----------------------------------TGTGCTGTGTCTGGCTCACC-----------------------------------CCCACCCAGAAATCCACATGGTGCATTTTCGGAAAACTTTCCAGCCATTATGCAAAACCACtgggagcttgaa s panTro5.chr2A 1313169 603 + 111504155 ggtggagcctgagattctgcctgtccaacagcctcccaggaaatgctgTCTCTGCAGTACCACTCCCCATAAAGCTTATGAGTTTATTCTTGGGCATTTTGTAATATGGC----GACCTCATAGTGTCAAGGTTCTGAAATCTTCAGTGAGTGAAACA-GCTGGTCCcactgggctaaggatcagattct--acttcaagtgccagtcttgcaacacattggccttgtcaccttgcgcaggttatttaaatctctgttttctcatttgaaaaatgaggactgtatcacctacATTTTATTTTATTTTACC--TT--AGCTTTGAGGCTAAGGATGCCTTATTAATTTGACAAAGATGGTTTGGTGAAAATAGCAATGTCTGCTGGGTATTGATGTTGTACCGGAAACCTTACCAT------TCTCATCAGCCACCTCATTCAGTCACCACAGCAGTTCT-GGGGG---CTC--AGTGGGGT-CCTGCCTC----ACAAAGACATCACCTCCGAGCTG--CACAG--------TTGCCCAGCGTGCTCC-----------------------------------TGTGCTGTGTCTGGCTCACC-----------------------------------CCCACCCAGAAATCCACATGGTGCATTTTCGGAAAACTTTCCAGCCATTATACAAAACCACtgggagcttgaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1274068 603 + 114371477 ggtggagcctgagattctgcctgtccaacagcctcccaggaaatgctgtctctgcaggaccacTCCCCATAAAGCTTATGAGTTTATTCTTGGGCATTTTGTAATATGGC----GACCTCATAGTGTCAAGGTTCTGAAATCTTCAGTGAGTGAAACA-GCTGGTCCcactgggctaaggatcagattct--acttcaagtgccagtcttgcaacacattggccttgtcaccttgcgcaggttatttaaatctctgttttctcatttgaaaaatgaggactgtatcacctacATTTTATTTTATTTTACC--TT--AGCTTTGAGGCTAAGGATGCCTTATTAATTTGACAAAGATGGTTTGGTGAAAATAGCAATGTCTGCTGGGTATTGATGTTGTACCGGAAACCTTACCAT------TCTCATCAGCCACCTCATTCAGTCACCACAGCAGTTCT-GGGGG---CTC--AGTGGGGT-CCTGCCTC----ACAAAGACATCACCTCCGAGCTG--CACAG--------TTGCCCAGCGTGCTCC-----------------------------------TGTGCTGTGTCTGGCTCACC-----------------------------------CCCACCCAGAAATCCACATGGTGCATTTTCGGAAAACTTTCCAGCCATTATACAAAACCACtgggagcttgaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1299804 602 + 1464242 ggtggagcctgagattctgcctgtccaacagcctcccaggaaatgctgtctctgcaggaccacTCCCCATAAAGCTTACGAGTTTATTCTTGGGCGTTTTGTAATATGGC----GACCTCATAGTGTCAAGGTTCTGAAATCTTCAGTGAGTGAAACA-GCTGGTCCCGTTGGGCTAAGGATCAGATTCT--ACttcaagtgccagtcttgcaacacattggccttgtcaccttgcacaggttatttaaatctctgttttctcgtttgaaaaatgaggACTGTATCACCTACATTTTATTTTATTTTACC--TT--AGCTTTGAGGCGAAGGATGCCTTATTAATTTCACAAAGATGGTTTGGCGAAAATAGCAATGTCTGCTGGGTATTGATGTTGTACCGGAAACCTTACCAT------TCTCATCAGCCACCTCATTCAGTCACCACAGCAGTTCT-GGGGG---CTC--AGTGGGGT-CCTGCCTC----ACAAAGACATCACCTCCGAGCTG--CACAG--------TTGCCCAGCGTGCTCC-----------------------------------TGTGCTGTGTCTGGCTCA-C-----------------------------------CCCACCCAGAAATCCACATGGTGCATTTTCGGAAAATTTTCCAGCCATTATACAAAACCACtgggagcttgaa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1030867 598 + 81552678 ggtggagcctgagattctgcctgtccaacagcctcccaggaaatgctgtgtctgcaggaccacTCGCCATAAAGCTTATGAGTTTATTCTTGGGCGTTTTGTAATATGGC----GACCTCATAGTGTCAAGGTTCTGAAATCTTCAATGAGCGAAACA-GCTGGTCCCATTAGGCTAAGGATCAGATTCT--ACttcaagtgccagtcttgcaatacattggccttgtcaccttgcacaggttatttaaatatctgttttctcatttgaaaaatgaggACTGTATCACCTAC-----ATTTTATTTTACC--TT--AGCTTTGAGGCTAAGGATGCCTTATTAATTTGACAAAGATAGTTTGGTGAAAATAGCGATGTCTGTTGGGTGTTGATGTTGTACTGGAAACCTTACCCT------TCTCATCAGCCACCTCATTCAGTCACCACAGCAGTTCT-GGGGG---CTC--AGTGGGGT-CCTGCCTC----ACAAAGACATCACCTCCGAGCTG--CACAG--------TTGCCCAGCGTGCTCC-----------------------------------TATGCTGCGTCTAGCTCACA-----------------------------------CCCACCCAGAAACCCACATGGTGTATTTTCAGAAAAATTTCCAGCCACTATACAAAACCACtgggaacttgaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1366258 635 + 108979918 ggtggagcctgagattctgcctgtccaacagactcccaggaaatgctgtctctgcaggaccacTCCCCAT-AAGCTTATGAGTTTATTCTTGGGCGTTTTGTAATACGGC----GACCTCGTAGTGTCAAGGTTCTGAAATCTTCCATGAGTGAAACA-TCAGGTCCcattgggctaagaatcagattct--acttcaggtgccaatcttgcaacacattggccttgtcaccttgcacgggttatttaaatctctgttttctcatttgaaaaatgaggactgtgtcacctacATTTTGTTTTATTTTACC--TT--AGCTTTGAGGCTAAAGATGCCTTATTCATTTGACAAAGATGGTTTGATGAAAATGGCAATGTCTGTTGAGCATTGATGCTGTACCGGAAACCTTACCCT------TCTCATCAGCCACCTCATTCAGTCACCACAGCAGTTCT-GGGAG---CGC--AGTGGGGT-CCTGCCTC----ACAAAGACGTCACCTCCGAGCTG--CACAG--------TTGCCCAGCGTGCTCC-----------------------------------TGTGCTGCGTCTGGCTCACAACCACCCAGTGCTCCTGTGCTGCGTCTGGCTCATGACCACCCAAAAATCCACATGGTGCCTTTTCAGAAAA-TTTCCAGCCA-TATACAAAACCCCTGGGAGCTTGAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1338441 635 - 111193037 ggtggagcctgagattctgcctgtccaacagactcccaggaaatgctgtctctgcaggaccacTCCCCAT-AAGCTTATGAGTTTATTCTTGGGCGTTTTGTAATACGGC----GACCTCGTAGTGTCAAGGTTCTGAAATCTTCCATGAGTGAAACA-TCAGGTCCcattgggctaagaatcagattct--acttcaggtgccaatcttgcaacacattggccttgtcaccttgcacgggttatttaaatctctgttttctcatttgaaaaatgaggactgtgtcacctacATTTTGTTTTATTTTACC--TT--AGCTTTGAGGCTAAAGATGCCTTATTCATTTGACAAAGATGGTTTGATGAAAATGGCAATGTCTGTTGAGCATTGATGCTGTACCGGAAACCTTACCCT------TCTCATCAGCCACCTCATTCAGTCACCACAGCAGTTCT-GGGGG---CGC--AGTGGGGT-CCTGCCTC----ACAAAGACGTCACCTCCGAGCTG--CACAG--------TTGCCCAGCGTGCTCC-----------------------------------TGTGCTGTGTCTGGCTCACAACCACCCAGTGCTCCTGTGCTGCGTCTGGCTCATGACCACCCAAAAATCCACATGGTGCCTTTTCAGAAAA-TTTCCAGCCA-TATACAAAACCCCTGGGAGCTTGAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1366747 671 + 3644372 ggtggagcctgagattctgcctgtccaacagactcccaggaaatgctgtctctgcaggaccacTCCCCATAAAGCTTATGAGTTTATTCTTGGGCGTTTTGTAATACGGC----GACCTCGTAGTGTCAAGGTTCTGAAATCTTCCATGAGTGAAACA-TCAGGTCCCATTgggctaagaatcagattct--acttcaggtgccaatcttgcaacacattggccttgtcaccttgcacgggttatttaaatctctgttttctcatttgaaaaatgaggACTGTGTCACCTACATTTTGTTTTATTTTACC--TT--AGCTTTGAGGCTAAAGATGCCTTAGTCATTTGACAAAGATGGTTTGATGAAAATGGCAATGTCTGTTGAGCATTGATGCTGTACCGGAAACCTTACCCT------TCTCATCAGCCACCTCATTCAGTCACCACAGCAGTTCT-GGGGG---CGC--ATTGGGGT-CCTGCCTC----ACAAAGACGTCACCTCCGAGCTG--CACAG--------TTGCCCAGCGTGCTCCTGTGCTGCGTCTGGCTCACAACCACCCAGTGCTCCTGTGCTGCGTCTGGCTCACAACCACCCAGTGCTCCTGTGCTGCGTCTGGCTCATGACCACCCAAAAATCCACATGGTGCCTTTTCAGAAAA-TTTCCAGCCA-TATACAAAACCCCTGGGAGCTTGAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1320892 601 - 10304083 ggtggagcctgagattctgcctgtccagcaggctcccaggaaatgctgtctctgcaggaccacTCCCCATAAAGCTTATGAGTTTATTCTTGGGCGTTTTGTAATACGGC----AACCTCATAGTGTCAAGGTTCTGAAATCTTCCATGAGTGAAACA-TCAGGTCCCATTgggctaagaatcagattct--acttcaggtgctgatcttgcaacacattggccttgtcaccttgcacaggttatttaaatctctgttttcttatttgaaaaatgaggACTGTGTCACCTACATTTTGTTTTATTTTACC--TT--AGCTTTGAGGCTAAGGATGCCTTATTCATTTGACAAAGATGGTTTGGTGAAAATGGCAATGTCTGTTGAGCATTGATGCTGTACCGGAAACCTTACCCT------TCTCATCAGCCACCTCATTCAGTCACCACAGCAGTTCT-GAGGG---CGC--AGTGGGGT-CCTGCCTC----ACAAAGACATCACCTCCGAGCTG--TACAG--------TTGCCCAGCGTGCTCC-----------------------------------TGTGCTGCGTCTGGCTCACA-----------------------------------ACCACCCAAAAATCCACATGGTGCCTTTTCAGAAAA-TTTCCAGCCA-CATACAAAACCCCTGGGAGCTTGAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1392025 601 - 107702431 ggtggagcctgagattctgcctgtccaacaggctcccaggaaatgctgTCTCTGCACGACCACTCCCCATAAAGCTTATGAGTTTATTCTTGGGCATTTTGTAATACGGC----GACCTCATAGTGTCAAGGTTCTGAAATCTTCCATGAGTGAAACA-TCAGGTCCcactgggctaaggatcagattct--acttcaggtgccaatcttgcaacacattggccttgtcaccttgcacgggttatttaaatctctgttttctcatttgaaaaatgaggactgtgtcacctacATTTTGTTTTATTTTACC--TT--AGCTTTGAGGCTAAGGATGCCTTATTCATTTGACAAAGATGATTTGGTGAAAATGGCAATGTCTGTTGAGCATTGGTGCTGTACCGGAAACCTTACCCT------TCTCATCAGCCACCTCATTCAGTCACCACAGCAGTTCT-GGGGG---CGC--AGTGGGGT-CCTGCCTC----ACAAAGACATCACCTCCGAGCTG--CACAG--------TTGCCCAGCGTGCTCC-----------------------------------TGTGCTGTGTCTGGCTCACA-----------------------------------ACCACCCAAAAATCCACATGGTGCATTTTCAGAAAA-TTTCCAGCCA-TATACAAAACCACTGGGAGCTTGAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 869896 601 - 2200435 ggtggagcctgagattctgcctgtccaacagactcccaggaaatgttgtctctgcaggaccacTCCCCATAAAGCTTATGAGTTTATTCTTGGGCGTTTTGTAATACGGC----GACCTCGTAGTGTCAAGGTTCTGAAATCTTCCATGAGTGAAACA-TCAGGTCCcattgggctaagaatcagattct--acttcaggtgccgatcttgcaacacattggccttgtcaccttgcacaggttatttaaatctctgttttctcatttgaaaaatgaggactgtgtcacctacATTTTGTTTTATTTTACC--TT--AGCTTTGAGGCTAAGGATGCCTTATTCATTTGACAAAGATGGTTTGGTGAAAATGGCAATGTCTGTTGAGCATTGATGCTGTACCGGAAACCTTACTCT------TCTCATTAGCCACCTTATTCAGTCACCACAGCAGTTCT-GAGGG---CGC--AGTGGGGT-CCTGCCTC----ACAAAGACGTCACCTCCGAGCTG--CACAG--------TTGCCCAGCGTGCTCC-----------------------------------TGTGCTGCGTCTGGCTCACA-----------------------------------ACCACCCAAAAATCCAGATGGTGCCTTTTCAGAAAA-TTTCCAGCCA-CATACAAGACCCCTGGGAGCTTGAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1307952 600 - 13651311 ggtggagcctgagattctgcctgtccagcaggctcccaggaaatgctgtctctgcaggaccacTCCCCATAAAGCTTGTGAGTTCATTCTTGGGTGTTTTGTAATACAGC----GACCTCATAGTGTCAAGGTTCTGAAATCTCCCATGAGTGAAACA-TCAGGTCCCAttgggctaaggatcagattct--acttcaggtgccagtcttgcaacacattggccttgtcaccttgcatgggttatttaaatctctgttttctcatttgaaaaatgaggactgtatcacctacATTTTGTTTTATTTTACC--TT--AGCTTTGAGGCC-AGGATGCCTTATTCATTTGACAAAGATGGTTTGGTGAAAATGGCAATGTCTGTTGAGCATTGATGCTGTACCGGAAGCCTTACCCT------TCTCATCAGCCACCTCATTCAGTCACCACAGCAGTTCT-GGGGG---CGC--AGTGGGGT-CCTGCCTC----ACAAAGACATCACCTCCGAGCTG--CACAG--------TTGCCCAGCGTGCTCT-----------------------------------TGTGCTGCGTCTGGCTCACA-----------------------------------ACCACCCAAAAATCCACGTGGTGCATTTTCAGAAAA-TTTCCAGCCA-TGTACCAAACCACTGGGAGCTTGAA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1313837 552 - 108792865 -gtggagcctgagattctgcctgtccagcaggctcccaggaaatgctgtctctgcagaaccacTCTCCATAAAGCTTATGAGTTTATTATTGGGTGTTTCATAATATGGC----CATCTCATAGTGTCAAGGTTCTGAAATCCCCAGTAAGTGAAACA-GCAGGTCCCATcgggcaaagggtcagatcca--gcttcaagtgccaggtttgcaagaaattggccttgtcaccctgtacaggctacttaaatctctgttttctcatttgaaaaatgaggattccatcacctacattgt-----aTTTTACC--TT--AACTTTGAGGCTAAGGGTGCCTT----ATTTGA-----------------------CAATGTCTGTTGGGT--------------------GTCCCTCT------TCTCATCGGCCACCTCATT-AAT---CACAGCAGCTCTGGGGGG---TTC--GG-AGGGTCCCTGCTTCACAGACAGAGACTTCGCCTCCGAGCTGCACACAG--------TGGCCCAGCGTGTTCC-----------------------------------TGTGCTGCATCTGGTTCACA------------------------------------CCACCCAGAAATTCACATGGTGCATTTTCAGAAAAGGTTCCAGCCATTGTAGGAAACCACTCGGAGCTTGAA i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1260303 605 + 1864846 ggtagagcctcagattctgcctgtccagcaggctcccaggaaatgctgtctctgcaggactacTCCCCATAAAGCTTATGAGTTTATTACTGGGTGTTTCATAATACGGC----GATCTCATAGTGTCAAGGTTCTGAAATCCTCAGTAAGTGAAACA-GCAGGTCCCATcgggctaaggatcagatcca--acttcaagtgccaggtttgcaacaaattggccttgtcaccttgtacaggttatttaaatccctattttctcatttgaaaaatgaggATTATATCACCTAAATTTTATTTCATTTTACC--TT--AACTTTGAGGCTAAAGATGCCTT----ATTTGACAAAGGTGGTTTGGTGAAGATGGCAATGTCTGTTGGGTGTTGATGTTGTACCAGAAACGTCACCCT------TCTCATCGGCCACCTCATT-AATCACCACAGCAGCTCTGGGGGG---TTC--GGTGGGGTCCCTGCTTCACAGACAGAGACATCACCTCTGAGCTGCACACAG--------TGGCCCAGCGTGTTCC-----------------------------------TGTGCTGCATCTGGTTCACA------------------------------------CCACCCAGAAATCCACATGGTGTATTTTCAGAAAAGGTTCCAGCCATTATAGGAAACCATTGGGAGCTTGAA i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 898880 574 + 5252280 ggt-gaacctgagatcctgtgtgtctaggaagctcccaggtgatgctTTCTCTGCAGGACTATTCTGGGCAAAACATGTGAGTTTATTCTTGAACATTCAGTGACACGAT----GACTTTATAGTTTCCTAGTTCTGAAATCTTC--TGAGTAGAACA-GAGAAGCCCACAGAGCCAAAGATGAGATTCCTGACTGCAAATGTCAGTTCTGTCAATAATGGCTCTTGTCAGTTGGCAAAAGTTACTTAAAACTCCATCTCC--ATTTGAAAATTGGAGATATTGGCACCTGCTTTTTATTTTATTTTACCCATT--AGCCTTGAGCCTGAGGATGCCTTGCTAATCTGACAAAGA---------GAACTTGCCTGTGTCCACTGGGCAGTGCTAATGTACTGGAAGCC---CCCA------CTGCACCAGTC-CCTCACTGAATCACCGCAGCAATGCTAGGGGG---CTCCTGTTGGGGTCCCTGCTCCTCAGACAAAGACCTTGCCACAGATGTGCCCACAG--------CCTC------TGGTCC-----------------------------------CAGGCTGGGTCTGGGTCACA-----------------------------------CACCCCCAAATGTCCA---------------GAAAATTGTCCAGCCA---CACAAAACCACTGGG-GCTCAAT i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89949611 600 - 120129022 GGAAAAGGCTGAAGTTCTGTCCTTCAGGGAACCTC---GGGAATCCTGGTGATGCAGGATTGTTTGGGGCAACTC--------TCATTCTCAGACAGCTTGCAACATAACATATAACACTATTGTACCAATTTCCTAAAA-CTCTAGCAGGAGGCACAGGGAAGCCCTATGGGGCT---TCTTGGATCCCTGACATCAAGTGACATTTCTGCAACTAACTGGCCTTGTCA-CTTGAAAAGATTGTTTTGAGCTCCATTTCCTCATTTTAAAACTG-GAATGGTGGTCTCTGACTTTTATCTTACTTTATA--TTGCAATTTTGAG-CTGAGGCATTGTTATTGATTTGCCAAAGCTACGTTGAT-AAAGGGATAATATCCATCTCATGGTGATGTTGCTCCAGTGTCTGTCCCCTGATTCCTGTCCTCATCTATCTTAATTAATTA-CACAGGGATGCT-AAGGGAGCCAC--AGTGGGGTTACAGTTTC----ACAGATAGGG-------AAATTA--CACAGTCTCCTGCTTGCCCAGCTCAGCCC-----------------------------------TTCCCTATATTTGA-TCAAA-----------------------------------ACTGCATC-AGACTCAAGGAGTAAATTCTCAGACAATGTACTAGCCA-TGTGGCAAGCCATTAGTAATTTAAA i mm10.chr12 I 73 I 631 e saiBol1.JH378218 1168491 2054 - 7082604 M e dasNov3.JH576208 1588006 7188 + 4416731 I a score=1828925.000000 s hg38.chr2_KI270774v1_alt 36153 253 + 223625 actggctgtggcgggagcacatatacctcagcagtgagcaaaggctgcacatcaggCCCCCTCCATCCCCAGGACAGCCAGGTCACCTGTACA-CCACCTCCCGCCCACAGAAACAGTGGGCGGAAGGAGCACGACCTGAGCTCCAGGGTGTG----TTCATATGTGAGGGCTACAGCCTCATCGTATAAACATAAGGAAGTGCCTGGGGCCCTGGCTTGGACTCTCTGCAGCACCGCAAGTGTGGAATTGAGTTCCG s panTro5.chr2A 1313772 253 + 111504155 actggctgtggcgggagcacatacacctcagcagtgagcaaaggctgcacatcaggccccctccatccccaggacagccaggtcacctgcaca-ccacCTCCCGCCCACAGAAACAGTGGGCGGAAGGAGCACGACCTGAGCTCCAGGGTGTG----TTCATATGTGAGGGCTCCAGCCTCATCGTATAAACATAAGGAAGTGCCTGGGGCCCTGGCTTGGGCTCTCTGCAGCACCGCAAGTGTGGAATTGAGTTCCG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1274671 253 + 114371477 actggctgtggcgggagcacatacacctcagcagtgagcaaaggctgcacatccggCCCCCTCCATCCCCAGGACAGCCAGGTCACCTGCACA-CCACCTCCCGCCCACAGAAACAGTGGGCGGAAGGAGCACGACCTGAGCTCCAGGGTGTG----TTCATATGTGAGGGCTCCAGCCTCATCGTATAAACATAAGGAAGTGCCTGGGGCCCTGGCTTGGGCTCTCTGCAGCACTGCAAGTGTGGAATTGAGTTCCG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1300406 253 + 1464242 actggctgtggcgggagcacatacacctcagcagtgagcaaaggctgcacatcaggccccctccatccccaggacagccaggtcacctgcaca-ccacCTCCCGCCCACAGAATCAGTGGGCAGAAGGAGCATGACCTGAGCTCTAGGGTGTG----TTCATATGTGAGGGCTCCAGCCTCATCGTATAAACATAAGGAAGTGCCTGGGGCCCTGGCTTGGGCTCTCTGCAGCACCACAAGTGTGGAATTGAGTTCCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1031465 253 + 81552678 actggctgtggtgggagcacatacacctcagcagtgagcaaaggctgcatatcaggccccctccatccccaggacagccaggtcacctgcaca-ccacCTCCCGCCCACAGAATCAGTGGGCGGAAGGAGCACGACCTGAGCTCCAGGGTGTG----CTCATATGTGAGGGCTCCAGCCTCATCGTATAAACATAAGGAAGTGCCTGGGGCCCTGGCTTGGGCTGTCTGCAGCACCGCAAGTGTGGAATTGAGTTCCG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1366893 251 + 108979918 ACTGGCTGTGGCGGGAGCACATACACTTCAGCAGTGAG-AGAGGCTGCACATCAGGCCCCCTCCACCCCCGGGACAGCCAGGTCGCCTGCACA-CCACCTCC-GCCCACAGAATCAGTGGGGAGAAGGAGCACGACCTGAGCTCCAGAGTGTG----TTCACATGTGAGGGCTCCAGCCTCATGGTGTAAACGTAAGGAAGTGCCTGGGGCCCTGGCTTGGGCTCTCTGCAGCACTGCAAGTGTGGCATTGAGTGCCG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1339076 251 - 111193037 ACTGGCTGTGGCGGGAGCACATACACTTCAGCAGTGAG-AGAGGCTGCACATCAGGCCCCCTCCACCCCCGGGACAGCCAGGTCGCCTGCACA-CCACCTCC-GCCCACAGAATCAGTGGGGAGAAGGAGCACGACCTGAGCTCCAGAGTGTG----TTCACATGTGAGGGCTCCAGCCTCATGGTGTAAACGTAAGGAAGTGCCTGGGGCCCTGGCTTGGGCTCTCTGCAGCACTGCAAGTGTGGCATTGAGTGCCG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1367418 251 + 3644372 ACTGGCTGTGGCGGGAGCACATACACTTCAGCAGTGAG-AGAGGCTGCACATCAGGCCCCCTCCACCCCCGGGACAGCCAGGTCACCTGCACA-CCACCTCC-GCCCACAGAATCAGTGGGGAGAAGGAGCACGACCTGAGCTCCAGAGTGTG----TTCACATGTGAGGGCTCCAGCCTCATGGTGTAAACGTAAGGAAGTGCCTGGGGCCCTGGCTTGGGCTCTCTGCAGCACTGCAAGTGTGGCATTGAGTGCCG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1321493 251 - 10304083 ACTGGCTGTGGCGGGAGCACATACACTTCAGCAGTGAG-AGAGGCTGCACATCAGGCCCCCTCCACCCCCGGGACAGCCAGGTCGCCTGCACA-CCACCTCT-GCCCACAGAATCAGTGGGGAGAAGGGGCACGACCTGAGCTCCAGAGTGTG----TTCACATGTGAGGGCTCCAGCCTCATGGTGTAAACGTAAGGAAGTGCCTGGGGCCCTGGCTTGGGCTCTCTGCAGCACTGCAGGTGTGGAATTGAGTTCCG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1392626 251 - 107702431 ACTGGCTGTGGCGGGAGCACATACACTTCAGCAGTGAG-AGAGGCTGCACATCAGGCCCCCTCCACCCCCAGGACAGCCAGGTTGCCTGTACA-CCACCTCC-ACCCACAGAGTCAGTGGGGAGAAGGAGCACGACCTGAGCTCTAGAGTGTG----TTCACATGTGAGGGCTCCAGCCTCATCGTGTAAACGTAAGGAAGTGCCTGGGGCCCTGGCTTGGGCTCTCTGCAGCACTGCAAGTGTGGAATTGAGTTCCG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 870497 251 - 2200435 ACTGGCTGTGGCGGGAGCACATACACTTCAGCAGTGAG-AGAGGCTGCACATCAGGCCCCCTCCACCCCCGGGACAGCCAGGTCGCCTGCACA-CCACCTCC-GCCCACAGAATCAGTGGGGAGAAGGGGCACAACCTGAGCTCCAGAGTGTG----TTCATGTGTGAGGGCTCCAGCCTCATGGTGTAAACGTAAGGAGGTGCCTGGGGCCCTGGCTTGGGCTCTCTGCAGCACTGCAAGTGTGGAATTGAGTTCCG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1308552 252 - 13651311 ACTGGCTGTGGCGGGAGCACATACACTTCAGCCGTGAG-AGAGGCTGCAGATCAGGTCCCCTCCCACCCCGGGACAGCCGGGTCACCTGCACA-CCACCTCCTGCCCACGGAATCAGTGTGGGGAAGGAGCACGACCTGAGCTCCAGAGTGTG----TTCATATGTGAGGGCTCCAGCCTCATAGTGTAAATGTAAGGAAGTGCCTGGGGCCCTGGCTTGGGCTGTCTGCAGCACTGCAAGTGTGGAATTGAGTTCCG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1314389 246 - 108792865 ACTGGCTGTGGCGGGAGCTGGTACACCTCAGCAATGAGCAAAG-------ATCAGGCCCCCTCCACCCCAGGGACAACCAGGTCACAGGCACA-CCCCCTCCTGCCCACAGAACCAGTGGGTGGAAGGAGGACGACCTGAGCTCCCTGGTGTG--TCTTCATATGTGAGGGCTCCAGCCTCATACTATAAGCAGAAGGAAGTG-CTGGGGCCCTGGCTTGGGCTCGCTGCAGCACTGCAGATGTGGAACTGAGGTCC- i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1260908 242 + 1864846 ACTGGCTGTGGTGGGAGCTGGTA-----CAACAATGAGTAAAG-------ATCAGGCCCCCTCCACCCCCGGGACAACCAGGTCACAGGCACACCCCCCTCCTGCCCACAGAACCAGTGGTTGGAAGGAGCACGACCTGAGCTCCCCGGTGTG--TCTTCATTTGTGAAGGCTCCAGCTTCATAGTATAAGCAAAAGGAAGTG-CTGGGGCGCTGGCTTGGGCTCGCTGCAGCACTGCAGATGGGGAACTGAGGTCC- i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 899454 229 + 5252280 CTTGGCTGTAGGGAGTGTGTGGACCCCACAGCAATGCACAGATGCTCCCGACCAGAGCTCCCACCACCCTTGGAGAGCCGGGTTCCA---GCA-GCACTTTT-----------------------AGTGACAAGCTCTGAATGCCTGTGTGTCTGTCTCTGAATCAGAGGTACTGACCGTCATAGCATGAAAATGGGAACATG-GTCCGGCCCCAGCCGGAGTTCTCTGCAGAACAGGAAGAGGTGAATTGAGATCT- i otoGar3.GL873658 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1168491 2054 - 7082604 M e dasNov3.JH576208 1588006 7188 + 4416731 I a score=6394485.000000 s hg38.chr2_KI270774v1_alt 36406 761 + 223625 GGGTGTGGCTGTTCCTCGTGATTGTTGCATTTCATCCTATACTTCTTGGGCTTATTCTAAGACAAACTACAAAGCATCCTCGCTTA-TTCCAGGTATTC----ATTCATGCATTGAACAACCATCTCTTTCAAGTCTTGCTTTGAGGGCCAAGTCCCCACAGCCACCTCCTTGAATTCAC--GGGGCCGTCAGTGACAGAGGAGTG---------GCCTGCGGTGAAAGGCAGCCTGAGTTCAGATTGCTGTGGCCCAGTGGAAACGGTTCTCTTCAATGC---TGATTGACTTCACCTTTGCCCCCTTTC-CCATAGGGCCATTAGGTAATGATTGGGAAAACTAAGAACCCAGGATGG---CTGCTCATCGGAGGG---GCCAGTCATCTCACAGACACTTTGTGACAAATGTCCAGCAGTTTGTGCACTGAGACGGAAAAATGGACCGTGCCGTAAGGAGGTGTGATTTCCACTGGAGGAGATTGATTGAGGACAT-TTGGTAATATTAGCATTTATGTGTTGATTGAAAGTGTCACTCTGGTGATAGATGGGGCATGCCTGCGCGTAAAGAGT----GGGAAAG-AAAAAACGTTTTCTCCGGTGATGGGTGACCTCACCGTTCACATTTTGACAAGCACAGGAT-AGAGCCTCATGGCGTCCTAAAAGTTTTACCTAATTAGGGAAAAATTCAGGGTGTTAAAGCACTCAGCTGTTGAAAACTGTGCCAAGATGTGGGTCATATTTAAAATCATTGTTTCAGCCACCGTTAAATATTAAAAAAC--------TTTAT s panTro5.chr2A 1314025 761 + 111504155 GGGTGTGGCTGTTCCTCGTGATTGTTGCATTTCATCCTATACTTCTTGGGCTTTTTCTAAGACAAACTACAAAGCATCCTCGCTTA-TTCCAGGTATTC----ATTCATGCATTGAACAACCATCTCTTTCAAGTCTTGCTTTGAGGGCCGAGTCCCCACAGCCACCTCCTTGAATTCAC--GGGGCCGTCAGTGACAGAGGAGTG---------GCCTGCGGTGAAAGGCAGCCTGTGATCGGATTGCTGTGGCCCAGTGGAAATGGTTCTCTTCAATGC---TGATTGACTTCACCTTTGCCCCCTTTC-CCATAGGGCCATTAGGTAATGATTGGGAAAACTAAGAACCCAGGATGG---CTGCTCATCGGAGGG---GCCAGTCATCTCACAGACACTTTGTGACAAATGTCCAGCAGTTTGTGCACTGAGACGGAAAAATGGACCGTGCCGTAAGGAGGTGTGATTTCCACTGGAGGAGATTGATTGAGGACAT-TTGGTAATATTAGCATTTATGTGTTGATTGAAAGTGTCACTCTGGTGATAGATGGGGCATGCCTGCGCGTAAAGAGT----GGGAAAG-AAAAAACGTTTTCTCCGGTGATGGGTGACCTCACCGTTCACATTTTGACAAGCACAGGAT-AGAGCCTCATGGCGTCCTAAAAGTTTTACCTAATTAGGGAAAAATTCAGGGTGTTAAAGCACTCAGCTGTTGAAAACTGTGCCAAGATGTGGGTCATATTTAAAATCATTGTTTCAGCCACCATTAAATATTTAAAAAC--------TTTAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1274924 761 + 114371477 GGGTGTGGTTGTTCCTCGTGATTGTTGCATTTCATCCTATACTTCTTGGGCTTTTTCTAAGACAAACTACAAAGCATCCTCGCTTA-TTCCAGGTATTC----ATTCATGCATTGAACAACCATCTCTTTCAAGTCTTGCTTTGAGGGCCGAGTCCCCACAGCCACCTCCTTGAATTCAC--GGGGCCGTCAGTGACAGAGGAGTG---------GCCTGCGGTGAAAGGCAGCCTGTGATCGGATTGCTGTGGCCCAGTGGAAATGGTTCTCTTCAATGC---TGATTGACTTCACCTTTGCCCCCTTTC-CCATAGGGCCATTAGGTAATGATTGGGAAAACTAAGAACCCAGGATGG---CTGCTCATCGGAGGG---GCCAGTCATCTCACAGACACTTTGTGACAAATGTCCAGCAGTTTGTGCACTGAGATGGAAAAATGGACCGTGCCGTAAGGAGGTGTGATTTCCACTGGAGGAGATTGATTGAGGACAT-TTGGTAATATTAGCATTTATGTGTTGATTGAAAGTGTCACTCTGGTGATAGATGGGGCATGCCTGCGCGTAAAGAGT----GGGAAAG-AAAAAACGTTTTCTCCGGTGATGGGTGACCTCACCGTTCACATTTTGACAAGCACAGGAT-AGAGCCTCATGGCGTCCTAAAAGTTTTACCTAATTAGGGAAAAATTCAGGGTGTTAAAGCACTCAGCTGTTGAAAACTGTGCCAAGATGTGGGTCATATTTAAAATCATTGTTTCAGCCACCATTAAATATTTAAAAAC--------TTTAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1300659 761 + 1464242 GGGTGTGGCTGTTCCTCGTGATTGTTGCATTTCATCCTATACTTCTTGGGCTTTTTCTAAGACAAACTACAAAGCATCCTCGCGTA-TTCCAGGTATTC----ATTCATGCATTGAACAACCTTCTCTTTCAAGTCTTGCTTTTAGGGCTGAGTCCTCACAGCCACCTCCTTGAATTCAC--GGGGCCGTCAGTGACAGAGGAGTG---------GCCTGCGGTGAAAGGCAGCCTGTGTTCGGATTGCTGTGGCCCAGTGGAAACGGTTCTCTTCAATGC---TGATTGACCTCACCTTTGCCCCCTTTC-CCATAGGGTCATTAGGTAACGATTGGGAAAACTAAGAACCCAGGATGG---CTGCTCATTGGAGGG---GCCAGTCATTTCACAGACACTTTGTGACAAATGTCCAGCAGTTTGTGCACTGAGACGGAGAAATTGACCATGCCGTAAGGAGGTGTGATTTCTACTGGAGGAGATTGATTGAGGACAT-TGGGTAATATTAGCATTTATGTGTTGATTGAAAGTGTCACTCTGGTGATAGATGGGGCATGCCTGCGCATAAAGAGT----GGGAAAG-AAAAAACGTTTTCTCTGGTGATGGGTGACCTCACCGTTCACGTTTTGACAAGCACAGGAT-AGAGCCTCATGGCGTCCTAAAAGTTTTACCTAATTAGGGAAAAATTCAGGGTGTTAAAGCACTCAACTGTTGAAAACTGTGCCAAGATGTGGGTCATATTTAAAATCATTGTTTCAGCCACCATTAAATATTAAAAAAC--------TTTAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1031718 761 + 81552678 GGGTGTGGCTGTTCCTGGTGATTGTTGCATTTCATCCTATACTTCTTGGGCTTTTTCTAAGGCAAGCTACAAAGCATCCTCACTTA-TTCCAGGTATTC----ATTCATGCATTGAACAACCATCTCTTTCGAGTCTAGCTTTGAGGGCCAAGTCCCCACAGCCACCTCCTTGAATTCAT--GGGGCCGTCAGTGGCAGAGGAGTG---------GCCTGCCGTGAAAGGCAGCCTGTGTTCGGATTGCTGTGGCCCAGTGGAAACGGTTCTCTTCAATGC---TGATTGACTTCACCTTTGCCCCCTTTC-CCATAGGGCCGTTAGGTAATGATTGGGAAAACTAAGAACCCAGGATGG---CTGCTCATTGGAGGG---GCCAGTCATCTCACTGACACTTTGTGACAAATGTCCAGCAGTTTGTGCACTGAGACGGAAAAATGGACCATGCCATAAGGAGGTGTGATTTCCACTGGAGGAGATTGATTGAGGACAT-TGGGTAATACTAGCATTTATATGTTGATTGAAAGTGTCACTCTGGTGATAGATGGGGCATGCCTGCACGTAAAGAGT----GGGAAAA-AAAAAATGTTTTCTCTGGTGATGGGTGACCTCACCATTCACATTTTGACAAGCACAGGTT-AGAGCCTCATGGCATCCTAAAAGTTTTACCTAATTAGGGAAAAATTCAGGGTGTTAAAGCACTCAACTGTTGAAAACTGTGCCAAGATGTGGGTCATATTTAAAATCATTGTTTCAGCCACCATTAAATATTAAAAGAC--------TTTAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1367144 758 + 108979918 GGGTGTGACTGTTCCTCGTTATTGTTGCGTTTCATCCTGTACTTCTTGGGCTTTTTCTAAGGCAAACTACAAAGCATTCTCACTTA-TTCCAGGTATTC----ATTCATGCATTGAACAACCATCTCTTTCAAGTCTTGCTTTGAGAGCCAAGTCCCCATAACCACCTCCTTGAATTCAT--GGGTCCGTCGGTGGCAGAGGAGTG---------GCCTGCGGTGAATGGCAGCCTGTGTTTGGATTGCTGTGGCTCAGTGGAAATGGTTTTCTTCAGTGC---TGATTGACTTCACCTTTGCCCCCTTTC-CCATAGGGCCATTAGGTAACGATTGGGAAAACTAAGAACCCAGGATGG---CTGCTCATCGGA-GG---GCCAGTCATCTCACAGGCACTTTGTGACAAATGTCCAACAGTTTGTGCACTGAGACGGATAAATGGACCGTGCAGTGAGGAGGCGTGATTTCCACTGGAGGAGATTGATTGAGGACAT-GGGGTAATATTAGCATTTATATGTTGATTGAAAGTGTCACTCTGGTGATAGATGGGGCATGCCTGCGCATAAAGA------GGGAAAG-AAAAAGCATTTTCTCCAATGATGGGTGACCTCGTCGTTCACATTTTGACAAGCACAGGAT-AGAGCCTCATGGCGTCCTAAAAGTTTTACCTAATTAAGGAAAAATTCAGGGTGTTAAAGCACTCAACTGTTGAAAACTGTGCCAAGATGTGGGTCATATTTAAAATCATTGTTTCAGCCACCATTAAATATTAAAAGAC--------TTTAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1339327 758 - 111193037 GGGTGTGACTGTTCCTCGTTATTGTTGCGTTTCATCCTATACTTCTTGGGCTTTTTCTAAGGCAAACTACAAAGCATTCTCACTTA-TTCCAGGTATTC----ATTCATGCATTGAACAACCATCTCTTTCAAGTCTTGCTTTGAGAGCCAAGTCCCCATAACCACCTCCTTGAATTCAT--GGGTCCGTCGGTGGCAGAGGAGTG---------GCCTGCGGTGAATGGCAGCCTGTGTTTGGATTGCTGTGGCCCAGTGGAAATGGTTTTCTTCAGTGC---TGATTGACTTCACCTTTGCCCCCTTTC-CCATAGGGCCATTAGGTAACGATTGGGAAAACTAAGAACCCAGGATGG---CTGCTCATCGGA-GG---GCCAGTCATCTCACAGGCACTTTGTGACAAATGTCCAACAGTTTGTGCACTGAGACGGATAAATGGACCGTGCAGTGAGGAGGCGTGATTTCCACTGGAGGAGATTGATTGAGGACAT-GGGGTAATATTAGCATTTATATGTTGATTGAAAGTGTCACTCTGGTGATAGATGGGGCATGCCTGCGCATAAAGA------GGGAAAG-AAAAAGCATTTTCTCCAATGATGGGTGACCTCGTCGTTCACATTTTGACAAGCACAGGAT-AGAGCCTCATGGCGTCCTAAAAGTTTTACCTAATTAAGGAAAAATTCAGGGTGTTAAAGCACTCAACTGTTGAAAACTGTGCCAAGATGTGGGTCATATTTAAAATCATTGTTTCAGCCACCATTAAATATTAAAAGAC--------TTTAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1367669 758 + 3644372 GGGTGTGACTGTTCCTCGTTATTGTTGCGTTTCATCCTATACTTCTTGGGCTTTTTCTAAGGCAAACTACAAAGCATTCTCACTTA-TTCCAGGTATTC----ATTCATGCATTGAACAACCATCTCTTTCAAGTCTTGCTTTGAGAGCCAAGTCCCCATAACCACCTCCTTGAATTCAT--GGGTCCGTCGGTGGCAGAGGAGTG---------GCCTGCGGTGAATGGCAGCCTGTGTTTGGATTGCTGTGGCCCAGTGGAAATGGTTTTCTTCAGTGC---TGATTGACTTCACCTTTGCCCCCTTTC-CCATAGGGCCATTAGGTAACGATTGGGAAAACTAAGAACCCAGGATGG---CTGCTCATCGGA-GG---GCCAGTCATCTCACAGGCACTTTGTGACAAATGTCCAACAGTTTGTGCACTGAGACGGATAAATGGACCGTGCAGTGAGGAGGCGTGATTTCCACTGGAGGAGATTGATTGAGGACAT-GGGGTAATATTAGCATTTATATGTTGATTGAAAGTGTCACTCTGGTGATAGATGGGGCATGCCTGCGCATAAAGA------GGGAAAG-AAAAAGCATTTTCTCCAATGATGGGTGACCTCGTCATTCACATTTTGACAAGCACGGGAT-AGAGCCTCATGGCGTCCTAAAAGTTTTACCTAATTAAGGAAAAATTCAGGGTGTTAAAGCACTCAACTGTTGAAAACTGTGCCAAGATGTGGGTCATATTTAAAATCATTGTTTCAGCCACCATTAAATATTAAAAGAC--------TTTAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1321744 753 - 10304083 GGGTGTGACTGTTCCTCGTTACTGTTGCGTTTCATCCTATACTTCTTGGGCTTT-----AGGCAAACTACAAAGCATTCTCACTTA-TTCCAGGTATTC----ATTCATGCATTGAACAACCATCTCTTTCAAGTCTTGCTTTGAGAGCCAAGTCCCCATAACCACCTCCTTGAATTCAT--GGGTCCGTCGGTGGCAGAGGAGTG---------GCCTGCGGTGAAAGACAGCCTGTGTTTGGGTTGCTGTGGCCCAGTGGAAATGGTTTTCTTCAATGC---TGATTGACTTCACCTTTGCCCCCTTTC-CCGTAGGGCCATTAGGTAATGATTGGGAAAACTAAGAACCCAGGATGG---CTGCTCATCGGA-GG---GCCAGTCATCTCACAGACACTTTGTGACAAATGTCCAACAGTTTGTGCACTGAGACGGATAAATGGACCGTGCAGTAAGGAGGTGTGATTTCCACTGGAGGAGATTGATTGAGGACAT-GGGGTAATATTAGCATTTATATGTTGATTGAAAGTGTCACTCTGGTGATAGATGGGGCATGCCTGCGCATAAAGA------GGGAAAG-AAAAAGCATTTTCTCCAATGATGGGTGACCTCATCGTTCACATTTTGACAAGCACAGGAT-AGAGCCTCATGGCGTCCTAAAAGTTTTACCTAATTAAGGAAAAATTCAGAGTGTTAAAGCACTCAACTGTTGAAAACTGTGCCAAGATGTGGGTCATATTTAAAATCATTGTTTCAGCCACCATTAAATATTAAAATAC--------TTTAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1392877 757 - 107702431 GGGTGTGACTGTTCCTCGTTATTGTTGCGTTTCATCCTATACTTCTTGGGCTTTTTCTAAGGCAAACTACAAAGCACTCTCGCTTA-TTCCAGGTATTC----ATTCATGCATTGAACAACCATCTCTTTCAAGTCTTGCTTTGAGAGCCAAGTCCCCATAACCACCTCCTGGAACTCAC--GGGTCCGTCGGTGGCAGAGGAGTG---------GCCTGCGGTGAAAGGCAGCCTGTGTTTGGGTTGCTGTGGCCCAGTGGAAATGGTTTTCTTCAATGC---TGATTGACTTCACCTTTGCCCCCTTTC-CCATAGGGCCATTAGGTACCAATCGGGAAAACTAAGAACCCAGGATGG---CTGCTCATCGGA-GG---GCCAGTCATCTCACAGACACTTTGTGACAAATATCCAACAGTTTGTGCACCGGGACGGATAAACGGACAGTGCAGCAAGGAGGCGTGGTTTCCACTGGAGGAGACTGGTTGAGGACAC-GGGATAATATTAGCATTTATATGTCGATTGAAAGTGTCACTCTGGTGATAGGTGGGGCATGCCTGCGCATAAAGA------GGGAAAG-AAAAAGCATTTTCTCCAATGATGGGTGACCTCATCGTTCACATTTTGACAAGCAC-GGAT-AGAGCCTCATGGCGTCCTAAAAGTTTTACCTAATTAAGGAAGAATTCAGGGTGTTAAAGCACTCAGCTGCTGAAAACTGTGCCAAGATGTGGGCCATATTTAAAATCATTGTTTCAGCCACCATTAAATATTAAAAGAC--------TTTAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 870748 753 - 2200435 GGGTGTGACTGTTCCTCGTTATTGTTGGGTTTCATCCTATACTTCTTGGGCTTT-----AGGCAAACTACAAAGCATTCTCGCCTA-TTCCAGGTATTC----TTTCATGCATTGAACAACCATCTCTTTCAAGTCTTGCTTTGACAGCCAAGTCCCCATAACCACCTCCTTGAATTCAT--GGGTCCGTCGGTGGCAGAGGAGTG---------GCCTGCGGTGAACGACAGCCTGTGTTTGGGTTGCTGTGGCCCAGTGGAAATGGTTTTCTTCAATGC---TGATTGACTTCATTTTTGCCCCCTTTC-CCATAGGGCCATTAGGTAACGATTGGGAAAACTAAGAACCCAGGATGG---CTGCTCATCGGA-GG---GCCAGTCATCTCACAGACACTTTGTGACAAATGTCCAACAGTTTGTGCACTGAGACGGTTAAATGGACCGTGCAGTAAGGAGGTGTGATTTCCACTGGAGGGGATTGATTGAGGACAT-GGGGTAATATTAGCATTTATATGTTGATTGAAAGTGTCACTCTGGTGATAGATGGGGCATGCCTGCGCATAAAGA------GGGAAAG-AAAAAGCATTTTCTCCAATGATGTGTGACCTCATCGTTCACATTTTGACAAGCACAGGAT-AGAGCCTCATGGCGTCCTAAAAGTTTTACCTAATTAAGGAAAAATTCAGGGTGTTAAAGCACTCAACTGTTGAAAACTGTGCCAAGATGTGGGTCATATTTAAAATCATTGTTTCAGCCACCATTAAATATTAAAAGAC--------TTTAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1308804 761 - 13651311 GGGTGTGACTGTTCCTGGTTATTGTTGCGTTTCATCCTATACTTCTTGGGCTTTTTCTAAGGCAAACTACAAAGCATTCTCGCGTA-TTCCAGGTTCTCGCGTATTCATGCATTGAACAACCATCTCTTTCAAGTCTTGCTTTAAGAGCCAAGTCCCCATAACCACCTCCTGGAATTCAC--GGGTCCGTCGGTGGCAGAGGATTG---------GCCTGCGGTGAAAGGCAGCCTGTG-TTGGATTGCTGTGGCCCAGTGGAAATGGTTTTCTTCAATGC---TGATTGACTTCACCTTTGCCCCCTTTC-CCATAGGGCCATTAGGTAACGACTGGGAAAACTAAGAACCCAGGATGG---CTGCTCATCGGA-GG---GCCAGTCATCTCACAGACACTTTGTGACAAATGTCCAACAGTTTGTGCACTGAGACGGATAAATGGACCGTGCAGTAAGGAGGTGTGATTTCCACTGGAGGAGATTGATTGAGGACAT-GGGGTAATATTAGCATTTGTATGTTGATTGAAAGTGTCACTCTGGTGATAGATGGGGCATGCCTGCGCATCAAGA------AGGAAAG-AAAAAGCGTTTTCTCCAATGATGGGTGACCTCATCGTTCACATTTTGACAAGCACAGGGT-AGAGCCTCATGGCGTCCTAAAAGTTTTACCTAATTAAGGAAAAATTCAGGGCGTTAAAGCACTCAACTCTTGAAAACTGTGCCAAGATGTGGGTCATATTTAAAATCATTGTTTCAGCCACCATTAAATATTAAAAGAC--------TTTAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1314635 761 - 108792865 AGGTGTGGCTGGTCCTCAGGATAG-TGCATTCCATCCTATACTTCCTGGGCTTTTTCTAAGGCATATTACAAAGCATCCTCACTTT-GTCCAGGTATTA----ATTTGTGTATTGAACAGCCATCCCTTCCAAGTCTTGCTTGGAGGGCCAAGTCCCCATTGCCACCCCCTTGAATTGAG--GGGGCCGCTAGTGGCAGAGGAGTG---------GCCACCTGTGACATGCAGCCTGTGTTTGGATTGCTGTGGCCCAGTGGAGGTGGTTCTCATAAATGC---TGGTCGACTTCGCCTTTGCCCCCTTTC-CCATAGGGCCTTTAGGTAACGATTGGGAAAACTAAAAACCCAGGATGG---CCGCTCATCAGAGGG---GCCAGACATCTCA-AGATGCTTTATGACAAATATCCAGCAGTTTGTGCCCTGAGACGGA-AAGTGGGACATGGAGGAAGGAGGTACGATTTCCACTGGAGGAGACTTATTGAGGACAT-GGGGAAATATTTGTATCTATACATTGATTGAAAGTGTCACTCTGGTGATA----GGGCACACCTGCGCGTAAAAGGT----GGGAAAG-AAAAAACATTTTCTCAAGTGATGGGTGACCTCGTCATTCACATTTTGAC-AGCACAGGAT-ACAGCCTCGTGGCATCCTGAATGTTTTACCTAATTAAGGAAAAATTCAGGGTGTTAAAGCACTCAACTGTTGAAAACTGTGCCAAGATGTGGAACATGTTTAAAATCATTGTTTCAGCCACCattaaatatttaaaaattcttattatttGT i calJac3.chr14 C 0 I 2224 s cebCap1.NW_016107827v1 1261150 729 + 1864846 GGGTGTGGCTGGTCCTCAAGATAGTTGCATTCCATCCTATACTTCTTGGGGTTTTTCTAAGCCAAACTACAAAGCATCCTCACTTC--------------------------TTGAACAGCCATCTCTTCCAAGTCTTGCTTTGAAGGCCAAGTCCCTATTGCCAACCCTTTGAATTGAT--GGGGACGCCAGTGGCAGAGGAGTG---------GCCAGGTGTGACATGCAGCCTGTGTTTGGATTGCTGTGGCCCAGTGGAGGCGGTTCTCGTAAATGC---TGGTCGACTTCGCCTTTGCCCCCTTTC-CCATAGGGCCCTTTGGTGATGACTGGGAAAACTGAGAACCCAGCATGG---CCGCTCATCGGAGGG---GCCAGTCATCTCA-AGATGCTTTATGACAAGTATCCAGCAGTTTGTGCCCTGAGACGGA-AAATGGGA---GGTGGAAGGAGGTGCGATTTCCACTGGAGGAGACTGATTGAGGACAT-GGGGAAATATTCGCATTTATATGCTGATTGAAAGTGTCACACTGGTGATA----GGGCACACCT--GCGTAAAGGGT----GGGAAAGAAAAAAATGTTTTCTCAAGTGATGGGTGACCTCATCATTCACATTTTGAC-AGCACAGGAT-ACAGCCTCATGGCTTCCTAAAAGTTTTACGTAATTAAGGAAAAATTCAGGGTGTTAACGCATTCAACTGGTGAAGACTGTGCCAAGACGTGGAACATGTTTAAAATCATTGTTTCAGCCACGATTAAGTATTAAAAGAC--------TTTGT i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 899683 707 + 5252280 GGGCATGATTATTCCTGACATCTGTCATAGCTCATCCTTTA-TTTGGGGGCGTGTTCTAAAGCAAGTTACAAAGCATATTCATTGA-ATCTGGACAGTT----ATTTGTTAATTTTGCA-------CCTTTAA-------------------------------ACCCACTGGGA--AAT--GGG-------GTAGCTGAGGGGTA---------GCTTGCTTGGAAATATGGTCTGCATGGAGATTGCTAAGGCTGGGTGGAGGCTGATCTCTTAAATGCATGTAGATGACTCT-------CCCCCTTCC-CCAGGGAGTCACTAGATGACGGTTCAG-AAACTAAGAACCCAGGATGGCCACTGTTCATGAGCAGG---GCCAG------CTCAGAGACTTTTTAACGAATGTGTAGCGATCTGTGCAGTGAGATGGAAAAACGGATAGTGCAATAAAGACACGTGATTCCC-CTGGAGGAGATTGATTGAGGACGCATAGGCAGTATTAACATTTACATGTTGATTGAAAGTGTCGCTCTTGTGACAGATGGCGTGCGTCTCGGCCTGAGGAATGAGAGGGGAGG-AAGGAATGTTTCTTCAAGTTATGGGTGACCTCATTATGCCCATTCTGACAAGCACA-GTT-AAAGCCTCACGAATTCCTAAAAGTTCTGCCTACTTAAGGAAAATTTCAAGG-GTTAAAACCCCCAAAGGTTGAAAATTGTGCCAAGATGTAGATCATATTTAAAATCATCATCTCAGCTGCCGTTAAAGATTAAAAGAA--------CTTTT i otoGar3.GL873658 C 0 I 1 s dasNov3.JH576208 1595194 755 + 4416731 GGGCATGGTTAGTCTTCATGATTACCATATTCAGACACATACTTTTT-GCCATTTTCTAAGAGAAA-TACAAAGCATATCCATTTTTTTCTAGATATTT----GCTCATTTGTTTAAAAACCATCTTCATCGAGCATAGCTTTTATCACCAAGTTCTCATGGCT-TCTATTTGAATTCATAAGGAATGATCTATGGCCGAGGAATGCCTTATACAGCCTGCTTTGAAATA-AGTATATATTTGAAATACTGTGGCTGAGTGGAAGTTGTTCTCTTAAATGG---TTATAGTCTTTAATTTTTTCTACTTCCTTCAAAGGGTCATTAGATGACAATT----AGACTA-----------------CT--TCATCAGAAGGGAAGTCAATCATCTCACAGACATTTTTTGACAAATGTCTAGCAATTTGTGCACTGAGATGGAAATATAGATAGTCTGATAAAGAAATGTGATTTCTACTGGAGGAGATTTATTGAGGACATCTGGGTAATATTAACATCTATATGTTGATTGAAAGTGTCACTCTTGTGATAGATAGAGCATCCCTGAGAGTAAGGCAT----GTGAAAG-AAGAAATATTTTCACAAGTTATGGGTGACCTCATTATTCATATTTGGATGAGCACTGTATAAGCTCCTCATGGTTTCCTAAAAGTTTTAGCTAATTAAGGAAAAGTTCATGGTATTAAAACATGCAAATGGTGAGAGTTGAGCCAAGTTGTAGATCATATTTAAAATCATTATTTCAGCCACCATCAATTATTAAAAGAC--------TTTGC i dasNov3.JH576208 I 7188 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1168491 2054 - 7082604 M a score=675137.000000 s hg38.chr2_KI270774v1_alt 37167 81 + 223625 AAAAATCTAAGGCATTAGGACAGATATATTGCAGAGGAAAATGACAGGGCTGTAGGAGT--TAGGTGTGGGGGAAGTGGAAGA s panTro5.chr2A 1314786 81 + 111504155 AAAAATCTAAGGCATTAGGACAGATATATTGCAGAGAAAAATGACAGGGCTGTAGGTGT--TAGGTGTGGGGGAAGTGGAAGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1275685 81 + 114371477 AAAAATCTAAGGCATTAGGACAGATATATTGCAGAGAAAAATGACAGGGCTGTAGGTGT--TAGGTGTGGGGGAAGTGGAAGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1301420 81 + 1464242 AAAAATCTAAGGCATTAGGACAGATATGTTGCAGAGGAAGATGACAGGGCTGTAGGAGT--TAGGTGTGGGGGAAGTGGAAGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1032479 81 + 81552678 AAAAATCTAAGGCATTAGGACAGATCTATTGCAGAGGAAAATGACAGGGCTGTAGGAGT--TAGGTGTGGGGGAAGTGGAAGA i nomLeu3.chr19 C 0 I 115 s rheMac8.chr13 1367902 81 + 108979918 AAAAATCTAGGGCGTTAGGACAGATACATTGCAGAGGAAAATGATGGGGCTGTAGGAGT--TGGGTGTGGGGGAAGTGGAAGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1340085 81 - 111193037 AAAAATCTAGGGCGTTAGGACAGATACATTGCAGAGGAAAATGATGGGGCTGTAGGAGT--TGGGTGTGGGGGAAGTGGAAGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1368427 81 + 3644372 AAAAATCTAGGGCGTTAGGACAGATACATTGCAGAGGAAAATGACGGGGCTGTAGGAGT--TGGGTGTGGGGGAAGTGGAAGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1322497 81 - 10304083 AAAAATCTAGGGCGTTAGGACAGATACATTGCAGAGGAAAATGACGGGGCTGTAGGAGT--TGGGTGTGGGGGAAGTGGAAGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1393634 81 - 107702431 AAAAATCTAGGGCGTTAGGACAGATACATTGCAGAGGAAAATGACAGGGCTGTAGGAGT--TGGGTGTGGGGGAAGTGGAAGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 871501 81 - 2200435 AAAAATCTAGGGCGTTAGGACAGATACATTGCAGAGGAAAATGACGGGGCTGTAGGAGT--TGGGTGTGGGGGAAGTGGAAGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1309565 81 - 13651311 AAAATTCTAGGGCGTTAGGACAGATACATTGCAGAGGAAAATGACGGGGCTGTAGGAGC--TGGGTGTGCGGGAAGTGGAAGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1317620 81 - 108792865 aaaaaTCTAGGGCATTAGGACAAGTATATTGCAGAGGAAAGCGATGGGGCGGTAGGAGT--TGGGGGTGGGGGAGGTGGAAGA i calJac3.chr14 I 2224 C 0 s cebCap1.NW_016107827v1 1261879 81 + 1864846 AAAAATCTAGGGCATTAGGACAACTATATTGCAGAGGAAGGTGATGGGGCGGTAGGAGT--TGGGTGTGGGGGAGGTGGAAGA i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 900391 80 + 5252280 AAAAACCTGGGGCAATAGGATGGATCTGCAGCAGAGCAA-ATAAT--GGCAGTGAGAGTTCTTGGGTTGGGGCTGGTGGCCAC i otoGar3.GL873658 I 1 I 3 s dasNov3.JH576208 1595949 73 + 4416731 AAAAATCTGGGTTATTAGAACAAATATATT--------AGTTAACTAGGTGGTaggagt--tcagcagagtgaacctgaaaga i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1168491 2054 - 7082604 M a score=10805.000000 s hg38.chr2_KI270774v1_alt 37248 3 + 223625 ACG s panTro5.chr2A 1314867 3 + 111504155 ACA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1275766 3 + 114371477 ACG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1301501 3 + 1464242 ACG i gorGor5.CYUI01015607v1 C 0 I 230 s rheMac8.chr13 1367983 3 + 108979918 ACG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1340166 3 - 111193037 ACG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1368508 3 + 3644372 ACG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1322578 3 - 10304083 ACG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1393715 3 - 107702431 ACG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 871582 3 - 2200435 ACG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1309646 3 - 13651311 ACG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1317701 1 - 108792865 --G i calJac3.chr14 C 0 I 1 s cebCap1.NW_016107827v1 1261960 1 + 1864846 --G i cebCap1.NW_016107827v1 C 0 I 2 s otoGar3.GL873658 900474 2 + 5252280 CC- i otoGar3.GL873658 I 3 C 0 s dasNov3.JH576208 1596022 3 + 4416731 aca i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1168491 2054 - 7082604 M e nomLeu3.chr19 1032560 115 + 81552678 I a score=80044.000000 s hg38.chr2_KI270774v1_alt 37251 11 + 223625 CCGGGCTGGAG s panTro5.chr2A 1314870 11 + 111504155 CCGGGCTGGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1275769 11 + 114371477 CCGGGCTGGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1301734 11 + 1464242 CCGGGCTGGAG i gorGor5.CYUI01015607v1 I 230 C 0 s nomLeu3.chr19 1032675 11 + 81552678 CCGGACTGGAG i nomLeu3.chr19 I 115 C 0 s rheMac8.chr13 1367986 11 + 108979918 CCGGGCTGGAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1340169 11 - 111193037 CCGGGCTGGAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1368511 11 + 3644372 CCGGGCTGGAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1322581 10 - 10304083 CC-GGCTGGAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1393718 11 - 107702431 CCAGGCTGGAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 871585 11 - 2200435 CCGGGCTGGAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1309649 11 - 13651311 CCGGGCTGGAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1317703 10 - 108792865 CCGGGCCGGA- i calJac3.chr14 I 1 C 0 s cebCap1.NW_016107827v1 1261963 11 + 1864846 CCGGGCCGGAG i cebCap1.NW_016107827v1 I 2 I 4338 s otoGar3.GL873658 900476 9 + 5252280 CAGAGCTGG-- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1596025 11 + 4416731 ctgaagtagaa i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1168491 2054 - 7082604 M a score=51588.000000 s hg38.chr2_KI270774v1_alt 37262 10 + 223625 CTCAGGGACT------------------------------- s panTro5.chr2A 1314881 10 + 111504155 CTCAGGGACT------------------------------- i panTro5.chr2A C 0 I 323 s panPan2.chr2A 1275780 10 + 114371477 CTCAGGGACT------------------------------- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1301745 10 + 1464242 CTCAGGGACT------------------------------- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1032686 10 + 81552678 CTCAGGGACT------------------------------- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1367997 10 + 108979918 CTCAGGGACT------------------------------- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1340180 10 - 111193037 CTCAGGGACT------------------------------- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1368522 10 + 3644372 CTCAGGGACT------------------------------- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1322591 10 - 10304083 CTCAGGGACT------------------------------- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1393729 10 - 107702431 CTCAGGGACT------------------------------- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 871596 10 - 2200435 CTCAGGGACT------------------------------- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1309660 10 - 13651311 CTCAGGCGCT------------------------------- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1317713 10 - 108792865 CTTGGGGGCT------------------------------- i calJac3.chr14 C 0 C 0 s otoGar3.GL873658 900485 9 + 5252280 -TCAGTCCCC------------------------------- i otoGar3.GL873658 C 0 I 2 s dasNov3.JH576208 1596036 41 + 4416731 tttaggaaactggtgatcagtttgtagccctgcactctcct i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1168491 2054 - 7082604 M e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I a score=60063.000000 s hg38.chr2_KI270774v1_alt 37272 11 + 223625 GGCTGTTCCGA s panTro5.chr2A 1315214 11 + 111504155 GGCTGTTCCGA i panTro5.chr2A I 323 C 0 s panPan2.chr2A 1275790 11 + 114371477 GGCTGTTCCGA i panPan2.chr2A C 0 I 106 s gorGor5.CYUI01015607v1 1301755 11 + 1464242 GGCTGTTCCGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1032696 11 + 81552678 GGGTGTTCCGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1368007 11 + 108979918 GGGTGTTCCGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1340190 11 - 111193037 GGGTGTTCCGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1368532 11 + 3644372 GGGTGTTCCGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1322601 11 - 10304083 GGGTGTTCCGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1393739 11 - 107702431 GGGTGTTCCAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 871606 11 - 2200435 GGGTGTTCCGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1309670 11 - 13651311 GGGTGTTCCGT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1317723 11 - 108792865 GGGTGTCCCAT i calJac3.chr14 C 0 C 0 s otoGar3.GL873658 900496 11 + 5252280 TGCTGTGCCCT i otoGar3.GL873658 I 2 I 1 s dasNov3.JH576208 1596077 10 + 4416731 tgctgttaga- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1168491 2054 - 7082604 M e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I a score=1122248.000000 s hg38.chr2_KI270774v1_alt 37283 178 + 223625 GGC---AGAG-CGGCTGCCTGAGTtccc---tgagcctccgc-tttctcatctgtaaagtg-----------------------------------------------------------------ggTA-C-GTTTCCACCTGAAGGGTGTCGCACATTGCGAATGCGATCGGCTGGAGTGACGT----GTGAGAAGAGAATACTTTGGGACTTTACAGCAGGTTAAAATCTTA-T-------TTTT-TCAGGGTTGGTAAATAC s panTro5.chr2A 1315225 177 + 111504155 GGC---AGAG-CGGCTGCCTGAGTtccc---tgagcctccgc-tttctcatctgtaaagtg-----------------------------------------------------------------ggTA-C-GTTTCCACCTGAAGGGTGTCGCACATTGCAAATGCGATCGGCTGGAGTGACGT----GTGAGAAGAGAATACTTTGGGACTTTACAGCAGGTTAAAATCTTA-T-------TTTT--CAGGGTTGGTAAATAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1275907 177 + 114371477 GGC---AGAG-CGGCTGCCTGAGTtccc---tgagcctccgc-tttctcatctgtaaagtg-----------------------------------------------------------------ggTA-C-GTTTCCACCTGAAGGGTGTCGCACATTGCGAATGCGATCGGCTGGAGTGACGT----GTGAGAAGAGAATACTTTGGGACTTTACAGCAGGTTAAAATCTTA-T-------TTTT--CAGGGTTGGTAAATAC i panPan2.chr2A I 106 C 0 s gorGor5.CYUI01015607v1 1301766 178 + 1464242 GGC---AGAG-CGGCTGCCTGAGTCCCC---TGAGCCTCCAC-TTTCTCATCTGTGAAGTG-----------------------------------------------------------------GGTA-C-GTTTCCACCTGAAGGGTGTCGCACATTGCGAATGCGATGGGCTGGAGTGACGT----GTGAGAAGAGAATACTTTGGGACTTTACAGCAGGTTAAAATCTTA-T-------TTTT-TCAGGGTTGGTAAATAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1032707 179 + 81552678 GGC---AGAG-TGGCTGCCTGAGTtccc---tgagcctctgc-gttctcatctgtaaagtg-----------------------------------------------------------------gatatC-GTTTCCACCTGAAGGGTGTCGCACATTGCGAACGCAATGGGCTGGAGTGACGT----GTGAGAAGAGAATACTTTGGGACTTTACAGCAGATTAAAATCTTA-T-------TTTT-TCAAGGTTGGTAAATAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1368018 180 + 108979918 GGC---AGAGCCGGCTGCCCGAGTtccc---cgagcctctgc-tttctcatctgtaaagtg-----------------------------------------------------------------gATA-C-GTTTCCACCTGAAGGATGTCACACATTGCGAATGTGATGGGCTGGGGTGACAC----GTGAGAAGAGAATACTTTGGGACTTTACAGCAGATTAAAATCTTA-T-------TTTTTTCAGGGTTGGCATATAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1340201 180 - 111193037 GGC---AGAGCCGGCTGCCCGAGTtccc---cgagcctctgc-tttctcatctgtaaagtg-----------------------------------------------------------------gATA-C-GTTTCCACCTGAAGGATGTCACACATTGCGAATGTGATGGGCTGGGGTGACAC----GTGAGAAGAGAATACTTTGGGACTTTACAGCAGATTAAAATCTTA-T-------TTTTTTCAGGGTTGGCAAATAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1368543 180 + 3644372 GGC---AGAGCCGGCTGCCCGAGTtccc---cgagcctctgc-tttctcatctgtaaagtg-----------------------------------------------------------------gATA-C-GTTTCCACCTGAAGGATGTCACACATTGCGAATGTGATGGGCTGGGGTGACAC----GTGAGAAGAGAATACTTTGGGACTTTACAGCAGATTAAAATCTTA-T-------TTTTTTCAGGGTTGGCAAATAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1322612 180 - 10304083 GGT---AGAGCCGGCTGCCCGAGTTCCC---CAACCCTCTGC-TTTCTCATCTGTAAACTG-----------------------------------------------------------------GATA-T-GTTTCCACCTGAAGGATGTCACACATTGCGAATGTGATGGGCTGGAGTGACAC----GTGAGAAGAGAATACCTTGGGACCTTACAGCAGATTAAAATCTTA-T-------TTTTTTCAGGGTTGGCAAATAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1393750 182 - 107702431 GGC---AGAGCCGGCTGCCCGAGTTCCC---CGAGCCTCTGCTTTTTTCTTCTGTAAAGTG-----------------------------------------------------------------GATA-C-GTTTCCACCTGAAGGGTGTCACACATTGCGAATGTGATGGGCTGGAGTGACGT----GTGAGAAGAGAATACTTTGGGACTTTCCAGCAGATTAAAATCTTATT-------TTTTTTCAGGGTTGGCAAATAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 871617 180 - 2200435 GGC---Agagccagctgcccgagttccc---cgagcctctgc-tttctcatctgtaaactg-----------------------------------------------------------------gATA-C-GTTTCCACCTGAAGGATGTCACACATTGCGAATGTGATGGGCTGGAGTGACAC----GTGAGAAGAGAATACTTTGGGACTTTACAGCAGATTAAAATCTTA-T-------TTTTTTCAGGTTTGGCAAATAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1309681 180 - 13651311 GGC---Agagccagctgcccgagttccc---cgagcctctgc-tttctcatctgtaaagtg-----------------------------------------------------------------gata-c-atttccacctgaagggtGTCACACATTGCGAATGCGATGGGCTGGAGTGACAT----GTGAGAAGAGAGTACTTTGGGACTTTCCAGCAGATTAAAATCTTA-T-------TTTTTTCAGGGTTGGCAACTAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1317734 240 - 108792865 GGC---GGAG-CCGCTCCCTGAGCTCCCTCGTGAG-----GT-TTTCTCGTCTGTAAAGTGATAACGAAACGTTTCTGTGGCGGAGGTGGCAGAAGCCCGGCCTGAGCCCCCGAGGCCCCGCGTTTGTCA-T-GTTTCCACCTGAAGGGCGTCGCCCTTTGCGAATGCGTCGGGCTGGAGTGACGT----GTGACAAGAGGAAATGGTGGGCCTTTGCGGCAGA-TGATATCCCG-C-------TTTT-TCAGGGATGGCGAATGT i calJac3.chr14 C 0 C 0 s otoGar3.GL873658 900508 161 + 5252280 GGCTCTGGAGCCCTGcacctgagctctc---taattctctgc-tttttcatctgtaaaatg-----------------------------------------------------------------gatg-tagtttccacctaaaaggtgttgcaaactttaaat------ggctggaatggtgg----atgcagagaga--------------tttagcaGTTTAAT-CCCTA-T-------TTGT-AGAGGGTCGGCAG-TAC i otoGar3.GL873658 I 1 C 0 s dasNov3.JH576208 1596087 186 + 4416731 --------tgcatgctgctttagtcctc---tgaccctctac-tttctcatctctcaaatg-----------------------------------------------------------------gata-caatagccacctaAAA-ATATTATAGATTGTATATCTGGGTGAAAGAACTAGTATATTCATGAGAAGAAAATACTTTGGAATGTTAAAGCCATTTAAAAACATA-TAACATCATTTTTTGAAGATTGGCAAGCAT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1168491 2054 - 7082604 M e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I a score=810245.000000 s hg38.chr2_KI270774v1_alt 37461 109 + 223625 CTCTGGGTAGA---CGTTTCACAGGCAACGGGGTCTAAGAG--CCGGGCGGAAGATCTCCCTGTGTCACACAAGGTCGGTTTGACTT-----CAGG--------CTTCTGT-GGCCTCGATTTCTTCA s panTro5.chr2A 1315402 109 + 111504155 CTCTGGGTAGA---CGTTTCACAGGCAACGGGGTCTAAGAG--CCGGGCGGAAGTTCTCCCTGTGTCACACAAGGTCGGTTTGACTT-----CAGG--------CTTCTGT-GGCCTCGATTTCTTCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1276084 109 + 114371477 CTCTGGGTAGA---CGTTTCACAGGCAACGGGGTCTAAGAG--CCGGGCGGAAGTTCTCCCTGTGTCACACAAGGTCGGTTTGACTT-----CAGG--------CTTCTGT-GGCCTCGATTTCTTCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1301944 109 + 1464242 CTCTGGGTAGA---CGTTTCACAGGCAACGGGGTCTAAGAG--CCGGGCGGAAGTTCTCCctgtgtcacgcaaggtcggtttgacct-----cagg--------cttctgt-ggcctcgatttcttca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1032886 109 + 81552678 CTCTGGGTAGA---CGTTTcacaggcaatggggtctaagag--ccgggcggaagttcttcctgtgtcacacaacatcggtttgactt-----cagg--------cttctgt-ggcctcgatttcttca i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1368198 109 + 108979918 CTCTGGGTAGA---CGTTTCACAGGCAACGGGGTCTAAGAG--CCGGGCGGAAGTTCTTCCTGTGTCACACAACATCGGTTAGACTT-----CAGG--------CTTCTGT-GGCCTCGATTTCTTCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1340381 109 - 111193037 CTCTGGGTAGA---CGTTTCACAGGCAACGGGGTCTAAGAG--CCGGGCGGAAGTTCTTCCTGTGTCACACAACATCGGTTTGACTT-----CAGG--------CTTCTGT-GGCCTCGATTTCTTCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1368723 109 + 3644372 CTCTGGGTAGA---CGTTTCACAGGCAACGGGGTCTAAGAG--CCGGGCGGAAGTTCTTCCTGTGTCACACAACATCGGTTTGACTT-----CAGG--------CTTCTGT-GGCCTCGATTTCTTCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1322792 109 - 10304083 CTCTGGGTAGA---CGTTTCACAGGCAACGGGGTCTAAGAG--CCGGGCGGAAGTTCTTTCTGTGTCACACAACATCGGTTTGACTT-----CAGG--------TTTCTGT-GGCCTCGATTTCTTCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1393932 109 - 107702431 CTCTGGGTAGA---CGTTTCACAGGCAATGGGGTCTAAGAG--CCGGGCAAAAGTTCTTCCTGTGTCACACAACATCGATTTGACTT-----CAGG--------CTTCTGT-GGCCTCAATTTCTTCA i chlSab2.chr14 C 0 I 11 s manLeu1.NW_012103754v1 871797 109 - 2200435 CTCTGGGTAGA---CGTTTCGCAGGCAACGGGGTCTAAGAG--CCGGGCGGAAGTTCTTTCTGTGTCACACAACATCGGTTTGACTT-----CAGG--------CTTCTGT-GGCCTCGATTTCTTCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1309861 109 - 13651311 CTCTGGGTAGA---CGTTTCACAGGCAACGGGGTCTAAGAG--CCGGGTGGAAGTTCTTCCTGTGTCACAGAACGTGGGTTTGACTT-----CAGG--------CTTCTGT-GGCCTCGATTTCTTCA i colAng1.NW_012118821v1 C 0 I 1 s calJac3.chr14 1317974 103 - 108792865 CTCCGGGCAGA---CGTCTCG--GGCAGTGGGGTCGGAGAG---CGGGCGGAAGTTCTTCC-GGGTCACACAACCTCGGGCCGACTT-----CCGG--------CTTCC---Ggcctccacttcctcc i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1170546 102 - 7082604 CTCTGCGCGGA---CGTCTCG--GGCCCGGGGGTCTGGGAG---CGGGCGGAAGCCCTTCC-GCGTCACACAGCCCCGGGCCGACTT-----CCGG--------CTTCCGT-GGCCTCCGCT---TCC i saiBol1.JH378218 M 2054 C 0 s otoGar3.GL873658 900669 92 + 5252280 CACTGGGTAGA-------------ACAGCAGGCTGGAA--------GGTACAAGTTCTTCCTATGTCCCATGGGCTTGGTTTGAAC------CAGG--------ctcctgg-agcctcagtttcctca i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1596273 128 + 4416731 CACTGAGTATAAACaatagcacgggctttagcgtcagatagacctgggaggaaattcttccttttccacataacattggttcgaccttcccacaagtttgttaactcctgcaagcatcagtttcctca i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I a score=8281.000000 s hg38.chr2_KI270774v1_alt 37570 1 + 223625 T s panTro5.chr2A 1315511 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1276193 1 + 114371477 T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1302053 1 + 1464242 t i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1032995 1 + 81552678 t i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1368307 1 + 108979918 T i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1340490 1 - 111193037 T i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1368832 1 + 3644372 T i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1322901 1 - 10304083 T i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 871906 1 - 2200435 T i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1318077 1 - 108792865 t i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1170648 1 - 7082604 T i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 900761 1 + 5252280 t i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1596401 1 + 4416731 t i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e chlSab2.chr14 1394041 11 - 107702431 I a score=4995.000000 s hg38.chr2_KI270774v1_alt 37571 2 + 223625 GT s panTro5.chr2A 1315512 2 + 111504155 GT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1276194 2 + 114371477 GT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1302054 2 + 1464242 gt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1032996 2 + 81552678 gt i nomLeu3.chr19 C 0 C 0 s manLeu1.NW_012103754v1 871907 2 - 2200435 GT i manLeu1.NW_012103754v1 C 0 I 2 s calJac3.chr14 1318078 2 - 108792865 gt i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1170649 2 - 7082604 GT i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 900762 2 + 5252280 ct i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1596402 2 + 4416731 ct i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=117510.000000 s hg38.chr2_KI270774v1_alt 37573 82 + 223625 GTGAAACAGGGA-----ATGTATCGTCAG-CTTGAAGTGTTGTTACAAGACTAAGTAAAATAACATGAGC-------AGGGCCCTGGCCAAGCCC--- s panTro5.chr2A 1315514 82 + 111504155 GTGAAACAGGGA-----ATGTATCGTCAG-CTTGAAGTGTTGTTACAAGACTAAGTAAAATAACATGAGC-------AGGGCCCTGGCCAAGCCC--- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1276196 82 + 114371477 GTGAAACAGGGA-----ATGTATCGTCAG-CTTGAAGTGTTGTTACAAGACTAAGTAAAATAACATGAGC-------AGGGCCCTGGCCAAGCCC--- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1302056 82 + 1464242 gtaaaacaggga-----atgtatcgtcag-cttgaagtgttgttacaagactaagtaaaataacatgAGC-------AGGGCCCTGACCAAGCCC--- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1032998 82 + 81552678 gtaaaacaggga-----atgtattgtcag-cttgaagtgttgttacaagactaagtaaaataacatgAAC-------AGGCCCCTGGCCAAGCCC--- i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1318080 81 - 108792865 gtgaaac-ggga-----atgaatcgtcagccttgaagtgttgctcccagactaagtaaggtaacgGAAGC-------CCGGCCCTG-CCCAGCGC--- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1170651 77 - 7082604 GTGAAACGGGGA-----AGGTGTCCTCAGCCTTGCGGTGTTGCCCCGGGACGAGGGAAGCCGAcggg------------ggccccg-cccggcgc--- i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 900764 95 + 5252280 gtaaaatatggagtgtggtgtggtgtctgccttggagggtcgttatgagattgagtaactcaacaGGTGCCAGCTGAAAAGCCCTTCCCAAACCC--- i otoGar3.GL873658 C 0 I 131 s dasNov3.JH576208 1596404 80 + 4416731 gtaaagttctaa-----aactagtgtctgccttgaagtggt-ttatgagcttaag----ataaaaggtgc-------aggtgcctg-cccagcacccg i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=151925.000000 s hg38.chr2_KI270774v1_alt 37655 113 + 223625 TACAACACATTT--CACACCGTGGTTCTTA---TTCATCTCTCAACGTTAG-------TGCCATTTATACCTTCCACTGTGTGACCT--GGGAAATCACGTAATCTTTCTGGTTTTCGTATTTGttt s panTro5.chr2A 1315596 113 + 111504155 TACAACACGTTT--CACACCGTGGTTCTTA---TTCATCTCTCAACGTTAG-------TGCCGTTTATACCTTtcactgtgtgacct--gggaaatcacgtcatctttctggTTTTCGTATTTGttt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1276278 113 + 114371477 TACAACACGTTT--CACACCGTGGTTCTTA---TTCATCTCTCAACGTTAG-------TGCCGTTTATACCTTtcactgtgtgacct--gggaaatcacgtcatctttctggTTTTCGTATTTGttt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1302138 112 + 1464242 TACAACACGTTT--CACACCGTGGTTCTTA----TCATCTCTCAACGTTAG-------TGCCGTTTATACCTTTCACTGTGTGACCT--GGGAAATCACGTAATCTTTCTGGTTTTCGTATTTGttt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1033080 116 + 81552678 TACAACACATTT--CACACAGTGGTTCTTATTCTTCATGTCTCAACGTTAG-------TGCCATTTATGCCTTTGACTGTGTGACCT--GGGAAATCACGTAATCTTTCTGGTTTTCATATTTGttt i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1318161 111 - 108792865 TGCAAAACGTTT--CACCGGGTGGTTCTCATTCTTCAC--CTCAGCGTTGG-------TGCTGCTCGTACCGTTCCC--GGTGACCT--GGGCGGTCATG-CATCTTTCCGGTTTTCAAACTTGTCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1170728 120 - 7082604 cgcAGAGCGTGT--CGCCCGGTGGTCCTGACCCTTCACCTCTCGGCGTTGGCGCTGTCCGCTGTCCGCGCCGCTCCC--CGTGACCT--GGGCGGCCACG-CGTCTTTGCGGCTTTCGAACTCGTTG i saiBol1.JH378218 C 0 C 0 s dasNov3.JH576208 1596484 120 + 4416731 tgcaaaatgtttaatacatgttagttttCATCCTTGCTTTCTTTATAATAG-------CACTGTTTAtaccattaactctgtgaccttgggaaaatcatttactctttcagggactcagttttcttt i dasNov3.JH576208 C 0 I 4869 e mm10.chr12 89950211 631 - 120129022 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 900859 131 + 5252280 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=100951.000000 s hg38.chr2_KI270774v1_alt 37768 93 + 223625 atgtgtggtaacaagcacatgacatgagatttactctcttaagtatttaggcgaagagttcagccgtgttaacgacatccacgttgctgtgca s panTro5.chr2A 1315709 93 + 111504155 atgtgtggtaacaagcacatgacatgagatttactctcttaagtatttaggtgaagagttcagccgtgttaacgacatccacgttgctgtgca i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1276391 93 + 114371477 atgtgtggtaacaagcacatgacatgagatttactctcttaagtatttaggtgaagagttcagccgtgttaacgacatccacgttgctgtgca i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1302250 93 + 1464242 atgtgtggtaacaagcacatgacatgagatttactctcttaagtatttaggtgaagagttcagccgtgttaacgacatccacattgctgtgca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1033196 93 + 81552678 atgtgtggtaacaagcacatgacatgagatttactctcttaagtatttaggtaaagagttcagccgtgttaactacatccccgttgctgtgca i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1318272 89 - 108792865 GTGTGTGGCAGGAAGCACGTGACGTGCGAGTCCCTCTTTTCAGTATCCAGGCGGAGG--TCAGGGGTGtcagt--cacccaggctggagtgca i calJac3.chr14 C 0 I 3323 s saiBol1.JH378218 1170848 50 - 7082604 GTGTGCGGAGGCCAGCACGTGACATG---------------------GAGGCGAAGACTTCGGGGCTGTGA---------------------- i saiBol1.JH378218 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 900859 131 + 5252280 I e dasNov3.JH576208 1596604 4869 + 4416731 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=208156.000000 s hg38.chr2_KI270774v1_alt 37861 207 + 223625 gctgatccctgcgcccctttatctcacatgaccgaaactgcacccgtggaacggcaactcccgtgtccccagctcctgcccctggcagccccatgctact-cccccttctgagagattgaccctgttagattccatatataagtgagataatgcagtgtttgttctgctgtgactggcttatgtcacttatcaccgtgtcttccagct s panTro5.chr2A 1315802 207 + 111504155 gctgatccctgcgcccctttatctcacatgaccgaaactgcacccgtggaacggcaactcccgtgtccccagctcccgcccctggcagccccatgctact-ctcccttctgagagattgaccctgttagattccatatataagcgagataatgcagtgtttgttctgctgtgactggcttatgtcacttatcaccgtgtcttccagct i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1276484 207 + 114371477 gctgatccctgcgcccctttatctcacgtgaccgaaactgcacccgtggaacggcaactcccgtgtccccagctcccgcccctggcagccccatgctact-ctcccttctgagagattgaccctgttagagtccatatataagcgagataatgcagtgtttgttctgctgtgactggcttatgtcacttatcaccgtgtcttccagct i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1302343 207 + 1464242 gctgatccctgcgcccctttatctcatgtgaccgaaactgcacccgtggaacggcacctcccctgtccccagctcctacccctggcagccccatgctact-ctcccttctgagagattgaccctgttagattccatatataagtgagataatgcagtgtttgttctgctgtgactggcttatttcacttatcaccgtgtcttccagct i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1033289 207 + 81552678 gctgatccctgcacccctttatctcacatgactgaaactgcacccgtggaacggcaagtcctgtgtccccagctcctgcccctggcagccccatgctact-ctcccttctgagagactgaccctgttagattccgtatataagggagataatgcagtgtttgttctgctgtgactggcttatttcacttatcaccatgtcttccagct i nomLeu3.chr19 C 0 C 0 s saiBol1.JH378218 1170898 171 - 7082604 ---GCTCCGTCCCCGCC------------------------------GGAGCGGCGACTCCCG-GCCCCCGACTcccgcccc-ggcggccgcgggcTCCTCCTCCCTCCCGAGACACCGAGCCCGTT-GCTTCCGTGCGTGAGTGAGAGCACGCAGGCGCTGTGCCGCCGTGGCTGGCTCGTCCC-CCTGCCGCCGCGTGtcccggct i saiBol1.JH378218 C 0 I 2787 e mm10.chr12 89950211 631 - 120129022 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 900859 131 + 5252280 I e dasNov3.JH576208 1596604 4869 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=4268592.000000 s hg38.chr2_KI270774v1_alt 38068 4778 + 223625 tcatccatgttgctgtcaacaataacagtgtatccttttttaaggctgaataacgtacctgcatacaccatacttctttatccattcttgctgttgactgatgtttaggctgtttccctatccttgctattgtgcgtagtgctgtaatgaacaggggagtgcaggtctctcttggagatactgattccattttcctcggatgcattcctagagaagggattgctaagtcatctcgtggttgtcttttaatttttttgagaaacccccatactattcatagtagctgcaccaatttacctttccacccacaatgtgcaagggttgcagcttctccacaccgttgtcaacacggtatcttctatgtggatgtgtgtttttacagcagttatcctgatggatgtgaggtagtgtctcagtgtggttttgatttgcatttccctaatgcttggtgaagtgaatgccttttcatgtttgctggccacttgaatgtcatctttagagaaatgtctattcaagtcccttgcgtattttgaaaatcaggttttttgttttttactattgagttgtaggagttatttatacattttggacattaacccctgattagatatggtttgtaggtattttctcctgtaccataggttgcattttcactcttctgattgtttcttctgttgtgcagaagcttttcagttgacgtggtcccaaatgtctacttttgcttttgttgcctgtggttatggtgtcatatccgtgaaaatcagtgccaagatcaatgtgatgaatcttttccactgttttcttctagaaattttatagtttcaggtcttatgtttaagtcgttaatctattttgagttgatttttctgtatggtgtaagataaaggtccaattttattcatttgcttctgaatatccagttttcacagcactatttattg-agagactgacctttccccactgtatagcgttagccctttgtggaagatcacctgacaatgtaggtataagtatatttctgggctctctattctgttccattggtttatatg--tgtctttagtaccataccattgattaccgtggctttgtaatatgttttagagtaaggaagtgagatgcctccaactttgttctttctcaacattgccctagctattcaggattttttgtggtttcatataaattttaggattttttctatgtttgtaaaaatgccattgagattttgatggatgttgcattgaatctatagatcactttggatggtatacacattttaacaatattaagacttacaattcattaacgtggtttttttt--atttacttgtgtctttaatttcttgcaatagtgcattatagttttcagtgtacaagtctttttgcctccttggttaagtttattcttaagtattttacttgttttgatgctattgtaagtgggttttttttttacttaatgtctattttggatcgtctgttgttagtgcgtagaaatgcaacttttttgtgtgtatcaattttgtcttctgaaattttgctgaatttttgtttattagttctaattttttagtggaatctttagggttatctacatataagattatgtttctacagagatagttttatgtcttcattttccaatttgaatgtcctttatttcttttcttgaccaattcctctggctaggatgtctagcactgtgttgaacagaaggggcaaaagtgggcataatcttagagaaaaagatttcagcctctcaccatagagtatgatgttagtcatggacttttgacatagtgcctttgttacgttcgggtaattttcttctattcctactttttattatttttataatgaaagactgttgagttttgttgaatgcttttcatgagtcttaaaatcatgtgatttgtacccctatgtcccagggataaattccacatatttgtagaatatgatccttttcatgtgctattgaattcagttgactagtagtgcctttgattgctttattataagggcaactgtggccttacataatgagtttggaagtgttctgtcctcttcagtttttgaaagaatttgacaaagattgatgttaatttttctttaatgtttcgtagaattccccagtggagccatctcttcctcatttttcttttgttggaatgtttttgattactgattcactctccttcctagttagtggtatgcttagattgtcggtttcttcatgattgactggtaggttgtatgtttctaggaatttatccaatttttttctaggtggtctaatttgttggtatataattgttcacagtagtctcataattgtttttttcttctgtggcatcatttatgtcttctctcatttctgactttgagttttctctatttttttcttagttatattagtgagcttgaacttctattttaaataaaataccatggtgtaaacaacagacatttatttcttatacttttggactctgtgaaatcaaagatcaaggtgctggtagattcagttcctgaggatggatttctttctctattgcagatgttcactttttttctgtgccctcacatgcagagacagtgagcactcaggtctcctttcctctacttacaaagactctaattccaatagcggaacccatcctcatgccctcatctaagtctaattatctctcaaaggtcttactccaagtatgattttattgtagtctaggacatcagcatatgaactttgggtgaacaaaacattcagtccgtaacattagtctagttaaatattgttgatcttttcaaaaaccaactcttagttttattgagttttgctattgtttttatgttctctctttcatttagttctgccccaatctttatttttttttttgtactaactttgaccttagtttgattttcttatctagtttcttaaggcataaagttatttggtttatttgaaatctttttcaacataggtgtttaccaccataaacttccctcttggcactgtttttgctgcatcccacaaatttatttatgctatgtttttgttttggtttgtctcaagatattttctagtatccctcttgatttcttctttgatccattggttccccaagagtgtgttgtttaatttccacatttttgtgctttttccaattttccttctgctattgatttctagcttcatgcttttgtagttgaaaaagatactaggtatgatgtcagtcttcttatatttgttaatatgtggcttgaagtctatggcctgtcctggagaatgctcctgtacacatttgagaagcttgtgttttctactgctgttagatggaatgttctgtttacctgttcagtctatagtgttgttcaaacttgttttcttattgttcttctatctggttgatctaagacttattaaaagggtgatactgaactctgctcctattgttgtgttgttgtctacttctaccttcagttttgtcaatgtttgtttcatacacaggttgaatatgccttatcccaaatgctttggaacagaagtatttcattttcagacttttttttggatttttgaatatttgtatatccataatgacatatcttggagatgggacccaaatctaaacacaaaatatatttgtttcatatataccaaatacacattgcctgaagataattatatatagtatttttaaaattttgtatatgaaacatagtttgtgttcaccgaactatcagaaatcaaaggtgtcaggtgt-gagttttctacttgaggtgtcatatcagtgctcaaaaagatttagatcttgaatcatttcaagatttcagattttttgattagggatgctcaacctttatttaggtgttctgatgttgggtgcatatttatttacagttgttctatcttcctggtggattgattctgttttcattataaaatatttttctttgtctcttgtaacaatt------------tctattttgtctaagtacagccaccctgcccttttgtttgcatgagatattttattccatctcttcacttttggcctatgtgtgtcttgaaatctaaagtgagtctcttgtacacaacatatagttaggtctcaatgtttttgttgttgtctatttcaccactctaatttctgtggatagagaAGCTGAGACTCAAAAATAATATTATTTATCAGCACATATGATGGCTTTTTACATGCTGGGAAAGATGACTGCTTTTACACAACATCAATATCCTTAAATTGTGAACTTCTATTTAGGTTCTAGTCCACCAATAAACCCACTGTCATTTTTGGTTATGTGCTTCCATAAACTAATCTTTATTTTATTTCTTTGCATGTTTTTTCTCTTTCATTAGAATGCTGCCTTTCTGTAGTAATATTGAGAAACATTTTACTTTGTCCATATCTTCTTTCCATTTAACAATATTACCAAAAACAAGCAAACAAAGAAACTAAAGCTCAATTTATTCAACCAAAAATGGTTATTTATCTTCATTTCTTTACATTTATGGGCACTGAACAAATTCTATCCCATTTTTCCCATAGGAAAAAAAAAGCACATTAAATGATTGAAAGAAGTTATCtgtattcattttctatcgatgcttaacaaattaacacaaatatagtagattagagacacacatttatcctcttacagttctctaagaacttgtctcttagggctaaaatcaaggtgttggctgctttctcctgcagcctctgggggacagtctgttttcttggcttt---------------CTTTGCCCT s panTro5.chr2A 1316009 4791 + 111504155 tcatccatgttgctgtcaacaataacagtgtatccttttttaaggctgaataacgtacctgcatacaccacacttctttatccattcttgctgttgactgatgtttaggctgtttccctatcctggctattgtgagtagtgctgtaatgaacaggggagtgcaggtctctcttggagatactgattccattttcctcggatgcattcctagagaagggattgctcagtcatctcgtggttgccttttaatttttttgagaaacccccatactattcatagtagctgcaccaatttacctttccacctacaatgtgcaagggttgcagcttctccacaccattgtcaacacggtattttctatgtggatgtgtgtttttacagcagttatcctgatggatgtgaggtagtgtctcagtgtggttttgatttgcatttccctaatgattggtgatgtgaatgctttttcatgtttgctggccacttgaatgtcatttttagagaaatgtctattcaagtcccttgcgtattttgaaaatcaggttttttgttttttactattgagttgtaggagttatttatacattttggacattaacccctgattagatatggtttgtaggtattttctcctataccataggttgcattttcactcttctgattgtttcttctgttgtgcagaagcttttcagttgacgtggtaccaaatgtctacttttgcttttgttgcctgtggttatggtgtcatatccatgaaaatcagtgccaagatcaatgtgatgaatcttttccactgttttcttctagaaattttatagtttcaggtcttatgtttaagtcgttaatctattttgaattgacttttctgtatggtgtaagataaaggtccaattttattcatttgcttctgaatatccagttttcacagcactatttgttg-agagactgacctttccccactgtatagcattagccctttgtggaagatcacctgacaatgtaggtataagtatatttctgggctctctattctgttccattggtttatatg--tgtctttagtaccataccattgattactgtggctttgtaatatgttttagagtaagaaagtgagatgcctccaactttgttctttctcaacattgccctagctattcaggattttttgtggtttcatataaattttaggattttttctatgtctgtaaaaatgccattgagattttgatggatattgcattgaatctatagatcactttgggtagtatacacattttaacaatattaagacttacaattcattaacgtgtttttttttttatttgcttgtgtctttaatttcttgcaacagtgcattatagttttcagtgtacaagtctttttgcctccttggttaagtttattcttaagtattttacttgttttgatgctattgtaagtgggtttttttttt-cttaatgtctattttggatcgtctgttgttagtgcgtagaaatgcaacttttttgtgtgtatcaattttgtcttctgaaattttgctgaatttttgtttattagttctaattttttagtggaatctttagggttacctacatataagattatgtttctacagagatagttttatgtcttcattttccaatttgaatgtcctttatttcttttcttgaccaattcctctggctaggatgtctagcgctgtgttgaacagaaggggcaaaagtgggcataatcttagagaaaaagatttcagcctctcaccatagagtatgatgttagtcatggacttt-gacatagtgcctttgttacgttcgggtaattttcttctattcctactttttattatttttataatgaaagactgttgagttttgttgaatgcttttcatgagtcttaaaatcatgtgatttttatccctatgtcccagggataaattccacatatttgtagtatatgatccttttaatgtgctattgaattcagttgactagtagtgcctttgactgctttattataagggcaactgtggccttacataatgagtttggaagtgttctgtcctcttcagtttttgaaagaatttgacaaagattgatgttaatttttcttcaatgtttggtagaattccccagtggagccatctcttcctcatttttcttttgttggaatgtttttgattactgattcactctccttcctagttagtggtatgcttagattgtcattttcttcatgattgactggtaggttgtatgtttctaggaatttatccaatttttttctaggtggtctaatttgttggtatataattgttcacagtagtctcataattgtttttttcttctgtggcatcatttatgtcttctctcatttctgactttgagttttctctatttttttcttagttatattagtgagcttgaacttctattttaaataaaataccatggtgtaaacaacagacatttatttcttatacttttggactctgtgaaatcaaagatgaaggtgctggtagattcagttcctgaggatggatttctttctctattgcagatgttcactttttttctgtgccctcacatgcagagagagtgagcactcaggtctcctttcctctacttacaaagactctaattccaatagcggaacccatcctcatgccctcatctaagtctaattatctctcaaaggtcttactccaagtatgattttattgtagtttaggacatcagcatatgaactttgggtgaacaaaacattcagtccataacattagtctagttaaatattcttgatcttttcaaaaaccaactcttagttttattgagttttgctattgtttttatgttctctctttcatttagttctgctccaatctttattttttttg--gtactaactttgaccttagtttgattttcttatctagtttcttaaggcataaagttatttggtttatttgaaatctttttcaacataggtgtttaccaccataaacttccctcttggcactgtttttgctgcatcccacaaatttatttatgctatgtttttgttttggtttgtctcaagatattttctagtatccctcttgatttcttctttgatccattggttccccaagagtgtgttgtttaatttccacatttttgtgctttttccagttttccttctgctattgatttctaccttcatgcttttgtagttgaaaaagatactaggtatgatgtcagtcttcttatatttgttaatatgtggcttgaagtctatggtctatcctggagaatgctcctgtacacatttgagaagcttgtgttttctattgctgttagatggaatgttctgtatacctgttcagtctatagtgttgttcaaacttgttttcttactgttcttctatctggttgatctaagacttattaaaagggtgatactgaactctgctcctattgttgtgttgttgtctacttctaccttcagttttgtcaatgtttgtttcatacacaggttgaatatgccttatcccaaatgctttggaacagaagtatttcattttcagacttttttttggatttttgaatatttgtatatccataatgacatatcttggagatgggacccaaatctaaacacaaaatatatttgtttcatatataccaaatacacattgcctgaagataattatatatagtatttttaaaattttgtatatgaaacatagtttgtgttcaccgaactatcagaaatcaaaggtgtcaggtgt-gagttttctacttgaggtgtcatatcagtgctcaaaaagatttagatcttgaatcatttcaagatttcagattttttgattagggatgctcaacctttatttaggtgttctgatgttgggtgcatatttatttacagttgttctatcttcctggtggattgattctgttttcattataaaatatttttctttgtctcttgtaacaatt------------tctattttgtctaagtacagccaccctgcccttttgtttgtatgagatattttatcccatctcttcacttttggcctatgtgtgtcttgaaatctaaagtgagtctcttgtacacaacatatagttgggtctcaatgtttttgttgttgtctatttcaccactctaatttctgtggatagAGAAGCTGAGACTCAAAAATAATATTATTTATCAGCACATATGATGGCTTCTTACATACTGGGAAAGATGACTGCTTTTACACAACATCAATATCCTTAAATTGCGAACTTCTATTTAGGTTCTAGTCCACCAATAAACCCACTGTCATTTTTGGTTATGTGCTTCCATAAACTAATCTTTATTTTATTTCTTTGCATGTTTTTTCTCTTTCATTAGAATGCTGCCTTTCTGTAGTAATATTGAGAAACATTTTACTTTGTCCATATCTTCTTTCCATTTAACAATATTACCAAAAACAAGCAAACAAAGAAACTAAAGCTCAATTTATTCAACCGAAAATGGTGATTTATCTTCGTTTCTTTACATTTATGGGCACTGAACAAATTCTATCCCATTTTTCCCATAGGAAAAAAAAAGTACATTAAATGATTGAAAGAAGTTATCtgtattcattttctatcgatgcttaacaaattaacacaaatatagtagattagagacacacatttatcctcttacagttctctaagaacttgtctcttagggctaaaatcaaggtgttggctgctttctcctgcagcctctgggggacagtctgttttcttggcttttccagcatctggaggcTTTGCCCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1276691 4786 + 114371477 tcatccatgttgctgtcaacaataacagtgtatccttttttaaggctgaataacgtacctgcatacaccacacttctttatccattcttgctgttgactgatgtttaggctgtttccctatcctggctattgtgagtagtgctgtaatgaacaggggagtgcaggtctctcttggagatactgataccattttcctcggatgcattcctagagaagggattgctcagtcatctcgtggttgccttttaatttttttgagaaacccccatactattcatagtagctgcaccaatttacctttccacctacaatgtgcaagggttgcagcttctccacaccattgtcaacacggtattttctatgtggatgtgtgtttttacagcagttatcctgatggatgtgaggtagtgtctcagtgtggttttgatttgcatttccctaatgattggtgatgtgaatgctttttcatgtttgctggccacttgaatgtcatttttagagaaatgtctattcaagtcccttgcgtattttgaaaatcaggttttttgttttttactattgagttgtaggagttatttatacattttggacattaacccctgattagatatggtttgtaggtattttctcctataccataggttgcattttcactcttctgattgtttcttctgttgtgcagaagcttttcagttgacgtggtaccaaatgtctacttttgcttttgttgcctgtggttatggtgtcatatccatgaaaatcagtgccaagatcaatgtgatgaatcttttccactgttttcttctagaaattttatagtttcaggtcttatgtttaagtcgttaatctattttgaattgacttttctgtatggtgtaagataaaggtccaattttattcatttgcttctgaatatccagttttcacagcactatttgttg-agagactgacctttccccactgtatagcattagccctttgtggaagatcacctgacaatgtaggtataagtatatttctgggctctctattctgttccattggtttatatg--tgtctttagtaccataccattgattactgtggctttgtaatatgttttagagtaaggaagtgagatgcctccaactttgttctttctcaacattgccctagctattcaggattttttgtggtttcctataaattttaggattttttctatgtctgtaaaaatgccattgagattttgatggatattgcattgaatctatagatcactttgggtagtatacacattttaacaatattaagacttacaattcattaacgtgttttttta---atttacttgtgtctttaatttcttgcaacagtgcattatagttttcagtgtacaagtctttttgcctccttggttaagtttattcttaagtattttacttgttttgatgctattgtaagtgggttttttttt--cttaatgtctattttggatcgtctgttgttagtgcgtagaaatgcaacttttttgtgtgtatcaattttgtcgtctgaaattttgctgaatttttgtttattagttctaattttttagtggaatctttagggttacctacatataagattatgtttctacagagatagttttatgtcttcattttccaatttgaatgtcctttatttcttttcttgaccaattcctctggctaggatgtctagtgctgtgttgaacagaaggggcaaaagtgggcataatcttagagaaaaagatttcagcctctcaccatagagtatgatgttagtcatggacttttgacatagtgcctttgttacgttcgggtaattttcttctattcctactttttattatttttataatgaaagactgttgagttttgttgaatgcttttcatgagtcttaaaatcatgtgatttttatccctatgtcccagggataaattccacatatttgtagtatatgatccttttaatgtgctattgaattcagttgactagtagtgcctttgactgctttattataagggcaactgtggccttacataatgagtttggaagtgttctgtcctcttcagtttttgaaagaatttgacaaagattgatgttaatttttcttcaatgtttggtagaattccccagtggagccatctcttcctcatttttcttttgttggaatgtttttgattactgattcactctccttcctagttagtggtatgcttagattgtcattttcttcatgattgactggtaggttgtatgtttctaggaatttatccaa-ttttttctaggtggtctaatttgttggtatataattgttcacagtagtctcataattgtttttttcttctgtggcatcatttatgtcttctctcatttctgactttgagttttctctatttttttcttagttatattagtgagcttgaacttctattttaaataaaataccatggtgtaaacaacagacatttatttcttatagttttggactctgtgaaatcaaagatgaaggtgctggtagattcagttcctgaggatggatttctttctctattgcagatgttcactttttttctgtgccctcacatgcagagagagtgagcactcaggtctcctttcctctacttacaaagactctaattccaatagcggaacccatcctcatgccctcatctaagtctaattatctctcaaaggtcttactccaagtatgattttattgtagtttaggacatcagcatatgaactttgggtgaacaaaacattcagtccataacattagtctagttaaatattcttgatcttttcaaaaaccaactcttagttttattgagttttgctattgtttttatgttctctctttcatttagttctgctccaatctttattttttttt--gtactaactttgaccttagtttgattttcttatctagtttcttaaggcataaagttatttggtttatttgaaatctttttcaacataggtgtttaccaccataaacttccctcttggcactgtttttgctgcatcccacaaatttatttatgctatgtttttgttttggtttgtctcaagatattttctagtatccctcttgatttcttctttgatccattggttccccaagagtgtgttgtttaatttccacatttttgtgctttttccaattttccttctgctattgatttctaccttcatgcttttgtagttgaaaaagatactaggtatgatgtcagtcttcttatatttgttaatatgtggcttgaagtctatggtctatcctggagaatgctcctgtacacatttgagaagcttgtgttttctattgctgttagatggaatgttctgtatacctgttcagtctatagtgttgttcaaacttgttttcttattgttcttctatctggttgatctaagacttattaaaagggtgatactgaactctgctcctattgttgtgttgttgtctacttctaccttcagttttgtcaatgtttgtttcatacacaggttgaatatgccttatcccaaatgctttggaacagaagtatttcattttcagacttttttttggatttttgaatatttgtatatccataatgacatatcttggagatgggacccaaatctaaacacaaaatatatttgtttcatatataccaaatacacattgcctgaagataattatatatagtatttttaaaattttgtatatgaaacatagtttgtgttcaccgaactatcagaaatcaaaggtgtcaggtgt-gagttttctacttgaggtgtcatatcagtgctcaaaaagatttagatcttgaatcatttcaagatttcagattttttgattagggatgctcaacctttatttaggtgttctgatgttgggtgcatatttatttacagttgttctatcttcctggtggattgattctgttttcattataaaatatttttctttgtctcttgtaacaatt------------tctattttgtctaagtacagccaccctgcccttttgtttgtatgagatattttatcccatctcttcacttttggcctatgtgtgtcttgaaatctaaagtgagtctcttgtacacaacatatagttgggtctcaatgtttttgttgttgtctatttcaccactctaatttctgtggatagagaAGCTGAGACTCAAAAATAATATTATTTATCAGCACATATGATGGCTTCTTACATACTGGGAAAGATGACTGCTTTTACACAACATCAATATCCTTAAATTGCGAACTTCTATTTAGGTTCTAGTCCACCAATAAACCCACTGTCATTTTTGGTTATGTGCTTCCATAAACTAATCTTTATTTTATTTCTTTGCATGTTTTTTCTCTTTCATTAGAATGCTGCCTTTCTGTAGTAATATTGAGAAACATTTTACTTTGTCCATATCTTCTTTCCATTTAACAATATTACCAAAAACAAGCAAACAAAGAAACTAAAGCTCAATTTATTCAACCGAAAATGGTGATTTATCTTCGTTTCTTTACATTTATGGGCACTGAACAAATTCTATCCCATTTTTCCCATAGG-AAAAAAAAGTACATTAAATGATTGAAAGAAGTTATCtgtattcattttctatcgatgcttaacaaattaacacaaatatagtagattagagacacacatttatcctcttacagttctctaagaacttgtctcttagggctaaaatcaaggtgttggctgctttctcctgcagcctctgggggacagtctgttttcttggctttcccagcatctggaggcTTTGCCCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1302550 4781 + 1464242 tcatccatgttgctgtcaa-aataacagtgtatccttttttaaggctgaataacgtacctgcatacaccatacttctttatccattcttgctgctgactgatgtttaggctgtttccctatcctggctattatgagtagtgctgtaatgaacaggggagtgcaggtctctcttggagatactgattccgttttcctcggatgcattcctagagaagggattgctaagtcatctcgtggttgccttttaattttgttgagaaacccctatactattcatagtagctgcaccaatttacctttccacccacaatgtgcaagggttgcagcttctccacaccattgtcaacacggtattttctatgtggatgtgtgtttttacagcagttatcctgatggatgtgaggtagtgtctcagtgtggttttgatttgcatttccctaatgattggtgatgtgaatgctttttcatgtttgctggccacttggatgtcatttttagagaaatgtctattcaagtcccttgcgtattttgaaaatcaggttttttgttttttactattgagttgtaggagttatttatacattttggacattaa-ccctgattagatatggtttgtaggtattttctcctacaccataggttgcattttcactcttctgattgtttcttctgttgtgcagaagcttttcagttgacgtggtaccaaatgtctacttttgcttttgttgcctgtggttatggtgtcatatccatgaaaatcagtgccaagatcaatgtgatgaatcttttccactgttttcttctagaaattttgtagtttcaggtcttatgtttaagtcattaatctattttgagttgatttttctgtatggtgtaagataaaggtccaattttattcatttgcttctgaatatccagttttcacagcactatttattg-agagactgacctttccccactgtatagcgttagccctttgtggaagatcacctgacaatgtaggtataagtatatttctgggctctctattctgttccattggtttatatg--tgtctttagtaccataccattgattactgtggctttgtaatatgttttagagtaaggaagtgagatgcctccaactttgttctttctcaacattgccctagctattcagga-tttttgtggtttcatataaattttaggattttttctatgtctgtaaaaatgccattgagattttgatggatgttgcattgaatctatagatcactttgggtagtatacacattttaataacattaagacttacaattcattaacgtggttttttttt-atttacttgtgtctttaatttcttgcaacaatgcattatagttttcagtgtacaagtctttttgcctccttggttaagtttattcttaagtattttacttgttttgatgctattgtaagtgggtttttttttt-cttaatgtctattttggatcgtctgttgttagtgcgtagaaatgcatcttttttgtgtctatcaattttgtcttctgaaattttgctgaatttttgttta----ttctaattttttagtggaatctttagggttatctacatataagattatgtttctacagagatagttttatgtcttcattttccaatttgaatgtcctttatttcttttcttgaccaattcctctggctagggtgtctagcgctgtgttgaacagaaggggcaaaagtgggcataatcttagag-aaaagatttcagcctctcaccatagagtatgatgttagtcatggacttttgacatagtgcctttgttacgttcgggtaattttcttctattcctactttttattatttttataatgaaagactgttgagttttgttgaatgcttttcatgagtcttaaaatcatgtgatttttatccctatgtcccagggataaattccacatatttgtagtatatgatccttttcatgtgctattgaattcagttgactagtagtgcctttgattgctttattataaaggcaactgtggccttacataatgagtttggaagtgttctgtcctcttcagtttttgaaagaatttgacaaaaattgatgttaatttttgtttaatgtttggtagaattccccagtggagccatctcttcctcatttttcttttgttggaatgtttttgattactgattcactctccttcctagttagtggtatgcttagattgttggtttcttcatgattgactggtaggttgtatgtttctaggaatttatccaatttttttctaggtggtctaatttgttggtatataattgttcacagtagtctcataattgtttttttctcctgtggcatcatttatgtcttctctcatttctgactttgagttttctctatttttttcttagttatattagtgagcttgaacttctattttaaataaaataccatggtgtaaacaacagacatttatttcttatacttttggactctgtgaaatcaaagatcaaggtgctggtagattcagttcctgaggatggatttctttctctattgcagatgttcactttttttctgtgccctcacatgcagagagagtgagcactcaggtctcctttcctctacttacaaagactctaattccaatagcggaacccatcctcatgccctcatctaagtctaattatctcccaaaggtcttactccaagtatgattttattgtggtttaggacatcagcatatgaactttgggtgaacaaaacattcagtccataacattagtctagttaaatattgttgatcttttcaaaaaccaactcttagttttattgagttttgctattgtttttatgttctctctttcatttagttctgctccaatctttattttttttt--gtactagctttgaccttagtttgattttcttatctagtttcttaaggcataaagttatttggtttatttgaaatctttttcaacataggtgtttaccaccataaacttccctcttggcactgtttttgctgcatcccacacatttatttatgctatgtttttgttttggtttgtctcaagatattttctagtatccctcttgatttcttctttgatccattggtt-cccaagagtgtgttgtttaatttccacatttttgtgctttttcaaattttccttctgctattgatttctagcttcatgcttttgtagttgaaaaagatactgggtatgatgtcagtcttcttatatttgttaatatgtggcttgaagtctatggcctgtcctggagaatgctcctgtacacatttgagaagcttgtgttttctactgctgttagatggaatgttctgtatacctgttcagtctatagtgttgttcaaacttgttttcttattgttcttctatctggttgatctaagacttattgaaagggtgatactgaactctgctcctattgttgtgttgttgtctacttctaccttcagttttgtcaatgtttgtttcatacacaggttgaatatgccttatcccaaatgctttggaacagaagtatttcattttcagacttttttttggatttttgaatatttgtatatccataatgacatatcttagagatgggacccaaatctaaacacaaaatatatttgtttcatatataccaaatacacattgcctgaagataattatatatagtatttttaaaattttgtatatgaaacatagtttgtgttcactgaactatcagaaatcaaaggtgtcaggtgt-gagttttctacttgaggtgtcatatcagtgctcaaaaagatttagatcttgaatcatttcaacatttcagattttttgattagggatgctcaacctttatttaggtgttctgatgttgggtgcatatttatttacagttgttctatcttcctggtggattgattctgttttcattataaaatatttttctttgtctcttgtaacaatt------------tctattttgtctaagtacagccaccctgcccttttgtttgcatgagatattttattccatctcttcacttttggcctatgtgtgtctcgaaatctaaagtgagtctcttgtacacaacatatagttgggtctcaacgtttttgttgttttctatttcaccactctaatttctgtggatagAGAAGCTGAGACTCAAAAATAGTATTATTTGTCAGCACATATGATGGCTTTTTACATGCTGGGAAAGATGACTGCCTTTACACAACATCAATATCCTTAAATTGCGAACTTCTATTTAGGTTCTAGTCCACCAATAAACCCACTGTCATTTTTGGTTATGTGCTTCCATAAACTAATCTTTATTTTATTTCTTTGCATGTTTTTTCTCTTTCATTAGAATGCTGCCTTTCTGTAGTAATATTGAGAAGCATTTTACTTTGTCCATATCTTCTTTCCATTTAACAATATTACCAAAAACAAGCAAACAAAGAAACTAAAGCTCAATTTATTCAACCAAAAATGGTTATTTATCTTCATTTCTTTAGATTTATGGGCACTGAACAAATTCTATCCCATTTTTCCCATAGGAAAAAAAAAGTACATTAAATGATTGAAAGAAGTTATCtgtattcattttctagcgatgcttaacaaactaacacaaatatagtagattagagacacacatttatcctcttacagttctctaagaacttgtctcttagggctaaaatcaaggtgttggctgctttcttctgcagcctc-gggggacagtctgttttcttggctttcccagcatctggaggcTTTGCCCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1033496 4788 + 81552678 tcatccatgtcgctgtcaacaataacag-gtatccttttttgaggttgaataacgtacctgcatacaccatacttccttatccattcttgctattgactgacgtttaggctctttccctatcctggctattgtgagtagtgctgtaatgaacaggggagtgcaggtctctcttggagataccgattccattttccttggatgcattcctagacatgggattgctgagtcatctcgtggttgcattttaatatttttgagaaacccctatactattcatagtggctgcaccaatttacctttccacccacaatgttcaagggttgcagcttctccacgtcattgtcaacacggtattttctatgtggatgtgtgtttttacggcagtcttcctgatggatgtgaggtagtgtctcagtgtggttttgatttgcatttccctaatgattggtgatgtgaatgctttttcatgtttgctggccacttggatgtcatttttagagaaatgtctattcaagtcccttgcgtattttgaaaatcaggttggttgttttttactgttgagttgtaggagttatttatacattttggacattaacccctgattagatacggtttgtaagtattttctcctgtaccataggttgcattttcactcttctgattgtttcttctgtcgtgcagaag-gtttcagctgacgtggtcccaaatgtctacttttgcttttgttgcctgtggttatggtgtcatatccatgaaaatcagtgccaagatcaatgtgatgaatctttcccactgttttcttctagaaattttatagtttcaggtcttatgtttaagtcgttaatcaattttgagttgatttttctgtatggtgtaagataaaggtccagttttattcatttgcttctgaatatccagttttcacagcactatttgttgaagagactgacctttccccactgtgtggcattagccctttgtggaagatcacctgacaatgtaggtataagtatatttctgagctctctattctgttccattggtttatatgtctgtctttagtaccataccattgattactgtggctttgtaatatgttttagagtaaggaagtgagttgcctccaactttgttctttctcaacattgccctggctattcaggattttttgtggtttcagatagattttaggattttttctatgtctgtaaaaatgcctttgagattttgatggatattgcattgaatctatagatcactttgagtagtatacacattttaacaatattaagacttacagttcattaacgtggttttttttt-atttacttgtgtctttaatttcttgcaacagtgcattatagtttttggtgtacaagtctttttgcctccttggttcagtttattcttaagtattttacttgttttgatgctattgcaagtgggtttttttt---cttaatgtctattttggatcgtctgttgttagtgtgtacaaatgcaccttttttgtgtgtatcaattttgtcttctgaaattttgctgaa-ttttgttta----ttctaactttttagtggaatctttagggttatctacgtataagattacgtttctacagagatagttttatgtcttcattttccaatttgaatgtcctttatttcttttcttgaccaattcctctggctaggatgtctagcactgtgttgaacagaaggggcaagagtgggtataatcttagagaaaaagatttcagcctctcaccatagagtatgatgttagttatggacttttgacgtagggcctttgttacattcaggcaattttcttctattcctactttttattatttttataatgaaagactgttgagttttgttgaatgcttttcatgagtcttaaaatcatgtgatttttatccctacgtcccagggataaattccacatatttgtagtatatgatccttttaatgtgctattgaattcagttgactagtagtgcctttgattgctttattataagggtaatt-tggccttacataatgagtttggaagtgttctgtcctcttcagtttttgaaagaatttgacaaagattggtgtgaatttttctttaatgtttggtagaattccccagtggagccatctcttccgcatttttcttttgttggaatgtttttgattactgattcactctccttcctagttagtggtatgcttagattgtctgtttcttcatgattgcctggtaggttgtatgtttctaggaatttatccat-ttttttctaggttatctaatttgttggtatataattgttcacagtagtctcatagttgtttttttcttctgtggtatcatttatgtcttctctcatttctgactttgagttttctcta-ttttttcttagttatattagtgagcttgaacttctattttaaataaaataccatagtgtaaacaacagacatttatttcttatacttttggacactataaagtcaaagatcaaggtgctggtagatt--gttcctgaggatggatttctttctctgttgcagatgttcactttttttctgtgtcctcacatgcagagagagtgagcactcaggtctcctttcctctgcttgcaaagattctaattccaatagtggaccccatcctcatgccctcatctgaatctgattatctcccaaaggtcttactccaagtatgattttactgtagtttaggacatcagcatatgaactttgggtgaacaaaacattcagtccgtaacactagtctagttaaatattgttgatcttttcaaaaaccaactcttagttttattgagtcttgctattgtttttatgttctctctttcatttagttctgctccaatctttatgtttttt---gtactaactttgaccttagtttgatcttcctatctagtttcttaaggcataaagttatttggtttatctgaaatctttttcaacataggtgtttaccaccagaaacttccctcttggcactgtttttgctgcatcccacaaatttatttatgctatatttttgttttggtttgtctcaagatattttctagtatccctcttgatttcttctttgatccattggttccccaagagtgtgttgtttaatttccacatttttgtgatttttcgaattttccttctgttattgatttctagctttatgcttttatagttgaaaaggatactaggtgtgatgtcagtcttcttatatttgttaatatgtgacttgaagtctatggcctatcctggaggatgctcctgtacacatttgagaagcttgtgttttctactgctgttagatggaatgttctgtatacctgttcagtctatagtgttgttcaaacttgttttctcattgttcttctatctggttgatctaatccttattaaaagggtgatactgaactctgctcctattgttgtgttgttgtctgcttctaccttcagttttgtcaatgtttgtttcatacacaggttgaatatcccttatcccaaatgctttggaacagaagtatttcattttcaaaa-tttttttggatttttgaatatttgtatatccataatgacatatcttggagatgggacccaaatctaaacacaaaatatatttgtttcatatataccaaatacacattgcttgaagataattatatatagtatttttaaaattttgtatatgaaacatagtttgtgttcactgaactatcagaaagcaaaggtgtcaggtgtggagtttcctacttgaggtatcatatcagtgctcaaaaagatttagatcttgaagcatttc-agatttcagattttttgattatggatgctcaacctttatttaggtgttctgatgttgggtgcatatttatttacagttgttctatcttcctggtggattgattctgttttcattataaaatatttttctttgtctcttgtaacaatttctaacttaaagtctattttgtctaagtacagccaccctgcccttttgtttgcatgggatattttattccatctcttcacttttggcctatgtgtgtctcgaaatctaaagtgagtctcttgtacacaacatatagttgggtctcaatgtttttgttgttgtctatttcaccactctaatttctgtcGATAGAGAAGCTGAGACTCAAAAATAATATTATTTATCAGCACATATGATGGCTTTTTACATGCTGGGAAAGATGACTGCTTTTACACAACATCAATATCCTTAAATTGTGAACTTCTATTTAGGTTCTAGTCCACCAATAAACCCATTGTCATTTTTAGTTATGTGCTTCCATAAACTAATCTTTATTTTATTTCTTTGCATGTTTTTTCTCTTTCATTAGAATGCTGCCTTTCTATAGTAACATTGAGAAGCATTTTACTTTGTCCATATCTTCTTTCCATTTAACAATATTACCAAAAACAAGCAAACAAAGAAACTAAAGCTCAATTTATTCAACCAAAAATGGCTATTTATCTTCATTTCTTTACATTTATGGGCAAAGAACACATTCTTTCCCATTTTTCCCATAG--AAAAAAAAGTACATTAAATTATTGAAAGAAGTTATCtgtattcattttctatcgatgcttaacaaattaacacaaatatagtagactagagacacacatttatcgtcttacagttctctaagaacttgtctcttagggctaaaatcaaggtgttggctgctttctcctgcagcctcttggggacagtctgttttcttggctttcccagcatctggaggcTTTGCCCT i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 900859 131 + 5252280 I e dasNov3.JH576208 1596604 4869 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=113251.000000 s hg38.chr2_KI270774v1_alt 42846 107 + 223625 TGTGCTCTGAGCTCACCTGTGCCAGAAAGCTCCAGCCAC-CGCAGCTTTGGAAGCATGCCTCCCTCTCTGCCCTCAGAGTGGAGGATCTTGTATGAAGCCTGGATCAC s panTro5.chr2A 1320800 107 + 111504155 TCTGCTCTGAGCTCACCTGTGCCAGAAACCTTCAGCCAC-CGCAGCTTTGGAAGCATGCCTCCCTCTCTGCCCTCAGGGTGGAGGATCTTGTATGAAGCCTGGATCAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1281477 107 + 114371477 TCTGCTCTGAGCTCACCTGTGCCAGAAACCTCCAGCCAC-CGCAGCTTTGGAAGCATGCCTCCCTCTCTGCCCTCAGGGTGGAGGATCTTGTATGAAGCCTGGATCAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1307331 107 + 1464242 TGTGCTCTGAGCTCACCTGTGCCAGAAAGCTCCAGCCAC-CGCAGCTTTGGAAGCATGCCTCCCTCTCTGCCCTCAGGGTGGAGGATCTTGTATGAAGCCTGGATCAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1038284 107 + 81552678 TGTGCTCTGAGCTCACCTGTGCCAGAAAGCTCCAGCCAC-AGCAGCTTTGGAAGCATGCCTCCCTCTCTGCCCTCAGGGTGGAGGATCTTGTATGAAGCCTGGATCAC i nomLeu3.chr19 C 0 C 0 s dasNov3.JH576208 1601473 91 + 4416731 tgtgtcctgggct-----------gtcagcttcagccacatgctgtgttggacgcatccctccctcacaaatc------tgcaggatcttgtattgagcctggaccat i dasNov3.JH576208 I 4869 I 7 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 900859 131 + 5252280 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=294003.000000 s hg38.chr2_KI270774v1_alt 42953 242 + 223625 CAGCCCAGCCTGTTCAGGAGAGCTCTCTCTGGGGTGTGTTCCTTCCAGCAGCACAGCTTAGAAGGAAAATATAG--------GG-TGGAGGTTCAAAAGG------ATCAAGATATTTTTATTTCCAGAAGGTTATTGGACTCTTTATGCACTG--GCACCTGCCGCAACAAGTGAGGGGAAGCTCCTTG--CCTTTTCTATTTCCCTTATATTTGTGTGACTA-----AAAGAGGCTACTCTAGTGTTTTTAATTTCCTTTTCTT s panTro5.chr2A 1320907 242 + 111504155 CAGCCCAGCCTGTTCAGGAGAGCTCTCTCTGGGGTGTGTTCCTTCCAGCAGCACAGCTTAGAAGGAAGGTATAG--------GG-TGGAGGTTCAAAAGG------ATCAAGATATTTTTATTTCCAGAAGGTTATTGGACTCTTTATGCACTG--GCACCTGCTGCAACAAGTGAGGGGAGGCTCCTTG--CCTTTTCTATTTCCCTTATATTTGTGTGACTA-----AAAGAGGCTACTCTAGTGTTTTTAATTTCCTCTTCTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1281584 242 + 114371477 CAGCCCAGCCTGTTCAGGAGACCTCTCTCTGGGGTGTGTTCCTTCCAGCAGCACAGCTTAGAAGGAAGGTATAG--------GG-TGGAGGTTCAAAAGG------ATCAAGATATTTTTATTTCCAGAAGGTTATTGGACTCTTTATGCACTG--GCACCTGCTGCAACAAGTGAGGGGAAGCTCCTTG--CCTTTTctatttcccttatatttgtgtgacta-----aaagaggctactctagtgTTTTTAATTTCCTCTTCTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1307438 242 + 1464242 CAGCCCAGCCTGTTCAGGAGAGCTCTCTCTGGGGTGTGTTCCTTCCAGCAGCACAGCTTAGAAGGAAGGTATAG--------GG-TGGAGGTTCAAAAGG------ATCAAGATATTTTTATTTCCAGAAGGTTATTGGACTCTTTATGCACTG--GCACCTGCTGCAACAAGTGAGGGGAAGCTCCTTG--CCTTTTCTATTTCCCTTATATTTGTGTGACTA-----AAAGAGGCTACTCTAGTGTTTTTAATTTCCTTTTGTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1038391 242 + 81552678 CAGCCCAGCCTGTTCAGGAGAGCTCCCTCTGGGGTGTGTTCCTTCCAGCAGCACAGCTTAGAAGGAAGGTATGG--------GG-TGGAGGTTCAAAAGG------ATCAAGATATTTTTATTTCCAGAAGGTTATTGGGCTCTTTATGCACTG--CCACCTGCTGCAACAAGTGAGGGGAAGCTCCTTG--CCTTTTCTATCTCCCTTATATTTGTGTGACTA-----AAAGAAGCTACTCTAGTGTTTTTAATTTCCTTTTCTT i nomLeu3.chr19 C 0 C 0 s otoGar3.GL873658 900990 251 + 5252280 CACCCCAGCCTGTCCAGGAGAATTCCCGCTAACATGTGCTCTTTCTACCAGCCCATCTCAAACAG-GGACATGG--------GGCTGGAGGTGTAAGAGGGCTTATAGTGAGATCCTCTTATTTCTAGAAGGCCCTTGGGCTCTCCATGT-CAG--ACACCTGCTGATACCAG-GGGAGGAAGCTGCCCA--GCTTATGCATTTGCCTTATATTTACATAACTATTATTAAAGAGGAAAAGCTAGTGTTTCGCACTTCCTTTTCtt i otoGar3.GL873658 I 131 I 271 s dasNov3.JH576208 1601571 244 + 4416731 cagcccaggctATTCTGGGGAATTCTCTGTTAGAGGCATCATCTCCATGAACAAAACTTAGGTTAGCACTACAGTTTTTCTCAG-AAGAGTTTT----GG------GTCTAGAACTTTTCATTTCCAGAAGGCC-TTGATCTCTTTATGCATAGAAAAACCTGCTTT--CTTGTCAAAGGAAGTGGCTATACCCTCATctatttggcttgtagttgcataacta-----aaagaggtgattctagtgaact---tttccttttctt i dasNov3.JH576208 I 7 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=3374.000000 s hg38.chr2_KI270774v1_alt 43195 24 + 223625 aaaaacacaaacaaacaaaaaaaa s panTro5.chr2A 1321149 22 + 111504155 aaaaaaacaaacaac--aaaaaaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1281826 21 + 114371477 aaaaaaacaaacaac---aaaaaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1307680 18 + 1464242 AAAAAAACAAAC------AAACAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1038633 18 + 81552678 aaaaaaaaaaaa------aaagaa i nomLeu3.chr19 C 0 C 0 s dasNov3.JH576208 1601815 14 + 4416731 gaatattgaaatga---------- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 901241 271 + 5252280 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=775571.000000 s hg38.chr2_KI270774v1_alt 43219 727 + 223625 aaaGTCTGTCCCTAGGGGATTTTCTTTCCTTCTCACT-CAGACAGAAGCAGCAAACATACGGTGTCTGATTTCA--CCCCCCTACATC--CAGCATCATACACAGATGAGCAAACCCTTCACTCAGGAAGGGGATGAGTGATTTTTCTTTCAATATTTGTAGAGATGGAGTCTCT-AAGTAAGAGAGCAGTGTCTGCTTGGCCTACCATTGGAGCCTGATTCTGCATAACGATTCCAA----------------------------------TCACCT---------------GCGTGT--CCCAGTGTTTTTCTGTCTTACTTAAGAGAGTTCTTTTGGAGATCCCACCCACAGGCT--CTGACCTTATGGA---ATATTCAAAGCTGATGCAGTCCCCAGCGCTGTCTCTTCCATTCCACTAGCGT----------------CCATCAACTCAGTCAG--CTCAGACACAGCCCTGAGC-AGTAAACTGCGTCCTTGGGGCCTTTGGTCCA-AGCCTCAGTGCTTTTCCTAGCTTTGCCTTCTGTGCCTCAGCCA-CTGGAT---TCAGATTCCATTGTCCCATCTGTGGGGGCCAACGTGAAGCTTTAAATAAA---TGTGTAAACA---TCTTTTATTTGTTACAGCCTGTGACATTATGATTGCA-------------TCATTCTCCACCAACAATAA-GAAAATTTACATTACAATGATTTGTCCCATTGAGTGTGTAGCACGAAATTCTC-----------ATGGAATTTAATAAATGGTCAT-CAAGTTGACCCA-TTTAAAAAAAAAAAAACTCACAGAATTTTGAAAACCAAAGCA s panTro5.chr2A 1321171 720 + 111504155 aaaGTCTGTCCCTAGGGGATTTTCTTTCCTTCTCACT-CAGACAGAAGCAGCAAACATATGGTGTCTGATTTCA--CCCCCCGACATC--CAGCATCATACACAGATGAGCAAACCCTTCACTCAGGAAGGGGATGAGTGATTTTTCTTTCAATATTTGTAGAGATGGAGTCTCT-AAATAAGAGAGCAGTGTCTGCTTGGCCTACCATTGGAGCCTGATTCTGCATAACGATTCCAA----------------------------------TCACCT---------------GCGTGT--CCCAGTGGTTTTCTGTCTTACTTAAGAGAGTTCTTTTGGAGATCCCACCCACAGGCT--CTGACCTTATGGA---ATATTCAAAGCTGATGCAGTCCCCAGCGCTGTCTCTTCCATTCCACTAGCGT----------------CCATCAACTCAG------CTCAGACACAGCCCTGAGC-AGTAAACTGCGTCCTTGGGGCCTTTGGTCCA-AGCCTCAGTGCTTTTTCTAGCTTTGCCTTCTGTGCCTCAGCCA-CTGGAT---TCAGATTCCATTGTCCCATCTGTGGGGGCCAACGTGAAGTTTTAAATAAA---TGTGTAAACA---TCTTTTATTTCTTACAGCCTGTGACATTATGATTGCA-------------TCATTCTCCACCAACAATAA-GAAAATTTACATTACAATGATTTGTCCCATTGAGTGTGTAGCACGAAATTCTC-----------ATGGAATTTAATAAATGGTCAT-CAAGTTGACCCA-TTTAAAAAAAAAA---CTCACAGAATTTTGAAAACCAAAGCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1281847 719 + 114371477 aaaGTCTGTCCCTAGGGGATTTTCTTTCCTTCTCACT-CAGACAGAAGCAGCAAACATACGGTGTCTGATTTCA--CCCCCCGACATC--CAGCATCATACACAGATGAGCAAACCCTTCACTCAGGAAGGGGATGAGTGATTTTTCTTTCAATATTTGTAGAGATGGAGTCTCT-AAATAAGAGAGCAGTGTCTGCTTGGCCTACCATTGGAGCCTGATTCTGCATAACGATTCCAA----------------------------------TCACCT---------------GCGTGT--CCCAGTGGTTTTCTGTCTTACTTAAGAGAGTTCTTTTGGAGATCCCACCCACAGGCT--CTGACCTTATGGA---ATATTCAAAGCTGATGCAGTCCCCAGCGCTGTCTCTTCCATTCCACTAGCGT----------------CCATCAACTCAG------CTCAGACACAGCCCTGAGC-AGTAAACTGCGTCCTTGGGGCCTTTGGTCCA-AGCCTCAGTGCTTTTTCTAGCTTTGCCTTCTGTGCCTCAGCCA-CTGGAT---TCAGATTCCATTGTCCCATCTGTGGGGGCCAACGTGAAGTTTTAAATAAA---TGTGTAAACA---TCTTTTATTTCCTACAGCCTGTGACATTATGATTGCA-------------TCATTCTCCACCAACAATAA-GAAAATTTACATTACAATGATTTGTCCCATTGAGTGTGTAGCACGAAATTCTC-----------ATGGAATTTAATAAATGGTCAT-CAAGTTGACCCA-TTTAAAAAAAAA----CTCACAGAATTTTGAAAACCAAAGCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1307698 724 + 1464242 AAAGTCTGTCCCTAGGGGATTTTCTTTCCTTCTCAGT-CAGACAGAAGCAGCAAACATATGGTGTCTGATTTCACCCCCCCCCACATC--CAGCATCATACACAGATGAGCAAACCCTTCACTCAGGAAGGGGATGAGTGATTTTTCTTTCAATATTTGTAGAGATGGAGTCTCT-AAATAAGAGAGCAGTGTCTGCTTGGCCTACCATTGGAGCCTGATTCTGCATAACGATTCCAA----------------------------------TCACCT---------------GCGTGT--CCCAGTGGTTTTCTGTCTTACTTAAGAGAGTTCTTTTGGAGAT-CCACCCACAGGCT--CTGACCTTATGGA---ATATTCAAAGCTGATGCAGTCCCCAGCGCTGTCTCTTCCATTCCACTAGCGT----------------CCATCAACTCAGTCAG--CTCAGACACAGCCCTGAGC-AGTAAACTGCGTCCTTGGGGCCTTTGGTCCA-AGCCTCAGTGCTTTTTCTAGCTTTGCCTTCTGTGCCTCAGCCA-CTGGAT---TCAGATTCCATTGT-CCATCTGTGGGGCCCAACGTGAAGCTTTAAATAAA---TGTGTAAACA---TCTTTTATTTGTTACAGCCTGTGACATTATGATTGCA-------------TCATTCTCCACCAACAATAA-GAAAATTTACATTACAATGATTTGTCCCATTGAGTGTGTAGCACGAAATTCTC-----------ATGGAATTTAATAAATGGTCAT-CAAGTTGACCCA-TTTAAAAAAAAAA---CTCACAGAATTTTGAAAACCAAAGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1038651 757 + 81552678 aaaGTCTGTCCCTGGGGGATTTTCTTTCCTTCTCACT-CAGACAGAAGCAGCAAACGTACGGTGTCTGATTTCA--CCCCCCCACATC--AAGCATCATACACAGATGAGCAAACCCTTCACTCAGGAAAGGGATGAGTGATTTTTCTTTCAGTATTTGTAGAGATGGAGTCTCT-AAATAAGAGAGCAGTGTCTGCTTGGCCTGCCATTGGAGCCAGATTCTGCATAACAGTTCCAATCACCTGCGTGTCCCAGTGGTTTTCCAGTTCCAGTCACCT---------------GCGTGT--CCCAGTGGTTTTCTGTCTTACTTAAGAGAGTTCTTTTGGAGATCCCACCCACAGGTT--CTGACCTTATGGA---ATATTCAAAGCTGATGCAGTCCCCAGCGCTGTCTCTTCCATTCCACTAGCGT----------------CCATCAACTCAGTCAG--CTCAGATACAGCCCTGAGC-AGTAAACTGGGTCCTTGGGGCC-TTGGTCCA-AGCCTCAGTGCTTTTTCTAGCTTTGCCTTCTGTGCCTCAGCCA-TTGGAT---TCAGATTCTATTGTCCTATCTGTGGGGGCCAAAGTGAAACTTTAAATAAA---TGTGTAAATA---TCTTTTATTTGTAACAGCCTGTGACATTTTGATTGCA-------------TCATTCTCCACCAACAATAA-GAAAATTTACATTATAATGATTTGTCCCATTGAGTGTGCGGCACGAAATTCTC-----------ATGGAATTTAATAAATGGTCAT-CAAGTTGCCCCA-GTTAAAAAAAAAG---CTCACAGAATTTTGAAAACCAAAGCA i nomLeu3.chr19 C 0 C 0 s otoGar3.GL873658 901512 726 + 5252280 AAGATCTGTCCCCGGGGGATTTTGTTGCCTCTTCAGTATGGACAGAAACAGCAAGCACACACCATCTGATCACA--CCTGCCCAGGTTAACAGCACCCTGCCCAGATGAGCAGACTGGCCATTCAGGCAGGGTATGGGTGGTTTTTCTTTCAGTA--AGAAAGGAAAGAGCCCCTAAAATAAAATAATTGAGCCTTCAGGGCATGGCATTAGATGCCTATTCTGGGGAATAGTTCCTG----------------------------------TCACCCCCTCT--TCTGCCAGGTAAGT--CCCAGCAGCTTTCAGCCCTGCTAGAGATGGTG----------------CCACAAGCG--CTCGCCTCACAGA--CATACTCAAGGCCAGTCCTGTGTCTGG-GCTGTTTCCACCACTCCAC-AGTGT----------------CCATCAGCTCCATCAG--C-CAAGCAGGGCCTTACAG-GGCAAACTGAGTCCCTGGGTCCTTTGGTCAAGGGCCTCAGGGCCTTT-CTAGGTTTG-CTTCTGTGCTTGGGACAGCTGG-----CCAGATTCCATCATATGAACCTTGGGGACCAATATGAA-CTTGGAACAGA---TGTGTGAACATTTTTTTTTATTTTTAATGGCCTATAACTTCATGATTGCATCAACAGTATACCTCATTCTCCACCGATATTGC--AGGATGTCCATTATAGTGGTCTGTGCCATGGAGTCT----CATAGCCATGCT-----------GCAGCACTTGTCAAGGGTTCATCCAAGATGCCTCACTTTAGAAAGTAAA---ATC-----AGCTTGAGGAGCAAAGCA i otoGar3.GL873658 I 271 I 1616 s dasNov3.JH576208 1601829 740 + 4416731 ------ttgccctaggtgattttctgtcctcctctctctatatagaagaagTAAGCAAATAATCTGTAGTTGTA--CCTTACCAGATA--TAGCTTTATATACATATGAGGAAACTGAGGGACCAG---AGAACTGTGTAATTTTTCTTTTAATATCTGTAAAGAAAACACCTCTAAAATAA------------------------------AGGTAGGTTTGGGAGAACAATTCCAA----------------------------------TCACTTACTCTTCTCTGCTCTGCATGTTACCAGACCTTTCTCTCTCTTGGATTTAAGAGTCACTTTCAGGACCAAGCTTGCAAGGTGGCTGGTCCTACAGTCACAGATTCAAAGCCAGTTTCCTCCCTGACACTGTTTCCACCAAGACCAAAGTATCTTTATAAAATTTTCCCCACTGCCTCTGTCATTCCTCAAATTTTTCCCTGCACAAGTAAACTAAATCTTTTAGTTGTTTGTTGAA-GGACTGAACTCTAGT-CTGAATTTGTCCATTTTGCCATAGACA-CTGAATCTCTCAGATTTCGTTGTCCTGTCTT---GAATCAAGATACAACTTGGAATACATGTTGTGTGATTC---TCTTTCAGTTATAATAGCCTGTGGCTTTGTGATAGAT-------------TACTTTTGTTCCATTAAGAAAGGAAATTTTGAACATAATTGTTTGGTCCATCTACTATATATTTCTAAGTTCTTTTAGTTCTATAGTAGCATTTCCTAAATAATTCTCCAATATGGCCCA-TTTATAAAAA------gccaaataagtttggaaaagaaagcc i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=114107.000000 s hg38.chr2_KI270774v1_alt 43946 123 + 223625 TGGCAAATCATTATTGGAGACAGACAGTGCAATTAACACAGTGAGGTGGCTGAGAAGTTCC-----ACAATAGCAAAAGTATCCCGCCTTCTTCAATCTACTT-TTCTCCAAATCTATGCAAACAAAGA s panTro5.chr2A 1321891 123 + 111504155 TGGCAAATCATTATTGGAGACAGACAGTGCAATTAACAGAGTGAGGTGGCTGAGAAGTTCC-----ACAATAGCAAAAGTATCCCGCCTTCTTCAATCTACTT-TTCTCCAAATCTATGCAAACAAAGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1282566 123 + 114371477 TGGCAAATCATTATTGGAGACAGACAGTGCAATTAACAGAGTGAGGTGGCTGAGAAGTTCC-----ACAATAGCAAAAGTATCCCGCCTTCTTCAATCTACTT-TTCTCCAAATCTATGCAAACAAAGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308422 127 + 1464242 TGGCAAATCATTATTGGAGACAGACAGTGCAATTAACACAGTGAGGTGGCTGAGAAGTTCCAGCCTACAATAGCAAAAGTATCCCGCCTTCTTCAATCTACTT-TTCTCCAAATCTATGCAAAC-AAGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1039408 119 + 81552678 TGGCAAATCACTCTTGG----AGATGGTGCAATTAACACAGTGAGGTGGCTGAGAAGTTCC-----ACAGTAGCAAAAGTATCCCGCTTTCTTCAACCTACTT-TTCTCCAAATCTATGCATACAAAGA i nomLeu3.chr19 C 0 C 0 s dasNov3.JH576208 1602569 119 + 4416731 tgctgtgtcactattgaagatgctcaacataattaacac--caaaaagactacaaaatctt-----gcaataaagaaagtttt---ctctctttaatctattgattatccaaacttatataagcataga i dasNov3.JH576208 C 0 I 31 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=61119.000000 s hg38.chr2_KI270774v1_alt 44069 68 + 223625 GTGTTTAAAAAATATAACTTTTTAATATCAAACACATTTTGGGAAATGCTGCTGTGTTGATACCATCA s panTro5.chr2A 1322014 68 + 111504155 GTGTTTAAAAAATATAACTTTTTAATATCAAACACATTTTGGGAAATGCTGCTGTGTTGATATCATCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1282689 68 + 114371477 GTGTTTAAAAAATATAACTTTTTAATATCAAACACATTTTGGGAAATGCTGCTGTGTTGATATCATCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308549 68 + 1464242 GTGTTTAAAAAATATAACTTTTTAATATCAAACACATTTTGGGAAATGCTGCTGTGTTGATACCATCA i gorGor5.CYUI01015607v1 C 0 I 39 s nomLeu3.chr19 1039527 68 + 81552678 GTGTTTAAAAAATATAACTTATTACTATCAAACACATTTTGGGAAATGCTGCTGTGTTGATACCATCA i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=33337.000000 s hg38.chr2_KI270774v1_alt 44137 39 + 223625 CATTTCAGTAAAACTTCCATGAAAGTCACCGACGCTGAG s panTro5.chr2A 1322082 39 + 111504155 CATTTCAGTAAAACTTCCATGAAAGTCACCGACGCTGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1282757 39 + 114371477 CATTTCAGTAAAACTTCCATGAAAGTCACCGACGCTGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308656 39 + 1464242 CATTTCAGTAGAACTTCCATGAAAATGACCGACACTGAG i gorGor5.CYUI01015607v1 I 39 T 78 s nomLeu3.chr19 1039595 39 + 81552678 CATTTCAGTAGAACTTCCATGAAGGTCACCGATGCTGAG i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=147580.000000 s hg38.chr2_KI270774v1_alt 44176 178 + 223625 CATTTCAGTAGAACTTCCACGAAGGTCACCGATGCTGAGCATTTCAGTAGAACTTCCATGAAAGTCACCGACGCTGAGCATTTCAGTAGAACTTCCGTGAAGGTCACCGATGCTGAGCATTTCAGTAGAACTTCCATGAAGGTCACCGATGCTGAGCATTTCAGTAGAACTTCCATGA s panTro5.chr2A 1322121 178 + 111504155 CATTTCAGTAGAACTTCCATGAAGGTCACCGACGCTGAGCATTTCAGTAGAACTTCCATGAAGGTCACCAGTGCTGAGCATTTCAGTAGAACTTCCATGAAGGTCACCAGTGCTGAGCATTTCAGTAGAACTTCCATTAAAGTCACGGATGCTGAGCATTTCAGTAGAACTTCCATGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1282796 178 + 114371477 CATTTCAGTAGAACTTCCACGAAGGTCACCGATGCTGAGCATTTCAGCAGAACTTCCATGAAGGTCACCGATGCTGAGCATTTCAGTAGAACTTCCATTAAAGTCACGGATGCTGAGCATTTCAGTAGAACTTCCATGAAGGTCACCGACGCTGAGCATTTCAGTAGAACTTCCATGA i panPan2.chr2A C 0 T 78 s gorGor5.CYUI01015607v1 1308617 178 + 1464242 CATTTCAGTAGAACTTCCATGAAGGTCACCGATGCTGAGCATTTCAGTAGAACTTCCATGAAAATGACCGACACTGAGCATTTCAGTAGAATTTCCATGGAAGTCACCAACGCTGAGCATTTCAGTAGAACTTCCATGAAAGTCACCGATGCTGAGCATTTCCGTAGAACTTCCAtga i gorGor5.CYUI01015607v1 T 78 C 0 s nomLeu3.chr19 1039634 178 + 81552678 CATTTCAGTAGCACTTCCATGAAGGTCACCAACACTGAGCATTTCAGTAGAACTTCCATGAAGGTCACCAATGCTGAGCATTTCAGTAGCACTTCCATGAGAGTCACCAACACTGAGCATTTCAGTAGAACTTCCATGAGAGTCACCGACACTGAGCATTTCAGTAGAACTTCCATGA i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=3242.000000 s hg38.chr2_KI270774v1_alt 44354 4 + 223625 AAGT s panTro5.chr2A 1322299 4 + 111504155 AGGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1282896 4 + 114371477 AAGT i panPan2.chr2A T 78 C 0 s gorGor5.CYUI01015607v1 1308795 4 + 1464242 aagt i gorGor5.CYUI01015607v1 C 0 T 78 s nomLeu3.chr19 1039812 4 + 81552678 AAGT i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=42365.000000 s hg38.chr2_KI270774v1_alt 44358 52 + 223625 CATGGATGCTGAGCATTTCAGTAGAACTTCCATGAAAGTCATTGATGCTGAG s panTro5.chr2A 1322303 52 + 111504155 CACCGATGCTGAGCATTTCAGTAGAACTTCCATGAAAGTCACCAACGCTGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1282900 52 + 114371477 CACGGATGCTGAGCATTTCAGTAGAACTTCCATGAAGGTCACCGACGCTGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308721 52 + 1464242 CACCAACGCTGAGCATTTCAGTAGAACTTCCATGAAAGTCACCGATGCTGAG i gorGor5.CYUI01015607v1 T 78 T 156 s nomLeu3.chr19 1039816 52 + 81552678 CACCGATGCTGAGCATTTCAGTAGAACTTCCATGAAGGTCACTGACACTAAG i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=30606.000000 s hg38.chr2_KI270774v1_alt 44410 39 + 223625 CATTTCAGTAGAACTTCCATGAGAGTCACT--GAGGCTGAG s panTro5.chr2A 1322355 39 + 111504155 CATTTCAGTAGAACTTCCATGAAGGTCACC--AACGCTGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1282952 39 + 114371477 CATTTCAGTAGAACTTCCATGAAAGTCACC--GACGCTAAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308617 39 + 1464242 CATTTCAGTAGAACTTCCATGAAGGTCACC--GATGCTGAG i gorGor5.CYUI01015607v1 T 156 T 39 s nomLeu3.chr19 1039868 41 + 81552678 CATTTCAGTAGAACTTCCGTGAAGGTCACCGAGATGCTGAG i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=31828.000000 s hg38.chr2_KI270774v1_alt 44449 39 + 223625 CATTTCAGTAGAACTTCCATGAAAGTCACTGATGCTGAG s panTro5.chr2A 1322394 39 + 111504155 CATTTCAGTAGAACTTCCATGAAAGTCACTGATGCTGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1282991 39 + 114371477 CATTTCAATAGAACTTCCATGAAGGTCACCGACACTGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308617 39 + 1464242 CATTTCAGTAGAACTTCCATGAAGGTCACCGATGCTGAG i gorGor5.CYUI01015607v1 T 39 T 39 s nomLeu3.chr19 1039909 38 + 81552678 CATTTCAGTAGAACTT-CATGAAAGTCACTGATGCTGAG i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=31899.000000 s hg38.chr2_KI270774v1_alt 44488 39 + 223625 CATTTCAGTAGAACTTCCATGAAGGTCACCGACGCTGAG s panTro5.chr2A 1322433 39 + 111504155 CATTTCAGTAGAACTTCCATGAAAGTCATTGATGCTGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1283030 39 + 114371477 CATTTCAGTAGAACTTCCAtgaaagttaccaacgctgag i panPan2.chr2A C 0 T 273 s gorGor5.CYUI01015607v1 1308617 39 + 1464242 CATTTCAGTAGAACTTCCATGAAGGTCACCGATGCTGAG i gorGor5.CYUI01015607v1 T 39 T 39 s nomLeu3.chr19 1039947 39 + 81552678 CATTTCAGTAGAACTTCCAGGAAGGTCACTGACACTGAG i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=163566.000000 s hg38.chr2_KI270774v1_alt 44527 195 + 223625 CATTTCAGCAGAACTTCCATGAGAGTCACCAATGCTGAGCATTTCAGTAGAACTTCCATGAAGGTCACCGACGCTGAGCATTTCAGCAGAACTTCCATGAGAGTCACCAATGCTGAGCATTTCAGTAGAACTTCCATGAAAGTCACCGACGCTGAGCATTTCAGTAGAACTTCCATGAAAGTCACCGACGCTGAG s panTro5.chr2A 1322472 195 + 111504155 CATTTCAGTAGAACTTCCATGAAGGTCACCGATGATGAGCATTTCAGTAGAACTTCCATGAGAGTCACCAATGCTGAGCATTTCAGTAGAACTTCCATGAAAGTCACCGACGCTGAGCATTTCAGTAGAACTTCCATGAAGGTCACCGACGCTGAGCATTTCAGTAGAACTTCCATGAAAGTCACCAACGCTGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1282796 195 + 114371477 CATTTCAGTAGAACTTCCACGAAGGTCACCGATGCTGAGCATTTCAGCAGAACTTCCATGAAGGTCACCGATGCTGAGCATTTCAGTAGAACTTCCATTAAAGTCACGGATGCTGAGCATTTCAGTAGAACTTCCATGAAGGTCACCGACGCTGAGCATTTCAGTAGAACTTCCATGAAAGTCACCGACGCTAAG i panPan2.chr2A T 273 C 0 s gorGor5.CYUI01015607v1 1308617 195 + 1464242 CATTTCAGTAGAACTTCCATGAAGGTCACCGATGCTGAGCATTTCAGTAGAACTTCCATGAAAATGACCGACACTGAGCATTTCAGTAGAATTTCCATGGAAGTCACCAACGCTGAGCATTTCAGTAGAACTTCCATGAAAGTCACCGATGCTGAGCATTTCCGTAGAACTTCCAtgaaagttaccgacgctgag i gorGor5.CYUI01015607v1 T 39 T 117 s nomLeu3.chr19 1039986 195 + 81552678 CATTTCAGTAGAACTTCGGTGAAAGTCACCAACGCTGAGCGTTTCAGTAGAACTTCCATGAAAGTCACCGACGCTGAGCATTTCAGCAGAACTTCCATGAAGGTCACCAATGCTGAGCATTTCAGTAGAACTTCCATGAAAGTCACCGACACTGAGCATTTCAGTAGAACTTCCATGAGAGTCACCGACGCTGAG i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=7026.000000 s hg38.chr2_KI270774v1_alt 44722 8 + 223625 CATTTCAG s panTro5.chr2A 1322667 8 + 111504155 CATTTCAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1282991 8 + 114371477 CATTTCAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308695 8 + 1464242 CATTTCAG i gorGor5.CYUI01015607v1 T 117 C 0 s nomLeu3.chr19 1040181 8 + 81552678 CATTTCAG i nomLeu3.chr19 C 0 T 117 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=24735.000000 s hg38.chr2_KI270774v1_alt 44730 31 + 223625 CAGAACTTCCATGAGAGTCACCAATGCTGAG s panTro5.chr2A 1322675 31 + 111504155 TAGAACTTCCATGAAGGTCACCAACGCTGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1282999 31 + 114371477 TAGAACTTCCATGAAGGTCACCGACACTGAG i panPan2.chr2A C 0 T 273 s gorGor5.CYUI01015607v1 1308703 31 + 1464242 TAGAATTTCCATGGAAGTCACCAACGCTGAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1040072 31 + 81552678 CAGAACTTCCATGAAGGTCACCAATGCTGAG i nomLeu3.chr19 T 117 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=65894.000000 s hg38.chr2_KI270774v1_alt 44761 78 + 223625 CATTTCAGTAGAACTTCCATGAAAGTCACCAACGCTGAGCATTTCAGTAGAACTTCCATGAAGGTCACCGATGCTGAG s panTro5.chr2A 1322706 78 + 111504155 CATTTCAGTAGAACTTCCATGAAGGTCACCGATGATGAGCATTTCAGTAGAACTTCCATGAGAGTCACCAATGCTGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1282757 78 + 114371477 CATTTCAGTAAAACTTCCATGAAAGTCACCGACGCTGAGCATTTCAGTAGAACTTCCACGAAGGTCACCGATGCTGAG i panPan2.chr2A T 273 C 0 s gorGor5.CYUI01015607v1 1308734 78 + 1464242 CATTTCAGTAGAACTTCCATGAAAGTCACCGATGCTGAGCATTTCCGTAGAACTTCCAtgaaagttaccgacgctgag i gorGor5.CYUI01015607v1 C 0 T 39 s nomLeu3.chr19 1040103 78 + 81552678 CATTTCAGTAGAACTTCCATGAAAGTCACCGACACTGAGCATTTCAGTAGAACTTCCATGAGAGTCACCGACGCTGAG i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=31283.000000 s hg38.chr2_KI270774v1_alt 44839 39 + 223625 CATTTCAGTAGAACTTCCATGAAAGTCACGGATGCTGAG s panTro5.chr2A 1322784 39 + 111504155 CATTTCAGTAGAACTTCCATGAAAGTCACCGACGCTGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1282835 39 + 114371477 CATTTCAGCAGAACTTCCATGAAGGTCACCGATGCTGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308773 39 + 1464242 CATTTCCGTAGAACTTCCAtgaaagttaccgacgctgag i gorGor5.CYUI01015607v1 T 39 T 156 s nomLeu3.chr19 1040181 39 + 81552678 CATTTCAGTAGAACTTCCAtgaaagtcacggattccgag i nomLeu3.chr19 C 0 T 311 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=28950.000000 s hg38.chr2_KI270774v1_alt 44878 39 + 223625 CATTTCAGTAGAACTTCCATGAAAGTCATTGATGCTGAG s panTro5.chr2A 1322823 39 + 111504155 CATTTCAGTAGAACTTCCATGAAGGTCACCGACGCTGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1282874 39 + 114371477 CATTTCAGTAGAACTTCCATTAAAGTCACGGATGCTGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308656 39 + 1464242 CATTTCAGTAGAACTTCCATGAAAATGACCGACACTGAG i gorGor5.CYUI01015607v1 T 156 C 0 s nomLeu3.chr19 1039909 38 + 81552678 CATTTCAGTAGAACTT-CATGAAAGTCACTGATGCTGAG i nomLeu3.chr19 T 311 T 352 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=64221.000000 s hg38.chr2_KI270774v1_alt 44917 78 + 223625 CATTTCAGTAGAACTTCCATGAGAGTCACTGAGGCTGAGCATTTCAGTAGAACTTCCATGAAAGTCACTGATGCTGAG s panTro5.chr2A 1322862 78 + 111504155 CATTTCAGTAGAACTTCCACGAAGGTCACTGACGCTGAGCATTTCAGTAGAACTTCCATGAGAGTCACCGATGCTGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1282913 78 + 114371477 CATTTCAGTAGAACTTCCATGAAGGTCACCGACGCTGAGCATTTCAGTAGAACTTCCATGAAAGTCACCGACGCTAAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308695 78 + 1464242 CATTTCAGTAGAATTTCCATGGAAGTCACCAACGCTGAGCATTTCAGTAGAACTTCCATGAAAGTCACCGATGCTGAG i gorGor5.CYUI01015607v1 C 0 T 156 s nomLeu3.chr19 1039595 78 + 81552678 CATTTCAGTAGAACTTCCATGAAGGTCACCGATGCTGAGCATTTCAGTAGCACTTCCATGAAGGTCACCAACACTGAG i nomLeu3.chr19 T 352 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=63715.000000 s hg38.chr2_KI270774v1_alt 44995 78 + 223625 CATTTCAGTAGAACTTCCATGAAGGTCACCGACGCTGAGCATTTCAGCAGAACTTCCATGAGAGTCACCAATGCTGAG s panTro5.chr2A 1322940 78 + 111504155 CATTTCAGTAGAACTTCCACGAAGGTCACCGACACTGAGCATTTCAGTAGAACTTCCACGAAGGTCACTGACGCTGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1282991 78 + 114371477 CATTTCAATAGAACTTCCATGAAGGTCACCGACACTGAGCATTTCAGTAGAACTTCCAtgaaagttaccaacgctgag i panPan2.chr2A C 0 T 234 s gorGor5.CYUI01015607v1 1308617 78 + 1464242 CATTTCAGTAGAACTTCCATGAAGGTCACCGATGCTGAGCATTTCAGTAGAACTTCCATGAAAATGACCGACACTGAG i gorGor5.CYUI01015607v1 T 156 C 0 s nomLeu3.chr19 1039673 78 + 81552678 CATTTCAGTAGAACTTCCATGAAGGTCACCAATGCTGAGCATTTCAGTAGCACTTCCATGAGAGTCACCAACACTGAG i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=32086.000000 s hg38.chr2_KI270774v1_alt 45073 39 + 223625 CATTTCAGTAGAACTTCCATGAAGGTCACCGACGCTGAG s panTro5.chr2A 1323018 39 + 111504155 CATTTCAGCAGAACTTCCATGAGAGTCACCGATGCTGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1282835 39 + 114371477 CATTTCAGCAGAACTTCCATGAAGGTCACCGATGCTGAG i panPan2.chr2A T 234 C 0 s gorGor5.CYUI01015607v1 1308695 39 + 1464242 CATTTCAGTAGAATTTCCATGGAAGTCACCAACGCTGAG i gorGor5.CYUI01015607v1 C 0 T 117 s nomLeu3.chr19 1039751 39 + 81552678 CATTTCAGTAGAACTTCCATGAGAGTCACCGACACTGAG i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=31794.000000 s hg38.chr2_KI270774v1_alt 45112 39 + 223625 CATTTCAGCAGAACTTCCATGAGAGTCACCAATGCTGAG s panTro5.chr2A 1323057 39 + 111504155 CATTTCAGTAGAACTTCCGTGAAGGTCACCAGTGCTGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1282874 39 + 114371477 CATTTCAGTAGAACTTCCATTAAAGTCACGGATGCTGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308617 39 + 1464242 CATTTCAGTAGAACTTCCATGAAGGTCACCGATGCTGAG i gorGor5.CYUI01015607v1 T 117 T 39 s nomLeu3.chr19 1039790 39 + 81552678 CATTTCAGTAGAACTTCCATGAAAGTCACCGATGCTGAG i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=56473.000000 s hg38.chr2_KI270774v1_alt 45151 66 + 223625 CATTTCAGTAGAACTTCCATGAAAGTCACCGACGCTGAGCATTTCAGTAGAACTTCCATGAAAGTC s panTro5.chr2A 1323096 66 + 111504155 CATTTCAATAGAACTTCCATGAAGGTCACCGACACTGAGCATTTCAGTAGAACTTCCAtgaaagtt i panTro5.chr2A C 0 T 39 s panPan2.chr2A 1282913 66 + 114371477 CATTTCAGTAGAACTTCCATGAAGGTCACCGACGCTGAGCATTTCAGTAGAACTTCCATGAAAGTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308617 66 + 1464242 CATTTCAGTAGAACTTCCATGAAGGTCACCGATGCTGAGCATTTCAGTAGAACTTCCATGAAAATG i gorGor5.CYUI01015607v1 T 39 C 0 s nomLeu3.chr19 1039829 66 + 81552678 CATTTCAGTAGAACTTCCATGAAGGTCACTGACACTAAGCATTTCAGTAGAACTTCCGTGAAGGTC i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=4820.000000 s hg38.chr2_KI270774v1_alt 45217 5 + 223625 ACCGA s panTro5.chr2A 1323123 5 + 111504155 ACCGA i panTro5.chr2A T 39 C 0 s panPan2.chr2A 1282979 5 + 114371477 ACCGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308683 5 + 1464242 ACCGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1039895 5 + 81552678 ACCGA i nomLeu3.chr19 C 0 T 273 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=4959.000000 s hg38.chr2_KI270774v1_alt 45222 7 + 223625 CACTGAG s panTro5.chr2A 1323128 7 + 111504155 CACTGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1282984 7 + 114371477 CGCTAAG i panPan2.chr2A C 0 T 234 s gorGor5.CYUI01015607v1 1308688 7 + 1464242 CACTGAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1039627 7 + 81552678 TGCTGAG i nomLeu3.chr19 T 273 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=31664.000000 s hg38.chr2_KI270774v1_alt 45229 39 + 223625 CATTTCAGTAGAACTTCCATGAAGGTCACCGATGCTGAG s panTro5.chr2A 1323135 39 + 111504155 CATTTCAGTAGAACTTCCAtgaaagttaccgacgctgag i panTro5.chr2A C 0 T 273 s panPan2.chr2A 1282757 39 + 114371477 CATTTCAGTAAAACTTCCATGAAAGTCACCGACGCTGAG i panPan2.chr2A T 234 C 0 s gorGor5.CYUI01015607v1 1308695 39 + 1464242 CATTTCAGTAGAATTTCCATGGAAGTCACCAACGCTGAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1039634 39 + 81552678 CATTTCAGTAGCACTTCCATGAAGGTCACCAACACTGAG i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=64880.000000 s hg38.chr2_KI270774v1_alt 45268 78 + 223625 CATTTCAGTAGAACTTCCATGAAGGTCACCGATGCTGAGCATTTCAGTAGAACTTCCATGAGAGTCACCGACCCTGAG s panTro5.chr2A 1322901 78 + 111504155 CATTTCAGTAGAACTTCCATGAGAGTCACCGATGCTGAGCATTTCAGTAGAACTTCCACGAAGGTCACCGACACTGAG i panTro5.chr2A T 273 C 0 s panPan2.chr2A 1282796 78 + 114371477 CATTTCAGTAGAACTTCCACGAAGGTCACCGATGCTGAGCATTTCAGCAGAACTTCCATGAAGGTCACCGATGCTGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308734 78 + 1464242 CATTTCAGTAGAACTTCCATGAAAGTCACCGATGCTGAGCATTTCCGTAGAACTTCCAtgaaagttaccgacgctgag i gorGor5.CYUI01015607v1 C 0 T 78 s nomLeu3.chr19 1039673 78 + 81552678 CATTTCAGTAGAACTTCCATGAAGGTCACCAATGCTGAGCATTTCAGTAGCACTTCCATGAGAGTCACCAACACTGAG i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=63008.000000 s hg38.chr2_KI270774v1_alt 45346 78 + 223625 CATTTCAGTAGAACTTCCATGAGATACACCGATGCTGAGCATTTCAGTAGAACTTCCACGAAGGTCACCGACGCTGAG s panTro5.chr2A 1322979 78 + 111504155 CATTTCAGTAGAACTTCCACGAAGGTCACTGACGCTGAGCATTTCAGCAGAACTTCCATGAGAGTCACCGATGCTGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1282874 78 + 114371477 CATTTCAGTAGAACTTCCATTAAAGTCACGGATGCTGAGCATTTCAGTAGAACTTCCATGAAGGTCACCGACGCTGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308734 78 + 1464242 CATTTCAGTAGAACTTCCATGAAAGTCACCGATGCTGAGCATTTCCGTAGAACTTCCAtgaaagttaccgacgctgag i gorGor5.CYUI01015607v1 T 78 T 39 s nomLeu3.chr19 1039751 78 + 81552678 CATTTCAGTAGAACTTCCATGAGAGTCACCGACACTGAGCATTTCAGTAGAACTTCCATGAAAGTCACCGATGCTGAG i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=27814.000000 s hg38.chr2_KI270774v1_alt 45424 36 + 223625 TGTTTCAGTAGAACTTCCGTGAAAGTCACCGACGCT s panTro5.chr2A 1323057 36 + 111504155 CATTTCAGTAGAACTTCCGTGAAGGTCACCAGTGCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1282952 36 + 114371477 CATTTCAGTAGAACTTCCATGAAAGTCACCGACGCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308773 36 + 1464242 CATTTCCGTAGAACTTCCAtgaaagttaccgacgct i gorGor5.CYUI01015607v1 T 39 T 117 s nomLeu3.chr19 1039829 36 + 81552678 CATTTCAGTAGAACTTCCATGAAGGTCACTGACACT i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=32488.000000 s hg38.chr2_KI270774v1_alt 45460 42 + 223625 AAGCATTTCAATAGAACTTCCATGAAGGTCACC--AACACTGAG s panTro5.chr2A 1323093 42 + 111504155 GAGCATTTCAATAGAACTTCCATGAAGGTCACC--GACACTGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1282988 42 + 114371477 AAGCATTTCAATAGAACTTCCATGAAGGTCACC--GACACTGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308692 42 + 1464242 GAGCATTTCAGTAGAATTTCCATGGAAGTCACC--AACGCTGAG i gorGor5.CYUI01015607v1 T 117 T 117 s nomLeu3.chr19 1039865 44 + 81552678 AAGCATTTCAGTAGAACTTCCGTGAAGGTCACCGAGATGCTGAG i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=15010.000000 s hg38.chr2_KI270774v1_alt 45502 16 + 223625 CATTTCAGTAGAACTT s panTro5.chr2A 1323135 16 + 111504155 CATTTCAGTAGAACTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1283030 16 + 114371477 CATTTCAGTAGAACTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308617 16 + 1464242 CATTTCAGTAGAACTT i gorGor5.CYUI01015607v1 T 117 C 0 s nomLeu3.chr19 1039909 16 + 81552678 CATTTCAGTAGAACTT i nomLeu3.chr19 C 0 T 236 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=18504.000000 s hg38.chr2_KI270774v1_alt 45518 23 + 223625 CCGTGAAAGTCACCGACGCTGAG s panTro5.chr2A 1323151 23 + 111504155 CCAtgaaagttaccgacgctgag i panTro5.chr2A C 0 T 39 s panPan2.chr2A 1283046 23 + 114371477 CCAtgaaagttaccaacgctgag i panPan2.chr2A C 0 T 273 s gorGor5.CYUI01015607v1 1308633 23 + 1464242 CCATGAAGGTCACCGATGCTGAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1039689 23 + 81552678 CCATGAAGGTCACCAATGCTGAG i nomLeu3.chr19 T 236 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=29135.000000 s hg38.chr2_KI270774v1_alt 45541 39 + 223625 CATTTCAATAGAACTTCTGTGAAGGTCACCAACGCTGAG s panTro5.chr2A 1323135 39 + 111504155 CATTTCAGTAGAACTTCCAtgaaagttaccgacgctgag i panTro5.chr2A T 39 T 117 s panPan2.chr2A 1282796 39 + 114371477 CATTTCAGTAGAACTTCCACGAAGGTCACCGATGCTGAG i panPan2.chr2A T 273 C 0 s gorGor5.CYUI01015607v1 1308656 39 + 1464242 CATTTCAGTAGAACTTCCATGAAAATGACCGACACTGAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1039712 39 + 81552678 CATTTCAGTAGCACTTCCATGAGAGTCACCAACACTGAG i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=23663.000000 s hg38.chr2_KI270774v1_alt 45580 30 + 223625 CATTTCAGTAGAACTTCCACAAAGGTCACT s panTro5.chr2A 1323057 30 + 111504155 CATTTCAGTAGAACTTCCGTGAAGGTCACC i panTro5.chr2A T 117 C 0 s panPan2.chr2A 1282835 30 + 114371477 CATTTCAGCAGAACTTCCATGAAGGTCACC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308695 30 + 1464242 CATTTCAGTAGAATTTCCATGGAAGTCACC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1039751 30 + 81552678 CATTTCAGTAGAACTTCCATGAGAGTCACC i nomLeu3.chr19 C 0 I 119 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=187.000000 s hg38.chr2_KI270774v1_alt 45610 1 + 223625 A s panTro5.chr2A 1323087 1 + 111504155 A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1282865 1 + 114371477 G i panPan2.chr2A C 0 I 78 s gorGor5.CYUI01015607v1 1308725 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1039900 1 + 81552678 G i nomLeu3.chr19 I 119 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=6447.000000 s hg38.chr2_KI270774v1_alt 45611 8 + 223625 ACGCTGAG s panTro5.chr2A 1323088 8 + 111504155 GTGCTGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1282944 8 + 114371477 ACGCTGAG i panPan2.chr2A I 78 C 0 s gorGor5.CYUI01015607v1 1308726 8 + 1464242 ACGCTGAG i gorGor5.CYUI01015607v1 C 0 T 117 s nomLeu3.chr19 1039901 8 + 81552678 ATGCTGAG i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=30888.000000 s hg38.chr2_KI270774v1_alt 45619 39 + 223625 CATTTCAGTAGAACTTCCGTGAAGGTCACCGATGCTGAG s panTro5.chr2A 1323096 39 + 111504155 CATTTCAATAGAACTTCCATGAAGGTCACCGACACTGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1282952 39 + 114371477 CATTTCAGTAGAACTTCCATGAAAGTCACCGACGCTAAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308617 39 + 1464242 CATTTCAGTAGAACTTCCATGAAGGTCACCGATGCTGAG i gorGor5.CYUI01015607v1 T 117 T 39 s nomLeu3.chr19 1039909 38 + 81552678 CATTTCAGTAGAACTT-CATGAAAGTCACTGATGCTGAG i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=32588.000000 s hg38.chr2_KI270774v1_alt 45658 39 + 223625 CATTTCAGTAGAACTTCCACGAAGGTCACCGACGCTGAG s panTro5.chr2A 1323135 39 + 111504155 CATTTCAGTAGAACTTCCAtgaaagttaccgacgctgag i panTro5.chr2A C 0 T 78 s panPan2.chr2A 1282991 39 + 114371477 CATTTCAATAGAACTTCCATGAAGGTCACCGACACTGAG i panPan2.chr2A C 0 T 273 s gorGor5.CYUI01015607v1 1308617 39 + 1464242 CATTTCAGTAGAACTTCCATGAAGGTCACCGATGCTGAG i gorGor5.CYUI01015607v1 T 39 C 0 s nomLeu3.chr19 1039947 39 + 81552678 CATTTCAGTAGAACTTCCAGGAAGGTCACTGACACTGAG i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=62069.000000 s hg38.chr2_KI270774v1_alt 45697 78 + 223625 CATTTCAGTAGAACTTCCGTGAAAGTCACCGACACTGAGCATTTCAATACAACTTCCATGAAGGTCACCGACACTGAG s panTro5.chr2A 1323096 78 + 111504155 CATTTCAATAGAACTTCCATGAAGGTCACCGACACTGAGCATTTCAGTAGAACTTCCAtgaaagttaccgacgctgag i panTro5.chr2A T 78 T 195 s panPan2.chr2A 1282757 78 + 114371477 CATTTCAGTAAAACTTCCATGAAAGTCACCGACGCTGAGCATTTCAGTAGAACTTCCACGAAGGTCACCGATGCTGAG i panPan2.chr2A T 273 C 0 s gorGor5.CYUI01015607v1 1308656 78 + 1464242 CATTTCAGTAGAACTTCCATGAAAATGACCGACACTGAGCATTTCAGTAGAATTTCCATGGAAGTCACCAACGCTGAG i gorGor5.CYUI01015607v1 C 0 T 117 s nomLeu3.chr19 1039986 78 + 81552678 CATTTCAGTAGAACTTCGGTGAAAGTCACCAACGCTGAGCGTTTCAGTAGAACTTCCATGAAAGTCACCGACGCTGAG i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=128735.000000 s hg38.chr2_KI270774v1_alt 45775 156 + 223625 CATTTCAGTAGAGCTTCCATGAAGGTCACCGATGCTGAGCATTTCAGTAGAACTTCCATGAAAGTCACCAACGCTGAGCATTTCAGTAGAACTTCCGTGAAGGTCACCGACGCTGAGCATTTCAGTAGAACTTCCGTGAAAGTCACCGACGCTGAG s panTro5.chr2A 1322979 156 + 111504155 CATTTCAGTAGAACTTCCACGAAGGTCACTGACGCTGAGCATTTCAGCAGAACTTCCATGAGAGTCACCGATGCTGAGCATTTCAGTAGAACTTCCGTGAAGGTCACCAGTGCTGAGCATTTCAATAGAACTTCCATGAAGGTCACCGACACTGAG i panTro5.chr2A T 195 C 0 s panPan2.chr2A 1282835 156 + 114371477 CATTTCAGCAGAACTTCCATGAAGGTCACCGATGCTGAGCATTTCAGTAGAACTTCCATTAAAGTCACGGATGCTGAGCATTTCAGTAGAACTTCCATGAAGGTCACCGACGCTGAGCATTTCAGTAGAACTTCCATGAAAGTCACCGACGCTAAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308617 156 + 1464242 CATTTCAGTAGAACTTCCATGAAGGTCACCGATGCTGAGCATTTCAGTAGAACTTCCATGAAAATGACCGACACTGAGCATTTCAGTAGAATTTCCATGGAAGTCACCAACGCTGAGCATTTCAGTAGAACTTCCATGAAAGTCACCGATGCTGAG i gorGor5.CYUI01015607v1 T 117 C 0 s nomLeu3.chr19 1040064 156 + 81552678 CATTTCAGCAGAACTTCCATGAAGGTCACCAATGCTGAGCATTTCAGTAGAACTTCCATGAAAGTCACCGACACTGAGCATTTCAGTAGAACTTCCATGAGAGTCACCGACGCTGAGCATTTCAGTAGAACTTCCAtgaaagtcacggattccgag i nomLeu3.chr19 C 0 T 391 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=31881.000000 s hg38.chr2_KI270774v1_alt 45931 39 + 223625 CATTTCAATAGAACTTCCATGAAGGTCACTGACGCTGAG s panTro5.chr2A 1323135 39 + 111504155 CATTTCAGTAGAACTTCCAtgaaagttaccgacgctgag i panTro5.chr2A C 0 T 78 s panPan2.chr2A 1282991 39 + 114371477 CATTTCAATAGAACTTCCATGAAGGTCACCGACACTGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308773 39 + 1464242 CATTTCCGTAGAACTTCCAtgaaagttaccgacgctgag i gorGor5.CYUI01015607v1 C 0 T 78 s nomLeu3.chr19 1039829 39 + 81552678 CATTTCAGTAGAACTTCCATGAAGGTCACTGACACTAAG i nomLeu3.chr19 T 391 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=25615.000000 s hg38.chr2_KI270774v1_alt 45970 30 + 223625 CATTTCAATAGAACTTCCGTGAAAGTCACC s panTro5.chr2A 1323096 30 + 111504155 CATTTCAATAGAACTTCCATGAAGGTCACC i panTro5.chr2A T 78 C 0 s panPan2.chr2A 1283030 30 + 114371477 CATTTCAGTAGAACTTCCAtgaaagttacc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308734 30 + 1464242 CATTTCAGTAGAACTTCCATGAAAGTCACC i gorGor5.CYUI01015607v1 T 78 C 0 s nomLeu3.chr19 1039868 30 + 81552678 CATTTCAGTAGAACTTCCGTGAAGGTCACC i nomLeu3.chr19 C 0 I 79 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=5616.000000 s hg38.chr2_KI270774v1_alt 46000 8 + 223625 GATGCTGA s panTro5.chr2A 1323126 8 + 111504155 GACACTGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1283060 8 + 114371477 aacgctga i panPan2.chr2A C 0 T 39 s gorGor5.CYUI01015607v1 1308764 8 + 1464242 GATGCTGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1039977 8 + 81552678 GACACTGA i nomLeu3.chr19 I 79 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=32037.000000 s hg38.chr2_KI270774v1_alt 46008 40 + 223625 ACATTTCAGTAGAACTTCGATGGAAGTTGCCAATGCTGAG s panTro5.chr2A 1323134 40 + 111504155 GCATTTCAGTAGAACTTCCAtgaaagttaccgacgctgag i panTro5.chr2A C 0 T 39 s panPan2.chr2A 1283029 40 + 114371477 GCATTTCAGTAGAACTTCCAtgaaagttaccaacgctgag i panPan2.chr2A T 39 T 39 s gorGor5.CYUI01015607v1 1308772 40 + 1464242 GCATTTCCGTAGAACTTCCAtgaaagttaccgacgctgag i gorGor5.CYUI01015607v1 C 0 T 78 s nomLeu3.chr19 1039985 40 + 81552678 GCATTTCAGTAGAACTTCGGTGAAAGTCACCAACGCTGAG i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=34508.000000 s hg38.chr2_KI270774v1_alt 46048 39 + 223625 CATTTCAGTAGAACTTCCATGAAAGTCACCAACGCTGAG s panTro5.chr2A 1323135 39 + 111504155 CATTTCAGTAGAACTTCCAtgaaagttaccgacgctgag i panTro5.chr2A T 39 T 39 s panPan2.chr2A 1283030 39 + 114371477 CATTTCAGTAGAACTTCCAtgaaagttaccaacgctgag i panPan2.chr2A T 39 T 39 s gorGor5.CYUI01015607v1 1308734 39 + 1464242 CATTTCAGTAGAACTTCCATGAAAGTCACCGATGCTGAG i gorGor5.CYUI01015607v1 T 78 T 156 s nomLeu3.chr19 1040025 39 + 81552678 CGTTTCAGTAGAACTTCCATGAAAGTCACCGACGCTGAG i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=33008.000000 s hg38.chr2_KI270774v1_alt 46087 39 + 223625 CATTTCAGTAGAACTTCCACGAAGGTCACCAATGCTGAG s panTro5.chr2A 1323135 39 + 111504155 CATTTCAGTAGAACTTCCAtgaaagttaccgacgctgag i panTro5.chr2A T 39 T 117 s panPan2.chr2A 1283030 39 + 114371477 CATTTCAGTAGAACTTCCAtgaaagttaccaacgctgag i panPan2.chr2A T 39 T 54 s gorGor5.CYUI01015607v1 1308617 39 + 1464242 CATTTCAGTAGAACTTCCATGAAGGTCACCGATGCTGAG i gorGor5.CYUI01015607v1 T 156 C 0 s nomLeu3.chr19 1040064 39 + 81552678 CATTTCAGCAGAACTTCCATGAAGGTCACCAATGCTGAG i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=12438.000000 s hg38.chr2_KI270774v1_alt 46126 24 + 223625 CATTTCAGTAGAACTTCCACGAAA s panTro5.chr2A 1323057 24 + 111504155 CATTTCAGTAGAACTTCCGTGAAG i panTro5.chr2A T 117 C 0 s gorGor5.CYUI01015607v1 1308656 24 + 1464242 CATTTCAGTAGAACTTCCATGAAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1040103 24 + 81552678 CATTTCAGTAGAACTTCCATGAAA i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C e panPan2.chr2A 1283069 54 + 114371477 T a score=28465.000000 s hg38.chr2_KI270774v1_alt 46150 37 + 223625 ATGACTGACACTGAGCATTTCAGTAGAATTTCCATGG s panTro5.chr2A 1323081 37 + 111504155 GTCACCAGTGCTGAGCATTTCAATAGAACTTCCATGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1283015 37 + 114371477 GTCACCGACACTGAGCATTTCAGTAGAACTTCCAtga i panPan2.chr2A T 54 T 78 s gorGor5.CYUI01015607v1 1308680 37 + 1464242 ATGACCGACACTGAGCATTTCAGTAGAATTTCCATGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1040127 37 + 81552678 GTCACCGACACTGAGCATTTCAGTAGAACTTCCATGA i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=45395.000000 s hg38.chr2_KI270774v1_alt 46187 56 + 223625 AAGTCACCAACACTGAGCATTTCAGTAGAACTTCCATGAAAGTCACCGATGCTGAG s panTro5.chr2A 1323118 56 + 111504155 AGGTCACCGACACTGAGCATTTCAGTAGAACTTCCAtgaaagttaccgacgctgag i panTro5.chr2A C 0 T 12 s panPan2.chr2A 1282974 56 + 114371477 AAGTCACCGACGCTAAGCATTTCAATAGAACTTCCATGAAGGTCACCGACACTGAG i panPan2.chr2A T 78 C 0 s gorGor5.CYUI01015607v1 1308717 56 + 1464242 AAGTCACCAACGCTGAGCATTTCAGTAGAACTTCCATGAAAGTCACCGATGCTGAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1040164 56 + 81552678 GAGTCACCGACGCTGAGCATTTCAGTAGAACTTCCAtgaaagtcacggattccgag i nomLeu3.chr19 C 0 T 31 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=1602.000000 s hg38.chr2_KI270774v1_alt 46243 8 + 223625 CATTTCCA s panPan2.chr2A 1283030 8 + 114371477 CATTTCAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308773 8 + 1464242 CATTTCCG i gorGor5.CYUI01015607v1 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C e nomLeu3.chr19 1040220 31 + 81552678 T e panTro5.chr2A 1323174 12 + 111504155 T a score=9828.000000 s hg38.chr2_KI270774v1_alt 46251 19 + 223625 TAGAACTTCCATGAAAGTG s panPan2.chr2A 1283038 19 + 114371477 TAGAACTTCCAtgaaagtt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308781 19 + 1464242 TAGAACTTCCAtgaaagtt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1040189 19 + 81552678 TAGAACTTCCAtgaaagtc i nomLeu3.chr19 T 31 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C e panTro5.chr2A 1323174 12 + 111504155 T a score=138500.000000 s hg38.chr2_KI270774v1_alt 46270 164 + 223625 ACCGACGCTGAGATGGAATGACTCCTGTGAAACCCTCACAAAATGGACCCCCCCCCccatgaaagaggaaccatgaatatttacctgataacaagaagtaccacaaaagaccctggcaacaccacaagctgcaca---------------------aagaccactgcaaccttgtgcaaagacaa s panTro5.chr2A 1323162 163 + 111504155 accgacgctgagatggaatgactcctgtgaaaccctcacaaaatggacccccccccc-atgaaagaggaaccatgaatatttacctgataacaagaagtaccacaaaagaccctggtaacaccacaggctgcaca---------------------aagaccactgcaaccttgtgcaaagacaa i panTro5.chr2A T 12 C 0 s panPan2.chr2A 1283057 162 + 114371477 accaacgctgagatggaatgactcctgtgaaaccctcacaaaatggaccccccccc--atgaaagaggaaccatgaatatttacctgataacaagaagtaccacaaaagaccctggtaacaccacaggctgcaca---------------------aagaccactgcaaccttgtgcaaagacaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308800 160 + 1464242 accgacgctgagatggaatgactcctgtgaaaccctcacaaaatggaccccccc----atgaaagaggaaccatgaatatttacctgataacaagaagtaccacaaaagaccctggcaacaccacaagctgcaca---------------------aagaccactgcaaccttgtgcaaagacaa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1040208 184 + 81552678 acggattccgagatggaatgactcctgtgaaaccctcacaaaatggacccccccccc-atgaaagaggaaccatgaatattttcctgataacaagaagtaccacaaaagaccctagcaacaccacaacctgcacaaagaccactgcaaccttgtgcaagaccactgcaaccttgtgcaaagacaa i nomLeu3.chr19 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1309970 1 - 13651311 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I e cerAty1.NW_012000820v1 1322902 0 - 10304083 C e macNem1.NW_012011978v1 1368833 0 + 3644372 C e macFas5.chr13 1340491 0 - 111193037 C e rheMac8.chr13 1368308 0 + 108979918 C a score=14230.000000 s hg38.chr2_KI270774v1_alt 46434 4 + 223625 gtct s panTro5.chr2A 1323325 4 + 111504155 gtct i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1283219 4 + 114371477 gtct i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308960 4 + 1464242 gtct i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1040392 4 + 81552678 gtct i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1368308 4 + 108979918 GTCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1340491 4 - 111193037 GTCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1368833 4 + 3644372 GTCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1322902 4 - 10304083 GTCC i cerAty1.NW_012000820v1 C 0 C 0 s colAng1.NW_012118821v1 1309971 4 - 13651311 GTCC i colAng1.NW_012118821v1 I 1 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e manLeu1.NW_012103754v1 871909 2 - 2200435 I e chlSab2.chr14 1394041 11 - 107702431 I a score=27495.000000 s hg38.chr2_KI270774v1_alt 46438 6 + 223625 tctatg s panTro5.chr2A 1323329 6 + 111504155 tctatg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1283223 6 + 114371477 tctatg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308964 6 + 1464242 tctatg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1040396 6 + 81552678 tctatg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1368312 6 + 108979918 TCTACG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1340495 6 - 111193037 TCTACG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1368837 6 + 3644372 TCTACG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1322906 6 - 10304083 TCTACG i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 871911 6 - 2200435 TCTACG i manLeu1.NW_012103754v1 I 2 C 0 s colAng1.NW_012118821v1 1309975 6 - 13651311 TCTACG i colAng1.NW_012118821v1 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e chlSab2.chr14 1394041 11 - 107702431 I a score=918721.000000 s hg38.chr2_KI270774v1_alt 46444 173 + 223625 aggacacaagctccccttgctattgatccttgtagccaaggataacggtttcaaaacaacttctgtaa-cctcctcactttgcctttaagctttcctgaatcccagcctctttggatatccctataatctcttatagcacatatgtcccagcttgcaattgcctacatagtccc s panTro5.chr2A 1323335 173 + 111504155 aggacagaagctccccttgctattgatccttgtagccaaggataacggtttcaaaacaacttctgtaa-cctcctcactttgcctttaagcttccctgaatcccagcctctttggatatccctataatctcttatagcacatacgtcccagcttgcaattgcctacatagtccc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1283229 173 + 114371477 aggacagaagctccccttgctattgatccttgtagccaaggataacggtttcaaaacaacttctgtaa-cctcctcactttgcctttaagcttccctgaatcccagcctctttggatatccctataatctcttatagcacatacgtcccagcttgcaattgcctacatagtccc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1308970 172 + 1464242 aagacacgagct-cccttgctattgatccttgtagccaaggataacagtttcaaaacaacttctataa-cctcctcactttgcctttaagcttccctgaatcccagcctctttggatatccctataatctcttatagcacatatgtcccagcttgcaattgcctacatagtccc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1040402 172 + 81552678 aggacgcaagctccccttgctattgatccttgtagccaagagtaac-gtttcaaaacaacttctgtaa-cctcctcactttgcctttaagcttccctgaatcccagcctctctggatatccctaaaatctcttatagcacatatgtcccagcttgcaattgcctacgtagtccc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1368318 174 + 108979918 AGGACACAAGCCCcccttgctactgatccctgtaaccaagggtaacggttttgaaacaacttctgtgaccctcctcactttgccttcaagcttccctgaatcccagcctctctgggtggccctgtcatttcttatagcacctatgtcccagcttgcaatcgcctacagagtccc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1340501 174 - 111193037 AGGACACAAGCCCcccttgctactgatccctgtaaccaagggtaacggttttgaaacaacttctgtgaccctcctcactttgcctttaagcttccctgaatcccagcctctctggatagccctgtcatttcttatagcacctatgtcccagcttgcaatcgcctacagagtccc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1368843 174 + 3644372 AGGACACAAgccacccttgctattgatccctgtaaccaagggtaacggttttgaaacaacttctgtgaccctcctcactttgcctttaagcttccctgaatcccagcctctctggatagccctgtcatttcttatagcacctatgtgtcagcttgcaatcgcctacagagtccc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1322912 174 - 10304083 AGGACACAAGCCCcccttgctattgatccctgtagccaagggtaacggtttcgaaacaacttctgtgaccctcctcactttgcctttaagcttccctgaatcccagcctctctggatagccctgtcatctcctatagcacctatgtcccagcttgcaatcgcctacatagtccc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1394052 174 - 107702431 AGGACACAAGACCccctggctattgatccctgtagccaagggtaacggtttcgaaacaacttctgtggccctcctcactttgcctttaagcttccctgaatcccatcctctctggatagccctgtcatctcctatagcacctatgtcccagcttgcaatcgcctacatagtccc i chlSab2.chr14 I 11 C 0 s manLeu1.NW_012103754v1 871917 174 - 2200435 AGGACACAAGCCCcccttgctattgatccctgtagccaagggtaacggtttcgaaacaacttctctgaccctcctcactttgcctttaagcttccctgaatcccagcctctctggatagccctgtcatctcctatagcacctatgtcccagcttgcaatcgcctacatagtccc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1309981 164 - 13651311 AGGACACAAGCCCctctggctattgatccctgtagccaagggtaacggtttcaaaacaacttctgtgaccctcctcactttgccttcaagtttccctgaatcccagcct----------ccctgtcatctcttatagcacctatgtcccagcttgcaatcgcctacgtcgtccc i colAng1.NW_012118821v1 C 0 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e dasNov3.JH576208 1602688 31 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I a score=615969.000000 s hg38.chr2_KI270774v1_alt 46617 113 + 223625 aaataaactttgggagagcctctctctgtcattgtattaggctgacaCTCCCTAACCCAACATATTGGACTGTTCATTCCA-------------CACTGTTTCCTGCA-CAGAGAGCCAGCAGGTGC-- s panTro5.chr2A 1323508 113 + 111504155 aaataaactttgggagagcctctctctgtcattgtattaggctgacaCTCCCTAACCCAACATATTGGACTGTTCATTCCA-------------CACTGTTTCCTGCA-CAGAGAGCCAGCAGGTGC-- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1283402 113 + 114371477 aaataaactttgggagagcctctctctgtcattgtattaggctgacaCTCCCTAACCCAACATATTGGACTGTTCATTCCA-------------CACTGTTTCCTGCA-CAGAGAGCCAGCAGGTGC-- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1309142 112 + 1464242 aaataaactttgggagagcctctctctgtcattgtattaggctgacaCTCCCTAA-CCAACATATTGGACTGTTCATTCCA-------------CACTGTTTCCTGTA-CAGAGAGCCAGCAGGTGC-- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1040574 113 + 81552678 aaataaactttgggagagcctctctctgccattgtattaggctgacCCTCCCTAACCCAACGTATTGGACTGTTCATTCCA-------------CACTGTTTCCTGCA-CGTAGAGCCAGCAGGTGC-- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1368492 113 + 108979918 agataaactttgggagagcctgtctctgccattgtatgaggctgacaCTCCCTCACCCAACGTATCAGACTGTTCGTTCCA-------------CACTGTTTCCAGCA-CAGAGAGCCAGCAGACAC-- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1340675 113 - 111193037 agataaactttgggagagcctgtctctgccattgtatgaggctgacaCTCCCTCACCCAACGTATCAGACTGTTCGTTCCA-------------CACTGTTTCCAGCA-CAGAGAGCCAGCAGACAC-- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1369017 113 + 3644372 agataaactttgggagagcctgtctctgtcattgtatgaggctgacaCTCCCTCACCCAACGTATCAGACTGTTCGTTCCA-------------CACTGTTTCCAGCA-CAGAGAGCCAGCAGACAC-- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1323086 113 - 10304083 agataaactttgggagagcctgtctctgtcattgtatgaggctgacaCTCCCTCACCCAGCGTATCAGACTGTTCGTTCCA-------------CACTGTTTCCAGCA-CAGAGAGCCAGCAGGCAC-- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1394226 113 - 107702431 agataaactttgggagagcctctctctgtcattgtatgaggctgacaGTCCCTCACCCAACGTATCGGACTGTTCGTTCCA-------------CACTGTTTCCAGCA-CAGAGAGCCAGCAGGCAC-- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 872091 113 - 2200435 agataaactttgggagagcctgtctctgtcatcgtatgaggctgacaCTCCCTCACCCAACGTACCGGACTGTTCGTTCCA-------------CACTGTTTCCAGCA-CAGAGAGCCAGCAGGCAC-- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1310145 113 - 13651311 agatgaactttgggagagcctctctctatcatcgtatcaggctgacaCTCCCTCACCCAACATACCGGACTGTTCATTCCA-------------CACTGTTTCCAGCA-CAGACAGCCAGCAGGCAC-- i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1602719 128 + 4416731 AGACAAATTCTAGGAAATGCTGTTCTGGTGATACAATCACAATGTATTTTCCTAGTCCAGCATGTTGTGATCTCCACACCAATGTATTTTAGTGTACTATATGCATAATCAAAGAGCTA-CAGAGGTCT i dasNov3.JH576208 I 31 C 0 e mm10.chr12 89950211 631 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e calJac3.chr14 1318361 3323 - 108792865 I a score=104574.000000 s hg38.chr2_KI270774v1_alt 46730 15 + 223625 -CCCTTCCTCTGCAGG- s panTro5.chr2A 1323621 15 + 111504155 -CCCTTCCTCTGCAGG- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1283515 15 + 114371477 -CCCTTCCTCTGCAGG- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1309254 15 + 1464242 -CCCTTCCTCTGCAGG- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1040687 15 + 81552678 -CCCTTCCTCTGCAAG- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1368605 15 + 108979918 -CCCCTCCTCTGCAGG- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1340788 15 - 111193037 -CCCCTCCTCTGCAGG- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1369130 15 + 3644372 -CCCCTCCTCTGCAGG- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1323199 15 - 10304083 -CCCCTCCTCTGCAGG- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1394339 15 - 107702431 -CCCCTCCTCTGCAGG- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 872204 15 - 2200435 -CCCCTCCTCTGCAGG- i manLeu1.NW_012103754v1 C 0 M 1215 s colAng1.NW_012118821v1 1310258 15 - 13651311 -CCCCTTCTCTGCAGG- i colAng1.NW_012118821v1 C 0 C 0 s mm10.chr12 89950842 15 - 120129022 -CTCTTCCTCCGCAGG- i mm10.chr12 I 631 C 0 s dasNov3.JH576208 1602847 17 + 4416731 GCTTTCCTTCTCCAGGG i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e calJac3.chr14 1318361 3323 - 108792865 I a score=656027.000000 s hg38.chr2_KI270774v1_alt 46745 145 + 223625 TGGAAACACATCAGCCCATGA-------CCGACATGTGA-ACACAGG--TGAGGAGT-------GCAGCGAGGGATCCATACAGGGTGTCCCCAGCTTAG-AACTCAACACAAGTATTTTGTTCAAACAAAATGTCAAAATGTGATTTCA---ATCAGCTCTAGTT s panTro5.chr2A 1323636 145 + 111504155 TGGAAACACATCTGCCCATGA-------CCGACATGTGA-ACACAGG--TGAGGAGT-------GCAGCGAGGGATCCATACAGGGCGTCCCCAGCTTAG-AACTCAACACAAGTATTTTGTTCAAACAAAATGTCAAAATGTGATTTCA---ATCAGCTCTAGTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1283530 145 + 114371477 TGGAAACACATCTGCCCATGA-------CCGACATGTGA-ACACAGG--TGAGGAGT-------GCAGCGAGGGATCCATACAGGGCGTCCCCAGCTTAG-AACTCAACACAAGTATTTTGTTCAAACAAAATGTCAAAATGTGATTTCA---ATCAGCTCTAGTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1309269 145 + 1464242 TGGAAACACATCAGCCCATGA-------CCAACATGTGA-ACACAGG--TGAGGAGT-------GCAGCGAGGGATCCATACAGGGCGTCCCCAGCTTAG-AACTCAACACAAGTATTTTGTTCAAACAAAATGTCAAAATGTGATTTCA---ATCAGCTCTAGTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1040702 152 + 81552678 TGGAAACACATCAGCCCATGACTGACACCTGACACGTGA-ACACGGG--TGAGGAGT-------GCAGGGAGGGATCCATAGAGGGCGTCCCCGGCTTAG-AACTCAACACAAGTATTTTGTTCAAACAAAATGTCAAAATGTGACTTTG---ATCAGCTCTAGTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1368620 146 + 108979918 CGGAAACGCGTCAGCCCATGA-------CCTACGCAGGA-ACACGGG--TGAGGAGC-------ACACGGAGGGATCCATACAGGGCGTCTCAGGCTTAGAAACTCAACACAGGTATTTTATTCAAACAAAATATCAAAATGTGATTTTG---ATCAGCTCTAGTT i rheMac8.chr13 C 0 I 312 s macFas5.chr13 1340803 146 - 111193037 CGGAAACGCGTCAGCCCATGA-------CCTACGCAGGA-ACACGGG--TGAGGAGC-------ACACGGAGGGATCCATACAGGGCGTCTCAGGCTTAGAAACTCAACACAGGTATTTTATTCAAACAAAATATCAAAATGTGATTTTG---ATCAGCTCTAGTT i macFas5.chr13 C 0 I 312 s macNem1.NW_012011978v1 1369145 146 + 3644372 CGGAAACGCGTCAGCCCATGA-------CCTATGCAGGA-ACACGGG--TGAGGAGC-------ACAGGGAGGGCTCCATACAGGGCGTCTCAGGCTTAGAAACTCAACACAGGTATTTTATTCAAACAAAATATCAAAATGTGATTTTG---ATCAGCTCTAGTT i macNem1.NW_012011978v1 C 0 I 311 s cerAty1.NW_012000820v1 1323214 146 - 10304083 CGGAAACGCGTCAGCCCATGA-------CCTACGTGGGA-ACACGGG--TGAGGAGC-------GCAGGGAGGGATCCATACAGGGCGTCTCAGGCTTAGAAACTCAACACAGGTATTTTATTCAAACAAAATATCAAAATGTGATTTTG---ATCAGCTCTTGTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1394354 145 - 107702431 CGGAAACGCGTCAGCCCATGA-------CCTACGCGGGA-ACACGGG--TGAGGAGC-------GCAGGGAGGGATCCATACAGGGCGTCTCAGGCTTAG-AACTCAACACAAGTATTTTGTTCAAACAAAATATCAAAATGTGATTTTG---CTCAGCGCTAGTT i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1310273 145 - 13651311 TGGAAACGCGTCAGCCCATGA-------CCTACACGGGA-ACAGGGG--TGAGGAGC-------GCAGGGAGGGATCCACACAGGGCATCTCAGGCTTAG-AACTCAACACAAGTATTTTGTTCAAACAAAATGTCAAAATGTGATTTTG---ATCAGCTCTAGTT i colAng1.NW_012118821v1 C 0 C 0 s mm10.chr12 89950857 136 - 120129022 TGGGAGT-TGGCAGCCTACAC-------C--ACCTGTGACACAAGCT--AAAGGGGC-----CAGCAGGTAGTGGCGGGTACAGAG-----ACAACACTG-GAATCACTGTGAATGTCCTGTCC---CAAAAGGCC-AAACATGGCTTTGGCTAACAACTCTT--- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1602864 148 + 4416731 TTAAAATATAACAGCCTTTGA-------CTGGCACCTAT-TCATGTATTTGAGGAGCATGGAAGGAAGTGAGGGATACTTGGAG------CCAGACTTTG-AATTCAACACGCGTATTCAGTTCAAACAGAATGCCAGAATATGTTTTTA---ATCTACTCTCGTT i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e calJac3.chr14 1318361 3323 - 108792865 I e manLeu1.NW_012103754v1 872219 1215 - 2200435 M a score=28134.000000 s hg38.chr2_KI270774v1_alt 46890 9 + 223625 -ACAAATTCA s panTro5.chr2A 1323781 9 + 111504155 -ACAAATTCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1283675 9 + 114371477 -ACAAATTCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1309414 9 + 1464242 -ACAAATTCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1040854 9 + 81552678 -ACAAATATA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1369078 9 + 108979918 -ACAAATCTA i rheMac8.chr13 I 312 C 0 s macFas5.chr13 1341261 9 - 111193037 -ACAAATCTA i macFas5.chr13 I 312 C 0 s macNem1.NW_012011978v1 1369602 9 + 3644372 -ACAAATCTA i macNem1.NW_012011978v1 I 311 C 0 s cerAty1.NW_012000820v1 1323360 9 - 10304083 -ACAAATCTA i cerAty1.NW_012000820v1 C 0 I 324 s chlSab2.chr14 1394499 9 - 107702431 -ACAAATCTG i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1310418 9 - 13651311 -AGAAATCTA i colAng1.NW_012118821v1 C 0 C 0 s mm10.chr12 89950993 9 - 120129022 -GCAAAGGGG i mm10.chr12 C 0 I 1 s dasNov3.JH576208 1603012 9 + 4416731 GTAAGATTT- i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e calJac3.chr14 1318361 3323 - 108792865 I e manLeu1.NW_012103754v1 872219 1215 - 2200435 M a score=845497.000000 s hg38.chr2_KI270774v1_alt 46899 179 + 223625 TAATTCAAGATAGCCTTGCTGGTAATACTTGGTTAGAAAATTAACCAGACCAG-AGATATCATGA----------CTCAGCTTTTGGC--TGAATTGAAGATGTTCAGTGAAATGCCCACAGGATGCCTGTTTATTCAGTATCTGGATCATGACATAATGGACTGAGTATTGTTTCATAAGCTTTAATTTCA s panTro5.chr2A 1323790 179 + 111504155 TAATTCAAGATAGCCTTGCTGGTAATACTTGGTTAGAAAATTAACCAGAGCAG-AGATATCATGA----------CTCAGCTTTTGGC--TGAATTGAAGATGTTCAGTGAAATGCCCACAGGATGCCTGTTTATTCAGTATCTGGATCATGACATAATGGACTGAATATTGTTTCATAAGCTTTAATTTCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1283684 179 + 114371477 TAATTCAAGATAGCCTTGCTGGTAATACTTGGTTAGAAAATTAACCAGAGCAG-AGATATCATGA----------CTCAGCTTTTGGC--TGAATTGAAGATGTTCAGTGAAATGCCCACAGGATGCCTGTTTATTCAGTATCTGGATCATGACATAATGGACTGAGTATTGTTTCATAAGCTTTAATTTCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1309423 179 + 1464242 TAATTCAAGATAGCCTTGCTGGTAATACTTGGTTAGAAAATTAACCAGACCGG-AGATATCATGA----------CTCAGCTTTTGGC--TGAATTGAAGATGTTCAGTGAAATGCCCACAGGATGCCTGTTTATTCAGTATCTGGATCATGACATAATGGACTGAGTATTGTTTCATAAGCTTTAATTTCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1040863 179 + 81552678 TAATTCAAGATAGTCTTGCTGGTAATACTTGTGTAGAAAATTAACCAGACCAG-AGATATCATGA----------CTCAGCTTTTGGC--TGAATTGAAGATGTTCAGTGAAATGCCCACAGGATGCCTGTTTATTCAGTATCTGGATCATGACATAATGGACCGAGTATTGTTTCATAAGCTTTAATTTCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1369087 164 + 108979918 TAATTCAAGATAGCCTTGCTGGTAATACTTGGTTAGAAAATTAACCAGACCAG-AGATATCAT---------------------------TGAATTGAAGATGTTCAGTGACATGCCCACAGGATGCCTGTTTATTCAGTATCTGGATCACGACAGAATGGACTGAGTATTGTTTCAGAAGCTTTAATTTCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1341270 164 - 111193037 TAATTCAAGATGGCCTTGCTGGTAATACTTGGTTAGAAAATTAACCAGACCAG-AGATATCAT---------------------------TGAATTGAAGATGTTCAGTGAAATGCCCACAGGATGCCTGTTTATTCAGTATCTGGATCACGACAGAATGGACTGAGTATTGTTTCAGAAGCTTTAATTTCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1369611 164 + 3644372 TAATTCAAGATAGCCTTGCTGGTGATACTTGGTTAGAAAATTAACCAGACCAG-AGATATCAT---------------------------TGAATCGAAGATGTTCAGTGAAATGCCCACAGGATGCCTGTTTATTCAGTATCTGGATCACGACAGAATGGACTGAGTATTGTTTCAGAAGCTTTAATTTCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1323693 164 - 10304083 TAATTCAAGATAGCCTTGCTGGTAATACTTGGTTAGAAAATTAACCAGACCAG-AGATATCAT---------------------------TGAATTGAAGATGTTCAGTGAAATGCCCACAGGATGCCTGTTTATTCAGTATCTGGATCACGACAGAATGGACTGAGTATTGTTTCAGAAGCTTTAATTTCA i cerAty1.NW_012000820v1 I 324 C 0 s chlSab2.chr14 1394508 179 - 107702431 TAATTCAAGATAGCCTTGCTGGTAATACTTGGTTAGAAAATTAACCAGACCAG-AGATACCATGA----------CTCAGCTTTTGGC--TGAATTGAAGATGTTGAGTGAAGCGCCCACAGGATGCCTGTTTATTCAGTATCTGGATCACGACAGAATGGACTGAGTATTGTTTCAGAAGCTTTAATTTCA i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1310427 179 - 13651311 TAATTCAAGATAGCCTTGCTGGTAATACTTGGTTAGAAAATTAACCAGACCAG-AGATACCATGA----------CTCAGCTTTTGGC--TGAATTGAAGATGTTCAGTGAAATGCCCACAGGGTGCCTGTTTATTCAGTATCTGGATGACGACAGAATGGACTGAGTATTGTTTCAGAAGCTTTAATTTCA i colAng1.NW_012118821v1 C 0 C 0 s mm10.chr12 89951003 169 - 120129022 TAGTTCAGGATGCTTCTGCTGGCAGCATCTGCTTAGGATA-TAAGCGGACCAGCAGGTACCATGACTTCCCCCACCTCACCCTCCACCCTGGAACCAAGGATGTTCTATGCAATGTTCA----------GTTTTT---GTATCTGGATCA---------AGCCTGCCTCCTGCTTCAGAAGCTTATACTCCA i mm10.chr12 I 1 C 0 s dasNov3.JH576208 1603021 89 + 4416731 TGATTCAAGATAGCCTCAATGGTAATATTTGGTTAGAATCCTAAACAAATCAG---------------------------------------------------------------------------------------------------ACCTAATGGACC----ATCATTTCAGAAGCTTTTATTTGA i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 902238 1616 + 5252280 I e calJac3.chr14 1318361 3323 - 108792865 I e manLeu1.NW_012103754v1 872219 1215 - 2200435 M a score=262597.000000 s hg38.chr2_KI270774v1_alt 47078 42 + 223625 TTCCTGGCTTTCAGTA-----CTACTCATTGAGTTTTAGTATGGAAT s panTro5.chr2A 1323969 42 + 111504155 TTCCTGGCTTTCAATA-----CTACTCATTGAGTTTTAGTGTGGAAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1283863 42 + 114371477 TTCCTGGCTTTCAATA-----CTACTCATTGAGTTTTAGTGTGGAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1309602 42 + 1464242 TTCCTGGCTTTCAATA-----CTACTCATTGAGTTTTAGTGTGGAAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1041042 42 + 81552678 TTCCTGGCTTTCAATA-----CTACTTATTGAGTTTTAGTGTGGAGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1369251 42 + 108979918 TTCCTGGCTTTCAATA-----CTACTCATTGAGTTTTAGTGTGGAAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1341434 42 - 111193037 TTCCTGGCTTTCAATA-----CTACTCATTGAGTTTTAGTGTGGAAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1369775 42 + 3644372 TTCCTGGCTTTCAATA-----CTACTCATTGAGTTTTAGTGTGGAAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1323857 42 - 10304083 TTCCTGGCTTTCAATA-----CTACTCATTGAGTTTTAGTGTGGAAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1394687 42 - 107702431 TTCCTGGCTTTCAATA-----CTACTCATTGAGTTTTAGTGTGGATT i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1310606 42 - 13651311 TTCCTGGCTTTCAATA-----CTACTCATTGAGTTTTAGTGTGGAAT i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 903854 47 + 5252280 TTCTTGCCTTTCGGCAACCCCCTGCTGACTGAGATTTTTTGTGGAAT i otoGar3.GL873658 I 1616 C 0 s mm10.chr12 89951172 42 - 120129022 TTCCTGCATAGGAACA-----CTCTTGGCTGAGATTTTGCATGGAGT i mm10.chr12 C 0 I 18 s dasNov3.JH576208 1603110 42 + 4416731 ATCCTGGGTTTGAACA-----CTGTTGACTGAGATTTTGCACAGAAT i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e calJac3.chr14 1318361 3323 - 108792865 I e manLeu1.NW_012103754v1 872219 1215 - 2200435 M a score=47760.000000 s hg38.chr2_KI270774v1_alt 47120 7 + 223625 TTAGTGG s panTro5.chr2A 1324011 7 + 111504155 TTAGTGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1283905 7 + 114371477 TTAGTGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1309644 7 + 1464242 TTAGTGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1041084 7 + 81552678 TTAGTGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1369293 7 + 108979918 TTAGTGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1341476 7 - 111193037 TTAGTGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1369817 7 + 3644372 TTAGTGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1323899 7 - 10304083 TTAGTGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1394729 7 - 107702431 TTAGTGG i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1310648 7 - 13651311 TTAGTGG i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 903901 7 + 5252280 TCAGTGG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1603152 7 + 4416731 TTAGTGG i dasNov3.JH576208 C 0 I 14 e mm10.chr12 89951214 18 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e calJac3.chr14 1318361 3323 - 108792865 I e manLeu1.NW_012103754v1 872219 1215 - 2200435 M a score=22187.000000 s hg38.chr2_KI270774v1_alt 47127 5 + 223625 TGTGA s panTro5.chr2A 1324018 5 + 111504155 TGTGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1283912 5 + 114371477 TGTGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1309651 5 + 1464242 TGTGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1041091 5 + 81552678 TGTGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1369300 5 + 108979918 CATGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1341483 5 - 111193037 CATGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1369824 5 + 3644372 CATGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1323906 5 - 10304083 CATGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1394736 5 - 107702431 CATGA i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1310655 5 - 13651311 CATGA i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 903908 5 + 5252280 TATGA i otoGar3.GL873658 C 0 I 13 e mm10.chr12 89951214 18 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e dasNov3.JH576208 1603159 14 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e manLeu1.NW_012103754v1 872219 1215 - 2200435 M a score=120155.000000 s hg38.chr2_KI270774v1_alt 47132 44 + 223625 CCGATTTCACTGCTAGCTAGTAA----------tttc------tttt-------attttcttttt--tg s panTro5.chr2A 1324023 43 + 111504155 CCGATTTCACTGCTAGCTAGTAA----------tttc------ttct-------tttttcttttt--t- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1283917 42 + 114371477 CCGATTTCACTGCTAGCTAGTAA----------tttc------ttct--------ttttcttttt--t- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1309656 42 + 1464242 CCGATTTCACTGCTAGCTAGTAA----------tttc------tttt--------ttttcttttt--t- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1041096 51 + 81552678 CCGATTTCACTGCTAGCTAGTAA----------tttt------ttttctttttctttttcttttt--tt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1369305 37 + 108979918 CTGATTTCACTGCTAGCTAGTAC---------------------ttt-------cttttcttttc---- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1341488 37 - 111193037 CTGATTTCACTGCTAGCTAGTAC---------------------ttt-------cttttcttttc---- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1369829 52 + 3644372 CTGATTTCACTGCTAGCTAGTACtttcttttcttttc------tttt-------cttttcttttc---- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1323911 42 - 10304083 CTGATTTCACTGCTAGCTAGTAC----------tttc------tttt-------cttttcttttc---- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1394741 58 - 107702431 CTGATTTCACTGCTAGCTAGTACtttcttttcttttcttttcttttt-------ttttttttttt---- i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1310660 44 - 13651311 CTGATTTCACTGCTAGCTAGTAC----------tttc------tttt-------cttttcttttttt-- i colAng1.NW_012118821v1 C 0 I 355 e mm10.chr12 89951214 18 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 903913 13 + 5252280 I e dasNov3.JH576208 1603159 14 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e manLeu1.NW_012103754v1 872219 1215 - 2200435 M a score=1320624.000000 s hg38.chr2_KI270774v1_alt 47176 297 + 223625 ttttgagacagagtttcactcttgttgcccaggctggagtgcaatggcacaatcttggctcactgcaacttccgcctcctgggttcaagtgattcttgtgcctcagcctcccaagtagctgtgatta-------caggcacctgccaccacgcccagttaattttttg---------tatttttttttttt-ggtagggacggcattttaccatgttggccaggctggtgtcaaactcctgacttcaggtgatccatctacctcggcctcccaaagtgctgggattacaggcgtga--------tccaccatacccagccAT s panTro5.chr2A 1324066 298 + 111504155 ttttgagacagagtttcactcttgttgcccaggctggagtgcaatggcacaatctcggctcactgcaacttccgcctcccgggttcaagtgattcttgtgcctcagcctcccaagtagctgtgatta-------caggcacctgccaccacgcccagttaatttttag---------tatttttttttttttggtagggacagcatttcaccatgttggccaggctggtgtcaaactcctgacttcaggtgatccatctacctcggcctcccaaagtgctgggattacaggcgtga--------tccaccatacccagccAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1283959 293 + 114371477 tttgtagacagagtttcactcttgttgcccaggctggagtgcaatggcacaatctcggctcactgcaacttccgcctcccgggttcaagtgattcttgtgcctcagcctcccaagtagctgtgatta-------caggcacctgccaccacgcccagttaatttttag---------tatttttttt-----ggtagggacggcatttcaccatgttggccaggctggtgtcaaactcctgacttcaggtgatccatctacctcggcctcccaaagtgctgggattacaggtgtga--------tccaccatacccagccAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1309698 306 + 1464242 ttttgagacagagtttcactcttgttgcccaggctggagtgcaatggcacaatctcggttcactgcaacttccgcctcccgggttcaagtgattcttgtgcctcagcctcccaagtagctgtgatta-------caggcacctgccaccacgcccagttaattttttgggggttttttgtttttttttttt-ggtagggatggcatttcaccatgttggccaggctggtgtcaaactcctgacttcaggtgatccatctacctcggcctcccaaagtgctgggattacaggcgtga--------tccaccatacccagccAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1041147 302 + 81552678 ttttgagac--agtttcactcttgttgcccaggctggagtgcaatggcacaatctcggctcactgcaacctccgcctcctgggttcaagtgattcttgtgcctcagcctcccaagtagctgtgatta-------caggcacctgccaccatgcccggctaattttttg--atttttttttttttctttttt-ggtagggacggcatttcaccatgttggccaggctggtgtcaaactcctgacctcaggtgatccatccacctcggcctcccaaagtgctgggattacaggcgtga--------tccaccatgcccagccAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1369342 309 + 108979918 ttttgagacagactttcactcttgttgcccaggctggagtgcggtggtacaatctcggctcactgtaacctccacctcccaggttcaagtgattcttgtgcctcagcctcctgagtagctgtgattacaggcaccaggcacctgccaccatggctggctaatgtttt------------tttttttttttt-ggtagggacagcgtttcaccatgttggccaggctggtgtcaaactcctgacctcaagtgatccatccacctcggcctcccaaagtgctgggattacgggcgtgatccaccATTCCACCATGCCTGGCCAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1341525 310 - 111193037 ttttgagacagactttcactcttgttgcccaggctggagtgcggtgttacaatctcggctcactgtaacctccacctcccgggttcaagtgattcttgtgcctcagcctcctgagtagctgtgattacaggcaccaggcacctgccaccatggctggctaatgttttg-----------tttttttttttt-ggtagggacagcatttcaccatgttggccaggctggtatcaaactcctgacctcaagtgatccatccacctcggcctcccaaagtgctgggattacgggcgtgatccaccATTCCACCATGCCTGGCCAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1369881 310 + 3644372 ttttgagacagactttcactcttgttgcccaggctggagtgcggtggtacaatctcggctcactgtaacttccacctcccgggttcaagtgattcttgtgcctcagcctcctgagtagctgtgattacaggcaccaggcacctgccaccatggctggctaattttttt-----------tttttttttttt-ggtagggacagcgtttcaccatgttggccaggctggtgtcaaactcctgacctcaagtgatccatccacctcggcctcccaaagtgctgggattacgggcgtgatccaccATTCCACCATGCCTGGCCAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1323953 309 - 10304083 ttttgagacagactttcactcttgttgcgcaggctggagtgcagtggtacaatctcggctcactgtaacctccacctcccgggttcaagtgattcttgtgccttagcctcctgagtagctgtgattacaggcaccaggcacctgccaccatggctggctaatgttgt------------tttttttttttt-ggtagggacagcgtttcaccatgttggccaggctgatgtcaaactcctgacctcaggtgatccatccacctcggcctcccaaagtgctgggattacgggcgtgatccaccATTCCACCATGCCTGGCCAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1394799 306 - 107702431 ttttttgacagactttcactcttgttgcccaggctggagtgcgatggtgcaatctcggctcactgcaacctccacctcccgggttcaagtgattcttgtgcctcagcctcccgagtagctgtgattacaggcaccaggcacctgccaccatggctggctaaggt---------------gttttttttttt-ggtagggacagcgtttcaccatgttggccaggctggtgtcgaactcctgacctcaggtgatccatgcacctcggcctcccaaagtgctgggattacaggcgtgatccaccATTCCACCATGCCTGGCCAC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1311059 314 - 13651311 ttttgagacagactttcactcttgttgcccaggctggagtgcagtggtgcaatctcggctcactgcaacatctgtctcccgggttcaagtgattcttgtgccttagcctcccgagtagctgtgattacaggcaccaggcacctgccaccatgactggctaatgttttg-------ttttgttttttttttt-ggtagggacagtgtttcactatgttggccagactggtgtggaactcctgacctcaggtgatccatccacctcggcctcccaaagtgctgggattacaggcgtgacccaccATTCCACCATGCCTAGCCAC i colAng1.NW_012118821v1 I 355 C 0 e mm10.chr12 89951214 18 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 903913 13 + 5252280 I e dasNov3.JH576208 1603159 14 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e manLeu1.NW_012103754v1 872219 1215 - 2200435 M a score=19206.000000 s hg38.chr2_KI270774v1_alt 47473 3 + 223625 TGC s panTro5.chr2A 1324364 3 + 111504155 TGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1284252 3 + 114371477 TGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1310004 3 + 1464242 TGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1041449 3 + 81552678 TGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1369651 3 + 108979918 TGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1341835 3 - 111193037 TGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1370191 3 + 3644372 TGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1324262 3 - 10304083 TGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1395105 3 - 107702431 TGC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1311373 3 - 13651311 TGC i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 903926 3 + 5252280 TGC i otoGar3.GL873658 I 13 C 0 e mm10.chr12 89951214 18 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e dasNov3.JH576208 1603159 14 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e manLeu1.NW_012103754v1 872219 1215 - 2200435 M a score=14196.000000 s hg38.chr2_KI270774v1_alt 47476 2 + 223625 TA s panTro5.chr2A 1324367 2 + 111504155 TA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1284255 2 + 114371477 TA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1310007 2 + 1464242 TA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1041452 2 + 81552678 TA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1369654 2 + 108979918 TA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1341838 2 - 111193037 TA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1370194 2 + 3644372 TA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1324265 2 - 10304083 TA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1395108 2 - 107702431 TA i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1311376 2 - 13651311 TA i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 903929 2 + 5252280 TA i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89951232 2 - 120129022 TA i mm10.chr12 I 18 C 0 e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e dasNov3.JH576208 1603159 14 + 4416731 I e calJac3.chr14 1318361 3323 - 108792865 I e manLeu1.NW_012103754v1 872219 1215 - 2200435 M a score=895599.000000 s hg38.chr2_KI270774v1_alt 47478 146 + 223625 GTACTTTC-AAAG-ATTATGCAGTGTAACTTCAACTTATGGTACCAAAAACTATTGATGTTG-TTTTGA-ATATGTGCATTATTACTGGTAGCTGTTTGGCTTCTTATTTC--TGTGCATTGTGCTATTATTGGATACATCTT--GGGAACTTG s panTro5.chr2A 1324369 146 + 111504155 GTACTTTC-AAAG-ATTATGCAGTATAACTTCAACTTATGGTACCAAAAACTATTGATGTTG-TTTTGA-GTATGTGCATTATTACTGGTAGCTATTTGGCTTCTTATTTC--TGTGCATTGTGCTATTATTGGATACATCTT--GGGAACTTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1284257 146 + 114371477 GTACTTTC-AAAG-ATTATGCAGTATAACTTCAACTTATGGTACCAAAAACTATTGATGTTG-TTTTGA-GTATGTGCATTATTACTGGTAGCTATTTGGCTTCTTATTTC--TGTGCATTGTGCTATTATTGGATACATCTT--GGGAACTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1310009 146 + 1464242 GTACTTTC-AAAG-ACTATGCAGTGTAACTTCAACTTATGGTACCAAAAACTATTGATGTTG-TTTTGA-ATATGTGCATTATTACTGGTAGCTGTTTGGCTTCTTATTTC--TGTGCATTATGCCATTATTGGATACATCTT--GGGAACTTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1041454 146 + 81552678 GTACTTTC-AAAG-ATTATGCAGTGTAACTTCAACTTACGATACCAAAAATTATTGATGTTG-TTTTGA-ATGTGTGCATTATTACTGGTAGCTGTTTGGCTTCTTATTTC--TGTGCATTGTGCTATTATTGGATACATCTT--GGGAGGTTG i nomLeu3.chr19 C 0 M 119 s rheMac8.chr13 1369656 146 + 108979918 GTACTTTC-AAAG-ATTATGGAGTGTAACTTCAACTTATGATACCAAAAATTATTGATGTTG-TTTTGA-ATGCCTGCATTATTACTGGTAGCTGTTTGGCTTCTTATTTC--TGTGCATTGTGCTATTACTGGATACATCTT--GGGAACTTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1341840 146 - 111193037 GTACTTTC-AAAG-ATTATGGAGTGTAACTTCAACTTATGATACCAAAAATTATTGATGTTG-TTTTGA-ATGCCTGCATTATTACTGGTAGCTGTTTGGCTTCTTATTTC--TGTGCATTGTGCTATTACTGGATACATCTT--GGGAACTTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1370196 146 + 3644372 GTACTTTC-AAAG-ATTATGGAGTGTAACTTCAACTTATGATACCAAAAATTATTGATGTTG-TTTTGA-ATGCCTGCATTATTACTGGTAGCTGTTTGGCTTCATATTTC--TGTGCATTGTGCTATTACTGGATGCATCTT--GGGAACTTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1324267 145 - 10304083 GTACTTTC-AAAG-ATTATGGAGTGTAACTTCAACTTATGATACCAAAAATTATTGATGTTG-TTTTGA-ATGCCTGCATTATTACTGGTAGCTGTTTGGCTTCTTATTTC--TGTGCATTGTGCTATTACT-GATACATCTT--GGGAACTTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1395110 146 - 107702431 GTACTTTC-AAAG-ATTATGCAGTGTAACTTCAACTTATGATACCAAAAATTATTGATGTTG-TTTTGA-ATGCCTGCATTATTACTGGTAGCTGTTTGGCTTCTTATTTC--CATGCATTGTGCTATTACTGGATACATCTT--GGGAACTTG i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1311378 146 - 13651311 GTACTTTC-AAAG-ATTATGCAGTGTAACTTCAACTTATGATACCAAAAATTATTGATGTTG-TTTTGA-ATGCCTGCATTATTACTGGTAGCTGTTTGTCTTCTTATTTC--TGTGCATTGTGCTATTACTGGATACATCTT--GGGAACTTG i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 903931 145 + 5252280 ATACTTTC-AAAG-ATTTTGCCATGTGGCTTCAGCTTATGATACCGAGAAC-ATTGATGTTACTTTTGC-ATGTGTTCTTTA-TGCTGGTGGCTATTTGGCTCCTGGTTTC--CAGGCATTGTGTTATTATAGGATAAAGCTT--GGGAACTTG i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89951234 148 - 120129022 GTCTTTTCAAAAA-AATTTTTGATGTGGCTTCAAATTACCATGCCAGGAAATACCAAGGCTG-CTTTGAGATGTGTGTCTCAATACCAGTGGCCATCTGGCTGCTTCTTCT--AGTTCGCCATGCTGTTATTGAGCAAACCGT--AGGAATTTG i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1603173 152 + 4416731 GTTCTGCC-AGAGAATTTTGCAATGCAGCTTCGAGTTATAATGCCAGAAGTTACTGGTGTTTCTTTTGG-ATTTGTGCATTAATACTGGTGACCAGTTGGCATCTTGTTTCAGTGTGTATTGTGCTATCATTGACTAAATCTTCAGGGTGCTTG i dasNov3.JH576208 I 14 C 0 e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e calJac3.chr14 1318361 3323 - 108792865 I e manLeu1.NW_012103754v1 872219 1215 - 2200435 M a score=152582.000000 s hg38.chr2_KI270774v1_alt 47624 27 + 223625 TAAAGCAATTTTCAGTTTCTATGTATA s panTro5.chr2A 1324515 27 + 111504155 TAAAGCAATTTTCAATTTCTATGTATA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1284403 27 + 114371477 TAAAGCAATTTTCAATTTCTATGTATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1310155 27 + 1464242 TAAAGCAATTTTCAATTTCTATGTATA i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1369802 27 + 108979918 TAAAGCAATTTTTAATTTGTATGTATA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1341986 27 - 111193037 TAAAGCAATTTTTAATTTGTATGTATA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1370342 27 + 3644372 TAAAGCAATTTTCAATTTGTATGTATA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1324412 27 - 10304083 TAAAGCAATTTTCAATTTGTATGTATA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1395256 27 - 107702431 TAAAGCAATTTTCAATTTGTATGTATA i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1311524 27 - 13651311 TAAAGCAATTTTCAATTTGTATGTATA i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 904076 27 + 5252280 CAGAGCAATCTTCACCTTGTGTATATA i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89951382 27 - 120129022 TAAAGCAATTTTCAGCTTTTGTACAGA i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1603325 27 + 4416731 AAAAGCAATTTCCAATTTACATATGTA i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e calJac3.chr14 1318361 3323 - 108792865 I e manLeu1.NW_012103754v1 872219 1215 - 2200435 M e nomLeu3.chr19 1041600 119 + 81552678 M a score=19833.000000 s hg38.chr2_KI270774v1_alt 47651 4 + 223625 AAAC s panTro5.chr2A 1324542 4 + 111504155 AAAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1284430 4 + 114371477 AAAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1310182 4 + 1464242 AAAC i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1369829 4 + 108979918 AAAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1342013 4 - 111193037 AAAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1370369 4 + 3644372 AAAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1324439 4 - 10304083 AAAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1395283 4 - 107702431 AAAC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1311551 4 - 13651311 AAAC i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 904103 4 + 5252280 ATGC i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89951409 4 - 120129022 AAGC i mm10.chr12 C 0 I 9 e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e dasNov3.JH576208 1603352 0 + 4416731 C e calJac3.chr14 1318361 3323 - 108792865 I e manLeu1.NW_012103754v1 872219 1215 - 2200435 M e nomLeu3.chr19 1041600 119 + 81552678 M a score=49165.000000 s hg38.chr2_KI270774v1_alt 47655 10 + 223625 CAAAACCCTg s panTro5.chr2A 1324546 10 + 111504155 CAAAACCCTg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1284434 10 + 114371477 CAAAACCCTg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1310186 10 + 1464242 CAAAACCCTg i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1369833 10 + 108979918 CAAAACCCTg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1342017 10 - 111193037 CAAAACCCTg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1370373 10 + 3644372 CAAAACCCTg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1324443 10 - 10304083 CAAAACCCTg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1395287 10 - 107702431 CAAAACCCTg i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1311555 10 - 13651311 CAAAACCCTg i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 904107 10 + 5252280 CAAGACACTG i otoGar3.GL873658 C 0 I 42 e mm10.chr12 89951413 9 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e dasNov3.JH576208 1603352 0 + 4416731 C e calJac3.chr14 1318361 3323 - 108792865 I e manLeu1.NW_012103754v1 872219 1215 - 2200435 M e nomLeu3.chr19 1041600 119 + 81552678 M a score=158204.000000 s hg38.chr2_KI270774v1_alt 47665 39 + 223625 gccgggcgcggtggctcacgcctgaaatcccagcacttt s panTro5.chr2A 1324556 39 + 111504155 gccgggcacggtggctcatgcctgtaatcccagcacttt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1284444 39 + 114371477 gccaggcgcggtggctcatgcctgtaatcccagcacttt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1310196 39 + 1464242 gccgggcgtggtggctcacgcctgtaatcccagcacttt i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1369843 39 + 108979918 gccgggcgcggtggctcacgcctgtaatcccagcacttt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1342027 39 - 111193037 gccgggcgcggtggctcacgcctgtaatcccagcacttt i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1370383 39 + 3644372 gccgggcgcggtggctcacgcctgtaatcccagcacttt i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1324453 39 - 10304083 gccgggcgcggtgactcacgcctgtaatcccagcacttt i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1395297 39 - 107702431 gctgggcgcggtggctcacgcctgtaatcccagcacttt i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1311565 39 - 13651311 gccgggcgtggtggctcacgcctgtaatcccagtacttt i colAng1.NW_012118821v1 C 0 C 0 e mm10.chr12 89951413 9 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 904117 42 + 5252280 I e dasNov3.JH576208 1603352 0 + 4416731 C e calJac3.chr14 1318361 3323 - 108792865 I e manLeu1.NW_012103754v1 872219 1215 - 2200435 M e nomLeu3.chr19 1041600 119 + 81552678 M a score=105127.000000 s hg38.chr2_KI270774v1_alt 47704 87 + 223625 gggagtccggtgctggcggatcacaaggtcaggaaatcgagaccatcctggctaacac-atgaaaccccgtctccactaaaaatacaa s panTro5.chr2A 1324595 87 + 111504155 gggaggccggtgccggtggatcacgaggtcaggagatcgagaccatcctggctaacac-atgaaaccccgtctccactaaaaatacaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1284483 87 + 114371477 gggaggccggtgccggtggatcacgaggtcaggagatcgagaccatcctggctaacac-atgaaaccccgtctccactaaaaatacaa i panPan2.chr2A C 0 M 1002 s gorGor5.CYUI01015607v1 1310235 87 + 1464242 gggaggccggtgccggcggatcatgaggtcaggagatcgagaccatcctggctaacac-atgaaaccccatctccactaaaaatacaa i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1369882 58 + 108979918 ------------------------------aggaggccgagaccatcctggctaacacggtgaaaccccatctctactaaaaatacaa i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1342066 58 - 111193037 ------------------------------aggaggccgagaccatcctggctaacacggtgaaaccccatctctactaaaaatacaa i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1370422 58 + 3644372 ------------------------------aggaggccgagaccatcctggctaacacggtgaaaccccatctctactaaaaatacaa i macNem1.NW_012011978v1 C 0 C 0 e mm10.chr12 89951413 9 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 904117 42 + 5252280 I e dasNov3.JH576208 1603352 0 + 4416731 C e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1311604 0 - 13651311 C e manLeu1.NW_012103754v1 872219 1215 - 2200435 M e chlSab2.chr14 1395336 0 - 107702431 C e cerAty1.NW_012000820v1 1324492 0 - 10304083 C e nomLeu3.chr19 1041600 119 + 81552678 M a score=29239.000000 s hg38.chr2_KI270774v1_alt 47791 25 + 223625 aaaaAAAA--TTAgccaggcatggtgg s panTro5.chr2A 1324682 27 + 111504155 aaaaAAAAAATTAgccaggcatggcgg i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1310322 26 + 1464242 -aaaaAAAAATTAgccaggcatggtgt i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1369940 25 + 108979918 --aaaaaaaattagccaggcatggtgg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1342124 25 - 111193037 --aaaaaaaattagccaggcatggtgg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1370480 25 + 3644372 --aaaaaaaattagccaggcatggtgg i macNem1.NW_012011978v1 C 0 C 0 e mm10.chr12 89951413 9 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 904117 42 + 5252280 I e dasNov3.JH576208 1603352 0 + 4416731 C e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1311604 0 - 13651311 C e manLeu1.NW_012103754v1 872219 1215 - 2200435 M e chlSab2.chr14 1395336 0 - 107702431 C e cerAty1.NW_012000820v1 1324492 0 - 10304083 C e nomLeu3.chr19 1041600 119 + 81552678 M e panPan2.chr2A 1284570 1002 + 114371477 M a score=8302.000000 s hg38.chr2_KI270774v1_alt 47816 10 + 223625 tgggcgcctg s panTro5.chr2A 1324709 10 + 111504155 tgggcgcctg i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1310348 10 + 1464242 tgggcgcctg i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1369965 10 + 108979918 caggcgcctg i rheMac8.chr13 C 0 C 0 s macNem1.NW_012011978v1 1370505 10 + 3644372 caggcgcctg i macNem1.NW_012011978v1 C 0 C 0 e mm10.chr12 89951413 9 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 904117 42 + 5252280 I e dasNov3.JH576208 1603352 0 + 4416731 C e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1311604 0 - 13651311 C e manLeu1.NW_012103754v1 872219 1215 - 2200435 M e chlSab2.chr14 1395336 0 - 107702431 C e cerAty1.NW_012000820v1 1324492 0 - 10304083 C e macFas5.chr13 1342149 0 - 111193037 C e nomLeu3.chr19 1041600 119 + 81552678 M e panPan2.chr2A 1284570 1002 + 114371477 M a score=11719.000000 s hg38.chr2_KI270774v1_alt 47826 45 + 223625 tagtcccagctacttgggaggccgagatgggcggatcacgaggtc s panTro5.chr2A 1324719 45 + 111504155 tagtcccagctacttgggaggccgagatgggtggatcacgaggtc i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1310358 44 + 1464242 tagtcccagctacttgggaggccgagat-ggcggatcacgaggtc i gorGor5.CYUI01015607v1 C 0 C 0 e mm10.chr12 89951413 9 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 904117 42 + 5252280 I e dasNov3.JH576208 1603352 0 + 4416731 C e calJac3.chr14 1318361 3323 - 108792865 I e colAng1.NW_012118821v1 1311604 0 - 13651311 C e manLeu1.NW_012103754v1 872219 1215 - 2200435 M e chlSab2.chr14 1395336 0 - 107702431 C e cerAty1.NW_012000820v1 1324492 0 - 10304083 C e macNem1.NW_012011978v1 1370515 0 + 3644372 C e macFas5.chr13 1342149 0 - 111193037 C e rheMac8.chr13 1369975 0 + 108979918 C e nomLeu3.chr19 1041600 119 + 81552678 M e panPan2.chr2A 1284570 1002 + 114371477 M a score=86362.000000 s hg38.chr2_KI270774v1_alt 47871 76 + 223625 aggaggtcgagaccatcctggctaacatggtgaaacaccatctctactaaaaataccaaaaaaaaaaaaaaaaa-tt s panTro5.chr2A 1324764 77 + 111504155 aggaggtcgagaccatcctggctaacatggtgaaacaccatctctactaaaaataccaaaaaaaaaaaaaaaaaatt i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1310402 76 + 1464242 aggaggtcgagaccatcctggctaacatggggaaacaccatctctactaaaaatatcaaaaaaaaaaaaaaaaa-tt i gorGor5.CYUI01015607v1 C 0 C 0 s cerAty1.NW_012000820v1 1324492 69 - 10304083 aggaggccgagaccatcctggctaacacggtgaaaccccatctctactaaaaatac-------aaaaaaaaaaa-tt i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1395336 70 - 107702431 aggaggccgagaccatcctggctaacacggtgaaacaccatctctactaaaaatac------aaaaaaaaaaaa-tt i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1311604 70 - 13651311 aggaggccgagaccatcctggctaacacggtgaaaccccatctctactaaaaatac------aaaaaaaaaaaa-tt i colAng1.NW_012118821v1 C 0 C 0 e mm10.chr12 89951413 9 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 904117 42 + 5252280 I e dasNov3.JH576208 1603352 0 + 4416731 C e calJac3.chr14 1318361 3323 - 108792865 I e manLeu1.NW_012103754v1 872219 1215 - 2200435 M e macNem1.NW_012011978v1 1370515 0 + 3644372 C e macFas5.chr13 1342149 0 - 111193037 C e rheMac8.chr13 1369975 0 + 108979918 C e nomLeu3.chr19 1041600 119 + 81552678 M e panPan2.chr2A 1284570 1002 + 114371477 M a score=20192.000000 s hg38.chr2_KI270774v1_alt 47947 15 + 223625 agctgggtgtggtca s panTro5.chr2A 1324841 15 + 111504155 agctgggtgtggtca i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1285580 15 + 114371477 agctgggtgtggtca i panPan2.chr2A M 1002 C 0 s gorGor5.CYUI01015607v1 1310478 15 + 1464242 agctgggtgtggtca i gorGor5.CYUI01015607v1 C 0 C 0 s cerAty1.NW_012000820v1 1324561 15 - 10304083 agccaggcatggtgg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1395406 15 - 107702431 agccgggcatggtgg i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1311674 15 - 13651311 agctgggcgaggtgg i colAng1.NW_012118821v1 C 0 C 0 e mm10.chr12 89951413 9 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 904117 42 + 5252280 I e dasNov3.JH576208 1603352 0 + 4416731 C e calJac3.chr14 1318361 3323 - 108792865 I e manLeu1.NW_012103754v1 872219 1215 - 2200435 M e macNem1.NW_012011978v1 1370515 0 + 3644372 C e macFas5.chr13 1342149 0 - 111193037 C e rheMac8.chr13 1369975 0 + 108979918 C e nomLeu3.chr19 1041600 119 + 81552678 M a score=22342.000000 s hg38.chr2_KI270774v1_alt 47962 10 + 223625 caggcaccta s panTro5.chr2A 1324856 10 + 111504155 caggcaccta i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1285595 10 + 114371477 caggcaccta i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1310493 10 + 1464242 caggcaccta i gorGor5.CYUI01015607v1 C 0 C 0 s macFas5.chr13 1342149 10 - 111193037 caggcgcctg i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1324576 10 - 10304083 caggcgcctg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1395421 10 - 107702431 caggcgcctg i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1311689 10 - 13651311 cgggcgcctg i colAng1.NW_012118821v1 C 0 C 0 e mm10.chr12 89951413 9 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 904117 42 + 5252280 I e dasNov3.JH576208 1603352 0 + 4416731 C e calJac3.chr14 1318361 3323 - 108792865 I e manLeu1.NW_012103754v1 872219 1215 - 2200435 M e macNem1.NW_012011978v1 1370515 0 + 3644372 C e rheMac8.chr13 1369975 0 + 108979918 C e nomLeu3.chr19 1041600 119 + 81552678 M a score=277624.000000 s hg38.chr2_KI270774v1_alt 47972 75 + 223625 tagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccaggaggcggagcttgcagtgagcagagg s panTro5.chr2A 1324866 75 + 111504155 tagtcccagctactcaggaggctgaggcaggagaatggtgtgaacccaggaggcggagcttgcagtgagcggagg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1285605 75 + 114371477 tagtcccagctactcaggaggctgaggcaggagaatggtgtgaacccaggaggcggagcttgcagtgagcggagg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1310503 75 + 1464242 tagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccaggaggcggagcttgcagtgagcagagg i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1369975 75 + 108979918 tagtcccagctactcaggaggctgaggcgggagaatggagtgaacccgggaggtggagcttgcagtgagcccaca i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1342159 75 - 111193037 tagtcccagctactcaggaggctgaggcgggagaatggagtgaacccgggaggtggagcttgcagtgagcccaca i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1370515 75 + 3644372 tagtcccagctactcaggaggctgaggcaggagaatggagtgaacccgggaggcggagcttgcagtgagcccaca i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1324586 75 - 10304083 tagtcccagctactcaggaggctgaggcgggagaatggagtgaacccgggaggtggagcttgcagtgagcccaca i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1395431 74 - 107702431 tcgtcccagctactcaggaggctgaggcgggagaatggagtgaaccc-ggaggcggagcttgcagtgagcccaca i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1311699 72 - 13651311 tagtcccagctact---gaggctgaggcaggagaatggagtgaacccgggaggcagagcttgcagtgagcccaca i colAng1.NW_012118821v1 C 0 C 0 e mm10.chr12 89951413 9 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 904117 42 + 5252280 I e dasNov3.JH576208 1603352 0 + 4416731 C e calJac3.chr14 1318361 3323 - 108792865 I e manLeu1.NW_012103754v1 872219 1215 - 2200435 M e nomLeu3.chr19 1041600 119 + 81552678 M a score=253511.000000 s hg38.chr2_KI270774v1_alt 48047 62 + 223625 ttgtgccactgcactccagcctgggcgacagagtgagattccgtctcaaaaaaaataaaaTT s panTro5.chr2A 1324941 62 + 111504155 ttgtgccactgcactccagcctgggcgacagagtaagattccgtctcgaaaaaaataaaata i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1285680 62 + 114371477 ttgtgccactgcactccagcctgggcgacagagtaagattccgtctcgaaaaaaataaaata i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1310578 62 + 1464242 ttgtgccactgcactccagcctgggcaacaaagtgagattccgtctcgaaaaaaataaaata i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1041719 56 + 81552678 ttgtaccactgcactccagcctgggcaacagagcgagattctgtctcgaa------aaaata i nomLeu3.chr19 M 119 C 0 s rheMac8.chr13 1370050 58 + 108979918 ttgtgccactgtactccagcctgggcaac----agagattctgtctcgaaaaaaataaaata i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1342234 58 - 111193037 ttgtgccactgtactccagcctgggcaac----agagattctgtctcgaaaaaaataaaata i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1370590 58 + 3644372 ttgtgccactgtactccagcctgggcaac----agagattctgtctcgaaaaaaataaaata i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1324661 58 - 10304083 ttgtgccactgtactccagcctgggcgac----agagattctgtcttgaaaaaaataaaata i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1395505 62 - 107702431 ctgtgccactgcactccagcctgggtgacagagagagattctgtctcgaaaaaaataaaata i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1311771 62 - 13651311 ttttgccactgcactccagcctgggcgacagagagagattctgtctcgaaaaaaataaaata i colAng1.NW_012118821v1 C 0 C 0 e mm10.chr12 89951413 9 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 904117 42 + 5252280 I e dasNov3.JH576208 1603352 0 + 4416731 C e calJac3.chr14 1318361 3323 - 108792865 I e manLeu1.NW_012103754v1 872219 1215 - 2200435 M a score=67283.000000 s hg38.chr2_KI270774v1_alt 48109 13 + 223625 AACCCAAAACCCT s panTro5.chr2A 1325003 13 + 111504155 aaCCCAAAACCCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1285742 13 + 114371477 aaCCCAAAACCCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1310640 13 + 1464242 aaCCCAAAACCCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1041775 13 + 81552678 aaCCCCAAACCCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1370108 13 + 108979918 aaCCCAAAACCCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1342292 13 - 111193037 aaCCCAAAACCCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1370648 13 + 3644372 aaCCCAAAACCCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1324719 12 - 10304083 aaCCC-AAACCCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1395567 13 - 107702431 aaCCCAAAACCCT i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1311833 13 - 13651311 aaCCCAAAACTCT i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1603352 13 + 4416731 AAACTAAGACCCT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89951413 9 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 904117 42 + 5252280 I e calJac3.chr14 1318361 3323 - 108792865 I e manLeu1.NW_012103754v1 872219 1215 - 2200435 M a score=44694.000000 s hg38.chr2_KI270774v1_alt 48122 6 + 223625 GAAGCA s panTro5.chr2A 1325016 6 + 111504155 GAAGCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1285755 6 + 114371477 GAAGCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1310653 6 + 1464242 GAAGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1041788 6 + 81552678 GAAGCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1370121 6 + 108979918 GAAGCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1342305 6 - 111193037 GAAGCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1370661 6 + 3644372 GAAGCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1324731 6 - 10304083 GAAGCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1395580 6 - 107702431 GAAGCA i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1311846 6 - 13651311 GAAGCA i colAng1.NW_012118821v1 C 0 C 0 s mm10.chr12 89951422 6 - 120129022 GAAGCA i mm10.chr12 I 9 C 0 s dasNov3.JH576208 1603365 6 + 4416731 GAAGCA i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 904117 42 + 5252280 I e calJac3.chr14 1318361 3323 - 108792865 I e manLeu1.NW_012103754v1 872219 1215 - 2200435 M a score=35719.000000 s hg38.chr2_KI270774v1_alt 48128 6 + 223625 TGAATG s panTro5.chr2A 1325022 6 + 111504155 TGAATG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1285761 6 + 114371477 TGAATG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1310659 6 + 1464242 TGAATG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1041794 6 + 81552678 TGAATG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1370127 6 + 108979918 TGAGTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1342311 6 - 111193037 TGAGTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1370667 6 + 3644372 TGAGTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1324737 6 - 10304083 TGAGTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1395586 6 - 107702431 TGAGTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 873434 6 - 2200435 TGAGTG i manLeu1.NW_012103754v1 M 1215 C 0 s colAng1.NW_012118821v1 1311852 6 - 13651311 TGAATG i colAng1.NW_012118821v1 C 0 C 0 s mm10.chr12 89951428 6 - 120129022 TCCAGG i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1603371 6 + 4416731 TAAGTG i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e otoGar3.GL873658 904117 42 + 5252280 I e calJac3.chr14 1318361 3323 - 108792865 I a score=2147970.000000 s hg38.chr2_KI270774v1_alt 48134 343 + 223625 ATATG-------GTCATTATGGCTCTTTT-----------TCTCCAAAAGTCCCTTT--AAAGCTCAGTAATT--GCTATTTGGA--------AACACATACATACATTGAATTACAAT---ATGTGCTAAGTTTGCAAGAACCTTGTGTTTCTTCTAGAAAGCTACTTGG-TTTTTTTTTT--CCTCTA-ACAGGGATAAGTCAAAATGAATAA------AAGATT----TTG-------------------------AGTACAGTCTCACGCTTT-----------------------GGGTATGATTGGC--GAATCCAGCTTGAATT-------------AAAGTTTAACACAAGGGCT------------------------------------------GGG-----CAGGCCCTGGGTTCCACTCATGACCAGAGTGAGGG--ATGCTGGTTACCAAGTG-TAATGACGCTTTATGAAACTACCTAAAGACTATGA s panTro5.chr2A 1325028 345 + 111504155 ATATG-------GTCATTATGGCTCTTTT-----------TCTCCAAAAGTCCCTTT--AAAGCTCAGTAATT--GCTATTTGGA--------AACACATACATACATTGAATTACAAT---ATGTGCTAAGTTTGCAAGAACCTTGTGTTTCTTCTAGAAAGCTACTTGT-TTTTTTTTTTTTCCTCTA-ACAGGGATAAGTCAAAATGAATAA------AAGATT----TTG-------------------------AGTACAGTCTCACGCTTT-----------------------GGGTATGATTGGC--AAATCCAGCTTGAATT-------------AAAGTTTAACACAAGGGCT------------------------------------------GGG-----CAGGCCCTGGGTTCCACTCATGACCAGAGTGAGGG--ATGCTGGTTACCAAGTG-TAATGACGCTTTATGAAACTACCTAAAGACTATGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1285767 339 + 114371477 ATATG-------GTCATTATGGCTCTTTT-----------TCTCCAAAAGTCCCTTT--AAAGCTCAGTAATT--GCTATTTGGA--------AAC----ACATACATTGAATTACAAT---ATGTGCTAAGTTTGCAAGAACCTTGTGTTTCTTCTAGAAAGCTACTTGT-TTTTTTTTTT--CCTCTA-ACAGGGATAAGTCAAAATGAATAA------AAGATT----TTG-------------------------AGTACAGTCTCACGCTTT-----------------------GGGTATGATTGGC--AAATCCAGCTTGAATT-------------AAAGTTTAACACAAGGGCT------------------------------------------GGG-----CAGGCACTGGGTTCCACTCATGACCAGAGTGAGGG--ATGCTGGTTACCAAGTG-TAATGACGCTTTATGAAACTACCTAAAGACTATGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1310665 342 + 1464242 ATATG-------GTCATTATGGCTCTTTT-----------TCTCCAAAAGTCCCTTT--AAAGCTCAGTAATT--ACTATTTGGA--------AACACATACATACATTGAATTACAAT---ATGTGCTAAGTTTGCAAGAACCTTATGTTTCTTCTAGAAAGCTACTT-T-TTTTTTTTTT--CCTCTA-ACAGGGATAAGTCAAAATGAATAA------AAGATT----TTG-------------------------AGTACAGTCTCACGCTTT-----------------------GGGTATGATTGGC--GAATCCAGCTTGAATT-------------AAAGTTTAACACAAGGGCT------------------------------------------GGG-----CAGGCCCTGGGTTCCACTCATGACCAGAGTGAGGG--ATGCTGGTTACCAAGTG-TAATGATGCTTTATGAAACTACCTAAAGACTATGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1041800 335 + 81552678 GTATG-------GTCATTATGGCTGTTTT-----------TCTCCAAAAGTCCCTTC-AAAAGCTCAGTAATT--GCTATTTGGA--------A------ACACACATTGAATTACGAC---ATGTGCTGAGTTTGCAAGAACCCTGTGTTTCTTCTAGAAAGCTACTTGG-TTTTTTT-----CCTCTA-ACAGGGATAAGTCAAAACGAATAA------AAGATT----TTG-------------------------AGTACAGTCTCACGCTTT-----------------------GGGTATGACTGGT--GAATCCAGCTTGAATT-------------AAAGTTTAACACAAGGGCT------------------------------------------GGG-----CAGGCCCTGGGTTCCACCCACGACCACAGTGAGGG--ATGCTGGTTACCAAGTG-TAATGACACTTTATGAAACTACCTAAAGACTATGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1370133 341 + 108979918 ATATG-------GTCATTATGGCTCTTTT-----------TCTCCAAAAGTCCCTTC-AAAAGTTCAGTAATT--ACTATTTGGA--------AACACATACATACATTAAATTACAAT---ATGCGCTAAGTTTGCAAGAACCTTGTGTTTCTTCTAGAAAGCTACTTGG-TTTTTTT-----CCTCTA-ACAGGGATAAGTTAAAATGAATAA------AAGATT----TTA-------------------------AGTACAGTCTCACGCTTT-----------------------GGGTATGACTGGT--GAATCCAGCTTGAGTT-------------AAAGTTTAACACAAGGGCT------------------------------------------AGG-----CAGGCCCTGGGTTCCACTCACGACCAGAGTGAGGG--ATGCTGGTTTCCAAGTG-TAATGACCCTTTATGAAACTACCTAAAGACTATGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1342317 341 - 111193037 ATATG-------GTCATTATGGCTCTTTT-----------TCTCCAAAAGTCCCTTT-AAAAGTTCAGTAATT--ACTATTTGGA--------AACACATACATACATTAAATTACAAT---ATGCGCTAAGTTTGCAAGAACCTTGTGTTTCTTCTAGAAAGCTACTTGG-TTTTTTT-----CCTCTA-ACAGGGATAAGTTAAAATGAATAA------AAGATT----TTA-------------------------AGTACAGTCTCACGCTTT-----------------------GGGTATGACTGGT--GAATCCAGCTTGAGTT-------------AAAGTTTAACACAAGGGCT------------------------------------------AGG-----CAGGCCCTGGGTTCCACTCACGACCAGAGTGAGGG--ATGCTGGTTTCCAAGTG-TAATGACCCTTTATGAAACTACCTAAAGACTATGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1370673 341 + 3644372 ATATG-------GTCATTATGGCTCTTTT-----------TCTCCAAAAGTCCCTTC-AAAAGTTCAGTAATT--ACTATTTGGA--------AACACATACATACATTAAATTACAAT---ATGCGCTAAGTTTGCAAGAACCTTGTGTTTCTTCTAGAAAGCTACTTGG-TTTTTTT-----CCTCTA-ACAGGGATAAGTTAAAATGAATAA------AAGATT----TTA-------------------------AGTACAGTCTCACGCTTT-----------------------GGGTATGACTGGT--GAATCCAGCTTGAGTT-------------AAAGTTTAACACAAGGGCT------------------------------------------AGG-----CAGGCCCTGGGTTCCACTCACGACCACAGTGAGGG--ATGCTGGTTTCCAAGTG-TAATGACCCTTTATGAAACTACCTAAAGACTATGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1324743 341 - 10304083 ATATG-------GTCATTATGGCTCTTTT-----------TCTCCAAAAGTCCCTTC-AAAAGTTCAGTAATT--ACTATTTGGA--------AACACATACATACATTAAATTACAAT---GTGCGCTAAGTTTGCAAGAACCTTGGGTTTCTTCTAGAAAGCTACTTGG-TTTTTTT-----CCTCTG-ACAGGGATAAGTCAAAATGAGTAA------AAGATT----TTA-------------------------AGTACAGTCTCACGCTTT-----------------------GGGTATGACTGGT--GAATCCAGCTTGAGTT-------------AAAGTTTAACACAAGGGCT------------------------------------------AGG-----CAGGCCCTGGGTTCCACTCACGACCAGAGTGAGGG--ATGCGGGTTTCCCAGTG-TAATGACCCTCTGTGAAACTACCTAAAGACTATGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1395592 340 - 107702431 ATATG-------GTCATTATGGCTCTTTT-----------TCTCCAAAAGTCCCTTC-AAAAGTTCAGAAATT--ACTATTTGGA--------AACACATACATACATTAAATTACAAT---ATGCGCTAAGTTTGCAAGAACCTTGGGTTTCTTCTAGAAAGCTACTTGG-TTTTTTT-----CCTCTG-ACAGGGATAAGTTAAAATGAGTAA------AAGATT----TTA-------------------------AGTACAGTCTCACGCTTT-----------------------GGGTGTGACTGGT--GAATCCAGCTTGAGTT-------------AAAGTTTAACTCAAGGGCT------------------------------------------AGG-----CAGGCCCTGGGTTCCACTCACGACCAGAGTGAGGG--ATGCTGGTTTCCAAGTG-TAATGACCCTTTATGAAACTACCT-AAGACTGTGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 873440 341 - 2200435 ATATG-------GTCATTATGGCTCTTTT-----------TCTCCAAAAGTCCCTTC-AAAAGTTCAGTAATT--ACTATTTGGA--------AACACATACATACATTAAATTACAAT---ATGCGCTAAGTTTGCAAGAACCTTGTGTTTCTTCTAGAAAGCTACTTGT-TTTTTTT-----CCTCTA-ACAGGGATAAGTTAAAATGAATAA------AAGATT----TTA-------------------------AGTACAGTCTCACGCTTT-----------------------GGGTATGACTGGT--GAATCCAGCTTGAGTT-------------AAAGTTTAACACAAGGGCT------------------------------------------AGG-----CAGGCCCTGGGTTCCACTCATGACCAGAGTGAGGG--ATGTGGGTTTCCAAGTG-TAATGACCCTTTATGAAACTACCTAAAGACTATGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1311858 342 - 13651311 ATATG-------GTCATTATGGCTCTTTT-----------TCTCCAAAAGTCCCTTC-AAAAGTTCAGTAATT--ACTATTTGGA--------AACACATACATACATTAAATTACAGT---ATGTGCTAAGTTTGCAAGAACCTTGTGTTTCTTCTAGAAAGCTACTTGGTTTTTTTT-----CCTCTA-ACAGGGATAAGTCAAAATGAAGAA------AAGAAT----TTA-------------------------AGTACAGTCTCACGCTTT-----------------------GGGTATGACTGGT--GAATCCAGCTTGAGTT-------------AAAGTTTAACACAAGGGCT------------------------------------------AGG-----CAGGCCCTGGGTTCCATTCACGACCAGAGTGAGGG--ATGCTGGTTTCCAAGTG-TAATGACCCTTTATGAAACTACCCAAAGACTGTGA i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 904159 408 + 5252280 ATACA-------TCCATTATGGTTCTTTT-----------TTCCCAAATGTCCCTTTGAGAAGCTAAGTAGTT--ACTATTTGGA--------AACATA-GCACATAT--------------------TAAGTTTTCAAGAATC-TGTGT---TTCTAGAAAGTTACTTGG-TTTTTCT------CTCTT-CCATGGATAAAGCAAAATTAATAA------AAAATTGACATTgggcggcacctgtggctcaaaggagtagggcagccccatatgct-----------------------agaggtggtgggttcaaacccagccctggccaaaaaaaaaaaaaaaaAATTGACATAGGGTTTTTGGTGTAGTAGTGAGCCCACCATAAATTAAATCACAGACCAAGG-----TAGCTTGGGGGTTCTACTCACAACCAGAGTGAGGGTACCCCTGCTTAACAGGGGAAAATGCTTCTTTCTGAAACTACCTAAACATTATAA i otoGar3.GL873658 I 42 C 0 s mm10.chr12 89951434 344 - 120129022 ATGTGGGGCTCTGTGACTTTGTCCCTCCT-----------CTTACA-----CCCCTG-AGAAG----ATGATT--ATGATCAGGAGCATATACAGTATACATATATATTGAAGTAGAGT----TTCGGTAAGCTTGCAAGAACATTGTGTTTGTTCAAGAATGTTCCATGG-ACTTCCT-----CTCTTATGGAGAAAAAAATCATAAGTAATAA------AACATC----CTG-------------------------AGTATCATTTCATGGTGT-----------------------GCAGAAAACGCAC--AGG-------TGGGTT-------------GACATCCAGAGAAGCAGCT------------------------------------------AGGTAACTCAACTCAAGGATCCAACAAACAACCAGGATAGGGT--AC-CTATGTAGCAAGTA-TAGAGTTCCACTACGAAGTCCCTTTAGCAGTATGA i mm10.chr12 C 0 I 130 s dasNov3.JH576208 1603377 384 + 4416731 GTATG-------GGCATTGTGGCTCTTTTTGTTTTCGTTCTTTCAAAATGTCCCTTAAAGAGGCTCAGTAATGTATCTTTTAAAA--------AATACATATATAAATTGAATTACAGTAGTATGTATTAAGTTTGCAAGAAAC--GTGTTTCATCTAAAAAGTAACTTGG-TTTTTCT------CTGTT-TCAGGGCTAAATCACAACAAATAATTTTTTAAGTCT----CTGG------------------------AGGCTCATTTCACATTGTCTCTAGCCAGAGATTTTGACTAAGGGTATAAATAGT--GGATCCAACCTGAAGT-------------ACAGTTTAGCACGGGGACA------------------------------------------AAG-----CAGCCTCTGGATTCTACACATTTTCAGGGGAAGGA--ATAGTCAGTAACAAGTA-TAATGATTCTTTATGGAACTAGTTAAATCATAGG- i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e calJac3.chr14 1318361 3323 - 108792865 I a score=407138.000000 s hg38.chr2_KI270774v1_alt 48477 61 + 223625 AGCTTTGGCAGGAGAATACACCTCAACATCTTGAACATTTTGCTCATCACAATTTGAAATG s panTro5.chr2A 1325373 61 + 111504155 AGCTTTGGCAGGAGAATACACCTCAACATCTTGAACATTTTGCTCATCACAATTTGAAATG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1286106 61 + 114371477 AGCTTTGGCAGGAGAATACACCTCAACATCTTGAACATTTTGCTCATCACAATTCGAAATG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1311007 61 + 1464242 AGCTTTGGCAGGAGAATACACCTCAACATCTTGAACATTTTGCTCATCACAATTCGAAATG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1042135 61 + 81552678 AGCTTTGACAGGAGAATACACCTCAACATCTTGAACATTTTGCTCATCACAATTTGAAATG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1370474 61 + 108979918 AGCTGTGGCAGGAGAGTATTCCTCAACATCTTGAACATTTTGCTCATCACAACTTGAAATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1342658 61 - 111193037 AGCTGTGGCAGGAGAGTATTCCTCAACATCTTGAACATTTTGCTCATCACAACTTGAAATG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1371014 61 + 3644372 AGCTGTGGCAGGAGAGTATTCCTCAACATCTTGAACATTTTGCTCATCACAACTTGAAATG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1325084 61 - 10304083 AGCTGTGGCAGGAGAGTACACCTCAACATCCTGAACATTTTGCTCATCACAACTTGAAATG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1395932 61 - 107702431 AGCTTTGGCAAGAGAGTACACCTCAACATCTTGAACATTTTGCTCATCACAACTTGAAATG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 873781 61 - 2200435 AGCTGTGGCAGGAGAGTACTCCTCAACATCGTGAACATTTTGCTCATCACAACTTGAAATG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1312200 61 - 13651311 AGCTTTGGCAGGAGAGTATACCTCAACATCCTGAACATTGTGCTCATCACAACTTGAAACG i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 904567 61 + 5252280 AGAGTTTGCAGGAGAATACACCTACACATCTTAAACGATTTGCTCTTCATAACTTGAAAGA i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1603761 61 + 4416731 ACCTTTTACTGGAGTATATACCTAAATGTCATGAACATTTTGCTCACTGTCATCCAAAAAA i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89951778 130 - 120129022 I e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e calJac3.chr14 1318361 3323 - 108792865 I a score=619926.000000 s hg38.chr2_KI270774v1_alt 48538 93 + 223625 ATCAAAATAATTAGT----GT--------TGTAGCTGTCAATGTTAAGAGTCATTCACATGCAAAGGAAGGAACTTAATTCAACTTGGAATAAAGGAAAGGTG---------------AA s panTro5.chr2A 1325434 93 + 111504155 ATCAAAATAATTAGT----GT--------TGTAGCTGTCAATGTTAAGAGTCATTCACATGCATAGGAAGGAACTTAATTCAAATTGGAATGAAGAAAAGATG---------------AA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1286167 93 + 114371477 ATCAAAATAATTAGT----GT--------TGTAGCTGTCAATGTTAAGAGTCATTCACATGCATAGGAAGGAACTTAATTCAAATTGGAATGAAGAAAAGATG---------------AA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1311068 93 + 1464242 ATCAAAATAATTAGT----GT--------TGTAGCTGTCAATGTTAAGAGTCATTCACATGCATAGGAAGGAACTTAATTCAAATTGGAATAAAGGAAAGATG---------------AA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1042196 91 + 81552678 ATCAAAATAATTAGT----GT--------TGTAGCTGTCAATGTT--GAGTCATTCACATGCAAAGGAAGGAACTTAATTCAAATTGGAATAAAGGAAAGGTG---------------AA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1370535 93 + 108979918 ATCAAAATAATTAGT----GT--------TGTAGCTGTCAGTGTTAAGATTCCTTCACATGCAAAGGAAGGAACTTAATTCAAATTGGAATGAAGGAAAGGCG---------------AA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1342719 93 - 111193037 ATCAAAATAATTAGT----GT--------TGTAGCTGTCAGTGTTAAGATTCCTTCACATGCAAAGGAAGGAACTTAATTCAAATTGGAATGAAGGAAAGGCG---------------AA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1371075 93 + 3644372 ATCAAAATAATTAGT----GT--------TGTAGCTGTCAGTGTTAAGATTCCTTCACATGCAAAGGAAGGAACTTAATTCAAATTGGAATGAAGGAAAGGCG---------------AA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1325145 108 - 10304083 ATCAAAATAATTAGT----GT--------TGTAGCTGTCAGTGTTAAGATTCCTTCACATGCAAAGGAAGGAGCTTAATTCAAATTGGAATGAAGGAAAGGCGAAGCCTTTGGTTGCAAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1395993 93 - 107702431 ATCAAAATAATTAGT----GT--------TGTAGCTGTCAATGTTAAGATTCATTCACATGCAAAGGAAGGAACTTAATTCAAATTGGAATGAAGGAAAGGCG---------------AA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 873842 91 - 2200435 ATCAAAATAATTAGT----GT--------TGTAGCTGTCAGTGTTAAGATTCCTTCACATGCAAAGGAAGGAACTT--TTCAAATTGGAATGAAGGAAAGGCG---------------AA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1312261 93 - 13651311 ATCAAAATAATTAGT----GT--------TGTAGCTGTCAGTGTTAAGATTCATTCACATGCAAAGGAAGGAACTTAATTCACATTGGAATGAAGGAAAGGTG---------------AA i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 904628 86 + 5252280 ATCAAGATAATTG----------------TGTAGCTATCAAGGTTAAGATTCATTCACATGCAAAGG-AGGAACTCGATTCACATTAGGATGAAG--AAGGCA---------------GA i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89951908 92 - 120129022 ATCAAAGCAATTCCTTCACGC--------AGGCAAAATCAATGCCAAGCTTCACCTGCATGCAAAAGGAGGATCGT-----ACATTGGCAAGAAAAAAGAGAG---------------AA i mm10.chr12 I 130 C 0 s dasNov3.JH576208 1603822 95 + 4416731 GTCAAAACAACTGAT----GGATTAACTATGTCATTGTCAAGGTTATGATTCATTCACAAGCAAAGG-AGGAACTTAATTCAAATTGGAATAAAGGAACA-------------------- i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1171069 2787 - 7082604 I e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e calJac3.chr14 1318361 3323 - 108792865 I a score=21305.000000 s hg38.chr2_KI270774v1_alt 48631 3 + 223625 GCC s panTro5.chr2A 1325527 3 + 111504155 GCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1286260 3 + 114371477 GCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1311161 3 + 1464242 GCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1042287 3 + 81552678 GCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1370628 3 + 108979918 GTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1342812 3 - 111193037 GTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1371168 3 + 3644372 GTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1325253 3 - 10304083 GCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1396086 3 - 107702431 GCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 873933 3 - 2200435 GCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1312354 3 - 13651311 GCC i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1173856 3 - 7082604 gtt i saiBol1.JH378218 I 2787 C 0 s otoGar3.GL873658 904714 3 + 5252280 GTC i otoGar3.GL873658 C 0 I 1 s mm10.chr12 89952000 2 - 120129022 -CC i mm10.chr12 C 0 I 1 s dasNov3.JH576208 1603917 1 + 4416731 --C i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I e calJac3.chr14 1318361 3323 - 108792865 I a score=200559.000000 s hg38.chr2_KI270774v1_alt 48634 24 + 223625 TTTGGTTGCAGTCACTAGGAGGTT s panTro5.chr2A 1325530 24 + 111504155 TTTGGTTGCAGTCACTAGGAGGTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1286263 24 + 114371477 TTTGGTTGCAGTCACTAGGAGGTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1311164 24 + 1464242 TTTGGTTGCAGTCACTAGGAGGTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1042290 24 + 81552678 TTTGGTTGCAGTCACCAGGAGGTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1370631 24 + 108979918 TTCGGTTGCAGTCAGTAGGAGGTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1342815 24 - 111193037 TTCGGTTGCAGTCAGTAGGAGGTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1371171 24 + 3644372 TTTGGTTGCTGTCAGTAGGAGGTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1325256 24 - 10304083 TTTGGTTGCAGTCAGTAGGAGGTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1396089 24 - 107702431 TTTGGTTGCACTCAGTAGGAGGCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 873936 24 - 2200435 TTTGGTTGCAGTCAGTAGGAGGTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1312357 24 - 13651311 TTTGGTTGCAGTCAGTAGGAGGCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1321684 24 - 108792865 tttgGTTGCGGTCACAAGGAGGTT i calJac3.chr14 I 3323 C 0 s saiBol1.JH378218 1173859 24 - 7082604 tttgGTTGCGGTCACAAGGAGGTT i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 904718 23 + 5252280 CTGGGCGGCAGCC-CTAGGAGGTC i otoGar3.GL873658 I 1 C 0 s mm10.chr12 89952003 24 - 120129022 TTGGGTCACAGGTATAAGGAGGTG i mm10.chr12 I 1 C 0 s dasNov3.JH576208 1603918 24 + 4416731 TTTGTTTctgaaaaccaggcaatt i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1261974 4338 + 1864846 I a score=1128188.000000 s hg38.chr2_KI270774v1_alt 48658 138 + 223625 GGGGGCAGCTCCCAGCATGTTGGTACCCAATGTCCCCCAGTGTTCTTTGTGT----GTCCCCGCGT-GGGGTGTTCCTCTGTGTTGAATTCCTCTCCCGGCAGGCTGGCTCGCTGGCTCTCCACTTGGCATTAGTGGTATTAG- s panTro5.chr2A 1325554 138 + 111504155 GGGGGCGGCTCCCAGCATGTTGGTACCCAACGTCCCCCAGTGTTCTTTGTGT----GTCCCCGCGT-GGGGTGTTGCTCTGTGTTGAATTCCTCTCCCGGCAGGCTGGCTCGCTGGCTCTCCACTTGGTATTAGTGGTATTAG- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1286287 138 + 114371477 GGGGGCGGCTCCCAGCATGTTGGTACCCAACGTCCCCCAGTGTTCTTTGTGT----GTCCCCGCGT-GGGGTGTTGCTCTGTGTTGAATTCCTCTCCCGGCAGGCTGGCTCGCTGGCTCTCCACTTGGTATTAGTGGCATTAG- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1311188 138 + 1464242 GGGGGCAGCTCCCAGCATGTTGGTACCCAACGTCCCCCAGTGTTCTTTGTGT----GTCCCCGTGT-GGGGTGTTCCTCTGTGTTGAATTCCTCTCCCGGCAGGCTGGCTCACTGGCTCTCCACTTGGCATTAGTGGTATTAG- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1042314 138 + 81552678 GGGGGCAGTTCCCAGCATGTTGGTACCCAACGTCCCCCAGTGTTCTTTGTGT----GTCCCCGCAT-GGGGTGTTCCTCTGTGTTGAATTCCTCTTCCGGCAGGCTGGCTTGCTGGTTCTCCTCTTGGCGTTAGTGGTATTGG- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1370655 138 + 108979918 GGGGGCAGCTCCCAGCGTGTTGGTACCCAGTGTCCCCCAATGTTCTTTGTGT----GTCCCTGCGT-GGGGTGTTCCTCTGTGCTGAATTCCTCTTCCGACAGGCCGGCTCGCTGGCCCTCCACTTGGCGATAGTGGTGTTAG- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1342839 138 - 111193037 GGGGGCAGCTCCCAGCGTGTTGGTACCCAGTGTCCCCCAATGTTCTTTGTGT----GTCCCTGCGT-GGGGTGTTCCTCTGTGCTGAATTCCTCTTCCGACAGGCCGGCTCGCTGGCCCTCCACTTGGCGATAGTGGTGTTAG- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1371195 138 + 3644372 GGGGGCAGCTCCCAGCGTGTTGGTACCCAGTGTCCCCCAATGTTCTTTGTGT----GTCCCTGCGT-GGGGTGTTCCTCTGTGCTGAATTCCTCTTCCCACAGGCCGGCTCGCTGGCCCTCCACTTGGCGATAGTGGTGTTAG- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1325280 138 - 10304083 GGGGGCAGCTCCCAGCATGTTGGTACCCAGTGTCCCCCAATGCTCTTTGTGT----GTCCCTGCGT-GGGGTGTTCCTCTGTGCTGAATTCCTCTTCCGACAGGCTGGCTCGCTGGCTGTCCACTTGGCGATAGTGGTGATAG- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1396113 136 - 107702431 GGGGGCAGCTCCCAGCATGTTGGTACCCAGTGTCCCCCAGTGTTCTTTGTGT----GTCCCTGCGT-GGGGTGTTCCTCTGT--TGAATTCCTCTTctggcaggctggctcgctggctgTCCACTTGGCGTTAGTGGTGTTAG- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 873960 138 - 2200435 GGGGGCAGCTCCCAGCATGTTGGTACCCAGTGTCCCCCAGTGTTCTTTGTGT----GTCCCTGCGT-GGGGTGTTCCTCTGTGCTGAATTCCTCTTCCGACAGGCTGGCTCGCTGGCTGTCCACTTGGCGATAGTGGTGATAG- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1312381 138 - 13651311 GGGGGCAGCTCCCAGCATGTTGGTACCCGGTGTCCCCCAGTGTTCTCTGTGT----GTCCCCGCGT-GGGGTGTTCCTCTGTGTTGAATTCCTCTTCCAGCAGGCTGGCTCGCTGGCTCTCCACTTGGCGTTAGTGGTGTTAG- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1321708 135 - 108792865 GAGGGTAGCTCCCAGCCTGTTGGGACCCAACTTGCTTCAGTGTTCTTTGTGT----GTCCCGGTGT-GGGGTGTTCC---ATGTTGAATTCCTCTTCTGGCAGGCGGGTTTGCTCTCTCTCCACTTGGTGTTAATGGTATCAG- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1173883 136 - 7082604 GGGGGCAGCTCTTAGCCCGTTGGGACCCAACGTGCTTCAGTGTTCTTTGTGT----GTCCCCATATGGGGGTGTTCC---ATGTTGAATTCCTCTTCTGGCAGGCTGGTTTGCTGTCTCTCCACTTGGTGTTAGTGGTATCAG- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1266312 135 + 1864846 GGGGGCAGCTCCTAGCCTGCTGGGACCCAACGTACCTCAGTGTTCTTTGTGT----GTCCCTGTGT-GGGGTGTTCC---ATGTTAAATTCCTCTTCTGGCAGGCTGGTTTGCTCTCTCTCCACTTGGTGTTAGTGATATCAG- i cebCap1.NW_016107827v1 I 4338 C 0 s otoGar3.GL873658 904741 109 + 5252280 -AGGGCCTCTC-GGGCACACTGAGACCTGACGTCCC----------TGGTGT----TTC------------TGTCCCTCTGGGCTGGATTCATTTTCCTGCAGGCTCCCT------CTCACCACTTGGCAGCAACGATATCAG- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89952027 100 - 120129022 GAGGACAACTTTTAAGTGCAAGAGACCCCATACC------TGTGTCTTTTCT----CTCTCTGGCT-AGTATG----ACTTCGTGGGATTCT-----------ATTGTCCAGCTGGCTCTCCCTTT------------------ i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1603942 134 + 4416731 gagggctggctccatatagctggatcttattatcatctgatattcttttacttcccatctctgcac-cgcatgctcctccgtgttgaattcatttttt---aagcagtct------ctttccatttggtgggaaagagaaccat i dasNov3.JH576208 C 0 I 395 a score=1429231.000000 s hg38.chr2_KI270774v1_alt 48796 162 + 223625 AACACGCTTCAGGTATTCACTTCTCA--CAGCTGGTCACACCAATGTAGGCATCTTGGCCTCCCTCTCCCTGTCATCTG-TACCAAGCTGCCACTGGGCTCTGGCTGGT----------------------------------------------------CCACCTGGGTCCTGTACCTAT------TGCAAGAGAGAAGCA-------------GTTTCTAAAAGAAAGGCATG s panTro5.chr2A 1325692 162 + 111504155 AACAAGCTTCAGGTATTCACTTCTCA--CAGCTGGTCACACCAATGTAGGCATCTTGGCCTCCCTCTCCCTGTCATCTG-TACCAAGCTGCCACTGGGCTCTGGCTGGT----------------------------------------------------CCAGCTGGGTCCTGTACCTAT------TGCAAGAGAGAAGCA-------------GTTTCTAAAAGAAAGGCATG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1286425 162 + 114371477 AACAAGCTTCAGGTATTCACTTCTCA--CAGCTGGTCACACCAATGTAGGCATCTTGGCCTCCCTCTCCCTGTCATCTG-TACCAAGCTGCCACTAGGCTCTGGCTGGT----------------------------------------------------CCAGCTGGGTCCTGTACCTAT------TGCAAGAGAGAAGCA-------------GTTTCTAAAAGAAAGGCATG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1311326 162 + 1464242 AACAAGCTTCAGGTATTCACTTCTCA--CAGCTGGTCACACCAATGTAGGCATCTTGGCCTCCCTCTCCCTGTCATCTG-TACCAAGCTGCCACTGGGCTCTGGCTGGT----------------------------------------------------CCACCTGGGTCCTATACCTAT------TGCAAGAGAGAAGCA-------------GTTTCTAAAAGAAAGGCATG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1042452 162 + 81552678 AACAAGCTTCAGGTATTCACTTCTCC--CAGCTGGTCACGCCAAAGTAGGCATCTTGGCCTCCCTCTCCCTGTCATCTG-TACCAAGCTGCCACTGGGCTCTGGCTGGT----------------------------------------------------CCACCTGGGTCCTATACCTAC------TGCAAGAGGGGAGCA-------------GTTTCTAAAAGAAAGGCATG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1370793 162 + 108979918 AACAAGCTTCAGGTATTCACTTCTCA--CAGCTGGTCACACCAAAGTAGGCATCTTGGCCTCCCTCTCCCTGTCGTCTA-TACCAAGCTGCCCCTGGGCTCTGCCTGGT----------------------------------------------------CCCCCTGGGTCCTATACCTGT------CGCAAGAGAGGAGCG-------------GTTTCTAAAAGAAAGGCATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1342977 162 - 111193037 AACAAGCTTCAGGTATTCACTTCTCA--CAGCTGGTCACACCAAAGTAGGCATCTTGGCCTCCCTCTCCCTGTCGTCTA-TACCAAGCTGCCCCTGGGCTCTGCCTGGT----------------------------------------------------CCCCCTGGGTCCTATACCTGT------CGCAAGAGAGGAGCG-------------GTTTCTAAAAGAAAGGCGTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1371333 162 + 3644372 AACAAGCTTCAGGTATTCACTTCTCA--CAGCCGGTCACACCAAAGTAGGCATCTTGGCCTCCCTCTCCCTGTCGTCTA-TACCAAGCTGCCCCTGGGCTCTGCCTGGT----------------------------------------------------CCCCCTGGGTCCTATACCTGT------CGCAAGAGAGGAGCG-------------GTTTCTAAAAGAAAGGCATG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1325418 162 - 10304083 AACAAGCTTCAGGTATTCACTTCTCA--CAGCTGGTCACACCAAAGTAGGCATCTTGGCCTCCCTCTCCCTGTCGTCTA-TACCAAGCTGCCCCTGGGCTCTGCCTGGT----------------------------------------------------CCCCCTGGGTCCTATACCTGT------CGCAAGAGAGGAGCG-------------GTTTCTAAAAGAAAGGCCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1396249 162 - 107702431 AACAAGCTTCAGGTATTCACTTCTCA--CAGCTGGTCACACCAAAGTAGGCATCTTGGCCTCCCTCTCCCTGTTGTCTA-TACCAAGCTGCCCCTGGGCTCTGCCTGGT----------------------------------------------------CCCCCTGGGTCCTATACCTGT------CGCAAGAGAGGAGTG-------------GTTTCTAAAAGAAAGGCATG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 874098 162 - 2200435 AACAAGCTTCAGGTATTCACTTCTCA--CAGCTGGTCACACCAAAGTAGGCATCTTGGCCTCCCTCTCCCTGTCGTCTA-TACCAAGCTGCCCCTGGGCTCTGCCTGGT----------------------------------------------------CCCCCTGGGTCCTATACCTGT------CGCAAGAGAGGAGCG-------------GTTTCTAAAAGAAAGGCCTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1312519 162 - 13651311 AACAAGCTTCAGGTATTCACTTCTCA--CAGCTGGTCACACCGAAGTAGGCATCTTGGCCTCCCTCTCCCTGTCGTCTA-TACCAAGCTGCCACTGGGCTCTGCCTGGT----------------------------------------------------CCACCTGGGTCCTAAACCTGT------TGCGAGAGAGGAGCG-------------GTTTCTAAAAGAAAGGCATG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1321843 162 - 108792865 AACAAGCTTCAGGTATTCACTTCTCA--CAGCTGGTCACACCAAAGTAAACATCTCAGCCTCCCTTTCCCTGTCATCCA-TACCAAGCTCCCACTGGGCTCTGGCTGCT----------------------------------------------------CCACCTGGGTCCTAAATCCAT------TGCAAGAGAGGAGCA-------------GTTTCTAAAAGAAAGGGGTG i calJac3.chr14 C 0 I 314 s saiBol1.JH378218 1174019 162 - 7082604 AACAAGCTTCAGGTATTTACTTCTCA--CAGCTGGTCACACCAAAGTAAGCATCTCAGCCTCCCTTTCCCTGTCATCTA-TACCAAGCTCCCACTGGGCTCTGGCTGCT----------------------------------------------------CCACCTGGGTCCTAAACGCAT------TGCAAGAGAGGAGCA-------------GTTTCTAAAAGAAAGGGGTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1266447 145 + 1864846 AACAAGCTTCAGG-------------------TGGTCACACCAAAGTAAGCATCTCAGCCTCCCTTTCCCTGTCATCTG-TACCAAGCTCCCACTGGGCTCTGGCTGCT----------------------------------------------------CCACCTGGGTCCTAAACCCAT------TGCAAGAGAGGAGCA-------------GTTTCTAAAAGAAAGGGGTG i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 904850 129 + 5252280 AG---ATGTCAGGCATTTGCAGCCCA--CTCCTAGTCTTGCCATAGGGAAAATTCT-GCTTCACTGTCCATGTC------CACC------TCCCTGGACTCTGGGTGGC----------------------------------------------------TCACCTGG--CCAATAT-TAT------CCCAAGAGAAGAGCA-------------GCACC--------------- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89952127 139 - 120129022 --------CCATGTACCAGCATCTCAGCTTCTTTGTCATTTCAAAGTGAATTCTCCTGTCCCCTTTCCTGGGTCACC----------CTCCCCTGGCACTCTGGTTGGT----------------------------------------------------T---CCGGATCCTGAGCAC----------CAGTACAGGAGCA-------------GTTTCTGAAAGGAATGGAC- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1604471 233 + 4416731 AAAAAGCTTCAGGTTTTCACTCCTCA--TAACTGGCCATACCATAGTAATTGTCGTGACCTCCCTCTCCCCACCATCAACTTCCAAGGAGCTCCAAGGCTTTCCCAAGTTAAATGCACAGCCCTAACTCAATCACTCTACATCCTGAGAGACCTTAGGGAACTCTCTGGGTTGTGTATTTGTCTTTCCTGCAAAGCTGGACCACGTGAAAACACACGTTCTAAATAGCAGGCCAC- i dasNov3.JH576208 I 395 C 0 a score=676469.000000 s hg38.chr2_KI270774v1_alt 48958 77 + 223625 CAGAGAGGACCAGGGAGAGGCCGAGGGGACTTCATGCTGTCAGGGAAGTTTGAAATCATTTTTGAGATGTCACGTCT s panTro5.chr2A 1325854 77 + 111504155 CAGAGAGGACCAGGGAGAGGCCGAGGGGACTTCATGCTGTCAGGGAAGTTTGAAATCATTTTTGAGATGTCACGTCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1286587 77 + 114371477 CAGAGAGGACCAGGGAGAGGCCGAGGGGACTTCATGCTGTCAGGGAAGTTTGAAATCATTTTTGAGATGTCACGTCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1311488 77 + 1464242 CAGAGAGGACCAGGGAGAGGCCGAGGGGACTTCATGCTGTCAGGGAAGTTTGAAGTCATTTTTGAGATGTCACGTCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1042614 77 + 81552678 CAGAGAGGACCAGGAAGAGGCCAAGGGGACTTCATGCTGTCAGGGAAGTTTGAAGTCATTTTTGAGATGTCACGTCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1370955 77 + 108979918 CAGAGAGGACCAGCAAGAGGCCGAGGGGACTTCATGCTGTCAGGGAAGCTCGAAGTCATTTTTGAGATGTCACGTCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1343139 77 - 111193037 CAGAGAGGACCAGCAAGAGGCCGAGGGGACTTCATGCTGTCAGGGAAGTTCGAAGTCATTTTTGAGATGTCACGTCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1371495 77 + 3644372 CAGAGAGGACCAGCAAGAGGCCGAGGGGACTTCATGCTGTCAGGGAAGTTCGAAGTCATTTTTGAGATGTCACGTCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1325580 76 - 10304083 CAGAGAGGACCAGCAAGAGGCCGAGGGGA-TTCATGCTCTCAGGGAAGTTCGAAGTCATTTTTGAGATGTCACGTCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1396411 77 - 107702431 CAGAGAGGACCAGCAAGAGGCCGAGGGGACTTCATGTTGTCAGGAAAGTTTGAAGTCATTTTTGAGATGTCACATCA i chlSab2.chr14 C 0 I 175 s manLeu1.NW_012103754v1 874260 76 - 2200435 CAGAGAGGACCAGCAAGAGGCCAAGGGGA-TTCATGCTCTCAGGGAAGTTCGAAGTCATTTTTGAGATGTCACATCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1312681 76 - 13651311 CAGAGAGGACCAGGAAGAGGCCGAGGGGACTTCATGCTGTCAGGGAAGTTTG-AGTCATTTTTGAGATGTCGCGTCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1322319 77 - 108792865 CAGAGAGGACCGGGGACAGACCGAAGGGACTTCATACTGTCAGGGAGGTCTGAAGTCAGTTTTGAGATGTCACGTCT i calJac3.chr14 I 314 C 0 s saiBol1.JH378218 1174181 77 - 7082604 CAGAGAGGCCCAGGGACAGACCAAGGGGACTTCATACTGTCAGGGAGGTCTGAAGTCAATTTTGAGATGTCACATCT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1266592 75 + 1864846 CAGAGAGGACCAGGGACAGACTAAGGGGACTTCATACTGTCA--GAGGTCGGAAGTCAATTTTGAGATGTCACGTCT i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 904979 76 + 5252280 CATAGGAGGCCACAGAGAGCTGAGGTGGGTTTCACAGAGTGAGGGAAGTTCACAG-CATTGCTGAAATGTCTAGTCC i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89952266 74 - 120129022 CAGAGACTAAGAGAGGAATGTGGGTGGGGCCTT---CTGTAAAGGAAGGTAGAAGCTAGTCTTGCAGTATGAGATCC i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1604704 56 + 4416731 CGGAGGGAATGAG-----------GTTGACTTCAAGTTGTAGAAGAATT----------TGTTAATATGTCAGATCC i dasNov3.JH576208 C 0 C 0 a score=1530278.000000 s hg38.chr2_KI270774v1_alt 49035 184 + 223625 TTGAGTTATAAAGAAAAGCAGCTCCGAAAAGCT---GAGATGGATGTTATTGGGGAGGGAGGGCTTTA--CCCGGTGATGTGTGACCTCCAATCCTGCCTGGG---GCCCCATTCCCCACCCCCTGATTCTGCCATGGAATGAAAATGACCA-AGA-TCCTGCCTTTCGAGA-G-CTTAAAGGAGCATG-TCTGTGG s panTro5.chr2A 1325931 184 + 111504155 TTGAGTTATAAAGAAAAGCAGCTCCGAAAAGCT---GAGATGGATGTTATTGGGGAGGGAGGGCTTTA--CCCGGTGATGTGTGACCTCCAATCCTGCCTGGG---GCCCCATTCTCCACCCCCTCATTCTGCCATGGAATGAAAATGACCA-AGA-TCCTGCCTTTCGAGA-G-CTTAAAGGAGCATG-TCTGTGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1286664 184 + 114371477 TTGAGTTATAAAGAAAAGCAGCTCCGAAAAGCT---GAGATGGATGTTATTGGGGAGGGAGGGCTTTA--CCCGGTGATGTGTGACCTCCAATCCTGCCTGGG---GCCCCATTCTCCACCCCCTCATTCTGCCATGGAATGAAAATGACCA-AGA-TCCTGCCTTTCGAGA-G-CTTAAAGGAGCATG-TCTGTGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1311565 184 + 1464242 GTGAGTTATAAAGAAAAGCGGCTCCGAAAAGCT---GAGATGGATGTTATTGGGGAGGGAGGGCTTTA--CCCGGTGATGTGTGACCTCCAGTCCCGCCTGGG---GCCCCATTCTCCACCCCCTCATTCTGCCATGGAATGAAAATGACCA-AGA-TCCTGCCTTTCGAGA-G-CTTAAAGGAGCATG-TCTGTGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1042691 183 + 81552678 TTGAGTTATAAAGAAAAGCGGCTCCGAAAAGCT---GAGATGGATGTTATTGGGGAGGGAGGGCTTTA--CACGGTGATGTGTGACCTCCAATCCTGCCTGGG---GCCCCATTCTCCACCCCCTCATTCTGCGATGGAATGAAAAT-ACCA-AGA-TCCTGCCTTTTGAGA-G-CTTAAGGGAGCATG-TCTGTGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1371032 184 + 108979918 TTGAGTTATAAAGAAAAGCAGTTCAGAAAAGCT---GAGATGGATATTACTGGGGAGGGAGGGCTTTA--CCCGGTGATGTGTGACCTCCACCCCTGCCTGGG---GCCCCATTCTCCACCCGCTCATTCTGCCATGGAATGAAAATGACCA-AGA-TCCTACCTTTTGAGA-G-CTTAAGGGAGCACC-TCTGTGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1343216 184 - 111193037 TTGAGTTATAAAGAAAAGCAGTTCAGAAAAGCT---GAGATGGATATTACTGGGGAGGGAGGGCTTTA--CCCGGTGATGTGTGACCTCCACCCCTGCCTGGG---GCCCCATTCTCCACCCGCTCATTCTGCCATGGAATGAAAATGACCA-AGA-TCCTGCCTTTTGAGA-G-CTTAAGGGAGCACC-TCTGTGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1371572 184 + 3644372 TTGAGTTATAAAGAAAAGCAGTTCAGAAAAGCT---GAGATGGATATTACTAGGGAGGGAGGGCTTTA--CCCGGTGATGTGTGACCTCCACCCCTGCCTGGG---GCCCCATTCTCCACCCGCTCATTCTGCCATGGAATGAAAATGACCG-AGA-TCCTGCCTTTTGAGA-G-CTTAAGGGAGCACC-TCTGTGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1325656 184 - 10304083 TTGAGTTATAAAGAAAAGCAGTTCAGAAAAGCT---GAGATGGATATTACTGGGGAGGGAGGGCTTTA--CCCGGTGATGTGTGACCTCCACCCCTGCCTGGG---GCCCCATTCTCCACCCGCTCATTCTGCCATGGAATGAAAATGACCG-AGA-TCCTGCCTTTTGAGA-G-CTTAAGGGAGCACC-TCTGTGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1396663 183 - 107702431 TTGAGTTATAAAGAAAAGCAGTTCAGAAAAGCT---GAGATGGATATTACTGGGGAGGGAGGGCTTTA--CCCGGTGATGCGCGACCTCCACCCCTGCCTGGG---GCCCCATTCTCCA-CCGCTCATTCTGCCATGGAATGAAAATGACCG-AGA-TCCTGCCTTTTGAGA-G-CTTAAAGGAGCACC-TCTGTGG i chlSab2.chr14 I 175 C 0 s manLeu1.NW_012103754v1 874336 184 - 2200435 TTGAGTTATAAAGAAAAGCAGTTCAGAAAAGCT---GAGATGGATATTACTGGGGAGGGAGGGCTTTA--CCCGGTGATGTGCGACCTCCACCCCTGCCTGGG---GCCCCATTCTCCACCCACTCATTGTGCCATGGAATGAAAATAACCG-AGA-TCCTGCCTTTTGAGA-G-CTTAAGGGAGCACC-TCTGTGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1312757 184 - 13651311 TTGAGTTATAAAGAGAAGCAGTTCAGAAAAGCT---GAGATGGATATTACTGGGGAGGGAGGGCTTTA--CCCGGTGATGTGCGACCTTCACCCCTGCCTGGG---GCCCCATTCTCCACCCGCTCATTCTGCCATGGAATGAAAATGACTG-AGA-TCCTGCCTTTTGAGA-G-CTTAAAGGAGCACC-TCTGTGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1322396 183 - 108792865 TTGGGTTAT-AAAAAAAGTGGCTCAGAAAAGCT---AAGATGGGTGTTGCTGGGGAGGGAGGGCTTCA--CCTGGTGATGTACGGCCTCCACTCCTGCCTGGG---GCGCAGTTCTCCACCCCCTCA-TCAGCCATGGAATGAAAAC--CCA-AGATTCCTGCCTTTCCACATG-CTTAAAGGAGCATGACCTGTGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1174258 182 - 7082604 TTGGGTTAT-TAAAAAATCGGCTCACAAAAGCT---AATATGGGTGTTGCTGAGGAGGGAGGGCTTCA--CCTGGTGATGTACGGCCTCCACTCCCGCCTGGG---GCGGGGTTCTCCACCCCCTCA-TCTGCCATGGAATGAAAAC--CCA-AGA-TCCTGCCTTTCCAGATG-CTTAAAGGAGCATGGCCTGTGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1266667 184 + 1864846 TTGGGTTATAAAAAAAAGCGGCTCAGAAAAGCT---AAGATGGGTGTTACTGGGGAGGGAGGGCTTCA--CCTCGTGATGTACGGCCCATACTCCTGCCTGGG---GCGGGGTTCTCCACCCCCTCA-TCTGCCATGTAATGAAAAC--CCA-AGATTCCTGCCTTTCCAGATG-CTTAAAGGAGCATGGCCTGTGG i cebCap1.NW_016107827v1 C 0 I 5 s otoGar3.GL873658 905055 158 + 5252280 TTGGGTGATGAAGAGAAGCAGCTCAGAAAAACT---GAGATGGA----------GGGCAGGGGCTTTA--CCTGGGGAAATGC--TCCTCATCCCTGCC-------------TTCTCCATCC-CTCATCCCGTCC---AGTGAAATTATCAG-AGA-TCCCACCTTTACAGGTG-CTCAGAGGAGCAGG-CCT-TGG i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89952340 129 - 120129022 TTCTCTTAGGAAGAGAAGCACCTTAGTTAAA------------ACATCAGAGGTCCAGGAGAGCTTCGGCACCTGTGATGAGCTGCCATCTCTCCTGTAGG------------------------------------------------CAG-GTG-TGCTGACTTCCC----A-TCCCAAGGACTACA-ACTGGGG i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1604760 173 + 4416731 TTGGTTCACGAAGAGAATCATCTCGGAATAGCCAGAAGAATGAGT-------GGGAAGGAGTTCTTTA--CTT------------CCCTCAGGCCCAATGGAGTGTTTACCTTTCTCCATCCCATTGTCCTGCCACAGAATAAAAAATATCACAGA-TTTTGACTTTAGAGA-GTCTGAAAGGAACACA-TATATAG i dasNov3.JH576208 C 0 C 0 a score=57729.000000 s hg38.chr2_KI270774v1_alt 49219 9 + 223625 AACTGACAG s panTro5.chr2A 1326115 9 + 111504155 AACTGACAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1286848 9 + 114371477 AACTGACAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1311749 9 + 1464242 AACTGACAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1042874 9 + 81552678 AACTGACAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1371216 9 + 108979918 GACTGACGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1343400 9 - 111193037 GACTGACGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1371756 9 + 3644372 GACTGACGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1325840 9 - 10304083 GACTGACGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1396846 9 - 107702431 GACTGACGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 874520 9 - 2200435 GACTGACGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1312941 9 - 13651311 GACTGACAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1322579 4 - 108792865 -----CCGG i calJac3.chr14 C 0 I 5 s saiBol1.JH378218 1174440 4 - 7082604 -----TCGG i saiBol1.JH378218 C 0 I 5 s otoGar3.GL873658 905213 9 + 5252280 GCCTGACCG i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89952469 9 - 120129022 GATGGACAA i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1604933 9 + 4416731 AATAGACAA i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1266851 5 + 1864846 I a score=1330713.000000 s hg38.chr2_KI270774v1_alt 49228 135 + 223625 GCCTTAG------TTGCTCTTCTTCTTGAAAATGATTTATCTTTCTTTCTGGTGTCATCTCAGCAGTTTAGAATATGCTAGAATTTTGGTGAGATTTAGCAAATAGGATGTCAATCAATTAGCAGTCACCTCA-AAAGAAat s panTro5.chr2A 1326124 137 + 111504155 GCCTTAG----CGTTGCTGTTCTTCTTGAAAATGATTTATCTTTCTTTCTGGTGTCATCTCAGCAGTTTAGAATATGCTAGAATTGTGGTGAGATTTAGCAAATAGGATGTCAATCAATTAGCAGTCACCTTA-AAAGAAAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1286857 137 + 114371477 GCCTTAG----CGTTGCTGTTCTTCTTGAAAATGATTTATCTTTCTTTCTGGTGTCATCTCAGCAGTTTAGAATATGCTAGAATTGTGGTGAGATTTAGCAAATAGGACGTCAATCAATTAGCAGTCACCTTA-AAAGAAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1311758 133 + 1464242 GCCTTAG----CGTTGCTGTTCTTCTTGAAAATGATTTATCTTTCTTTCTGGTGTCATCTCAGCAGTTTAGAATATGCTAGAATTGTG----GATTTAGCAAATAGGATGTCAATCAATTAGCAGTCACCTTA-AGAGAAAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1042883 133 + 81552678 GCCTTAG----CGTTGCTGTTCTTCTTGAAAGTGATTTATCTTTCTTTCTGGTGTCATCTCAGCAGTTTAGAATATGCTAGAATTTTGGCGAGATTTAGCAAATAGGATG----TCAATTAACAGTCACCTTA-AAAGAAAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1371225 138 + 108979918 ACCTTAGTTTGTGTTGCTG---TTCTTGAAAATGATTTCCCTTTCTTTCTGGTGTCATCTAGGCAGTTTAGAATATGCTAGAATTTTGGTGAGATTTAGCAAATAGGATGTCAATCAATTAGCAGTCACCTTA-AAAGAAAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1343409 138 - 111193037 ACCTTAGTTTGTGTTGCTG---TTCTTGAAAATGATTTCCCTTTCTTTCTGGTGTCATCTAGGCAGTTTAGAATATGCTAGAATTTTGGTGAGATTTAGCAAATAGGATGTCAATCAATTAGCAGTCACCTTA-AAAGAAAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1371765 138 + 3644372 ACCTTAGTTTGTGTTGCTG---TTCTTGAAAATGATTTCTCTTTCTTTCTGGTGTCATCTAGGCAGTTTAGAATATGCTAGAATTTTGGTGAGATTTAGCAAATAGGATGTCAATCAATTAGCAGTCACCTTA-AAAGAAAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1325849 138 - 10304083 ACCTTAGTTTGTGTTGCTG---TTCTTGAAAATGATTTCTCTTTCTTTCTGGTGTCATCTAGGCAGTTTAGAATATGCTAGAATTTTGGTGAGATTTAGCAAATAGGATGTCAATCAATTAGCAGTCACCTTA-AAAGAAAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1396855 141 - 107702431 ACCTTAGTTTGTGTTGCTGTTCTTCTTGAAAATGATTTCTCTTTCTTTCTGGTGTCATCTCGGCAGTTTAGAATATGCTAGAATTTTGGTGAGATTTAGCAAATAGGATGTCAATCAATTAGCAGTCACCTTA-AAAGAAAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 874529 138 - 2200435 ACCTTAGTTTGTGTTGCTG---TTCTTGAAAATGATTTCTCTTTCTTTCTGGTGTCATCTAGGCAGTTTAGAATATGCTAGAATTTTGGTGAGATTTAGCAAATAGGATGTCAATCCATTAGCAGTCACCTTA-AAAGAAAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1312950 141 - 13651311 ACCTTAGTTTGTGTTGCTGTTCTTCTTGAAAATGATTTATCTTTCTCTCTGGTGTCATCTCAGCAGTTTAGAATATGCTAGAATTTTGGTGAGATTTAGCAAATAGGATGTCAATCAATTACCAGTCACCTTA-AAAGAAAT i colAng1.NW_012118821v1 C 0 I 764 s calJac3.chr14 1322588 131 - 108792865 ----------GCCTTGCTGTTCTTCTAGAAAATGATTTATCTTTCTTTCTGGTGTCATCTCAGCAGTTTAGAATATGCTAGAATTTTGGTGAGGTTTAGCAAATAGGATGTCAATCAATTAACAGTCATCTTT-AAAAAATT i calJac3.chr14 I 5 C 0 s saiBol1.JH378218 1174449 132 - 7082604 ----------GCATTGCTGTTCTTCCTGAAAATGATTTATCTTTCTTTCTGGTGTTATCTCAGCAGTTTAGAATATGCTAGAATTTTGGTGAGATTTAGCAAATAGGATGTCAATCAATTAACAGTCATCTTGAAAAAAACT i saiBol1.JH378218 I 5 C 0 s cebCap1.NW_016107827v1 1266856 131 + 1864846 ------GTTTGCGTTGCTGTTCTTCCTGAAAATGATTTA----TCTTTCTGGTGTCATCTCAGCAGTTTAGAATATGCTAGAATTTTGGTGAGATTTAGCAAGTAGGATGTCAATCAATTAACAATCATCTTA-AAAAGATT i cebCap1.NW_016107827v1 I 5 C 0 s otoGar3.GL873658 905222 116 + 5252280 ---------------GCAGGGTCTTCTG---------TCTCCTTTTTTCTGATGTCATGTCAGCAGTTTAGGACATGCTGGAATTCTGAGGAAATATGGTAAATA-CATGTCAATCAATCAGAAGGCACCTTA-AAAGGAAT i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89952478 129 - 120129022 ---GCAG--------GCTG-TCCTCCTGAAAAGGATGAAGTTTTCTCTGTGGTCTTGTCTCAGCAATTTAGAATGTGATAGAATTTGGCTCAGATTTAATAAATAGGAAGTCAATGACTGAACAGTCGCCTTA-AAAGGAAT i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1604942 132 + 4416731 ---------GTCAGAGTCTTTTTTCTTGAAGTTTATATAGCTTTCTTTTTGAAGTCATCTCAAGGGTATAGAATATGCTAGAATTTCTATGATATGTGGTTACTAGGATGTCAGTCAATAAGCAGTCACCTTA-AAAAAAAA i dasNov3.JH576208 C 0 C 0 a score=695723.000000 s hg38.chr2_KI270774v1_alt 49363 100 + 223625 tttatt---ttcttcattttatt-gaatt-ttgttATGC--AAACA-----AAGAAGAAAGACA--ACATTAGAAGAATGCA-CTTAGACCTTCTTTTCTACCGATAGAAT-------GGGG- s panTro5.chr2A 1326261 100 + 111504155 TTTGTT---TTCTTCATTTTATT-GAATT-TTGTTATGC--AAACA-----AAGAAGAGAGACA--ACATTAGAAGAATGCA-CTTAGACCTTCTTTTCTACCGATAGAAT-------GGGG- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1286994 100 + 114371477 TTTGTT---TTCTTCATTTTATT-GAATT-TTGTTATGC--AAACA-----AAGAAGAGAGACA--ACATTAGAAGAATGCA-CTTAGACCTTCTTTTCTACCGATAGAAT-------GGGG- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1311891 97 + 1464242 TTTGTT---TGCTTCATTTTATT-GAATT-TTGTTATGC--AAAC--------GAAGAGAGACA--GCATTAGAAGAATGCA-CTTGGACCTTCTTCTCTACCGGTAGAAT-------GGGG- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1043016 100 + 81552678 TTTGTT---TTCTTCATTGTATT-GAATT-TTGTTATGC--GAACA-----AAGAAGAGAGACA--ATATTAGAAGAATGCA-CTTAGACCTTCTTTTCTACCGACAGAAT-------GGGG- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1371363 100 + 108979918 TTTGTT--GTTCTTCATCTTATT-GAATT-TTGTTATGT--GAACA-----AAGAAGAGAGACA--ACATTAGAAGAATGCA-CTTAGACCTTCTTTTCTACCGATGGAAT--------GGG- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1343547 100 - 111193037 TTTGTT--GTTCTTCATCTTATT-GAATT-TTGTTATGT--GAACA-----AAGAAGAGAGACA--ACATTAGAAGAATGCA-CTTAGACCTTCTTTTCTACCGATGGAAT--------GGG- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1371903 100 + 3644372 TTTGTT--GTTCTTCATCTTATT-GAATT-TTGTTATGT--GAACA-----AAGAAGAGAGACA--ACATTAGAAGAATGCA-CTTAGACCTTCTTTTCTACCGATGGAAT--------GGG- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1325987 100 - 10304083 TTTGTT--GTTCTTCATCTTATT-GAATT-TTGTTATGT--GAACA-----AAGAAGAGAGACA--ACATTAGAAGAATGCA-CTTAGACCTTCTTTTCTACCGATGGAAT--------GGG- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1396996 100 - 107702431 TTTGTT--GTTCTCCATCTTATT-GAATT-TTGTTATGC--GAACA-----AAGAAGAGAGACA--ACATTAGAAGAATGCA-CTTAGACCTTCTTTTCTACCAATAGAAT--------GGG- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 874667 100 - 2200435 TTTGTT--GTTCTTCATCTTATT-GAATT-TTGTTATGT--GAACA-----AAGAAGAGAGACA--ACATTAGAAGAATGCA-CTTAGACCTTCTTTTCTACCGATGGAAT--------GGG- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1322719 98 - 108792865 -TTGTT--GCTCTTCCTTTTATT-GAATT-TTCTTATGC--CAACA-----AAGAAGAGAGACA--ACCTCAGAAG-ATGCA-CTTAGAGCTTCCTTTCTGCCAACACAAC--------AGG- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1174581 98 - 7082604 -TTGCA--GTTCTTCCTTCTATT-GAATT-TTGTTATGC--CAACA-----AAGAAGAGAGACA--ACCTTAGAAG-ATGCA-CTTAGAGCTTCCTTTCAACCAACACAAC--------AGG- i saiBol1.JH378218 C 0 M 739 s cebCap1.NW_016107827v1 1266987 98 + 1864846 -TTGTT--GTTCTTCCTTTTACT-GAATT-TTGCTATGC--CAACA-----AAGAAGAGAGACA--ACCGTAAAAG-ATGAA-CTTAGAGCTTCCTTTCTACCAACACAAC--------AGG- i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 905338 99 + 5252280 -TTGTC--CTTGTTCACTATATTGGAATT-TCATTGTAC--CAACA-----AAGCAGAGAATCAGGGCGTGAGAAGAAAGCG-TTAAAGC---CCTTCCCACCTGTCCAGT--------GGA- i otoGar3.GL873658 C 0 I 1 s mm10.chr12 89952607 114 - 120129022 TATACT--ATTCTTTGCCGTCTTAGAACA-TCACCATATTGGAACAGCATCGAGTAGAAAGGGA--TCATCAGTG--ATGTA-CTGAAATCACCCTTTCTGCCTGTTGAGCTGTCTgttggg- i mm10.chr12 C 0 I 11 s dasNov3.JH576208 1605074 103 + 4416731 -TTGCTTTGTTCTTCATTACATT-GGACTATTGCTATAC--AAGCA-----TAGAA-AGAAACA--AAATCAAAGTAATAGACCCCAAAGTTCCTTCTCCCTCTGTAAAGT--------GGAA i dasNov3.JH576208 C 0 C 0 e colAng1.NW_012118821v1 1313091 764 - 13651311 I a score=569185.000000 s hg38.chr2_KI270774v1_alt 49463 83 + 223625 GTGGCAGGAC-GGC-AAGATTCGTATTTTACCA-TCAAAAACAGGAAGATGA-TTTTTCCCCAGTAACTGAATAACTTCTAAAAACA s panTro5.chr2A 1326361 83 + 111504155 GTGGCAGGAC-GGC-AAGATTCATATTTTACCA-TCAAAAACAGGAAGATGA-TTTTTCCCCAGTAACTGAATAACTTCTAAAAACA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1287094 83 + 114371477 GTGGCAGGAC-GGC-AAGATTCGTATTTTACCA-TCAAAAACAGGAAGATGA-TTTTTCCCCAGTAACTGAATAACTTCTAAAAACA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1311988 83 + 1464242 GTGGCAGGGC-GGC-AAGATTCGTGTTTTACCA-TCAAAAACAGGAAGATGA-TTTTTCCCCAGTAACTGAATAACTTCTAATAACA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1043116 83 + 81552678 GTGGCAGGAC-GGC-AAGATTCGTATTTTACCA-TCGAAAACAGGAAGATGA-TTTTTCCCCAGTAACTGAATAACTTCTAAAAACA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1371463 84 + 108979918 GTGGCGGGAC-GGC-GAGATTCATATTTTACCA-TCAAAAACAGGAAGATGATTTTTTCCCCAGTAACTGAATAACTTCTAAAAACA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1343647 84 - 111193037 GTGGCGGGAC-GGC-GAGATTCATATTTTACCA-TCAAAAACAGGAAGATGATTTTTTCCCCAGTAACTGAATAACTTCTAAAAACA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1372003 84 + 3644372 GTGGCGGGAC-GGC-GAGATTCATATTTTACCA-TCAAAAACAGGAAGATGATTTTTTCCCCAGTAACTGAATAACTTCTAAAAACA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1326087 84 - 10304083 GTGGCGGGAC-GGC-GAGATTCATATTTTACCA-TCAAAAACAGGAAGATGATTTTTTCCCCAGTAACTGAATAACTTCTAAAAACA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1397096 84 - 107702431 GTGGTGGGAT-GAC-AAGATTTGTGTTTTACCA-TCAAAAACAGGAAGATGATTTTTTCCCCAGTAACTGAGTAACTTCTAAAAACA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 874767 83 - 2200435 GTGGCGGGAC-GGC-GAGATTCATATTTTACCA-TCAAAAACAGGAAGATGA-TTTTTCCCCAGTAACTGAATAACTTCTAAAAACA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1322817 83 - 108792865 GTGGCAGGAC-GGTGGAGGTTCACATTTTACCT-TCAGAAGCAGGAACATGA--CTTTCCCCAGTCACCGAATAACTTCTAAAAACA i calJac3.chr14 C 0 I 303 s cebCap1.NW_016107827v1 1267085 83 + 1864846 GTGGCAGGAT-GGTGGAGGTTCACATTTTACCT-TCAGAAGCAGGAACATGA--CTTTCCCCAGCCACCGAATAACTTCTAAAAACA i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 905438 81 + 5252280 -CAGCAGGAG-GGTGGGGAGTCAGA-TTTACCA-TCCAAAACGTTAAGACTA--TTTTTCACAATAACTGAAAAAATTCTAGAAGCA i otoGar3.GL873658 I 1 C 0 s mm10.chr12 89952732 75 - 120129022 gctgcgggttgggc-tgGATTTGTAT--------CCCAAGACACTGAGATTG--CTTTTCTCTACAACAGCATGACGTTTGAAGAC- i mm10.chr12 I 11 C 0 s dasNov3.JH576208 1605177 81 + 4416731 -TGGCAGAAT-AGGGAAAGTTTAGATTTCACaatttaaaaatattaaaatat----CTTCCCAATAACAATGTAACTTTTAAAAACT i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1174679 739 - 7082604 M e colAng1.NW_012118821v1 1313091 764 - 13651311 I a score=45308.000000 s hg38.chr2_KI270774v1_alt 49546 7 + 223625 GTTTCTT s panTro5.chr2A 1326444 7 + 111504155 GTTTCTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1287177 7 + 114371477 GTTTCTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1312071 7 + 1464242 GTTTCTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1043199 7 + 81552678 GTTTCTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1371547 7 + 108979918 GTTTCTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1343731 7 - 111193037 GTTTCTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1372087 7 + 3644372 GTTTCTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1326171 7 - 10304083 GTTTCTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1397180 7 - 107702431 GTTTCTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 874850 7 - 2200435 GTTTCTT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1323203 7 - 108792865 gTTTCTT i calJac3.chr14 I 303 C 0 s cebCap1.NW_016107827v1 1267168 7 + 1864846 GTTTCTT i cebCap1.NW_016107827v1 C 0 I 321 s otoGar3.GL873658 905519 4 + 5252280 GCTT--- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89952807 2 - 120129022 --TT--- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1605258 7 + 4416731 TTTTGTT i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1174679 739 - 7082604 M e colAng1.NW_012118821v1 1313091 764 - 13651311 I a score=547232.000000 s hg38.chr2_KI270774v1_alt 49553 71 + 223625 TAACTTCTGTGTCAGCTTTGGGGTTCACTGTGGAC-TTTT---CTGTTGATTTGACACAGGGACTTTATGTGGGG s panTro5.chr2A 1326451 71 + 111504155 TAACTTCTGTGTCAGCTTTGGGGTTCACTGTGGAC-TTTT---CTGTTGATTTGACACGGGGACTTTATGTGGGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1287184 71 + 114371477 TAACTTCTGTGTCAGCTTTGGGGTTCACTGTGGAC-TTTT---CTGTTGATTTGACACGGGGACTTTATGTGGGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1312078 71 + 1464242 TAACTTCTGTGTCAGCTTTGGGGTTCACTGCAGAC-TTTT---CTGTTGATTTGACACGGGGACTTTATGTGGGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1043206 71 + 81552678 TAACTTCTGTGTCAGCTTTGGGGTTCACTGTGGAC-TTTT---CTGTTGATTTAACACGGGGACTTTTTGTGGAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1371554 71 + 108979918 TAACTTCTGTGTCAGCTTTGGGGTTCAGCGTGGAC-TTTT---CTGTTGATTTGACACGAGGACTTTATGTGGGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1343738 71 - 111193037 TAACTTCTGTGTCAGCTTTGGGGTTCAGCGTGGAC-TTTT---CTGTTGATTTGACACGAGGACTTTATGTGGGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1372094 71 + 3644372 TAACTTCTGTGTCAGCTTTGGGGTTCAGCATGGAC-TTTT---CTGTTTAGTTGACACGAGGACGTTATGTGGGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1326178 71 - 10304083 TAACTTCTGTGTCAGCTTTGGGGTTCAGCGTGGAC-TTTT---CTGTTGAGTTGACACGAGGACTTTATGTGGGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1397187 71 - 107702431 TAACTTCTGTGTCGGCTTCGGGGCTCACCGGGGAC-TTTT---CTGTTGATTTGACACAAGGACTCTATGTGGGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 874857 71 - 2200435 TAACTTCTGTGTCAGCTTTGGGGTTCAGCCTGGAC-TTTT---CTGTTGATTTGACACGAGGACTTTATGTGGGG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1323210 71 - 108792865 TAACTTCGATGTCAGCTTTGGGGTTCACCGTGGAC-TTTT---TTGTTGATTTGACATGGAGACTTTATGTGAGG i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1267496 72 + 1864846 TAACTTCGATGTCAGCTTTGGGATTAAGTGTGGACTTTTT---TTGTTGATTTGACTTGGAGACTTTACGTGAGG i cebCap1.NW_016107827v1 I 321 C 0 s otoGar3.GL873658 905523 70 + 5252280 -AACTTCTATTTCAGCTTTGGGGTTCACTGTTGAG-TTAC---CTGTTGATTTGGCCTGGGGATGTTCTATGCTA i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89952809 68 - 120129022 CACCTTGTATATAGCCTTGCAGGCTCATTGCCAAT-TT------TGTTGGTTGGGGCTGGGAACTTTGTATGGGA i mm10.chr12 C 0 I 215 s dasNov3.JH576208 1605265 73 + 4416731 TAACCTCTATTTCAGGTTTGAGACTCATTGTTGAC-TTTTTTGTTGTTGATTTGACATGGAGACTTT-TGTGGGG i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1174679 739 - 7082604 M e colAng1.NW_012118821v1 1313091 764 - 13651311 I a score=405991.000000 s hg38.chr2_KI270774v1_alt 49624 56 + 223625 CAGTTTGTGGAGAGAAGATGAACCT---TTTGTGGGTCATTTTTGCTTTTACAGGACAT s panTro5.chr2A 1326522 56 + 111504155 CAGTTTGTGTAGAGAAGATGAACCT---TTTGTGGGTCATTTTTGCTTTTACAGGACAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1287255 56 + 114371477 CAGTTTGTGGAGAGAAGATGAACCT---TTTGTGGGTCATTTTTGCTTTTACAGGACAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1312149 56 + 1464242 CAGTTTGTGGAGAGAAGATGAACCT---TTTGTGGGTCATTTTTGCTTTTACAGGACAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1043277 56 + 81552678 CAGTTTGTGGAGAGAAGATGAATCT---TTTGTGGGTCATTTTTGCTTTTACAGGACAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1371625 56 + 108979918 CAGTTTGTGGAGAGAGGAGGAATCT---TTTCTGGGTCATTTTTGCTTTTACATGACAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1343809 56 - 111193037 CAGTTTGTGGAGAGAGGAGGAATCT---TTTCTGGGTCATTTTTGCTTTTACATGACAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1372165 56 + 3644372 CAGTTTGTGGAGAGAGGAGGAAGCT---TTTCTGGGTCATTTTTGCTTTTACATGACAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1326249 56 - 10304083 CAGTTTGTGGAGAGAAGAGGAATCT---TTTTTGGGTCATTTTTGCTTTTACATGACAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1397258 56 - 107702431 CAGTTTGTGGAGAGAAGAGGAATCT---TTTTTGGGTCATTTTTGCTTTTACATGACAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 874928 56 - 2200435 CAGTTTGTGGAGAGAAGAGGAATCT---TTTTTGGGTCATTTTTGCTTTTACATGACAT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1323281 56 - 108792865 AAGTTTGTGGAGAGAAAATGAATCT---TTTGTGGGTCGTTTTTGCTGTTACGTAACAC i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1267568 56 + 1864846 AAGTTTGTGGGGAGAAAATGAATCT---TTTGTGTGTCATTTTTGCTTTTAAGTAACAT i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 905593 49 + 5252280 -AGTTTGTGG---GAAGAAGAACAC---TTTGTTGGTCACTTTTGCTTTTA---GACAT i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1605338 59 + 4416731 GAGTTTGTGGAAAAAGGAATGATATCAGTCTGTGGCTCATTTTTTCTCTTAAATAGCAT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89952877 215 - 120129022 I e saiBol1.JH378218 1174679 739 - 7082604 M e colAng1.NW_012118821v1 1313091 764 - 13651311 I a score=367980.000000 s hg38.chr2_KI270774v1_alt 49680 79 + 223625 TTAGTGTCTG-------TAACATGCGGAGGTAAGGATCCAGGAGTTTGTTTCAG--------------TTTTTTTATTGGGAG-----------------------------------------------GGGGTAGGGGTATAACC s panTro5.chr2A 1326578 79 + 111504155 TTAGTGTCTG-------TAACATGCGGAGGTAAGGATCCAGGAGTTTGTTTCAG--------------TTTCTTTATTGGGAG-----------------------------------------------GGGGTAGGGGTATAACC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1287311 79 + 114371477 TTAGTGTCTG-------TAACATGCGGAGGTAAGGATCCAGGAGTTTGTTTCAG--------------TTTCTTTATTGGGAG-----------------------------------------------GGGGTAGGGGTATAACC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1312205 83 + 1464242 TTAGTGTCTG-------TAACATGCGGAGGTAAGGATCCAGGAGTTTGTTTCAG--------------TTTTTTTATTGGGGGGTG-------------------------------------------AGGGGTAGGGGTATAACC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1043333 79 + 81552678 GTAGGGTCTG-------TAATATGCGGAGGTAAGGATCCAGGAGTTTGTTTCAG--------------TTTTTTTATTGGAGG-----------------------------------------------GAGGTAGGGGCATAACC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1371681 86 + 108979918 TTGGTGTGTT-------TAACGTGCAGAGGTGAGGATCCAGCAGTTTGTTTTAG--------------TTTTTTTATTGGGTATGGG----------------------------------------GCGGGGAAACGGGCATAACC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1343865 86 - 111193037 TTGGTGTGTT-------TAACGTGCAGAGGTGAGGATCCAGCAGTTTGTTTTAG--------------TTTTTTTATTGGGTATGGG----------------------------------------GCGGGGAAACGGGCATAACC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1372221 86 + 3644372 TTGGTGTGTT-------TAACGTGCAGAGGTGAGGATCCAGCAGTTTGTTTTAG--------------GTTTTTTATTGGGTATGGG----------------------------------------GCGGGGAAACGGGCATAACC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1326305 86 - 10304083 TTGGTGTGTT-------TAACACGCAGAGGTGAGGATCCAGCAGTTCGTTTTAG--------------TTTTTTTATTGGGTATGGG----------------------------------------GCGGGGAAACGGGCATAACC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1397314 86 - 107702431 TTGGTGTGTT-------TAACATGCAGAGGTGAGGATCCAGCAGTTTGTTTTAG--------------TTTTTTTATTGGGTACGGG----------------------------------------GCAGGGAAACGGGCATAACC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 874984 86 - 2200435 TTGGTGTGTT-------TAACGTGCAGAGGTGAGGATCCAGCAGTTTGTTTTAG--------------TTTTTGTATTGGGTATGGG----------------------------------------GCAGGGAAGTGGGCATAACC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1323337 79 - 108792865 TTGTTTTCTG-------TAACATGAGGCTGGAAGGACCCAAGAGTTTGTTTTAC--------------TTATTTTTATTGGTG-----------------------------------------------GGGGGAGGGGCATACCC i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1267624 79 + 1864846 TTGGTTTCTG-------TAACATGAGGAAGTAAGGATCCAGGAGTTTGTTTTAA--------------TTATTTTTATTGGTG-----------------------------------------------AGCGGAGGGGAATAACC i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 905642 97 + 5252280 TTGGGGTCTT-------TAAAATGAGGAAGTAAGGA-CCAGGAGTTTACTTTAGGTATATTTTTCCTTTTTATTTATTTATTTTTCC----------------------------------------TCTAGTGA--GGACACCACC i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89953092 83 - 120129022 TTAGTCTCTGAGAGCTTTAAGGTGGAAAAGTAAGGACCTAGGAATTTAAGGTAT--------------TTTTTTACCTTAA-------------------------------------------------ATTTAAAGAGCCCACC- i mm10.chr12 I 215 C 0 s dasNov3.JH576208 1605397 124 + 4416731 TTGGCCTCTT-------TAA-ATGGGGAAGTAAGGGTCCAGGAATTTATTTTCA--------------GTATTTccttctttcctcccttcctccctccctccctccctcctccttcctttcctccttccTGGTGGGGGGAACAAC- i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1174679 739 - 7082604 M e colAng1.NW_012118821v1 1313091 764 - 13651311 I a score=448110.000000 s hg38.chr2_KI270774v1_alt 49759 58 + 223625 GTCTCTCTAGGAAA--CTC--TCCCTGGGGCACCCTTTCCTGC-TCTCCCG-TAGCCATGGGGA s panTro5.chr2A 1326657 58 + 111504155 GTCTCTCTAGGAAA--CTC--TCCCTGGGGCACCCTTTCCTGC-TCTCCCG-TAGCCATGGGGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1287390 58 + 114371477 GTCTCTCTAGGAAA--CTC--TCCCTGGGGCACCCTTTCCTGC-TCTCCCG-TAGCCATGGGGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1312288 58 + 1464242 GTCTCTCTAAGAAA--CTC--TCCCTGGGGCACCCTTTCCTGC-TCTCCTG-TAGCCATGGGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1043412 58 + 81552678 ATCTCTCTAGGAAA--CTC--TCCCTGGGGCACCCTTTCCTGC-CCTCCTG-TAGCCATGGGGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1371767 58 + 108979918 GTCTCTCTGGGAAA--CTC--TCCCTGGGGCACCCTTGCCTGC-TCTCCCG-AAGCCATGGGGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1343951 58 - 111193037 GTCTCTCTGGGAAA--CTC--TCCCTGGGGCACCCTTGCCTGC-TCTCCCG-AAGCCATGGGGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1372307 58 + 3644372 GTCTCTCTGGGAAA--CTC--TCCCTGGGGCACCCTTGCTTGC-TTTCCCG-AAGCCATGGGGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1326391 58 - 10304083 GTCTCTCTAGGAAT--CTC--TCCCTGGGGCACCCTTGCCTGC-TGTCCCG-TAGCCATGGGGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1397400 58 - 107702431 ATCTCTCTGGGAAA--CTC--TCCCTGGGGCACCCTTGCCTGC-TCTCCCG-TAGCCGTGGGGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 875070 58 - 2200435 GTCTCTCTAGGAAT--CTC--TCCCTGGGGCACCCTTGCCTGC-TCTCCCG-TAGCCATGGGGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1313855 58 - 13651311 GTCTCTCTAGGAAA--TTC--TCCGTGGGGCACCCTTGCCTGC-TCTCCGG-TAGCCATGGGGA i colAng1.NW_012118821v1 I 764 C 0 s calJac3.chr14 1323416 59 - 108792865 CT-TTCCGAGGAAACTCTC--TCCCTGGGGCCCCCTTTCCAGC-TCTCCCG-TAGCCGTGGGAA i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1267703 60 + 1864846 ATCTTCCCGGGAAACTCTC--TCCCTGGGGCACCCTTTCCTGT-TCTCCCA-TAACCCTGGGAA i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 905739 61 + 5252280 ATCTCTCAGGCAAA--CTCAGGCCCTGGAGCATTCTCTTTCGCGTCCCATG-TTGCCATGGTAA i otoGar3.GL873658 C 0 M 105 s mm10.chr12 89953175 55 - 120129022 ATCTTCAAAAGAAT--CTG--TTATT-GAGCATCATTTCTTCC-TTT--TG-TTGACATGACAA i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1605521 59 + 4416731 ATCTCTTAAAGAAA--TTAGGCCCCTAGAGCATCATTTATT---TCCCCTGTTGGCCATGGTGA i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1174679 739 - 7082604 M a score=332023.000000 s hg38.chr2_KI270774v1_alt 49817 43 + 223625 CAGGGTGGG---TGAA---CAAGGCCCCTCCTCGCTTCCCGCCGTGCTG s panTro5.chr2A 1326715 43 + 111504155 CAGGGTGGG---TGAA---CAAGGCCCCTCCTCGCTTCCCGCTGTGCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1287448 43 + 114371477 CAGGGTGGG---TGAA---CAAGGCCCCTCCTCGCTTCCCGCCGTGCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1312346 43 + 1464242 CAGGGTGGG---TGAA---CAAGGCCCCTCCTCGCTTCCCGCCGTGCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1043470 43 + 81552678 CAGGGTGGG---TGAA---CAAGGCCCCTCCTCGCTCCCCGCCGTGCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1371825 43 + 108979918 CAGGGTGGG---TGAA---CAAGGCCCCTCCTCGCTCCCCGCCATGCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1344009 43 - 111193037 CAGGGTGGG---TGAA---CAAGGCCCCTCCTCGCTCCCCGCCATGCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1372365 43 + 3644372 CAGGGTGGG---TGAA---CAAGGCCCCTCCTCGCTCCCCGCCATGCTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1326449 43 - 10304083 CAGGGTGGG---TGAA---CAAGGCCCCTCCTCGCTCCCCACCATGCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1397458 43 - 107702431 CAGGGTAGG---TGAA---CAAGGCGCCTCCTCGCTCCCCGCCATGCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 875128 43 - 2200435 CAGGGTGGG---TGAA---CAAGGCCCCTCCTCGCTCCCCGCCATGCTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1313913 43 - 13651311 CAGGGTGGG---TGAA---CAAGGCCCCTCCTCGCTCCCCGCCATGCTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1323475 43 - 108792865 CAGAGTGGG---TGAA---CAAGGTCCCTCCCAGCTCCCCCCTGTGCTA i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1267763 43 + 1864846 CAGAGTGGG---TCAA---CAAGGCCCCTCCCAGCTCGCCGCTGTGCTA i cebCap1.NW_016107827v1 C 0 C 0 s mm10.chr12 89953230 40 - 120129022 CTGGATGTG---GAAGAGCCAAGGTCTCTCC------CTCGATGTGTTG i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1605580 45 + 4416731 CAGAATGAGGTTGTAC---CAAAGTCGTTCACTCCATGTAGGCATGCA- i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1174679 739 - 7082604 M e otoGar3.GL873658 905800 105 + 5252280 M a score=48499.000000 s hg38.chr2_KI270774v1_alt 49860 8 + 223625 TGCACACT s panTro5.chr2A 1326758 8 + 111504155 TGCACACT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1287491 8 + 114371477 TGCACACT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1312389 8 + 1464242 TGCACACT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1043513 8 + 81552678 TGCGCACC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1371868 8 + 108979918 TGCCCACC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1344052 8 - 111193037 TGCCCACC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1372408 8 + 3644372 TGCCCACC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1326492 8 - 10304083 TGCCCACC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1397501 8 - 107702431 TGCCCACC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 875171 8 - 2200435 TGCCCACC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1313956 8 - 13651311 TGCCCACC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1323518 8 - 108792865 TGCCCAGG i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1267806 8 + 1864846 TGCCCAGG i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 905908 8 + 5252280 TGCGCACT i otoGar3.GL873658 M 105 C 0 s mm10.chr12 89953270 1 - 120129022 ----C--- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1605625 8 + 4416731 TGCACTCT i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1174679 739 - 7082604 M a score=362068.000000 s hg38.chr2_KI270774v1_alt 49868 41 + 223625 GCCTATTCTGCGCCACACAGCAGG-CGCTGTTCCTCCCAAGC s panTro5.chr2A 1326766 41 + 111504155 GCCTATTCTGTGCCACACAGCAGG-CGCTGTTCCTCCCAAGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1287499 41 + 114371477 GCCTATTCTGTGCCACACAGCAGG-CGCTGTTCCTCCCAAGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1312397 41 + 1464242 GCCTATTCTGCGCCACACAGCAGG-CGCTGTTCCTCACAAGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1043521 41 + 81552678 GCCTACTCTGCGCCACACAGCAGG-CGCCGTTCCTCCCAAGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1371876 41 + 108979918 GCCTATTCCGCACCACACAGCAGG-CGCTGTTCCTCCCAAGC i rheMac8.chr13 C 0 T 29 s macFas5.chr13 1344060 41 - 111193037 GCCTATTCCGCACCACACAGCAGG-CGCTGTTCCTCCCAAGC i macFas5.chr13 C 0 T 29 s macNem1.NW_012011978v1 1372416 41 + 3644372 GCCTATTCCGCACCACACAGCAGG-CGCTGTTCCTCCCAAGC i macNem1.NW_012011978v1 C 0 T 29 s cerAty1.NW_012000820v1 1326500 41 - 10304083 GCCTATTCCGCACCACACAGCAGG-CGCTGTTCCTCCCAAAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1397509 41 - 107702431 GCCTATTCCGCACCACACAGCAGG-CGCTGTTCCTCCCAAGC i chlSab2.chr14 C 0 T 29 s manLeu1.NW_012103754v1 875179 41 - 2200435 GCCTATTCTGCACCACACAGCAGG-CGCTGTTCCTCCCAAGC i manLeu1.NW_012103754v1 C 0 T 29 s colAng1.NW_012118821v1 1313964 41 - 13651311 GCCTGTTCTGCACCACACAGCAGG-CGCTGTTCCTCCCAAGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1323526 41 - 108792865 GCCTGTTCTGTGCCACACAGCACG-CCCTGTTCCTCCCAAGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1175428 41 - 7082604 GCCTGTTCTGCGCCACACAGCACG-CCCTGTTCCTCCCAAGT i saiBol1.JH378218 M 739 C 0 s cebCap1.NW_016107827v1 1267814 41 + 1864846 GCCTGTTCTGCACCACACAGCATG-CCCTGTTCCTCACAAGC i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 905916 20 + 5252280 -------CGGCACCGCACAGC--T-CGCTG------------ i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89953271 29 - 120129022 ------------TCACACAGCAGGACTCTGCCCTTCTAAAA- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1605633 26 + 4416731 GCTTATTCAATGCCATACAGCTGT-TG--------------- i dasNov3.JH576208 C 0 C 0 a score=6030.000000 s hg38.chr2_KI270774v1_alt 49909 3 + 223625 GTG s panTro5.chr2A 1326807 3 + 111504155 GTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1287540 3 + 114371477 GTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1312438 3 + 1464242 GCG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1043562 3 + 81552678 GCG i nomLeu3.chr19 C 0 C 0 s colAng1.NW_012118821v1 1314005 3 - 13651311 GCG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1323567 3 - 108792865 GCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1175469 3 - 7082604 GCA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1267855 3 + 1864846 GCA i cebCap1.NW_016107827v1 C 0 C 0 e mm10.chr12 89953300 0 - 120129022 C e otoGar3.GL873658 905936 0 + 5252280 C e dasNov3.JH576208 1605659 0 + 4416731 C e manLeu1.NW_012103754v1 875220 29 - 2200435 T e chlSab2.chr14 1397550 29 - 107702431 T e cerAty1.NW_012000820v1 1326541 0 - 10304083 C e macNem1.NW_012011978v1 1372457 29 + 3644372 T e macFas5.chr13 1344101 29 - 111193037 T e rheMac8.chr13 1371917 29 + 108979918 T a score=39129.000000 s hg38.chr2_KI270774v1_alt 49912 25 + 223625 GCCTTGGCATGAAGCCCACACGCAC s panTro5.chr2A 1326810 25 + 111504155 GCCTTGGCATGAAGCCCACACACAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1287543 25 + 114371477 GCCTTGGCATGAAGCCCACACACAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1312441 25 + 1464242 GCCTTGGCATGAAGCCCACATGCAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1043565 25 + 81552678 GCCTTGGCATGAAGCCCACACGCAC i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1323570 22 - 108792865 GT-TTGGCACGACGCCCTTA--CAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1175472 25 - 7082604 GTATTGGCACAACGCCCACACGCAC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1267858 25 + 1864846 GTCTTGGCATGacacccacacacac i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 905936 11 + 5252280 --------------CGCACGTGCGC i otoGar3.GL873658 C 0 I 6 s mm10.chr12 89953300 14 - 120129022 -----------ATGCCCATTATAAG i mm10.chr12 C 0 C 0 e dasNov3.JH576208 1605659 0 + 4416731 C e colAng1.NW_012118821v1 1314008 0 - 13651311 C e manLeu1.NW_012103754v1 875220 29 - 2200435 T e chlSab2.chr14 1397550 29 - 107702431 T e cerAty1.NW_012000820v1 1326541 0 - 10304083 C e macNem1.NW_012011978v1 1372457 29 + 3644372 T e macFas5.chr13 1344101 29 - 111193037 T e rheMac8.chr13 1371917 29 + 108979918 T a score=73899.000000 s hg38.chr2_KI270774v1_alt 49937 9 + 223625 CCACACAGC s panTro5.chr2A 1326835 9 + 111504155 CCACACAGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1287568 9 + 114371477 CCACACAGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1312466 9 + 1464242 CCACACAGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1043590 9 + 81552678 CCACACAGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1371888 9 + 108979918 CCACACAGC i rheMac8.chr13 T 29 C 0 s macFas5.chr13 1344072 9 - 111193037 CCACACAGC i macFas5.chr13 T 29 C 0 s macNem1.NW_012011978v1 1372428 9 + 3644372 CCACACAGC i macNem1.NW_012011978v1 T 29 C 0 s chlSab2.chr14 1397521 9 - 107702431 CCACACAGC i chlSab2.chr14 T 29 C 0 s manLeu1.NW_012103754v1 875191 9 - 2200435 CCACACAGC i manLeu1.NW_012103754v1 T 29 C 0 s calJac3.chr14 1323592 9 - 108792865 CCACACAGC i calJac3.chr14 C 0 I 1 s saiBol1.JH378218 1175497 9 - 7082604 CCACACAGC i saiBol1.JH378218 C 0 T 57 s cebCap1.NW_016107827v1 1267883 9 + 1864846 ccacacagc i cebCap1.NW_016107827v1 C 0 I 73 s otoGar3.GL873658 905953 9 + 5252280 CTGCAGAGC i otoGar3.GL873658 I 6 C 0 s mm10.chr12 89953314 7 - 120129022 TCACACA-- i mm10.chr12 C 0 C 0 e dasNov3.JH576208 1605659 0 + 4416731 C e colAng1.NW_012118821v1 1314008 0 - 13651311 C e cerAty1.NW_012000820v1 1326541 0 - 10304083 C a score=29188.000000 s hg38.chr2_KI270774v1_alt 49946 5 + 223625 AGGCG s panTro5.chr2A 1326844 5 + 111504155 AGGCG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1287577 5 + 114371477 AGGCG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1312475 5 + 1464242 AGGCG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1043599 5 + 81552678 AGGCG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1371897 5 + 108979918 AGGCG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1344081 5 - 111193037 AGGCG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1372437 5 + 3644372 AGGCG i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1397530 5 - 107702431 AGGCG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 875200 5 - 2200435 AGGCG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1323602 5 - 108792865 AGGCG i calJac3.chr14 I 1 C 0 s saiBol1.JH378218 1175449 3 - 7082604 --ACG i saiBol1.JH378218 T 57 I 2 s otoGar3.GL873658 905962 5 + 5252280 TGGTG i otoGar3.GL873658 C 0 I 1 s dasNov3.JH576208 1605659 1 + 4416731 ----G i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89953321 0 - 120129022 C e cebCap1.NW_016107827v1 1267892 73 + 1864846 I e colAng1.NW_012118821v1 1314008 0 - 13651311 C e cerAty1.NW_012000820v1 1326541 0 - 10304083 C a score=192659.000000 s hg38.chr2_KI270774v1_alt 49951 45 + 223625 CTGTTCCTCCCAAGCGTGGCCTTGG-CATGAAGCCCACATGCACCC s panTro5.chr2A 1326849 45 + 111504155 CTGTTCCTTCCAAGCGCGGCCTTGG-CATGAAGCCCACATGCACCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1287582 45 + 114371477 CTGTTCCTTCCAAGCGCGGCCTTGG-CATGAAGCCCACATGCACCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1312480 39 + 1464242 CTGTTCCTCCCAAGCGCGGCCTTGG-CACGAAGCCCACAT------ i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1043604 45 + 81552678 CTGTTCCTCCCAAGCGTGGCCTTGG-CATGAAGCCCACGTGCACCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1371902 45 + 108979918 CTGTTCCTCCCAAGCGCGGCCTTGG-CATGAAGCCCACACGCACCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1344086 45 - 111193037 CTGTTCCTCCCAAGCGCGGCCTTGG-CATGAAGCCCACACGCACCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1372442 45 + 3644372 CTGTTCCTCCCAAGCGCGGCCTTGG-CATGAAGCCCACACGCACCC i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1397535 45 - 107702431 CTGTTCCTCCCAAGCGCGGCCTTGG-CATGAAGCCCACACGCACCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 875205 45 - 2200435 CTGTTCCTCCCAAGCGCGGCCTTGG-CATGAAGCCCACACGCACCC i manLeu1.NW_012103754v1 C 0 T 30 s saiBol1.JH378218 1175454 45 - 7082604 CTGTTCCTCCCAAGTGCAGTATTGG-CACAACGCCCACACGCACCC i saiBol1.JH378218 I 2 C 0 s otoGar3.GL873658 905968 41 + 5252280 CTATTCCTTTGGACCATAGTCTTAGTTATAAAA-----ATGCACAC i otoGar3.GL873658 I 1 C 0 s mm10.chr12 89953321 23 - 120129022 ----------------------TGG-AGGAATGCACACATGCAACC i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1605660 17 + 4416731 CTCTTGCCTCTAACAAT----------------------------- i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1267892 73 + 1864846 I e calJac3.chr14 1323607 0 - 108792865 C e colAng1.NW_012118821v1 1314008 0 - 13651311 C e cerAty1.NW_012000820v1 1326541 0 - 10304083 C a score=15027.000000 s hg38.chr2_KI270774v1_alt 49996 6 + 223625 ACACAG s panTro5.chr2A 1326894 6 + 111504155 ACACAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1287627 6 + 114371477 ACACAG i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1043649 6 + 81552678 ACACAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1371947 6 + 108979918 ATACGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1344131 6 - 111193037 ATACGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1372487 6 + 3644372 ATACGG i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1397580 6 - 107702431 ATACGG i chlSab2.chr14 C 0 C 0 s saiBol1.JH378218 1175499 6 - 7082604 ACACAG i saiBol1.JH378218 C 0 T 57 s otoGar3.GL873658 906009 1 + 5252280 -----G i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89953344 4 - 120129022 --AGGG i mm10.chr12 C 0 I 8 e cebCap1.NW_016107827v1 1267892 73 + 1864846 I e dasNov3.JH576208 1605677 0 + 4416731 C e calJac3.chr14 1323607 0 - 108792865 C e colAng1.NW_012118821v1 1314008 0 - 13651311 C e manLeu1.NW_012103754v1 875250 30 - 2200435 T e cerAty1.NW_012000820v1 1326541 0 - 10304083 C e gorGor5.CYUI01015607v1 1312519 0 + 1464242 C a score=11482.000000 s hg38.chr2_KI270774v1_alt 50002 7 + 223625 CAGGCAC s panTro5.chr2A 1326900 7 + 111504155 CAGGCAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1287633 7 + 114371477 CAGGCAC i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1043655 7 + 81552678 CAGGCGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1371953 7 + 108979918 AAGGCAC i rheMac8.chr13 C 0 T 43 s macFas5.chr13 1344137 7 - 111193037 AAGGCAC i macFas5.chr13 C 0 T 43 s macNem1.NW_012011978v1 1372493 7 + 3644372 AAGGCAC i macNem1.NW_012011978v1 C 0 T 43 s chlSab2.chr14 1397586 7 - 107702431 AAGGCAC i chlSab2.chr14 C 0 T 43 s saiBol1.JH378218 1175448 7 - 7082604 CACGCCC i saiBol1.JH378218 T 57 C 0 s otoGar3.GL873658 906010 5 + 5252280 CAGGC-- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89953356 5 - 120129022 CAGTC-- i mm10.chr12 I 8 C 0 s dasNov3.JH576208 1605677 2 + 4416731 -----AC i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1267892 73 + 1864846 I e calJac3.chr14 1323607 0 - 108792865 C e colAng1.NW_012118821v1 1314008 0 - 13651311 C e manLeu1.NW_012103754v1 875250 30 - 2200435 T e cerAty1.NW_012000820v1 1326541 0 - 10304083 C e gorGor5.CYUI01015607v1 1312519 0 + 1464242 C a score=5136.000000 s hg38.chr2_KI270774v1_alt 50009 14 + 223625 TGTTCCTCCCAAGG s panTro5.chr2A 1326907 14 + 111504155 TGTTCCTCCTAAGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1287640 14 + 114371477 TGTTCCTCCTAAGC i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1043662 14 + 81552678 CGCTCTTCCCAAGC i nomLeu3.chr19 C 0 C 0 s saiBol1.JH378218 1175455 14 - 7082604 TGTTCCTCCCAAGT i saiBol1.JH378218 C 0 C 0 s mm10.chr12 89953361 11 - 120129022 AGTCCCACCCC--- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1605679 7 + 4416731 TATTTGT------- i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1267892 73 + 1864846 I e otoGar3.GL873658 906015 0 + 5252280 C e calJac3.chr14 1323607 0 - 108792865 C e colAng1.NW_012118821v1 1314008 0 - 13651311 C e manLeu1.NW_012103754v1 875250 30 - 2200435 T e chlSab2.chr14 1397593 43 - 107702431 T e cerAty1.NW_012000820v1 1326541 0 - 10304083 C e macNem1.NW_012011978v1 1372500 43 + 3644372 T e macFas5.chr13 1344144 43 - 111193037 T e rheMac8.chr13 1371960 43 + 108979918 T e gorGor5.CYUI01015607v1 1312519 0 + 1464242 C a score=78486.000000 s hg38.chr2_KI270774v1_alt 50023 16 + 223625 GCGGCCTTGGCATGAA s panTro5.chr2A 1326921 16 + 111504155 GCGGCCTTGGCATGAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1287654 16 + 114371477 GCGGCCTTGGCATGAA i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1043676 16 + 81552678 GCGGCCTTGGCATGAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1371917 16 + 108979918 GCGGCCTTGGCATGAA i rheMac8.chr13 T 43 C 0 s macFas5.chr13 1344101 16 - 111193037 GCGGCCTTGGCATGAA i macFas5.chr13 T 43 C 0 s macNem1.NW_012011978v1 1372457 16 + 3644372 GCGGCCTTGGCATGAA i macNem1.NW_012011978v1 T 43 C 0 s cerAty1.NW_012000820v1 1326541 16 - 10304083 GCGGCCTTGGCATGAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1397550 16 - 107702431 GCGGCCTTGGCATGAA i chlSab2.chr14 T 43 C 0 s manLeu1.NW_012103754v1 875220 16 - 2200435 GCGGCCTTGGCATGAA i manLeu1.NW_012103754v1 T 30 C 0 s saiBol1.JH378218 1175469 16 - 7082604 GCAGTATTGGCACAAC i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 906015 8 + 5252280 --------GGCATGGA i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89953372 6 - 120129022 ----------CATGAG i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1605686 4 + 4416731 ------------TAAA i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1267892 73 + 1864846 I e calJac3.chr14 1323607 0 - 108792865 C e colAng1.NW_012118821v1 1314008 0 - 13651311 C e gorGor5.CYUI01015607v1 1312519 0 + 1464242 C a score=28884.000000 s hg38.chr2_KI270774v1_alt 50039 4 + 223625 GCCC s panTro5.chr2A 1326937 4 + 111504155 GCCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1287670 4 + 114371477 GCCC i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1043692 4 + 81552678 GCCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1371933 4 + 108979918 GCCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1344117 4 - 111193037 GCCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1372473 4 + 3644372 GCCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1326557 4 - 10304083 GCCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1397566 4 - 107702431 GCCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 875236 4 - 2200435 GCCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1314008 4 - 13651311 GCCC i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1175485 4 - 7082604 GCCC i saiBol1.JH378218 C 0 C 0 s mm10.chr12 89953378 4 - 120129022 ACTC i mm10.chr12 C 0 I 85 s dasNov3.JH576208 1605690 4 + 4416731 ACAC i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1267892 73 + 1864846 I e otoGar3.GL873658 906023 0 + 5252280 C e calJac3.chr14 1323607 0 - 108792865 C e gorGor5.CYUI01015607v1 1312519 0 + 1464242 C a score=107818.000000 s hg38.chr2_KI270774v1_alt 50043 17 + 223625 ACACGCACCCATACAAA s panTro5.chr2A 1326941 17 + 111504155 ACACGCACCCATACAGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1287674 17 + 114371477 ACACGCACCCATACAGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1312519 13 + 1464242 ----GCACCCATACAGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1043696 17 + 81552678 ACACGCACCCATACAGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1371937 17 + 108979918 ACACGCACCCATACGGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1344121 17 - 111193037 ACACGCACCCATACGGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1372477 17 + 3644372 ACACGCACCCATACGGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1326561 17 - 10304083 ACACGCACCCATACGGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1397570 17 - 107702431 ACACGCACCCATACGGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 875240 17 - 2200435 ACACGCACCCGTACGGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1314012 17 - 13651311 ACACGCACCCGTACGGA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1175489 17 - 7082604 ACACGCACCCACACAGC i saiBol1.JH378218 C 0 I 1 s dasNov3.JH576208 1605694 13 + 4416731 ACACATA-CCATAC--- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89953382 85 - 120129022 I e cebCap1.NW_016107827v1 1267892 73 + 1864846 I e otoGar3.GL873658 906023 0 + 5252280 C e calJac3.chr14 1323607 0 - 108792865 C a score=36132.000000 s hg38.chr2_KI270774v1_alt 50060 5 + 223625 AGGCA s panTro5.chr2A 1326958 5 + 111504155 AGGCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1287691 5 + 114371477 AGGCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1312532 5 + 1464242 AGGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1043713 5 + 81552678 AGGCG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1371954 5 + 108979918 AGGCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1344138 5 - 111193037 AGGCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1372494 5 + 3644372 AGGCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1326578 5 - 10304083 AGGCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1397587 5 - 107702431 AGGCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 875257 5 - 2200435 AGGCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1314029 5 - 13651311 AGGCA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1175507 5 - 7082604 AGGCA i saiBol1.JH378218 I 1 C 0 e mm10.chr12 89953382 85 - 120129022 I e cebCap1.NW_016107827v1 1267892 73 + 1864846 I e otoGar3.GL873658 906023 0 + 5252280 C e dasNov3.JH576208 1605707 0 + 4416731 C e calJac3.chr14 1323607 0 - 108792865 C a score=478453.000000 s hg38.chr2_KI270774v1_alt 50065 72 + 223625 CGGCGGCCTGAGACACAATGGCTAGTTCTGCCAACTCACACAGCACAGGGGTCTGCTGCGACGGGATCCACA s panTro5.chr2A 1326963 72 + 111504155 CGGCGGCCTGAGACACAATGGCTAGTTCTGCCAACTCACACAGCACAGGGGTCTGCCGCGACGGGATCCACA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1287696 72 + 114371477 CGGCGGCCTGAGACACAATGGCTAGTTCTGCCAACTCACACAGCACAGGGGTCTGCCGCGACGGGATCCACA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1312537 72 + 1464242 CGGTGGCCTGAGACACAATGGCTAGTTCTGCCAACTCACACGGCACAGGGGTCTGCCGCGACGGGGTCCACA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1043718 72 + 81552678 CGGAGGCCTGAGACACAACGGCTAGTTCTGCCAACTCACACAGCACAGGGGTCTGCCGCGACGGGATCCACA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1371959 72 + 108979918 CGCAGGCCTGGGACACAATGGCTAGTTCCGCCAACTCACACAGCACAGGGGTCTGCCGCGACGGGATCCACG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1344143 72 - 111193037 CGCAGGCCTGGGACACAATGGCTAGTTCCGCCAACTCACACAGCACAGGGGTCTGCCGCGACGGGATCCACA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1372499 72 + 3644372 CGCAGGCCTGGGACACAATGGCTAGTTCCGCCAACTCACACAGCACAGGGGTCTGCCGCGACGGGATCCACA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1326583 72 - 10304083 CGCAGGCCTGGGACACAATGGCTAGTTCCGCCAACTCACACAGCACAGGGGTCTGCCGCGACGGGATCCACA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1397592 72 - 107702431 CGCAGGCCTGAGACACAATGGCTAGTTCCGCCAACTCACACAGCACAGGGGTCTGCCACGACGGGATCCACA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 875262 72 - 2200435 TGCAGGCCTGGGACACAATGGCTAGTTCCGCCAACTCACACAGCACAGGGGTCTGCCGCGATGGGATCCACA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1314034 72 - 13651311 CGCAGGCCTGAGACACAATGGCTAGTTCCGCCAACTCACACAGCACAGGGGTCTGCCGTGACGGGATCCACA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1323607 70 - 108792865 CACAGGGCTAAGA-ACCACGGCCCGTTCTGCCCACTCACGCAGAATAGGGATTGGCCGCGACGGGACCCTG- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1175512 67 - 7082604 CGCAGGGCTAAG--ACGACAGCCAGTTCTGCCAACTCATGCAGCGTGGGGATGGGC--TGATGGGACCCCA- i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 906023 63 + 5252280 --------TGGTACACAATGGCGACTTTTGCCAAATGACAAACAGCATGAGTGTGTTACCA-GGAGCCCACG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1605707 25 + 4416731 CGTAAGCCTG----ACAAGGCCAAGATTT------------------------------------------- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89953382 85 - 120129022 I e cebCap1.NW_016107827v1 1267892 73 + 1864846 I a score=371239.000000 s hg38.chr2_KI270774v1_alt 50137 44 + 223625 TCACAAAATCACCACAGGTGCTGGGCAGGTGGGGAAGACTGAGT- s panTro5.chr2A 1327035 44 + 111504155 TCACAAAATCACCACAGGTGCTGGGCAGGTGGGGAAGACTGAGT- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1287768 44 + 114371477 TCACAAAATCACCACAGGTGCTGGGCAGGTGGGGAAGACTGAGT- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1312609 44 + 1464242 TTGCAGAATCACCACAGGTGCTGGGCAGGTGGGGAAGACTGAGT- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1043790 44 + 81552678 TCACAAAATCACCACAGGTGCTGGGCAGGTGGGGAAGACTGAGT- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1372031 44 + 108979918 TCACAAAATCACCAGAGGCGCTGGGCAGGTGGGGAAGACTGAGT- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1344215 44 - 111193037 TCACAAAATCACCAGAGGCGCTGGGCAGGTGGGGAAGACTGAGT- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1372571 44 + 3644372 TCACAAAATCACCAGAGGCGCTGGGCAGGTGGGGAAGACTGAGT- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1326655 44 - 10304083 TCACAAAATCACCATAGGCGCTGGGCAGGTGGGGAAGACTGAGT- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1397664 44 - 107702431 TCACAAAATCACCACAGGCGCTGGGCAGGTGGGGAAGACTGAGT- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 875334 44 - 2200435 TCACAGAATCACCATAGGCGCTGGGCAGGTGGGGAAGACTGAGT- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1314106 44 - 13651311 TCACAAAATCACCACAGGCGCTGGGCAGGTGGGGAAGACTGAGT- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1323677 44 - 108792865 CCACAGAATCGCTACAGGTGCTGGGTGGGTAGGGAAGACTGAGT- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1175579 44 - 7082604 TCACAGAATCGCTACAGCTGCTGGGTGGGTAGGGAAGACTGAGT- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1267965 44 + 1864846 TCACAGAGTCACCACAGGTGCCGGGTGGGTAGGGAAGACTGAGT- i cebCap1.NW_016107827v1 I 73 C 0 s otoGar3.GL873658 906086 28 + 5252280 --------------CAGGTCCT--TCATGCAGTGGTGACGGGAG- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1605732 16 + 4416731 -----------------------------TAGTGAAGATTGAGAT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89953382 85 - 120129022 I a score=214110.000000 s hg38.chr2_KI270774v1_alt 50181 38 + 223625 CCTGGCCC--AGATTACGGGGTCTGACTTAATCAAGACCC s panTro5.chr2A 1327079 38 + 111504155 CCTGGCCC--AGATTACGGGGTCTGACTTAATCAAGACCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1287812 38 + 114371477 CCTGGCCC--AGATTACGGGGTCTGACTTAATCAAGACCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1312653 38 + 1464242 CCTGGCCC--AGATTACGGGGTCTGACTTAATCAAGACCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1043834 35 + 81552678 CCTGGCCC--GGATTACCGGGTCTGA---AATCAAGACCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1372075 38 + 108979918 CCTGGCCC--GGATTACCAGGTGTGACTTAATCAAGACCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1344259 38 - 111193037 CCTGGCCC--GGATTACCAGGTGTGACTTAATCAAGACCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1372615 38 + 3644372 CCTGGCCC--GGATTACCAGGTGTGACTTAATCAAGACCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1326699 38 - 10304083 CCTGGCCC--GGATTACCAGGTGTGACTTAATCAAGACCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1397708 38 - 107702431 CCTGGCCC--GGATTACCAGGTCTGACTTAATCAAGACCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 875378 37 - 2200435 CCTGGCCC--GGATTACCAGGTGTGACTTAAT-AAGACCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1314150 38 - 13651311 CCTGGCCC--GGATTACCAGGTCTGACTTAATCAAGACCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1323721 8 - 108792865 C-------------------------CTTTATT------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1175623 36 - 7082604 CT--GGCC--GGATTACTGGGTGTGACTTCATCAAGACCC i saiBol1.JH378218 C 0 I 7 s cebCap1.NW_016107827v1 1268009 35 + 1864846 C---CGGC--GGATTACTGGGTGTGACTTCATCAAGACCC i cebCap1.NW_016107827v1 C 0 I 151 s otoGar3.GL873658 906114 25 + 5252280 CCTGTCCC--TGA---------GCGGCT--GTCAAGTC-- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89953467 19 - 120129022 CCTAGCAC--AAACTAGGGAG------------------- i mm10.chr12 I 85 C 0 s dasNov3.JH576208 1605748 40 + 4416731 CATGGCACTGGGATTATCGGGGCTGACTTGAGCAAGATTC i dasNov3.JH576208 C 0 C 0 a score=845782.000000 s hg38.chr2_KI270774v1_alt 50219 131 + 223625 ATCAC--------TGAAGATGC-AAAATAAAGGAAGTGAGCAT-TAGCC--------------CCCGTTAGGTGCAAGAAAACAA-----GTAAGTTACATTCTCAGCGTTGTAAT--------AAAAAATACCCAGTATA----TTCATGTTTATAACCAATTTGGATCAT----------- s panTro5.chr2A 1327117 131 + 111504155 ATCAC--------TGAAGATGC-AAAATAAAGGAAGTGAGTAT-TAGCC--------------CCCATTAGGTGCAAGAAAACAA-----GTAAGTTACATTCTCAGCGTTGTAAT--------AAAAAATACCCAGTATA----TTCATGTTTATAACCAATTTGGATCAT----------- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1287850 131 + 114371477 ATCAC--------TGAAGATGC-AAAATAAAGGAAGTGAGTAT-TAGCC--------------CCCATTAGGTGCAAGAAAACAA-----GTAAGTTACATTCTCAGCGTTGTAAT--------AAAAAATACCCAGTATA----TTCATGTTTATAACCAATTTGGATCAT----------- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1312691 119 + 1464242 ATCAC--------TGAAGATGC-AAAATAAAGGAAGTGAGTAT-TAG-C--------------CCCATTAGGTGCAAGAAAACAA-----GTAAGTTACATTCTCAGCGTTGTAAT--------AAAAAATACCCAGCATA----TTCATGTTTATAACCA---------------------- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1043869 120 + 81552678 ATCAC--------TAAAGATGC-AAAATAAAGGAAGTGAGTAT-TAGCC--------------CCCGTTCGGTGCAAGAAAACAA-----GTAAGTTATATTCTCAGCGTTGTAAT--------AAAAAATACCCGGTATA----TTCATGTTTATAACCA---------------------- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1372113 121 + 108979918 ATCACTGATCAA-TGAGGATGC-AAAATAAAGGA----AGTAT-TAGCT--------------CCCGTTAGGTGCAAGAAAACAA-----GTAAGTTACAATCTCAGCGTTGTAAT--------AAAAAATACC--GTATA----TTCATGTTTGTAACCA---------------------- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1344297 125 - 111193037 ATCACTGATCAA-TGAGGATGC-AAAATAAAGGAAGTGAGTAT-TAGCT--------------CCCGTTAGGTGCAAGAAAACAA-----GTAAGTTACAATCTCAGCGTTGTAAT--------AAAAAATACC--GTATA----TTCATGTTTGTAACCA---------------------- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1372653 125 + 3644372 ATCACTGATCAA-TGAGGATGC-AAAATAAAGGAAGTGAGTAT-TAGCT--------------CCCGTTAGGTGCAAGAAAACAA-----GTAAGTTACAATCTCAGCGTTGTAAT--------AAAAAATACC--GTATA----TTCATGTTTGTAACCA---------------------- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1326737 125 - 10304083 ATCACTGATCAA-TGAGGATGC-AAAATAAAGGAAGTGAGTAT-TAGCT--------------CCCGTTAGGTGCAAGAAAACAA-----GTAAGTTACAATGTCAGCGTTGTAAT--------AAAAAATACC--GTATA----TTCATGTTTGTAACCA---------------------- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1397746 128 - 107702431 ATCACTGATCAA-TGAGGATGC-AAAATAAAGGAAGTGAGTAT-TAGCT--------------CTCGTTAGGTGCAAGAAAACAA-----GTAAGTTACAATCTCAGCGTTGTAATA-------AAAAAATACCCAGTATA----TTCATGTTTGTAACCA---------------------- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 875415 125 - 2200435 ATCACTGATCCA-TGAGGATGC-AAAATAAAGGAAGTGAGTAT-TAGCT--------------CCCGTTAGGTGCAAGAAAACAA-----GTAAGTTACAATCTCAGCGTTGCAAT--------AAAAAATACC--GTATA----TTCATGTTTGTAACCA---------------------- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1314188 127 - 13651311 ATCACTGATCGA-TGAGGATGC-AAAATAAAGGAAGTGAGTAT-TAGCT--------------CCCGTTAGGTGCAAGAAAACAA-----GTAAGTTACAATCTCAGCGTTGTAAT--------AAAAAATACCCAGTGTA----TTCATGTTTGTAACCA---------------------- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1323729 97 - 108792865 -----------------TATGC-AAAATAAAGGA----AGTAT-TAGC---------------CCCGTTAGGTGCAGGAAAACAA-----GTGAGTTACATGCTGAGCGTTGTAAT--------GAAAACCACCCAGTG-------------TTATAATGA---------------------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1175666 110 - 7082604 -------ATCAA-TGAGGATGC-AAAATAAAGGA----AGTAT-TAGCG--------------CCCACTAGGTGCAAGAAAACAA-----GTAAGTTACATTCTCAGCGTTGCAAT--------TAAAACTACCCAGCGTA----------TTTATAATGA---------------------- i saiBol1.JH378218 I 7 C 0 s cebCap1.NW_016107827v1 1268195 116 + 1864846 -------ATCAA-TGAGGATGC-AAAATAAAGGA----AGTAT-GAGCC--------------CCCGTTAGGTGAAAGAAAATAA-----GTAAGTTACATTCTCAGCGTTGTAAT--------TAAAACTACCCAGGGTA----TTTATGTTTATAACGA---------------------- i cebCap1.NW_016107827v1 I 151 C 0 s otoGar3.GL873658 906139 125 + 5252280 ---------------AGGCTGA-AAAACCAGGAAAATGCGCCT-CAGCCTTGCCTCGTCCCTACTCCTGGGGTAGAAGGAAA-AA-----ATGCACTAAACTACCCGAGTAGTAAT--------ACTAATAAAATAGCAT-----TTTATGGTCTTAGCCA---------------------- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89953486 113 - 120129022 ----------------GGATGCTGAATTAAAGGGCATGCATCC-CACCC--------------TGTATGGAGATTAAGGAGACA-------CAGCCTAGGTTGTCTGAGTACCAAT--------ATGAACAACA--GTATATCTATCCATCCTCATAAATA---------------------- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1605788 153 + 4416731 AGCACGGATCAATTTGGGATGC-AAAATAAAGGAAAGTTGTATCTAACC--------------TATGGTGATTATAAGAAAATAAAGAACAAAAATTAAATCGTCAAGGTATAAATGCAAAAACAAAAAACAAAAAGTATA----TTCATGTTTATAGTTA-----------CCTTTGATCAT i dasNov3.JH576208 C 0 I 195 a score=174602.000000 s hg38.chr2_KI270774v1_alt 50350 19 + 223625 GATTTGGATCATGTTACTC s panTro5.chr2A 1327248 19 + 111504155 GATTTGGATCATGTTACTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1287981 19 + 114371477 GATTTGGATCATGTTACTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1312810 18 + 1464242 -ATTTGGATCATGTTACTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1043989 18 + 81552678 -ATTTGGATCATGTTACTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1372234 18 + 108979918 -ATTTGGATCATATTACTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1344422 18 - 111193037 -ATTTGGATCATATTACTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1372778 18 + 3644372 -ATTTGGATCATATTACTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1326862 18 - 10304083 -GTTTGGATCATATTACTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1397874 18 - 107702431 -ATTTGGATCATATTACTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 875540 18 - 2200435 -GTTTGGATCATATTACTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1314315 18 - 13651311 -ATTTGAATCATATTACTC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1323826 18 - 108792865 -ATTTGGATCATGTTACTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1175776 18 - 7082604 -ATTTGGATCATGTCACTC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1268311 18 + 1864846 -ATTTGGATCATGTTACTC i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 906264 16 + 5252280 -ATCTT--TGATATTACTC i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89953599 19 - 120129022 TATGTTGATTGTGCTGCGC i mm10.chr12 C 0 C 0 e dasNov3.JH576208 1605941 195 + 4416731 I a score=5000397.000000 s hg38.chr2_KI270774v1_alt 50369 452 + 223625 TGCCTTTTACTTTAAACCATACATATTTCCTGTCTATTATTATTTTTTTGGAGGGACTTTCTTGGAGTTCACAAGGTCCAAACTTTGTTAAATATTTTTGTAACGTG-TTCTTCCAACAATTATAATAAACACTTGATCTGA---T-------T--TTCTCCTCCAGGAACTCGAGTTCCAGGACCTGAGGGCTGTCCTGCACTGCATCCACTCCTTCATAGCAGCCAAGGTGGCCTCCGTGGACCCCGGCTTCATGGACAGTCAGAGTCTTGCCAGAAAATACATGTACAGCAGCTAAAGGTTGTTTCTGTTGAGTGCTGAAA--AATTAAATTATTTTCGTAAGAAATGATTCTTTCCTGCAGAATATTGCAACTTTGTGTTGTTTTATGATGAGCCTATAGTTGTGATAC--------CAATAAAACATGTCACTAGTTTCCAA--AGACGGGTCCTCCTTGTTAAATCTGACA s panTro5.chr2A 1327267 452 + 111504155 TGCCTTTTACTTTAAACCATACGTATTTCCTGTGTATTATTACTTTTTTGGAGGGACTTTCTTGGAGTTCACAAGGTCCAAACTTTGTTAAATATTTTTGTAACGTG-TTCTTCCAACAATTATAATAAACACTTGATCTGA---T-------T--TTCTCCTCCAGGAACTCGAGTTCCAGGACCTGATGGCTGTCCTGCACTGCATCCACTCCTTCATAGCAGCCAAGGTGGCCTCCGTGGACCCCGGCTTCATGGACAGTCAGAGTCTTGCCAGAAAATACATGTACAGCAGCTAAAGGTTGTTTCTGTTGAGTGCTGAAA--AATTAAATTATTTTCGTAAGAAATGATTCTTTCCTGCAGAATATTGCAACTTTGTGTTGTTTTATGATAAGCCTATAGTTGTGATAC--------CAATAAAACATGTCACTAGTTTCCAA--AGACGGGTCCTCCTTGTTAAATCTGACA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1288000 452 + 114371477 TGCCTTTTACTTTAAACCATACGTATTTCCTGTGTATTATTACTTTTTTGGAGGGACTTTCTTGGAGTTCACAAGGTCCAAACTTTGTAAAATATTTTTGTAACGTG-TTCTTCCAACAATTATAATAAACACTTGATCTGA---T-------T--TTCTCCTCCAGGAACTCGAGTTCCAGGACCTGACGGCTGTCCTGCACTGCATCCACTCCTTCATAGCAGCCAAGGTGGCCTCCGTGGACCCCGGCTTCATGGACAGTCAGAGTCTTGCCAGAAAATACATGTACAGCAGCTAAAGGTTGTTTCTGTTGAGTGCTGAAA--AATTAAATTATTTTCGTAAGAAATGATTCTTTCCTGCAGAATATTGCAACTTTGTGTTGTTTTATGATAAGCCTATAGTTGTGATAC--------CAATAAAACATGTCACTAGTTTCCAA--AGACGGGTCCTCCTTGTTAAATCTGACA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1312828 452 + 1464242 TGCATTTTACTTTAAACCATATGTATTTCCTGTGTATTATTACTTTTTTGGAGGGACTTTCTTGGAGTTCACAAGGTCCAAACTTTGTTAAATATTTTTGTAACGTG-TTCTTCCAACAATTATAATAAACACTTGGTCTGA---T-------T--TTCTCCTCCAGGAACTCGAGTTCCAGGACCTGACGGCTGTCCTGCACTGCATCCACTCCTTCATAGCAGCCAAGGTGGCCTCCGTGGACCCCGGCTTCATGGACAGTCAGAGTCTTGCCAGAAAATACATGTACAGCAGCTAAAGGTTGTTTCTGTTGAGTGCTGAAA--AATTAAATTATTTTCGTAAGAAATGATTCTTTCCTGTACAATATTGCAACTTTGTGTTGTTTTATAATGAGCCTATAGTTGTGATAC--------CAATAAAACATGTCACTAGTTTCCAA--AGACGGGTCCTCCTTGTTAAATCTGACA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1044007 452 + 81552678 TGCCTTTTACTTTAAACCATACGTATTTCCTGTGTATTATTACTTTTTTGGAGGGACTTTCTTGGAGTTGACAAGGTCCAAGCTTTGTTAAATATTTTTGTAACGTG-CTCTTCCAACAATTATAATAAACACTTGATCTGA---T-------T--TTCTCCTCCAGGAACTCGAGTTCCAGGACCTGACGGCTGTCCTACACTGCATCCATTCCTTCATAGCAGCCAAGGTGGCCTCCGTGGACCCCGGCTTCATGGACAGTCAGAGTCTTGCCAGAAAATACATGTACAGCAGCTAAAGGTTGTTTCTGTTGAGTGCTGAAA--AATTAAATTATTTTCGTAAGAAATGATTCTTTCCTGCACAATATTGTAACTTTGTGTTGTTTTATAATGAGACTATAGTTGTGATAC--------CAATAGAACATGTCACTAGTTTCCAA--AGACGGGTCCTCCTTGTTAAATCTGACA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1372252 452 + 108979918 TGCCTTTTACTTTAAACCATATGTATTTCCTGTGTATTGTTACTCTCTTGGAGGGACTTTCTTGGAGTTCACAAGGTCCAAACTTTGTTAAATATTTTTGTAACGTG-TTCTTCCAACAATTGTAATAAACACTTGATCTGA---T-------G--TTCTCCTCCAGGAACTCGAGTTCCAGGACCTGACGGCTGTCCTGCACTGCGTCCACTCCTTCATAGCAGCCAAGGTGGCCTCCGTGGACCCCGGCTTCGTGGACAGTCAGAGTCTTGCCACCAAATACATGTACAGCAGCTAAAGGTTGTTTCTGTTGAGTGCTGAAA--AATTAAATTATTTTCGTAAGAAATGATTCTTTCCTGCATAATATTGCAACTTTGTGTTGTTTTATAATGAGCCTATAGTTGTGATAC--------CAATAAAACATGTCACTAGTTTCCAA--AGATGGGTCCTCCTTGTTAAATCTGACA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1344440 452 - 111193037 TGCCTTTTACTTTAAACCATATGTATTTCCTGTGTATTGTTACTCTCTTGGAGGGACTTTCTTGGAGTTCACAAGGTCCAAACTTTGTTAAATATTTTTGTAACGTG-TTCTTCCAACAATTGTAATAAACACTTGATCTGA---T-------G--TTCTCCTCCAGGAACTCGAGTTCCAGGACCTGACGGCTGTCCTGCACTGCGTCCACTCCTTCATGGCAGCCAAGGTGGCCTCCGTGGACCCCGGCTTCATGGACAGTCAGAGTCTTGCCACCAAATACATGTACAGCAGCTAAAGGTTGTTTCTGTTGAGTGCTGAAA--AATTAAATTATTTTCGTAAGAAATGATTCTTTCCTGCATAATATTGCAACTTTGTGTTGTTTTATAATGAGCCTATAGTTGTGATAC--------CAATAAAACATGTCACTAGTTTCCAA--AGATGGGTCCTCCTTGTTAAATCTGACA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1372796 452 + 3644372 TGCCTTTTACTTTAAACCATATGTATTTCCTGTGTATCGTTACTCTCTTGGAGGGACTTTCTTGGAGTTCACAAGGTCCAAACTTTGTTAAATATTTTTGTAACGTG-TTCTTCCAACAATTATAATAAACACTTGATCTGA---T-------G--TTCTCCTCCAGGAACTCGAGTTCCAGGACCTGACGGCTGTCCTGCACTGCATCCACTCCTTCATAGCAGCCAAGGTGGCCTCCGTGGACCCCGGCTTCATGGACAGTCAGAGTCTTGCCACCAAATACATGTACAGCAGCTAAAGGTTGTTTCTGTTGAGTGCTGAAA--AATTAAATTATTTTCGTAAGAAATGATTCTTTCCTGCATAATATTGCAACTTTGTGTTGTTTTATAATGAGCCTATAGTTGTGATAC--------CAATAAAACATGTCACTAGTTTCCAA--AGATGTGTCCTCCTTGTTAAATCTGACA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1326880 452 - 10304083 TGCCTTTTACTTCAAACCATATGTATTTCCTGTGTATTATTACTCTCTTGGAGGGACTTTCTTGGAGTTCACAAGGTCCAAACTTTGTTAAATATTTCTGTAACGTG-TTCTTCCAACAATTATAATGAACACTTGATCTGA---T-------T--TTCTCCTTCAGGAACTCGAGTTCCAGGACCTGACGGCTGTCCTGCACTGCATCCACTCCTTCATAGCAGCCAAGGTGGCCTCCGTGGACCCCGGCTTCATGGACAGTCAGAGTCTGGCCACCAAATACATGTACAGCAGCTAAGGGTTGTTTCTGTTGAGTGCTGAAA--AATTAAATTATTTTCGTAAGAAATGATTCTTTCCTGCATAATATTGCAACTTTGTGTTGTTTTATAATGAGCCTATAGTTGTGATAC--------CAATAAAACATGTCACTAGTTTCCAA--AGATGGGTCCTCCTTGTTAAATCTGACA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1397892 452 - 107702431 TGCCTTTTACTTTAAACCATACGTATTTCCTGTGTATTATTACTTTCTTGGAGGGACTTTCTTGGAGTTCACAAGGTCCAAACTTTGTTAAATATTTTTGTAACGTG-TTCTTCTAACAATTATAATAAACACTTGATCTGA---T-------T--TTCTCCTCCAGGAACTCGAGTTCCAGGACCTGACGGCTGTCCTGCACTGCATCCACTCCTTCATAGCAGCCAAGGTGGCCTCCGTGGACCCCGGCTTCATGGACAGTCAGAGTCTTGCCACCAAATACATGTACAGCAGCTAAAGGTTGTTTCTGTTGAGTGCTGAAA--AATTAAATTATTTTCGTAAGAAATGATTCTTTCCTGCATAACATTGCAACTTTGTGTTGTTTTATAATGAGCCTATAGTTGTGATAC--------CAATAAAATATGTCACTAGTTTCCAA--AGATGGGTCCTCCTTGTTAAATCTGACA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 875558 452 - 2200435 TGCCTTTTACTTTAAACCATATGTATTTCCTGTGTATTATTACTTTCTTGGAGGGACTTTCTTGGAGTTCACAAGGTCCAAACTTTGTTAAATATTTTTGTAACGTG-TTCTTCCAACAATTATAATAAACACTTGATCTGA---C-------T--TTCTCCTGCAGGAACTCGAGTTCCAGGACCTGACGGCTGTCCTGCACTGCATCCACTCCTTCCTAGCAGCCAAGGTGGCCTCCGTGGACCCCGGCTTCATGGACAGTCAGAGTCTGGCCACAAAGTACATGTACAACAGCTAAGGGTTGTTTCTGTTGAGTGCTGAAA--AATTAAATTATTTTCGTAAGAAATGATTCTTTCCTGCATAATATTGCAACTTTGTGTTGTTTTATAATGAGCCTATAGTTGTGATAC--------CAATAAAACATGTCACTAGTTTCCGA--AGATGGGTCCTCCTTGTTAAATCTGACA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1314333 452 - 13651311 TGCCTTTTACTTTAAACCATCCGTATTTCCTGTGTATTATTACTTTTTTGGAGGGACTTTCTTGGAGTTCACAAGGTCCAAACTTTGTTAAATATTTTTGTAACGTG-TTCTTGCAACAATTGTAGTAAACACTTGATCTGA---T-------T--TTCTCCTCCAGGAACTGGAGTTCCAGGACCTGACGGCTGTCCTGCACTGCATCCACTCCTTCATAGCAGCCAAGGTGGCCTCCGTGGACCCCGGCTTCATGGAGAATCAGAGTCTTGCCAGAAAATACATGTTCAGCAGCTAAAGGTTGTTTCTGTTGAGTGCTGAAA--AATTACATTATTTTCGTAAGAAATGATTCTTTCCTGCATAATATTGCAACTTTGTGTTGTTTTATAATGAGCCGATAGTTGTGATAC--------CAATAAAACATGTCACTAGTTTCCCA--AGATGGGTCCTCCTTGTTAAATCTGACA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1323844 442 - 108792865 -----TTTACTTTAAAACATGTGTTTTTCCTGTGTCCTTTTTGGCTTTTGGAGGGACTTTCTTGGAGTTCAGAAGTTCCAAACTTTGTTAAATATTTTTGTTACATG-CCCTTCCAACAATTATGATAAACACTAGATCTGA---T-------T--TTCTCTGACAGGAGCTGGAGTTCCAGGACCTGACCGCCGTCCTGCACTGCATCCACGCCTTCATCGCCGCCAAGGTGGCCTCCGTGGACCCCGGGTTCGTGGACAGTCAGAGTCTTGCCAAAAAATACATGTACAGCAACTAAAGGTTGTCCCTGTTGAGTGCTGAAA--A-----ATTATTTTCTTAAGAAATTATTCTTTCCTGTACAATATTGCAACTTTGTGTGGTTTCATAATCAGCCTATAGTTGTGATAC--------CAATAAAACATGCTGCTGCTTTGCAA--AGATGGGTCCTCCTTGTTAAATCTGACA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1175794 447 - 7082604 TGCCTTCTACTTTAAATGATATGTTTTTCCTATGTACTTTTTGTTTTTTGGAGGGACTTTCTTGGAGTTCAGAAGTTTCAAACTTTGTTAAATATTTTTGCAACATG-CTCTTCCAACAATTATGATAAACACTGGATCTGA---T-------T--TTCTCCGACAGGAGCTGGAGTTCCAGGACCTGACCGCTGTCCTGCACTGCATCCACGCCTTCATCGCAGCCAAGGTGGCCTCCGTCGACCCCGGGTTCATGGACAGTCAGAGTCTTGCCAGAAAATACATGTACAGCAACTAAAGGTTGTCTCTGTTGAGTGCTTAAA--A-----ATTATTTTCTTAAGAAATGATTCTTTCCTGCACAATATTGCAACTCTGTGTGGTTTTATAATCAGCGTATAGTTGTGATAT--------CAATAAAACATGCCGCTACTTTCCAA--AGATGGGTCCTCCTTGTTAAATCCAACA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1268329 447 + 1864846 TGCTTTTTACTTTAAACCATACGTTTTTCTTGTGTACTCTTTGTTTTTTGGAGGGACTTTCTTGGAGTTCAGAAGCTTCAAACTTTGTTAAATATTTTTGCAACATG-CTCTTCCAACAATAATAATAAACACTGGATCTGA---T-------T--TTCTCCGACAGGAGCTAGAGTTCCAGGACCTGACCTCTGTTCTGCACTGCATCCATGCCTTCATCGCAGCCAAGGTGGCCTCCGTGGACCCCGGGTTCATGGACAGTCAGAGTCTTGCCAGAAAATACATGCACAGCAACTGAAGGTTGTGTCTGTTGAGTGCTGAAA--A-----ATTATTTTCTTAAGAAATGATTCTTTCCTGCACAATATTGCAACTTTGTGTGGTTTTATAATCAGCGTATAGTTGTGATAC--------CAATAAAATGTGCCACTACTTTCCAA--AGATGGGTCCGCCTTGTTAAATCCAACA i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 906280 433 + 5252280 TGCCTTCTACTT----CCTTCCG----TCATGTGTAATTTTACTTT------------------GAGTTTACAAAG-CAGAAATTTGTTAAGTATGTTTGCAACACA-CTCTCCCAATAATTATAATAAACAC---ATCTAA---TTGTATGGT--TTTTTTTACAGGAACTGGAGTTTCAGGACCTGACAGCCGTGCTCCATTGCATCCACTCCTTCATAGCGGCCAAAGTGGCCTCGGTGGATCCCAAGTTTATGGACAGTCAGAGCATCGCGAGGAAATACACGTGTTGCAGCTAAAGATGGTTCCTGACCAGTGCCGGAA--GATTACGTTATTTTCTTAAGAAGGGATTCTTTCCTGCACCGTATTGCAACTTTGTGTGATTTTATAATGAGCCGATCGTTGTGATATGAATATGACAATGAAATATGTCACCAGTTTCCAA--AGACGGGTCACCCTGGTTAAATCC---- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89953618 440 - 120129022 TGCCTTTATTTTGACATTACCTGTTTCAGCAAC-TATTTGTACTTACTTAGAGAACAAGTCTTGGAGTTCACAAAGAACTGAATTTGCTAAAAGTTGCCGTAGAGCA-CCTTCCCAGTGACCACAGT----------CCTGT---T-------TCGTTTCCCCTCAGGAGCTGGAGTTCCAGGATTTGACGGCGGTCCTCCACTGCATCCACTCCTTCATTGCCGCCAAGGTGGCCTCCCTGGACCCCGTGTTCATGGATAGCCAGAGTATGGCAAGAAGATACCTGTGCAGCAGCTAAAACAAGTT--TGAAGAGTGCTGCAAGCAATTAAATTATTTTCTTAAGAAACTAATCTTTCCTGCACAATGTTGCACCTTTGTGTGGTTTTATAATGAGCCTATAGTTGTGATAC--------CAATAAAG-ACATCACTAGTTT-CAC--AGATGGGTCAGACT-GTTGAATGTGACA i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1606136 448 + 4416731 TGTCTTTCACTTTGAAACTTATTTATTTCATGTGTATTCTTAT-------GAGTAACTATCATGGAGTTCACAAAATACGGAAGGTGTTAAATATTTTTGTAATGTGTTTTTTCCAATAATTATAATCTATACT---TTTAAATTT-------T--TTTTCTTACAGGAACTTGAATTTCAGGATTTGACGGCTGTTCTGCATTGCATACACTCCTTTATAGCAGCAAAGGTGGCCTCAGTGGATCCTGTGTTTATAGACAGTCAGAGTATTGCAAGAAAATACATGTATAGCAACTAAAAAGTGCTGCTGTTGAGTGCTGAAA--AATTAAATTATTTTCTTAGGAAATGAATCTTTCCTGCACAATATTACAATTTTGTGTGATTTTATAATGAGCCTATAGTTGTGATAC--------CAATAAAATATGTCATTAGTTTCCAAATATATGGGTCATACTTGCTAAATCTGACA i dasNov3.JH576208 I 195 I 62 a score=770158.000000 s hg38.chr2_KI270774v1_alt 50821 101 + 223625 TGGGGGATGCCTGGTCCCCTCTTCCCATGAGTCTCCCCCCA--ACGAGGAGCCCCAGCGTCCCCCACACAAGTCTGT--GGCTCAGACTCCAGTCCACCTGATGC s panTro5.chr2A 1327719 101 + 111504155 TGGGGGATGCCTGGTCCCCTCTTCCCATGAGTCTCCCCCCA--ATGAGGAGCCCCAGCGTCCCCCACACAAGTATGT--GGCTCAGACTCCAGTCCACCTGATGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1288452 101 + 114371477 TGGGGGATGCCTGGTCCCCTCTTCCCATGAGTCTCCCCCCA--ATGAGGAGCCCCAGCGTCCCCCACACAAGTATGT--GGCTCAGACTCCAGTCCACCTGATGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1313280 101 + 1464242 TGGGGGATGCCTGGTCCCCTCTTCCCATGAGTCTCCCCCCA--ACAAGGAGCCCCAGCGTCCCCCACACAAGTCTGT--GGCTCAGACTCCAGTCCACCTGACGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1044459 101 + 81552678 TAGGGGATGCCTGGTCCCCTCTTCCCACGAGTCTCCCCCCA--GTGAGGAGCCCCAGCGTCCCCCACACAAGTCTGT--GGCTCGGACTCCAGTCCACCTGATGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1372704 101 + 108979918 TGGGGGATGCCTGGTCCCCTCTTCCCACGAGTCTCCCCTCA--ACGAGGAGCCCCAGCATCCCCCACACAAGTCTGT--GGCTCAAACTCCAGTCCACCTGATGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1344892 101 - 111193037 TGGGGGATGCCTGGTCCCCTCTTCCCACGAGTCTCCCCTCA--ACGAGGAGCCCCAGCATCCCCCACACAAGTCTGT--GGCTCAAACTCCAGTCCACCTGATGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1373248 101 + 3644372 TGGGGGATGCCTGGTCCCCTCTTCCCACGAGTCTCCCCTCA--ACGAGGAGCCCCAGCATCCCCCACACAAGTCTGT--GGCTCAAACTCCAGTCCACCTGATGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1327332 101 - 10304083 TGGGGGATGCCTGGTCCCCTCTTCCCACGAGTCTCCCCTCA--ACGAGGAGCCCCAGCATCCCCCACACAAGTCTGT--GGCTCAAACTCCAGTCCACCTGATGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1398344 101 - 107702431 TGGGGGATGCCTGGTCCCCTCTTCCCACGAGTCTCCCCTCA--ACGAGGAGCCCCAGCATCCCCCACACAAGTCTGT--GGCTCAAACTCCAGTTCACCTGATGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 876010 101 - 2200435 TGGGGCATGCCTGGTCCCCTCTTCCCACGAGTCTCCCCTCA--ACGAGGAGCCCCAGCATCCCCCACACAAGTCTGT--GGCTCAAACTCCAGTCCACCTGATGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1314785 101 - 13651311 TGGGACATGCCTGGTCCCCTCTTCCCACGAGTCTCCCCTCA--ACAAGGAACCCCCGCATCCCCCACACAAGTCTGT--GGCTCAAACTCCAGTCCACCTGATGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1324286 104 - 108792865 TGGGAGACGCCTGGTCCTCTCTTCCCATGAGTCTCTCCCCGCCACGAGTGGGCCCGGTGTCCCCCATGCAAGACTGTGGGGCCCAGACTCCAGTTCACCTGAC-T i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1176241 104 - 7082604 TGGGGGACGCCTGGTCCCCTCTTCGCATGAGTCTCTCCCTGCCACGAGTAGGCCCAGCGTCCCCCACGCAAGGCTGTGGGGCTCAGACTCCATTTCACCTGAC-T i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1268776 104 + 1864846 TGGGGGACACCTGATCCCCTCTAGCCATGAGTCTCTCCCCTCCACGAGTAGGCCCGGCGTCCCCCACGCAAGGCTGTGGGGCTCAGACTCCAGTTCATCTGAC-C i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 906713 53 + 5252280 ------ACGCGTGA------------GCGGGTCTGTTCACA---------------------------CAAACCCGA--GGCTGAGG---GAACTCAGCAGA--C i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89954058 57 - 120129022 ATAGG-------------------------GTATCAATCTG--ACCAGG-------------------CACAGTGGT--GGTAGGAACTCAGGGTCCTCTGAAAC i mm10.chr12 C 0 C 0 e dasNov3.JH576208 1606584 62 + 4416731 I a score=106754.000000 s hg38.chr2_KI270774v1_alt 50922 12 + 223625 AGTTCACGCCCC s panTro5.chr2A 1327820 12 + 111504155 AGTTCACACCCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1288553 12 + 114371477 AGTTCACACCCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1313381 12 + 1464242 AGTTCACGCCCC i gorGor5.CYUI01015607v1 C 0 I 1 s nomLeu3.chr19 1044560 12 + 81552678 AGTTCACGCCCC i nomLeu3.chr19 C 0 I 1 s rheMac8.chr13 1372805 12 + 108979918 AGTTCACACCCC i rheMac8.chr13 C 0 I 1 s macFas5.chr13 1344993 12 - 111193037 AGTTCACACGCC i macFas5.chr13 C 0 I 1 s macNem1.NW_012011978v1 1373349 12 + 3644372 AGTTCACACCCC i macNem1.NW_012011978v1 C 0 I 1 s cerAty1.NW_012000820v1 1327433 12 - 10304083 GGTTCACGCCCC i cerAty1.NW_012000820v1 C 0 I 1 s chlSab2.chr14 1398445 12 - 107702431 AGTTCACGCCCC i chlSab2.chr14 C 0 I 119 s manLeu1.NW_012103754v1 876111 12 - 2200435 AGTTCACGCCCC i manLeu1.NW_012103754v1 C 0 I 1 s colAng1.NW_012118821v1 1314886 12 - 13651311 AGTTCACGCCCC i colAng1.NW_012118821v1 C 0 I 1 s calJac3.chr14 1324390 12 - 108792865 GGTTCACACCCT i calJac3.chr14 C 0 I 1 s saiBol1.JH378218 1176345 12 - 7082604 GGTTCACACCCT i saiBol1.JH378218 C 0 I 1 s cebCap1.NW_016107827v1 1268880 12 + 1864846 GGTTCACACCCT i cebCap1.NW_016107827v1 C 0 I 1 s otoGar3.GL873658 906766 10 + 5252280 AGCACGCACC-- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89954115 11 - 120129022 TATCC-CATCCC i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1606646 12 + 4416731 AATTCACATCAC i dasNov3.JH576208 I 62 C 0 a score=55142.000000 s hg38.chr2_KI270774v1_alt 50934 8 + 223625 AGCCCGCA-------- s panTro5.chr2A 1327832 8 + 111504155 AGCCCGCA-------- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1288565 8 + 114371477 AGCCCGCA-------- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1313394 8 + 1464242 AGCCCACA-------- i gorGor5.CYUI01015607v1 I 1 C 0 s nomLeu3.chr19 1044573 8 + 81552678 AGCCCGCA-------- i nomLeu3.chr19 I 1 C 0 s rheMac8.chr13 1372818 8 + 108979918 AGCCCGTG-------- i rheMac8.chr13 I 1 C 0 s macFas5.chr13 1345006 8 - 111193037 AGCCCGTG-------- i macFas5.chr13 I 1 C 0 s macNem1.NW_012011978v1 1373362 8 + 3644372 AGCCCGTG-------- i macNem1.NW_012011978v1 I 1 C 0 s cerAty1.NW_012000820v1 1327446 8 - 10304083 AGCCCGCA-------- i cerAty1.NW_012000820v1 I 1 C 0 s chlSab2.chr14 1398576 8 - 107702431 AGCCCGCG-------- i chlSab2.chr14 I 119 C 0 s manLeu1.NW_012103754v1 876124 8 - 2200435 AGCCCGCA-------- i manLeu1.NW_012103754v1 I 1 C 0 s colAng1.NW_012118821v1 1314899 8 - 13651311 AGCCCACA-------- i colAng1.NW_012118821v1 I 1 C 0 s calJac3.chr14 1324403 8 - 108792865 GGCCCGCA-------- i calJac3.chr14 I 1 C 0 s saiBol1.JH378218 1176358 8 - 7082604 GGCCCGCA-------- i saiBol1.JH378218 I 1 M 2882 s cebCap1.NW_016107827v1 1268893 8 + 1864846 GGCCTGCA-------- i cebCap1.NW_016107827v1 I 1 C 0 s otoGar3.GL873658 906776 6 + 5252280 --TGTGCA-------- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89954126 8 - 120129022 AGCCTGTC-------- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1606658 16 + 4416731 GTTCTGCTGTTATTTC i dasNov3.JH576208 C 0 C 0 a score=4514870.000000 s hg38.chr2_KI270774v1_alt 50942 552 + 223625 TCCCAGCAGCATGAGA----ACCA-TGTGGGCATTGCACATGCCACTTCCCACGTTGGCAAAACCCAGA-TTT-ATTTTCATAAAATATGTCATCGAAAAT--TCTGAGCGAGTGCCACGT--TTCTCCTCAGGAAGGAAAGGGTCTCCTTTGCAGT-GGGCTGTCATTT--CCTTTTTCCTCCAGTGGGGATCAGAGTGACAGGAGTATTTGAGAAACAGGGATTGGTCAAAATATGTAGGGCAAGGAAATCAACT----TTA------CTTAATATTATAATCTTATTACATATCAATCTTCATGC--TTATA-AATTTATCATACTTTGAATAACAT---ATATAAATATGAATTTTAATTATTTTCCTAATTCATCAAATATTAGCATGCAGTTTAGTTTCCT--------TGTTTCTCATATTGTTTATGACTTCTGAGTAGGGATACTTTACATTT-------TTGTTATTAATGGCAATTGACTGGAGTTGCTTGAA------TTTTTTTTTTAGAGATACAGACTCTAGGTAGAAAAA-TAAG-G--ATTAGGCACTTTCTTGACAAACCTTCAAATAAAGGATGAACATAAAACCATC s panTro5.chr2A 1327840 556 + 111504155 TCCCAGCAGCATGAGA----ACCA-TGCGGGCATTGCACACGCCACTTCCCACGTTGGCAAAACCCAGA-TTT-ATTTTCATAAAATATGTCATCGAAAAT--TCTGAGCGAGTGCCACGT--TTCTCCTCAGGAAGGAAAGGGTCTCCTTTGCAGT-GGGCTGTCATTT--CCTTTTTCCTCCAGTGGGGATCAGAGTGACAGGAGTATTTGAGAAACAGGGATTGGTCAAAATATGTAGGGCAAGGAAATCAACTTTAATTA------CTTAATATTATAATCTTATTACATATCAATCTTCATGC--TTATA-AATTTATCATACATTGAATAACAT---ATATAAATATGAATTTTAATTATTTTCCTAATTCATCAAATATTAGCATGCAGTTTAGTTTCCT--------TGTTTCTCATATTGTTTATGACTTCTGAGTAGGGATACTTTACATTT-------TTGTTATTAATGGCAATTGACTGGAGCTGCTTGAA------TTTTTTTTTTAGAGATACAGACTCTAGGTAGAAAAA-TAAG-G--ATTAGGCACTTTCTTGACAAACCTTCAAATAAAGGATGAACATAAAACCATC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1288573 556 + 114371477 TCCCAGCAGCATGAGA----ACCA-TGTGGGCATTGCACATGCCACTTCCCACGTTGGCAAAACCCAGA-TTT-ATTTTCATAAAATATGTCATCGAAAAT--TCTGAGCGAGTGCCACGT--TTCTCCTCAGGAAGGAAACGGTCTCCTTTGCAGT-GGGCTGTCATTT--CCTTTTTCCTCCAGTGGGGATCAGAGTGACAGGAGTATTTGAGAAACAGGGATTGGTCAAAATATGTAGGGCAAGGAAATCAACTTTAATTA------CTTAATATTATAATCTTATTACATATCAATCTTCATGC--TTATA-AATTTATCATGCATTGAATAACAT---ATATAAATATGAATTTTAATTATTTTCCTAATTCATCAAATATTAGCATGCAGTTTAGTTTCCT--------TGTTTCTCATATTGTTTATGACTTCTGAGTAGGGATACTTTACATTT-------TTGTTATTAATGGCAATTGACTGGAGCTGCTTGAA------TTTTTTTTTTAGAGATACAGACTCTAGGTAGAAAAA-TAAG-G--ATTAGGCACTTTCTTGACAAACCTTCAAATAAAGGATGAACGTAAAACCATC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1313402 560 + 1464242 TCCCAGCAGCGTGAGA----ACCA-TGTGGGCATTGCACACGCCACTTCCCACGTTGGCAAAACCCAGA-TTT-ATTTTCATAAAATATGTCATCGAAAAT--TCGGAGCGAGTGCCACGT--TTCTCCTCAGGAAGGATAGGGTCTCCTTTGCAGT-GGGCTGTCATTT--CCTTTTTCCTCCAGTGGGGATCAGAGTGACAGGCTTATTTGAGGAACAGGGATTGGTCAAAATATGTAGGGCAAAGAAATCAACTTTAATTACTTAATCTTAATATTATAATCTTAATACATATCAATCTTCATGC--TTATA-AATTTATCATACATTGAATAAC-----ATATAAATATGAATTTTAATTATTTTCCTAATTCATCAAATATTAGCATGCAGTTTAGTTTCCT--------TGTTTCTCATATTGTTTATGACTTCTGAGTAGGGATACTTTACATTT-------TTGTTATTAATGGCAATTGACTGGAGTTGCTTGAA------TTTTTTTTTTAGAGATACAGACTCTAGGTAGAAAAA-TAAG-G--ATTAGGCACTTTCTTGACAAACCTTCAAATAAAGGATGAACATAAAACCATC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1044581 556 + 81552678 TCCCAGCAGCATGAGA----ACCA-TGTGGGCATTGCACTCGCCACTTCCCACGTTGGCAAAACCCAGA-TTT-ATTTTTATAAAATATGTCATCGAAAAT--TCTGAGCAAGTGCCACGT--TTCTCCTCAGGAAGGAAAGGGTCTCGTTTGCAGT-GGGCTGTCATTT--CCTTTTTCCTCCAGTGGTGATCAGAGTGACAGGATTATTTGAGAAACAGGGATTGGTCAAAATATGTGGGGCAACGAAATCAACTTTAATTA------CTTAATATTATAATCTTATTACATATCAATCTTCATGC--TTATA-AATTTATCATACATTGAATAACAT---ATATAAATGTGAATTTTAATTATTTTCCTAATTCATCAAATATTAGCATGCAGTTTAGTTTCCT--------TGTTTCTCACATTGTTTATGACTTCTAAGTAGGGATACTTTACGTTT-------TTGTTATTAATGGCAATTGACTGGAGTTGCTTGAA------TTTTTTTTTTAGAGATACAGACTCTAGATAGAAAAA-TAAG-G--ATTAGGCACTTGCTTGACAAACCTTCAAataaaggatgaacataaaaccatc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1372826 553 + 108979918 TCCCAGCAGCATGAGA----ACCG-TGTGGGCATTGCACACGCCACTTCCCAAGTTGGCAAAACCCAGA-TTT-ATTTTCATAAAATATGTCATCACAAAT--TCTGAGCGGGTACCACGT--TTCTCCTCAGGAAGGAAAGGGCCTTCTTTGCAGTGGGGCTGTCACTT--CCCTTCTCCTCCAGTGGGGATCAGAGTGACAGGATTATTTGAGAAACAGGCATTGGTCAAAATATGTGGGGAAAGGAAATCAACTTTAATTC------CTTAATATTATAATCTTATTACATATCAATCTTCATGC--TTATA-AATGTATCATACATTGAATAACAT---ATATAAATGGGAATTTTAATTGTTTCCCTAATTCATCAAATA-TAGCATGCAGTTTAGTTTCCG--------TGTTTCTCAT-TTGTTTATGACTTCTAAGTAGGGATACTTTGTATTT-------TTGTTATTAATGGCAATTGACTAGAGTTACTTGAA------TTTTTTTTTTAGAGATA-GGACTCTAGGTGGAAAAA-TAAG-G--ATTAGGCACTTGCTTGTC-AGCCTTCAAATAAAGGACGAACATAAAACCATC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1345014 554 - 111193037 TCCCAGCAGCATGAGA----ACCG-TGTGGGCATTGCACACGCCACTTCCCAAGTTGGCAAAACCCAGA-TTT-ATTTTCATAAAATATGTCATCACAAAT--TCTGAGCGGGTACCACGT--TTCTCCTCAGGAAGGAAAGGGCCTTCTTTGCAGTGGGGCTGTCACTT--CCCTTCTCCTCCAGTGGGGATCAGAGTGACAGGATTATTTGAGAAACAGGCATTGGTCAAAATATGTGGGGAAAGGAAATCAACTTTAATTC------CTTAATATTATAATCTTATTACATATCAATCTTCATGC--TTATA-AATGTATCATACATTGAATAACAT---ATATAAATGGGAATTTTAAGTGTTTCCCTAATTCATCAAATA-TAGCATGCAGTTTAGTTTCCG--------TGTTTCTCAT-TTGTTTATGACTTCTAAGTAGGGATACTTTGTATTT-------TTGTTATTAATGGCAATTGACTAGAGTTACTTGAA-----TTTTTTTTTTTAGAGATA-GGACTCTAGGTGGAAAAA-TAAG-G--ATTAGGCACTTGCTTGTC-AGCCTTCAAATAAAGGACGAACATAAAACCATC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1373370 553 + 3644372 TCCCAGCAGCATGAGA----ACCG-TGTGGGCATTGCACACACCACTTCCCAAGTTGGCAAAACCCAGA-TTT-ATTTTCATAAAATATGTCATCACAAAT--TCTGAGCAGGTACCACGT--TTCTCCTCAGGAAGGAAAGGGCCTTCTTTGCAGTGGGGCTGTCACTT--CCCTTCTCCTCCAGTGGGGATCAGAGTGACAGGATTATTTGAGAAACAGGCATTGGTCAAAATATGTGGGGAAAGGAAATCAACTTTAATTC------CTTAATATTATAATCTTATTACATATCAATCTTCATGC--TTATA-AATGTATCATACATTGAATAGCAT---ATATAAATGGGAATTTTAATTGTTTCCCTAATTCATCAAATA-TAGCATGCAGTTTAGTTTCCG--------TGTTTCTCAT-TTGTTTATGACTTCTAAGTAGGGATACTTTGTATTT-------TTGTTATTAATGGCAATTGACTAGAGTTACTTGAA------TTTTTTTTTTAGAGATA-GGACTCTAGGTGGAAAAA-TAAG-G--ATTAGGCACTTGCTTGTC-AGCCTTCAAATAAAGGACGAACATAAAACCATC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1327454 555 - 10304083 TCCCAGCAGCATGAGA----ACCG-TGTGGGCATGGCACACGCCACTTCCCAAGTTGGCAAAACCCAGA-TTT-ATTTTCATAAAATATGTCGTCACAAAT--TCTGAGCAGGTACCACGT--TTGTCCTCAGGAAGGAAAGGGTCTTCTTTGCAGTGGGGCTCTCACTT--CCCTTCTCCTCCAGTGGGGATCAGAGTGACAGGATTATTTGAGAAACAGGCATTGGTCAAAATATGTGGGGAAAGGAAATCAACTTTAATTC------CTTAATATTATAATCTTATTACATGTCAATCTTCATGC--TTATA-AATGTATCATACATTGAATAACAT---ATATAAATGGGAATTTTAATTGTTTCCCTAATTCATCAAATA-TAGCATGCAGTTTAGTTTCCG--------TGTTTCTCATATTGTTTATGACTTCTAAGTAGGGATACTTTGTATTT-------TTGTTATTAATGGCAATTGACTGGAGTTACTTGAA------TTTTTTTTTTAGAGATA-GGACTCTAGGTGGAAAAA-TAAG-G--ATTAGGCACTTGCTTGTCAAGCCTTCAAATAAAGGACGAACATAAAACCATC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1398584 555 - 107702431 TCCCAGCAGCATGAGA----ACCG-TGTGGGCATTGCACACACCACTTCCCAAGTTGGCAAAACCCAGA-TTT-ATTTGCATAAAATATGTCATCAGAAAT--TCTGAGCAGGTGCCACGT--TTCTCCTCAGGAAGGCAAGGGTCTCCTTTGCAGT-GGGCTGTCACTT--CCTTTTTCCTCCAGTGGGGATCAGAGTGACAGGATTATTTGAGAAACAGGCATTGGCCAAAATATGTGGGGAAAGGAAATCAACTTTAATTC------CTTAATATTATAATCTTATTACATATCAATCTTCATGC--TTATA-AATTTATCATACATTGAATAACAT---ATATAAATGTGAATTTTAATTGTTTCCCTAATTCATCAAATA-TAGCATGCAGCTTAGTTTCCG--------TGTTTCTCATATTGTTTATGACTTCTAAGTAGGGATACTTTGTATTT-------TTGTTATTAATGGCAATTGACTGGAGTTACTTGAG-----TTTTTTTTTTTAGAGATA-GGACTCTAGGTGGAAAAA-TAAG-G--ATTAGGCACTTGCTTATCAAGCCTTCAAATAAAGGACGAACATAAAACCACC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 876132 556 - 2200435 TCCCAGCAGCATGAGA----ACCG-TGTGGGCGTTGCACACGCCACTTCCCAAGTTGGCAAAACCCAGA-TTT-ATTTTCATAAAATATGTCGTCACAAAT--TCTGAGCAGGTGCCACGT--TTCTCCTCAGGAAGGAAAGGGTCTTCTTTGCAGTGGGGCTGTCACTT--CCCTTCTCCTCCAGTGGGGATCAGAGTGACAGGATTATTTGAGAAACAGGCATTGGTCAAAATATGTGGGGAAAGGAAATCAACTTTAATTC------CTTAATATTATAATCTTATTACATATCAATCTTCATGC--TTATA-AATGTATCATACATTGAATAACAT---ACATAAATGGGAATTTTAATTGTTTCCCTAATTCATCAAATA-TAGCATGCAGTTTAGTTTCCG--------TGTTTCTCATATTGTTTATGACTTCTAAGTAGGGATACTTTGTATTT-------TTGTTATTAATGGCAATTGACTGGAGTTACTTGAA-----TTTTTTTTTTTAGAGATA-GGACTCTAGGTGGAAAAA-TAAG-G--ATTAGGCACTTGCTTGTCAAGCCTTCAAATAAAGGACGAACATAAAACCATC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1314907 551 - 13651311 TCCCAGCAGCATGAGA----ACCA-TGTGGGCATGGCACACGCCACTTCCCAAGTTGGCAAAACTCAGA-TTT-ATTTTCGTAAAATATGTCATCAGAAAT--TCTGAGCAGGTGCCACGT--TTCTCCTCAGGAAGGAAAGGGGCTCCTTTGCAGT-GGGCTGTCACTT--CCTTTTACCTCCAGTGGGGATCAGAGTGACAGGATTATTTGAGAAACAGGCATTGGTCAAAATATGTGGGGAAAGGAAATCAACTTTAATTC------CTTAATATTATAATCTTATTACATATCAATCTTCATGC--TTATA-AATTTATCATACATTGAATAACAT-----ATAAATGTGAATTTTAATTATTTTCCTAATTCATCAAATA-TAGCATGCAGTTTAGTTTCCG--------TGTTTCTCATATTGTTTATGACTTCTAAGTAGGGATACTTTATATTT-------TTGTTATTAATGGCAATTGACTGGAGTTGCTTGAA-------TTTTTTTTTAGAGATA-GGACTCTAGGTGGAAAAA-TAAG-G--ATTAGGCACTTGCTTGTCAAGCCTTCAAATAAAGGACGAACGTAAAACCATC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1324411 554 - 108792865 TCCCAGCAGCATGAGAACCAACCG-TGTGGGCATTGCACACGCCACTTCCCGCCTTGGTAAAACCCAGA-TTT-ATTTTCGTAAAATATGTCATCGGAAAT--CCTGGGCAGTGGCCACGT--TTCTCCTCATGAAGGAAAGGGTCCCCTCTGCAGT-GGACTCTCATTT--CCTTTTTCCTCCGGTGGGGATCAGAGGGACGGGATTATTTCAGAAACAAGCATTGGTCAAAATATATGGGGCAAGGAAATCAACTTTAATTA------CTTAATATTATAACCTTGTTACACATCAATCTTCATAC--TTACA-AATT----ATACATTGAATAACCT---AAACAAATGTGAATTTTAATTATTTTCCTAATTCATCAAATA-TAGCATGCAGTTTAGTTTTCC--------TGTTTCTCATTCTTTTTATGACTTCTAAGTAGGGCTACTTTATATTT-------TTGTTATTAAAGGCAATTGACTGGAGTTGCTTGAA--------TTTTTCTTAGGGGTACAGACTCTAGGTAGACGAAGTAAG-G--ATTAGGCGCTTGCTTGTCAAGACTGCAAACGAAGGACGGACATAAAACAGTC i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1268901 557 + 1864846 TCCCAGCAGCGTGAGAACC-ACCG-TGTGGGCATTGCACACGCCGCTTCCCACATTGGTAAAACCCAGA-TTT-GTTTTCGTAAAATATGTCATCGGAAAT--CCTGAGCAGGTACCACGT--TTCTCCTCACGAAGGAAAGGGTCCCCTTTGCACT-GGGCTCTCATTT--CCTTTTTCCTCCAGAGGGGATCAGAGTGACGGGATTATTTGAGAAACAAGCATTTGTCAAAATATATGGGGCAAGGAAATCAACTTTAATTA------CTTAATGTTATAACCTTATTACATAGCAATCTTCATAC--TTATA-AATTTATCATACATTGAATAACCT---AAACAAATGTGAATTTTAATTATTTTCCTACTTCATCAAATA-GAGCATGCAGTTTAGTTTCCC--------TGTTTTTCATATTTTGTATGACTTCTAAGTAGGGATATTTTTTATTT-------TTGTTATTAAAGGCAATTGACTGGAGTTGCTTGAA--------TTTTTCTTAGGGGTACAGACTCTAGGTAGAAAAAGGAAG-G--ATTAGGCGCTTGCTTGTCAAGACTGCAAACAAAGGACGGACCTAAAACGGTC i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 906782 555 + 5252280 CCTCAGAGGACAGGGG-------G-TGTCGCTGCTGCCCACGCCACTTCCCACGCGGGCAAAAC-CAGA-TTC-ACTTTCATAAAACCTGCAGTAGACAAT--ACTGAAGGCTCTGCATGT--TTTTCCTCAAGAAGGAAAGGATTTTCTTTGAATTTGCGCTGTCACCTGGCCCCTTCTCTCAAGTAAGGAGGAGAGTG--GGGAGCAGCTGAGAAAGGAGGGGCAGGCGAAGTACACCAGACAAGGAAACCAGCTTCGATTA------TTTA---TTTCAGtttt----------aatttttatgtaatcatataatttataata--tGGAATGGTGTATCATTTAAGTGTGAATTTTAATTATTTTCCAAAGTCATCAAAGA-TAGCTTGTGGTTTGGTTTCCTTGTTTCTCTGTTTCTCATATTGTCT----CTGCTAAGAAGAGGCACTTTATATTT-------TTGTTATTAAAAGCAATTAACTAGAGTTCtttaaatttttttttttttttttGGAATTCAGACTAGTGACAAAGAGT-CAAG-ATTATCATGTATTTATTTGCCAACACTTCAAATAAAGGATGGACATAAAGCCATC i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89954134 509 - 120129022 -TCAAACAGCTGGTGA---------TGTA---ACGCCGCAGTCTACTGCTTGCATCAATGAAACCCAAATTTT-ATTTTTGCAAAGTGCCAGGTAGGAGAG----TGAGAAGTCACCATTT--ACCCTTTCTTAAGAGAAATGGGCTTCCCACAGGCAAGTTGGTAACTC--TCCCTTTGCCATGGGTGGGACCAGCAT--TTGGGCTGTAAAGTGAACAGGG--TGAT--AAATGAATAGAGTGAAGAGGG-AATTTGAATTA------TTTAGTTTTATA------------------TTAAATGC--TTACA-TGTTTATTATATATC------------ATTTAAATGTGAATTCTA--TTTTTTCCTAATTAATCAAATA-CAGTACATGCTTTGGTTTCCT--------TGTCTTTCATATTGTTTATAACTTCTAATCTGGGACTTTTCTATTTT-------TTCTTATTAAAAGCAATTTATTGGAATT-CTTGAG-------TTTCCTTTCAGAAGTTCAGGCTGTGGTTAGGAAAA-GGTGTG--ATCATATTCTCTTTTGTCAAGGCTTCTAGAACAGGCTGAACATAAA-CCATC i mm10.chr12 C 0 I 45 s dasNov3.JH576208 1606674 438 + 4416731 TCCAAATAATATAAAA----AGTGATATCAATACTACAGACTCCACTTCCTGCATTGGTAATATCCAGA-TTTCATTCTCCTAAAATACCTAATAGAAAATATATTGAGAGCTCCTCACTTTATTTTCTTCAAGAAAGAAAGGATTGCCTTTGGATT-TGGTTTTAATCTAGCCCTTTTTCTCAAG---GGGTCTGGGTGAAGGGATTATTTGAAAA-----------------------------------------------------ATTAGTG---------------------------------GTATA-AATATATGACA----------------AAGGAAAT------------TATTTTCCAAATTCA--------TAGCTGGTAGTTTAGTTTCCT--------TGTTT-------------------CTAAGTAGGGTCACtttatatttttttttattattaataaaaacaatttaatGGAATCCTTTGAA-------TTTTCTTTTAGGAATGCAGGCTGTACTTAGGAAAAGTCAA-G--ATTATGTACTCATTTCTCAAGACTGCAAGTAAAGAGAGAACATAAAACCATC i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1176366 2882 - 7082604 M a score=517608.000000 s hg38.chr2_KI270774v1_alt 51494 64 + 223625 AATCTAT-AAGTATAGGAAAGTAAG-------AAACAGATGCCTTCTCCTGCAG-TTCTATTGAAAAGAAAAT s panTro5.chr2A 1328396 64 + 111504155 AATCTAT-AAGTATAGGAAAGTAAG-------AAACAGATGCCTTCTCCTGCAG-TTCTATTGAAAAGAAAAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1289129 64 + 114371477 AATCTAT-AAGTATAGGAAAGTAAG-------AAACAGATGCCTTCTCCTGCAG-TTCTATTGAAAAGAAAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1313962 64 + 1464242 AATCTAT-AAGTATAGGAAAGTAAG-------AAACAGATGCCTTCTCCTGCAG-TTCTATTGAAAAGAAAAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1045137 65 + 81552678 aatctataaagcataGGAAAGTAAG-------AAACAGAGGCCTGCTCCTGCAG-TTCTATTGAAAAGAAAAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1373379 70 + 108979918 AATCTACAAAGTATAGGAAAGTAAG--AAAATAAACAGATGCCTGCTTCTGCAG-TTCTGTTGAAAAGAAAAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1345568 70 - 111193037 AATCTACAAAGTATAGGAAAGGAAG--AAAATAAACAGATGCCTGCTTCTGCAG-TTGTGTTGAAAAGAAAAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1373923 70 + 3644372 AATCTACAAAGTATAGGAAAGTAAG--AAAATAAACAGATGCCTGCTTCTGCAG-TTCTGTTGAAAAGAAAAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1328009 70 - 10304083 AATCTACAAAGTATAGGAAAGTAAG--AAAATAAACAGATGCCTGCTTCTGCAG-TTCTGTTGAAAAGAAAAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1399139 70 - 107702431 AATCTACAAAGTATAGGAAAGTAAG--AAAATAAACAGATGCCTGCTTCTGCAG-TTCTGTTGAAAAGAAAAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 876688 70 - 2200435 AATCTACAAAGTATAGGAAAGTAAG--AAAATAAACAGATGCCTGCTTCTGCAG-TTCTGTTGAAAAGAAAAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1315458 70 - 13651311 AATCTACAAAGTATAGGAAAGTAAG--AAAATAAACAGATGCCTGCTTCTGCAG-TTCTGTTGAAAAGAAAAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1324965 70 - 108792865 AATCTGTGAAGTAGAGGAAAGTGAG--GAAATAAACAGAAGTCTGCTCCTGCAG-TTCTGTGGAAAAGAAAAT i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1269458 70 + 1864846 AATCTGTGCAGTAGAGGAAAGTAAG--GAAATAAACAGATGCCTGCTCCTGCAG-TTCTGTGGAAAAGAAAAT i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 907337 67 + 5252280 AGCCCACAAAGTACAGGAATACAAG--AACATAAACAGGTG----CTCTCACAGCTTCTATTGGAAACTAAAT i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1607112 65 + 4416731 AGACTGTAAAGGACAGGAAAATAATTCTAAGAAAATAGATG-------CTATAC-TTTTATCGGAAAGCAAAT i dasNov3.JH576208 C 0 I 19 e mm10.chr12 89954643 45 - 120129022 I e saiBol1.JH378218 1176366 2882 - 7082604 M a score=79202.000000 s hg38.chr2_KI270774v1_alt 51558 11 + 223625 GTGggccaggc s panTro5.chr2A 1328460 11 + 111504155 GTGggccaggc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1289193 11 + 114371477 GTGggccaggc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1314026 11 + 1464242 GTGggccaggc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1045202 11 + 81552678 GTGggccaggc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1373449 11 + 108979918 GTGggccaggt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1345638 11 - 111193037 GTGggccaggt i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1373993 11 + 3644372 GTGggccaggt i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1328079 11 - 10304083 GTGggccaggt i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1399209 11 - 107702431 GTGggccaggc i chlSab2.chr14 C 0 I 270 s manLeu1.NW_012103754v1 876758 11 - 2200435 GTGggccaggt i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1315528 11 - 13651311 GTGggccaggc i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1325035 11 - 108792865 GCGggccaggc i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1269528 11 + 1864846 GCAAgccaggc i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 907404 2 + 5252280 GT--------- i otoGar3.GL873658 C 0 C 0 e mm10.chr12 89954643 45 - 120129022 I e saiBol1.JH378218 1176366 2882 - 7082604 M e dasNov3.JH576208 1607177 19 + 4416731 I a score=684906.000000 s hg38.chr2_KI270774v1_alt 51569 93 + 223625 ctggtggctcatgcatgtaatcctagcactttgggaagttgaagcgggtggatcacttgaggttaggggttcaagagcagcctggccaacatg s panTro5.chr2A 1328471 93 + 111504155 ctggtggctcatgcatgtaatcctagcactttgggaagttgaagcgggtggatcacttgaggttaggggttcaagagcagcctggccaacatg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1289204 93 + 114371477 ctggtggctcatgcatgtaatcctagcactttgggaagttgaagcgggtggatcacttgaggttaggggttcaagagcagcctggccaacatg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1314037 93 + 1464242 ctggtggctcattcatgtaatcctagcactttgggaagttgaagcgggtggatcacttgaggtcaggggttcaagagcagcctggccaacatg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1045213 93 + 81552678 ctggtggctcatgcatgtaatcctagcactttgggaagttgaagcgggtggatcacttgaggtcagggcttcaagaccagcctggccaacatg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1373460 93 + 108979918 gtggtggctcatgcatgtaatcctagcactttgggaagttgaagtgggtagatcacttgaggtcaggagttcaagactagcctggccaatatg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1345649 93 - 111193037 gtggtggctcatgcatgtaatcctagcactttgggaagttgaagtgggtagatcacttgaggtcaggagttcaagactagcctggccaatatg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1374004 93 + 3644372 gtggtggctcatgcatgtaatcctagcactttgggaagttgaagtgggtagatcacttgaggtcaggagttcaagactagcctggccaatatg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1328090 93 - 10304083 gtggtggctcctgcatgtaatcctagcactttgggaagttgaagtgggtaggtcacttgaggtcaggagttcaagactagcctggtcaacatg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1399490 93 - 107702431 gtggtggctcatgcatgtaatcctagcactttgggaagttgaagcaggtggatcacttgaggtcaggagttcaagactagcctggccaacatg i chlSab2.chr14 I 270 C 0 s manLeu1.NW_012103754v1 876769 93 - 2200435 gtggtggctcatgcatgtaatcctagcactttgggaagttgaagtgggtagatcacttgaggtcaggagttcaagactagcctggccaacatg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1315539 93 - 13651311 gtggtggctcatgcatgtaatcctagcactttgggaagttgaagcgggtgggtcatttgaggtcaggagttcaagactagcctggtcaacatg i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1325046 93 - 108792865 gtggtggctcctgcctgtaatcctggtaccttgggaggttgaagcgggtggatcacttgaggtcaggagttcaaggccagcctggccgatatg i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1269539 93 + 1864846 gtggtggctcatgcctgtaatcctagtactttggtaggttgaagcgggtggatcacttgaggtcaggagttcaaggccagcctggccgatatg i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 907406 9 + 5252280 ------------------------------------------------------------------------------------GCAAACACG i otoGar3.GL873658 C 0 C 0 e mm10.chr12 89954643 45 - 120129022 I e saiBol1.JH378218 1176366 2882 - 7082604 M e dasNov3.JH576208 1607177 19 + 4416731 I a score=638587.000000 s hg38.chr2_KI270774v1_alt 51662 82 + 223625 gcaaaaccctgtctgtactaagaatacaaaaattaactgggcatggtggtggacacctgtaatcccagctactcaggaggc-t s panTro5.chr2A 1328564 82 + 111504155 gcaaaaccctgtctgtactaagaatacaaaaattaactgggcatggtggtggacacctgtaatcccagctactcaggaggc-t i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1289297 82 + 114371477 gcaaaaccctgtctgtactaagaatacaaaaattaactgggcatggtggtggacacctgtaatcccagctactcaggaggc-t i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1314130 82 + 1464242 gcaaaaccctgtctgcactaagaatacaaaaattaactgggcatggtggcggacacctgtaatcccagctactcaggaggc-t i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1045306 82 + 81552678 gcaaaaccctgtctgtactaagaatataaaaattaactgggcatggtggtagacacctgtaatcccagctactcaggaggc-t i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1373553 82 + 108979918 gcaaaaccctgtctgtactaagaatacaaatattaactgggcatggtggcagacgcctgtaatcccagctactcaggaggc-t i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1345742 82 - 111193037 gcaaaaccctgtctgtactaagaatacaaatattaactgggcatggtggcagacgcctgtaatcccagctactcaggaggc-t i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1374097 82 + 3644372 gcaaaaccctgtctgtactaagaatacaaatattaactgggcatggtggcagacgcctgtaatcccagctactcaggaggc-t i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1328183 82 - 10304083 gcaaaaccctgtctgtactaagaatacaaatattaactgggcatggtggcagacgcctgtaatcccagctactcaggaggc-t i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1399583 82 - 107702431 gcaaaaccctctctgtactaagaatacaaatattaactgggcatggtggcagatgcctgtaatcccagctactcaggaggc-t i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 876862 82 - 2200435 gcaaaaccctgtctgtactaagaatacaaatattaactgggcatggtggcagacgcctgtaatcccagctactcaggaggc-t i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1315632 82 - 13651311 gcaaaaccctgtctgtactaagaatacaaatattaactgggcatggtggcagacgcctgtaatcccagctactcaggaggc-t i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1325139 82 - 108792865 gcaaaaccccgcctctactaagaatacaaaacttagctgggcgtggtggcaggcacctgcaacccccgctactcaggaggc-t i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1269632 83 + 1864846 gcaaaaccctgtctctaccaagaatacaaaaattagctgggcgtggtggcacgcacctgtaaccccagctactcaggaggctt i cebCap1.NW_016107827v1 C 0 C 0 e mm10.chr12 89954643 45 - 120129022 I e saiBol1.JH378218 1176366 2882 - 7082604 M e otoGar3.GL873658 907415 0 + 5252280 C e dasNov3.JH576208 1607177 19 + 4416731 I a score=648571.000000 s hg38.chr2_KI270774v1_alt 51744 125 + 223625 gaagcaga-agaattgcttgtacctggagggtggagattgcactgagccgagattgcaccactgtactccagcctgggcaacagagcaagactctgtctcaaa----------------------aaaaaaaaaaaaaaaaaaa--------------------GTGC s panTro5.chr2A 1328646 121 + 111504155 gaagcaga-agaattgcttgtacctggagggtggagattgcactgagctgatattgcaccactgtactccagcctgggcaacagagcaagactctgtctc--------------------------aaaaaaaaaaaaaaaaaa--------------------GTGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1289379 118 + 114371477 gaagcaga-agaattgcttgtacctggagggtggagattgcactgagctgagattgcaccactgtactccagcctgggcaacagagcaagactctgtctc-----------------------------aaaaaaaaaaaaaaa--------------------GTGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1314212 105 + 1464242 gaagcaga-agaattgcttgtacctggagggtggag----------------attgcaccactgtactccagcctgggcaacagagcaagactctgtctc--------------------------aaaaaaaaaaaaaaaaaa--------------------GTGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1045388 112 + 81552678 gaagcaga-agaattgcttgtacctggagggtggagattgcactgagccgagattgcgccactgcactccagcctgggcaacagagcaaga--ctgtctc---------------------------------caaaaaaaaaa--------------------GTGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1373635 133 + 108979918 gaggcaga-agaatcgcttgtacctgaggggtggatattgcactgagccgagactgcgtcactgcactccagcctgggcaacagaacaagactccgtctc--------------------------acaaaaaaaaaaa-aaaG-------AGAGAGAGAGAGAGTAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1345824 133 - 111193037 gaggcaga-agaatcgcttgtacctgaggggtggatattgcactgagccgagactgcgtcactgcactccagcctgggcaacagaacaagactccgtctc--------------------------acaaaaaaaaaaa-aaaG-------AGAGAGAGAGAGAGTAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1374179 127 + 3644372 gaggcaga-agaatcgcttgtacctgaggggtggatattgcactgagccgagactgcgtcactgcactccagcctgggcaacagaacaagactccgtctc--------------------------acaaaaaaaaaaa--------------aGAGAGAGAGAGTAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1328265 134 - 10304083 gaggcaga-agaatcgcttgtacctgaggggtggatattgcactgagccgagactgcgtctctgcactctagcctgggcaacagaacaagactccgtctc--------------------------acaaaaaaaaaaaaaaaa-------aGAGAGAGAGAGAGTAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1399665 141 - 107702431 gaggcaga-agaatcgcttgtacgtgaggggtggatattgcactgagccgagactgcatcactgcactctagcctgggcaacagaacaagactccgtctc--------------------------acaaaaaaaaaaaaaaaaaaaaaaGAGAGAGAGAGAGAGTAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 876944 134 - 2200435 gaggcaga-agaattgcttgtacctgaggggtggatattgcactgagccgagactgcgtcactgcactctagcctgggcaacagaacaagactccgtctc--------------------------acaaaaaaaaaaaaaaaa-------aGAGAGAGAGAGAGTAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1315714 128 - 13651311 aaggcaga-agaatcgcttgtacctggggggtgaatattgcactgagccgagactgcgccactgcactccagcctgggcaacagaacaagactccg-ctc--------------------------acaaaaaaaaaaaaagaa-------aga-----acaaaGTAC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1325221 114 - 108792865 gaggcagg-agagtggcttgaacctggtgagcagaggttgcactgagccaagactgggctgctgcactccagcct-ggcaacagagcaagactccatctc--------------------------------aaagaataaaaa--------------------GTGC i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1269715 138 + 1864846 gaggcagg-agaatcgcttaaacctggtgagcagaggttgcattgagccaagattggg--------ctccagcct-ggcaacagagcaagactccatctcaaaaaaaannnnnnnnnnnnnnnnnaaaaaaaaaaaaaaaaaaa--------------------GTGC i cebCap1.NW_016107827v1 C 0 C 0 s mm10.chr12 89954688 30 - 120129022 GAAGCAGAGAGAAACACC----ACTGAGGGCTAG-------------------------------------------------------------------------------------------------------------------------------------- i mm10.chr12 I 45 C 0 e saiBol1.JH378218 1176366 2882 - 7082604 M e otoGar3.GL873658 907415 0 + 5252280 C e dasNov3.JH576208 1607177 19 + 4416731 I a score=94722.000000 s hg38.chr2_KI270774v1_alt 51869 16 + 223625 AGATGCT----AAAGGTTCC s panTro5.chr2A 1328767 16 + 111504155 AGATGCT----AAAGGTTCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1289497 16 + 114371477 AGATGCT----AAAGGTTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1314317 16 + 1464242 AGATGCT----AAAGCTTCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1045500 16 + 81552678 AGATGCT----AAAGGTTCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1373768 20 + 108979918 AGATGCTAAAGAAAGATTCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1345957 20 - 111193037 AGATGCTAAAGAAAGATTCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1374306 20 + 3644372 AGATGCTAAAGAAAGATTCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1328399 20 - 10304083 AGATGCTAAAGAAAGGTTCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1399806 20 - 107702431 AGATGCTAAAGAAAGGTTCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 877078 20 - 2200435 AGATGCTAAAGAAAGGTTCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1315842 20 - 13651311 AGATGCTAAAGAAAGGTTCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1325335 16 - 108792865 AGCTGGT----AAAGTTTCC i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1269853 16 + 1864846 AGATGGT----AAAGTTTCC i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 907415 9 + 5252280 -----------AAAGGTTTG i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89954718 2 - 120129022 ------------------CT i mm10.chr12 C 0 C 0 e saiBol1.JH378218 1176366 2882 - 7082604 M e dasNov3.JH576208 1607177 19 + 4416731 I a score=1021606.000000 s hg38.chr2_KI270774v1_alt 51885 120 + 223625 ATG-TTCCATTTCATGAGGTGATGAA-GATCTCAGCAAAAATCCATAGCTCCCCACATTGCACCCGCCCCTTGTCTATCTGACATTAGGAGGAGGGAAATA-TTT-------TAATATACCAAATATTTA s panTro5.chr2A 1328783 120 + 111504155 ATG-TTCCATTTCATGAGGTGATGAA-GATCTCAGCAAAAATCCATAGCTCCCCACATTGCACCTGCCCCTTGTCTATCTGACATTAGGAGGAGGGAAATA-TTT-------TAATATACCAAATATTTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1289513 120 + 114371477 ATG-TTCCATTTCATGAGGTGATGAA-GATCTCAGCAAAAATCCATAGCTCCCCACATTGTACCCGCCCCTTGTCTATCTGACATTAGGAGGAGGGAAATA-TTT-------TAATATACCAAATATTTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1314333 119 + 1464242 ATG-TTCCATTTCATGAGGTGATGAA-GATCTCAGCAAAAATCCATAGCTCCCCACATTGCACCCG-CCCTTGTCTATCTGACATTAGGAGGAGGGAAATA-TTT-------TAATACACCAAATATTTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1045516 120 + 81552678 ATG-TTCCATTTCATGAGGTGATGAA-GATCTCAGCAAAAATCCATAGCTCCCCACATTGCACCCGCCCCTTGTCTATCTGACGTTAGGAGGAGGGAAATA-TTT-------TAATATACCAAATATTTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1373788 121 + 108979918 ATATTTCCATTTCATGAGGTGATGAA-GATCTCAGCAAAAATCCACAGCTCCCCACATTACACCCACCCCTTGTCTGTCTGACATTAGGACGAGGGAAATA-TTT-------TAATATACCAAATATTTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1345977 121 - 111193037 ATATTTCCATTTCATGAGGTGATGAA-GATCTCAGCAAAAATCCACAGCTCCCCACATTACACCCACCCCTTGTCTGTCTGACATTAGGAAGAGGGAAATA-TTT-------TAATATACCAAATATTTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1374326 121 + 3644372 ATATTTCCATTTCATGAGGTGATGAA-GATCTCAGCAAAAATCCACAGCTCCCCACATTACACCCACCCCTTGTCTGTCTGACATTAGGAAGAGGGAAATA-TTT-------TAATATACCAAATATTTA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1328419 121 - 10304083 ATATTTCCATTTCATGAGGTGATGAA-GATCTCAGCAAAAATCCACAGCTCCCCGCATTACACCCACCCCTTGTCTGTCTGACATTAGGAAGAGGGAAATA-TTT-------TAATATACCAAATATTTA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1399826 118 - 107702431 ATATTTCCATTTCATGAGGTGATGAA-GATCTCAGCAAAAATCCACAGCTCCCCACATTACACCCACCCCTTGTCTGTCTGACATTAGGAAGAGGGAAATA-TT----------ATATACCAAATATTTA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 877098 121 - 2200435 ATATTTCCATTTCATGAGGTGATGAA-GATCTTAGCAAAAATCCACGGCTCCCCGCATTACACCCACCCCTTGTCTGTCTGACATTAGGAAGAGGGAAATA-TTT-------TAATATACCAAATATTTA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1315862 121 - 13651311 ATATTTCCATTTCATGAGGTGATGAA-GATCTCAGCAAAAATCCACAGCCCCCCACATTGCAGCCACCCCTTGTCTATCTGACGTTAGGAAGAGGGAAATA-TTT-------TAATATACCAGATACTTA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1325351 119 - 108792865 ATG-TTCCATTCCACAAGATGATGAA-GGTTCCAGCAGCAATCCACAGCT-CCCACGTTGCACCTGCCCCTTGTCTATCTGACATTAGGCGGAAGGAAATA-CTT-------TAATATGCCGAATATTTA i calJac3.chr14 C 0 I 5 s cebCap1.NW_016107827v1 1269869 120 + 1864846 ATG-TTCCATTCCACAAGATGATGAA-GATTTCAGCAAAAATCCACAGCTCCCCACATTGCACCTGCCCCTTGTCTATCTGACATTAGGCAGAAGGAAATA-TTT-------TAATATGCCAAATATTTA i cebCap1.NW_016107827v1 C 0 I 13 s otoGar3.GL873658 907424 108 + 5252280 ATG------TTCCATGAGGCAAGTAA-GATTTTAGCAAGAGTTT-CAGCTCCATCC------CCCACTCCTTATTTATCTAATATTAGGAGGAAGGAAATA-TTT-------TAGTATACCAAATATTTA i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89954720 116 - 120129022 ATC-CTTCAGATCTTGAAGCAATGAAGGATTTTGGCAATCAGCCACAGTTCCTTGACTGTCATCCG-CCCATATTTATCTGATATCTGGGGGAAGGATATAGTTT-------TAACCTATCAAAC----- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1607196 119 + 4416731 ------ATATTCCATGATGTGATGTA-GGCTTCAGTAATTATTAGTAGTT-CTTGTAATCTACCCACACCTTGATTATATAC--TTAAGAGGAAGTAAACA-TTTTGATTTATAATTTATCAAATATTTA i dasNov3.JH576208 I 19 C 0 e saiBol1.JH378218 1176366 2882 - 7082604 M a score=79338.000000 s hg38.chr2_KI270774v1_alt 52005 10 + 223625 CAACCAATAG s panTro5.chr2A 1328903 10 + 111504155 CAACCAATAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1289633 10 + 114371477 CAACCAATAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1314452 10 + 1464242 CAACCAATAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1045636 10 + 81552678 CAACCAATAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1373909 10 + 108979918 CAACCAATAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1346098 10 - 111193037 CAACCAATAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1374447 10 + 3644372 CAACCAATAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1328540 10 - 10304083 CAACCAATAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1399944 10 - 107702431 CAACCAATAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 877219 10 - 2200435 CAACCAATAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1315983 10 - 13651311 CAACCAATAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1325475 8 - 108792865 CAA--AATAG i calJac3.chr14 I 5 I 1 s otoGar3.GL873658 907532 10 + 5252280 TAATCAATGG i otoGar3.GL873658 C 0 I 1 s mm10.chr12 89954836 4 - 120129022 ------ATAG i mm10.chr12 C 0 I 5 s dasNov3.JH576208 1607315 10 + 4416731 TAATCAGTTG i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1176366 2882 - 7082604 M e cebCap1.NW_016107827v1 1269989 13 + 1864846 I a score=4467316.000000 s hg38.chr2_KI270774v1_alt 52015 539 + 223625 TTTTATGTGTTTGAAAGTATA---TCC---TTTTTAGAAGAGGTACATC-----TCTATATAA-TAAATATTGCATGTGCTAT----------------GACGT----------TTTGATGGCTTCTGTGG-------AAGACTCCAGTAGGGAGCAGAGTATTTCAAGTGAA-TTTAAAATAATATTCTGCCCCATGAATGTTGTTCTTGGGGCGTCAGACAGTATTTTTCTGTCTCGGTGTTCATTCTCTGGCTTTAATTCAAACTTCCTATTAAT--ACT--AATAGCAATAGGAGTTAGAATTGTACAAAATATATAAAACCCAAAAAAGGTAAAGGTAGAA------ATTTTCCTTTCACCAGTTCGCCTTCCAGTGTGGATATTTTGATCTGCAAAATGAACAGACACTCATTTTCTTCCCTTT--------------------------------------------------------------TG-CCAAAAAGCCTAAACCCGCCCAAAAATAGAACGTGTTCTTCTGCACCAAGGAGGGAAGAAACTGGGAAGATTTTTGTTTTTGT-------AAAAAAAT---AA----TTTTAGAAAA----------------------TAAAC-----------------------------------------------------------------CTTTACTATATAATAATGAAAAAAATAAGATTTTCCCAGGAAGATTTGATACTAA s panTro5.chr2A 1328913 539 + 111504155 TTTTATGTGTTTGAAAGTATA---TCC---TTTTTAGAAGAGGTACATC-----TCTATATAA-TAAATATTGCATGTGCTAT----------------GACGT----------TTTGATGGCTTCTGTGG-------AAGACTCCAGTAGGGAGCAGAGTATTTCAAGTGAA-TTTAAAATAATATTCTGCCCTGTGAATGTTGTTCTTGGGGCGTCAGACAGTATTTTTCTGTCTTGGTGTTCATTCTCTGGCTTTAATTCAAACTTCCTATTAAT--ACT--AATAGCAATAGGAGTTAGAATTGTACAAAATATATAAAACCCAAAAAAGGTAAAGGTAGAA------ATTTTCCTTTCACCAGTTCGCCTTCCAGTGTGGATATTTTGATCTGCAAAATGAACAGACGCTCATTTTCTTCCCTTT--------------------------------------------------------------TG-CCAAAAAGCCTAAACCCGCCCAAAAATAGAACGTGTTCTTCTGCACCAAGGAGGGAAGAAACTGGGAAGATTTTTGTTTTTGT-------AAAAAAAT---AA----TTTTAGAAAA----------------------TAAAC-----------------------------------------------------------------CTTTACTATATAATAATGAAAAAAATAAGATTTTCCCAGGAAGATTTGATACTAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1289643 537 + 114371477 TTTTATGTGTTTGAAAGTATA---TCC---TTTTTAGAAGAGGTACATC-----TCTATATAA-TAAATATTGCATGTGCTAT----------------GACGT----------TTTGATGGCTTCTGTGG-------AAGACTCCAGTAGGGAGCAGAGTATTTCAAGTGAA-TTTAAAATAATATTCTGCCCTGTGAATGTTGTTCTTGGGGCGTCAGACAGTATTTTTCTGTCTTGGTGTTCATTCTCTGGCTTTAATTCAAACTTCCTATTAAT--ACT--AATAGCAATAGGAGTTAGAATTGTACAAAATATATAAAACCCAAAAAAGGTAAAGGTAGAA------ATTTTCCTTTCACCAGTTCGCCTTCCAGTGTGGATATTTTGATCTGCAAAATGAACAGACGCTCATTTTCTTCCCTTT--------------------------------------------------------------TG-CCAAAAAGCCTAAACCCGCCCAAAAATAGAACGTGTTCTTCTGCACCAAGGAGGGAAGAAACTGGGAAGATTTT--GTTTTGT-------AAAAAAAT---AA----TTTTAGAAAA----------------------TAAAC-----------------------------------------------------------------CTTTACTATATAATAATGAAAAAAATAAGATTTTCCCAGGAAGATTTGATACTAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1314462 538 + 1464242 TTTTATGTGTTTGAAAGTATA---TCC---TTTTTAGAAGATGTACATC-----TCTATATAA-TAAATATTGCATGTACTAT----------------GACGT----------TTTGATGGCTTCTGTGG-------AAGACTTCAGTAGGGAGCAGAGTATTTCAAGTGAA-TTTAAAATAATATTCTGCCCCGTGAATGTTGTTCTTGGGGCGTCAGACAGTATTTTTCTGTCTCAGTGTTCATTCTCTAGCTTTAATTCAAACTTCCTATTAAT--ACT--AATAGCAATAGGAGTTAGAATTGTACAAAATATAT-AAACCCAAAAAAGGTAAAGGTAGAA------ATTTTCCTTTCACCAGTTCGCCTTCCAGTGTGGATATTTTGATCTGCAAAATGAACAGATGCTCATTTTCTTCCCTTT--------------------------------------------------------------TG-CCAAAAAGCCTAAACCCGCCCAAAAATAGAACATGTTCTTCTGCACCAAGGAGGCAAGAAACTGGGAAGATTTTTGTTTTTGT-------AAAAAAAT---AA----TTTTAGAAAA----------------------TAAAC-----------------------------------------------------------------CTTTACTATATAATAATGAAAAAAATAAGATTTTCCCAGGAAGATTTGATACTAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1045646 539 + 81552678 TTTTATGTGTTTGAAAGTATA---TCC---TTTTTAGAAGATGTACATC-----TCTATATAA-TAAATATTGCATGTACTATG---------------GACAT----------TTTGATGGCTTCTGTGG-------AAGACTCTAGCAGGGAGCAGAGTATTTCAAGTGAA-TTTAAAATAATATTCTGCCCTGTGAATGTTGTTCTTGGGGCATCAGACAGTATTTTTCTGTCTCAGTGTTCATTCTCTGGCTTTAATTCAAACTTCCTATTAAT--ACT--AATAGCAATAGGAGTTAGAATTGTACAAAATATATAAAATCCGAAAAAGGTAAAGGTAGAA------ATTTTCCTTTCACCAGTTCCCCTTCCAGTGTGGATATTTTGATCTGCAAAATGAACAGATGCTCATTTTCTTCCCTTT--------------------------------------------------------------TG-CCAAAAAGCCTAAAAGCACCCAAAAATAGAACGTGTTCTTCTGCACCAAGGAAGGAAGAAACTGGGAAGATTTTTGTTTTTGT-------AAAAAAAT---GA----TTTTAGAAAA----------------------TAAAC-----------------------------------------------------------------CTTTACTATATAATAATGAAAAAAATAAGATTTTCCCAGGAAGatttgata-tga i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1373919 535 + 108979918 TTTTATGTGCTTGAAAGTATA---TTC---TTTTTAGAAGATGTACATC-----TCTATATAA-TAAATATTGTGTGTACTATG---------------GACAT----------TTTGATGGCTTCTGTGG-------AAGACTCCAGCAAGGAGCAGAGTATTTCAAATGAA-TTTAAAGTAATATTCTGCCCCGTGAATGTGATTCATGGGGCATCAGACAGTATTTTTCGGTCTCAGTGTTCATTCTCTGGCTTTAACTCAAACTTCCTGTTAAT--ATT--AATAGCAATAGGAGTCAGAATTTTACAAAATATATAAAACCCAAAAA-GGTAAAGGTAGAA------ATTTTCCTTTCACCAGTTTCCCTTCCA-TGTGGATATTTTGATCTGCAAAATGAACAGATGCTCATTTTCTTCCCTTT--------------------------------------------------------------CG-CCAAAAAGCCTAAACCCACCA-AAAATAGAACGTGTTCTTCTGCACCACGGAGGGAAGAAGCTGGGAAGATTTTTGTTTTTGT--------AAAAAAT---AA----TTCTA-AAAA----------------------TTAAC-----------------------------------------------------------------CTTTACTATATAATAATGAAAAAACTAAGATTTTCCCAGGAAGATTTGATACTAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1346108 535 - 111193037 TTTTATGTGCTTGAAAGTATA---TTC---TTTTTAGAAGATGTACATC-----TCTATATAA-TAAATATTGCGTGTACTATG---------------GACAT----------TTTGATGGCTTCTGTGA-------AAGACTCCAGCAAGGAGCAGAGTATTTCAAATGAA-TTTAAAGTAATATTCTGCCCCGTGAATGTGATTCATGGGGCATCAGACAGTATTTTTCGGTCTCAGTGTTCATTCTCTGGCTTTAACTCAAATTTCCTGTTAAT--ATT--AATAGCAATAGGAGTCAGAATTTTACAAAATATATAAAACCCAAAAA-GGTAAAGGTAGAA------ATTTTCCTTTCACCAGTTTCCCTTCCA-TGTGGATATTTTGATCTGCAAAATGAACAGATGCTCATTTTCTTCCCTTT--------------------------------------------------------------CG-CCAAAAAGCCTAAACCCACCC-AAAATAGAACGTGTTCTTCTGCACCACGGAGGGAAGAAGCTGGGAAGATTTTTGTTTTTGT--------AAAAAAT---AA----TTCTA-AAAA----------------------TTAAC-----------------------------------------------------------------CTTTACTATATAATAATGAAAAAACTAAGATTTTCCCAGGAAGATTTGATACTAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1374457 536 + 3644372 TTTTATGTGCTTGAAAGTATA---TTC---CTTTTAGAAGATGTACATC-----TCTATATAA-TAAATATTGCGTGTACTATG---------------GACAT----------TTTGATGGCTTCTGTGG-------AAGACTCCAGCAAGGAGCAGAGTATTTCAAATGAA-TTTAAAGTAATATTCTGCCCCGTGAATGTGATTCATGGGGCATCAGACAGTATTTTTCGGTCTCAGTGTTCATTCTCTGGCTTTAACTCAAACTTCCTGTTAAT--ATT--AATAGCAATAGGAGTCAGAATTTTACAAAATATATAAAACCCAAAAA-GGTAAAGGTAGAA------ATTTTCCTTTCACCAGTTTCCCTTCCA-TGTGGATATTTTGATCTGCAAAATGAACAGATGCTCATTTTCTTCCCTTT--------------------------------------------------------------CG-CCAAAAAGCCTAAACCCACCCAAAAATAGAACGTGTTCTTCTGCACCAAGGAGGGAAGAAGCTGGGAAGATTTTTGTTTTTGT--------AAAAAAT---AA----TTCTA-AAAA----------------------TTAAC-----------------------------------------------------------------CTTTACTATATAATAATGAAAAAACTAAGATTTTCCCAGGAAGATTTGATACTAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1328550 536 - 10304083 TTTTATGTGCTTGAAAGTATA---TCC---TTTTTAGAAGATGTACATC-----TCTATATAA-TAAATATTGCGTGTACTATG---------------GACAT----------TTTGATGGCTTCTGTGG-------AAGACTCCAGCAAGGAGCAGAGTATTTCAAATGAA-TTTAAAGTAATATTCTGCCCCGTGAATGTGATTCATGGGGCATCAGACAGTATTTTTCGGTCTCAGTGTTCATTCTCTGGCTTTAACTCAAACTTCCTGTTAAT--ATT--AATAGCAATAGGAGTCAGAATTTTACAAAATATATAAAACCCAAAAA-GGTAAAGGTAGAA------ATTTTCCTTTCACCAGTTTCCCTTCCA-TGTGGATATTTTGATCTGCAAAATGAACAGATGCTCATTTTCTTCCCTTT--------------------------------------------------------------CG-CCAAAAAGCCTAAACCCACCCAAAAATAGAACGTGTTCTTCTGCACCAAGGAGGGAAGAAGCTGGGAAGATTTTTGTTTTTGT--------AAAAAAT---AA----TTCTA-AAAA----------------------TTAAC-----------------------------------------------------------------CTTTACTATATAATAATGAAAAAAATAAGATTTTCCCAGGAAGATTTGATACTAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1399954 530 - 107702431 TTTTATGTGCCTGAAAGTATA---TCC---TTTTTAGAAGATGTACATC-----TCTATATAA-TAAATATTGCATGTACTATG---------------GACAT----------TTTGATGGCTTCTGTGG-------AAGACTCCAGCAAGGAGCAGAGTATTTCAAATGAA-TTTAAAATAATATTCTGCCCCGTGATTGTGATTCATGGGGCATCAGACAGTATTTTTCGGTCTCAGTGTTCATTCTCTGGCTTTAACTCAAATTTCCTG--------TT--AATAGCAATAGGAGTCAGAATTTTACAAAATATATAAAACCCAAAAA-GGTAAAGGTAGAA------ATTTTCCTTTCACCAGTTTCCCTTCCA-TGTGGATATTTTGATCTGCAAAATGAACAGATGCTCATTTTCTTCCCTTT--------------------------------------------------------------CG-CCAAAAAGCCTAAACCCACCCAAAAATAGAACGTGTTCTTCTGCACCAAGGAGGGAAGAAGCTGGGAAGATTTTTGTTTTTGT--------AAAAAAT---AA----TTCTA-AAAA----------------------TTAAC-----------------------------------------------------------------CTTTACTATATAATAATGAAAAAAATAAGATTTTCCCAGGAAGATTTGATACTAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 877229 527 - 2200435 TTTTATGTGCTTGAAAGTATA---TCC---TTTTTAGAAGATGTACATC-----TCTATATAA-TAAATATTGCGTGTACTATG---------------GACAT----------TTTGATGGCTTCTGTGG-------AAGACTCCAGCAAGGAGCAGAGTATTTCAAATGAA-TTTAAAGTAATATTCTGCCCCGTGAATGTGATTCATGGGGCATCAGACAGTATTTTTCGGTCTCAGTGTTCATTCTCTGGCTTTAACTCAAACTTCCTGTTAAT--ATT--AATAGCAATAGGAGTCAGAATTTTACAAAATATATAAAACGCAAAAA-GGTAAAGGTAGAA------ATTTTCCTTTCACCAGTTTCCCTTCCA-TGTGGATATTTTGATCTGCAAAATGAACAGGTGCTCATTTTCT------------------------------------------------------------------------CCAAAAAGCCTAAACCCACCCAAAAATAGAACGTGTTCTTCTGCACCAAGGAGGGAAGAAGCTGGGAAGATTTTTGTTTTTGT--------AAAAAAT---AA----TTCTA-AAAA----------------------TTAAC-----------------------------------------------------------------CTTTACTATATAATACTGAAAAAAATAAGATTTTCCCAGGAAGATTTGATACTAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1315993 536 - 13651311 TTTTATGTGTTTGAAAGTATA---TCC---TTTTTAGAAGATGTACGTC-----TCTATATAA-TAAATATTGCGTGTACTATG---------------GACAT----------TTTGATGGCTTCTGTGG-------AAGACTCCAGCAAGGAGCAGAGTATTTCAAGTGAA-TTTAAAATAATATTCTGCCCCGTGAATGTGATTCATGGGGCATCAGACAGTACTTTTCGGTCTCAGTGTTCATTCTCTGGTTTTAACTCAAACTTCCTGTTAAT--ATT--AATAGCAATAGGAGTCAGAATTTCACAAAATATATAAAACCCAAAAATGGTAAAGGTAGAA------ATTTTCCTTTCACCAGTTTCCCTTCCA-TGTGGATATTTTGATCTGCAAAATGAACAGATGCTCATTTATTTCCCTTT--------------------------------------------------------------CG-CCAAAAAGCCTAAACCCACCCAAAAATAGAACGTGTTCTTCTGCACCAAGGAGGGAAGAAACTGGGAAGATTTTTGTTTCTGT--------AAAAAAT---AA----TTCTA-AAAA----------------------TTAAC-----------------------------------------------------------------CTTTACTATATAATAATGAAAAAAA-AAGATTTTCCCAGGAAGATTTGATACTAA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1325484 534 - 108792865 TTTTATGTGTTTGAAAGTATG---TCC---TTTTTAGAAGATGTACATC-----TCTATATAA-TAAATGTTACGTGTACTGTG---------------GGCAT----------TTTAACGGCTCCTGCGG-------AAGACTCTGGCAAGGAGCAGAGTATTTCAAGTGAA-TTGAAAATAATATTCTGCCACGTGAATGTTGTTCAT-GGGCATCAGACAGTATTTTTCTGTCTCAGTGTTCGTTCTCTGGCTGTAACTCAAACTTCCTATTAAT--ATT--AATAGCAATAGGAGTTGGAATTTCACAAAATACTCTAAACCTGGAGAAGGAAAAGGTAGAA------ATTGTCCTTTCATCAGTTGCCCTTCCAGTGTGGCTATTTTGATCTCCAGAATGAAGAGATGCTCATTTTCTCCCCTTA--------------------------------------------------------------TG-CCACAACGCCCAAACCCACTCGAAAATAGAGCGTATTCTTCTGCACCAAGGAGTGAAGAAACTGGGAATATTTTTGTTTTTGT-----------AAAA---AA----GTTTA-AAAA----------------------TTAAC-----------------------------------------------------------------CTTTACTATATAATAATGAAAAAGATAAGATTTTCCCAGGAAGATTTGATACTAA i calJac3.chr14 I 1 C 0 s cebCap1.NW_016107827v1 1270002 540 + 1864846 TTTTATGTGTTTGAAAGTATA---TCC---TTTTTAGAAGATGTACATC-----TCTATGCAA-TAAATGTTACATGTACTGTG---------------GACAT----------TTTAACGGCTTCTGTGG-------AAGACTCCAGCAAGGAGCAGAGTATTTCAAGTGAA-TTAAAAATAATATTCTGCCACATGAATGTTGTTCATGGGGCATCAGACATTATTTTTCTGTCTCAGTGTTCGTTCTCTGGCTTTAACTCAAACTTCCAATTAAT--ATT--AATAGCAATAGGAGTTGGAATTTTACATAACATTCTAAACCTGAAAAAGGAAAAGGTAGAA------ATTTTCCTTTCATCAGTTACCCTTCCAGTATGGATATTTTGATCTCCAAAATGAACAGATGCTCATTTTCTTCCCTTA--------------------------------------------------------------TG-CCAAAACGACCAAACCCACTAAAAAATAGAGCGTATTCTTCTCCACCAAGGAGTGAAGAAACTGGGAATATTTTTGTTTTTGTT------AAAAAAAA---AA----GTTTA-AAAA----------------------TTAAC-----------------------------------------------------------------CTTTACTGTATAATAATGAAAAAAATAAGATTTTCCCGTGAAGATTTGATACTAA i cebCap1.NW_016107827v1 I 13 C 0 s otoGar3.GL873658 907543 640 + 5252280 TTTTATGTGTTTAAAAATATA---TTCTCTTTTTTAAAGGATATACATC-----TATGTAT-G-TATATGTAATATGTATTATAAATAAAATTCTTATTAACAT----------TTTAATGGCTTCCATGG-------AAGGCGCTGGAAAGGAGCAGGGTATATCAAGTGAGTTTTAAAGTAATATTCTTCCATATGAATG-GAGAGACAGAGCGTCAGGCAACATTGTTCTGTCCAGATACTTATTCTCATTTGTTAACTCAGACTTCCTATGAGT--ATCCAAATAGAAATA-GAGTTAGAACTTTATAAAATATCCAGCAACAGAAAA-GATAAAATTAGAG------ATTTCTCTTTCCCCAACTTCTCTCATAATGTGGGTATTCTGGGCTCCAAATCCAAGAGGTGCTCATCATCTTACCATA--------------------------------------------------------------CC-CCAGAAAGCCCAAGCCCACTGAAAAATAAGAC----TCTTTTGCACAAAGATGTGAAGAAATTGAAGATTTTTTGGTTTTAAG-------AAAAAAAG---AAAAATTTTTA-AAAAGGGCCCCCAACGCAACAAGTCCCAaaccggggggcaacaacccccagaactgcattaaagggccacagcattaggaaggttgagaaccactgctctaCTGGATAGTAACAAAAAGAAT---ATTTTCCCAGGAAGATTTGATGCTAA i otoGar3.GL873658 I 1 C 0 s mm10.chr12 89954845 573 - 120129022 GCTTCTGTTGTTGAAGTTGTAACCTCC---TCCTTACACAATG----TT-----TCTCCATCA-TGTATGTAGAATGTGTTATACATGAT---------GCCCC----------TTTGA--GCACTTGAGGTTCCTCTCAGACTCTAGAGGGGAATAGAGTGGTCC--------TCC-------TTGTCTACCCTAGAGCTG----------------------------TCTGTGTGGGACTTGGTTCTCAGGTTTCTACTCAGACTTCCTGTTAGTTGACT---GTAGCAACAGGAGGTAAGAGTTCTGTGAACACAC---ACTCAGAGGGGAAAGAGGCAGAATGGTGGCGTCCCCTCTCCCCAAATCCTCTTTTGCTACATGTACACTGATCTCCAAGTTGAACATATATATATAtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtagagagagagag-agagagagCC-AAACCCACTCAAAATTAAAAGGTG---TTTTGGACTA--GAGTTAAAGAAATGGGGAAATTTTTCATTTTGTTTTTATGAAAAAGCT---CA----GCATA-AAAT----------------------ATGGA-----------------------------------------------------------------TTTTACTGGATACCAGAGAAGGTGACAGCATTTCCCCA-GAATATTAAACTCTAA i mm10.chr12 I 5 C 0 s dasNov3.JH576208 1607325 546 + 4416731 -TTTTTCTGTTTCAAAATATAAC-TGC---TTTTTAGACAATCTATGTTATAGATGCATATAATTACATATTATGTGTA--------------------AACTTTTAATCAGCATTTAATTTAATCCAGAG-------AAGACTCTAA-AAGCAACAGGGCATTTAAGTCATT-TTTAAAATGATATTCTACAAAGGGAATGATGTTCAAGGAGATTCAGAAAACATTTTTCAGTAGAGGTGTTTATTCTCTTCTTTTAACTCAAGCTTCCTATAAAT--ATT--AATGGCAATAGGAGTTAGAATTTGATAAAATATTCACCAACTGAAAAAGATAATGCTGGAA------CTCTTCCTTTCTCTAGTTTCTCTTCTTCTGTGGATATTTTGATCTCCAAATTGAAAGGGTTCACATTTACTTTCCTTA--------------------------------------------------------------TGTCCAAACAGGCTAAACTCAGTCAAAAATACAAAGTGTTCTTCTGCACTAAAAAGTGAAGAAATTGTGA------CTTTTTTTAT-------GAAGATATTCCAC----TTTTA-AAAT----------------------TTA-------------------------------------------------------------------CCTTATTAAATAAAAATGAAAAGAATAGTATTTTCCCAGGAAAATTTGACACTAA i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1176366 2882 - 7082604 M a score=1712973.000000 s hg38.chr2_KI270774v1_alt 52554 194 + 223625 AGTTTATTTTTATATTTGTATGGATATACAATTCTTTCCAAAAA-ATGCACTATTTTTTAAAATTTAAAAACAGTAAAAT---TA--TTTTTTTGTAAAAATGAGACAAAT-GACC-CCATTCCCACAGGCCTTCCCCTTCACATCAGCTGGATCCCTGTGGGTGGCCACGTACAAGGCT-----GTAAAGAAGCCCAGGCTGGGCA s panTro5.chr2A 1329452 186 + 111504155 AGTTTATTTTTATATTTGTATGGATATACAATTCTTTCCAAAAA-ATGCACTATTTTTTAAAATTTAAAAACTGTAAAAG---TA--TTTTTTTGTAAAAATGAGACAA----------ATTCCCACAGGCCTTCCCCTTCAGATCAGCTGGATCCCTGTGGGTGGCCACGTACAAGGCT-----GTAAAGAAGCCCAGGCTGGGCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1290180 185 + 114371477 AGTTTATTTTTATATTTGTATGGATATACAATTCTTTCCAAAAA-ATGCACTATTTTTTAAAATTTAAAAACTGTAAAAG---TA--TTTTTTTGTAAAAAT-AGACAA----------ATTCCCACAGGCCTTCCCCTTCAGATCAGCTGGATCCCTGTGGGTGGCCACGTACAAGGCT-----GTAAAGAAGCCCAGGCTGGGCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1315000 194 + 1464242 AGTTTATTTTTATATTTGTATGGATATACAATTCTTTCCAAAAA-ATGCACTATTTTTTAAAATTTAAAAACAGTAAAAG---TA--TTTTTTTGTAAAAATGAGACAAAT-GACC-CCATTCCCACAGGCCTTCCCCTTCACATCAGCTGGATCCCTGTGGGTGGCCACGCACAAGGCT-----GTAAAGATGCCCAGGCTGGGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1046185 194 + 81552678 aatttatttttatatttgtatggatatACAATTCTTTCCAAAAA-ATGCACTATTTTTTAAAATTTAAAAACAGTAAAAG---TA--TTTTTTTGTAAAAATGAGACAAAT-GACC-CCATTCCCACAGGCCTTCCCCTTCATATCAACTGGATCCCTGTGGGTGGCCACGTACAAGGCT-----GTAAAGACGCCCAGGCTGGGCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1374454 195 + 108979918 AGTTTATTTTTATATTTGTATAGATATACAATTCTTTTGCAAAA-ATGCACTATTTTTTAAAATTTAAAAACAGTAAAAG---TA-TTTTTTTTGTAAAAATGAGACAAAT-GACC-CCATTCCCACAGGCCTTCCTCTTCACATCAACTGGATCCCTGTGGGTGGCCACGTACAAGGCT-----GTAGAGATGCCCAGGCTGGGCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1346643 195 - 111193037 AGTTTATTTTTATATTTGTATAGATATACAATTCTTTCGCAAAA-ATGCACTATTTTTTAAAATTTAAAAACAGTAAAAG---TA-TTTTTTTTGTAAAAATGAGACAAAT-GACC-CCATTCCCACAGGCCTTCCTCTTCACATCAACTGGATCCCTGTGGGTGGCCACGTACAAGGCT-----GTAGAGATGCCCAGGCTGGGCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1374993 195 + 3644372 AGTTTATTTTTATATTTGTATAGATATACAATTCTTTCGCAAAA-ATGCACTATTTTTTAAAATTTAAAAACAGTAAAAG---TA-TTTTTTTTGTAAAAATGAGACAAAT-GACC-CCATTCCCACAGGCCTTCCACTTCACATCAACTGGATCCCTGTGGGTGGCCACGTACAAGGCT-----GTAGAGATGCCCAGGCTGGGCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1329086 194 - 10304083 AGTTTATTTTTATATTTGTATAGATATACAATTCTTTCACAAAA-ATGCACTATTTTTTAAAATTTAAAAACAGTAAAAG---TA--TTTTTTTGTAAAAATGAGACAAAT-GACC-CCATTCCCACAGGCCTTCCTCTTCACATCAGCTGGATCCCTGTGGGTGGCCACGTACAAGGCT-----GTAGAGATGCCCAGGCTGGGCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1400484 194 - 107702431 AGTTTATTTTTATATTTGTATAGATATACAATTCTTTTGCAAAA-ATGCACTATTTTTTAAAATTTAAAAACAGTAAAAG---TA--TTTTTTTGTAAAAATGAGACAAAT-GACC-CCATTCCCACAGGCCTTCCTCTTCACATCAACTGGATCCCTATGGGTGGCCACATACAAGGCT-----GTAGAGATGCCCAGGCTGGGCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 877756 192 - 2200435 AGTTTATTTTTATATTTGTATAGAGATACAATTCTTTCACAAAA-ATGCAC--TTTTTTAAAATTTAAAAACAGTAAAAG---TA--TTTTTTTGTAAAAATGAGACAAAT-GACC-CCATTCCCACAGGCCTTCCTCTTCACATCAACTGGATCCCTGTGGGTGGCCACGTACAAGGCT-----GTAGAGATGCCCAGGCTGGGCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1316529 194 - 13651311 AGTTTATTTTTATATTTGTATAGATATACAATTCTTTCGCAAAA-ATGCACTATTTTTTAAAATTTAAAAACAGTATAAG---TA--TTTTTTTGTAAAAATGAGACAAAT-GACC-CCATTCCCACAGGCCTGCCTTTTCACATCAACTGGATCCTTGTGGGTGGCCACGTACAAGGCT-----GTAAAGATGCCCAGGCTGGGCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1326018 176 - 108792865 AGTTTATTTTTATATTTGTATGGATATAAAATTCTTCC---AAA-ATGCACTATTTTTTAAAATCTAAAAACAGTAAAAG---TATTTTTTTTTGTAAAAATGAGACAAAA-GACC-CTATTCCCACA-GCCTTCCTCTTCACACCAAGTGGATCCCTGTGGGTGGGCATGAACAAGTCT-----GCAAAG---------------- i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1270542 190 + 1864846 AGTTTACTTTTATATTTGTATGGATATAAAATTCTCCC---AAA-ATGCACTATTTTTTAAAATTTAAAAACAGTAAAAG---TA--TTTTTTTGTAAACATGAGACAAAC-GACC-CTATTCCCACA-GCCTTCCTCTTCACACCAAGTGGATCCCTGTGGGTGGGCATGAACAAGTCT-----GTAAAGATGCCCAGGCTGGGCA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 59108 190 + 287728 AGTTTATTTTTATATTTGTATGGATATAAAGTTCTTCC---AAA-ATGCACTATTTTTTAAAATTTAAAAACAGTAAAAC---TA--TTTTTTTGTAAAAATGGGACAAAC-GACC-CTATTCCCACG-GCCTTCCTCTTCACACCAAGTGGATCCCTGTGGGTGGGCATGAACAAGTCT-----GTAAAGATGCCCAGGCTGGGCA i aotNan1.NW_018513311v1 N 0 C 0 s otoGar3.GL873658 908183 187 + 5252280 AGTTTGTT------GTTGTGTAGATATAGAATTCTTTTTGAAAG-ATACACAACCTTTTAAAGTTAAAAGACAGAAAAGA---TA--GTTTCTTATGAAAATGGAGCAGCTGGATT-GCATTATCACCCACTGTCTTGCTCATGTCCGGC-AACACCTGTGGCTGACCACACATAGTGCC------CAGAGTCCCATAGGCAGGCCA i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89955418 149 - 120129022 AGTTTATTTTCACATGTGTGTGAATACACAGCTCTTTCTGGAAG-ATGCAC----------ATTTTAAAAATAACCAGATGCCCA--CTGCCTTCTGTATACTATGCAGGT-G--C-CAAGTGCTGCA--------------------------CCCTG-AAATGGTCACATGCACATTT-----TTAA----GCCCAGGCT----- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1607871 196 + 4416731 AGTTCATTTTTA-ACATTTACAAATATACATTTTTTTTCCAAAAGATGCACAATTTTT--AAATTAAATAACAGCAAAAG---TC--TTTTCTTATACAAATAAAACAGAC-AACCAAAATGCCCTCTTGTCTTCCTATTTATATTAAAACAATGTCAGTG--TTGCTATGTACAATATTATAAAATAAAGAATCACAGACAGAACA i dasNov3.JH576208 C 0 I 1727 e saiBol1.JH378218 1176366 2882 - 7082604 M a score=280279.000000 s hg38.chr2_KI270774v1_alt 52748 40 + 223625 GTGAGGCCACAAGCTGGGCACCAGCCTCCCTGTTCCTGGC s panTro5.chr2A 1329638 40 + 111504155 GTGAGGCCACAAGCTGGGCACCAGCCTCCCTCTTCCTGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1290365 40 + 114371477 GTGAGGCCACAAGCTGGGCACCAGCCTCCCTCTTCCTGGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1315194 40 + 1464242 GTGAGGCCACAAGCTGGGCACCAGCCTCCCTCTTCCTGGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1046379 40 + 81552678 GTGAGGCCACATGCCAGGCACCAGCCTCCCTCTTCCTGGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1374649 40 + 108979918 GTGAGGCCACAGGCCGGGCACCAGCCTCCTTCATCCTGGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1346838 40 - 111193037 GTGAGGCCACAGGCCGGGCACCAGCCTCCTTCATCCTGGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1375188 40 + 3644372 GTGAGACCACAGGCCGGGCACCAGCCTCCTTCATCCTGGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1329280 40 - 10304083 GTGAGGCCACAGGCCGGGCACCAGCCTCCTTCATCCTGGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1400678 40 - 107702431 GTGAGGCCACAGGCCGGGCCCCAGCCTCCTTCATCCTGGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 877948 40 - 2200435 GTGAGGCCACAGGCCGGGCACCAGCCTCCTTCATCCTGGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1316723 40 - 13651311 GTGAGGCCACAGGCCAGGCACCAGCCTCTCTCTTCCTGGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1326194 33 - 108792865 ----AGCCACATGCCAGACAGCAACCTCCCTCTTCCC--- i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1270732 39 + 1864846 G-GCAGCCACACGCCGGACAGCAGCCTCCCTCTTCCCGGC i cebCap1.NW_016107827v1 C 0 I 125 s aotNan1.NW_018513311v1 59298 39 + 287728 G-GGAGCCACACGCCGGACAGCAGCCTCCCTCTTCCCGGC i aotNan1.NW_018513311v1 C 0 I 94 s otoGar3.GL873658 908370 31 + 5252280 GGCTGCCCA------GGGTGTCAGCCG---TCTTCCCAGC i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89955567 16 - 120129022 ------CCT----CCAGGTGCCAAAC-------------- i mm10.chr12 C 0 C 0 e saiBol1.JH378218 1176366 2882 - 7082604 M e dasNov3.JH576208 1608067 1727 + 4416731 I a score=35212.000000 s hg38.chr2_KI270774v1_alt 52788 6 + 223625 AGTGCA s panTro5.chr2A 1329678 6 + 111504155 AGTGCG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1290405 6 + 114371477 AGTGCG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1315234 6 + 1464242 AGTGCG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1046419 6 + 81552678 AGTGCG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1374689 6 + 108979918 AGTGTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1346878 6 - 111193037 AGTGTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1375228 6 + 3644372 AGTGTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1329320 6 - 10304083 AGTGTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1400718 6 - 107702431 AGTGTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 877988 6 - 2200435 AGTGTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1316763 6 - 13651311 AGTGTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1326227 6 - 108792865 AGCCCA i calJac3.chr14 C 0 C 0 s otoGar3.GL873658 908401 6 + 5252280 AGCATG i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89955583 6 - 120129022 TGTTCA i mm10.chr12 C 0 C 0 e aotNan1.NW_018513311v1 59337 94 + 287728 I e saiBol1.JH378218 1176366 2882 - 7082604 M e cebCap1.NW_016107827v1 1270771 125 + 1864846 I e dasNov3.JH576208 1608067 1727 + 4416731 I a score=105022.000000 s hg38.chr2_KI270774v1_alt 52794 19 + 223625 TCAGGGAGATGGCCCGTCA s panTro5.chr2A 1329684 19 + 111504155 TCAGGGAGATGGCCTGTCA i panTro5.chr2A C 0 I 120 s panPan2.chr2A 1290411 19 + 114371477 TCAGGGAGATGGCCCGTCA i panPan2.chr2A C 0 I 80 s gorGor5.CYUI01015607v1 1315240 19 + 1464242 TCAGGGAGATGGCCCATCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1046425 19 + 81552678 TCAGGGAGATGGCCCGTCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1374695 19 + 108979918 TCAGGGCAGCAGCCCGTCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1346884 19 - 111193037 TCAGGGCAGCAGCCCGTCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1375234 19 + 3644372 TCAGGGCAGCAGCCCGTCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1329326 19 - 10304083 TCAGGGCAGCGGCCCGTCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1400724 19 - 107702431 TCAGGGCGGCGGCCCGTCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 877994 19 - 2200435 TCAGGGCAGCGGCCCGTCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1316769 19 - 13651311 TCAGGGAGGCGGCCCGTCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1326233 19 - 108792865 TCGGTGGGGCAGCCCTTCA i calJac3.chr14 C 0 C 0 s otoGar3.GL873658 908407 14 + 5252280 TTGGGGGGACAGCT----- i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 59337 94 + 287728 I e mm10.chr12 89955589 0 - 120129022 C e saiBol1.JH378218 1176366 2882 - 7082604 M e cebCap1.NW_016107827v1 1270771 125 + 1864846 I e dasNov3.JH576208 1608067 1727 + 4416731 I a score=341097.000000 s hg38.chr2_KI270774v1_alt 52813 57 + 223625 TGATGGCACCTGGCCCATGGGGGAGACAGT-----------------------------------------CCTTCATGACTGATGGCACCTGGCCCA s panTro5.chr2A 1329823 57 + 111504155 TGATGGCACCTGGCCCATGGGGGAGACAGT-----------------------------------------CCTTCATGACTGATGGCACCTGGCCCA i panTro5.chr2A I 120 C 0 s panPan2.chr2A 1290510 57 + 114371477 TGATGGCACCTGGCCCATGGGGGAGACAGT-----------------------------------------CCTTCATGACTGATGGCACCTGGCCCA i panPan2.chr2A I 80 C 0 s gorGor5.CYUI01015607v1 1315259 57 + 1464242 TGATGGCACCTGGCCCATGGGGGAGACAGT-----------------------------------------CCTTCATGACTGATGGCACCTGGCCCA i gorGor5.CYUI01015607v1 C 0 I 120 s nomLeu3.chr19 1046444 57 + 81552678 TGATGGCATCTGGCCCATGGGGGAGACAGT-----------------------------------------CCTTCATGATTGATGGCACCTGGCCCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1374714 57 + 108979918 TGATGGCACCTGGTCCATGGGGCAGACAGT-----------------------------------------CCTTCATCATTGACGGCACCTGGCCCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1346903 57 - 111193037 TGATGGCACCTGGTCCATGGGGCAGACAGT-----------------------------------------CCTTCATCATTGACGGCACCTGGCCCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1375253 57 + 3644372 TGATGGCACCTGGTCCATGGGGCAGACAGT-----------------------------------------CCTTCATCATTGACGGCACCTGGCCCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1329345 98 - 10304083 TGATGGCACCTGGTCCATGGGGCAGACAGTCCCTTCATCATTGACGGCAACCTGGCCCATGGGGGCGGTGCCCCTCATGATTGACGGCACCTGGCCCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1400743 57 - 107702431 TGATGGCACCTGGTCCATGGGGCAGACAGT-----------------------------------------CCTTCATCATTGACGGCACCTGGCCCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 878013 57 - 2200435 TGATGGCACCTGGTCCATGGGGCAGACAGT-----------------------------------------CCTTCATCATTGACGGCACCTGGTCCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1316788 57 - 13651311 TGATGGCACCTGGTCCATGGGGCAGACAGT-----------------------------------------CCTTCATAATTGACGGCACCTGGCCCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1326252 57 - 108792865 TGATTCCACCTGGCCCCTGGAGGAAGCAGC-----------------------------------------CGCTCATGACTGATTCCACCTGGACTG i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 59337 94 + 287728 I e mm10.chr12 89955589 0 - 120129022 C e saiBol1.JH378218 1176366 2882 - 7082604 M e cebCap1.NW_016107827v1 1270771 125 + 1864846 I e otoGar3.GL873658 908421 0 + 5252280 C e dasNov3.JH576208 1608067 1727 + 4416731 I a score=21438.000000 s hg38.chr2_KI270774v1_alt 52870 4 + 223625 TCGG s panTro5.chr2A 1329880 4 + 111504155 TGGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1290567 4 + 114371477 TGGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1315436 4 + 1464242 TGGG i gorGor5.CYUI01015607v1 I 120 C 0 s nomLeu3.chr19 1046501 4 + 81552678 TGGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1374771 4 + 108979918 TGGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1346960 4 - 111193037 TGGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1375310 4 + 3644372 TGGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1329443 4 - 10304083 TGGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1400800 4 - 107702431 TGGG i chlSab2.chr14 C 0 I 49 s manLeu1.NW_012103754v1 878070 4 - 2200435 TGGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1316845 3 - 13651311 TGG- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1326309 4 - 108792865 TGGG i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 59337 94 + 287728 I e mm10.chr12 89955589 0 - 120129022 C e saiBol1.JH378218 1176366 2882 - 7082604 M e cebCap1.NW_016107827v1 1270771 125 + 1864846 I e otoGar3.GL873658 908421 0 + 5252280 C e dasNov3.JH576208 1608067 1727 + 4416731 I a score=6600.000000 s hg38.chr2_KI270774v1_alt 52874 1 + 223625 G s panTro5.chr2A 1329884 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1290571 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1315440 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1046505 1 + 81552678 G i nomLeu3.chr19 C 0 I 145 s rheMac8.chr13 1374775 1 + 108979918 G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1346964 1 - 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1375314 1 + 3644372 G i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1329447 1 - 10304083 G i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 878074 1 - 2200435 G i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1316848 1 - 13651311 G i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1326313 1 - 108792865 G i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 59337 94 + 287728 I e mm10.chr12 89955589 0 - 120129022 C e saiBol1.JH378218 1176366 2882 - 7082604 M e cebCap1.NW_016107827v1 1270771 125 + 1864846 I e otoGar3.GL873658 908421 0 + 5252280 C e dasNov3.JH576208 1608067 1727 + 4416731 I e chlSab2.chr14 1400804 49 - 107702431 I a score=12689.000000 s hg38.chr2_KI270774v1_alt 52875 3 + 223625 GAG s panTro5.chr2A 1329885 3 + 111504155 GAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1290572 3 + 114371477 GAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1315441 3 + 1464242 GAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1046651 3 + 81552678 GAG i nomLeu3.chr19 I 145 C 0 s rheMac8.chr13 1374776 3 + 108979918 GAG i rheMac8.chr13 C 0 I 206 s macFas5.chr13 1346965 3 - 111193037 GAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1375315 3 + 3644372 GAG i macNem1.NW_012011978v1 C 0 I 334 s cerAty1.NW_012000820v1 1329448 3 - 10304083 GCG i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 878075 3 - 2200435 GCG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1316849 3 - 13651311 GCG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1326314 3 - 108792865 GGG i calJac3.chr14 C 0 I 63 e aotNan1.NW_018513311v1 59337 94 + 287728 I e mm10.chr12 89955589 0 - 120129022 C e saiBol1.JH378218 1176366 2882 - 7082604 M e cebCap1.NW_016107827v1 1270771 125 + 1864846 I e otoGar3.GL873658 908421 0 + 5252280 C e dasNov3.JH576208 1608067 1727 + 4416731 I e chlSab2.chr14 1400804 49 - 107702431 I a score=9595.000000 s hg38.chr2_KI270774v1_alt 52878 5 + 223625 ACAGT s panTro5.chr2A 1329888 5 + 111504155 ACAGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1290575 5 + 114371477 ACAGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1315444 5 + 1464242 ACAGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1046654 5 + 81552678 ACAGT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1346968 2 - 111193037 ---GT i macFas5.chr13 C 0 I 3 s cerAty1.NW_012000820v1 1329451 2 - 10304083 ---GT i cerAty1.NW_012000820v1 C 0 I 3 s manLeu1.NW_012103754v1 878078 2 - 2200435 ---GT i manLeu1.NW_012103754v1 C 0 I 3 s colAng1.NW_012118821v1 1316852 2 - 13651311 ---GT i colAng1.NW_012118821v1 C 0 I 3 s calJac3.chr14 1326380 5 - 108792865 ACTGT i calJac3.chr14 I 63 I 13 e aotNan1.NW_018513311v1 59337 94 + 287728 I e mm10.chr12 89955589 0 - 120129022 C e saiBol1.JH378218 1176366 2882 - 7082604 M e cebCap1.NW_016107827v1 1270771 125 + 1864846 I e otoGar3.GL873658 908421 0 + 5252280 C e dasNov3.JH576208 1608067 1727 + 4416731 I e chlSab2.chr14 1400804 49 - 107702431 I e macNem1.NW_012011978v1 1375318 334 + 3644372 I e rheMac8.chr13 1374779 206 + 108979918 I a score=4909.000000 s hg38.chr2_KI270774v1_alt 52883 1 + 223625 C s panTro5.chr2A 1329893 1 + 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1290580 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1315449 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1046659 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1374985 1 + 108979918 C i rheMac8.chr13 I 206 C 0 s macFas5.chr13 1346973 1 - 111193037 T i macFas5.chr13 I 3 C 0 s macNem1.NW_012011978v1 1375652 1 + 3644372 C i macNem1.NW_012011978v1 I 334 C 0 s cerAty1.NW_012000820v1 1329456 1 - 10304083 C i cerAty1.NW_012000820v1 I 3 C 0 s chlSab2.chr14 1400853 1 - 107702431 C i chlSab2.chr14 I 49 C 0 s manLeu1.NW_012103754v1 878083 1 - 2200435 C i manLeu1.NW_012103754v1 I 3 C 0 s colAng1.NW_012118821v1 1316857 1 - 13651311 C i colAng1.NW_012118821v1 I 3 C 0 s calJac3.chr14 1326398 1 - 108792865 T i calJac3.chr14 I 13 C 0 e aotNan1.NW_018513311v1 59337 94 + 287728 I e mm10.chr12 89955589 0 - 120129022 C e saiBol1.JH378218 1176366 2882 - 7082604 M e cebCap1.NW_016107827v1 1270771 125 + 1864846 I e otoGar3.GL873658 908421 0 + 5252280 C e dasNov3.JH576208 1608067 1727 + 4416731 I a score=178460.000000 s hg38.chr2_KI270774v1_alt 52884 29 + 223625 CTTCATGATTGATTACACCCAGCCCATGG s panTro5.chr2A 1329894 29 + 111504155 CTTCATGATTGATTACACCCAGCCCATGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1290581 29 + 114371477 CTTCATGATTGATTACACCCAGCCCATGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1315450 29 + 1464242 CTTCATGATTGATTGCACCCAGTCCATGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1046660 29 + 81552678 CTTCATGATTGATATCACCTGGCCCGTGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1374986 29 + 108979918 CCTCATGATTGAGGGCACCTGGCCCATAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1346974 29 - 111193037 CCTCATGATGGACGGCACCTGGCCCATGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1375653 29 + 3644372 CCTCATGATTGAGGGCACCTGGCCCATAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1329457 29 - 10304083 CCTCATGATTGACGGCACCTGGCCCATGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1400854 29 - 107702431 CCTCATGATTGACGGCACCTGGCCCATAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 878084 29 - 2200435 CCTCATGATTGACAGCACCTGGCCCACAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1316858 29 - 13651311 CCTCATGATTGACGGCACCTGGCCCATGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1326399 29 - 108792865 CTTCATGATTGATTCCACCTGGCCCATGG i calJac3.chr14 C 0 I 73 s aotNan1.NW_018513311v1 59431 29 + 287728 CTTCATCATGGATTCCACCTGGCCCATGG i aotNan1.NW_018513311v1 I 94 C 0 s otoGar3.GL873658 908421 7 + 5252280 -------ATTGATT--------------- i otoGar3.GL873658 C 0 C 0 e mm10.chr12 89955589 0 - 120129022 C e saiBol1.JH378218 1176366 2882 - 7082604 M e cebCap1.NW_016107827v1 1270771 125 + 1864846 I e dasNov3.JH576208 1608067 1727 + 4416731 I a score=46316.000000 s hg38.chr2_KI270774v1_alt 52913 9 + 223625 GGGAGGCAG s panTro5.chr2A 1329923 9 + 111504155 GGGAGGCAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1290610 9 + 114371477 GGGAGGCAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1315479 9 + 1464242 GGGAGGCAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1046689 9 + 81552678 GGGAGGCAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1375015 9 + 108979918 GGGAGGAAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1347003 9 - 111193037 GGGCGGTGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1375682 9 + 3644372 GGGAGGAAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1329486 9 - 10304083 GGGCGGTGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1400883 9 - 107702431 GGGAGGAAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 878113 9 - 2200435 GGGAGGAAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1316887 9 - 13651311 GGGCGGAAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1326501 9 - 108792865 GGGTGTCAG i calJac3.chr14 I 73 C 0 s cebCap1.NW_016107827v1 1270896 9 + 1864846 GGGTGTCAG i cebCap1.NW_016107827v1 I 125 C 0 s aotNan1.NW_018513311v1 59460 9 + 287728 GGGAGGCCG i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89955589 0 - 120129022 C e saiBol1.JH378218 1176366 2882 - 7082604 M e otoGar3.GL873658 908428 0 + 5252280 C e dasNov3.JH576208 1608067 1727 + 4416731 I a score=66884.000000 s hg38.chr2_KI270774v1_alt 52922 10 + 223625 CCCTTCCTGA s panTro5.chr2A 1329932 10 + 111504155 CCCTTCCTGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1290619 10 + 114371477 CCCTTCCTGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1315488 10 + 1464242 CCCTCCCTGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1046698 10 + 81552678 CCCTTCCTGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1375024 10 + 108979918 CCGTTCATGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1347012 10 - 111193037 CCCCTCATGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1375691 10 + 3644372 CCGTTCATGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1329495 10 - 10304083 CCCCTCATGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1400892 10 - 107702431 CCGTTCATGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 878122 10 - 2200435 CCGTTCATGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1316896 10 - 13651311 CCGTTCCTGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1326510 10 - 108792865 CCCTCCGTGT i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1270905 10 + 1864846 CCCTTCGTGT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 59469 10 + 287728 CCCTTCCTGA i aotNan1.NW_018513311v1 C 0 I 72 s otoGar3.GL873658 908428 1 + 5252280 ---------A i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89955589 10 - 120129022 CCCTTCTCAA i mm10.chr12 C 0 C 0 e saiBol1.JH378218 1176366 2882 - 7082604 M e dasNov3.JH576208 1608067 1727 + 4416731 I a score=17353.000000 s hg38.chr2_KI270774v1_alt 52932 3 + 223625 TTG s panTro5.chr2A 1329942 3 + 111504155 TCG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1290629 3 + 114371477 TCG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1315498 3 + 1464242 TCG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1046708 3 + 81552678 TCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1375034 3 + 108979918 TCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1347022 3 - 111193037 TTG i macFas5.chr13 C 0 I 202 s macNem1.NW_012011978v1 1375701 3 + 3644372 TCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1329505 3 - 10304083 TTG i cerAty1.NW_012000820v1 C 0 I 40 s chlSab2.chr14 1400902 3 - 107702431 TCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 878132 3 - 2200435 TCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1316906 3 - 13651311 TCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1326520 3 - 108792865 TTG i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1270915 3 + 1864846 TCG i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 908429 3 + 5252280 TTG i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89955599 3 - 120129022 CCA i mm10.chr12 C 0 C 0 e aotNan1.NW_018513311v1 59479 72 + 287728 I e saiBol1.JH378218 1176366 2882 - 7082604 M e dasNov3.JH576208 1608067 1727 + 4416731 I a score=185.000000 s hg38.chr2_KI270774v1_alt 52935 1 + 223625 -C s panTro5.chr2A 1329945 1 + 111504155 -C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1290632 1 + 114371477 -C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1315501 1 + 1464242 -C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1046711 1 + 81552678 -C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1375037 1 + 108979918 -C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1347227 1 - 111193037 -C i macFas5.chr13 I 202 C 0 s macNem1.NW_012011978v1 1375704 1 + 3644372 -C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1329548 1 - 10304083 -C i cerAty1.NW_012000820v1 I 40 C 0 s chlSab2.chr14 1400905 1 - 107702431 -C i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 878135 1 - 2200435 -C i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1316909 1 - 13651311 -C i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1326523 1 - 108792865 -T i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1270918 1 + 1864846 -T i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 908432 1 + 5252280 -C i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89955602 1 - 120129022 A- i mm10.chr12 C 0 C 0 e aotNan1.NW_018513311v1 59479 72 + 287728 I e saiBol1.JH378218 1176366 2882 - 7082604 M e dasNov3.JH576208 1608067 1727 + 4416731 I a score=20616.000000 s hg38.chr2_KI270774v1_alt 52936 2 + 223625 AC s panTro5.chr2A 1329946 2 + 111504155 AC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1290633 2 + 114371477 AC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1315502 2 + 1464242 AC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1046712 2 + 81552678 AC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1375038 2 + 108979918 AC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1347228 2 - 111193037 AC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1375705 2 + 3644372 AC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1329549 2 - 10304083 AC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1400906 2 - 107702431 AC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 878136 2 - 2200435 AC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1316910 2 - 13651311 AC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1326524 2 - 108792865 AC i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1270919 2 + 1864846 AC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 59551 2 + 287728 AC i aotNan1.NW_018513311v1 I 72 C 0 s otoGar3.GL873658 908433 1 + 5252280 -A i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89955603 2 - 120129022 AC i mm10.chr12 C 0 C 0 e saiBol1.JH378218 1176366 2882 - 7082604 M e dasNov3.JH576208 1608067 1727 + 4416731 I a score=1011327.000000 s hg38.chr2_KI270774v1_alt 52938 132 + 223625 CCCTTTAAAACCGAGACTCCTCAAGTGGCCTCAGTATCTCCTTTGACCAGGCCC-------TTGCTA-----GG---------------------------------GGGGCCCAG-GTCAGAAATTGTTTTATTTTTATTTGAGACACG-CAGTTGATTCTAAGATCTCCTTAGCTTT s panTro5.chr2A 1329948 132 + 111504155 CCCTTTAAAACCGAGACTCCTCAAGTGGCCTCAGTATCTCCTTTGACCAGGCCC-------TTGCTA-----GG---------------------------------GGGGCCCGG-GTCAGAAATTGTTTTATTTTTATTTGAGACACG-CAGTTGATTCTAAGATCTCTTTAGCTTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1290635 132 + 114371477 CCCTTTAAAACCGAGACTCCTCAAGTGGCCTCAGTATCTCCTTTGACCAGGCCC-------TTGCTA-----GG---------------------------------GGGGCCCGG-GTCAGAAATTGTTTTATTTTTATTTGAGACACG-CAGTTGATTCTAAGATCTCTTTAGCTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1315504 132 + 1464242 CCCTTTAAAACCGAGACTCCTCAAGTGGCCTCAGTATCTCCTTCGACCAGGCCC-------TTGCGA-----GG---------------------------------GGGGCCCGG-GTCAGAAATTGTTTTATTTTTATTTGAGACATG-CAGCTGATTCTAAGATCTCCTTAGCTTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1046714 165 + 81552678 CCCGTGGGGGAGGCAGCCCTTCCTGTGGCCTCAGTATCTCCTTCGACCAGGCCC-------TTGCGA-----GGTGGGGCCCGGGTTCGACCAGGCCCTTGCGAGGTGGGGCCCGG-GTCAGAAGTTGTTTTATTTTTATTTGAGACACT-CAGTTGATTCTAAGATCTCCTTAGCTTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1375040 123 + 108979918 CCCTTTGAAACCGAGAC-----------CCTCAGTATCTCCTCCCACCAGGCCC-------TTACAA-----AG--------------------------------TGGGGCCCGGGGCCGGAAATTGTTTTATTTTTATTTGAGACACG-TAGTTTATTCTAAGATCTCCTTAGCTTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1347230 123 - 111193037 CCCTTTGAAACCGAGAC-----------CCTCAGTATCTCCTCCCACCAGGCCC-------TTACAA-----AG--------------------------------TGGGGCCCGGCGCCAGAAATTGTTTTATTTTTATTTGAGACACG-TAGTTTATTCTAAGATCTCCTTAGCTTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1375707 123 + 3644372 CCCTTTGAAACCGAGAC-----------CCTCAGTATCTCCTCCCACCAGGCCC-------TTACAA-----AG--------------------------------TGGGGCCCGGAGCCGGAAATTGTTTTATTTTTATTTGAGACACG-TAGTTTATTCTAAGATCTCCTTAGCTTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1329551 123 - 10304083 CCCTTTGAAACCGAGAC-----------CCTCAGTATCTCCTCCCACCAGGCCC-------TTACAA-----AG--------------------------------TGGGGCCCGGGGCCGGAAATTGTTTTATTTTTATTTGAGACACG-TAGTTGATTCTAAGATCTCCTTAGCTTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1400908 123 - 107702431 CTCTTTGAAACCGAGAC-----------TCTCAGTATCTCCTCCCACCAGGCCC-------TTACGA-----AG--------------------------------TGGGGCCCGGGGCCAGAAATTGTTTTATTTTTATTTGAGACATG-CAGTTGATTCTAAGATCTCCTTAGCTTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 878138 123 - 2200435 CCCTTTGAAACCGAGAC-----------CCTCAGTATCTCCTCCCACCAGGCCC-------TTACAA-----AG--------------------------------TGGGGCCCGGGGCCGGAAATTGTTTTATTTTTATTTGAGACACG-TAGTTGATTCTAAGATCTCCTTAGCTTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1316912 122 - 13651311 CCCTTTGAAACCAAGAC-----------CCTCAGTATCTCCTCCCACCAGGCCC-------TTAGAA-----AG--------------------------------TGGGGCCCGGGGCCGGAAATTG-TTTATTTTTATTTGAGAGACG-TAGTTGATTCTAAGATCTCCTTAGCTTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1326526 130 - 108792865 CCCTTTGAAACTGAGAGTCCTCAAGTGGCCTCAGCATCTCCTTCTACCAGGCCC--------TGCAA-----GG--------------------------------TAGGGCCCAG-GTCAGAAATTGTTTTATTTTTATTTGAAACACAATAGTTGATTCCAAGAT---CTCAGCTTT i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1270921 134 + 1864846 CCCTTTGAAACTGAGACTCCTAAAGTGGCCTCAGCATCTCCTTCTACCAAGCCC-------TTGCGA-----GG--------------------------------TAGGGCCCAG-GTCAGAAATTGTTTCATTTTTATTTGAAACACAATAGTTGATTCCAAGATCTCCTCAGCTTT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 59553 134 + 287728 CCCTTGGAAACTGAGACTCCTCAAGTGGCCTCAGCATCTCCTTCTACCAGGCCC-------TTGCGA-----GG--------------------------------TAGGGCCCAG-GTCAGGAATTGTTTTATTTTTATTTGAAACACATTAGTTGATTCCAAGATCTCCTCAGCTTT i aotNan1.NW_018513311v1 C 0 I 45 s otoGar3.GL873658 908434 135 + 5252280 CCATTTGAAAAGAAGACCCCTCAGCCAGTCTTAGTATTTTCTTCTCCCAGACCCAGACTCTTCAGGG-----GA--------------------------------TAGGGGCCAA-GTCAGAAACGGTTTTA-----ATTTGAGATATC-CAGGTATCTCTAAAATCTCCTCAGTTTT i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89955605 102 - 120129022 CATTCTCAGAACAAGATAC---------CCCAAGGATCTCATC--ACCTGCTCC-------T----------GG-------------------------------------------GTCAGACG----TTTATTTTC-TTTGGGATACC-TAATTAATCTTAAGATCATCTCAGTTCT i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1609794 135 + 4416731 CCATTTTGGAAAAAAATTCACCAAGAAGAATTGGTATCTTCTGC--CCTGGTCC-------TTTCTGCTGGTGA--------------------------------TGGAGGCCAA-CTGGGCAATTATTTCATTTTTATTCAGGAGATG-CAGTTATTCCTAAGA-CTTCTTAGTTTT i dasNov3.JH576208 I 1727 C 0 e saiBol1.JH378218 1176366 2882 - 7082604 M a score=386084.000000 s hg38.chr2_KI270774v1_alt 53070 56 + 223625 GGGTTTTAATCAAAAGGTAA--------------TGGG-GTCACCTGCAGATCTCCATCGCTAACATCTAT- s panTro5.chr2A 1330080 56 + 111504155 GGGTTTTAATCAAAAGGTAA--------------TGGG-GTCACCTGCAGATCTCCATCGCTAACATCTAT- i panTro5.chr2A C 0 I 3 s panPan2.chr2A 1290767 56 + 114371477 GGGTTTTAATCAAAAGGTAA--------------TGGG-GTCACCTGCAGATCTCCATCGCTAACATCTAT- i panPan2.chr2A C 0 I 3 s gorGor5.CYUI01015607v1 1315636 56 + 1464242 GGGTTTTAATCAAAAGGTAA--------------TGGG-GTCACCTGTTGATCTCCATCGCTAACATCTAT- i gorGor5.CYUI01015607v1 C 0 I 3 s nomLeu3.chr19 1046879 56 + 81552678 GGGTTTTAATCAAAAGGTAA--------------TGGG-GTCACCTGCAGATCTCCATAGCTAACATCTAC- i nomLeu3.chr19 C 0 I 3 s rheMac8.chr13 1375163 56 + 108979918 GGGTTTTAATCAAAAGGTAA--------------TGGG-GTCACCTGTAGATCTCCACAGCTAACATCTAC- i rheMac8.chr13 C 0 I 3 s macFas5.chr13 1347353 56 - 111193037 GGGTTTTAATCAAAAGGTAA--------------TGGG-GTCACCTGTAGATCTCCACAGCTAACATCTAC- i macFas5.chr13 C 0 I 3 s macNem1.NW_012011978v1 1375830 56 + 3644372 GGGTTTTAATCAAAAGGTAA--------------TGGG-GTCACCTGTAGATCTCCACAGCTAACATCTAC- i macNem1.NW_012011978v1 C 0 I 3 s cerAty1.NW_012000820v1 1329674 56 - 10304083 GGGTTTTAATCAAAAGGTAA--------------TGGG-GTCACCTGTAGATCTCCACGGCTAACATCTAC- i cerAty1.NW_012000820v1 C 0 I 3 s chlSab2.chr14 1401031 56 - 107702431 GGGTTTTAATCAAAAGGTAA--------------TGGG-GTCACCTGTAGATCTCCACAGCTAACATCTAC- i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012103754v1 878261 56 - 2200435 GGGTTTTAATCAAAAGGTAA--------------TGGG-GTCACCTGTAGATCTCCACAGCTAACATCTAC- i manLeu1.NW_012103754v1 C 0 I 3 s colAng1.NW_012118821v1 1317034 56 - 13651311 GGGTTTTAATCAAAAGGTAA--------------TGGG-GTCACCTGTAGATCTCCATAGCTAACATCTAC- i colAng1.NW_012118821v1 C 0 I 3 s calJac3.chr14 1326656 56 - 108792865 AGGTTTTAATCAAAAGGTAA--------------CGGG-GTTATCTGGAGCTCTCTGTAGCTAAGGTCTAC- i calJac3.chr14 C 0 I 3 s cebCap1.NW_016107827v1 1271055 56 + 1864846 AGGTTTTAATCAAAAGGTAA--------------CGGG-GTTATCTGGAGCTCTCCGTAGCTAATGTCTGC- i cebCap1.NW_016107827v1 C 0 I 3 s otoGar3.GL873658 908569 13 + 5252280 GAATTTTACTGAA----------------------------------------------------------- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89955707 57 - 120129022 ATCTTCCTATTAGAAAATAAGCTGTGATCTCTGCTGAG-GCTGTTTGTGGGCACCCAT-------------- i mm10.chr12 C 0 I 9 s dasNov3.JH576208 1609929 57 + 4416731 ATATTCAAATTAAACATTAG--------------TAAGAATCATCTG-AAATCTTtacagctaatgtttatt i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 59687 45 + 287728 I e saiBol1.JH378218 1176366 2882 - 7082604 M a score=63414.000000 s hg38.chr2_KI270774v1_alt 53126 6 + 223625 GAAGTC s panTro5.chr2A 1330139 6 + 111504155 GAAGTC i panTro5.chr2A I 3 C 0 s panPan2.chr2A 1290826 6 + 114371477 GAAGTC i panPan2.chr2A I 3 C 0 s gorGor5.CYUI01015607v1 1315695 6 + 1464242 GAAGTC i gorGor5.CYUI01015607v1 I 3 C 0 s nomLeu3.chr19 1046938 6 + 81552678 GAAGTC i nomLeu3.chr19 I 3 C 0 s rheMac8.chr13 1375222 6 + 108979918 GAAGTC i rheMac8.chr13 I 3 C 0 s macFas5.chr13 1347412 6 - 111193037 GAAGTC i macFas5.chr13 I 3 C 0 s macNem1.NW_012011978v1 1375889 6 + 3644372 GAAGTC i macNem1.NW_012011978v1 I 3 C 0 s cerAty1.NW_012000820v1 1329733 6 - 10304083 GAAGTC i cerAty1.NW_012000820v1 I 3 C 0 s chlSab2.chr14 1401088 6 - 107702431 GAAGTC i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012103754v1 878320 6 - 2200435 GAAGTC i manLeu1.NW_012103754v1 I 3 C 0 s colAng1.NW_012118821v1 1317093 6 - 13651311 GAAGTC i colAng1.NW_012118821v1 I 3 C 0 s calJac3.chr14 1326715 6 - 108792865 GAACTC i calJac3.chr14 I 3 C 0 s cebCap1.NW_016107827v1 1271114 6 + 1864846 GAACTC i cebCap1.NW_016107827v1 I 3 C 0 s aotNan1.NW_018513311v1 59732 6 + 287728 GAACTC i aotNan1.NW_018513311v1 I 45 C 0 s otoGar3.GL873658 908582 5 + 5252280 -AACTC i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89955773 6 - 120129022 GCAGCT i mm10.chr12 I 9 C 0 s dasNov3.JH576208 1609986 6 + 4416731 gaaatc i dasNov3.JH576208 C 0 I 388 e saiBol1.JH378218 1176366 2882 - 7082604 M a score=1585681.000000 s hg38.chr2_KI270774v1_alt 53132 221 + 223625 ACCAGCTCACCACCTCTCCTGGGGTGCAGGCTCCGG--CCCTTCGGCTCCCA-TTTCCAG-GTACAGAAGCAGAGGGTCA-AGGGGC-CCAACAA------------------------GGTGTCTACAGCCCTGGAGCTGGCCAGGAGCCCAGG--CCTTCTGCCGCCCGCCCGGGAGTCCTCACACCT-------------------------------GGGCCTCCTCACACCAGGAGTCCTCACACACAGGGCCCGACTCCCTCACTAAGCAGGGGACCC s panTro5.chr2A 1330145 221 + 111504155 ACCAGCTCACCACCTCTCCTGGGGTGCAGGCTCCGG--CCCTTCGGCTCCCA-TTTCCAG-GTACAGAAGCAGAGGGTCA-AGGGGC-CCAACAA------------------------GGTGTCTGCAGCCCTGGAGCTGGCCAGGAGCCCAGG--CCTTCTGCCACCCGCCCGGGAGTCCTCACACCT-------------------------------GGGCCTCCTCACACCAGGAGTCCTCACACACAGGGCCCGACTCCCTCACTAAGCAGGGGACCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1290832 221 + 114371477 ACCAGCTCACCACCTCTCCTGGGGTGCAGGCTCCGG--CCCCTCGGCTCCCA-TTTCCAG-GTACAGAAGCAGAGGGTCA-AGGGGC-CCAACAA------------------------GGTGTCTGCAGCCCTGGAGCTGGCCAGGAGCCCAGG--CCTTCTGCCACCCGCCCGGGAGTCCTCACACCT-------------------------------GGGCCTCCTCACACCAGGAGTCCTCACACACAGGGCCCGACTCCCTCACTAAGCAGGGGACCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1315701 253 + 1464242 ACCAGCTCACCACCTCTCCTGGGGTGCAGGCTCCGG--CCCTTCGGCTCCCATTTTCCAG-GTACAGAAGCAGAGGGTCA-AGGGGC-CCAACAA------------------------GGTGTCTGCAGCCCTGGAGCTGGCCAGGAGCCCAGG--CCTTCTGCCGCCCGCCCAGGAGTCCTCACACCTGGGCCTCCTCACACCAGGAGTCCTCACACCTGGGCCTCCTCACACCAGGAGTCCTCACACACAGGGCCCGACTCCCTCACTGAGCAGGGGACCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1046944 191 + 81552678 ACCAGCTCACCACCTCTCCTGGGATGCAGGCTCCGG--CCCTTCGGCTCCCA-TTTCCAG-GTACAGAAGCAGAGGGTCA-AGGGGC-CCAACAA------------------------GGTGTCTGCAGCCCTGGAGCTGGCCAGGAGCCCAGG--CCTTCTGCCACGTGCCCGGGAGTCCTCACACCA-------------------------------------------------------------CAGGGCCCAACTCCCTCACTGAGCAGGGGACCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1375228 190 + 108979918 ACCAGCTCACCGCCACTCCTAGGGTGCAGGCTCCGG---CCTTCGGCTCCCA-TTTCCAG-GTACAGAAGCAGAGAGTCA-AGGGGC-CCAGCAA------------------------GGTGTCTGTAGCCCTGGAGCTGGCCAGGAGCCCAGG--CCTCCTGCCACCCACCTGGGAGTCCTCACACCA-------------------------------------------------------------CAGGGACCACCTCCCTCACTAAGCAGGGGACCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1347418 190 - 111193037 ACCAGCTCACCGCCACTCCTAGGGTGCAGGCTCCGG---CCTTCGGCTCCCA-TTTCCAG-GTACAGAAGCAGAGAGTCA-AGGGGC-CCAGCAA------------------------GGTGTCTGTAGCCCTGGAGCTGGCCAGGAACCCAGG--CCTCCTGCCACCCACCCGGGAGTCCTCACACCA-------------------------------------------------------------CAGGGCCCACCTCCCTCACTAAGCAGGGGACCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1375895 190 + 3644372 ACCAGCTCACCGCCACTCCTAGGGTGCAGGCTCCGG---CCTTCGGCTCCCA-TTTCCAG-GTACAGAAGCAGAGAGTCA-AGGGGC-CCAGCAA------------------------GGTGTCTGTAGCCCTGGAGCTGGCCAGGAGCCCAGG--CCTCCTGCCACCCACCCGGGAGTCCTCACACCA-------------------------------------------------------------CAGGGCCCACCTCCCTCACTAAGCAGGGGACCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1329739 190 - 10304083 ACCAGCTCACCGCCACTCCTAGGGTGCAGGCTCCGG---CCTTCGGCTCCCA-TTTCCAG-GTAAAGAAGCAGAGGGTCA-AGGGGC-CCAGCAA------------------------GGTGTCTGTAGCCCTGGAGCTGGCCAGGAGCCCAGG--CCTCCTGCCACCCACCCGGGAGTCCTCACACCA-------------------------------------------------------------CAGGGCCCACCTCCCTCACTGAGCAGGGGACCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1401094 190 - 107702431 ACCAGCTCACCGCCACTCCTAGGGTGCAGGCTCCGG---CCTTCGGCTCCCA-TTTCCAG-GTACAGAAGCAGAGGGTCA-AGGGGC-CCAGCAA------------------------GGTGTCTGTAGCCCTGGAGCTGACCAGGAGCCCAGG--CCTCCTACCACCCACCCGGGAGTCCTCACACCA-------------------------------------------------------------CAGGGCCCACCTCCCTCACTGAGCAGGGGACCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 878326 190 - 2200435 ACCAGCTCACCGCCACTCCTAGGGTGCAGGCTCCGG---CCTTCGGCTCCCA-TTTCCAG-GTACAGAAGCAGAGGGTCA-AGGGGC-CCAGCAA------------------------GGTGTCTGTAGCCCTGGAGCTGGCCAGGAGCCCAGG--CCTCCTGCCACCCACCCGGGAGTCCTCACACCA-------------------------------------------------------------CAGGGCCCACCTCCCTCACTGAGCAGGGGACCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1317099 190 - 13651311 ACCAGCTCACTGCCACTCCTAAGGTGCAGGCTCCGG---CCTTGGGCTCCCA-TTTCCAG-GTACAGAAGCAGAGGATCA-AGGGGC-CCAGCAA------------------------GGTATCTGTAGCCCTGGAGCTGGCCAGGAGCCCAGG--CCTTCTGCCACCCACCCGGGAGTCCTCACACCA-------------------------------------------------------------CAGGGCCCACCTCCCTCACTGAGTAGGGGACCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1326721 184 - 108792865 ACCAGCTCACCACCGCTCCT-GGCTGCAGGCTCCGG---CCTTTGGTTCCCATTTTGCAG-GTACCGAAGCAGAG-------GGGGC-CGAGCAA------------------------GGTGTCTGCAGCCCTGGAGCTGGCCAGGAGCCCAGG--CCTTCTGCTGCCAACCCGGGGGTCCTCACACCA-------------------------------------------------------------CAGGGCCCGACTCCCTCACTGAGCAGGGGACCG i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1271120 190 + 1864846 ACCAGCTCACCACTGCCCCT-GGCTGCAGGCTCAGG---CCTTTGGTTCCCATTTTGCAG-GTACCAAAGCACAGGGTCA-AGGGGC-CCAGCGA------------------------GGTGTCTGCAGCCCTGGAGCTGGCCAGGAGCCCAGG--CCTGCTGCTACCCACCCGGGGGTCCTCACACCA-------------------------------------------------------------CAGGGCCTGATTCCCTCACTGAGCAGGGGACCG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 59738 188 + 287728 ACCAGCTCACCACCGCTCCT-GGCCGCAGGCTCA-G---TCTTTGGTTCCCACTTTGCAG-GTACCGAAGCAGAGGGTCA-AGGGGC-CCAGC-A------------------------GGTGTCTGCAGCCCTGGAGCTGGCCAGGAGCCCAGG--CCTTCTGCTGCCCACCCGGGGGTCCTCCCACCA-------------------------------------------------------------CAGGGCCCGACTCCCTCACTGAGCAGGGGACCG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 908587 201 + 5252280 ACCAGCTCAGCACCCCTACCCAGGTGCAGGCAGAGA---GCTTTGACTCTCA-CTTTCAG-GAGAAGAAAGGGGGGTCTACAGGGAC-TTGGCCATTGAAAGCCACCATCTGCTAGGGTGGGGGCTGGGGCACAGGAGCCAGCAAGGAGCCAAGG--TC-ACTGTCACCT-----GAAGCCCTCCTGCCA-------------------------------------------------------------C--------CCCCAATCCCTGAGAAAAGGACAC i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89955779 165 - 120129022 CCCAGATCA---------CTTAGGCGCAGGCAAAATCTCTCCTGGGCTCTCA-CTTGCAGTATGAAGACACTGAGGCTTA-TCAGGCACCAGTGA------------------------G-----------------ACTGGCCTGTGTCCCCAGCACCTATCACACCCCACTTGGTATTTGTAGTTCTA-------------------------------------------------------------CCAAGCAACCTGCAGACTCTGAGCTGG------ i mm10.chr12 C 0 C 0 e saiBol1.JH378218 1176366 2882 - 7082604 M e dasNov3.JH576208 1609992 388 + 4416731 I a score=164021.000000 s hg38.chr2_KI270774v1_alt 53353 25 + 223625 TCAGAACCCACAG--CAGC-------CACGCCGA s panTro5.chr2A 1330366 25 + 111504155 TCAGAACCCACAG--CAGC-------CACGCCGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1291053 25 + 114371477 TCAGAACCCACAG--CAGC-------CACGCCGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1315954 25 + 1464242 TCAGAACCCACAG--CAGC-------CATGCTGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1047135 25 + 81552678 TCAGAACCCACAG--CAGC-------CACGCCGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1375418 25 + 108979918 TCCGAACCCACAG--CAGC-------CACACCCG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1347608 25 - 111193037 TCCGAACCCACAG--CAGC-------CACACCCG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1376085 25 + 3644372 TCCGAACCCACAG--CAGC-------CACACCCG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1329929 25 - 10304083 TCCGAACCCACAG--CAGC-------CACGCCCG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1401284 25 - 107702431 TCCGAACCCACAG--CAGC-------CACGCCCG i chlSab2.chr14 C 0 I 153 s manLeu1.NW_012103754v1 878516 25 - 2200435 TCCGAACCCACAG--CAGC-------CACGCCCG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1317289 25 - 13651311 TCCGAACCCATAG--CAGC-------CACGCCAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1326905 31 - 108792865 TCAGAACACAGCG--CAGCTCTGGGGCCTGGGG- i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1271310 24 + 1864846 TCAGAACACACCG--CAGC-------CCCGGGG- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 59926 24 + 287728 TCAGAACGCACCG--CAGC-------CCCGGGG- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 908788 25 + 5252280 CCAGAACTTACCT--CTGC-------CACGCAGG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1610380 27 + 4416731 TCAGAATTCACAGTTCTGC-------CATGCAAG i dasNov3.JH576208 I 388 C 0 e mm10.chr12 89955944 0 - 120129022 C e saiBol1.JH378218 1176366 2882 - 7082604 M a score=185151.000000 s hg38.chr2_KI270774v1_alt 53378 31 + 223625 CCTGGGGAGTC-TTCCTGGGGGG---GCGGATTTA s panTro5.chr2A 1330391 31 + 111504155 CCTGGGGAGTC-TTCCTGGGGGG---GCGGATTTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1291078 31 + 114371477 CCTGGGGAGTC-TTCCTGGGGGG---GCGGATTTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1315979 30 + 1464242 CCTGGGGAGTC-TTCCT-GGGGG---GCGGATTTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1047160 30 + 81552678 CCTGGGGAGTC-TTCCT-GGGGG---GCAGATTTA i nomLeu3.chr19 C 0 M 100 s rheMac8.chr13 1375443 29 + 108979918 CCTGGGGAGTG-CTCCT-GGGGG---GCCGATTT- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1347633 29 - 111193037 CCTGGGGAGTG-CTCCT-GGGGG---GCCGATTT- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1376110 29 + 3644372 CCTGGGGAGTG-CTCCT-GGGGG---GCCGATTT- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1329954 29 - 10304083 CCTGGGGAGTC-CTCCT-GGGGG---GCCGATTT- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1401462 29 - 107702431 CCTGGGGAGTC-CTCCT-GGGGG---GCCGATTT- i chlSab2.chr14 I 153 C 0 s manLeu1.NW_012103754v1 878541 29 - 2200435 CCTGGTGAGTC-CTCCT-GGGGG---GCCGATTT- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1317314 29 - 13651311 CCTGGGGAGTC-CTCCT-GGGGG---GCCGATTT- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1326936 29 - 108792865 CCTGGAGATTC-TCCCT-GGGGG---ACAGAGTT- i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1271334 29 + 1864846 CCTGGGGATTC-TCCCT-GGGGG---ACAGATTT- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 59950 29 + 287728 CCTGGGGATTC-TCCCC-GGGGG---ACAGATTT- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 908813 29 + 5252280 CCTGTGGGGTC-TCACT-GTGTA---GCCCAAAT- i otoGar3.GL873658 C 0 I 2 s mm10.chr12 89955944 32 - 120129022 TAAGGGTGATC-ATCTT-ACAAGCATGAACATTC- i mm10.chr12 C 0 I 1 s dasNov3.JH576208 1610407 30 + 4416731 TCTGTAAAATCACATCT-GTGTT---GATGTTCA- i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1176366 2882 - 7082604 M a score=2698257.000000 s hg38.chr2_KI270774v1_alt 53409 371 + 223625 TGTCT-TTGCC-CCTCCTTAGA----AAACAGTAGCCATTATCTTACAAGCATGGAT---CCATTTTCCTTCTGC------------TCCATGTCTGTGCATTCCATATCCCATTTGAACAC-------------------------TAAAAACAGAAA--------------------------------------------------------------ACATTGTTGAAACTGATTTGATTTCCAAT----ATGT-----G----GGCATTTGACAGGATAGTATTCTGAATAGATAATTCTCATTAGTGATGTTGCTGTATGAATATTCATCCAGA-AGT---TTTCT-TTACATCTTTTAGAAGGAGGACTGGAAAATGCTCAGAATCCCAAAAGGCAAGGAAA----TGAAATTACAAACATCAGGTCTTTTTTTTTC-A------------ATGGAGAACCACGCACCAAGTATGTCTTTAACTCGGGTGTGTGTCTTGAATACAGG s panTro5.chr2A 1330422 372 + 111504155 TGTCT-TTGCC-CCTCCTTGGA----AAACAGTAGCCATTATCTTACAAACATGGAT---CCATTTTCCTTCTGC------------TGCATGTCTGTGCATTCCATATCCCATTTGAACAC-------------------------TAAAAACAGAAA--------------------------------------------------------------ACGTTGTTGAAACTGATTTAATTTCCAAT----ATGT-----G----GGCATTTGACAGGATAGTATTCTGAATAGATAATTCTCGTTAGTGATGTTGCTGTATGAATATTCATCCAGA-AGT---TTTCT-TTACATCTTTTAGAAGGAGGACTGGAAAATGCTTAGAATCCCAAAAGGCAAGGAAA----TGAAATTACAAACATCAGGTCTTTTTTTTTTTA------------ATGGAGAACCACGCACCAAGTATGTCTTTAACTCGGGTGTGTGTCTTGAATGCAGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1291109 371 + 114371477 TGTCT-TTGCC-CCTCCTTGGA----AAACAGTAGCCATTATCTTACAAACATGGAT---CCATTTTCCTTCTGC------------TGCATGTCTGTGCATTCCATATCCCATTTGAACAC-------------------------TAAAAACAGAAA--------------------------------------------------------------ACGTTGTTGAAACTGATTTAATTTCCAAT----ATGT-----G----GGCATTTGACAGGATAGTATTCTGAATAGATAATTCTCGTTAGTGATGTTGCTGTATGAATATTCATCCAGA-AGT---TTTCT-TTACATCTTTTAGAAGGAGGACTGGAAAATGCTTAGAATCCCAAAAGGCAAGGAAA----TGAAATTACAAACATCAGGTCTTTTTTTTTT-A------------ATGGAGAACCACGCACCAAGTATGTCTTTAACTCGGGTGTGTGTCTTGAATGCAGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1316009 371 + 1464242 TGTCT-TTGCC-CCTCCTTGGA----AAACAGTAGCCATTATCTTACAAACATGGAT---CCATTTTCCTTCTGC------------TCCATGTCTGTGCATTCCATATCCCATTTGAACAC-------------------------TAAAAACAGAAA--------------------------------------------------------------ACGTTGTTGAAACTGATTTAATTTCCAAT----ATGT-----G----GGCATTTGACAGGATAGTATTCTGAATAGATAATTCTCGTTAGTGATGTTGCTGTATGAATATTCATCCAGA-AGT---TTTCT-TTACATCTTTTAGAAGGAGGACTGGAAAATGCTCAGAATCCCAAAAGGCAAGGAAA----TGAAATCACAAACATCAGGTCTTTTTTTTTT-A------------ATGGAGAACCACGCACCAAGTATGTCTTTAACTCGGGTGTGTGTCTTGAATACAGG i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1375472 377 + 108979918 TGTCT-TTGCC-CCTCCTTGGA----AAACAGTAGCCGTTATCTTGCAAACGTGGAT---CCGTTTTCCTTCTGC------------TCCACGTCTGTGCTTTCCATATCCCGTGTGAACAC-------------------------CAAAAACAGAAA--------------------------------------------------------------ACGTTTGTGAATCTGATTTAATTCCCAAT----ATGT-----G----GGCATTTGACAGGATATTATTCTGAGCAGATAATTCTCATTGGTGATGTTGCTCTATGAATATTCATCCGGA-AGT---TTTCT-TTACGTCTTTTAGAAGGAGGACTGGAAAATGCTCAGAATCCCAAAAGGCAAGGAAA----TGAAATTACAAACATCATGTCtttttttttt-t--tttttt----ATGGAGAACCATGCACCAAGTATGTCTTTCACTCAGATGTGTGTCTTGAATGCAGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1347662 371 - 111193037 TGTCT-TTGCC-CCTCCTTGGA----AAACAGTAGCCGTTATCTTGCAAACGTGGAT---CCGTTTTCCTTCTGC------------TCCACGTCTGTGCTTTCCATATCCCATGTGAACAC-------------------------CAAAAACAGAAA--------------------------------------------------------------ACGTTTGTGAATCTGATTTAATTTCCAAT----ATGT-----G----GGCATTTGACAGGATATTATTCTGAGCAGATAATTCTCATTGGTGATGTTGCTCTATGAATATTCATCCGGA-AGT---TTTCT-TTACGTCTTTTAGAAGGAGGACTGGAAAATGCTCAGAATCCCAAAAGGCAAGGAAA----TGAAATTACAAACATCATGTCTTTTTTTTTT-T------------ATGGAGAACCATGCACCAAGTATGTCTTTCACTCAGATGTGTGTCTTGAATGCAGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1376139 377 + 3644372 TGTCT-TTGCC-CCTCCTTGGA----AAACAGTAGCCGTTATCTTGCAAACGTGGAT---CCGTTTTCCTTCTGC------------TCCACGTCTGTGCTTTCCATATCCCGTGTGAACAC-------------------------CAAAAACAGAAA--------------------------------------------------------------ACGTTTGTGAATCTGATTTAATTTCCAAT----ATGT-----G----GGCATTTGACAGGATATTATTCTGAGCAGATAATTCTCATTGGTGATGTTGCTCTATGAATATTCATCCGGA-AGT---TTTCT-TTACGTCTTTTAGAAGGAGGACTGGAAAATGCTCAGAATCCCAAAAGGCAAGGAAA----TGAAATTACAAACATCATGTCTTTTTTTTTT-T--TTTTTA----ATGGAGAACCATGCACCGAGTATGTCTTTCACTCAGATGTGTGTCTTGAATGCAGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1329983 379 - 10304083 TGTCT-TTGCC-CCTCCTTGGA----AAACAGTAGCCGTTATCTTGCAAACGTGGAT---CCGTCTTCCTTCTGC------------TCCATGTCTGTGCTTTCCATATCCCATGTGAACAC-------------------------CAAAAACAGAAA--------------------------------------------------------------ACGTTTGTGAATCTGATTTAATTTCCAAT----ATGT-----G----GGCATTTGACAGGATATTATTCTGAGCAGATAATTCTCATTGGTGATGTTGCTCTATGAATATTCATCCGGA-AGT---TTTCT-TTACGTCTTTTAGAAGGAGGACTGGAAAATGCTCAGAATCCCAAAAGGCAAGGAAA----TGAAATTACAAATATCATGTCtttttttttt-ttttttttt----ATGGAGAACCATGCACCGAGTATGTCTTTCACTCAGATGTGTGTCTTGAATGCAGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1401491 371 - 107702431 TGTCT-TTGCC-CCTCCTTGGA----AAACAGTAGCCGTTATCTTGCAAACATGGAT---CCATTTTCCTTCTGC------------TCCACGTCTGTGCTTTCCATATCCCATGTGAACAC-------------------------CAAAAAC--AAA--------------------------------------------------------------ACGTTTTTGAACCTGATTTAATTTCCAAT----ATGT-----G----GGCATTTGACAGGATATTATTCTGAGCAGATAATTCTCATTGGTGATGTTGCTCTATGAATATTCATCCAGA-AGT---TTTAT-TTACATCTTTTAGAAGGAGGACTGGAAAATGCTCAGAATCCCAAAAGGCAAGGAAA----TGAAATTACAAACATCCCGTCTTTTTTTTTT-T--TT--------ATGGAGAACCACGCACCGAGTATGTCTTTCACTCAGATGTGTGTCTTGAATGCAGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 878570 381 - 2200435 TGTCT-TTGTC-CCTCCTTGGA----AAACAGTAGCCGTTATCTTGCAAACGTGGAT---CCGTTTTCCTTCTGC------------TCCACGTCTGTGCTTTCCATATCCCATGTGAACAC-------------------------TAAAAACAGAAA--------------------------------------------------------------ACGTTTTTGAATCTGATTTAATTTCCAAT----ATGT-----G----GGCATTTGACAGGATATTATTCTGAGCAGATAATTCTCATTGGTGATGTTGCTCTATGAATATTCATCCGGA-AGT---TTTCT-TTACGTCTTTTAGAAGGAGGACTGGAAAATGCTCAGAATCCCAAAAGGCAAGGAAA----TGAAATTACAAACATCCTGTCtttttttttt-t--tttttttttAATGGAGAACCACGCATCGAGTATGTCTTTCACTCAGATGTGTGTCTTGAATGCAGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1317343 373 - 13651311 TGTCT-TTGCC-CCTCCTTGGA----AAACAGTAGCCGTTATCTTGCAAACGTGGAT---CCATTTTCCTTCTGC------------TCCACGTCTGTGCTTTCCATATCCCATGTGAACAC--------------------------AAAAACAGAAA--------------------------------------------------------------ACGTTTTTGAACCTGATTTAATTTCCAAT----ATGT-----G----GGCATTTGACAGGATATTATTCTGAGCAGATAATTCTCACTGGTGATGTTGCTCTATGAATATTCATCCGGA-AGT---TTTCT-TTACATCTTTTAGAAGGAGGACTGGAAAATGCTCAGAATCCCAAAAGGCAAGGAAA----TAAAATTACAAACATCACGTCTTTTTTTTTT-T--TTT-------ATGAAGAACCACGCACCGAGTATGTCTTTCACGCAGACGTGTGTCTTGAATGCGGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1326965 300 - 108792865 TGTCT-TTGCC-CCTCCTTGGA----AAACAGTAGCCATTATCTTACAAACATGGAT---CCATCTTCCTTCTGC------------TCCATGTCTGTGCATTCCATATCCCATTTA---AA-------------------------CAAAAAC--AAA--------------------------------------------------------------GCATTTTTGAACATGATTGAATTTCCAAT----ATAT-----G----GGCATTTGACAGGCTATTATTCTGAGTAGA--------------------------------------------------TTCT-------------------GTACTGGAAAATGCCCATAATCCCACGAGGCGAGGAAA----CGAAATTACAAACATTGCGTCTCTTTTAT---C------------ATGGAGAACCACACGCCGAATATGCCTTTAACTTGGATGTGCGTCTGGAATGCAGG i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1271363 353 + 1864846 TGTCT-TTGCC-CCTCCTTGAAAAACAAACAGTAGCCATTATTTTACAAACATGGAT---CCATTTTCCTTCTGC------------TCCATGTCTGTGCATTCCATATCCCATTTGAACAA-------------------------CAAAAACAGAAA--------------------------------------------------------------GCGTTTCTGAACATGATTGAATTTCCAAT----ATAT-----G----GGCATTTGACGGGCTATTAT--TGAGTAGATAATTCTCGTTAGTGATGTTGCTCTACGAATATTCATCTGGA-AGC---TTTCT-------------------GTACTGGAAAATGCCCATAATCCCACAAGATGAGGAAA----CGAAATTACAAACAGTGCGTCTCTTTTAT---C------------ATGGAGAACCACATACCAAATATGTTTTTAACTTGGATGTGTGTCTGGAATGCAGG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 59979 351 + 287728 TGCCT-TTGCC-CCTCCTTGAA----AAACAGCAGCCATTATCTCAGCAACATGGAT---CCGTTTTCCTTCTGC------------TCCATGTCTGTGCATTCCATATCCCATTTGAACAA-------------------------CAAAAACAGACA--------------------------------------------------------------GCGTCTTTGAACATGATTGAATTTCCAAT----ACAT-----G----GGCATTTGACAGGCTATTATTCTGAGTAGATAATTCTTGTTAGTGGTGTTGCTCTATGAATATTCATCCGGA-AGT---TTTCT-------------------GTACTGGAAAATGCCCATAATCCCACGAGGTGAGGAAA----CGAAATTACAAACATTGCGTCTCTTTTAT---C------------ATGGAGAACCACATGCCAAATATATGTTTAACTTGGATGTGTGTCTGGAATGCAGG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 908844 434 + 5252280 TGTCT-TTGCCTCCTCTGTAGA----AAACA----CTATAATCGTACCAACATGAATGAACCTATTTCCCTGTGttatatttatttatttatttttGTACATT--ATATCCCAATAAAATAAAACTTTCTCACTGATGAAGCACTAGTAAAAGTGAAAAATAT--------ATTATTT-------------------------TGGAAATTATCTTAGTCTATGTTACTGAGCCTGATTGAATTTATAAT----TTACTTACAA----AACATTTGGTAGAATGTCATTTTGAGAAGGTAATTCTCTTTAGTGATGTGGGTCCATAACATTTCCTCTCAA-AGTGTGTTTAT-TCACAT-TGTTAGGAGGAAGACTGGAAAATGCCTATAATCCTAAGAGGCAAGGAAA----TGATATTATGGGCACGTGGGCCTCCTTGT---T------------AGGGAACGCTGCACACCGGCTCTGCTTTGCATGTGGCTGAGTACC------ACAGG i otoGar3.GL873658 I 2 C 0 s mm10.chr12 89955977 354 - 120129022 TGCGTATTATC-TCTCATTATA----AA----------------CACAAAC----AC---TCATGTATCTTTTGT----------------------------------CTCATTTGAATAC-------------------------TAAGAACAGACGCTTT--CTACTGACTAAGTGTGAGTAAA----------------TGGGGAAAAGACTCATCCAAGTTATCAACCGTCGTTTAATTTACAATTCAAATAT-----G----GGTAC-------AAGATCATTCCAGATAGATCATTCCCATT-----TGTTTCTTGATAATTTTTTATCTTGATATT---TTTAT-TAACAATCTTCATGAGGAAGACTAG-GAATACCAATGACCCTAAAAGGCGAAAAAAAAAGTGAGATTAAGAGGAATTCATTGTATGTGT---C------------ATGGGATAGCACCC--------------CAACCCATTTGTGTGTCATGCCTTCAGA i mm10.chr12 I 1 C 0 s dasNov3.JH576208 1610437 406 + 4416731 TGT-T-TTGTC-TCCC----AA----AAGTAACAATGATTATCTTACAAACGTGAAC---CCATTTCCCTT-TGT------------TTCCTTTTCAGGTATTTTATATCCCATTTGAGCAA-------------------------TAAAAACAGAAAACTTTCTCATTGATGAAGTATTAGTAAAAGTGAAATAGATATTTTGGAAATTATTTCAATCCATGTATTTGAACATGATTTAATTCATAAT----GTAT-----GTATTAGCAATTGATGGACTATTATTTTTAATGGGCAAT-----------------------GAATATTCATCTTAA-AGT---TGTAAATTATATCTTCAAAGAGAAAGACTAAGAAATACCCATAATCCTAAAAGGTAAGGAGA----TAAAATTACAAATATTTCATCATTTTTAT---T------------AGGGAGGATTATGTACCAAGTCT-TTTGTTACTTGGTTATGTGTCTTGTATGCAGG i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1176366 2882 - 7082604 M e nomLeu3.chr19 1047190 100 + 81552678 M a score=755943.000000 s hg38.chr2_KI270774v1_alt 53780 87 + 223625 -----CTCT----------------GCTCATACAAAGCATGTGGGG------TTTTCACAACGCTGAGCCAGGAAAAATGACTAAACTCTGGCAGGAGGAAAAGCAACGAAACC s panTro5.chr2A 1330794 87 + 111504155 -----CTTT----------------GCTCATACAAAGCACGTGGGG------TTTTCACAACGCTGAGCCAGGAAAAATGACTAAACTCTGGCAGGAGGAAAAGCAAAGAAACC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1291480 87 + 114371477 -----CTTT----------------GCTCATACAAAGCACGTGGGG------TTTTCACAACGCTGAGCCAGGAAAAATGACTAAACTCTGGCAGGAGGAAAAGCAAAGAAACC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1316380 87 + 1464242 -----CTCT----------------GCTCATACAAAGCATGTGGGG------TTTTCACAACGCTGAGCTAGGAAAAATGACTAAACTCTGGCAGGAGGAAAAGCAACAAAACC i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1375849 87 + 108979918 -----CTTT----------------GCTCATACAGAGCACACGGGG------TTTTCACAACGCTGAGCCAGGAGAAATGAGTGAACTCTGGCAGGACGAAAAGCAGAGAAACC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1348033 87 - 111193037 -----CTTT----------------GCTCATACAGAGCACACGGGG------TTTTCACAACGCTGAGCCAGGAGAAATGAGTGAACTCTGGCAGGACGAAAAGCAGAGAAACC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1376516 87 + 3644372 -----CTTT----------------GCTCATACAGAGCACACGGGG------TTTTCACAACGCTGAGCCAGGAGAAATGAGTGAACTCTGGCAGGACGAAAAGCAGAGAAACC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1330362 87 - 10304083 -----CGTT----------------GCTCGTACCGAGCACACGGGG------TTTTCACAACGCTGAGCCAGGAGAAATGACTGAACTCTGGCAGGATGAAAAGCAGAGAAACC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1401862 87 - 107702431 -----CTTT----------------GCTCGTACAAAGCACACGGGG------TTTTCACAATGCTGAGCCAGGAAAAATGACTGAACTCTGGCAGGACGAAAAGCAGAGAAACT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 878951 87 - 2200435 -----CTTT----------------GCTCGTACAAAGCACACGGGG------TTTTCACAACGCTGAGCCGGGAGAAATGACTGAACTCTGGCAGGACGAAAAGCAGAGAAACC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1317716 87 - 13651311 -----CTTT----------------GCTGGTACAAAGCACACGGGG------TTTTCACAGCACTGAGCCGGGAGAAATGACTGAACTCTGGCAGGACGAAAAGCAAAGAAACC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1327265 86 - 108792865 -----CTTT----------------GCTTGTACAAAACACGTGGGT------TTTTCACAACGCTGAGCCAGGAAAAATGACTAAAGTCTGACA-GAGGAAAAGTAAAAAAACC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1179248 86 - 7082604 -----CTTT----------------GTTCGTACAAAGCACGTGGGT------TTTTCACAACGCTGAGCCAGGAAAAATGACTAAACTCTGACA-GAGGAAAAGCAAAGAAACT i saiBol1.JH378218 M 2882 C 0 s cebCap1.NW_016107827v1 1271716 84 + 1864846 -----CTTT----------------GCTCGTACAAAGCACATGGGT------TTTTCACAACACTGAGCCAGGAAAAATGACTAAACTCTGAC---AGGAAAAGCAAAGAAACC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 60330 86 + 287728 -----CTTT----------------GCTTGTACAAAGCACGTGGGT------TTTTCACAACGAAGAGCCGGGAAAAATGACTAAACTCTGACA-GAGGAAGAGCAAAGAAACC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 909278 64 + 5252280 -----CCCT----------------GCTTGAACAAAGCACATTGGG------TTTCCA---------------------GGCTGAGCTCTGACAGG--GAAAAGCAAAGAAAAC i otoGar3.GL873658 C 0 I 3 s mm10.chr12 89956331 103 - 120129022 -----CTTCAGAGTGGGCTTGTGCAGCTCATGCACAGCACCTTAGA------TTTTAACAAAGTAAAGCTAGCAGACATGATTGGACTCTGTTACAGAGGGAAGAAATAACCCC i mm10.chr12 C 0 I 6 s dasNov3.JH576208 1610843 78 + 4416731 TTGTGCTTT----------------GTAAAAAAAAAAAAAAGGGGGGGGGGCGGTTAACAACTCTGAGTGAGCAGAAATGATTAATCTCTATTA-------------------- i dasNov3.JH576208 C 0 C 0 e nomLeu3.chr19 1047190 100 + 81552678 M a score=479021.000000 s hg38.chr2_KI270774v1_alt 53867 49 + 223625 TCTAG---AGAAGATCAGGGGAGACACAATTG--CAGCTCAAAGTTAGAGTCTC s panTro5.chr2A 1330881 49 + 111504155 TCTAG---AGAACATCAGGGGAGACACAATTG--CAGCTCAAAGTTAGAGTCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1291567 49 + 114371477 TCTAG---AGAACATCAGGGGAGACACAATTG--CAGCTCAAAGTTAGAGTCTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1316467 49 + 1464242 TCTAG---AGAACATCAGGGGAGACACAATTG--CAGCTCAAAGTTAGAGTCTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1047290 47 + 81552678 TCTAG---AGAAGATCAGGTGAGACACAATTG--CAGCTCAAAGTT--AGTCTC i nomLeu3.chr19 M 100 C 0 s rheMac8.chr13 1375936 49 + 108979918 TTTAG---AAAAGATCAGGTGAGACACAATTA--CAGCTCAAAGTTAGAGTCTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1348120 49 - 111193037 TTTAG---AAAAGATCAGGTGAGACACAATTA--CAGCTCAAAGTTAGAGTCTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1376603 49 + 3644372 TTTAG---AAAAGATCAGGTGAGACACAATTA--CAGCTCAAAGTTAGAGTCTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1330449 49 - 10304083 TTTAG---AAAAGATCAGGTGAGACACAATTA--CAGCTCAAAGTTAGAGTCTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1401949 47 - 107702431 TTTAG---GAAAGATCAGGTGAG--ACAATTA--CAGCTCAAAGTTAGAGTCTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 879038 49 - 2200435 TTTAG---AAAAGATCAGGTGAGACACAATTA--CAGCTCAAAGTTAGAGTCTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1317803 49 - 13651311 TTCAG---AAAAGATCAGGTGAGACACGATTA--CAGCTCAAAGTTCGAGTCTC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1327351 49 - 108792865 TCTAC---GAAAGATCAGGCGAGACACAATCA--CAGCTCAAAGTTTGAGACTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1179334 51 - 7082604 TCTAG---AAAAGATCAGGTGAGACACAATCATTCAGCTCAAAGTCTGAGTCCT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1271800 47 + 1864846 TCTAG---GAAAGATCAGGTGAGACACAAT----CAGCTCAAAGTTTGAGTCTT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 60416 45 + 287728 TCTAG---GAAAGATCCAGTGAGACACAATCA--CA----AAAGCTGGAGTCTT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 909345 42 + 5252280 ATTAG---AAAAGGCCAGGAGAG-TACAGTCA--CCGCACAGAATTAG------ i otoGar3.GL873658 I 3 C 0 s mm10.chr12 89956440 52 - 120129022 TTTAGAAAAAAAAATCAGTTGAGGCATAATTT--CAAATCAACACTACGGTCTC i mm10.chr12 I 6 C 0 s dasNov3.JH576208 1610921 45 + 4416731 ---AG---AAAAGAACTGGATAGATACAATT---CAACCCAAAATTATGATCTC i dasNov3.JH576208 C 0 M 216 a score=802067.000000 s hg38.chr2_KI270774v1_alt 53916 96 + 223625 CAGCCACAGGGTACAAACAGATCTTTCAAGAGCAGAACTGGATTTGCAAAGCCCAGAGA-------TTATTCTG------------------------CAGAAGGATAGCCTCTGTGGAAA--AGAGAT s panTro5.chr2A 1330930 96 + 111504155 CAGCCACAGGGTACAAACAGATCTTTCAAGAGCAGAACTGGATTTGCAAAGCCCAGAGA-------TTATTCTG------------------------CAGAAGGATAGCCTCTGTGGAAA--AGAGAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1291616 96 + 114371477 CAGCCACAGGGTACAAACAGATCTTTCAAGAGCAGAACTGGATTTGCAAAGCCCAGAGA-------TTATTCTG------------------------CAGAAGGATAGCCTCTGTGGAAA--AGAGAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1316516 96 + 1464242 CAGCCACAGGGTACAAACAGATCTTTCAAGAGCAGAACTGGATTTGCAAAGCCCAGAGA-------TTATTCTG------------------------CAGAAGGATAGCCTCTGTGGAAA--AGAGAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1047337 98 + 81552678 CAGCCATCGGGTACAAACAGATTTTTCAAGAGCAGAACTGGATTTGCAAAACCCAGAGA-------TTATTCTG------------------------CAGAAGGATAGGCTCTGTGGAAAAGAGAGAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1375985 96 + 108979918 CAGCCACTGGGTGCAAACAGATTTTTCAAGAGCGGAACTGGATTTGCAAAGCCCAGAGA-------TTATTCTG------------------------CAGAAGGATAGGCTCCGTGGAAA--AAAGAG i rheMac8.chr13 C 0 I 282 s macFas5.chr13 1348169 96 - 111193037 CAGCCACTGGGTGCAAACAGATTTTTCAAGAGCGGAACTGGATTTGCAAAGCCCAGAGA-------TTATTCTG------------------------CAGAAGGATAGGCTCCGTGGAAA--AAAGAG i macFas5.chr13 C 0 I 282 s macNem1.NW_012011978v1 1376652 96 + 3644372 CAGCCACTGGGTGCAAACAGATTTTTCAAGAGCGGAACTGGATTTGCAAAGCCCAGAGA-------TTATTCTG------------------------CAGAAGGATAGGCTCCGTGGAAA--AAAGAG i macNem1.NW_012011978v1 C 0 I 280 s cerAty1.NW_012000820v1 1330498 96 - 10304083 CAGCCACTGGATGCAAACAGATTTTTCAAGAGCAGAACTGGATTTGCAAAGCCCAGAGA-------TTATTCTG------------------------CAGAAGGATAGGCTCTGTGGAAA--AAAGAG i cerAty1.NW_012000820v1 C 0 I 280 s chlSab2.chr14 1401996 92 - 107702431 CAGCCACTGGGT----ACAGATTTTTCAAGAGCAGAACTGGATTTGCAAAGCCCAGAGA-------TTATTCTG------------------------CAGAAGGATAGGCTCCGTAGAAA--AAAGAG i chlSab2.chr14 C 0 I 2 s manLeu1.NW_012103754v1 879087 96 - 2200435 CAGCCACTGGGTGCAAACAGATTTTTCAAGAGCAGAACTGGATTTGCAAAGCCCAGAGA-------TTATTCTG------------------------CAGAAGGATAGGCTCCGTGGAAA--AAAGGG i manLeu1.NW_012103754v1 C 0 I 271 s colAng1.NW_012118821v1 1317852 96 - 13651311 CAGCCACTGGGTACAAACAGATTTTTCAAGAGCAGAGCTGGATTTGCAAAGCCCAGAGA-------TGATTCTG------------------------CAGAACGATCGGCTCCATGGAAA--AAAGAG i colAng1.NW_012118821v1 C 0 I 2 s calJac3.chr14 1327400 83 - 108792865 CAGCCACAGGGT----ACAGACTTTTCAAGAGCAGAACTCGATTTGCAAAGCCCAGAGA-------TTATTCTG------------------------CAGAAGGA---------TGGAAG--AGAGAG i calJac3.chr14 C 0 I 4 s saiBol1.JH378218 1179385 111 - 7082604 CAGCCGCAGGGTACAAACAGACTTTTCAAGAGCAGAACTGGATTTGCAAAGCCCAGAGA-------TTATTCTGCAGAAGGATAGGCTCTTCCATCCTCAGAAGGA---------TGGAAG--AAAGAG i saiBol1.JH378218 C 0 I 4 s cebCap1.NW_016107827v1 1271847 109 + 1864846 CAGCCACAGGGTACAAACAGACTTTTCAAGAGCAGAACTGGATTTGCAAAGCCCAGAGA-------TTATTCCGCAGAAGGGTAGGCTTTTCCATCCTCAGAAGGA---------TGGAAG--AA--AG i cebCap1.NW_016107827v1 C 0 I 4 s aotNan1.NW_018513311v1 60461 87 + 287728 CAGCCACAGGGTACAAGCAGACTTTTCAAGAGCAGAACTGGATTTGCAAAGCCCAGAGA-------TTATTCTG------------------------CAGAAGGA---------TGGAAG--AAAGAG i aotNan1.NW_018513311v1 C 0 I 4 s otoGar3.GL873658 909387 46 + 5252280 --GCTCCCAGGTACAAACA-----TTTCAGAGTGGAAACTGATTTGAAAAGAC---------------------------------------------------------------------------- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89956492 83 - 120129022 AAGCCAATGTGTAAAAACAGGTTTCAAAACATGTAAGCTAGATCTTAAAAG---AGAGAAATATATAAATTTCA------------------------TAG--------------TGGTTT--AAA--- i mm10.chr12 C 0 C 0 e dasNov3.JH576208 1610966 216 + 4416731 M a score=976875.000000 s hg38.chr2_KI270774v1_alt 54012 103 + 223625 AGAAATTAACCTAGCAGTGGTTTGTGACA--GAAGACAGTTTA-CACAATGAGGTCCAGTTTTATTGAGAATGAGA-CTTACAGCAAGTAGTTCTGAACATTAGGAA s panTro5.chr2A 1331026 103 + 111504155 AGAAATTAACCTAGCAGTGGTTTGTGACG--GAAGACAGTTTA-CACAATGAGGTCCAGTTTTATTGAGAATGAGA-CTTACAGCAAGTGGTTCTGAACATTAGGAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1291712 103 + 114371477 AGAAATTAACCTAGCAGTGGTTTGTGACG--GAAGACAGTTTA-CACAATGAGGTCCAGTTTTATTGAGAATGAGA-CTTACAGCAAGTGGTTCTGAACATTAGGAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1316612 103 + 1464242 AGAAATTAACCTAGCAGTGGTTTGTGACG--GAAGACAGTTTA-CACAATGAGGTCCAGTTTTATTGAGAATGAGA-CTTACAGCAAGTAGTTCTGAACATTAGGAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1047435 103 + 81552678 AGAAATTAACCTAGCAGTGGTTTGTGATG--GAAGACAGTTTA-CACAATGAGGTCTGGTTTTATTGAGAATGAGA-CTTACAGCAAGTAGTTCTGAACATTAGGAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1376363 99 + 108979918 agaaaTTAACCTAGTGGTGGGTTGTGACA--GAAGACAGTTAA-CACAGTGAGGTCCAGTTTTATTGAGAATGAG-----ACAGCAAGTGGTTTTGAACATTAGGAA i rheMac8.chr13 I 282 C 0 s macFas5.chr13 1348547 99 - 111193037 agaaaTTAACCTAGTGGTGGGTTGTGACA--GAAGACAGTTAA-CACAGTGAGGTCCAGTTTTATTGAGAATGAG-----ACAGCAAGTGGTTTTGAACATTAGGAA i macFas5.chr13 I 282 C 0 s macNem1.NW_012011978v1 1377028 98 + 3644372 agaaaTTAACCTAGTGGTGGGTTGTGACA--GAA-ACAGTTAA-CACAGTGAGGTCCAGTTTTATTGAGAATGAG-----ACAGCAAGTGGTTTTGAACATTAGGAA i macNem1.NW_012011978v1 I 280 C 0 s cerAty1.NW_012000820v1 1330874 99 - 10304083 agaaaTTAACCTAGCGGTGGGTTGTGACA--GAAGACAGTTAA-CACAGTGAGGTCCAGTTTTATTGAGAATGAG-----ACAGCAAGTGGTTTTGAACATTAGGAA i cerAty1.NW_012000820v1 I 280 C 0 s chlSab2.chr14 1402090 99 - 107702431 AGAAATTAACCTAGCGGTGGGTTGTGACA--GAAGACAGTTAA-CACAGTGAGGTCCAGTTTTATTGAGAATGAG-----ACAGCAAGTGGTTTTGAACATTAGGAA i chlSab2.chr14 I 2 C 0 s manLeu1.NW_012103754v1 879454 99 - 2200435 agaaaTTAACCTAGCGGTGGGTTGTGACA--GAAGACAGTTAA-CACAGTGAGGTCCAGTTTTATTGAGAATGAG-----ACAGCAAGTGGTTTTGAACATTAGGAA i manLeu1.NW_012103754v1 I 271 C 0 s colAng1.NW_012118821v1 1317950 97 - 13651311 AGAAATTAACCTAGCGGTGGGTTGTGACA--GAAGACAGTGAA-CACAGTGAGGTCCAGTTTTACTGAG--TGAG-----ACAGCAAGTGGTTTTGAACATTAGGAA i colAng1.NW_012118821v1 I 2 C 0 s calJac3.chr14 1327487 97 - 108792865 GGAAATTAACCTAGCAGTGGGTTGTGATA--GAACACAGCTAA-CACAATGAAGTCCAGTTTTATTGAGA-------CTTATAGCAAGTAGTTTTGAACATTAGGAA i calJac3.chr14 I 4 C 0 s saiBol1.JH378218 1179500 104 - 7082604 GGAAATTAACCTAGCAGTGGGTTGTGATA--GAAGACAGCTAA-TACAATGAAGTCCAGTTTTATTGAGATCGAGACTTAACAGCAAGTAGTTTTGAACACTAGGAA i saiBol1.JH378218 I 4 C 0 s cebCap1.NW_016107827v1 1271960 101 + 1864846 GGAAATTAACCTAGCAGTGGGTTGTGATA--GAAGACAGCTAA-CACAATGAAGTCCAGTTTTATTGAGATTGAGA-CTTACAGAAAGTAGTTTTGAACATTAGG-- i cebCap1.NW_016107827v1 I 4 C 0 s aotNan1.NW_018513311v1 60552 104 + 287728 GGAAATTAACCTAGCAGTGGGTTGTGACA--GAAGACAGCTAA-CACAATGAAGTCCAGTTTTACTGAGATTGAGACTTAACAGCAAATAGTTTTGAACATTAGGAA i aotNan1.NW_018513311v1 I 4 C 0 s otoGar3.GL873658 909433 99 + 5252280 AGAGGCGAATGTAGCAGTGGGTTGCGGTG--GA--GCAGCTCAGCACAGTATGGGTCCGTTTTA--GGGGATGAGAGC--CAAGCAAGGCATTTTGAGCACTAGGAA i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89956575 106 - 120129022 AAAAAAAAACCTTGCCACTTTTGGTAACCCTGATGATTGGTCACCATATCAGGGTTAAATTTTAGTAAGAATGAAA-TGCATAGCAAATAGTTTTTAACACTGGGAA i mm10.chr12 C 0 I 3538 e dasNov3.JH576208 1610966 216 + 4416731 M a score=1452847.000000 s hg38.chr2_KI270774v1_alt 54115 152 + 223625 CCATATTTTTAAATGACT--CGTGAACTTTATTTTTCTCA-TTTTATGGTCTGAATTTTAGTGAACTTCAAGAACATTTTAGTTTTCAAAGGAAAAAAGCTCTAACTAAATAAATTTGATTACAG--A--AAAATAAAACATTCTCAGCATATAAACAA s panTro5.chr2A 1331129 152 + 111504155 CCATATTTTTAAATGACT--CGTGAACTTTATTTTTCTCA-TTTTATGGTCTGAATTTTAGTGAACTTCAAGAACATTTTAGTTTTCAAAGGAAAAAAGCTCTAACTAAATAAATTTGATTACAG--A--AAAATAAAACATTCTCAGCATATAAACAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1291815 152 + 114371477 CCATATTTTTAAATGACT--CGTGAACTTTATTTTTCTCA-TTTTATGGTCTGAATTTTAGTGAACTTCAAGAACATTTTAGTTTTCAAAGGAAAAAAGCTCTAACTAAATAAATTTGATTACAG--A--AAAATAAAACATTCTCAGCATATAAACAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1316715 152 + 1464242 CCATATTTTTAAATGACT--CGTGAACTTTATTTTTCTCA-TTTTATGGTCTGAATTTTAGTGACCTTCAAGAACATTTTAGTTTTCAAAGGAAAAAACCTCTAACTAAATAAACTTGATTACAG--A--AAAATAAAACATTCTCAGCATATAAACAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1047538 154 + 81552678 CCATATTTTTAAATGACTCACGTGAACTTTATTTTTCTCA-TTTTATGGTCTGAATTTTAGTGACCTTCAAGAACATTTTAGTTTTCAAAGGAAAAAAGCTCTAACTAAATAAATTTGATTACAG--A--AAAATAAAACATTCTCAGCGTATAAGCAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1376462 156 + 108979918 TCATATTTTTAAATGACTCACGTGAACTTTATTTTTCTCA-TTTTATGGTCTGAATTTCAGTGAATTCCAAGAACATTTTAGTTATCAAAGGATAAAATATCTAACTAAATGAATTTCACTACAG--AAGAAAATAAAACATTCTCAGCATATAAACAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1348646 156 - 111193037 TCATATTTTTAAATGACTCACGTGAACTTTATTTTTCTCA-TTTTATGGTCTGAATTTCAGTGAATTCCAAGAACATTTTAGTTATCAAAGGATAAAATATCTAACTAAATGAATTTCACTACAG--AAGAAAATAAAACATTCTCAGCATATAAACAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1377126 156 + 3644372 TCATATTTTTAAATGACTCACATGAACTTTATTTTTCTCA-TTTTATGGTCTGAATTTCAGTGAATTCCAAGAACATTTTAGTTATCAAAGGATAAAATATCTAACTAAATGAATTTCACTACAG--AAGAAAATAAAACATTCTCAGCATATAAACAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1330973 156 - 10304083 TCATATTTTTAAATGACTCATGTGAACTTTATTTTTCTCA-TTTTATGGTCTGAATTTCAGTGAATTCCAAGAACATTTTAGTTATCAAAGGATAAAATATCTAACTAAATGAATTTCACTACAG--AAGAAAATAAAACATTCCCAGCATATAAACAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1402189 157 - 107702431 TCATATTTTTAAATGACTCACATGAACTTTATTTTTCTCATTTTTATGGTCTGAATTTCAGTGAATTCCAAGAACATTTTAGTTATCAAAGGATAAAATATCTAACTAAATGAATTTCACCACAG--AAGAAAATAAAACATTCTCAGCATATAAACAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 879553 156 - 2200435 TCATATTTTTAAATGACTCATGTGAACTTTATTTTTCTCA-TTTTATGGTCTGAATTTCAGTGAATTCCAAGAACATTTTAGTTATCAAAGGATAAAATATCTAACTAAATGAATTTCACTACAG--AAGAAAATAAAACATTCCCAGCATATAAACAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1318047 156 - 13651311 TCATATATTTAAATGACTCACGTGAACTTTATTTTTCTCA-TTTTATGGTCTGAATTTCAGTGACATCCAAGAACATTTTAGTTATCAAAGGATAAAATATCTAACTAAATGAATTTCACTACAG--AAGAAAATAAAACATTCTCAGCATCTAAACAA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1327584 152 - 108792865 TAATATTTTTCAATGACTCACATGAACTTTATTTTTCTCA-TTTTATGGTCTGAATTTTAGTGACTTTCAACAACACTGTAGTTTTCAAAGGAAAAAAGAT----CTAAATGAATTTGATTACAG--AAAAAAATAAAACATCCTCGGCATGTAAACAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1179604 152 - 7082604 TAATATTTTTCAATGACTTACGTGAACTTTATTTTTCTCA-TTTTATGGTCTGAATTTTAGTGACCTTCAAGAACATTGTAGTTATCAAAGGAAAAAAGAT----CTAAATGAATTTGATTACAG--AAGAAAATAAAACATCCACAGCATGTAAACAA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1272061 151 + 1864846 -AATATTTTTCAATGACT--CCTGAACTTTATTTTTCTCA-TTTTATGGTCTGAATTTTAGTGACCTTCAAGAACATTGTAGTTAACAAAGGAAAAAAGAT----CTAAATGAATTTGATTACAGAAAAAAAAATAAAACATCCTCAGCACGTAAACAA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 60656 152 + 287728 TAATATTTTTCAATGACTCACGTGAACTTTATTTTTCTCA-TTTTGTGGTCTGAATTTTAGTGACCTTCAAAAACACTGTTGTTATCAAAGGAAAAATGAT----CTAAATGAATTTGATTACAG--AAAAAAATAAAACATCCTCAGCATGTAAACAA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 909532 149 + 5252280 CGA-AGCTCTGAATGGTTCATGTGAACTTTACTTTTCTCA-TCTCATTATCTGTATTTTAGCGGCCTCAGAGCACATACCAGTTATCAAAGAAAGAAAGAT----GTAATTACATTTGACTCCAG--AATTTAGAAAACC--TGTGGGAACATAAACAA i otoGar3.GL873658 C 0 C 0 e mm10.chr12 89956681 3538 - 120129022 I e dasNov3.JH576208 1610966 216 + 4416731 M a score=3600.000000 s hg38.chr2_KI270774v1_alt 54267 1 + 223625 -G s panTro5.chr2A 1331281 1 + 111504155 -G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1291967 1 + 114371477 -G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1316867 1 + 1464242 -G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1047692 1 + 81552678 -G i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1376618 1 + 108979918 -G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1348802 1 - 111193037 -G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1377282 1 + 3644372 -G i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1331129 1 - 10304083 -G i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1402346 1 - 107702431 -G i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 879709 1 - 2200435 -G i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1318203 1 - 13651311 -G i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1327736 1 - 108792865 -g i calJac3.chr14 C 0 I 387 s cebCap1.NW_016107827v1 1272212 1 + 1864846 -G i cebCap1.NW_016107827v1 C 0 I 12 s aotNan1.NW_018513311v1 60808 1 + 287728 -G i aotNan1.NW_018513311v1 C 0 I 114 s otoGar3.GL873658 909681 1 + 5252280 T- i otoGar3.GL873658 C 0 C 0 e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1179756 0 - 7082604 C e dasNov3.JH576208 1610966 216 + 4416731 M a score=99247.000000 s hg38.chr2_KI270774v1_alt 54268 16 + 223625 TTTCTCCAAATCTTAC-- s panTro5.chr2A 1331282 16 + 111504155 TTTCTCCAAATCTTAC-- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1291968 16 + 114371477 TTTCTCCAAATCTTAC-- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1316868 16 + 1464242 TTTCTCCAAATCTTAC-- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1047693 16 + 81552678 TTTCTCCAAATCTTAC-- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1376619 16 + 108979918 TTTCTCCAAATCTTAC-- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1348803 16 - 111193037 TTTCTCCAAATCTTAC-- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1377283 16 + 3644372 TTTCTCCAAATCTTAC-- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1331130 16 - 10304083 TTTCTCCAAATCTTAC-- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1402347 16 - 107702431 TTTCTCCAAATCTTAC-- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 879710 16 - 2200435 TTTCTCCAAATCTTAC-- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1318204 16 - 13651311 TTTCTCCAAATCTCAC-- i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 909682 18 + 5252280 TCTTTCAGAATCTCTCAG i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 60809 114 + 287728 I e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1179756 0 - 7082604 C e cebCap1.NW_016107827v1 1272213 12 + 1864846 I e dasNov3.JH576208 1610966 216 + 4416731 M e calJac3.chr14 1327737 387 - 108792865 I a score=3727625.000000 s hg38.chr2_KI270774v1_alt 54284 654 + 223625 TTTCAGTATTAAGTTGAA--CTCGGTGTGTTTGAATATGAGACAGCGATCAGCAAATGCCTTGTAACAATCGTCCAATCACTGATACCGCCCATGACCCGTTGTTTGCGTTCTCAGCCTATTTTCATGTGTTTCTTGACTGTTTTCTTCCTCCAGGACTCCCTGCGTATCACAGCAGT-GCCAGAGGAATCACGGCAGTTAGCCGGAAAGCT-AGTTTACCCCTCCGGGCCC----ATAGTTCTTGGGAACTGATGTTC-AGCT-CTTCTGATTTGCTGACAGCTTCTCATAAATGTATAACCACGAAT--CCTGCCCTGCC---CTTGCTGGTGGAGGGA-CCATTTGATTATTGTCCATTCAGACAGATAAAACTTAGGACAGGATTTTTCAAAACAGATA----TAAGATGGAGAACATTTCCATGTTGTTCTGGTTTGCTGCTTTCAGTGTTTGGGACAAGAG-ATAGACAGGTGGAGGGTACATAACCCCTCCCCCGATGCCCACAATCCCCACAGGTTTCCGACCTGACTTTTAAATACAGTTGTCAGCACACTGGCTGTCAAAACCAGAGGAGCCAAGGCTTGGAAGACTGTTGGCTTAGGAGTTGGGAGAACTCTGTGTCC--TTTCTGAGGTGACCACAAGCAAGTT------------------TAAACCCGTGTG-AAGAATTTA s panTro5.chr2A 1331298 649 + 111504155 TTTCAGTATTAAGTTGAA--CTCGGTGTGTTTGAATATGAGACAGCGATCAGCAAATGCCTTGTAACAATCGTCCAATCACTGATACCGCCCATGACCCATTGTTTGCATTCTCAGCCTATTTTCATGTGTTTCTTGACTGTTTTCTTCCTCCAGGACTCCCCGCGTATCACAGCAGT-GCCAGAGGAATCACGGCAGTTAGCCGGAAAGCT-AGTTTACCCCTCCGGGCCC----ATAGTTCTTGGGAACTGATGTTC-AGCT-CCTCTGATTTGCTGACAGCCTCTCATAAATGTATAACCACGAAT--CCTGCCCTGCC---CTTGCTGGTGGAGGGA-CCATTTGATTATTGTCCATTCAGACAGATAAAACTTAGGACAGGATTTTTCAAAACAGATA----TAAGATGGAGAACATTTCCATGTTGTTCTGGTTTGCTGCTTTCAGTGTTTGGGACAAGAG-AT----AGGTGGAGGGTACATAACCCCTCCCCCGACGCCCACAATCCCCGCA-GTTTCCGACCTGCCTTTTAAATACAGTTGTCAGCACACCGGCTGTCAAAACCAGAGGAGCCAAGGCTTGGAAGACTGTTGGCTTAGGAGTTGGGAGAACTCTGTGTCC--TTTCTGAGGTGACCACAAGCAAGTT------------------TAAACCCGTGTG-AAGAATTTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1291984 643 + 114371477 TTTCAGTATTAAGTTGAA--CTCGGTGTGTTTGAATATGAGACAGCGATCAGCAAATGCCTTGTAACAATCGTCCAATCACTGATACCGCCCATGACCCATTGTTTGCATTCTCAGCCTATTTTCATGTGTTTCTTGACTGTTTTCTTCCTCCAGGACTCCCCGCGTATCACAGCAGT-GCCAGAGGAATCACGGCAGTTAGCCGGAAAGCT-AGTTTACCCCTCCGGGCCC----ATAGTTCTTGGGAACTGATGTTC-AGCT-CCTCTGATTTGCTGACAGCCTCTCATAAATGTATAACCACGAAT--CCTGCCCTGCC---CTTGCTGGTGGAGGGA-CCATTTGATTATTGTCCATTCAGACAGATAAAACTTAGGACAGGATTTTTCAAAACAGATA----TAAGATGGAGAACATTTCCATGTTGTTCTGGTTTGCTGCTTTCAGTGTTTGGGACAAGAG-AT----AGGTGGAGGGTACATAACCCCTCCCCCGACGCCCACAATCCCCGCA-GTTTCCGACCTGCCTTTTAAATACAGTTGTCAGCACACCGGCTGTCAAAACCAGAGGAGCCAAGGCTTGGAAGACTGTTGGCTTAGGAGTTGGGAGAAC------TCC--TTTCTGAGGTGACCACAAGCAAGTT------------------TAAACCCGTGTG-AAGAATTTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1316884 653 + 1464242 TTTCAGTATTAAGTTGAA--CTCGGTGTGTTTGAATATGAGACAGCGATCAGCAAATGCCTTGTAACAATCGTCCAATCACTGATACCGCCCATGACCCGTTGTTTGCATTCTCAGCCTATTTTCATGTGTTTCTTGACTGTTTTCTTCCTCCAGGACTCCCCGCGTATCACAGCAGT-GCCAGAGGAATCCCGGCAGTTAGCCGGAAAGCT-AGTTTACCCCTCCAGGCCC----ATTGTTCTTGGGAACTGATGTTC-AGCT-CCTCTGATTTGCTGACAGCCTCTCATAAATGTATAACCATGAAT--CCTGCCCTGCC---CTTGCTGGTGGAGGGA-CCATTTGATTATTGTCCATTCAGACAGATAAAAGTTAGGACAGGATTTTTCAAAACAGATA----TAAGATGGAGAACATTTCCATGTTGTTCTGGTTTGCTGCTTTCAGTGTTTGGGACAAGAG-ATAGACAGGTGGAGGTTACATAACCCCTCCCCCGACGCCCACAATCCCCGCA-GTTTCGGACCTGCCTTTTAAATACATTTGTCAGCACACCGGCTGTCAAAAGCAGAGGAGCCAAGGCTTGGAAGACTGTTGGCTTAGGAGTTGGGAGAACTCTGTGTCC--TTTCTGAGGTGACCACAGGCAAGTT------------------TAAACCCGTGTG-AAGAattta i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1047709 645 + 81552678 TTTCAGTAGTAAGTTGAA--CTCGGTGTGTTTGAATATGAGACAGCGATCAGCAAATGCCTTGTAACAATCGTCCAATCACTGATACCGCCCATGTCCCATTGTTTGCATTCTCAGCCTATTTTCATGTGTTTCTTGACTGTTTTCTTCCTCCAGGACTCCTCGCGTATCACGGCAGT-GCCAGAGGAATCCCGGCAGTTAGCCGGAAAGCT-AGTTTACCCCTCTGGGCCC----ATAGTTCTTGGGAACT--------AGCT-CCTCTGATTTGCTGACAGCCTCTCATAAATGTATAACCACGAAT--CCTGCCCTGCC---CTTGCTGGTGGAGGGA-CTATTTGATTATTGTCCATTC-GACAGATAAAAGTTAGGACAGGATTGTTCAAAACAGGTA----TAAGATGGAGAACATTTCCATGTTGTTCTGGTTTGCTCCGTTCATTGTTTGGGGCAAGAG-ATAGACAGGTGGAAGGTACATAACCCCTCCCCCGACGCCCACAATCCCCACAGGTTTCCCACCTGCCTTTTAAATGCAGTTGTCAGCACACCGGCTGTCAAAAGCAGAGGAGCCGAGGCTTGGCAGACTGTTGGCTTAGGGGTTGGGAGAACTCTGTGTCC--TTTCTGAGGTGACCACA-GCAAGTT------------------TAAACCCGTGTG-AAGAATTTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1376635 639 + 108979918 TTTCAGTGTTTAGTTGAA--CTCTGTGTGTTTGAATATGAGACACCAGTCAGCAAATGCCTTCTAACAATCGTCCAGTCACTGATACTGCCCAGGACCTGCTGTTTGCATTCTCAGCCTATTTTCATGTGTTTCTTGACTG-TTTCTTCCTCCAGGACTCCCCGCGTATCACAGCAGT-GCCAGAGGAATCCCAGCAGTCAGCCGGAAAGCT-AGTTTACCCCTCCGGGCCC----ATAGTTCATGGGAACTGATGTTC-AGCT-CCTCTGAT--------AGCCTCTCATAAATGTACAACCATGAAT--CCTGCTCTGCC---CTTGCTGGTGGAGGGA-CCATTTGATTGTTGTCCTTTCAGACAGATAAAAGTTAGGGCGGGGTTTTTCAAAACAGATA----CAAGATGGAGAACATTTCCA---TGTTCT-GTTTGCTCCTTTCAGTGTTTGGGACAAGAG-ATAGACAGGTGGAGAGTACATAACCCCTCCCCCAACACCCACAACCCCCGCAGGTTTCCAACCTGCCTTGTAAATACTGTTGTCAGCACACAGGCTGTCAAAAGCAGAGGAGCCGAGGCTTGGAAGACTGTTGGCTTAGGAGTTGGGAGAACTCTA--TCC--TTTCTGAGGTGACCACAAGCAAGTT------------------TAAACCCGTGTG-AAGAATGTA i rheMac8.chr13 C 0 I 314 s macFas5.chr13 1348819 640 - 111193037 TTTCAGTGTTTAGTTGAA--CTCTGTGTGTTTGAATATGAGACACCAGTCAGCAAATGCCTTCTAACAATCGTCCAGTCACTGATACTGCCCAGGACCTGCTGTTTGCATTCTCAGCCTATTTTCATGTGTTTCTTGACTGTTTTCTTCCTCCAGGACTCCCCGCGTATCACAGCAGT-GCCAGAGGAATCCCGGCAGTCAGCCGGAAAGCT-AGTTTACCCCTCCGGGCCC----ATAGTTCATGGGAACTGATGTTC-AGCT-CCTCTGAT--------AGCCTCTCATAAATGTACAACCATGAAT--CCTGCTCTGCC---CTTGCTGGTGGAGGGA-CCATTTGATTGTTGTCCTTTCAGACAGATAAAAGTTAGGGCGGGGTTTTTCAAAACAGATA----CAAGATGGAGAACATTTCCA---TGTTCT-GTTTGCTCCTTTCAGTGTTTGGGACAAGAG-ATAGACAGGTGGAGAGTACATAACCCCTCCCCCAACACCCACAACCCCCGCAGGTTTCCAACCTGCCTTGTAAATACTGTTGTCAGCACACAGGCTGTCAAAAGCAGAGGAGCCGAGGCTTGGAAGACTGTTGGCTTAGGAGTTGGGAGAACTCTA--TCC--TTTCTGAGGTGACCACAAGCAAGTT------------------TAAACCCGTGTG-AAGAATGTA i macFas5.chr13 C 0 I 311 s macNem1.NW_012011978v1 1377299 640 + 3644372 TTTCAGTGTTTAGTTGAA--CTCTGTGTGTTTGAATATGAGACACCAGTCAGCAAATGCCTTCTAACAATCGTCCAGTCACTGATACTGCCCAGGACCTGCTGTTTGCATTCTCAGCCTATTTTCATGTGTTTCTTGACTGTTTTCTTCCTCCAGGACTCCCCGTGTATCACAGCAGT-GCCAGAGGAATCCCGGCAGTCAGCCGGAAAGCT-AGTTTACTCCTCCGGGCCC----ATAGTTCATGGGAACCGATGTTC-AGCT-CCTCTGAT--------AGCCTCTCATAAATGTACAACCATGAAT--CCTGCTCTGCC---CTTGCTGGTGGAGGGA-CCATTTGATTGTTGTCCTTTCAGACAGATAAAAGTTAGGGCGGGGTTTTTCAAAACAGATA----CAAGATGGAGAACATTTCCA---TGTTCT-GTTTGCTCCTTTCAGTGTTTGGGACAAGAG-ATGGACAGGTGGAGAGTACATAACCCCTCCCCCAACACCCACAACCCCCGCAGGTTTCCAACCTGCCTTGTAAATACTGTTGTCAGCACACAGGCTGTCAAAAGCAGAGGAGCCGAGGCTTGGAAGACTGTTGGCTTAGGAGTTGGGAGAACTCTA--TCC--TTTCTGAGGTGACCACAAGCAAGTT------------------TAAACCCGTGTG-AAGAATGTA i macNem1.NW_012011978v1 C 0 I 311 s cerAty1.NW_012000820v1 1331146 639 - 10304083 TTTCAGTGTTTAGTTGAA--CTCCGTGTGTTTGAATATGAGACACCAGTCAGCAAATGCCTTCTAACAATCGTCCAGTCACTGACACTGCCCAGGACCCGCTGTTTGCATTCTCAGCCTATTTTCATGTGTTTCTTGACTGTTTTCTTCCTCCAGGACTCCCCGCGTATCACAGCAGT-GCCAGAGCAATCCTGGCAGTCAGCCGGAAAGCT-AGTTTACCCCTCCGGGCCC----ATAGTTCATGGGAACTGATGTTC-AGCT-CCTCTGAT--------AGCCTCTCATAAATGTACAACCATGAAT--CCTGCTCTGCC---CTTGCTGGTGGAGGGA-CCATTTGATTGTTGTCCTTTCAGACAGATAAAAGTTGGGGCAGGATTTTTCAAAACAGATA----TAAGATGTAAAACATTTCCA---TGTTCT-GTTTGCTCCTTTCAGTGTTTGGGACAAGAG-ATAGACAGGTGGAGAGTACATAACCCCT-CCCCAACACCCGCAACCCCCGCAGGTTTCCAGCCTGCCTTGTAAATACTGTTGTCAGCACACAGGCTGTCAAAAGCAGAGGAGCCGAGGCTTGGAAGACTGTTGGCTTAGGAGTTGGGGGAACTCTA--TCC--TTTCTGAGGTGACCACAAGCAAGTT------------------TAAACCCGTGTG-AAGAATGTA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1402363 640 - 107702431 TTTCAGTGTTTAGTTGAA--CTC--TGTGTTTGAATACGAGACACCAGTCAGCAAATGCCTTCTAACAATCGTCCAGTCACTGATACTGCCCAGGACCCGCTGTTTGCATTCTCCGCCTATTTTCATGTGTTTCTTGGCTGTTTTCTTCCTCCAGGACTCCCCGCGTATCACAGCAGT-GCCAGAGGAATCCTGGCAGTCAGCCGGAAAGCT-AGTTTACCCCTCTGGGCCC----ATAGTTCATGGGAACTGATGTTC-AGCT-CCTCTGAT--------AGCCTCTCATAAATGTACAACCATGAGT--CCTGCTCTGCC---CTTGCTGGTGGAGGGA-CCATTTGATTGTTTTCCTTTCAGACAGATGAAAGTTAGGGCAGGATTTTTCAAAACAGATA----TACGATGGAGAACATTTCCATGTTGTTCT-GTTTGCTCCTTTCAGTGTTTGGGACAAGAG-ATAGACAGGTGGAGGGTACATAACCCCT-CCCCAACACCCGCAACCCCCGCGCGTTTCCAACCTGCCTTGTGAATAGTGCTGTCAGCACACAGGCTGTCCAAAGCAGAGGAGCCAAGGCCTGGAAGACTGTTGGCTTAGGAGCTGGGAGAACTCTG--TCC--TTTCTGAGGTGACCACAAGCAAGTG------------------TAAACCCGTGTG-AAGAATGTA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 879726 634 - 2200435 TTTCAGTGTTTAGTTGAA--CTCCGTGTGTTTCAATATGAGACACCAGTCAGCAAATGCCTTCTAACAATCATCCAGTCACTGACACTGCCCAGGACCCGCTGTTTGCATTCTCAGCCTATTTTCATGTG-----TGACTGTTTTCTTCCTCCAGGACTCCCCGCGTATCACAGCAGT-GCCAGAGGAATCCTGGCAGTCAGCCGGAAAGCT-AGTTTACCCCTCCGGGCCC----ATAGTTCATGGGAACTGATGTTC-AGCT-CCTCTGAT--------AGCCTCTCATAAATGTACAACCATGAAT--CCTGCTCTGCC---CTTGCTGGTGGAGGGA-CCATTTGATTGTTGTCCTTTCAGACAGATAAAAGTTGGGGCAGGATTTTTCAAAACAGATA----TAAGATGTAAAACATTTCCA---TGTTCT-GTTTGCTCCTTTCAGTGTTTGGGACAAGAG-ATAGACAGGTGGAGAGTACATAACCCCT-CCCCAACACCCGCAACCCCCGCAGGTTTCCAGCCTGCCTTGTAAATACTGCTGTCAGCACACAGGCTGTCAAAAGCAGAGGAGCCGAGGCTTGGAAGACTGTTGGCTTAGGAGTTGGGGGAACTCTA--TCC--TTTCTGAGGTGACCACAAGCAAGTT------------------TAAACCCGTGTG-AAGAATGTA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1318220 643 - 13651311 TTTCAGTGTTTAGTTGAA--CTCTGTGTGTTTGAATATGAGACACCAGTCAGCAAATGCCTTCTAACAATCGTCCAGTCACTGATACTGCCCAGGACCTGCTGTTTGCATTCTCAGCCTATTTCCATGTGTTTCTTGACTGTTTTCTTCCTCCAGGACTCCCTGTGTATCACAGCAGT-GCCAGAGGAATCCCGGCAGTCAGCCGGACAGCT-AGTTTACCCCTCTGGGCCC----ATAGTTCATGGGAGCTGATGTTC-AGCT-CCTTTGAC--------AGCCTCTCATAAATGTACAGCCATGAAT--CCTGCTCTGCT---CTTGCTGGTGAAGGGA-CCATTTGATTGTTGTCCTTTCAGACAGGTAAAAGTTAGGGCAGGATTTTTCAAAACAGATA----GAAGATGGAGAACATTTCCATGTTGTTCTAGTTTGCTCCTTTCAGTGTTTGGGACAAGAG-ATAGACAGGTGCAGAGTACATAACCCCTCCCCCAACCCCCGCAACCCCCGCAGGTTTCCAACCTGCCTTGTGAATACTGTTGTCAGCACACAGGCTGTCAAAAGCAGAGGAGCTGAGGCTCGGAAGACTGTTGGGTTAGGAGCTGGGAGAACTCTG--TCC--TTTCTGAGGTGACCACAAGCAGGT-------------------TAAACCCGTGTG-AAGAATGTA i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 909700 541 + 5252280 GCCCAGGATTTAGTTG----CTCTCTGGGTTTGAACA-----------TCAGCTAAGGTGTTTTAATGATCA---AGTTTCCG-TGTTGGCCATGACCTAGCACTTCCATCGTCAGACTAGTTTAAAGTATTCTGTGACTGTTTTCTCCCTTCAGGGTGCC----------CAGCAGT-GCC-GAGAAGCC----CAGTCAGTGGGATA-------------CGACGTGTGG----ATAATTTACGAGAGCTGATTTTC-AAATGCCTCTGAT-TACTGACAGGCCCTACTGGTCACACAACCCCGA-T--CCTTCTCTGCC---CCT--TGGTGGGGGTCTCCATTTGATTGTTTTCTACTCAGACATGTGAAAAGTAGGGCAGAGTTTTTCAAAGCAGATAGATGTAAAATTGGGGAGATTTGTGTTTGGTTTAGTTTTGCTTTCTCCAGTGTTTGGGACA-----------TGGTGG-----------CCCTTGGGCTGCAGCCCA-----CCCTCAGGTTTCCGACCTGCCTC-----TGCAATGGTCCACACATGAGATGTCAAAAG---------TGAGGCATGGCCCAC-----GTGCAGGAGATGGTGGC--------TCC--TACTTGCCATG----CGGGCTGTGT------------------TAAGCCC--------------- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1611188 621 + 4416731 TTCTAATATT-AGTTGAATTCTCTGTGTGTTTGGACAATCAATATCATCCTACTAATGCCTTTTAA------TCAAATTATTGATATTTCCCTTGACCTAATGTTTGTATTCTCAAACTATTTTTATATGTTCGATGATGATTTTCTTCCATTGTGACTCTCAACATATAA-AGCAGTGGCTACAGAACCCCAAACAGTTAGTAAGAGTGTTGGGTTTACTCTTTTGTCTCTATGGATAATTCATAGGAACTGATTTTTAAACG-CCTCTGATTTACTCTTAGTCTCTAATGAATATACATCAGTAAATAACTTCACCTGCCAATCTT--TGGTGACATGA-CCTACT--TTGTTGTATAGT-AGACACATGGTATAAAGTATAGGTTCTTTCAAAATAGGCA----TAAGATTGGACAGACT-------TATTTT-----------TTCAGAGTTCGGGACAAAAGAATGAACGAGTGAATGGTGCACAGTCCGCCCTCCTA------------------GTGTCCAGCATGACTTTAGA------------GCATACAGAATGCCAAA----GAGGCATCT-GGCTTAAAAGACTATTGGCTTAGAAGTTTGGAGAACTCTG--TCCCACTTCTGAC-TGGACAAAAACAAGCTATATTACCATTGTTTATATGAATTTGTTTATAAGAATTTC i dasNov3.JH576208 M 216 C 0 e aotNan1.NW_018513311v1 60809 114 + 287728 I e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1179756 0 - 7082604 C e cebCap1.NW_016107827v1 1272213 12 + 1864846 I e calJac3.chr14 1327737 387 - 108792865 I a score=1580231.000000 s hg38.chr2_KI270774v1_alt 54938 261 + 223625 CCATGTTTAACTCTtttgctcatatatggaatagaaaaagtcacaatccctgttcttcaccccctcacaacctcattatgggcatcaggtgagaaatctgggaggaagttctcagcaaaccaggaaaagtgGGTTTTGAGATTTGAGCCGGTGCCTGCCATCTCTAAGGGTGTCCTTATCCATGCAACCAGGTGCCTCCTGAAGTTATGAATGGAATCTGTGCACACACGC----TAGAAAAGCAGCAGGAAGCATTCACAGGCA s panTro5.chr2A 1331947 261 + 111504155 CCATGTTTGACTCTTTTGCTCATATATGGAATAGAAAAAGTCACACTCCCTGTTCCCCACCCCCTCACAACCTCATTATGGGCATCAGGTGAGAAATCTGGGAGGAAGTTCTCAGCAAACCAGGAAAAGTGGGTTTTGAGATTTGAGCCGGTGCCTGCCATCTCTAAGGGTGTCCTTATCCATGCAACCAGGTGCCTCCTGAAGTTATGAATGGAATCTGTGCACACACGC----TAGAAAAGCAGCAGGAAGCATTCACAAGCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1292627 261 + 114371477 CCATGTTTGACTCTTTTGCTCATATATGGAATAGAAAAAGTCACACTCCCTGTTCCCCACCCCCTCACAACCTCATTATGGGCATCAGGTGAGAAATCTGGGAGGAAGTTCTCAGCAAACCAGGAAAAGTGGGTTTTGAGATTTGAGCCGGTGCCTGCCATCTCTAAGGGTGTCCTTATCCATGCAACCAGGTGCCTCCTGAAGTTATGAATGGAATCTGTGCACACACGC----TAGAAAAGCAGCAGGAAGCATTCACAAGCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1317537 260 + 1464242 ccatgtttgactcttttgctcatatatggaatag-aaaagtcacaatccctgttccccaccccctcacaacctcattatgggcatcaggtgagaaatctgggaggaagttctcagcaaaccaggaaaagtgGGTTTTGAGATTTGAGCCGGTGCCTGCCATCTCTAAGGGTGTCCTTATCCATGCAACCAGGTGCCTCCTGAAGTTATGAATGGAATCTGTGCACACACGC----TAGAAAAGCAGCAGGAAGCATTCACAGGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1048354 259 + 81552678 CCATGTTTGACTCTTTTGCTCATATATGGAATAGAAAAAGT--CAATCCCTGTTCCCCACCCCCTCACAACCTCATTATGGACGTCAGGTGAGAAATCTGGGAGGAAGTTCTCAGCAAACCAGGAAAAGTGGGTTTTCAGATTTGAGCCGGTGCCTGCCATCTCTAAGGGTGTCCTTATCCATGCAACCAGGTGCCTCCTGAAGTTATGAATGGAATCGGTGCACACACGC----TAGAAAAGCAGCAGGAAGCGTTCACAGGTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1377588 261 + 108979918 cCATGTTTGACTCTtttgctcatatatggaagagaaaaagtcgcaatccctgttccccaccccctcacaacctcattatgggcatcaggtgagaaatctgggagaaagttctcagcaaaGCAGGAAAAGCGGGTTTTCAGATTTGAGCCTGTGCCTGCCATCTCTAAGGCTGTCCTTATCCATGCATCCAGGTGCCTCCCGAAGTTATGAATGGAGTCCGTGCACACACGC----TAGAAAAGCAGCAGGAAGCATTCACAGGCA i rheMac8.chr13 I 314 C 0 s macFas5.chr13 1349770 261 - 111193037 cCATGTTTGACTCTtttgctcatatatggaagagaaaaagtcgcaatccctgttccccaccccctcacaacctcattatgggcatcaggtgagaaatctgggagaaagttctcagcaaaGCAGGAAAAGCGGGTTTTCAGATTTGAGCCTGTGCCTGCCATCTCTAAGGCTGTCCTTATCCATGCATCCAGGTGCCTCCCGAAGTTATGAATGGAGTCCGTGCACACACGC----TAGAAAAGCAGCAGGAAGCATTCACAGGCA i macFas5.chr13 I 311 C 0 s macNem1.NW_012011978v1 1378250 259 + 3644372 cCATGTTTGACTCTtttgctcatatatggaagagaaaaagtcgcaatccctgttccccaccccctcacaacctcattatgggcatcaggtgagaaatctgggagaaagttttcagcaaaGCAGGAAAAGCGGGTTTTCAGATTTGAGCCTGTGCCTGCCATCTCTAAGGCTGTCCTTATCCATGCATCCAGGTGCCTCCCGAAGTTATGAATGGAGTCCGTGCACACACGC----TAGAAAG--AGCAGGAAGCATTCACAGGCA i macNem1.NW_012011978v1 I 311 I 722 s cerAty1.NW_012000820v1 1331785 260 - 10304083 CCGTGTTTGACTCTtttgctcatatatggaagagaaaaagtcacaatccctgttccccaccccctcacaacctcattatgggcatcaggtgagaaatctgggaggaagttctcagcaaaGCAGGAAAAGCGGGTTTTCAGATTTGAGCCTGTGCCTGCCTACTCTAAGGGTGTCCTTATCCA-GCATCCAGGTGCCTCCCGAAGTTATGAATGGAGTCCGTGCACACACGC----TAGAAAAGCAGCAGGAAGCATTCACAGGCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1403003 249 - 107702431 CCATGTTTGACTCTTTGGCTCATATATGGAATAGAAAAAGTCACAATCCCTGTTCCCCACCCCCTCACAACCTCATTATGGGCATCAGGTGAGAAATCT----GGAAGTTCTCAGCAAAGCAGGAAAAGCGGGTTTTCAGATTTGAGCCGGTGCCTGCCATCTCTAAGGGTGTCCT--------CATCCAGGTGCCTCCTGAAGTTATGAATGGAGTCCGTGCACACACAC----TAGAAAAGCAGCAGGAAGCATTCACAGGCG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 880360 260 - 2200435 CCGTGTTTGACTCTtttgctcatatatggaagagaaaaagtcacaatccctgttccccaccccctcacaacctcattatgggcatcaggtgagaaatctgggaggaagttctcagcaaaGCAGGAAAAGCGGGTTTTCAGATTTGAGCCTGTGCCTGCCTACTCTAAGGGTGTCCTTATCCA-GCATCCAGGTGCCTCCTGAAGTTATGAACGGAGTCCGTGCACACACGC----TAGAAAAGCAGCAGGAAGCACTCACAGGCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1318863 261 - 13651311 CCATGTTTGACTCTTTTGCTCATATATGGAGTAGAAACAGTCACAATCCCTGTTCCCCACCCCCTCACAACCTCATTATGGGCATCAGGTGAGAAATCTGGGAGGCAGTTCTCAGCAAAGCAGGAAAAGCGGGTTTTCAGAGTTGAGCCGGTGCCTGCCATCTCTAAGGGTGTCCTTATCCATGCATCCAGGTGCCTCCTGAAGTTATGAATGGAGTCCGTGCACACACGC----TAGAAAAGCAGCAGGAAGCATTCACAGGCA i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 910241 242 + 5252280 CCATCTTC--TCCTGTTGCCC--GTCTGCCATCAGAACAGTCACAATACCT-------CCCTCCAAAGGGCCTCCTCGTGGGTACAATGTGAAGACCCT-GGAGGAAGTTCTCAGTAAACCAGGACAAGGGCCTCCTTGCACCTGACCATGCACCTGCCATCTCTAAGGATGTCCCTACTTGGGATTCTCTACCCCTTCCAAGAGTGTGATC--AGCACACGCTCACACGT----TGGAGA--TAGCAGTGGTCAT---CAAGCA i otoGar3.GL873658 C 0 I 3 s dasNov3.JH576208 1611809 241 + 4416731 -CTGTCTTGTTTCTTTTTCTCATTTATGGAATGG-CATAGTAATAATCCTTGAACCC-ACTCTCCCACAGCCTCAACAAAAACATCATATGGGAAATATGGGGGAAAGCCCTTATTGTATTTGGCCAAAT---------------------TATCCTCTATCTTAAAGGGTATCTGTACCTATGAAATTGTGTACCTACTGAATATTTGAGTGAAATACATGTACACACAcatttgaaaaaaagaccagtgatcaaagagagcca i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 60809 114 + 287728 I e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1179756 0 - 7082604 C e cebCap1.NW_016107827v1 1272213 12 + 1864846 I e calJac3.chr14 1327737 387 - 108792865 I a score=295034.000000 s hg38.chr2_KI270774v1_alt 55199 61 + 223625 GCACCATTTCCCTAAGGAAAAGCA-CTTTCTATCTGTGAAAAAGGCCCCGATAGACGCGGGC----- s panTro5.chr2A 1332208 61 + 111504155 GCACCATTTCCCTAAGGAAAAGCA-CTTCCTATCTGTGAAAAAGGCCCCGATAGACGCGGGC----- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1292888 61 + 114371477 GCACCATTTCCCTAAGGAAAAGCA-CTTCCTATCTGTGAAAAAGGCCCCAATAGACGCGGGC----- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1317797 60 + 1464242 GC-CCATTTCCCTAAGGAAAAGCA-CTTTCTATCTGTGAAAAAGGCCCTGATAGACGCGGGC----- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1048613 60 + 81552678 GCACCATTTCCCTAAGGAAAAGCA-CTTTCTACCTGTG-AAAAGGCCCCGATAGACGCGGGG----- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1377849 61 + 108979918 GCCCCGTTTCCCTAAGGAAAAGCA-CTTCCTGTCTATGAAAAAGGCCCCGATAGATGTGGGG----- i rheMac8.chr13 C 0 I 1 s macFas5.chr13 1350031 61 - 111193037 GCCCCGTTTCCCTAAGGAAAAGCA-CTTCCTGTCTATGAAAAAGGCCCCGATAGATGTGGGG----- i macFas5.chr13 C 0 I 1 s cerAty1.NW_012000820v1 1332045 61 - 10304083 GCCCCGTTTCCCTAAGGAAAAGCA-CTTCCTGTCTGTGAAAAAGGCCCCGATAGATGCGGGG----- i cerAty1.NW_012000820v1 C 0 I 1 s chlSab2.chr14 1403252 61 - 107702431 GCCCCGTTTCCCTAAGGAAAAGCA-CTTCCTGTCTGTGAAAAAGGCCCCGATAGCTGCGGGG----- i chlSab2.chr14 C 0 I 13 s manLeu1.NW_012103754v1 880620 61 - 2200435 GCCCCGTTTCCCTAAGGAAAAGCA-CTTCCTGTCTGTGAAAAAGGCCCCGATAGATGCGGGG----- i manLeu1.NW_012103754v1 C 0 I 1 s colAng1.NW_012118821v1 1319124 61 - 13651311 GCCCCGTTTCCCTAAGGAAAAGCA-CTTCCTATCTGTGAAAAAGGCCCCGAGAGAGGCAGGG----- i colAng1.NW_012118821v1 C 0 I 1 s otoGar3.GL873658 910486 56 + 5252280 AGACGACCTCGCCAAAGAAAA------TTCTACTTGCAAAGAAGTCCCTGGAAGATTTGGCT----- i otoGar3.GL873658 I 3 C 0 s dasNov3.JH576208 1612050 67 + 4416731 acatgatttcattaaggaaaagtatttttctatttgtgaaaaaatccctaatagataagaaaagtgc i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 60809 114 + 287728 I e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1179756 0 - 7082604 C e cebCap1.NW_016107827v1 1272213 12 + 1864846 I e calJac3.chr14 1327737 387 - 108792865 I e macNem1.NW_012011978v1 1378509 722 + 3644372 I a score=37732.000000 s hg38.chr2_KI270774v1_alt 55260 14 + 223625 -TTAGAAACATAAGT s panTro5.chr2A 1332269 14 + 111504155 -TTAGACACATATGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1292949 14 + 114371477 -TTAGACACATATGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1317857 14 + 1464242 -TTAGACACATATGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1048673 14 + 81552678 -TTAGACACATATGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1377911 14 + 108979918 -GTAGACATATATGT i rheMac8.chr13 I 1 C 0 s macFas5.chr13 1350093 14 - 111193037 -GTAGACATATATGT i macFas5.chr13 I 1 C 0 s cerAty1.NW_012000820v1 1332107 14 - 10304083 -GTAGACATATATGT i cerAty1.NW_012000820v1 I 1 C 0 s manLeu1.NW_012103754v1 880682 14 - 2200435 -GTAGACATATATGT i manLeu1.NW_012103754v1 I 1 C 0 s colAng1.NW_012118821v1 1319186 14 - 13651311 -GTAGACACGTATGT i colAng1.NW_012118821v1 I 1 C 0 s otoGar3.GL873658 910542 3 + 5252280 ------------TTT i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1612117 15 + 4416731 tatagacttggaaag i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 60809 114 + 287728 I e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1179756 0 - 7082604 C e cebCap1.NW_016107827v1 1272213 12 + 1864846 I e calJac3.chr14 1327737 387 - 108792865 I e chlSab2.chr14 1403313 13 - 107702431 I e macNem1.NW_012011978v1 1378509 722 + 3644372 I a score=1049152.000000 s hg38.chr2_KI270774v1_alt 55274 217 + 223625 TCCTCATTTCAGTGAAGCGCTTGCAAGCACTCCCTATCAGCAAGCTGGAGAAGTACACACAGAA-AA------------TGCAGG-TTACGGTGGAA-AATGAAGACATGCCTGGCACATCGTCAGGAGCATGGCTAAGTCAGAGACCCAGAGGCGGCATATGCTGAAGTACAAAATTAACACTTTGTAAAGCCCTTAACAGGTTAAAACCCTGGGATA-AACTAACACAATC s panTro5.chr2A 1332283 217 + 111504155 TCCTCATTTCAGTGAAGCGCTTGCAAGCACACCCTATCAGCAAGCTGGAGAAGTACACACAGAA-AA------------TGCAGG-TTACGGTGGAA-AATGAAGACATGCCTGGCACATCGTCAGGAGCATGGCTAAGTCAGAGACCCGGAGGTGGCATATGCTGAAATACAGAATTAACACTTTGTAAAGCCCTTAACAGGTTAAAACCCTGGGATA-AACTAACACAATT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1292963 217 + 114371477 TCCTCATTTCAGTGAAGCGCTTGCAAGCACACCCTATCAGCAAGCTGGAGAAGTACACACAGAA-AA------------TGCAGG-TTACGGTGGAA-AATGAAGACATGCCTGGCACATCGTCAGGAGCATGGCTAAGTCAGAGACCCGGAGGTGGCATATGCTGAAATACAGAATTAACACTTTGTAAAGCCCTTAACAGGTTAAAACCCTGGGATA-AACTAACACAATC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1317871 217 + 1464242 TCCTCATTTCAGTGAAGCGCTTGCAAGCACACCCTGTCAGCAAGCTGGAGAAGTACACACAGAA-AA------------TGCAGG-TTACGGTGGAA-AATGAAGACATGCCTGGCACGTCGTCAGGAGCATGGCTAAGTCAGAGACGGGGAGGTGGGATATGCTGAAATACACAATTAACACTTTGTAAAGCCCTTAACAGGTTAAAACCCTGGGATA-AACTAACACAATC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1048687 199 + 81552678 TCCTCATTTCAGTGAAGCGCTTGCAAGCACACCCTATCACCAAGCTGGAGAA--------------------------------G-TTATGGTGGAAGAATGAAGACATGCCTGGCACATCCTCAGGAGTATGGCTAAGTCAGAGACGGGGAGGTGGGATATGCCGAAATACAGAATTAACAGTTTGTAAAGCCCTTAACAGGTTAAAACCCTGGGACA-AACTAACACAATC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1377925 219 + 108979918 TCCTCATTTCAGTGAGGCGCTTGCAAGCACACCCTGTCACCAAGCTGGAGAAGTGCACATGGAA-AA------------CGCAGGTTTACGGTGgaagaatgaagacatgcctggcacatcgtgaggaccatggctaagtcagagacagggaggtgggatatgctgaaatacagaattaacagtttgtaaagcccttaacaggttaaaaccctgggata-aactaacacaatc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1350107 219 - 111193037 TCCTCATTTCAGTGAGGCGCTTGCAAGCACACCCTGTCACCAAGCTGGAGAAGTGCACATGGAA-AA------------CGCAGGTTTACGGCGGAAGAATGAAGACATGCCTGGCACATCGTGAGGACCATGGCTAAGTCAGAGACAGGGAGGTGGGATATGCTGAAATACAGAATTAACAGTTTGTAAAGCCCTTAACAGGTTAAAAACCTGGGATA-AACTAACACAATC i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1332121 219 - 10304083 TCCTCATTTCAGGGAGGCGCTTGCAAGCACACCCTGTCACCGAGCTGGAGAAGTGCACATGGAA-AA------------CGCAGGTTTACGGTGGAAGAGTgaagacatgcctggcacattgtgaggaccatggctaagtcagagacagggaggtgggatatgctgaaatacagaattaacagtttttaaagcccttaacaggttaaaaccctgggata-aactaacacaatc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1403326 219 - 107702431 TCCTCATTCCAGTGAGGCGCTTGCAAGCGCCCCCTATCACCAAGCTGGAGAAGTGCACATGGAA-AA------------TGGAGGTTTACGGTGGGAGAATGAAGACATGCCTGGCACATCGTGAGGACCATGGCTAAGTCAGAGACAGGGAGGTGGGATATGCTGAAATACAGAATTAACAGTTTGTCAAGCCCTTAATAGGTTAAAACCCTGGGATA-AACTAACACAGTC i chlSab2.chr14 I 13 C 0 s manLeu1.NW_012103754v1 880696 219 - 2200435 TCCTCATTTCAGGGAGGCGCTTGCAAGCACACCCTGTCACCAAGCTGGAGAAGTGCACATGGAA-AA------------CGCAGGTTTACGGTGgaagaatgaagacatgcctggcacatcgtgaggaccatggctaagtcagtgacagggaggtgggatatgctgaaatacagaattaacagtttgtaaagcccttaacaggttaaaaccctgggata-aactaacacaatC i manLeu1.NW_012103754v1 C 0 I 776 s colAng1.NW_012118821v1 1319200 219 - 13651311 TCCTCATTTCAGTGAGGCGCTTGCAAGCACACCCGACCACCAAGCTGGAGAAGTGCACATGGAA-AA------------TGCAGGTTTATGGTGGAAGAAGGAAGACATGCCTGGCACATCGTGAGGACCATGGCTAAGTCAGAGACAGGGAGGTGGGATATGCTGAAATACAGAATTAACAGTTTGTAAAGCCCTTAACAGGTGAAAACCCTGGGATA-AACTAACACAGTC i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 910545 183 + 5252280 TCCT----------------------ATGCATTCTGCATCCCAGGTGGAGACATTAATGTGGGATAA------------TACTGATTTATAGTTGGA-GAGCAGGGTGGGCAGGGTGCATCACCACAGGCACAGCTAAGTCAGAGGGAGGGAA--GGTGCATCGTGAAATGCACAGTGAAGACGTTGTAAAGGTC-------------ACCCTGAGATGCAACCAAGACAAGG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1612132 228 + 4416731 tatccatctcaatgaggcatttgacagcatgtcttatgacctagttaaagtaatgcatgctgga-taatgttatggttttgtagatttatagttggtgaataaAGATATATATGGCACACCATCAAAAGCATAATTAGATTGAAAACAAGGACATGG--TAGTTTGAAATacaaaattaaaaa--tgtaatgcttttaacaagttaaagcactgggataaaactagtacaata i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 60809 114 + 287728 I e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1179756 0 - 7082604 C e cebCap1.NW_016107827v1 1272213 12 + 1864846 I e calJac3.chr14 1327737 387 - 108792865 I e macNem1.NW_012011978v1 1378509 722 + 3644372 I a score=425688.000000 s hg38.chr2_KI270774v1_alt 55491 112 + 223625 GATGTTTTAGAGAAGAAAGTACTATCATTGAATTT-------TAAAAAAGA---------AAAGATTCAAGGGGAGCCCGGTC--T-CCCAAACAGTAGCTGTTGGGAGAAGCATGTGGAACATTTAGGTG s panTro5.chr2A 1332500 112 + 111504155 GATGTTTTAGAGAAGAAAGTACTATCATTGAATTT-------TAAAAAAGA---------AAAGATTCAAGGGGAGCCCAGTC--T-CCCAAACAGTAGCTGTTGGGAGAAGCATGTAGAACATTTAGGTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1293180 112 + 114371477 GATGTTTTAGAGAAGAAAGTACTATCATTGAATTT-------TAAAAAAGA---------AAAGATTCAAGGGGAGCCCAGTC--T-CCCAAACAGTAGCTGTTGGGAGAAGCATGTGGAACATTTAGGTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1318088 111 + 1464242 GATGTTTTAGAGAAGAAAGTACTATCATTGAATTT-------TAAAAAAG----------AAAGATTCAAGGGGAGCCCGGTC--T-CCCAAACAGTAGCTGTTGGGAGAAGCATGTGGAACATTTAGGTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1048886 112 + 81552678 GATGTTTTAGAGAAGAAAATACTATCATTGAATTT-------AAAAAAAGA---------AAAGATTCAAGGGGAGCCCAGTC--T-CCCAAACAGTAGCTGTTGGGAGAAGCATGTGGAGCATTTAGGTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1378144 115 + 108979918 --tg-tttagagaagaaagtactatagttgaatct-aaaaaaAAAAAAAAA---------AAAGATTCAAGGGGAGCCCAGTC--T-CCCAAACAGTAGCTCTTGGGAGAAGCATGTGGAGCATTTGGGTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1350326 112 - 111193037 --TG-TTTA---AAGAAAGTACTATAGTTGAATCT-aaaaaaaaaaaaaaa---------aaaGATTCAAGGGGAGCCCAGTC--T-CCCAAACAGTAGCTCTTGGGAGAAGCATGTGGAGCATTTGGGTG i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1332340 116 - 10304083 --tg-tttagagaagaaagtactatagttgaatttaaaaaaAAAAAAAAAA---------AAAGATTCAAGGGGAGCCCAGTC--T-CCCAAACAGTAGCTCTTGGGAGAAGCATGTGGAACATTTGGGTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1403545 108 - 107702431 --TG-TTTAGAGAAGAAAGTACTATAGTTGAATTT--------TTTTTAAA---------AATGATTCAAGGGGAGCCCAGTC--T-CCCAAACAGTAGCTCTTGGGAGAAGCATGTGGAGCATTTGAGTG i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1319419 109 - 13651311 --TG-TTTAGAGAAGAAAGTACTATAGTTGAATTA-------AAAAAAAAA---------AAAGATTCAAGGGGAGCCCAGTC--T-CCCAAACAGTAGCTCTTGGGAGAAGCATGTGGAGCATTTGGGTG i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 910728 119 + 5252280 TATGTTTTA--GAAGAAAGTACTACACTTACTTTT-------TTTAAAAAA-TTCACTATATATATTTGAGGAGACCCAAATTAAA-CTCAAA-AGTAGCTCTTGTGAGAAAACCGTGGAGGTTTTCGGTG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1612360 120 + 4416731 tatatgttg--gaagaaagaagtacaatttaattt-------aaaaaaataatccactatgtcaattccaggggacccaattc--taactcaacagtagcgcttgtaagaaaagtttggaggttttaggtg i dasNov3.JH576208 C 0 I 452 e aotNan1.NW_018513311v1 60809 114 + 287728 I e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1179756 0 - 7082604 C e cebCap1.NW_016107827v1 1272213 12 + 1864846 I e calJac3.chr14 1327737 387 - 108792865 I e manLeu1.NW_012103754v1 880915 776 - 2200435 I e macNem1.NW_012011978v1 1378509 722 + 3644372 I a score=301373.000000 s hg38.chr2_KI270774v1_alt 55603 71 + 223625 AAAGTGTTT---ttg----atccattcaacaagtatttgtagagcattaacccggggaccaggcactgtgacaggtgc s panTro5.chr2A 1332612 71 + 111504155 AAAGTGTTT---ttg----atccattcaacaagtatttgtagagcattaacccggggaccaggcactgtgacaggtgc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1293292 71 + 114371477 AAAGTGTTT---ttg----atccattcaacaagtatttgtagagcattaacccggggaccaggcactgtgacaggtgc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1318199 71 + 1464242 AAAGTGTTT---ttg----atccactcaacaagtatttgtagagcattaacccggggaccaggcactgtgacaggtgc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1048998 71 + 81552678 AAAGTGTTT---ttg----atcccttcaacaaatatttgcagagcattaaccccggggccaggcactgtgacaagtgc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1378259 71 + 108979918 AAAATGTTT---ttg----atccattcaacaaatatttgtagagcattaaccccagggccaggctctgtgacaggtgc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1350438 71 - 111193037 AAAATGTTT---ttg----atccattcaacaaatatttgtagagcattaaccccagggccaggctctgtgacaggtgc i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1332456 71 - 10304083 AAAGTGTTT---ttg----atccattcaacaaacatttgtagagcattaaccccagggccaggctctgtgacaggtgc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1403653 69 - 107702431 --AGTGTTT---ttg----atccattcaacaaatatttgtagagcattaaccccagggccaggctctgcgacaggtgc i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1319528 66 - 13651311 AAAGGGTTT---ttg----atccattcaacaaatatttgtagag-----gcctcagggccaggctctgtgacaggtgc i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 910847 73 + 5252280 GAAGCACATTGGTTG----ATTCATTCAGCAA-TGTCTGTGGAAAGTTAACTGGAACACAGGGCACGATGGCAGCTGC i otoGar3.GL873658 C 0 I 20 s dasNov3.JH576208 1612932 74 + 4416731 aaagtgtat---ttgagtcattcattcaacaaatagctgtggaatgttaact-aagtgtcaggcactgttgtaagtcc i dasNov3.JH576208 I 452 C 0 e aotNan1.NW_018513311v1 60809 114 + 287728 I e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1179756 0 - 7082604 C e cebCap1.NW_016107827v1 1272213 12 + 1864846 I e calJac3.chr14 1327737 387 - 108792865 I e manLeu1.NW_012103754v1 880915 776 - 2200435 I e macNem1.NW_012011978v1 1378509 722 + 3644372 I a score=32010.000000 s hg38.chr2_KI270774v1_alt 55674 6 + 223625 tgcagc s panTro5.chr2A 1332683 6 + 111504155 tgcagc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1293363 6 + 114371477 tgcagc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1318270 6 + 1464242 tgcagc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1049069 6 + 81552678 tgcagc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1378330 6 + 108979918 tgcagc i rheMac8.chr13 C 0 I 366 s macFas5.chr13 1350509 6 - 111193037 tgcagc i macFas5.chr13 C 0 I 8 s cerAty1.NW_012000820v1 1332527 6 - 10304083 tgcagc i cerAty1.NW_012000820v1 C 0 I 229 s chlSab2.chr14 1403722 6 - 107702431 tgCAGC i chlSab2.chr14 C 0 I 318 s colAng1.NW_012118821v1 1319594 6 - 13651311 tgcagc i colAng1.NW_012118821v1 C 0 I 8 s dasNov3.JH576208 1613006 6 + 4416731 tgcagc i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 60809 114 + 287728 I e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1179756 0 - 7082604 C e cebCap1.NW_016107827v1 1272213 12 + 1864846 I e otoGar3.GL873658 910920 20 + 5252280 I e calJac3.chr14 1327737 387 - 108792865 I e manLeu1.NW_012103754v1 880915 776 - 2200435 I e macNem1.NW_012011978v1 1378509 722 + 3644372 I a score=5038.000000 s hg38.chr2_KI270774v1_alt 55680 4 + 223625 cacg s panTro5.chr2A 1332689 4 + 111504155 catg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1293369 4 + 114371477 catg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1318276 4 + 1464242 catg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1049075 4 + 81552678 cata i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1350523 4 - 111193037 caag i macFas5.chr13 I 8 I 253 s colAng1.NW_012118821v1 1319608 4 - 13651311 caag i colAng1.NW_012118821v1 I 8 I 101 s dasNov3.JH576208 1613012 4 + 4416731 tata i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 60809 114 + 287728 I e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1179756 0 - 7082604 C e cebCap1.NW_016107827v1 1272213 12 + 1864846 I e otoGar3.GL873658 910920 20 + 5252280 I e calJac3.chr14 1327737 387 - 108792865 I e manLeu1.NW_012103754v1 880915 776 - 2200435 I e chlSab2.chr14 1403728 318 - 107702431 I e cerAty1.NW_012000820v1 1332533 229 - 10304083 I e macNem1.NW_012011978v1 1378509 722 + 3644372 I e rheMac8.chr13 1378336 366 + 108979918 I a score=3600.000000 s hg38.chr2_KI270774v1_alt 55684 1 + 223625 g s panTro5.chr2A 1332693 1 + 111504155 g i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1293373 1 + 114371477 g i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1318280 1 + 1464242 g i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1049079 1 + 81552678 g i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1350780 1 - 111193037 G i macFas5.chr13 I 253 C 0 s chlSab2.chr14 1404046 1 - 107702431 G i chlSab2.chr14 I 318 C 0 s colAng1.NW_012118821v1 1319713 1 - 13651311 G i colAng1.NW_012118821v1 I 101 C 0 s dasNov3.JH576208 1613016 1 + 4416731 g i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 60809 114 + 287728 I e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1179756 0 - 7082604 C e cebCap1.NW_016107827v1 1272213 12 + 1864846 I e otoGar3.GL873658 910920 20 + 5252280 I e calJac3.chr14 1327737 387 - 108792865 I e manLeu1.NW_012103754v1 880915 776 - 2200435 I e cerAty1.NW_012000820v1 1332533 229 - 10304083 I e macNem1.NW_012011978v1 1378509 722 + 3644372 I e rheMac8.chr13 1378336 366 + 108979918 I a score=7800.000000 s hg38.chr2_KI270774v1_alt 55685 1 + 223625 c s panTro5.chr2A 1332694 1 + 111504155 c i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1293374 1 + 114371477 c i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1318281 1 + 1464242 c i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1049080 1 + 81552678 c i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1378702 1 + 108979918 C i rheMac8.chr13 I 366 C 0 s macFas5.chr13 1350781 1 - 111193037 C i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1332762 1 - 10304083 C i cerAty1.NW_012000820v1 I 229 C 0 s chlSab2.chr14 1404047 1 - 107702431 C i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1319714 1 - 13651311 C i colAng1.NW_012118821v1 C 0 C 0 s cebCap1.NW_016107827v1 1272225 1 + 1864846 C i cebCap1.NW_016107827v1 I 12 C 0 s aotNan1.NW_018513311v1 60923 1 + 287728 C i aotNan1.NW_018513311v1 I 114 C 0 s dasNov3.JH576208 1613017 1 + 4416731 c i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1179756 0 - 7082604 C e otoGar3.GL873658 910920 20 + 5252280 I e calJac3.chr14 1327737 387 - 108792865 I e manLeu1.NW_012103754v1 880915 776 - 2200435 I e macNem1.NW_012011978v1 1378509 722 + 3644372 I a score=14131.000000 s hg38.chr2_KI270774v1_alt 55686 3 + 223625 -CTT s panTro5.chr2A 1332695 3 + 111504155 -CTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1293375 3 + 114371477 -CTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1318282 3 + 1464242 -CTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1049081 3 + 81552678 -CTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1378703 3 + 108979918 -CTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1350782 3 - 111193037 -CTT i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1332763 3 - 10304083 -CTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1404048 3 - 107702431 -CTT i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1319715 3 - 13651311 -CTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1328124 3 - 108792865 -cct i calJac3.chr14 I 387 C 0 s cebCap1.NW_016107827v1 1272226 3 + 1864846 -CTT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 60924 3 + 287728 -CTT i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1613018 3 + 4416731 aat- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1179756 0 - 7082604 C e otoGar3.GL873658 910920 20 + 5252280 I e manLeu1.NW_012103754v1 880915 776 - 2200435 I e macNem1.NW_012011978v1 1378509 722 + 3644372 I a score=179726.000000 s hg38.chr2_KI270774v1_alt 55689 36 + 223625 GGGTGGATGGGCAGCTTGGATGG---------------------------------------------------ATG-------------GGCAGCTTGG s panTro5.chr2A 1332698 36 + 111504155 GGGTGGATGGGCAGCTTGGATGG---------------------------------------------------ATG-------------GGCAGCTTGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1293378 87 + 114371477 GGGTGGATGGGCAGCTTGGATGGATGGGCACTTTGGATGAATGGGCAGCTTGGGTGGATGGGCAGCTTGGATGAATG-------------GGCAGCTTGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1318285 36 + 1464242 GGGTGGATGGGCAGCTTGGGTGG---------------------------------------------------ATG-------------GGCAGCTTGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1049084 36 + 81552678 GGATGGATGGGCAGCTTGGGTGG---------------------------------------------------ATG-------------GGCAGCTTGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1378706 32 + 108979918 AGGTGGATGGGCACCTTGGATGG---------------------------------------------------GTG-----------------CCTTGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1350785 36 - 111193037 GGGTGGATGGGCAGCTTGGATGG---------------------------------------------------ATG-------------GGCACCTTGG i macFas5.chr13 C 0 I 183 s cerAty1.NW_012000820v1 1332766 36 - 10304083 GGGTGGATGGGCAGCTTGGATGG---------------------------------------------------ATG-------------GGCAGCTTGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1404051 49 - 107702431 GGGTGGATGGGTAGCTTGGATGG---------------------------------------------------GTGCCTTGGGTGGATGGGTGCCTTGG i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1319718 36 - 13651311 GGGTGGATGGGCACCTCGAGTGG---------------------------------------------------ATG-------------GGCACCTCGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1328127 36 - 108792865 gggtggatggggagcttgggtgg---------------------------------------------------atg-------------ggcagtttgg i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1179756 36 - 7082604 GGGTGGACGGGCACCTTGAGGGG---------------------------------------------------ATG-------------GGCAGCTTGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1272229 36 + 1864846 GGATGGATGGGCACCGTGGGTGG---------------------------------------------------ATG-------------GGCAGCTTGG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 60927 36 + 287728 GGGTGGATGGGCAGCGTGGATAT---------------------------------------------------GTG-------------GGCACCTTGG i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1613021 12 + 4416731 gaataaatatac---------------------------------------------------------------------------------------- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89956681 3538 - 120129022 I e otoGar3.GL873658 910920 20 + 5252280 I e manLeu1.NW_012103754v1 880915 776 - 2200435 I e macNem1.NW_012011978v1 1378509 722 + 3644372 I a score=5947.000000 s hg38.chr2_KI270774v1_alt 55725 1 + 223625 G s panTro5.chr2A 1332734 1 + 111504155 G i panTro5.chr2A C 0 I 272 s panPan2.chr2A 1293465 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1318321 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 I 17 s nomLeu3.chr19 1049120 1 + 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1378738 1 + 108979918 G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1351004 1 - 111193037 G i macFas5.chr13 I 183 C 0 s cerAty1.NW_012000820v1 1332802 1 - 10304083 G i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1404100 1 - 107702431 G i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1319754 1 - 13651311 G i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1328163 1 - 108792865 a i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1179792 1 - 7082604 G i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1272265 1 + 1864846 A i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 60963 1 + 287728 G i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89956681 3538 - 120129022 I e otoGar3.GL873658 910920 20 + 5252280 I e dasNov3.JH576208 1613033 0 + 4416731 C e manLeu1.NW_012103754v1 880915 776 - 2200435 I e macNem1.NW_012011978v1 1378509 722 + 3644372 I a score=15678.000000 s hg38.chr2_KI270774v1_alt 55726 2 + 223625 TG s panTro5.chr2A 1333007 2 + 111504155 TG i panTro5.chr2A I 272 C 0 s panPan2.chr2A 1293466 2 + 114371477 TG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1318339 2 + 1464242 TG i gorGor5.CYUI01015607v1 I 17 C 0 s nomLeu3.chr19 1049121 2 + 81552678 TG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1378739 2 + 108979918 TG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1351005 2 - 111193037 TG i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1332803 2 - 10304083 TG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1404101 2 - 107702431 TG i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1319755 2 - 13651311 TG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1328164 2 - 108792865 ta i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1179793 2 - 7082604 TG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1272266 2 + 1864846 TG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 60964 2 + 287728 TG i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89956681 3538 - 120129022 I e otoGar3.GL873658 910920 20 + 5252280 I e dasNov3.JH576208 1613033 0 + 4416731 C e manLeu1.NW_012103754v1 880915 776 - 2200435 I e macNem1.NW_012011978v1 1378509 722 + 3644372 I a score=343252.000000 s hg38.chr2_KI270774v1_alt 55728 47 + 223625 GATGGGCAGCTTGGGTGGATGGGCAGCTTGGGTGGATGGGCACCTTG s panTro5.chr2A 1333009 47 + 111504155 GATGGGCAGCTTGGGTGGATGGGCAGCTTGGGTGGATGGGCACCTTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1293468 47 + 114371477 GATGGGCAGCTTGGGTGGATGGGCAGCTTGGGTGGATGGGCACCTTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1318341 47 + 1464242 GATGGGCACCTTGGGTGGATGGGCACCTTGGGTGGATGGGCAGCTTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1049123 47 + 81552678 GATGGGCAGGTTGGATGGATGGGCAGCTTGGGTGGATGGGCAGCTTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1378741 47 + 108979918 GATAGGCAGCTTGGATGGATGGGCAGCTTGGATGGATGGGCGCCTTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1351007 47 - 111193037 GATGGGCAGCTTGGATGGATGGGCAGCTTGGATGGATGGACGCCTTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1379231 47 + 3644372 GATGGGCAGCTTGGATGGATGGGCACCTTAGGTGGATGGGCACCTTG i macNem1.NW_012011978v1 I 722 I 67 s cerAty1.NW_012000820v1 1332805 43 - 10304083 GATGGGCACCTTGGGTGGATGGGCAGCT----TGGATGGGTGCCTTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1404103 47 - 107702431 GATGGGCACCTTGGGTGGATGGGCACCTTGGATGGATGGGCACCTTG i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1319757 47 - 13651311 GATGGGTGCCTTGGGTGGATGGGCAGCTTGGATGGATGGGCACCTCG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1328166 47 - 108792865 tgtgggcagcttgggtagatgggcagcttggatatgtgggcaccttg i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1179795 46 - 7082604 GACGGGCAGTTTGGGTGGATGGGGAG-TTGGATACATGGGCATCTTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1272268 47 + 1864846 GATGGGCAGCTTGGATATGTGGGCAGCTTGGGTGGATGGGCAGCTTG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 60966 47 + 287728 GATGGGGAGCTTGGGTGGATGGGCAGCTTGGATATGTGGGCAGCTTG i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1613033 11 + 4416731 ------------------------------------taaaaaccctg i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89956681 3538 - 120129022 I e otoGar3.GL873658 910920 20 + 5252280 I e manLeu1.NW_012103754v1 880915 776 - 2200435 I a score=4935.000000 s hg38.chr2_KI270774v1_alt 55775 2 + 223625 --GA s panTro5.chr2A 1333056 2 + 111504155 --GA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1293515 2 + 114371477 --GA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1318388 2 + 1464242 --GA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1049170 2 + 81552678 --GA i nomLeu3.chr19 C 0 I 957 s rheMac8.chr13 1378788 2 + 108979918 --GG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1351054 2 - 111193037 --GG i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1332848 2 - 10304083 --GG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1404150 2 - 107702431 --GG i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1319804 2 - 13651311 --GG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1328213 2 - 108792865 --gg i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1179841 2 - 7082604 --GG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1272315 2 + 1864846 --GG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 61013 2 + 287728 --GG i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1613044 2 + 4416731 cc-- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89956681 3538 - 120129022 I e otoGar3.GL873658 910920 20 + 5252280 I e manLeu1.NW_012103754v1 880915 776 - 2200435 I e macNem1.NW_012011978v1 1379278 67 + 3644372 I a score=75125.000000 s hg38.chr2_KI270774v1_alt 55777 10 + 223625 ----TGGATGGGCA s panTro5.chr2A 1333058 10 + 111504155 ----TGGATGGGCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1293517 10 + 114371477 ----TGGATGGGCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1318390 10 + 1464242 ----TGGATGGGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1050129 10 + 81552678 ----TGGATGGGCA i nomLeu3.chr19 I 957 C 0 s rheMac8.chr13 1378790 10 + 108979918 ----TGGATGGGCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1351056 10 - 111193037 ----TGGATGGGCA i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1332850 10 - 10304083 ----TGGATGGGCA i cerAty1.NW_012000820v1 C 0 I 147 s chlSab2.chr14 1404152 10 - 107702431 ----TGGATGGGCA i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1319806 10 - 13651311 ----TGGATGGGCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1328215 10 - 108792865 ----tgggtgggCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1179843 10 - 7082604 ----TGGACGGGCA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1272317 10 + 1864846 ----TGGATAGGCA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 61015 10 + 287728 ----TGGATGGGCA i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1613046 8 + 4416731 ctagtgca------ i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89956681 3538 - 120129022 I e otoGar3.GL873658 910920 20 + 5252280 I e manLeu1.NW_012103754v1 880915 776 - 2200435 I e macNem1.NW_012011978v1 1379278 67 + 3644372 I a score=66167.000000 s hg38.chr2_KI270774v1_alt 55787 30 + 223625 GCTCACAGGCTGGGATAAGCC-ATGGCACAT s panTro5.chr2A 1333068 30 + 111504155 GCTCACAGGCTGGGataagcc-atggcacat i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1293527 30 + 114371477 GCTCACAGGCTGGGATAAGCC-ATGACACAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1318400 30 + 1464242 GCTCACAGGCTGGGATAAGCC-ATGGCACAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1050139 30 + 81552678 GCTCACAGGCTGGGATAAGCC-ATGGCACAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1378800 6 + 108979918 GCTCAC------------------------- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1351066 6 - 111193037 GCTCAC------------------------- i macFas5.chr13 C 0 C 0 s chlSab2.chr14 1404162 6 - 107702431 GCTCAC------------------------- i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1319816 6 - 13651311 GCTCAC------------------------- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1328225 30 - 108792865 GCTcacaggctgggttaagcc-atggcacag i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1179853 30 - 7082604 GCTCACAGGCTGGGATAAGCC-ATGGCACAA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1272327 30 + 1864846 GCTCACAGGCTGGGataagcc-atgtcacag i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 61025 30 + 287728 GCTCACAGGCTGGGATAAGCC-ATGGCACAG i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1613054 31 + 4416731 gctaacatgctGAGatcaaccaaccatgtat i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89956681 3538 - 120129022 I e otoGar3.GL873658 910920 20 + 5252280 I e manLeu1.NW_012103754v1 880915 776 - 2200435 I e cerAty1.NW_012000820v1 1332860 147 - 10304083 I e macNem1.NW_012011978v1 1379278 67 + 3644372 I a score=294052.000000 s hg38.chr2_KI270774v1_alt 55817 34 + 223625 AGCTGCTGAAAACGCCGATGTCATTCTGGTGCTC-- s panTro5.chr2A 1333098 34 + 111504155 agctgctgaaaacgccgatgtcattctggtgctc-- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1293557 34 + 114371477 AGCTGCTGAAAACGCCGATGTCATTCTGGTGCTC-- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1318430 34 + 1464242 AGCTGCTGAAAACGCCGATGTCATTCTGGTGCTC-- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1050169 34 + 81552678 AGCTGCTGAAAACGCCAATGTCATCCTAGTGCTC-- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1378806 34 + 108979918 AGCTGCTGAAAATGCTGATGTCATCCTCATGCCC-- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1351072 34 - 111193037 AGCTGCTGAAAACACTGATGTCATCCTCATGCCC-- i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1333007 34 - 10304083 AGCTGCTGAAAACGCCGATGTCATCCTCATGCCC-- i cerAty1.NW_012000820v1 I 147 C 0 s chlSab2.chr14 1404168 34 - 107702431 AGCTGCTGAAAACGCTGATGTCATCCTCATGCCC-- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 881691 34 - 2200435 AGCTGCTGAAAACGCCGATGTCATCCTCATGCCC-- i manLeu1.NW_012103754v1 I 776 C 0 s colAng1.NW_012118821v1 1319822 34 - 13651311 AGCTGCTGAAAACGCCGATGTCATCCTCGTGCCC-- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1328255 34 - 108792865 agctactgaaaatgccaatgtcatcctggtgctc-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1179883 34 - 7082604 Agctactgaaaactccagtgtcatcctggtgctc-- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1272357 34 + 1864846 agctactgaaaacgccaatgtcatccttgtgctc-- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 61055 34 + 287728 Agctactgaaaacgccaatgtcatcctggcgctt-- i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1613085 36 + 4416731 ggctgctggaaaagctaatgtaatcttggggtgcct i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89956681 3538 - 120129022 I e otoGar3.GL873658 910920 20 + 5252280 I e macNem1.NW_012011978v1 1379278 67 + 3644372 I a score=3224638.000000 s hg38.chr2_KI270774v1_alt 55851 365 + 223625 ACCGTGAAGGAAGATGGGCAGA-CAATGGCTTGCCCctcgccatgcacccagaaccggtcagttcacacaggaaacgtggacttttgttctgggagccatgtttcaagaaggacactgacacactggTTCCCAACAGGTGGTCAGTTTTGTA----TCAGGTGCTTCCTTTAAAACACAACTCCACAGCACATGTCAGGAACTAGGG-------TTTTCATAGAGCAGGTAGGAAGCTATCCTGCTGTACACCCCTCTGGACAATCTGTACAAAGTGCACAGTAATTTTGCCACCTTAGCAGAATTTCCATAAACTGGATTATATTATAATGGGTTTTT----TGTGTTTTTAATCTTAAAACTCAGAGTCAATACT----C-----------TTT- s panTro5.chr2A 1333132 365 + 111504155 accgtgaaggaagatgggcaga-caatggcttgcccctcgccatgcacccagaaccggtcagttcacacaggaaacgtggacttttgttctgggagccatgtttcaagaaggacactgacacactggTTCCCAACAGGCGGTCAGTTTTGTA----TCAGGTGCTTCCTTTAAAACACAACTCCACAGCACATGTCAGGAACTAGGG-------TTTTCATAGAGCAGGTAGGAAGCTATCCTGCTGTATACCCCTCTGGACAATCTGTACAAAGTGCACAGTAATTTTACCACCTTAGCAGAATTTCCATAAACTGGATTATATTATAATGGGTTTTT----TGTGTTTTTAATCTTAAAACTCAGAGTCAATACT----C-----------TTT- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1293591 365 + 114371477 ACCGTGAAGGAAGATGGGCAGA-CAATGGCTTGCCCctcgccatgcacccagaaccggtcagttcacacaggaaacgtagacttttgttctgggagccatgtttcaagaaggacactgacacactggTTCCCAACAGGCGGTCAGTTTTGTA----TCAGGTGCTTCCTTTAAAACACAACTCCACAGCACATGTCAGGAACTAGGG-------TTTTCATAGAGCAGGTAGGAAGCTATCCTGCTGTATACCCCTCTGGACAATCTGTACAAAGTGCACAGTAATTTTACCACCTTAGCAGAATTTCCATAAACTGGATTATATTATAATGGGTTTTT----TGTGTTTTTAATCTTAAAACTCAGAGTCAATACT----C-----------TTT- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1318464 365 + 1464242 ACCGTGAAGGAAGATGGGCAGA-CAATGGCTTGCCCctcgccatgcacccagaaccgatcagttcacacaggaaacgtggacttttgttctgggagccatgtttcaagaaggacactgacacactggTTCCCAACAGGCGGTCAGTTTTGTA----TCAGGTGCTTCCTTTAAAACACAACTCCACAGCACATGTCAGGAACTAGGG-------TTTTCATAGAGCAGGTAGGAAGCTATCCTGCTGTATACCCCTCTGGACAATCTGTACAAAGTGCACAGTAATTTTACCACCTTAGCAGAATTTCCATAAGCTGGATTATATTATAATGGGTTTTT----TGTGTTTTTAATCTTAAAACTCAGAGTCAATACT----C-----------TTT- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1050203 363 + 81552678 ACCGTGAAGGAAGATGGGCAGA-CAATGCTGTGCCCCTCGCGACGCACCTGGAAccgatcagttcacacaggaaacgtggacttttgttctgggagccatgtttc---aaggacactgacacactggTTCCCAACAGGCGGTCAGTTTTGTA----TCAGGTGCTTCCTTTAAA--ACAACTCCACAGCACATGTCAGGAACTAGGG-------TTTTCATAGAGCAGGTAGAAAGCTGTCCTGCAGTATATCCCTCTGGACAATCTGTACAAAGCGCACAGTAATTTTACCACCTTAGCAGAATTTCCATAAACTGGATTATATTATGATGGGTTTTT------TGTTTTTAATCTTAAAACTCAGAGTCAATAGT----C------TTAATTTT- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1378840 357 + 108979918 ACCATGAAGGAAGATGGGCAGA-CAATGGCATGACCCCCGACACACACCTGGAAccgatcagttcacacaggaac--tggccttttgttctgggagccatgttt---gaaggacactgacacactggTTCTCAACAGGCAGTCACTTTTGTT----TCAGGTGCTTCCTTTAAA--ACACCTCCGCAGCACATGTCAGGAATTAGGG-------TTCTCATAGAGCAGATCGGAGGCTGTCCT-CTGTATAGCCCTCTGGACAATCTGTACAAAGTGCACAGTAATGTTACCACCTTAGCAGAATTTCCATAAACTGGATTATATTTTAATGGATTTTT----TGTGTTTTTAATCTTAAAACTCAGAGTCAATACT----C-----------TTT- i rheMac8.chr13 C 0 I 1 s macFas5.chr13 1351106 355 - 111193037 ACCATGAAGGAAGATGGGCAGA-CAACGGCATGACCCCCGACACACACCTGGAAccgatcagttcacacaggaac--tggccttttgttctgggagccatgttt---gaaggacactgacacactggTTCTCAACAGGCAGTCACTTTTGTT----TCAGGTGCTTCCTTTAAA--ACACCTCCGCAGCACATGTCAGGAATTAGGG-------TTCTCATAGAGCAGATCGGAGGC--TCCT-CTGTGTAGCCCTCTGGACAATCTGTACAAAGTGCACAGTAATGTTACCACCTTAGCAGAATTTCCATAAACTGGATTATATTATAATGGATTTTT----TGTGTTTTTAATCTTAAAACTCAGAGTCAATACT----C-----------TTT- i macFas5.chr13 C 0 I 1 s macNem1.NW_012011978v1 1379345 355 + 3644372 accatgaaggaagatggccaga-caacggcatgactcccgacacacacctggaaccgatcagttcacacaggaac--tggccttttgttctgggagccatgttt---gaaggacactgacacactggTTCTCAACAGGCAGTCACTTTTGTT----TCAGGTGCTTCCTTTAGA--ACACCTCCGCAGCACATGTCAGGAATTAGGG-------TTCTCATAGAGCAGATCGGAGGC--TCCT-CTGTGTAGCGCTCTGGACAATCTGTACGAAGTGCACGGTAATGTTACCACCTTAGCAGAATTTCCATAAACTGGATTATATTATAATGGATTTTT----TGTGTTTTTAATCTTAAAACTCAGAGTCAATACT----C-----------TTT- i macNem1.NW_012011978v1 I 67 I 1 s cerAty1.NW_012000820v1 1333041 363 - 10304083 ACCATGAAGGAAGATGGGCAGA-CAACAGCATGACCCCCGACACACACCTGGAAccgatcagttcacacaggaac--tggccttttgttctgggagccatgtttgaagaaggacactgacacactggTTCTAAACAGGCAGTCACTTTTGTT----TCAGGTGCTTCCTTTAAAACACACCTCCGCAGCACATGTCAGGAATTAGGG-------TTCTCATAGAGCAGGGCGGAGGCTGTCCTGCTGTGTAGCCCTCTGGACAATCTGTACAAAGTGCACAGTAATGTTACCACCTTAGCAGAATTTCCATAAACTGGATTATATTTTAATGGATTTTT----TGTGTTTTTAATCTTAAAACTCAGAGTCAATACT----C-----------TTT- i cerAty1.NW_012000820v1 C 0 I 1 s chlSab2.chr14 1404202 363 - 107702431 ACCGTGAAGGAAGATGGGCAGA-CAATGGCATGACCACTGACACACACCTGGAAccgatcagttcacacaggaac--tggccttttgttctgggagccatgtttcaagaaggacactgacacactggTTCTCAACAGGCAGTCACTTTTGTT----TCAGGTGCTTCCTTTAAAACACACCTCCGCAGCACATGTCAGGAATTAGGG-------TTCTCATAGAGCAGGTCGGAGGCTGTCCTGCTGTATAGCGCTCTGGACAATCTGTGCAAAGTGCACAGTAATTTTACCACCGTAGCAGAATTTCCATAAACTGGATTATATTTTAATGGATTTTT----TGTGTTTTTAATCTTAAAACTCAGAGTGAATACT----C-----------TTT- i chlSab2.chr14 C 0 I 225 s manLeu1.NW_012103754v1 881725 362 - 2200435 ACCATGAAGGAAGATGGGCAGA-CAACGGCATGACCCCCGACACACACCTGGAAccgatcagtgcacacgggaac--tggccttttgttctgggagccatgtttgaagaaggacactgacacactggTTCTAAACAGGCAGTCACTTTTGTT----TCAGGTGCTTCCTTTAAAACACACCTCCGCAGCACATGTCAGGAATTAGGG-------TTCTCATAGAGCAGGGCGGAGGCTGTCCTGCTGTGTAGCCCTCTGGACAATCTGTACAAAGTGCACAGTAATGTTACCACCTTAGCAGAATTTCCACAAACTGGATTATA-TTTAATGGATTTTT----TGTGTTTTTAATCTTAAAACTCAGAGTCAATACT----C-----------TTT- i manLeu1.NW_012103754v1 C 0 I 1 s colAng1.NW_012118821v1 1319856 361 - 13651311 ACCGTGAAGGAAGATGGGCAGA-CAATGGCATGACCCCTGACACACACCTGGAAccgatcagttcacacaggaac--tggccttttgttctgggagccatgtttcaagaagg--actgacacactggTTCTCAACAGGCAGTCACTTTTGTT----TCAGGTGCTTCCTTTAAAACACACCTCCGCAGCACAGGTCAGGAATTAGGG-------TTCTCATAGAGCAGGTCGGAGGCTGTCCTGCTGTATAGCCCCCTGGACAATCTGTACAAACTGCACAGTAATTTTACCACCTTAGCAGAATTTCCATAAACTGGATTATATTATAATGGGTTTTT----TGTGTTTTTAATCTTAAAACTCAGAGTCAATACT----C-----------TTT- i colAng1.NW_012118821v1 C 0 I 1 s calJac3.chr14 1328289 363 - 108792865 accatgagggaagatgggcaga-cgtaggcattccccctgccacacacctggaactggtcagttcacacaggaaacg-gatgttttgttctgggagcc-tgttttaagaaggacactgacacactggTTCCCAGGAGGTGGTCACTTTTGTA----TCAGATGCTTCCTTTAAAACACAACTTCACAACACGTGTCTGGAATTAGGC-------TTTTCATAGAGCACGTGGGAAGCTGT-CTGCTGGGCAGCC--CTGGACAGTCTGTA-AAAGTGCACAGTAATATTACCACCTTAGCAGAATTTCCATAAACTGGATTATTTTATAATGGTTTCTGCGTGTGTGTTTTTAATCTTAAAACTCAGAGGCAATACT----C-----------TTA- i calJac3.chr14 C 0 I 5 s saiBol1.JH378218 1179917 364 - 7082604 accatgagggatgatgggcaga-catgggcatttcccctgccacacgccccgaaccggtcagttcacacaggaaacgtggtgttttgttctgggagcc-tgttttaagaaggtcagtgacacacaggCTCCCAGCAGGTGCTCACTTTTGTA----TCAGATGCTTCCTTTAAAACACAACCCCACAACGCGTGTCCAGAATTAGGA-------TTTTCATAGAGCATGTGGGAAGCTGT-CTGCTGTGCAGCC--CTGGACAATCTGTA-GAAGTGCACAGTAATTTTACCACCTTAGCAGAATTTCCACAAACTGGATTATTTTATAATGGTTTCTGTGTGTGTGTTTTTAATCTTAAAACTCAGAGGCAATACT----C-----------TTA- i saiBol1.JH378218 C 0 I 5 s cebCap1.NW_016107827v1 1272391 367 + 1864846 accatgagggaagaagggcaga-catgggcatt-cccctgccacacgcctggaacctgtcagttcacacaggaaatgtggtgttttattctgggagcc-tgttttaagaaggacactgacacacgggTTCCCAGCAGGTGGTCACTTTTGTA----TCCGATGCTTCCTTTAAAACACAACTCCACAACACGTGTCCAGAATTAGGA-------TTTTCATAGAGCATGTGGGAAGCTGT-CTGCTGTGCAGCC--CTGGACAATCTGTA-AAAGTGTACAGTAATTTTACCACCTTAGCAGACTTTCCATAAACTGGATTATTTTATAATGGTTTCTCTGTGTGTGTTTTTAATCTTAAAACTCTGAGGCAATACTCTTAC-----------TTA- i cebCap1.NW_016107827v1 C 0 I 5 s aotNan1.NW_018513311v1 61089 361 + 287728 accatgagggaagatgggcaga-catgggcattccccctgccacacgccgggaacctgtcagttcacacaggaaatgtggcgttttgttctgggagcc-tgttttaagaaggacactgacacactggTTCCCAGCAGGTGGTCACTTTTGTA----TCAGATGCTTCCTTTAAAACACAACTCCACAACACGTGTCCAGAATTAGCA-------TTTTCATAGAGCATGTGGGCAGGTGT-CTGCCGTGCAGCC--CTGGACAATCTGTA-AAAGTG-------ATTTTACCACGTTAGCAGAATTTCCATAAACTGGATTATTTTATAATGGTTTCTGTGTGTGTGTGTTTGATCTTAAAACTCAGAGGCAATACTCTTAC-----------TTA- i aotNan1.NW_018513311v1 C 0 I 5 s dasNov3.JH576208 1613121 380 + 4416731 gaagtgatagataaagggaagaccaaaaaagtaataaccacaatataccctgcgttggtgaattcacttacggactatagta-ctcattctgggtgctgtgctttaagaagaaaactgatttactgCTCCCAAATAA----TCACTTCTGTAAGTGTAATATGCTTTTGATAAAGTACAACTCTCCAGTGTGTATTAAGGATTAAGATAGatatttaaaatatattaattaGGTAGCTGGTCTATTTTAAAGCC--CTGGACAATTGGTGAAAAGAGCATAATAATTGTACCATTTTACCAGAATCTCCATAGATTGGTTTACAATGTTCT--TTTTTT----TGATGTTTTTATTTTAAAACTCGAAAGTAATACT----CACATTACTTAATTTC i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89956681 3538 - 120129022 I e otoGar3.GL873658 910920 20 + 5252280 I a score=2122468.000000 s hg38.chr2_KI270774v1_alt 56216 254 + 223625 CTCACTATTAATA------GAGTGTACATATGGGAGTTTGGGTATAAACACGGGATAGAATAAATATAACTGACCTTATACATGTATCCTACACACTATCTCTACTATGTCA---TTTTTTTCTCTGTGAAACTGTGTGAGTCTGGGTGGGACGTAGCATAAGACGGACTACAT-----------GACTCTTCGAAATTCAGGTTACCCCAAATCTTTTCCAACAGGACAATCTTT-------TTAAAAGCACAGATAGATGAATACCTACTTTGTGCAGG s panTro5.chr2A 1333497 256 + 111504155 CTCACTATTAATA----CAGAGTGTACATATGGGAGTTTGGGTATGAACACGGGATAGAATAAATATAACTGACCTTATACATGTATCCTACACACTAGCTCTACTATGTCA---TTTTTTTCTCTATGAAACTGTGTGAGTCTGGGTGGGACGTAGCATAAGACGGGCTACAT-----------GACTCTTCGAAATTCAGGTTACCCCAAATCTTTTCCAACAGGACAATCTTT-------TTAAAAGCACAGATAGATGAATACCTACTTTGTGCAGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1293956 256 + 114371477 CTCACTATTAATA----CAGAGTGTACATATGGGAGTTTGGGTATGAACACGGGATAGAATAAATATAACTGACCTTATACATGTATCCTACACACTAGCTCTACTATGTCA---TTTTTTTCTCTATGAAACTGTGTGAGTCTGGGTGGGACGTAGCATAAGACGGGCTACAT-----------GACTCTTCGAAATTCAGGTTACCCCAAATCTTTTCCAACAGGACAATCTTT-------TTAAAAGCACAGATAGATGAATACCTACTTTGTGCAGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1318829 256 + 1464242 CTCACTATTAATA----CAGAGTGTACATATGGGAGTTTGGGTATGAACACGGGATAGAATAAATATAACTGACCTTATACATGTATCCTACACACAATCTCTACTATGTCA---TTTTTTTCTCTATGAAACTGTGTGAGTCTGGGTGGGACGTAGCATAAGACGGGCTACAT-----------GACTCTTCGAAATTCAGGTTACCCCAAATCTTTTCCAACAGGACAATCTTT-------TTAAAAGCACAGATAGATGAATACCTACTTTGTGCAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1050566 252 + 81552678 CTCAGTATTAATAAA--AATAGTGTACATATGGGAGTTTGGGTATGAACACG-----GAATAAATATAACTGACCTTATACATGTATCCTACACACTATCTCTACTATGTCA----TTTTTTCTCTATGAAACTGTGTAAGTCTGGGTGGGATGCAGCGGGAGACGGGCTACGT-----------GACTCTTCGAAATTCAGGTTACCCCAAATCTTTTCCAACAGGACAATCTTT-------TAAAAAGCGCAGATAGATGAATACCTACTTTGTGCAGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1379198 258 + 108979918 CTCAGTATTAATAAAAAGAGAGTGCACATATGGGAGTTTGGGTATGAATACGGGATAGAATAAATATAACTGACCTTATACATGTATCCTACACACTATCTCTACTATGTCA---TTTTTTTCCCTATGAAACTGTGTGAGTCTGGGTGGGATGTAATGAAAGACAGGCTACGT-----------GAGTCTTCGAAATTCAGGTTATCCCAAATCTTTTCCAACATGACAATCTTT-------TAAAAAGCAT--ATAGAGGAATACCTACTTTGTGCAGG i rheMac8.chr13 I 1 C 0 s macFas5.chr13 1351462 258 - 111193037 CTCAGTATTAATAAAAAGAGAGTGCACATATGGGAGTTTGGGTATGAATACGGGATAGAATAAATATAACTGACCTTATACATGTATCCTACACACTATCTCTACTATGTCA---TTTTTTTCCCTATGAAACTGTGTGAGTCTGGGTGGGATGTAATGAAAGACAGGCTACGT-----------GAGTCTTCGAAATTCAGGTTATCCCAAATCTTTTCCAACATGACAATCTTT-------TAAAAAGCAT--ATAGAGGAATACCTACTTTGTGCAGG i macFas5.chr13 I 1 C 0 s macNem1.NW_012011978v1 1379701 258 + 3644372 CTCAGTATTAATAAAAAGAGAGTGCACATATGGGAGTTTGGGTATGAATACGGGATAGAATAAATATAACTGACCTTATACATGTATCCTACACACTATCTCTACTATGTCA---TTTTTTTCCCTATGAAACTGTGTGAGTCTGGGTGGGATGTAATGAAAGACAGGCTACGT-----------GAGTCTTCGAAATTGAGGTTATCCCAAATCTTTTCCAACATGACAATCTTT-------TAAAAAGCAT--ATAGAGGAATACCTACTTTGTGCAGG i macNem1.NW_012011978v1 I 1 C 0 s cerAty1.NW_012000820v1 1333405 258 - 10304083 CTCAGTATTAATAAAAAGAGAGTGCACATATGGGAGTTTGGGTATGAATACGGGATAGAATAAATATAACTGACCTTATACATGTATCCTACACACTATCTCTACTATATCA---TTTTTTTCCCTATGAAACTGTGTGAGTCTGGGTGGGATGTAATGAAAGACAGGCTACGT-----------GAGTCTTCGAAATTCAGGTTATCCCAAATCTTTTCCAACATGACAATCTTT-------TAAAAAGCAT--AGAGATGAATACCTACTTTGTGCAGG i cerAty1.NW_012000820v1 I 1 C 0 s chlSab2.chr14 1404790 256 - 107702431 CTCAGTATTAATAAAAAGAGAGTGCACATTTGGGAGTTTGGGTGTGAATGCTGGATAGAATAAATATAACCGACCTTATACATGTATCCTACACACTA--TCTACTATGTCA---TTTTTTTCCCTATGAAACTGTGTGAGTCTGGGTGGGATGTAATGAAAGACAGGCTACGT-----------GAGTCTTCGAAATTCAGGTTATCCCAAATCTTTTCCAACATGACAATCTTT-------TAAAAAGCAT--ATAGATGAATACCTACTTTGTGCAGG i chlSab2.chr14 I 225 C 0 s manLeu1.NW_012103754v1 882088 256 - 2200435 CTCAGTATTAATAAAA--AGAGTGCACATATGGGAGTTTGGGTATGAATACGGGATAGAATAAATATAACTGACCTTATACATGTATCCTACACACTATCTCTACTATGTCA---TTTTTTTCCCCATGAAACTGTGTGAGTCTGGGTGGGATGTAATGAAAGACAGGCTACGT-----------GAGTCTTCGAAATTCAGGTTATCCCAAATCTTTTCCAACATGACAATCTTT-------TAAAAAGCGT--AGAGATGAATACCTACTTTGTGCAGG i manLeu1.NW_012103754v1 I 1 C 0 s colAng1.NW_012118821v1 1320218 249 - 13651311 CTCAGTATTAATAAAAACAGAGTGCACATATGGGAGTCTGGGTATGAATACGGGATAGAATAAATATAACTGACCTTATACATGTAT-----ACACTATCTCTACTATGTCA---TTTTTTTCCCTATGAAACTGTGTGAGTCTGGGTGGGATGT----AGAGAAAGGCTACGT-----------GAGTCTTCGAAATTCAGGTTATCCCAAATCTTTTCCAACATGACAATCTTT-------TAAAAAGCAT--ATAGATGAATACCTACTTTGTGCAGG i colAng1.NW_012118821v1 I 1 C 0 s calJac3.chr14 1328657 261 - 108792865 CTCAGTATTAATAAAA-CAGAGTGCACATGTGGGAGCTTGGGTGTGAATACGGGGTGGAGTGAGTATCACTGACCTTATACGTGTATCCCCCACACTATCCT----GTGTCATCCTCCTTCTCTCTATGAAAGGGTCGGAGTCTGGGTGGGGCGCAGCGCAAGACGGGCTACATCGCTGGGCTACGAGACTCTGAAATTCAGGTTACCCAAAATCTCATCCAACAGGACATTCTTT-------TAAAAAGTGCAGATAAATGAATACCTACTT-------- i calJac3.chr14 I 5 C 0 s saiBol1.JH378218 1180286 250 - 7082604 CTCAGTATTAATAAAA-CAGAGTGCACATACGGGAGCTTGGGTGTGAACACAGGGTGGAGTAAATATCCCTGACGTCATACGTGTATTGCACACGCTACCTT-------------TTCATTCCTCTAT-CAAGTGTGTGAGTCTGGGTGGGGCGGAGCGCAGGACGGGCTGCATCGCTGGCCTACGAGACTCTGAAATTCAGGTTACCCAAGATCTCAT-CAACAGGACATTCTTT-------TTAAAAGTGCAGATAAATGAATACCTACTT-------- i saiBol1.JH378218 I 5 C 0 s cebCap1.NW_016107827v1 1272763 263 + 1864846 CTCAGTATTAATAAAA-CAGAGTGCACATACGGGAGCTTGGGTGTGAACACAGGGTGGAGTAAATATCCCTGACCTCATACGTGTATCATACACACTACCTTTCCTGTGTCATCATTCTTTCCTCTATGAAAGTGTATGAGTCTGGG-GGGTCGTAGCGCAGGACGGGCTGCATCGCTGGGCTACGAGACTCTGAAATTCAGGTTACCCTGAATCTCAT-CAACAGGACATTCTTT-------TAAAAAGCGCAGATAAATGAATACCTACTT-------- i cebCap1.NW_016107827v1 I 5 C 0 s aotNan1.NW_018513311v1 61455 258 + 287728 CTCAGTATTAATAAAA-CAGAGTGCACATACGGGAGCTTGGGTGTGAATACAGGGTAGAATAAATATCGCCGACCGTACACGTGTATCCCACACACTATCTTTCCTGTG-------TCTTCTCTCTATGAAAGTCTGTGAGTCTGCGTGGGGCGTAGCACAAGACGGGCTACATCGCTGGGCTACGAGACTCTGAAATTCAGGTTACGCAAAATCTCATCCAACAGGACATTCTTT-------TAAAAAGCGCGAGTAAATGAATACCTACTT-------- i aotNan1.NW_018513311v1 I 5 C 0 s dasNov3.JH576208 1613501 220 + 4416731 CCCAGTCTTGATGAAAACAGGGTGCATATTTGGAAGTTGGTATATGAATAAGGCA-GGACAAAACTTAACTGACTTTCTATGTGTACTGTGCACACTATCTCTA----GTCT-----------------------TGAGGGTCT-----------------AGCAGGACTAGGT-----------AAATTTCTG-AATTCATCTTACCGAGAATTTTGTCCTGAAGGACAGTCATTTATCCTGTACAAAGCACCTATGGATGCATTCC----CTGTGCAGG i dasNov3.JH576208 C 0 I 599 e mm10.chr12 89956681 3538 - 120129022 I e otoGar3.GL873658 910920 20 + 5252280 I a score=6600.000000 s hg38.chr2_KI270774v1_alt 56470 1 + 223625 G s panTro5.chr2A 1333753 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1294212 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1319085 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1050818 1 + 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1379456 1 + 108979918 G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1351720 1 - 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1379959 1 + 3644372 G i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1333663 1 - 10304083 G i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1405046 1 - 107702431 G i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 882344 1 - 2200435 G i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1320467 1 - 13651311 G i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 61713 0 + 287728 C e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1180536 0 - 7082604 C e cebCap1.NW_016107827v1 1273026 0 + 1864846 C e otoGar3.GL873658 910920 20 + 5252280 I e dasNov3.JH576208 1613721 599 + 4416731 I e calJac3.chr14 1328918 0 - 108792865 C a score=10796942.000000 s hg38.chr2_KI270774v1_alt 56471 1210 + 223625 TATATAATAATGAAATGTCACAGAAAACTCAAACACAGGAAAGTGTGG-GTGGCAGTTTTAC-CATTGTGGGAATGATCCCCCATCCAGGGCACAGCCTCAGCATCTTTTCCTATGCCTTTAACTTCAAAGGTCCATGGACAGTCCAAGCTC-CAGGCCCAGAGGTATTACAATACGCAAACTAAAATACAGTTGTTTGTGGTGAAGAAAAAGTTGAAACAGTTTTAAGATGAATATATGTAGCTTCAAAATACTTAAGCCAACTGTAGATGATATTGTAAAAGA-----TAAGCTGCT-ACCTGAAACCTATCTTGATGGGCCATTTCAGTTTCAGAACTAACATGCTGAGTGTTGTAAAC---AGCAGTTCTTGCCCCATGGCAGATCTAAAAGTGC-TGTGTCCGTTG-----------------------GGAAGAAGAACGGTATTTAAAAGCCGTCTGAAATAAGCCTCATGGGAAA----ACAAGTCCACTG-----CCGCCCCTCCCACAGTCTCTCCGCTC---TCCCTGCATCAGCCAGTGGTTCACACTGAGGACACACAGGTGA-ATCACGTT----GAGAATTCCCAGCAGAACC-GTAGTTTTCTCCCCAGCTGGCATCTCAGATCAGCCCCGTGGCTGATTCCATGGTGGGC-GGGGAAAAGGGACCTACTTCACAATGACTTCCATCTGGGCCATGAGAGGAAGACTTGCCCCCGGCCAACAAGTATCCGAGAGCTGGAA---------AGGCCGC-GTGAGC-------------AAACAGAC-AAAACCTGCACTCGCCTCCCTTAAATTG-------------AGGGGAAATCCTGGAGAAACGCCTTGCACACTCAGAAACAAACAAGAGAGATGGTCACGGCGGCCAAGTCTGCAGTTCACCTCTGTGGCCACTTCCCTCTGGATGAAGCCCTCAGCCATGGTCTCCTCTTCACGAGGTTATAAGGAAAGATAATTCAGATGGAAATCT--TTTTTACCCAGCCTGCTGGAAATGCAATGATTG-------TTGCTACAAGGATTGAAGGCAATGGGCT-GGAAACACGCA-CCCAGCTCAGACCCTGCCTTCAGTCGGTGCCGGAATCCT-TCCTTG-----ACCCCAG--CCTCACCGTGAGACACCGGG-CC-CTTCACTCAGAAAGGGCTCCGTCAGTCAGC----------ACCTTGGCGGCCCACTACCCACCGTCCACCTGGTAGGATCTCTGTGTT-------TTCCTTTTCC------TTTTTACTGAACGGGCTGAATTTTTGAGCAAGTTAATCTTTTG-----------TTGTCATACACACAG s panTro5.chr2A 1333754 1211 + 111504155 TATATAATAATGAAATGTCACAGAAAACTCAAACAGAGGAAAGTGTGG-GTGGCATTTTTAC-CATTGTGGGAATGATCCCCCATCCAGGACACAGCCTCAGCAACTTTTCCTATGCCTTTAACTTCAAAGGTCCGTGGACAGTCCAAGCTC-CAGGCCCAGAGGTATTACAATACGCACACTAAAATACAGTTGTTTGTGGTGAAGAAAAAGTTGAAACAGTTTTAAGATGAATATATGTAGCTTCAAAATACTTAAGCCAACTGTAGATGATATTGTAAAAGA-----TAAGCTGCT-ACCTGAAACCTATCTTGATGGGCCATTTCAGTTTCAGAACTAACATGCTGAGTGTTGTAAAC---AGCAGTTCTTGCCCCATGGCAGATCTAAAAGTGCCTGTGTCCGTTG-----------------------CGAAGAAGAACGGTATTTAAAAGCCGTCTGAAATAAGCCTCATGGGAAA----ACAAGTCCACTG-----CCGCCCCTCCCACAGTCTCTCCGCTC---TCCCTGCATCAGCCAGTGGCTCACACTGAGGACACACAGGTGA-ATCACGTT----GAGAATTCCCAGCAGAACC-GTAGTTTTCTCCCCAGCTGGCATCTCAGATCAGCCCCGTGGCTGATTCCATGGTGGGC-GGGGAAAAGGGACCTACTTCACAATGACTTCCATCTGGGTCATGAGAGGAAGAATTGCCCCCGGCCAACAAGTATCCGAGACCTGGAA---------AGGCCGC-GTGAGC-------------AAACAGAC-AAAACCTGCACTCGCCTCCCTTAAATTG-------------AGGGGAAATCCTGGAGAAACGCCTTGCACACTCAGAAACAAACAAGAGAGATGGTCACGGCGGCCAAGTCTGCAGTTCACCTCTGTGGCCACTTCCCTCTGGATGAAGCCCTCAGCCATGGTCTCCTCTTCACGAGATTATAAGGAAAGATAATTGAGATGGAAACCT--TTTTTACCCAGACTGCTGGAAATGCAATGATGG-------TTACTACAAGGATTGAAGGCAATGGGCT-GGAAACACGCA-CCCAGCTCAGACCCTGCCTTCAGTCAGTGCCGGAATCCT-TCCTTG-----ACCCCAG--CCTCACCGTGAGACACCGGG-CC-CTTCACTCAGAAAGGCCTCCGTCAGTCAGC----------ACCTTGGCCGCCCACTACCCACCGTCCACCTGGTAGGATTTCTGTGTT-------TTCCTTTTCC------TTTTTACTGAACGGGCTGAATTTTTGAGCAAGTTAATCTTTTG-----------TTGTCATACACACAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1294213 1211 + 114371477 TATATAATAATGAAATGTCACAGAAAACTCAAACAGAGGAAAGTGTGG-GTGGCATTTTTAC-CATTGTGGGAATGATCCCCCATCCAGGACACAGCCTCAGCAACTTTTCCTATGCCTTTAACTTCAAAGGTCCGTGGACAGTCCAAGCTC-CAGGCCCAGAGGTATTACAATACGCACACTAAAATACAGTTGTTTGTGGTGAAGAAAAAGTTGAAACAGTTTTAAGATGAATATATGTAGCTTCAAAATACTTAAGCCAACTGTAGATGATATTGTAAAAGA-----TAAGCTGCT-ACCTGAAACCTATCTTGATGGGCCATTTCAGTTTCAGAACTAACATGCTGAGTGTTGTAAAC---AGCAGTTCTTGCCCCATGGCAGATCTAAAAGTGCCTGTGTCCGTTG-----------------------CGAAGAAGAACGGTATTTAAAAGCCGTCTGAAATAAGCCTCATGGGAAA----ACAAGTCCACTG-----CCGCCCCTCCCACAGTCTCTCCGCTC---TCCCTGCATCAGCCAGTGGCTCACACTGAGGACACACAGGTGA-ATCACGTT----GAGAATTCCCAGCAGAACC-GTAGTTTTCTCCCCAGCTGGCATCTCAGATCAGCCCCGTGGCTGATTCCATGGTGGGC-GGGGAAAAGGGACCTAGTTCACAATGACTTCCATCTGGGTCATGAGAGGAAGAATTGCCCCCGGCCAACAAGTATCCGAGACCTGGAA---------AGGCCGC-GTGAGC-------------AAACAGAC-AAAACCTGCACTCGCCTCCCTTAAATTG-------------AGGGGAAATCCTGGAGAAGCGCCTTGCACACTCAGAAACAAACAAGAGAGATGGTCACGGCGGCCAAGTCTGCAGTTCACCTCTGTGGCCACTTCCCTCTGGATGAAGCCCTCAGCCATGGTCTCCTCTTCACGAGATTATAAGGAAAGATAATTGAGATGGAAATCT--TTTTTACCCAGACTGCTGGAAATGCAATGATGG-------TTACTACAAGGATTGAAGGCAATGGGCT-GGAAACATGCA-CCCAGCTCAGACCCTGCCTTCAGTCAGTGCCGGAATCCT-TCCTTG-----ACCCCAG--CCTCACCGTGAGACACCGGG-CC-CTTCACTCAGAAAGGCCTCCATCAGTCAGC----------ACCTTGGCCGCCCACTACCCACCGTCCACCTGGTAGGATTTCTGTGTT-------TTCCTTTTCC------TTTTTACTGAACGGGCTGAATTTTTGAGCAAGTTAATCTTTTG-----------TTGTCATACACACAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1319086 1210 + 1464242 TATATAATAATGAAATGTCACAGAAAACTCAAACACAGGAAAGTGTGG-GTGGCATTTTTAC-CATTGTGGGAATGATCCCCCATCCAGGACACAGCCTCAGCATCTCTTCCTATGCCTTTAACTTCAAAGGTCCATGGACAGTCCAAGCTC-CAGGCCCAGAGGTATTACAATACGCACACTAAAATACAGTTGTTTGTGGTGAAGAAAAAGTTGAAACAGTTTTAAGACGAATATATGTAGCTTCAAAATACTTAAGCCAACTGTAGATGATATTCTAAAAGA-----TAAGCTGTT-ACCTGAAACCTATCTTGATGGGCCATTTCAGTTTCAGAACTAACGTGCTGAGTGTTGTAAAC---AGCAGTTCTTGCCCCGTGGCAGATCTAAAAGTGCCTGTGTCCGTTG-----------------------GGAAGAAGAACGGTATTTAAAAGCCGTCTGAAATAAGCCTCATGGGAAA----ACAAGTCCACTG-----CCGCCCCTCCCACAGTCTCTCCGCTC---TCCCTGCATCAGCCAGTGGTTCACACTGAGGACACACAGGTGA-ATCACGTT----GAGAATTCCCAGCAGAACC-GTAGTTTTCTCCCCAGCTGGCATCTCAGATCAGCCCCGTGGCTGATTCCATGGTGGGC-GGGGAAAAGGGACCTACTTCACAATGACTTCCATCTGGGTCATGAGAGGAAGAATTGCCCCCGGCCAACAAGTATCCGAGACCTGGAA---------AGGCCAC-GTGAGC-------------AAACAGAC-AAAACCTGCACTCCCCTCCCTTAAATTG-------------AGGGGAAATCCTGGAGAAACGCCTTGCACACTCAGAAACAAACAAGAGAGATGGTCACGGTGGCCAAGTCTGCAGTTCACCTCTGTGGCCACTTCCCTCTGGATGAAGCCCTCAGCCATGGTCTCCTCTTCACGAGATTATAAGGAAAGATAATTCAGATGGAAATC---TTTTTACCCAGACTGCTGGAAATGCAATGATTG-------TTACTACAAGGATTGAAGGCGATGGGCT-GGAAACACGCA-CCCAGCTCAGACCCTGCCTTCAGTCGGTGCCGGAATCCT-TCCTTG-----ACCCCAG--CCTCACCGTGAGACACCGGG-CC-CTTCACTCAAAAAGGGCTCCGTCGGTCAGC----------ACCTTGGCGGCCCACTACCCACCTTCCACCTGGTAGGATTTCTGTGTT-------TTCCTTTTCC------TTTTTACTGAACGGGCTGAATTTTTGAGCAAGTTAATCTTTTG-----------TTGTCATACACACAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1050819 1211 + 81552678 TATATAATAATGAAATGTCACAGAAAACTCAAACAGAGGAAAGTGTGG-GTGGCATTTTTAC-CACTGCGGGAATGGTCCCCCATCCAGGACACAGCCTCAGCATCTTTTCCTATGCCTTTAACTTCAAAGGTCCATGGACAGTCCAAGCT--CAGGCCCAGAGGTATTACAACATGCACACTTAGATACAGTTGTTTGTGGTGAAGAAAAAGTCGAAACAGTTTTCAGATGAATATATGTAGCTTCAAAATACTTAAGCCAACTGTAGATGATATTCTAAAAGA-----TAAGCTGTT-ACCTGAAACATATCTTGATGGGCCATTTCAGTTTCAGAACTAACATTCTGAGTGTTGTAAAC---AGCAGTTCTTGCCCAGTGGCAGATCTAAAAGTGCCTGTGTCCATTG-----------------------GGAAGAAGAACGGTATTTAAAAGCCGTCTGAAATAAGCCTCGTGGGAAA----ACAAGTCCACTG-----CCGCCCCTCCCACAGTCTCTCCGCTC---TTCCTGCATCAGCCAGTGGTTCACATTGAGGACACACAGGTGA-ATCACATT----GAGAATTCCCAGCAGCACC-GTAGTTTTCTCCCCGGCTGGCATCTCAGATCAGCCCCGTGGCTGATTCCACGGTGGGTGGGGGAAAAGGGACCTACTTCACAACGATTTCCATCTGGGTCATGAGAGGAAGAATTGCCCCCGGCTAGCAAGTATCCGAGACCTGGAA---------AGGCCGC-GTGAGC-------------AAACAGAC-AAAACCTGCACTCGCCTTCCTTAAACTG-------------AGGGGAAATCCTGGAGAAACGCCTTGCACGCTCAGAAACAAACGAGAGAGATGGTCACGGTGACCAAGTCTGCAGGTCACCTCTGTGGCCACTTCCCTCTGGATGAAGCCCTCAGCCATGGTCTCCTCTTCATGAGATTATAAGGAAAGATAATTCAGATGGAAATCT--TTTTTACCCAGACTGTTGGAAATGCAATGATTG-------TTACTGCAAGGATTGAAGGCAATGGGCT-GGAAACACGCA-CCCGGTTCAGACCCTGCCTTCAGCCGGTGCCGGAATCCT-TCCTCG-----ACCCCAG--CCTCACCGTGAGACACCTGG-CC-CTTCACTCAGAAAGGGCTCCATCAGTCAGC----------ACCTTGGCAACCCACTACCCACCGTCCACCTGGTAGGATTTCTGTGTT-------TTTGTTTTCC------TTTTTACTGAACGGGCTGAATTGTTGATAAAGTTAATCTTTTG-----------TTGTCATACACAAAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1379457 1197 + 108979918 TATGTAATAATGAAATGTCACAGAAAACTC--ACAGAAGAAAGTGGGG-GTGGCATTTTCAC-CATTGTGGGAATGATCCGCCATCCAGGACACAGCCTCAGCATCTTTTCCTGTGCCTTTAACTTCAAAGGTCCACGGATAGTCCAAGCTC-CAGGCCGGCAGGTATCACGATACGCACACTTACATACAGTTGTTTGTGGTGAAGAAAAAGTCGAAACAGTTTTAAGATGAATATATGTAGCTTCAAAATAATTAAGCCAACTGTAGATGATATTCTAAAAGA-----TAAGCTGTT-ACCTGAAACATATCTTGATGGGCCGTTTCAGTTCCAGAACTAATGTGCTGAGTGTTGTAAAC---AGCAGTTCTTGCCCAGTGGCAGATCTAAAAGCGCCTGTGTCCGTTG-----------------------GGAAGAAGAACGGTATTTAAAAGCCGCCTGAAATAAGCCACGTGGGAAA----ACAAGTCCACTG-----CCGCCGCTCCCACAGTCTCTCCGCTC---TCCCTGCATCAGCCAGTGGCTCACACTGAGGACGCACAGGTGAAATCACGTT----GAGAATTCCCAGCAGAACC-GTAGTTTTCTCCCGGGCTGGTGTCTCCAATCAGCCCTGTGGCTG-TTCCACGGTGGGC-GGGGGAAAGGGA---GCTTCGCAATGATTTCCATCTGGGTCAGGAGAGGAAGAATTGCCCCTGGCCAGCAAGTATCCAAGACCTGGAA---------AGGCCGT-GTGAGC-------------AAACAGACAAAAACCTGCACTCGCCTTCCTTAAACTG-------------AGGGGAAATCCTGGAGAAACGCCTTGCACACTCAGAAGCAAACGAGGGAGATGGTCACGGTGGCCAAGTCTACAGGTCACCTCTGTGGCCACTTCCCTCTGGATGAAGCCCTCAGCCGTGGTCTCCTCTTCACAAGACTATAAGGAAAGATAATTCAGATGGAAATCT--TTTTTACCCTGACTGTTGGAAATGCAATGATTG-------TTACTTCAAGGATTGAAGGCAAAGGACT-GGAAACACGCA-CTCAGCTCAGCCCCTGCCTTCAGCCGGCGCCAGAATCCT-TCCTTG-----ACCCCAG--CCTCACCGTGAGACACCCGG-CC-CTTCACTTAGAAAAGGCTCCATCAATCAGC----------ACCTTGGCGG-CCACTACCCACCGTCCACCTGGTAGGAGTTCTGTGTT-------TTCCTTTTTC------TTCTTACTGAACGGGCTGAATTTTTGAGAAAGTTAATCTTTTG-----------TTGTCA--------- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1351721 1199 - 111193037 TATGTAATAATGAAATGTCACAGAAAACTCAAACAGAAGAAAGTGGGG-GTGGCATTTTCAC-CATTGTGGGAATGATCCGCCATCCAGGACACAGCCTCAGCATCTTTTCCTGTGCCTTTAACTTCAAAGGTCCACGGATAGTCCAAGCTC-CAGGCCGGCAGGTATCACGATACGCACACTTACATACAGTTGTTTGTGGTGAAGAAAAAGTCGAAACAGTTTTAAGATGAATATATGTAGCTTCAAAATAATTAAGCCAACTGTAGATGATATTCTAAAAGA-----TAAGCTGTT-ACCTGAAACATATCTTGATGGGCCGTTTCAGTTCCAGAACTAACGTGCTGAGTGTTGTAAAC---AGCAGTTCTTGCCCAGTGGCAGATCTAAAAGCGCCTGTGTCCGTTG-----------------------GGAAGAAGAACGGTATTTAAAAGCCGCCTGAAATAAGCCACGTGGGAAA----ACAAGTCCACTG-----CCGCCGCTCCCACAGTCTCTCCGCTC---TCCCTGCATCAGCCAGTGGCTCACACTGAGGACTCACAGGTGAAATCACGTT----GAGAATTCCCAGCAGAACC-GTAGTTTTCTCCCGGGCTGGTGTCTCCAATCAGCCCTGTGGCTG-TTCCACGGTGGGC-GGGGGAAAGGGA---GCTTCGCAATGATTTCCATCTGGGTCAGGAGAGGAAGAATTGCCCCCGGCCAACAAGTATCCGAGACCTGGAA---------AGGCCGT-GTGAGC-------------AAACAGACAAAAACCTGCATTCGCCTTCCTTAAACTG-------------AGGGGAAATCCTGGAGAAACGCCTTGCACACTCAGAAGCAAACGAGGGAGATGGTCACGGTGGCCAAGTCTACAGGTCACCTCTGTGGCCACTTCCCTCTGGATGAAGCCCTCAGCCGTGGTCTCCTCTTCACAAGACTATAAGGAAAGATAATTCAGATGGAAATCT--TTTTTACCCTGACTGTTGGAAATGCAATGATTG-------TTACTTCAAGGATTGAAGGCAAAGGACT-GGAAACACGCA-CTCAGCTCAGCCCCTGCCTTCAGCCGGCGCCAGAATCCT-TCCTTG-----ACCCCAG--CCTCACCGTGAGACACCCGG-CC-CTTCACTTAGAAAAGGCTCCATCAATCAGC----------ACCTTGGCGG-CCACTACCCACCGTCCACCTGGTAGGAGTTCTGTGTT-------TTCCTTTTTC------TTCTTACTGAACGGGCTGAATTTTTGAGAAAGTTAATCTTTTG-----------TTGTCA--------- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1379960 1199 + 3644372 TATGTAATAATGAAATGTCACAGAAAACTCAAACAGAAGAAAGTGGGG-GTGGCATTTTCAC-CATTGTGGGAATGATCCGCCATCCAGGACACAGCCTCAGCATCTTTTCCTGTGCCTTTAACTTCAAAGGTCCACGGATAGTCCAAGCTC-CAGGCCGGCAGGTATCACGATACGCACACTTACATACAGTTGTTTGTGGTGAAGAAAAAGTCGAAACAGTTTTAAGATGAATATATGTAGCTTCAAAATAATTAAGCCAACTGTAGATGATATTCTAAAAGA-----TAAGCTGTT-ACCTGAAACATATCTTGATGGGCCGTTTCAGTTCCAGAACTAATGTGCTGAGTGTTGTAAAC---AGCAGTTCTTGCCCAGTGGCAGATCTAAAAGCGCCTGTGTCCGTTG-----------------------GGAAGAAGAACGGTATTTAAAAGCCGCCTGAAATAAGCCACGTGGGAAA----ACAAGTCCACTG-----CCGCCGCTCCCACAGTCTCTCCACTC---TCCCTGCATCAGCCAGTGGCTCACACTGAGGACGCGCAGGTGAAATCACGTT----GAGAATTCCCAGTAGAACC-GTAGTTTTCTCCCGGGCTGGTGTCTCCAATCAGCCCTGTGGCTG-TTCCACGGTGGGC-GGGGGAAAGGGA---GCTTCGCAATGATTTCCATCTGGGTCAGGAGAGGAAGAATTGCCCCTGGCCAACAAGTATCCGAGACCTGGAA---------AGGCCGT-GTGAGC-------------AAACAGACGAAAACCTGCACTCGCCTTCCTTAAACTG-------------AGGGGAAATCCTGGAGAAACGCCTTGCACACTCAGAAGCAAACGAGGGAGATGGTCACGGTGGCCAAGTCTACAGGTCACCTCTGTGGCCACTTCCCTCTGGATGAAGCCCTCAGCCGTGGTCTCCTCTTCACAAGACTATAAGGAAAGATAATTCAGATGGAAATCT--TTTTTACCCTGACTGTTGGAAATGCAATGATTG-------TTACTTCAAGGATTGAAGGCAAAGGACT-GGAAACACGCA-CTCAGCTCAGCCCCTGCCTTCAGCCGGCGCCAGAATCCT-TCCTTG-----ACCCCAG--CCTCACCGTGAGACACCCGG-CC-CTTCACTTAGAAAAGGCTCCATCAATCAGC----------ATCTTGGCGG-CCACTACCCACCGTCCACCTGGTAGGAGTTCTGTGTT-------TTCCTTTTTC------TTCTTACTGAATGGGCTGAATTTTTGAGAAAGTTAATCTTTTG-----------TTGTCA--------- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1333664 1191 - 10304083 TATGTAATAATGAAATGTCACAGAAAACTC----AGAAGAAAGTGGGG-GTGGCATTTTCAC-CATTGTGGGAACGATCCCCCATCCAGGACACAGCCTCAGCATCTTTTCCTGTGCCTTTAACTTCAAAGGTCCACGGATAGTCCAAGCTC-CAGGCCCGCAGGTATCACAATACGCACACTTGCATACAGTTGTTTGTGGTGAAGAAAAAGTCGAAACAGTTTTAAGATGAATATATGTAGCTTCAAAATAATTAAGCCAACTGTAGATGATATTCTAAAAGA-----TAAGCTGTT-ACCTGAAACATATCTTGATGGGCCATTTCAGTTCCAGAAC----ATGCCGAGTGTTGTAAAC---AGCAGTTCTTGCCCAGTGGCAGATCTAAAAGTGCCTGTGTCCGTTG-----------------------GGGAGAAGAACGGTATTTAAAAGCAGCCTGAAATAAGCCACGTGGGAAA----ACAAGTCCACTG------CGCGGCTCCCACAGTCTCTCCGCTC---TCCCTGCATCAGCCAGTGGCTCACACTGAGGACGCACAGGTGATATCACGTT----GAGAATTCCCAGCAGAACC-GTAGTTTTCTCCCGGGCTGGCGTCTCCAATCAGCCCTGTGGCTG-TTCCACGGTGGGC-GGGGGAAAGGGA---GCTTCGCAATGATTTCCATCTGGGTCAGGAGAGGAAGAATTGCCCCCGGCCAACAAGTATCCGAGACCTGGAA---------AGGCCGC-GTGAGC-------------AAACAGACAAAAACCTGCACTCGCCTTCCTTAAACTG-------------AGGGGAAATCCTGGAGAAACGCCTTGCACACTCAGAAACAAACGAGGGAGATGGTCACGGCGGCCAAGTCTGCAGGTCACCTCTGTGGCCACTTCCCTCTGGATGAAGCCCTCAGCCGTGGTCTCCTCTTCACGAGTCTATAAGGAAAGATAATTCAGATGGAAATCT--TTTTTACCCTGACTGTTGGAAATGCAATGATTG-------TTACTGCAAGGATTGAAGGCAAAGGACT-GGAAACATGCA-CTCAGCTCAGACCCTGCCTTCAGCCAGCGCCAGAATCCT-TCCTTG-----ACCCCAG--CCTCACCGTGAGACACCTGG-CC-CTTCACTTAGAAAGAGCTCCATCAATCAGC----------ACCTTGGCGGCCCACTACCCACCGTCCACCTGGTAGGAGTTCTATGTT-------TTCCTTTTTC------TTCTTACTGAACGGGCTGAATTTTTGAGAAAGTTAATCTTTTG-----------TTGTCA--------- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1405047 1205 - 107702431 TATGTAATAATCAAATGTCACAGAAAACTCAAACAGAAGAAAGTGGGG-GTGGCATTTTCAC-CATTGTGGGAATGATCCTCCATCCAGGACACAGCCTCAGCATCTTTTCCTGTGCCTTTAACTTCAAAGGTCCATGAATAGTCCAAGCTC-CAGGCCCGCAGGTATCACAATACACACACTTACATACAGTTGTTTGTGGTGAAGAAAAAGTCGAAACAGTTTTAAGATGAATATACGTAGCTTCAAAATAATTAAGCCAACTGTAGATGATATTCTAAAAGA-----TAAGCTGTT-ACCTGAAACATATCTTGATGGGCCATTTCAGTTCCAGAACTAACATGCCGGGTGTTGTAAAC---AGCAGTTCTTGCCCAGTGGCAGATCTAAAAGCGCCTGTGTCCGTTG-----------------------GGAAGAAGAACGGTATTTAAAAGCCGTCTGAAATAAGCCATGTGGGAAA----ACAAGTCCACTG-----CCGCCGCTCCCACAGTCTCTCCACTC---TCCCTGCATCAGCCAGTGGCTCACACTGAGGACGCACAGGTGAAATCACATT----GAGAATTCCCAGCAGAACC-GTAGTTTTCTCCGGGGCTGGCATCTCCAATCAGCCCTGTGGCTG-TTCCATGGTGGGC-GGGGGAAAGGGACTTGCTTGGCAATCATTTCCATCTGGGTCATGAGAGGAAGAATTGCCCCTGGCCAACAAGTATCCGAGACCTGGAAAGGCCGCGTAGGCCGC-GTGAGC-------------AAACAGACAAAAACCTGCACTCGCCTTCCTTAAATTG-------------AGGGGAAATCCTGGAGAAACGCCTTGCACACTCAGAAACAAACGAGGGAGATGGTCACGGCGGCCAAGTCTGCAGGTCACCTCTGTGGCCACTTCCCTCTGGATGAAGCCCTCAGCCGTGGTCTCCTCTTCCCGGGACTGTAAGGAAAGATAATTCAGATGGAAGTAT--TTTTTACCCTGACTGTTGGAAATGCGATGATTG-------TTACTGCAAGGATTGAAGGCAAAGGACT-GGAAACACGCA-CTCAGCTCAGACCCTGCCTTCAGCCAGTGCCAGAAT------------------------CCTCACCGTGAGACACCTGG-CC-CTTCACTTAGAAAGGGCTCCATCAATCAGC----------ACCTTGGCGGCCCACTACCCAGCGTCCACCTGGTAGGAGTTCTGTGTT-------TTCCTTTTTC------TTCTTACTGAACGGGCTGAATTTTTGAGAAAGTTAATCTTTTG-----------TTGTCATACGCAAAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 882345 1195 - 2200435 TATGTAATAATGAAATGTCACAGAAAACT----CAGAAGAAAGTGGGG-GTGGCATTTTCAC-CATTGTGGGAATGATCCGCCATCCAGGACACAGCCTCAGCATCTTTTCCTGTGCCTTTAACTTCAAAGGTCCACGGATAGTCCAAGCTC-CAGGCCCGCAGGTATCACAATACGCACACTTACATACAGTTGTTTGTGGTGAAGAAAAAGTCGAAACAGTTTTAAGATGAATATATGTAGCTTCAAAATAATTAAGCCAACTGTAGATGATATTCTAAAAGA-----TAAGCTGTT-ACCTGAAACATATCTTGATGGGCCGTTTCAGTTCCAGAACTAACATGCCGAGTGTTGTAAAC---AGCAGTTCTTGCCCAGTGGCAGATCTAAAAGCGCCTGTGTCCGTTG-----------------------GGGAGAAGAACGGTATTTAAAAGCCGTCTGAAATAAGCCACATGGGAAA----ACAAGTCCACTG-----CCACCACTCCCACAGTCTCTCCGCTC---TCCCTGCATCAGCCAGTGGCTCACACTGAGGACGCACAGGTGAAATCACGTT----GAGAATTCCCAGCAGAACC-GTAGTTTTCTCCCGGGCTGGCGTCTCCAATCAGCCCTGTGGCTG-TTCCACGGTGGGC-GGGGGAAAGGGA---GCTTCGCAATGATTTCCATCTGGGTCAGGAGAGGAAGAATTGCCCCCGGCCAACAAGTGTCCGAGACCTGGAA---------AGGCCGC-GTGAGC-------------AAACAGACAAAAACCTGCACTCGCCTTCCTTAAACTG-------------AGGGGAAATCCTGGAGAAACGCCTTGCACACTCAGAAACAAACGAGGGAGATGGTCACGGCGGCCAAGTCTGCAGGTCACCTCTGTGGCCACTTCCCTCTGGATGAAGCCCTCAGCCGTGGTCTCCTCTTCACGAGACTATAAGGAAAGATAATTCAGATGGAAATCT--TTTTTACCCTGACTGTTGGAAATGCAATGATTG-------TTACTGCAAGGATTGAAGGCAAAGGACT-GGAAACACGCA-CTCAGCTCAGACCCTGCCTTCAGCCGGCGCCAGAATCCT-TCCTTG-----ACCCCAG--CCTCACCGTGAGACACCTGG-CC-CTTCACTTAGAAAGAGCTCCATCAATCAGC----------ACCTTGGCGG-CCGCTACCCACCGTCCACCTGGTAGGAGTTCTGTGTT-------TTCCTTTTTC------TTCTTACTGAACGGGCTGAATTTTTGAGAAAGTTAATCTTTTG-----------TTGTCA--------- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1320468 1212 - 13651311 TATGTAATAATGAAATGTCACAGAAAACTCAAACAGAAGAAAGTGGGG-GTGGCATTTTCAC-CATTGTGGGAATGATGCCCCATCCAGGACACAGCCTCAGCATCTTTTCCTGTGCCTTTAACTTCAAAGGTCCATGGATAGTCCAAGCTC-CAGGCCCGCAGGTATTACAATACACACACTTACATACAGTTGTTTGTGGTGAAGAAAAAGTCGAAACAGTTTTAAGATGAATATATGTAGCTTCAAAATAATTAAGCCAACTGTAGATGATATTCTACAAGA-----TAAGCTGTT-ACCTGAAACATATCTTGATGGGCCATTTCAGTTCCAGAACTAACATGCTGAGTGTTGTAAAC---AGCAGTTCTTGCCCAGTGGCAGATCTAAAAGCGCCTGTGTCCGTTG-----------------------GGAAGAAAAACAGTATTTAAAAGCCGTCTGAAATAAGCCACGTGGGAAA----ACAAGTCCACTG-----CCGCCGCTCCCACAGTCTCTCCACTC---TCCCTGCATCAGCCAGTGGCTCACACTGAGGACGCACAGGTGAAATCACGTT----GAGAATTCCCAGCAGAACC-GTAGTTTTCTCCCGGGCTGGTGTCTCCAATCAGCCCTGTGACTG-TTCCACGGTGGGC-GGGGGAAAGGGACTCGCTTCACAATGATTTCCATCTGGGTCAGGAGAGGAAGAATTGCCCCCGGCCAGCAAGTATCCGAGACCTGAAA---------AGTCCGC-GTGAGC-------------AAACAGACAAAAGCCTGCACTCGCCTTCCTTAAACTG-------------AGGGGAAATCCTGGAGAAACGCCTTGCTCACTCAGAAACAAACGAGAGAGATGGTCATGGCGGCCAAGTCTGCAGGTCACCTCTGTGGCCACTTCCCTCTGGATGAAGCCCTCAGCCGTGGTCTCCTCTTCACGAGATTACAAGGAAAGACAATTCAGATGGAAATCT--TTTTTACCCTGACTGTTGGAAATGCAGTGATAG-------TTACTGCAAGGATTGAAGGCAAAGGACT-GGAAACAGGCA-CTCAGCTCAGACCCTGCCTTCAGCCGGCGCCAGAATCCT-TCCTTG-----ACCCCAG--CCTCATCGTGAGACACCTGG-CC-CTTCACGTAGAAAGGGCTCCATCGATCAGC----------ACCTTGGCGGCCCACTACCCACCGTCCACCCGGTAGGAGTTCTGTGTT-------TTCCTTTTTC------TTCTTACTGAATAGGCTGAATTTTTGAGAAAGTTAATCTTTTG-----------TTGTCATACGCAAAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1328918 1179 - 108792865 TATGTAATAATGAAATGCCACAGAAAACTCAAGCAGAAGGAAGTTTGG-GTGGTATTTTCAC-CATCG------------------TAGGACGCAGCCTCAGCAGGTTTTCCTGTGCCTTGAACCTCAAAGCTCCTTGGGTGGTCCAAGCTC-CAGGCCCACATGTATTTCCACATTCACACTCACATACAGTTGCTTATGATGAAGCGAAAGTCCAAACGCTTTTAAGGTGAATGTGTGTAGCTTCAAAATACTTAAGCCAACTGTAGGTGGTATTCT--GAGA-----CAAGCTGTT-ACCTGAACTACATCTTCATGGGCCGTTTCAGTTTCAGAACTAGCATGCTGAGTCCTGTAAAC---AGCAGTTCTTACCCAGGGGCAGATCT--AAGTGTCTGCATCCGCTG-----------------------GGAAGAAGAACAGCGTTAGAAAGCCACCCGAAATAAGCCCCGTGTGAAG----ACAAGTCCTCTG-----CCGCTTTTCCCACAGTCTCT-TCCCC---TCCCTGCACCAGCCGGTGGGGCACACTGAGGACGCACAGGTGCAATACCATT----GGGAACTCACAGCAGAACC-GTGGTTTTCCCCTGGGCTGGCGTCTC--ATCAGTCCTGTGGCTG-ATTCACGGTGGGC---GGGGAGGGGACCTGCCTCACAATGATTTCCATCTGGGTCAGGAGAGGAAGAACTGCCCCCAGCCGGCAAGTATCCAAGACCTGGAA---------AGGCCCA-GTGAGC-------------AAACAGAC-AAAACTTGCCCTTGTCTTCCT-----TG-------------AGAGGAAATCCTGAAGAAACACCTTGGACACTTAGAAACAAGCCAGTGAGAGC--CAGGGTGGCCAAGCTGGCAT-GCACCTCTTTGGCCACGTCCCTCAGGACGAAG-GCTCAGCCAC-GTCTCCTCTGCATGAGATGATAAGGACAGTTAACTCACATGGAAAGAT--TTTATACCCAGACTGATGGAAATGTGATGATGG-------TTACCACCA-GATTTAAGGAAACGGGCC-GGAAACACGCA-CCCCGCTCAGACCCTGCCCTCAGCCCACGCCGGCATCCCATCCTTG-----ACCCCAG--CCTCACTGGGAGACACCTGGCCC-CTTCCCTCAGAAGTGGCTCTGTCAGTCAGC----------AGCCTGGAGG-CCACTACCCA-CATCTACCTGGTAAGATTTCTCTGTT-------TTCCTTTTTC-------TCTTACTGAACGGGCTGAATTTTTGACCAAGTCAATCTTTTGACCAAGTCAATTTGTCATACAG---- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1180536 1167 - 7082604 TATGTAATAATGAAATGTCACAGAAAACTCGAACAGAA-GAAGTTTGG-GTGGTATTTTCAC-CATCAGAGGAATGATTC-CCATCCAGGACGCAGCCTCAGCTGG-TTTCCTGTGCCTTCAACCTCAAAGCTCCGTGGGTATTCCAAGCTC-CAGGCCCACCTGTGTTTCCACGTTCACACTTAGGTACAATTGTTTATGATGAAGCGAAAGTCCAAACAGTTTTAAGGTGAATGTATGTAGCTTCAAAGTATTTAAGCCAACTGTGGATGGTATTCTAAGGGA-----TAAGCTGTTAACCTGAACGAAATCTTCATGGGCCATTTCAGTTTCAGAACTAACATGCTGAGTGCTGTAAAC---AGCAGTTCTTACCCAGTGACAGATCTAAAAGTGTCTGCACCCGCTG-----------------------GGAAGAGGAACAGTGTTTGAAAGCCACCCGAAATAAGCCTCCTGCG--G----ACAAGTCCGCTG-----CTGACTTTCCCACAGTCTCT-TCCTC---TCCCTGCCGCAGCCGGGGGTTCACACTGAGGACGCACAGGTGGAATAACGCC----GGGAATTCACAGCAGAGCC-GTGGTTTTCCCCTGGGCTGGCGTCTC--ATCAGTCCTGCGGCTG-AT------------------------------TCACAATGATTTCCATCTGGGTCAGGAGAGGAAGAACCGCCCCCGGCCAGCAAGTATCCAGGACCTGGAA---------AGGCCAA-GTGAGC-------------AAACAGAC-AAAACTTGCCCTTGTCTCCCT-----TG-------------AGAGGAAATCCTGGAGAGACACCTTGGACACTTAGAAAGCAGCCAGTGAGAGCGTCACGGTGGCCAAGCTGGCATGGCACCTCTTTGGCCACGTCCCTCAGGATGAAG-CCTCAGCCATGGTCTCCTCTGCATGAGATGATAAGGACAGATAATTCACATGGAAATAT--TTTATACCCAGACTGATGGAAATGCGATGATGG-------TTCCTGCCAGGATTTAAGGAAATGGGCT-GGAAACACACA-CCCCGCTCAGACCCTGCCCTCAGCCCGTGCCAGCACCCCGTCCTTG-----ACCCCAG--CCTCACCGGGAGATACCGGG-CC-CTTCCCTCAGAAGTGGCTCCATCAGTCAGC----------AGCCTGGAGG-CCACTACCCA-CGTCTACCTGGTAGGATTTCTGTGTT-------TTCCTTTTTC-------TCTTACTGAATGGGCTGAATTTTTGAACAAGTTTATCTTTTG-----------TTGTCATACACACAG i saiBol1.JH378218 C 0 M 542 s cebCap1.NW_016107827v1 1273026 1194 + 1864846 TATGTAATAACGAAATGTCCCAGAAAACTGAAACAGAAGGAAGTTTGG-GTGGTATTTTCAC-TACCGTAGGAATGATTC-CCATCCAGGATGCAGCCTCAGCGGGTTTTTCTGTGCCTTTAACCTCAAAGCTCCTTGGGTAGTCCAAGCTC-CAGGCCCACATGTATTCCCACATTCACACTTACATACAATTGTTTATGGTGAAGCGAAAGTCCAAACAGTTTCAAGGTGAATGTATGTAGCTTCAAAATATTTAAGCCAACTGTAGATGGTATTCTAAGAGA-----TAAGCTGTTAACCTGAACTAAATCTTCATGGGTCATTTCAGTTTCAGAACTAACATGCTGAGTGCTGTAAAC---AGCAGTTCTTACCCAGTGGCAGGTCTAACAGTGTCTGCATCCGTTG-----------------------GGAA---GAACAGTATTTGAAAGCCACCCGAAATAAGCCTCGTGTGAAG----ACAAGTCCACTG-----CTGCTTTACGCACAGCCTCT-CCCTC---TCCCTGCACCAGCCGGTGGTTCACCCTGAGGTCGCACAGGTGGAGTAACGTT----GCGAATTCACAGCAGAGCC-GTGGTTTTCTCCTGGGCTGGCGTCTC--ATCAGTCCTGTGGCTG-AGTCACGCTGGGC--GGGGGAAGGGACCTGCTTCACAATGATTTCCATCTGGGTCAGGAGGGGAAGAACTGCTGCCGGCCAGCAAGTACCGAAGGCCTGGAA---------AGGCTGA-GTGAGC-------------AAACAGAC-AAAACTTGGACTTGTCTTCCT-----TG-------------AGAGGAAATCCTGGAGAAACACCTCGGACACTTGGAAGCAAGCCAGTGAGAGCATCATGGTGGCCAAGCCGGCATGGCACCTCTTTGGCCACGTCCCTCAGGATGAAG-CCTCAGCCATGGTCTCCTCTGCATGAGATGATAAGGACAGATAATTCACATGGAAATAT--TTTATACCCAGACTAATGGAAATGCGATGATGG-------TTACCGCCAGGATTTAAGAAAATGGGCT-GGAAACATGCA-CCCCGCTCAGACCCTGCCCTCAGCCCATGCCAGCATCCCGTCCTTG-----A-CCCAG--CCTCACCAGGAGACACCTGG-CC-CTTCCCTCAGAAGTGGCTCTGTCAGTCA-C----------AGCCTGGAGG-CCACTACCCA-CGTCTACCTGGTAGGATTTCTGTGTT-------TTCCTTTTTC-------TCTTACTGAACAGGCTGAGTTTTTGACCAAGTTAATCTTTTG-----------TTGTCATACACACAG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 61713 1139 + 287728 TATGTAATAATGAAATGTCACAGAAAACTCAAACGGAAGGAAGTTCGG-GTGGTATTTTCAC-CGTCGCAGGAATGATTC-CCATCCAGGACGCAGCCTCAGCAGCGTTTCCTGTGCCTTTCACCTCAAAGCTCCTCGGGTAGTCCAAGCTC-CAGGCCCACGTGTATTTCCACATTCACACTTACATACAGTTGCTTATGATGAAGCAAAAGTCCAAACAGTTTTACGGTGAATGTATGTA--------------------------GATGGTATTCTAAAAGA-----TAAGCTGTT-ACCTGAACTAAATCTTCTTGGGCCATTTCAGTTTCAGAACTGACATGCTGAGTGCTGTGAAC---AGCAGGCCTTACCCAGTGGCAGATCTGAAAGTGTCTGCACCCGCTG-----------------------GGAAGAGGAACAGTATTTGAAAGCCACCCGGAGCAAGCCTCGCGTGGGG----ACAAGGCCACCG-----CTGCTTTTCCCGCAGTCTCTCCCCTC---TCCCTGCACCAGCCCGGGCTTCACACTGACGACCCGCAGCTGGAATCACACC----GGGACTTCACAGCAGAGCC-GTAGTTTCGTCCTGGGCTGGCGTCTC--ATCAGTCCTCTGGCTG-ATTCACGGTGGGC---GGGGAAGGGACCT-CTTCACAGTGATTTCCACCTGGGTCAGGAGAGGAAGCAGTGCCCCCGGCCAGCGAGTATCCAGGACCTGGGA---------AGGCCGA-GCGAGC-------------AGACAGAC-AATACTTGCACTTGTCTTCCT-----TG-------------AGAGGAAGTCCCGGAGAAACACCGTGGACGCTTAGAAACAAGCCAGTGAGAGCGTCACGG-------------------------TGGCCACATCCCTCAGGATGAAG-CCTCAGCCACGTCCTCCTCTGCATGAGATGATAAGGACAGATAATTCACATGGAAATAT--TTTATACCCAGACTGATGGAAATGCGATGACGG-------TTACCGCCAGGATTTAAGAACATGGGCT-GGAAACA--------CGCTCGGACCCTGCCCTCAGCCCATGCCAGCATCCCGTCCTCG-----ACCCCGG--GCTCGCCGGGAGACACCTGG-CC-CTTCCCTCAGACGTGGCTCTGTCAGTCAGC----------AGCCTGGAGG-CCACTACCCA-CGTCTACCTGGTAGGATTTCAGTGTT-------TTCCTTTTTC-------TCTTACTGAACGGGCTGAATTTTTGACCAAGTTCATCGTTTG-----------TTGTCATACACGCGG i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1614320 1241 + 4416731 TATGTAACCATTATCTATGGAAGAAAGTTCAGTCTCAAAAGAGTTTGGAATGGTGTGTGCACAAAACGTACGAATTGTTTCCAGTCAAGTGTAAATCTTCACTGTCTTTTCTCATGACATTAATTTCAAAGGTTTTTTGAGAATGTAAGTTTGTAGGCCCAAATATATTACAATATATGCACTGACATACAAT---TTGTAATAGTGAAAAATCCCAAACAAGTGTA-------------------CAGAACACCCAGGCAAAATATAAATGATCTTCTAAAAGATAAAGTAAGCCGTT-TCCTAAAATATGGCTGTATTATTCATTTCCAATTCAGAATTAATATGCTGAGTGATATGAACGAGAACAATTTTAACACAATGAGAAACATAAAAA----TGTGTCAGTTGTAGAACCCTTTTGTCCTCGTGAAAAAAAAAAAAAAGTCTTTGAAAAT-GTTTTAAATATGCCAAAAGTAAAAAGAGAAAAATCCATTTGTCATTTGTCCTTTCTATTCTTTTTCTCCCCCATTCCTTGTA--GGTCAGTTGTTTCTATTTAGGATGCTCAGGTAGAACGACATTTGAGGAAAAGTAAAACCAGAATCAGCAGTTTTCATCC---TTCGTGTTTCAGAGTAACTC-GTGATTTATTCCATG-TGAGG-AAAAGGATGAAACCAGGTGCAGTGTGATTTCTATCTGGATCATGAGAGAAAT-ATTTTCCTCAATCAACAAATAGTCTAGAAGTAGGG---------ATACAGCAGTAAATAACAACAACAACAAAAAAGACAAAAACATTGATCTTTCTTTCTGTGCTTGTGCAGCAATTATAATAGGAAATACTGAAGATGTACCTTGAACACTCAGAA-----------------------------------------AGTTTTTGGGCAAACTATTTCAGAATAACGACTTAAGCCACTGTTTCCTCTTCATAACGTTATGA----AGACAATTTGCCCTGAAATTTTCTTTATACCCCAACGATTGGAAATATAGTCATCGTTTGTCATTTTTTCAAGGATTTGAGGTAAAGAAGTGGGAAATGTGCATTCCAGTTCAG----TGGCTTTATCAAGTGATGTGCTCAG-CTGTTGTGATTGCCTAAGCACATGACACTGAACCATCTGG-CTACTTCAATCA---ATAGTTCAATCAATCAGCCAGTAATGCTATCTATGTGA--TACTACAGAGTG---GGCTTGAATATTTTTTGTTTTTGTTCTATTCCTTTTTGGTTTTGTTTTAACTGTACTGGTTGAATTTTTGAGTGAGTTGATCTTTTG-----------CTGTTATGCAGACAA i dasNov3.JH576208 I 599 C 0 e mm10.chr12 89956681 3538 - 120129022 I e otoGar3.GL873658 910920 20 + 5252280 I a score=1713791.000000 s hg38.chr2_KI270774v1_alt 57681 211 + 223625 GGATAATGAGTTTCCCAGCTGTGTTACAAACTT----------AATAAGTCATAGAAACCGTGGTCACTGTGTTTAATTTCTTCTTTCCAGG----ACAAGCATGTGTTTGCCCCTTTCGGGTTCTAAGTTTTAACTGACAAAATTTGAAACCATTTCTGCAAAAATGTTAATGAGGATTTATTTGAAAA---GAACATCACACCAGAAAACATGAGCCCTGTAATTT s panTro5.chr2A 1334965 211 + 111504155 GGATAATGAGTTTCCCAGCTGTGTTACAAACTT----------CATAAGTCATAGAAACCATGGTCACTGTGTTTAATTTCTTCTTTCTAGG----ACAAGCATGTGTTTGCCCCTTTCGGGTTCTAAGTTTTAACTGACAAAATTTGAAAACATTTCTGCAAAAATGTTAATGAGGATTTATTTGAAAA---GAACATCACACCAGAAAACATGAGCCCTGTAATTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1295424 211 + 114371477 GGATAATGAGTTTCCCAGCTGTGTTACAAACTT----------CATAAGTCATAGAAACCATGGTCACTGTGTTTAATTTCTTCTTTCTAGG----ACAAGCGTGTGTTTGCCCCTTTCGGGTTCTAAGTTTTAACTGACAAAATTTGAAAACATTTCTGCAAAAATGTTAATGAGGATTTATTTGAAAA---GAACATCACACCAGAAAACATGAGCCCTGTAATTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1320296 211 + 1464242 GGATAATGAGTTTCTCAGCTGTGTTACAAACTT----------AATAAGTCATAGAAACCATGGTCATTGTGTTTAATTTCTTCTTTCTAGG----ACAAGCATGTGTTTGCCCCTTTCGGGTTCTAAGTTTTAACTGACAAAATTTGAAAACATTTCTGCAAAAATGTTAATGAGGATTTATTTGAAAA---GAACATCACACCAGAAAACATGAGCCCTGTAATTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1052030 209 + 81552678 GGATAGTGAGTTTCCCAACTGTGTTACAAACTT----------AATAAGTCATAGAAACCATGGTCGCTGTGTTTAATTTCTTCTTTCTAGG----ACAAGCA--CGTTTGCCCCTTTCAGGTTCTAAGTTTTAACTGACAAAGTTTGAAAACATTTCTGCAAAAATGTTGATGAGGATTTATTTGAAAA---GAACATCACACCAGAAAACATGAACCCTGTAATTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1380654 200 + 108979918 -----------TTCCCAAGTGTGTTACAAACTT----------AATAAGTCGCAGAAACCATGGTCGCCGTGTTTAATTTCTTCTTTCTAGG----ACAAGCATGCGTTTGCCCCTTTCAGGTTCTAAGTTTTAACTGACAAAATTTGAAAACATTTCTGCAAAAATGTTGATGAGGATTTATTTGAAAA---GAACATCATACCAGAAAACATGAGCCCTGTAATTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1352920 200 - 111193037 -----------TTCCCAAGTGTGTTACAAACTT----------AATAAGTCGTAGAAACCATGGTCGCCGTGTTTAATTTCTTCTTTCTAGG----ACAAGCATGCGTTTGCCCCTTTCAGGTTCTAAGTTTTAACTGACAAAATTTGAAAACATTTCTGCAAAAATGTTGATGAGGATTTATTTGAAAA---GAACATCATACCAGAAAACATGAGCCCTGTAATTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1381159 200 + 3644372 -----------TTCCCAAGTGTGTTACAAACTT----------AATAAGTCGTAGAAACCATGGTCGCCGTGTTTAATTTCTTCTTTCTAGG----ACAAGCATGCGTTTGCCCCTTTCAGGTTCTAAGTTTTAACTGACAAAATTTGAAAACATTTCTGCAAAAATGTTGATGAGGATTTATTTGAAAA---GAACATCATACCAGAAAACATGAGCCCTGTAATTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1334855 200 - 10304083 -----------TTCCCAAGTGTGTTACAAACTT----------AATAAGTCGTAGAAACCATGGTCGCCGTGTTTAATTTCTTCTTTCTAGG----ACAAGCATGCGTTTGCCCCTTTCAGGTTCTAAGTTTTAACTGACAAAATTTGAAAACATTTCTGCAAAAATGTTGATGAGGATTTATTTGAAAA---GAACATCATACCAGAAAACATGAGCCCTGTAATTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1406252 211 - 107702431 GGATAATGAGTTTCCCAACTGTGTTACAAACTT----------AATAAGTCATAGAAACCATGGTCGCCATGTTTAATTTCTTCTTTCTAGG----ACAAGCATGTATTTGTCCCTTTCAGGTTCTAAGTTTTAACCAACAGAATTTGAAAACATTTCTGCAAAAATGTTGATGAGGATTTATTTGAAAA---GAACATCATACCAGAAAACATGAGCCCTGTAATTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 883540 200 - 2200435 -----------TTCCCAAGTGTGTTACAAACTT----------AATAAGTCGTAGAAACGATGGTCGCCGTGGTTAATTTCTTCTTTCTAGG----ACAAGCATGCGTTTGCCCCTTTCAGGTTCTAAGTTTTAACTGACAAAATTTGAAAACATTTCTGCAAAAATGTTGATGAGGATTTATTTGAAAA---GAACATCATACCAGAAAACATGAGCCCTGTAATTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1321680 208 - 13651311 GGATGAGT---TTTCCAACTGTGTTACAAACTT----------AGTAAGTCATAGAAACCATGGTCGCCGTGTTTAATTTCTTCTTTCTAGG----ACAAGCATGTGTTGGTCCCCTTCAGGTTCTAAGTTTTGACCAACAGAATTTGAAAACATTTCTGCAAAAATGTTGATGAGGATTTATTTGAAAA---GAACATCATACCAGAAAACATGAACCCTGTAATTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1330097 205 - 108792865 GGATAATGAGGTTTCCGATTGTGTTACAAGCTG----------ACGAAGTCAGAGAAACCGTGATCTCTGTGTTTAATTTCCTCTTGGAAGGAAGCACAGGCGTGTGTCGACCCCTTTCAG-TTCTAAGTTCTCACTGACGGAATTTGAAAACATTTCCGCAAAAATATTGATGAG---------GAAAA---GAACATCACACCAGAAACCACGAGCCCTGTAATTT i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1274220 202 + 1864846 GGATAATGAGTTTTTCGATTGTGTTATAAACTT----------AGGAAGTCAGAGAAACCATGATGTCTGTGTTTAATTTCCTCTTGGAAGG----ACAGCTGTGTGTTTACCCCTTTCAGCTTCTAAGTTTTCACTGACAGAATTTGAAAACATTTCTGCAAAAATATTGATGAG---------GAAAA---GAACATCACACCAGAAACCATGAGCCCTGTAATTT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 62852 189 + 287728 GGATAATGAGTTTTCCGATTGTCTTATAAACTT----------AGGAAGTCAGAGAAACCGTGATCTCTGTGTTTAATTTCCTCTTGGAAGG----ACGGCCGTGTGTTTACCCCTTTCGGGCTCTAAGTTTTCACTGAC--AATTTGAAAACATTTC-----------TGATGAG---------GAAAA---GAACATCACACCAGAAACCATGAGCCCTGTAATTT i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1615561 215 + 4416731 AGATGATTAATTTTTCAACTGTGTTACAAACTTGTTAACCCAAAATATATCAAGAAAACAATTTTCGCCGTGCTTAGTTTTGCCTCTCTTGC----AATACCATATGTTTGCCCCTTTAAGATTCTAAGTTTTAACTGAGAAAAATTGAAAACATTTAAGCTAATATCTTAACCA---------TCAAAACTTAGACATTGAATCTAAAAAGGTGAGCTCTCTAATTG i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1181703 542 - 7082604 M e otoGar3.GL873658 910920 20 + 5252280 I a score=26957.000000 s hg38.chr2_KI270774v1_alt 57892 3 + 223625 ATA s panTro5.chr2A 1335176 3 + 111504155 ATA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1295635 3 + 114371477 ATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1320507 3 + 1464242 ATA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1052239 3 + 81552678 ATA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1380854 3 + 108979918 ATA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1353120 3 - 111193037 ATA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1381359 3 + 3644372 ATA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1335055 3 - 10304083 ATA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1406463 3 - 107702431 ATA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 883740 3 - 2200435 ATA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1321888 3 - 13651311 ATA i colAng1.NW_012118821v1 C 0 C 0 s cebCap1.NW_016107827v1 1274422 3 + 1864846 ATA i cebCap1.NW_016107827v1 C 0 I 5 s aotNan1.NW_018513311v1 63041 3 + 287728 ATA i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1615776 3 + 4416731 GTA i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1181703 542 - 7082604 M e otoGar3.GL873658 910920 20 + 5252280 I e calJac3.chr14 1330302 0 - 108792865 C a score=4614.000000 s hg38.chr2_KI270774v1_alt 57895 1 + 223625 G s panTro5.chr2A 1335179 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1295638 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1320510 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1052242 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1380857 1 + 108979918 G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1353123 1 - 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1381362 1 + 3644372 G i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1335058 1 - 10304083 G i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1406466 1 - 107702431 G i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 883743 1 - 2200435 G i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1321891 1 - 13651311 G i colAng1.NW_012118821v1 C 0 C 0 s aotNan1.NW_018513311v1 63044 1 + 287728 A i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1615779 1 + 4416731 G i dasNov3.JH576208 C 0 I 3 e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1181703 542 - 7082604 M e cebCap1.NW_016107827v1 1274425 5 + 1864846 I e otoGar3.GL873658 910920 20 + 5252280 I e calJac3.chr14 1330302 0 - 108792865 C a score=78622.000000 s hg38.chr2_KI270774v1_alt 57896 12 + 223625 AGAAATCTTTTC s panTro5.chr2A 1335180 12 + 111504155 AGAAATCttttc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1295639 12 + 114371477 AGAAATCttttc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1320511 12 + 1464242 AGAAATCTtttc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1052243 12 + 81552678 AGAAAtctttcc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1380858 12 + 108979918 AGAAACCttttc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1353124 12 - 111193037 AGAAACCttttc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1381363 12 + 3644372 AGAAACCttttc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1335059 12 - 10304083 AGAAACCttttc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1406467 12 - 107702431 AGAAACCttttc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 883744 12 - 2200435 AGAAACCttttc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1321892 12 - 13651311 AGAAACCttttc i colAng1.NW_012118821v1 C 0 C 0 s aotNan1.NW_018513311v1 63045 12 + 287728 ATAAACCTTTTC i aotNan1.NW_018513311v1 C 0 I 76 e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1181703 542 - 7082604 M e cebCap1.NW_016107827v1 1274425 5 + 1864846 I e otoGar3.GL873658 910920 20 + 5252280 I e dasNov3.JH576208 1615780 3 + 4416731 I e calJac3.chr14 1330302 0 - 108792865 C a score=12613.000000 s hg38.chr2_KI270774v1_alt 57908 13 + 223625 tttctttctttct s panTro5.chr2A 1335192 12 + 111504155 tttctttctttc- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1295651 12 + 114371477 tttctttctttc- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1320523 12 + 1464242 tttctttctttt- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1052255 12 + 81552678 ttccttcctccc- i nomLeu3.chr19 C 0 M 2520 s rheMac8.chr13 1380870 8 + 108979918 ttttttct----- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1353136 8 - 111193037 ttttttct----- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1381375 8 + 3644372 ttttttct----- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1335071 8 - 10304083 ttttttct----- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1406479 8 - 107702431 tttttacc----- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 883756 8 - 2200435 ttttttct----- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1321904 8 - 13651311 tttttacc----- i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 63057 76 + 287728 I e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1181703 542 - 7082604 M e cebCap1.NW_016107827v1 1274425 5 + 1864846 I e otoGar3.GL873658 910920 20 + 5252280 I e dasNov3.JH576208 1615780 3 + 4416731 I e calJac3.chr14 1330302 0 - 108792865 C a score=97209.000000 s hg38.chr2_KI270774v1_alt 57921 36 + 223625 ttttttttttttttt---------tactgagatgacgtcttgctc s panTro5.chr2A 1335204 28 + 111504155 --------ttttttt---------tattgagatgacatcttgctc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1295663 26 + 114371477 ----------ttttt---------tattgagatgacgtcttgctc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1320535 31 + 1464242 -----tttttttttt---------tattgagatgacgtcttgctc i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1380878 27 + 108979918 ---------tttttt---------aattgagatgaagtcttgctc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1353144 27 - 111193037 ---------tttttt---------aattgagatgaagtcttgctc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1381383 27 + 3644372 ---------tttttt---------aattgacatgaagtcttgctc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1335079 27 - 10304083 ---------tttttt---------aattgagatgaagtcttgctc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1406487 31 - 107702431 ---------tttttt-----ttaaaattgagatgaagtcttgctc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 883764 27 - 2200435 ---------tttttt---------aattgagatgaagtcttgctc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1321912 36 - 13651311 ---------tttttttttttttttaattgagatgaagtcttgctc i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 63057 76 + 287728 I e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1181703 542 - 7082604 M e cebCap1.NW_016107827v1 1274425 5 + 1864846 I e otoGar3.GL873658 910920 20 + 5252280 I e dasNov3.JH576208 1615780 3 + 4416731 I e calJac3.chr14 1330302 0 - 108792865 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=288685.000000 s hg38.chr2_KI270774v1_alt 57957 51 + 223625 tgtcacccaggctggagtgcaatggctcgatctcggcccactgtaccctcc s panTro5.chr2A 1335232 51 + 111504155 tgtcacccaggctggagtgcaatggctcgatctcggcccactgtaccctcc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1295689 51 + 114371477 tgtcacccaggctggagtgcaatggctcgatctcggcccactgtaccctcc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1320566 51 + 1464242 tgtcacccaggctggagtgcaatgactcgatctcggcccactgtaccctcc i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1380905 51 + 108979918 tgtcacccaggctggagtgcagtggctcaatctcggctcactgcaccctcc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1353171 51 - 111193037 tgtcacccaggctggagtgcagtggctcaatctcggctcagtgcaccctcc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1381410 51 + 3644372 tgtcacccaggctggagtgcagtggctcaatctcggctcactgcaccctcc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1335106 51 - 10304083 tgtcacccaggctggagtgcaatggctcaatctcggctcactgcaccctcc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1406518 51 - 107702431 tgtcacccaggctggagtacagtggctcaatctcggctcactgcatcctct i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 883791 51 - 2200435 tgtcacccaggctggagtgcaatggctcaatctcggctcactgcaccctcc i manLeu1.NW_012103754v1 C 0 I 37 s colAng1.NW_012118821v1 1321948 51 - 13651311 tgtcacccagactggagtgcagtggctcaatctcggctcactgcaccctct i colAng1.NW_012118821v1 C 0 C 0 s aotNan1.NW_018513311v1 63133 51 + 287728 tgttacccaggctagagtgcaatggcgcgatctcggctcaccgcaacctcc i aotNan1.NW_018513311v1 I 76 C 0 e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1181703 542 - 7082604 M e cebCap1.NW_016107827v1 1274425 5 + 1864846 I e otoGar3.GL873658 910920 20 + 5252280 I e dasNov3.JH576208 1615780 3 + 4416731 I e calJac3.chr14 1330302 0 - 108792865 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=38710.000000 s hg38.chr2_KI270774v1_alt 58008 8 + 223625 gcctcctg- s panTro5.chr2A 1335283 8 + 111504155 gcctcctg- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1295740 8 + 114371477 gcctcctg- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1320617 8 + 1464242 gcctcctg- i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1380956 8 + 108979918 gcctcctg- i rheMac8.chr13 C 0 I 1 s macFas5.chr13 1353222 8 - 111193037 gcctcctg- i macFas5.chr13 C 0 I 1 s macNem1.NW_012011978v1 1381461 8 + 3644372 gcctcctg- i macNem1.NW_012011978v1 C 0 I 1 s cerAty1.NW_012000820v1 1335157 8 - 10304083 gcctcctg- i cerAty1.NW_012000820v1 C 0 I 1 s chlSab2.chr14 1406569 8 - 107702431 gcctcctg- i chlSab2.chr14 C 0 I 273 s colAng1.NW_012118821v1 1321999 8 - 13651311 gcctcctg- i colAng1.NW_012118821v1 C 0 I 1 s aotNan1.NW_018513311v1 63184 9 + 287728 gcctcctgg i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1181703 542 - 7082604 M e cebCap1.NW_016107827v1 1274425 5 + 1864846 I e otoGar3.GL873658 910920 20 + 5252280 I e dasNov3.JH576208 1615780 3 + 4416731 I e calJac3.chr14 1330302 0 - 108792865 C e manLeu1.NW_012103754v1 883842 37 - 2200435 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=15510.000000 s hg38.chr2_KI270774v1_alt 58016 3 + 223625 gtt s panTro5.chr2A 1335291 3 + 111504155 gtt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1295748 3 + 114371477 gtt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1320625 3 + 1464242 gtt i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1380965 3 + 108979918 gtt i rheMac8.chr13 I 1 C 0 s macFas5.chr13 1353231 3 - 111193037 gtt i macFas5.chr13 I 1 C 0 s macNem1.NW_012011978v1 1381470 3 + 3644372 gtt i macNem1.NW_012011978v1 I 1 C 0 s cerAty1.NW_012000820v1 1335166 3 - 10304083 gtt i cerAty1.NW_012000820v1 I 1 C 0 s chlSab2.chr14 1406850 3 - 107702431 gtt i chlSab2.chr14 I 273 C 0 s colAng1.NW_012118821v1 1322008 3 - 13651311 gtt i colAng1.NW_012118821v1 I 1 C 0 s aotNan1.NW_018513311v1 63193 3 + 287728 gtt i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1181703 542 - 7082604 M e cebCap1.NW_016107827v1 1274425 5 + 1864846 I e otoGar3.GL873658 910920 20 + 5252280 I e dasNov3.JH576208 1615780 3 + 4416731 I e calJac3.chr14 1330302 0 - 108792865 C e manLeu1.NW_012103754v1 883842 37 - 2200435 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=1027333.000000 s hg38.chr2_KI270774v1_alt 58019 201 + 223625 caggcgattctcctgcctcaacctcccaagtagctgggactacaggcacccg--ccaccacgcccagctaaa--ttttttttgtatttttagtagagacggggtttcactgtgttagccaggatggtctcgatctcctgaactcgtcatctacccaccttggcctcccaaagtgttgggattacaggcatgaaccactgcacccg s panTro5.chr2A 1335294 201 + 111504155 caagcggttctcctgcctcaacctcccaagtaactgggactacaggcacccg--ccaccacgcccagctaaa--ttttttttgtatttttagtagagacggggtttcactgtgttagccaggatggtctcgatctcctgaactcgtgatctacccaccttggcctcccaaagtgctgggattacaggtgtgaaccactgcacccg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1295751 201 + 114371477 caagcgattctcctgcctcaacctcccaagtaactgggcctacaggcacccg--ccaccacgcccagctaaa--ttttttttgtatttttagtagagacggggtttcactgtgttagccaggatggtctcgatctcctgaactcatgatctacccaccttggcctcccaaagtgctgggattacaggtgtgaaccactgcacctg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1320628 201 + 1464242 caagcgattctcctgccttaacctcccaagtagctgggactacaggcacccg--ccaccacgcccagctaaa--ttttttttgtatttttagtagagacggggtttcactgtgttagccaggatggtctcgatctcctgacctcatgatctacccaccttggcctcccaaagtgctgggattacaggtgtgagccactgcacccg i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1380968 198 + 108979918 catgc---cattctgcctcagcttcccaagtagctgggactacagacacctg--ccaccgcgcccagctaaa--ttttttttgtagttttagtagagatggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatctgcccacctcggcctcctaaagtgctgggtttacaggcgtgagccaccgccccca i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1353234 198 - 111193037 catgc---cattctgcctcagcttcccaagtagctgggactacagacacccg--ccaccgcgcccagctaaa--ttttttttgtagttttagtagagatggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatctgcccacctcggcctcctaaagtgctgggtttacaggcgtgagccaccgccccca i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1381473 198 + 3644372 catgc---cattctgcctcagcttcccaagtagctgggactacagacacccg--ccaccgcgcccagctaaa--ttttttttgtagttttagtagagatggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatctgcccacctcggcctcctaaagtgctgggtttacaggcgtgagccaccgccccca i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1335169 198 - 10304083 catgc---cattctgcctcagcttcccaagtagctgggactacagacacccg--ccaccgcgcgcagctaaa--ttttttttgtagttttagtagagatggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatctgcccacctcggcctcctaaagtgctgggtttacaggcgtgagccaccaccccca i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1406853 198 - 107702431 catgc---cattctgcctcagcttcccaagtagctgggactacagacaccca--ccaccgtgcccagctaaa--ttttttttgtagttttagtagagatggggtttcaccgtgttagccaggatgatctcaatctcctgacctcgtgatctgcccacctcggcctcctaaagtgctgggtttacaggcatgagccaccgccccca i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 883879 197 - 2200435 caagcaatcctcctgcctcagcctcctgagtagctgggattacaggcatcca--ccaccacgcccagctaa------cttttgtagttttagtagagatggggtttcatcttgttagccaggatggtctcgatctcttgacctcgtgatctgcccacctcggcctcctaaagtgctgggtttacaggcgtgagccaccgccccca i manLeu1.NW_012103754v1 I 37 C 0 s colAng1.NW_012118821v1 1322011 200 - 13651311 catgc---cattctgcctcagcttcccaagtagctgggactacagacacccg--ccaccgcgcccagctaaattttttttttgtagttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtaatccgcccacctcggcctcctaaagtgctgagtttacaggcatgagccaccaccccca i colAng1.NW_012118821v1 C 0 C 0 s aotNan1.NW_018513311v1 63196 199 + 287728 caggccaatctcctgcctcagc-tctcgagtagctgggattacaggcacgcgcaccaccatgcccagctaat-----tttttgtatttttagtagagacggggtttcaccatgttgaccgggatggtctcgatctcttgacctcgtgatccacccgccttggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccg i aotNan1.NW_018513311v1 C 0 I 12 e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1181703 542 - 7082604 M e cebCap1.NW_016107827v1 1274425 5 + 1864846 I e otoGar3.GL873658 910920 20 + 5252280 I e dasNov3.JH576208 1615780 3 + 4416731 I e calJac3.chr14 1330302 0 - 108792865 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=12778.000000 s hg38.chr2_KI270774v1_alt 58220 3 + 223625 acc s panTro5.chr2A 1335495 3 + 111504155 acc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1295952 3 + 114371477 acc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1320829 3 + 1464242 acc i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1381166 3 + 108979918 gcc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1353432 3 - 111193037 gcc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1381671 3 + 3644372 gcc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1335367 3 - 10304083 gcc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1407051 3 - 107702431 gcc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 884076 3 - 2200435 gcc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1322211 3 - 13651311 gcc i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 63395 12 + 287728 I e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1181703 542 - 7082604 M e cebCap1.NW_016107827v1 1274425 5 + 1864846 I e otoGar3.GL873658 910920 20 + 5252280 I e dasNov3.JH576208 1615780 3 + 4416731 I e calJac3.chr14 1330302 0 - 108792865 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=41195.000000 s hg38.chr2_KI270774v1_alt 58223 7 + 223625 ATAGATA s panTro5.chr2A 1335498 7 + 111504155 ATAGATA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1295955 7 + 114371477 ATAGATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1320832 7 + 1464242 ATAGATA i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1381169 7 + 108979918 ATAGATA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1353435 7 - 111193037 ATAGATA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1381674 7 + 3644372 ATAGATA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1335370 7 - 10304083 ATAGATA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1407054 7 - 107702431 ATAGATA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 884079 7 - 2200435 ATAGATA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1322214 7 - 13651311 ATAGATA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1330302 7 - 108792865 ATAAATA i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 63395 12 + 287728 I e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1181703 542 - 7082604 M e cebCap1.NW_016107827v1 1274425 5 + 1864846 I e otoGar3.GL873658 910920 20 + 5252280 I e dasNov3.JH576208 1615780 3 + 4416731 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=-1462.000000 s hg38.chr2_KI270774v1_alt 58230 1 + 223625 T s panTro5.chr2A 1335505 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1295962 1 + 114371477 T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1320839 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1381176 1 + 108979918 A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1353442 1 - 111193037 A i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1381681 1 + 3644372 A i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1335377 1 - 10304083 A i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1407061 1 - 107702431 A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 884086 1 - 2200435 A i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1322221 1 - 13651311 A i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1330309 1 - 108792865 A i calJac3.chr14 C 0 C 0 s dasNov3.JH576208 1615783 1 + 4416731 T i dasNov3.JH576208 I 3 C 0 e aotNan1.NW_018513311v1 63395 12 + 287728 I e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1181703 542 - 7082604 M e cebCap1.NW_016107827v1 1274425 5 + 1864846 I e otoGar3.GL873658 910920 20 + 5252280 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=337772.000000 s hg38.chr2_KI270774v1_alt 58231 54 + 223625 ACCTTTTCAACAGATATTTAAGAAT---AGAAA---AACTGAAAATGTTGATTAAAGAGT---- s panTro5.chr2A 1335506 54 + 111504155 ACCTTTTCAACAGATATTTAAGAAT---AGAAA---AACTGAAAATGTTGATTAAAGAGT---- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1295963 54 + 114371477 ACGTTTTCAACAGATATTTAAGAAT---AGAAA---AACTGAAAATGTTGATTAAAGAGT---- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1320840 54 + 1464242 ACCTTTTCAACAGATATTTAAGAAT---AGAAA---AACTGAAAATGTTGATTAAAGAGT---- i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1381177 54 + 108979918 ACCTTTTCAACAGATATTTAAGAAT---AAAAA---AACTGAAAATGTTGATTAAAGAGT---- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1353443 54 - 111193037 ACCTTTTCAACAGATATTTAAGAAT---AAAAA---AACTGAAAATGTTGATTAAAGAGT---- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1381682 54 + 3644372 ACCTTTTCAACAGATATTTAAGAAT---AAAAA---TACTGAAAATGTTGATTAAAGAGT---- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1335378 54 - 10304083 ACCTTTTCAACAGATATTTAAGAAT---AAAAA---AACTGAAAATGTTGATTAAAGAGT---- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1407062 54 - 107702431 ACCTTTTCAACAGATATTTAAGAAT---AAAAA---AACTGAAAATGTTGATTAAAGAGT---- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 884087 54 - 2200435 ACCTTTTCAACAGATATTTAAGAAT---AAAAA---AACTGAAAATGTTGATTAAAGAGT---- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1322222 57 - 13651311 ACCTTTTCAACAGATATCTAAGAATTAAAAAAA---AACTGAAAATGTTGATTAAAGAGT---- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1330310 55 - 108792865 ACCTTTTCAACAGATGCTTAAGAAT-AAAAAAA---TGCTGTAAATGttaatttaaaac----- i calJac3.chr14 C 0 I 1 s cebCap1.NW_016107827v1 1274430 54 + 1864846 ACCTTTACAACAGATATTTAAGAAT--TAAAAA---CACTGTAAATGTTAATTTAAAAC----- i cebCap1.NW_016107827v1 I 5 I 1 s dasNov3.JH576208 1615784 64 + 4416731 ACTTTTTAAATAGATATTTAAGAATTTTAAAGATTCAAACAAAATTGCTGATTAGTGATAGCTT i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 63395 12 + 287728 I e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1181703 542 - 7082604 M e otoGar3.GL873658 910920 20 + 5252280 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=1499731.000000 s hg38.chr2_KI270774v1_alt 58285 223 + 223625 TTTTAAT-TTTTTTTT----AAGTTTTTAAAATTTAAAAAGGGAAAAAAAG----CATGAAGAAAATTGC-ATTAAATTACTTTGACCACGCATTGCTTAGGGCTGAAAAATCATATTGGTTAGGCAGACGATAGGAGAGATGGG---CTCGACTCAGACCTACACTGGCATAGGAAACTGGTGAACTGGGAAACTCACCTTGGTCGTGA-AAGGGAGGATTTATTTTGGTTTACAG s panTro5.chr2A 1335560 223 + 111504155 TTTAAAT-TTTTTTTT----TAGTTTTTAAATTTTAAAAAGGGAAAAAAAG----CATGAAGAAAATTGC-ATTAAATTACTTTGACCACGCATTGCTTAGGGCTGAAAAATCATGTTGGCTAGGCAGACGATAGGAGAGATGGG---CTCGACTCAGACCTACACTGGCATAGGAAACTGGTGAACTAGGAAACTCACCTTGGTCGTGA-AAGGGAGGATTTATTTTGGTTTACAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1296017 222 + 114371477 TTTAAAT-TTTTTTTT-----AGTTTTTAAATTTTAAAAAGGGAAAAAAAG----CATGAAGAAAATTGC-ATTAAATTACTTTGACCACGCATTGCTTAGGGCTGAAAAATCATGTTGGCTAGGCAGACGATAGGAGAGATGGG---CTCGACTCAGACCTACACTGGCATAGGAAACTGGTGAACTAGGAAACTCACCTTGGTCGTGA-AAGGGAGGATTTATTTTGGTTTACAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1320894 222 + 1464242 TTTTAAT-TTTTTTTT-----AGTTTTTAAATTTTAAAAAGGGAAAAAAAG----CGTGAAGAAGATTGC-ATTAAATTACTTCGACCACGCATTGCTTAGGGCTGAAAAATCATGTTGGCTAGGCAGACGATAGGAGAGATGGG---CTCGACTCAGACCTACACTGGCATAGGAAACTGGTGAACTAGGAAACTCACCTTGGTCGTGA-AAGGGAGGATTTATTTTGGTTTACAG i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1381231 226 + 108979918 TTTTAAA-TTTTTTTT-----AGTTTTTAAATTTTAAAAAGGGAAAAAAAATCATCATGAAGAAAATTGC-ATTAAATTACTTTGACCACACATTGCTTAGGGCTGAAAAATAATGTCAGCTAGACAGACAACAAGAGAGATGGG---GTCGACTCAGACCTACACTGGCATAGGAAACTAGTGAACTAGGACACTCACCTTGGTCGTGA-AAGGGAGGATTTATTTTGGTTCACAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1353497 226 - 111193037 TTTTAAA-TTTTTTTT-----AGTTTTTAAATTTTAAAAAGGGAAAAAAAATCATCATGAAGAAAATTGC-ATTAAATTACTTTGACCACACATTGCTTAGGGCTGAAAAATAATGTCAGCTAGACAGACAACAAGAGAGATGGG---GTCGACTCAGACCTACACTGGCATAGGAAACTAGTGAACTAGGACACTCACCTTGGTCGTGA-AAGGGAGGATTTATTTTGGTTCACAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1381736 227 + 3644372 TTTTAAATTTTTTTTT-----AGTTTTTAAATTTTAAAAAGGGAAAAAAAATCATCATGAAGAAAATTGC-ATTAAATTACTTTGACCACACATTGCTTAGGGCTGAAAAATAATGTCAGCTAGACAGACAACAGGAGAGATGGG---GTCGACTCAGACCTACACTGGCATAGGAAACTAGTGAACTAGGACACTCACCTTGGTCGTGA-AAGGGAGGATTTATTTTGGTTCACAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1335432 226 - 10304083 TTTAAAA-TTTTTTTT-----AGTTTTTAAATTTTAAAAAGGGAAAAAAAATCATCATGAAGAAAATTGC-ATTAAATTACTTTGACCACACATTGCTTAGGGCTGAAAAATCATGTCAGCTAGACAGACAACAGGAGAGATGGG---GTCGACTCAGACGTACACTGGCATAGGAAACTGGTGAACTAGGAAACTCACCTTGGTCGTGA-AAGGGAGGATTTATTTTGGTTCACAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1407116 224 - 107702431 TTTTAAA-TTTTTTGT-----AGTTTTTAAATTTTAAAA--GGGAAAAAAATCATCATGAAGAAAATTGC-ATTAAATTACTTTGACCACGCATTGCTTAGGGCTGAAAAATCACGTCAGCTAGATAGATGACAAGAGAGATGGG---GTCAACTCAGACCTACACTGGCATAGGAAACTGGTGAACTAGGAAACTCACCTTGGTCGTGA-AAGGGAGGATTTATTTTGGTTCACAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 884141 226 - 2200435 TTTAAAA-TTTTTTTT-----AGTTTTTAAATTTTAAAAAGGGAAAAAAAATCATCATGAAGAAAATTGC-ATTAAATTACTTTGACCACACATTGCTTAGGGCTGAAAAATCATGTCAGCTAGACAGACAACAGGAGAGATGGG---GTCGACTCAGACCTACACTGGCATAGGAAACTGGTGAACTAGGAAACTCACCTTGGTCGTGA-AAGGGAGGATTTATTTTGGTTCACAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1322279 227 - 13651311 TTTTAAATTTTTTTTT-----AGTTTTTAAATTTTAAAAAAAGGAAAAAAATCATCGTGAAGAAAATTGC-ATTAAATTACTTTGACCATGCATTGCTTAGGGCTGAAAAATCATGTCAGCTAGAAAGACAACAGGAGAGATGAG---GTCGACTCAGACCTACACTGGAATAGGAAACTGGTGAACTAGGAGATTCACCTTGGTCGTGA-AAGGGAGGATTTATTTTGGTTCACAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1330366 209 - 108792865 tttaata-ttttttct-----agtttttaaattttaaaaaGGGAAGAAA--TCATGGTGAAGAAAATTTC-ATTAA------------CCACATAGCTGAGGGCTGAAAAATCATGTAGGCTAGACAGACGCTAGGAGAGATGGA---CTGGACGCAGACACACACTGGCTTAGGAAACCG-TGAATCAGGAAGCTCACCT--GTCATGG-CAGGGAGGATTTATTTTGCTTTACAG i calJac3.chr14 I 1 C 0 s cebCap1.NW_016107827v1 1274485 195 + 1864846 TTTAATA-TGTTTTCT-----AGTTTTTAAAATTTAAAAAGGGAAAAAA--TCATGGTGAAGAAAATTGC-ATTAA------------CCACATAGCTCAGGGCTGAAAAATCATGTAGGCTAGACAGACGGTAGG-GAGATGGG---CCCGACTCAGACACACACGGGCTTAGGAAACCG----------------GCCTTGGTCAGGG-CGGGGAGGATTTATTTCGGTTTACCG i cebCap1.NW_016107827v1 I 1 C 0 s aotNan1.NW_018513311v1 63407 207 + 287728 TTTAATA-TTTTTTCT-----AGTTTTTAAATTTTAAAAAGGGAAAAAA--TCATGGTGAAGAAAATTGCGATTAA------------CCACATAGCTCAGGGCTGAAAAATCATG-----TACACAGACGGTAGGAGAGACGGA---CGGGGCTCAGACACACGCTGGCTTAGGAAACGG-TGAATTAGGAGACCCGCCTTGGTCAGGG-CAGGGGGGATTTATTTTGGTTTACAG i aotNan1.NW_018513311v1 I 12 C 0 s dasNov3.JH576208 1615848 226 + 4416731 TTTTCAT-TCTTTTTTCCACTAATTTTCAAATTTTAAGAAAGAAAACAT----ATCATTAAGAAAATGGC-ATGAATTTACATTG----TGTATTGCTTAAGGCTGATAAAACATGTAGATTAAAAAGAAAATAGGAGAAATAAGGCTCTTACACTAGATCTACACTAGCATAATGAA-TGGTTAATTAGGAAAGTTACCTTGCTAATGATTTTAAAAAATCCACTTTGGTCAACAG i dasNov3.JH576208 C 0 I 50 e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1181703 542 - 7082604 M e otoGar3.GL873658 910920 20 + 5252280 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=384875.000000 s hg38.chr2_KI270774v1_alt 58508 56 + 223625 TATtgtaagccaaaaagtgaccgaagcagatctcagtcaattagaagtttatgttg s panTro5.chr2A 1335783 56 + 111504155 TATtgtaagccaaaaagtgaccgaagcagatctcagtcaattagaagtttatgttg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1296239 56 + 114371477 TATTGTAAGCCAAAAAGtgaccgaagcagatctcagtcaattagaagtttatgttg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1321116 56 + 1464242 TATTGTAAGCCAAAAAGtgaccgaagcagatctcagtcaattagaagtttatgttg i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1381457 56 + 108979918 TATCgtaagccaaaacgtgaccgaagtagatctcaatcaattagaagtttatgttg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1353723 56 - 111193037 TATCgtaagccaaaacgtgaccgaagtagatctcaatcaattagaagtttatgttg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1381963 56 + 3644372 TATCgtaagccaaaacgtgaccgaagtagatctcaatcaattagaagtttatgttg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1335658 56 - 10304083 TATCgtaagccaaaacgtgaccgaagcagatctcaatcaattagaagtttatgttg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1407340 56 - 107702431 TATtgtaagccaaaacttgaccgaagcagttctcaatcaattagaagtttatgttg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 884367 56 - 2200435 TATCgtaagccaaaacgtgaccgaagcagatctcaatcaattagaagtttatgttg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1322506 55 - 13651311 TATTGT-agccgaaacgtgaccgaagcagatctcaatcaattagaagtttatgttg i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1330575 56 - 108792865 TACtgtcaacaaaagagtaaccggagcagacctcaatcaatttgtagtttattttg i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1274680 56 + 1864846 TACtataaacgaaaaagtgaccgaagcagatctcaatcaattagtagtttattttg i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 63614 52 + 287728 TACTGTaaacaaaaaagtggccgaagcagatc----tcaattagtagtttattttg i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89956681 3538 - 120129022 I e saiBol1.JH378218 1181703 542 - 7082604 M e otoGar3.GL873658 910920 20 + 5252280 I e dasNov3.JH576208 1616074 50 + 4416731 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=93261.000000 s hg38.chr2_KI270774v1_alt 58564 10 + 223625 ctaagattga s panTro5.chr2A 1335839 10 + 111504155 ctaagactga i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1296295 10 + 114371477 ctaagattga i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1321172 10 + 1464242 ctaagattga i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1381513 10 + 108979918 ctaagattga i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1353779 10 - 111193037 ctaagattga i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1382019 10 + 3644372 ctaagattga i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1335714 10 - 10304083 ctaagattga i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1407396 10 - 107702431 ctaagattga i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 884423 10 - 2200435 ctaagattga i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1322561 10 - 13651311 ctaagattga i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1330631 10 - 108792865 ctaagattga i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1182245 10 - 7082604 ctaaggttga i saiBol1.JH378218 M 542 C 0 s cebCap1.NW_016107827v1 1274736 10 + 1864846 ctaagattga i cebCap1.NW_016107827v1 C 0 I 314 s aotNan1.NW_018513311v1 63666 10 + 287728 ccaagattga i aotNan1.NW_018513311v1 C 0 I 267 e mm10.chr12 89956681 3538 - 120129022 I e otoGar3.GL873658 910920 20 + 5252280 I e dasNov3.JH576208 1616074 50 + 4416731 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=1760392.000000 s hg38.chr2_KI270774v1_alt 58574 330 + 223625 -gaatgtgcccggaaaaaacaaacacaagtcccagtgggacctgtgacccgagccttttccaaagagggttttgggaa-------ctttaaaggggaaagagcgagcaggaggggagaaggaaaaagagggagggcaggcagtggggcacagtcaggcatgtggccgcaatctcgtgggcctctgattagcgct-agtgaatccacgttttacacacgataaggtaagccctggaaatcacagctgcctgtttgggaataaaagggaggcagttt-tgtgtgacgcgggtcccaagcttaaccttccctgtggcatcgtgagtttggggtcttgagagtg s panTro5.chr2A 1335849 337 + 111504155 -gaatgtgcccggaaaaaacaaacacaagtcccagtgggacctgtgacccgagccttttccaaagagggttttgggaactttaatctttaaaggggaaagagcgagcaggaggggagaaggaaaaagagggagggcaggcagtggggcacagtcaggcatgtggccgcaatctcgtgggcctctgattagcgct-agtgaatccaggttttacacaagataaggtaagccctggaaatcacagctgcctgtttgggaataaaagggaggcagttt-tgtgtgacgcgggtcccaagcttaaccttccctgtggcatcgtgagtttggggtcctgagagtg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1296305 337 + 114371477 -gaatgtgccctgaaaaaacaaacacaagtcccagtgggacctgtgacccgagccttttccaaagagggttttgggaactttaatctttaaaggggaaagagcgagcaggaggggagaaggaaaaagagggagggcaggcagtggggcacagtcaggcatgtggccgcaatctcgtgggcctctgattagcgct-agtgaatccaggttttacacaagataaggtaagcCCTGgaaatcacagctgcctgtttgggaataaaagggaggcagttt-tgtgtgacgcgggtcccaagcttaaccttccctgtggcatcgtgagtttggggtcctgagagtg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1321182 335 + 1464242 -gaatgtgcccagaaaaaacaaacacaaatcccagtgggacctgtga-ccgagccttttccagagagggttttgggaactttaatctttaaaggggaaagagcgagcaggaggggagaaggaaaaagagggagggcgggcagtggggcacagtcaggcatgtggccgcaatctcgtgggcctctgattagcgct-agtgaatccacgttttacaCAAGATGAGGTAAGCCCTGgaaatcacagctgcctgtttgggaataaaagggaggcagttt-tgtgtgacgcgggtcccaagcttaaccttccctgt-gcatcgtgagtttggggtcctgagagtg i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1381523 339 + 108979918 -ggatgtgcccagaagaaagaaacacaagtcccagtgggacctgtgacctgagccttttccaaagagggtttggggaactttaattcttaacggggagagagcaagcaggaggggagaaggaaaaggagggagggcaggtggtggggcacagtgaggctcatggctgcattctcgtgggcctctgattagcactcagtgaatccaccttttacataaggtaaggtcagcccgggagatcacagctgcctgtctgggaacaaaagggaggcagtttttgtgtgacgcgggtcccaagctcagtcttccctgtggcatcgtgcgtttggggtcccaagagtg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1353789 339 - 111193037 -ggatgtgcccagaagaaagaaacacaagtcccagtgggacctgtgacctgagccttttccaaagagggtttggggaactttaattcttaacggggagagagcaagcaggaggggagaaggaaaaggagggagggcaggtggtggggcacagtgaggctcatggctgcattctcgtgggcctctgattagcactcagtgaatccaccttttacataaggtaaggtCAGCCCGGgagatcacagctgcctgtctgggaacaaaagggaggcagtttttgtgtgacgcgggtcccaagctcagtcttccctgtggcatcgtgcgtttggggtcccaagagtg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1382029 339 + 3644372 -ggatgtgcccagaagaaagaaacacaagtcccagtgggacctgtgacctgagccttttccaaagagggtttggggaactttaattcttaacgggaagagagcaagcaggaggggagaaggaaaaggagggagggcaggtggtggggcacagtgaggctcatggctgcattctcgtgggcctctgattagcactcagtgaatccaccttttacataaggtaaggtcagcccgggagatcacagctgcctgtctgggaacaaaagggaggcagtttttgtgtgacgcgggtcccaagctcagtcttccctgtggcatcgtgcgtttggggtcccaagagtg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1335724 339 - 10304083 -ggatgtgcccagaagaaagaaacacaagtcccagtgggacctgtgacctgagccttttccaaagagggtttggggaactttaattcttcaaggggagagagcaagcaggaggggagaaggaaaaggagggagggcaggtggtggggcacagtgaggctcatggctgcattctcgtgggcctctgattagcactcagtgaatccaccttttacataaggtaaggtaagccccggaaatcacagctgcctgtctgggaacaaaagggaggcagtttttgtgtgacgcgggtcccaagctcagtcttccctgtggcatcgtgcgtttggggtcctgagagtg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1407406 321 - 107702431 -ggatgtgcccagaagaaagaaacacaagtcccagtgggacctgtgacctgagccttttccaaagagggtttggggaactttaattcttaacggggagagagcaagcaggaggggag-caggaaaggagggagggcaggtggtggagcacagtgaggctcgtggctgcattcccgtgggcctctgattagcactcagtgaatccaccttttacataagataaggTCAGCCCGGgaaatcacagctgcctgtctgggaacaaaagggaggca-----------------gtcccaagctcagtcttacctgtggcatcgtgagtttggggtcctgagagtg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 884433 338 - 2200435 -ggatgtgcccagaagaaagaaacacaagtcccagtgggacctgtgacctgagccttttccaaagagggtttggggaactttaattcttcaaggggagagagcgagcaggaggggagacggtaaaggagggagggcaggtggtgg-gcacagtgaggctcatggccgcattctcgtgggcctctgatcagcactcagtgaatccaccttttacataaggtaaggtcagcccgggagatcacagctgcctgtctgggaacaaaagggaggcagtttttgtgtgacgcgggtcccaagctcagtcttccctgtggcatcgtgcgtttggggtcctgagagtg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1322571 338 - 13651311 -ggatgtgcccagaaaaaagaggcacaagtcccagtgggacctgtgacctgagccttttccaaagagggtttggggaactttaattcttaaaggggagagagcaagcaggaggggagaaggaaaaggagggagggcaggtggtgg-gcacagtcaggctcgtggctgcattcttgtgggcctctgattagcactcagtgaatccaccttttacataagataaagtaagcccgggaaatcacagctgcctgtctgggaacaaaagggaggcagtttgtgtgtgaggcgggtcccaagctcaaccttccctgtggcatcgtgagattggggtcctgagaacg i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1330641 272 - 108792865 aagatgtccctaggaaaaagaaac---------------acctgtgacccacgccttttccaaagagggttttgggaacttgactatt-----------------gcaggagggga--agcaggaggagggaaggcaggcg--ggggcacagcgaggcgcgtggctgcaatctcgtgggcttctgattagtgctcagtgaatccatgttttacgtaagagaaggTATGTCCGGgaagtcgcggccgtctgtctgggaacaaaaggaaggcagttttcattcgactcgggtcctgagctgaaccttccc-------------------------------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1182255 249 - 7082604 aaaatgtccctaggaaaaagaaac---------------acctgtgacccaagccttttccaa--agggctttgggaacttgactatt-----------------gcgggagggga--aggagg-ggagcgaag-----------------gcgaggcgcgtggctgcagtctcgtgggcccctgattagcgctcagtgaatccacgttttacTTAAGAGACGGTATGTCCGGGAAGTCGCGG----ctgtttgggaacaaaaggaaggccgttttcg-tcgactcgggtcctgagctgaaccttccc-------------------------------- i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 63676 267 + 287728 I e mm10.chr12 89956681 3538 - 120129022 I e cebCap1.NW_016107827v1 1274746 314 + 1864846 I e otoGar3.GL873658 910920 20 + 5252280 I e dasNov3.JH576208 1616074 50 + 4416731 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=300882.000000 s hg38.chr2_KI270774v1_alt 58904 45 + 223625 tgtttccttCACCGTGTCTACATCGTCCTTATGAAACATGTCCTG s panTro5.chr2A 1336186 45 + 111504155 tgtttccttCACCGTGTCTACATCGTCCTTATGAAACATGTCCCG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1296642 45 + 114371477 tgtttccttCACCGTGTCTACATCGTCCTTATGAAACATGTCCCG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1321517 45 + 1464242 tgtttccttCACCGTGTCTACATCGTCCTTATGAAACATGTCCCG i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1381862 45 + 108979918 tgtttccttcacCGTGTCTACGTCGTCCTTACAAAACATGTCCCG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1354128 45 - 111193037 tgtctccttCACCGTGTCTACGTCGTCCTTACAAAACATGTCCCG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1382368 45 + 3644372 tgtttccttcacCGTGTCTACGTCGTCCTTACAAAACATGTCCCG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1336063 45 - 10304083 tgtttccttcacCGTGTCTACGTCGTCCTTACGAAACATGTCCCG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1407727 45 - 107702431 tgtctccttCACCGTGTCTACATCGTCCTTACGAAACATGTCCCG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 884771 45 - 2200435 tgtttccttcacCGTGTCTACGTCGTCCTTACGAAACATGTCCCG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1322909 45 - 13651311 tgtttccttCACTGTGTCTACGTTGTCCTTATGAAATGTGCCCCG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1330913 44 - 108792865 TGTTTCTTTCTCCGCATCTACATCGT-CTGACAAAACACCTTTTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1182504 45 - 7082604 TGTTTCTTTCACCGCGTCTACGTCGTCCTGACCAAACACCTTCTG i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 63943 43 + 287728 tgttTCTTTCACCGCATCTACATCGTCCTGACGAA--ACTTTCTG i aotNan1.NW_018513311v1 I 267 C 0 e mm10.chr12 89956681 3538 - 120129022 I e cebCap1.NW_016107827v1 1274746 314 + 1864846 I e otoGar3.GL873658 910920 20 + 5252280 I e dasNov3.JH576208 1616074 50 + 4416731 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=79457.000000 s hg38.chr2_KI270774v1_alt 58949 8 + 223625 AGCACCCT s panTro5.chr2A 1336231 8 + 111504155 AGCACCCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1296687 8 + 114371477 AGCACCCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1321562 8 + 1464242 AGCACCCT i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1381907 8 + 108979918 AGCACCCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1354173 8 - 111193037 AGCACCCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1382413 8 + 3644372 AGCACCCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1336108 8 - 10304083 AGCACCCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1407772 8 - 107702431 AGCACCCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 884816 8 - 2200435 AGCACCCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1322954 8 - 13651311 AGCACCCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1330957 8 - 108792865 AGCACCCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1182549 8 - 7082604 AGCACCCT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1275060 8 + 1864846 AGCACCCT i cebCap1.NW_016107827v1 I 314 C 0 s aotNan1.NW_018513311v1 63986 8 + 287728 AGCGCCCT i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89956681 3538 - 120129022 I e otoGar3.GL873658 910920 20 + 5252280 I e dasNov3.JH576208 1616074 50 + 4416731 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=1600470.000000 s hg38.chr2_KI270774v1_alt 58957 207 + 223625 CATTTCCAACCCTGCAGGCATTGCTCAGGCCTCTGATTCTAAACTCTAGTTCTGGTTTTTG--GGGAAGCCACCTCCTCACTGCGA---------------------------------AT----------------------CTCTGATT-CC-----------------------------------------------------TTTG-------------------------------TTTGAGACACCAGAGGTGGGAAGACAGGA-----GGATTTTTCTAGTCACGCACAACGAACGTTT-CTCT----AATGCTATGCATGAGGGAATGACAGTGCTTCA---TCCAGCACAAC s panTro5.chr2A 1336239 207 + 111504155 CATTTCCAACCCTGCAGGCATTGCTCAGGCGTCTGATTCTAAACTCTAGTTCTGGTTTTTG--GGGAAGCCACCTCCTCACTGCGA---------------------------------AT----------------------CTCTGATT-CC-----------------------------------------------------TTTG-------------------------------TTTGAGACACCAGAGGTGGGAAGACAAGA-----GGATTTTTCCAGTCATGCACAACGAACGTTT-CTCT----AATGCTATGCATGAGGGAATGACAGTGCTTCA---TCCAGCACAAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1296695 207 + 114371477 CATTTCCAACCCTGCAGGCATTGCTCAGGCGTCTGATTCTAAACTCTAGTTCTGGTTTTTG--GGGAAGCCACCTCCTCACTGCGA---------------------------------AT----------------------CTCTGATT-CC-----------------------------------------------------TTTG-------------------------------TTTGAGACACCAGAGGTGGGAAGACAAGA-----GGATTTTTCCAGTCATGCACAACGAACGTTT-CTCT----AATGCTATGCATGAGGGAATGACAGTGCTTCA---TCCAGCACAAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1321570 229 + 1464242 CATTTCCAACCCTGCAGGCATTGCTCAGGCCTCTGATTCTAAACTCTAGTTCTGGTTGTTG--GGGAAGCCACGTCCTCACTGCGA---------------------------------AGGTGTGAAGGAATCAGAAACAAACTCTGATT-CC-----------------------------------------------------TTTG-------------------------------TTTGAGACACCAGAGGTGGGAAGACAGGA-----GGATTTTTCCAGTCATGCACAACAAACGTTT-CTCT----AATGCTATGCATGAGGGAATGACAGTTCTTCA---TCCAGCACAAC i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1381915 207 + 108979918 CATTTCCAACCCTGCAGGCCTTGCTCAGGCCTCTGATTCTAAACCCTAGTTCTGGTTTTTG--GGGAAGCCACTTCCTCACTGCAA---------------------------------AT----------------------CTCCGATT-CT-----------------------------------------------------TTTG-------------------------------TTTGAGACACCAGAGGTGGGAAGACAGGA-----GGATTTTTCCAGTCACGGACAACGAACGTTT-CTCT----AATGCTGTGCGTGAGGGAATGACAGTGTTTCA---TCCAGCACAAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1354181 207 - 111193037 CATTTCCAACCCTGCAGGCCTTGCTCAGGCCTCTGATTCTAAACCCTAGTTCTGGTTTTTG--GGGAAGCCACTTCCTCACTGCAA---------------------------------AT----------------------CTCCGATT-CT-----------------------------------------------------TTTG-------------------------------TTTGAGACACCAGAGGTGGGAAGACAGGA-----GGATTTTTCCAGTCACGGACAACAAACGTTT-CTCT----AATGCTGTGCGTGAGGGAATGACAGTGTTTCA---TCCAGCACAAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1382421 207 + 3644372 CATTTCCAACCCTGCAGGCCTTGCTCAGGCCTCTGATTCTAAACCCTAGTTCTGGTTTTTG--GGGAAGCCACTTCCTCACTGCAA---------------------------------AT----------------------CTCCGATT-CT-----------------------------------------------------TTTG-------------------------------TTTGAGACACCAGAGGTGGGAAGACAGGA-----GGATTTTTCCAGTCACGGACAACGAACGTTT-CTCT----AATGCTGTGCGTGAGGGAATGACAGTGTTTCA---TCCAGCACAAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1336116 208 - 10304083 CATTTCCAACCCTGCAGGCCTTGCTCAGGCCTCTGATTCTAAACCCTAGTTCTGGTTTTTG--GGGAAGCCACTTCCTCACTGCAG---------------------------------AT----------------------CTCTGATTCCT-----------------------------------------------------TTTG-------------------------------TTTGAGACACCAGAGGTGGGAAGACAGGA-----GGATTTTTCCAGTCATGGACAGCAAACGTTT-CTCT----AATGCTATGCGTGAGGGAATGACAGTGTTTCA---TCCAGCACAAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1407780 207 - 107702431 CATTTCCAACCCTGCAGGCCTTGCTCAGGCCTCTGATTCTAAACCCTAGTTCTGGTTTTCG--GGGAAGCCACTTCCTCACTGCAA---------------------------------AT----------------------CTCTGATT-CC-----------------------------------------------------TTTG-------------------------------TTTGAGACGCCAGAGGTGGGAAGACAGGA-----GGATTTTTCCAGTCATGGACAACGAATGTTT-CTCT----AATGCTATGCGTGAGGGAATGACAGTGTTTCA---TCCAGCACAAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 884824 208 - 2200435 CATTTCCAACCCTGCAGGCCTTGCTCAGGCCTCTGATTCTAAACCCTAGTTCTGGTTTTTG--GGGAAGCCACTTCCTCACTGCAG---------------------------------AT----------------------CTCTGATT-CC----------------------------------------------------TTTTG-------------------------------TTTGAGACACCAGAGGTGGGAAGACAGGA-----GGATTTTTCCAGTCATGGACAGGGAATGTTT-CTCT----AATGCTATGCGTGAGGGAATGACAGTGTTTCA---TCCAGCACAAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1322962 201 - 13651311 CATTTCCAACCCTGCAGGCCTTGCTCAGGCCTCTG------AACCCTAGTTCTGGTTTTTG--GGGAAGCCACTTCCTCACTGCAG---------------------------------AT----------------------CTCTGATG-CC-----------------------------------------------------TTTG-------------------------------TTTGAGACACCAGAGATGGGAAGACAGGA-----GGATTTTTCCAGTCATGGACAATGAACGTTT-CTCT----AATGCTGTGCGTGAGGGAATGACAGTGCTTCA---TCCAGCACAAC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1330965 211 - 108792865 CATTTCCAACCCTGCAGGCATCACTCAGGCAGCTGAT--TAAACCCTGGGTCTGGTTTTTG--GGGAAGCCACCTCCTAACTGCAC---------------------------------ATGT--------------------CTCTGATG-CT-----------------------------------------------------TTTG-------------------------------TTTGAGACACGGCAGACGGGAAGACAGGA-----GGGTTTTCCCCATCATGCACAGTGAGCGTTT-CTCTATATAATGCCATGCCTGAGGGAATGACAGTCTTGAA---TCCAGCACAGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1182557 213 - 7082604 GGTTTCCCACCCTGCCGGCATCACTCGGGCAGCGGATTCTCAACCCTAGGTCTGGTTTTAG--GGGAAGCCACCTCCTAACGGCAC---------------------------------ATGT--------------------CTCTGATG-CT-----------------------------------------------------TTTG-------------------------------TTTGAGACACGGCAGACGGGACGACAGGA-----GGGTTTTTCCAGACGTGCACAGTGAGCGTTT-CTGTATACAACGCCATGCCTGAGGGAATGACGGTCTTGAA---TCCGGCACCGC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1275068 213 + 1864846 TATTTCCAACCCTGCAGGCATCACTCAGGCAGCTGATTCTAAACCCTAGGTCTGGTTTTTG--GAGAAGCCACCTCCTAACGGCAC---------------------------------ATGT--------------------CTCTGATG-CT-----------------------------------------------------TTTG-------------------------------TTTGAGACACGGCAGACGGGAAGACAGGA-----GGGTTTTCCCCGTCAGGCACAGTGAGCGTTT-CTCTATATAATGCCATGCCTGAGGGAATGACAGCCTTGAA---TCCAGCACAGC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 63994 202 + 287728 CATTTCCAGCCCTGCGGGCATCACTCAGGCAGCTGACTCTAAACCCCAGGTCTGGTTTCTG--GGGAAGCCGCCTCCTAACTGCAC---------------------------------ATGC--------------------CTCTGATG-CT-----------------------------------------------------TTTG-------------------------------TTTGAGACACGGCAGACGGGAAGACAGGA-----GGGTTTT---------GCACAGTGAGCGTCT-CTCTATACAATGCCACGCCTGAGGGAATG--TGTCTTGAA---TCCAGCACAGC i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1616124 320 + 4416731 CATTTCCAACCCTA-------TACTCAAGCCTTTGATTCTAAATTCCATTTCTGGTTTTTGTTTTGAAGCTACATACCAACAACAGCTCAAGTCAATACTCTTGTTTTAAATGTTATCTAT----------------------CTCAGAGG-TCCAAAAAGCAGTAAAAGTTAAAATTATTAAGAAATATTTTACCAATTTTGGCATTTTGTCTATTTAGAAGATAAGGAAGAACTGTACGTTTTGAGAT-CCAGAGATGGGAAAACAGGATGTTTTGCTTTTTTTAATCATGCATAATGAATATTTGCACT----CATATTGGTC-------AATAACATTGTTGCAATGTTCAGCACATC i dasNov3.JH576208 I 50 I 69 e mm10.chr12 89956681 3538 - 120129022 I e otoGar3.GL873658 910920 20 + 5252280 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=128021.000000 s hg38.chr2_KI270774v1_alt 59164 17 + 223625 GGGTTCCTCTTCAGGGT s panTro5.chr2A 1336446 17 + 111504155 GGGTTCCCCTTCAGGGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1296902 17 + 114371477 GGGTTCCCCTTCAGGGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1321799 17 + 1464242 GGGTTCCTCTTCAGGGT i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1382122 16 + 108979918 -GGTGCCTCTTCAGTGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1354388 16 - 111193037 -GGTGCCTCTTCAGTGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1382628 16 + 3644372 -GGTGCCTCTTCAGTGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1336324 16 - 10304083 -GGTTCCTCTTCAGTGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1407987 16 - 107702431 -GGTTCCTCTTCAGTGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 885032 16 - 2200435 -GGTTCCTCTTCAGTGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1323163 16 - 13651311 -GGTTCCTCTTCGGTGT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1331176 17 - 108792865 AGGTGCCTCTTCAGTGT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1182770 17 - 7082604 AGGTGCCTCTTCGGTGT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1275281 17 + 1864846 AGATGCCTCTTCAGTGT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 64196 17 + 287728 AGGCGCCTCTTCAGCGT i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89956681 3538 - 120129022 I e otoGar3.GL873658 910920 20 + 5252280 I e dasNov3.JH576208 1616444 69 + 4416731 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=174632.000000 s hg38.chr2_KI270774v1_alt 59181 27 + 223625 GCCACGCCCCACACCTGCAGCCCAGCT s panTro5.chr2A 1336463 27 + 111504155 GCCACGCCCCACACCTGCAGCCCAGCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1296919 27 + 114371477 GCCATGCCCCACACCTGCAGCCCAGCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1321816 27 + 1464242 GCCACGCCCCACACCTGCAGCCCGGCT i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1382138 27 + 108979918 GCCGTGCCCGACACCTGCAGCCCAGCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1354404 27 - 111193037 GCCGTGCCCGACACCTGCAGCCCAGCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1382644 27 + 3644372 GCCGTGCCCGACACCTGCAGCCCAGCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1336340 27 - 10304083 GCCGTGCCCGACACCTGCAGCCCCGCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1408003 27 - 107702431 GCTGTGCCCGACACCTGCAGCCCAGCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 885048 27 - 2200435 GCCGTGCCTGACACCTGCAGCCCAGCT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1331193 24 - 108792865 GCCACGCCCAACACCTGCAACC---CG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1182787 27 - 7082604 GCCGCGCCCAACACGTGCACCCGGGCG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1275298 27 + 1864846 GCCACGCACAACACCTGCAACCTAGCT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 64213 27 + 287728 GCCACGCCCAACACCTGCAACCCGGCT i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89956681 3538 - 120129022 I e otoGar3.GL873658 910920 20 + 5252280 I e dasNov3.JH576208 1616444 69 + 4416731 I e colAng1.NW_012118821v1 1323179 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=721546.000000 s hg38.chr2_KI270774v1_alt 59208 118 + 223625 GCTGCAGGCTGCGTTTGCTGGACATGGG------------ACAC---CCAGCACGTGCATCGTGGTAATTCCTGTAAAT----AAAGATGAGCGCGGCACCATCTGTTCCTCCGAGGAGTTAGCAATCTCAGTATTT s panTro5.chr2A 1336490 115 + 111504155 GCTGCAGGCTGCGTTTGCTGGACATG---------------CAC---CCAGCACGTGCATCGTGGTAATCCCTGGAAAT----AAAGATGAGTGCGGCATCATCTGTTCCTCCGAGGAGTTAGCAATCTCAGTATTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1296946 115 + 114371477 GCTGCAGGCTGCGTTTGCTGGACATG---------------CAC---CCAGCACGTGCGTCGTGGTAATCCCTGGAAAT----AAAGATGAGTGCGGCATCATCTGTTCCTCCGAGGAGTTAGCAATCTCAGTATTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1321843 118 + 1464242 GCTGCAGGCTGCGTTTGCTGGACATGGG------------ACAC---CCAGCACGTGCATCGTGGTAATCCCTGGAAAT----AAAGATGAGCGCGGCACCATCTGTTCCTCCGAGGAGTTAGCAATCTCAGTATTT i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1382165 117 + 108979918 GCTGCAGGCTGCGTTTCCT-GACGTGGG------------ACAC---CCGGCACATACTTTGTGGTAATCCCTGGAAAT----AAAGACGAGCGCTGCACCATCTGTTCCTCCGAGGAGTTAACAATCTCGGTGTTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1354431 117 - 111193037 GCTGCAGGCTGCGTTTCCT-GACGTGGG------------ACAC---CCGGCACATACTTTGTGGTAATCCCTGGAAAT----AAAGACGAGCGCTGCACCATCTGTTCCTCCGAGGAGTTAACAATCTTGGTGTTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1382671 117 + 3644372 GCTGCAGGCTGCGTTTCCT-GACGTGGG------------ATAC---CCGGCACATACTTTGTGGTAATCCCTGGAAAT----AAAGACGAGCGCTGCACCATCTGTTCCTCCGAGGAGTTAACAATCTCGGTGTTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1336367 117 - 10304083 GCTGCAGGCTGCATTTGCT-GACGTGGG------------ACAC---CCGGCACATGCTTTGTGGTAATCCCTGGAAAT----AAAGACGAGCGCTGCACCATCTGTTCCTCCGAGGAGTTAACAATCTCGGTGTTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1408030 117 - 107702431 GCTGCAGGCTGCATTTGCT-GACGTGGG------------ACAC---CCGGCACATGCTTTGTGGTAATCCCTGGAAAT----AAAGACGAGCGCTGCACCATCTGTTCCTCCGAGGAGTTAACAATCTCGGTGTTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 885075 117 - 2200435 GCTGCAGGCTGCATTTGCT-GACATGGG------------ACAC---CCGGCACATGCTTTGTGGTAATCCCTGGAAAT----AAAGACGAGCGCTGCACCATCTGTTCCTCCGAGGAGTTAACAATCTCAGTGTTT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1331217 127 - 108792865 GCT----GCTGCATTTGCTGGGCGTGGGGCTGGGCATGGCACAC---CTGGCACATGCATTGAGGTCAT-CCCGGAAATACACAGTGACGCGC--GGCACCGTCTGTTCCTCCGCAGAGTTAGCCATCTCAGTGTTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1182814 115 - 7082604 GCTGCGGGCTGCGTCTGCTGGGCGCGGGCCTG-----------------GGCACAGGCATTGAGGTCGT-CCTGGAAAT----AGTGACGCGCGTGGCACCATCTGTTCCTCCGCGGAGTCAGCCATCCCAGTGTTT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1275325 133 + 1864846 GCTGCAGGCTGCCTCTGCTGGGCATGGGGCTGGGCGTGGCACAC---CTGGCACATGCATTGAGGTCGT-CCTGGAAATAAATAGTGACGCACGCGGCACCATCTGTTCCTCCGCGGAGTTAGCCATCTCAGTGTTT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 64240 132 + 287728 GCTGCAGGCT-CATTTGCTGGGCATGGGGCTGGGCATGGCACAC---CTGGCACATGCACTGAGGTCAT-CCTGGAAATAAACAGTGATGCGCGCGGCACCATCTGTTCCTCCGCGGAGTTAGCCATCTCAGCGTTT i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1616513 123 + 4416731 ATTGTGTTCCGTGTTTGTTGGATGTGGG------------ACATATACCAACACATACAACATCCTAATCCAtagaaatag--aaagatgaagaagacaccatctcttccttcaaggatttaacaatctaatTAATT i dasNov3.JH576208 I 69 C 0 e mm10.chr12 89956681 3538 - 120129022 I e otoGar3.GL873658 910920 20 + 5252280 I e colAng1.NW_012118821v1 1323179 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=135551.000000 s hg38.chr2_KI270774v1_alt 59326 18 + 223625 TCTTCGTAAATCCAAATT s panTro5.chr2A 1336605 18 + 111504155 TCTTCGTAAATCCAAATT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1297061 18 + 114371477 TCTTCGTAAATCCAAATT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1321961 18 + 1464242 TCTTCGTAAATCCGAATT i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1382282 18 + 108979918 TCTTCGTAAATTCAAATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1354548 18 - 111193037 TCTTCGTAAATTCAAATG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1382788 18 + 3644372 TCTTCGTAAATTCAAATG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1336484 18 - 10304083 TCTTCGTAAATTCAAATG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1408147 18 - 107702431 CCTTTGTAAATTCAAATG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 885192 18 - 2200435 TCTTCGTAAATTCAAATG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1331344 18 - 108792865 TCTTCATAGATCCAAACG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1182929 18 - 7082604 TCTTCGTAGATCCAAATG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1275458 18 + 1864846 TCTTCATAGATCCACATA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 64372 18 + 287728 TCTCCATAGATCCAAATG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 910940 18 + 5252280 TCTTTGTCAAACCAAATG i otoGar3.GL873658 I 20 C 0 s dasNov3.JH576208 1616636 18 + 4416731 GTGTTATAGACCAAAATG i dasNov3.JH576208 C 0 I 454 e mm10.chr12 89956681 3538 - 120129022 I e colAng1.NW_012118821v1 1323179 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=613304.000000 s hg38.chr2_KI270774v1_alt 59344 97 + 223625 ATCCATTGT-AGAGCTAATGGGTATAAAACCCGCCATCACTGCACTGCCTGCCCCAGGAACCAGGGCCATGC--AAATGTCTCGCTCT----GAAACTGAGACT s panTro5.chr2A 1336623 97 + 111504155 ATCCATTGT-AGAGCTAATGGGTATAAAACCCGCCATCACCGCACTGCCTGCCCCAGGAACCAGGGCCGTGC--AAATGTCTCGCTCT----GAAACTGAGACT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1297079 97 + 114371477 ATCCATTGT-AGAGCTAATGGGTATAAAACCCGCCATCACCGCACTGCCTGCCCCAGGAACCAGGGCCGTGC--AAATGTCTCGCTCT----GAAACTGAGACT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1321979 97 + 1464242 ATCCATTGT-AGAGCTAATGGGTATAAAACCCGCCATCACTGCACTGCCTGCCCCAGGAACCAGGGCCATGC--AAATGTCTCGCTCT----GAAACTGAGACT i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1382300 95 + 108979918 ATCCATTGC-AGATCTAAT--ATATAAAACCCGCCATCACTGCACTGCCTGCCCCAGGAACCAGGGCCACCC--AAATGTCTCGCTCT----GAAACTGAGACT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1354566 95 - 111193037 ATCCATTGC-AGATCTAAT--ATATAAAACCCGCCATCACTGCACTGCCTGCCCCAGGAACCAGGGCCACCC--AAATGTCTCGCTCT----GAAACTGAGACT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1382806 95 + 3644372 ATCCATTGC-AGATCTAAT--ATATAAAACCCGCCATCACTGCACTGCCTGCCCCAGGAACCAGGGCCACCC--AAATGTCTCGCTCT----GAAACTGAGACT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1336502 97 - 10304083 ATCCATTGC-AGAGCTAACGGATATAAAACCCGCCATCACTGCACTGCCTGCCCCAGGAACCAGGACCTCCC--AAATGTCTCGCTCT----GAAACTGAGACT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1408165 97 - 107702431 ATCCATTGC-AGATCTAACAGATATAAAACCCGCCATCCCTGCGCTGCCTGCCCCAGCAACCAGGGCCACCC--AAATGTCTCGCTCT----GAAACTGAGACT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 885210 97 - 2200435 ATCCATTGC-AGAGCTAACGGATATAAAACCCGCCATCACTGCACTGCCTGCCCCAGGAACCAGGGCCACCC--AAATGTCTCGCTCT----GAAACTGAGACT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1331362 98 - 108792865 TTCCATTGG-AGAGCTGATGGATGTAAAACCCGCCGTCCCTGCAGGGCCTACCCCAGGAACCAGGGTCACCC-AAAATGGCTCACTCT----GAAACTGAGACT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1182947 68 - 7082604 TTCCA-------------------------------TCACTGCAGGGCCCACCCCAGGAACCAGGGTCACCC-AAAATGGCTCACTCT----GAAACTGAGACT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1275476 68 + 1864846 TTCCA-------------------------------TCACTGCAGGGCCCACCCCAGGAACCAGGGTCACCC-AAAATAGCTCACTCT----GAAACTGAGACT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 64390 98 + 287728 TTCCACTGG-AGAGCTGATGGACGTAAAAGCCGCCGTCAGTGCAGGGCCTACCCCAGGAACCAGGGTCTCCC-AAAACGGCTCAGTCT----GAAACTGAGACT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 910958 95 + 5252280 TTCCCTCCC-AGAGCTGAGGAATATAAAGGCTTCCACCACTGCCCTGACTGCCATGGGA---AGCGTCTCCCTGAAGTGTCCC-CTTT----GAGCCTGGGATG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1617108 102 + 4416731 ATCTACTGTAAGAAGAAATGGAAATAAAATCTACCATCCCTCTATTACCTGCTGTATGAACTA-TACTACAT-GAAATGTCTCACTTGTTTAAAAACTGAGACT i dasNov3.JH576208 I 454 I 1287 e mm10.chr12 89956681 3538 - 120129022 I e colAng1.NW_012118821v1 1323179 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=811275.000000 s hg38.chr2_KI270774v1_alt 59441 114 + 223625 CAG------------------------------AGTGTCTCCTCTGTC----------------TTTATTCCTTTCCAGTGAAAGCTCCCACATGCGTTGATGTGAACTGGATTGACCAGACATTTTGCTCTTTTAAACAATGGTTTAGGGAGGTTCCTA s panTro5.chr2A 1336720 114 + 111504155 CAG------------------------------AGTGTCTCCTCTGTC----------------TTTATTCCTTTGCAGTGAAAGCTCCCACATGCGTTGATGTGAACTGGATTGAGCAGACATTTTGCTGTTTTAAACAATGGTTTAGGGAGGTTCCTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1297176 114 + 114371477 CAG------------------------------AGTGTCTCCTCTGTC----------------TTTATTCCTTTGCAGTGAAAGCTCCCACATGCGTTGATGTGAACTGGATTGAGCAGACATTTTGCTGTTTTAAACAATGGTTTAGGGAGGTTCCTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1322076 114 + 1464242 CAG------------------------------AGTGTCTCCTCTGTC----------------TTTATTCCTTTCCAGTGAAAGCTCCCACATGCGTTGATGTGAACTGGATTGAGCAGACATTTTGCTCTTTTAAACAATGGTTTAGGGAGGTTCCTA i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1382395 114 + 108979918 CGG------------------------------GGTGTCTCCGCTGTC----------------CTTATTCCTTTTCAGTGAACGTTCCCACACACGTCGATGTGAACTGGATTGACTAGATATTTTGCTCTTTTAAACAGTATTTTAGGGAGGTTCCTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1354661 114 - 111193037 CGG------------------------------GGTGTCTCCGCTGTC----------------CTTATTCCTTTTCATTGAACGTTCCCACACACGTCGATGTGAACTGGATTGACTAGATATTTTGCTCTTTTAAACAGTATTTTAGGGAGGTTCCTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1382901 114 + 3644372 TGG------------------------------GGTGTCTCCGCTGTC----------------CTTATTCCTTTTCAGTGAACGTTCCCACACACGTCGATGTGAACTGGATTGACTAGATATTTTGCTCTTTTAAACAGTATTTTAGGGAGGTTCCTA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1336599 114 - 10304083 CGG------------------------------GGTGTCTCCGCTGTC----------------CTTATTCCTTTTCAGTGAACGTTCCCACACACGTCGATGTGAACTGGATTGACTAGACATTTTGCTTTTTTAAACAGTATTTTAGGGAGGTTCCTA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1408262 114 - 107702431 CGG------------------------------GGTGTCTCCGCTGTC----------------CTTATTCCTTTTCAGTGAACATTCCCACACACGTCGATGTGAACTGGATTGACCAGATATTTTGCTCTTTTAAACAGTATTTTAGGGAGGTTCCTA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 885307 114 - 2200435 CGG------------------------------GGTGTCTCCGCTGTC----------------CTTATTCCTTTTCAGTGAACGTTCCCACACATGTCGATGTGAACTGGATTGACTAGACATTTTGCTCTTTTAAACAGTATTTTAGGGAGGTTCCTA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1331460 114 - 108792865 CAG------------------------------AGTGTCTCCTCTGTC----------------TTCACTCCTTTTCAGTGAAAGCTCCCACGCATGTTGATGTGAAGTGGATGGACCAGACATTTTGCTCTTTTAAACAATACTTGAGGGAAGTTCCTA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1183015 112 - 7082604 CAG------------------------------AGCGTCTCCTCTGTC----------------TTTACTCCTTTTCGGTGAAAGCTCCCACACATGTTGATGTGAACTGGACTGAGCAGACATTTTGCTCTTTTAAAC--TACTTTAGGGAAGTTCCTA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1275544 114 + 1864846 CAG------------------------------AGTGTCTCCTCTGTC----------------TTTACTCCTTTTCAGGGAAAGCTCCCACACATGTTGATGTGAACTGGATTGACCAGACATTTTGCTCTTTTAAACAATACTTTAGGAAATTTCCTA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 64488 112 + 287728 C--------------------------------AGTGTCTCCTCTGTC----------------TTTACTCCTGTTCAGTGAAAGCTCCCACACATGTTGATGTGAACTGGATCGACCAGACATTTTGCTCTTTTAAGCAAGACTTTGGGGAAGTTCCTA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 911053 158 + 5252280 CAGAGAAAGCCTCTGATTTTCCCACGCTGGTGAAGTGTCAGCTGTGCCTGTGAAAAGTCCCCTTTTTATTCCTGTCCAGTGAAAGCT-TAGCCCGAGTTCATCTGGACTTCATCAGCCATTCACTGTGCTCTTTAAAACACT-CATAAGGGAGGGTCTTA i otoGar3.GL873658 C 0 C 0 e mm10.chr12 89956681 3538 - 120129022 I e dasNov3.JH576208 1617210 1287 + 4416731 I e colAng1.NW_012118821v1 1323179 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=774941.000000 s hg38.chr2_KI270774v1_alt 59555 99 + 223625 AAAGTTTCTTTGATTTGTTAAATACGTTATGAAGAAACTATTTTGTAGTATTCATAGAGATTCAATTTCCACTTAGCCATTGATCCAAAG--TGACATTTT s panTro5.chr2A 1336834 99 + 111504155 AAAGTTTCTTTGATTTATTAAATACATTATGAAGAAACTATTTTGTAGTATTCATAGAGATTCAATTTCCACTTAGCCATTGATCCAAAG--TGACATTTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1297290 99 + 114371477 AAAGTTTCTTTGATTTATTAAATACATTATGAAGAAACTATTTTGTAGTATTCATAGAGATTCAATTTCCACTTAGCCATTGATCCAAAG--TGACATTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1322190 98 + 1464242 AAAGTTT-TTTGATTTATTAAATACGTTATGAAGAAACTATTTTGTAGTATTCATAGAGATTCAATTTCCACTTAGCCATTGATCCAAAG--TGACATTTT i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1382509 99 + 108979918 AAAGTTTCTTTGATTTATTAAATACGTTATGAAGGAACTATTTTGTCATATTCATAGAGATTCGATTTCTACTTAGCCATTGATCCAAAG--TGACATTTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1354775 99 - 111193037 AAAGTTTCTTTGATTTATTAAATACGTTATGAAGGAACTATTTTGTCATATTCATAGAGATTCGATTTCTACTTAGCCATTGATCCAAAG--TGACATTTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1383015 99 + 3644372 AAACTTTCTTTGATTTATTAAATACGTTATGAAGGAACTATTTTGTCATATTCATAGAGATTCGATTTCTACTTAGCCATTGATCCAAAG--TGACATTTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1336713 99 - 10304083 AAAGTTTCTTTGATTTATTAAATACGTTATGAAGGAACTATTTTGTCATATTCATAGAGATTCAGTTTCTACTTAGCCATTGATCCAAAG--TGACATTTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1408376 99 - 107702431 AAAGCTTCTTTGATTTATTAAATACGTTATGAAGGAACTATTTTGTCATAGTCATAGAGATTCGATTTCTACTTAGCCATTGATCCAAAG--TGACATTTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 885421 99 - 2200435 AAAGTTTCTTTGATTTATTAAATACGTTATGAAGGAACTATTTTGTCATATTCATAGAGATTCGATTTCTACTTAGCCATTGATCCAAAG--TGACATTTT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1331574 99 - 108792865 AAAGTTCGTTTGATTTATTAAATACGTTATGAAGGAACTATTTTGTAGTATTCATGGAGATTCAGTTTCCACTTAGCAATTGATCCGAAG--TGACATTTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1183127 99 - 7082604 AAAGTTTTTTTGATTTATTAAATGTGTTATGAAGGAACTATTTTGTAGTATTCATAGAGATTCAATTTCCACTTAGCAATTGATCCGAAG--TGACATTTT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1275658 94 + 1864846 AAACGTTG-----TTTATTAAATATGTTATGAAGGAACTATTTTGTAGTATTCATACAGATTCAGTTTCCACTTAGCAATTGATCCGAAG--TGACATTTT i cebCap1.NW_016107827v1 C 0 I 13 s aotNan1.NW_018513311v1 64600 97 + 287728 AAAGTTCGTTTGATTTATTAAATATGTTATGAAGGAACTATTCTGTAGCATTCA--GAGAGTCAGTTTCCACTTAGCAATTGATCTGAAG--TGACATTTT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 911211 91 + 5252280 AACGTTTGTTTGATCCATCAAATGCCTTGTTAAGCAGCTGTT-TGTTTTAATCCTAGA-ATTTAATCCCCTCTTAGAAATCCATT-------TGAGACTT- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1618497 90 + 4416731 aaagtctcttgga-----------cattcttaaaGAGCTATTTGCTTGTATCTCTAGAGATTCCATTTCTGTTTGGAAATTGATCCAAGACCTAGCTTTCT i dasNov3.JH576208 I 1287 C 0 e mm10.chr12 89956681 3538 - 120129022 I e colAng1.NW_012118821v1 1323179 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=29920.000000 s hg38.chr2_KI270774v1_alt 59654 9 + 223625 TGCTTGT-----TA----- s panTro5.chr2A 1336933 9 + 111504155 TGCTTGT-----TA----- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1297389 9 + 114371477 TGCTTGT-----TA----- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1322288 9 + 1464242 TGCTTGT-----TA----- i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1382608 14 + 108979918 TGCTTATCGTGGCA----- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1354874 14 - 111193037 TGCTTATCGTGGCA----- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1383114 14 + 3644372 TGCTTATCGTGGCA----- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1336812 14 - 10304083 TGCTTATCGTGGCA----- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1408475 14 - 107702431 TGCTTATCGTGGCA----- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 885520 14 - 2200435 TGCTTATCGTGGCA----- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1331673 9 - 108792865 TGCCTGT-----CA----- i calJac3.chr14 C 0 I 5 s saiBol1.JH378218 1183226 9 - 7082604 TGCCTAT-----CA----- i saiBol1.JH378218 C 0 I 5 s aotNan1.NW_018513311v1 64697 9 + 287728 TGCCTAT-----CA----- i aotNan1.NW_018513311v1 C 0 I 5 s dasNov3.JH576208 1618587 14 + 4416731 AATTTAT-----CATATAA i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89956681 3538 - 120129022 I e cebCap1.NW_016107827v1 1275752 13 + 1864846 I e otoGar3.GL873658 911302 0 + 5252280 C e colAng1.NW_012118821v1 1323179 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=756483.000000 s hg38.chr2_KI270774v1_alt 59663 114 + 223625 TGATGAGCCTTCTGAAG-TGAGGCGTGGTCTCAACATCACCCGTGGTGATTACACG---GGGCATTCGCGGG----------------AGCACCAGCGTGGGGCTG-------------AGGCTGTTCCTGATGGTGCCCAGGGCAG s panTro5.chr2A 1336942 114 + 111504155 TGATGAGCCTTCTGAAG-TGAGGCGTGGTCTCAACATCACCCGTGATGATTACACG---GGGCATTCGCGGG----------------TGCACCAGCGTGGGGCTG-------------AGGCTGTTCCTGATGGTGCCCAGGGCAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1297398 114 + 114371477 TGATGAGCCTTCTGAAG-TGAGGCGTGGTCTCAACATCACCCGTGATGATTACACG---GGGCATTCGCGGG----------------CGCACCAGCGTGGGGCTG-------------AGGCTGTTCCTGATGGTGCCCAGGGCAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1322297 114 + 1464242 TGATGAGCCTTCTGCAG-TGAGGCGTGGTCTCAACATCACCCGTGATGATTACACG---GGGCATTCGTGGG----------------CGCACCAGTGTGGGGCTG-------------AGGCTGTTCCTGATGGTGCCCAGGGCAG i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1382622 108 + 108979918 TGATGAACCTTCTGAAG-TGAGGTGTGGTCTCAACATCACCCACGACGATTACACA---GGGCATTCGCGGG----------------CGCACGAGCATGGGGCTG-------------AGGCTGTTCCTGACGGTGCCCA------ i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1354888 108 - 111193037 TGATGAACCTTCTGAAG-TGAGGTGTGGTCTCAACATCACCCACGACGATTACACG---GGGCATTCGCGGG----------------CGCACGAGCATGGGGCTG-------------AGGCTGTTCCTGACGGTGCCCA------ i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1383128 108 + 3644372 TGATGAACCTTCTGAAG-TGAGGTGTGGTCTCAACATGACCCACGACGATTACACG---GGGCATTCGCGGG----------------TGCACGAGCATGGGGCTG-------------AGGCTGTTCCTGACGGTGCCCA------ i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1336826 108 - 10304083 TGATGAACCTTCTGAAG-TGAGGTGTGGTCTCAACATCACCCACGACAATTACACG---GGGCATTCACGGG----------------CGCACGAGCATGGGGCTA-------------AGGCTGTTCCTGACGGTGCCCA------ i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1408489 108 - 107702431 TGATGAACCTTCTGAAG-TGAGGTGTGGTCTCAACATCACCCATGACGATTACACG---GGGCATTCGCGGG----------------CGCACGAGCGTGGGGCTG-------------AGGCTGTTCCTGACAGTGCCCA------ i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 885534 108 - 2200435 TGATGAACCTTCTGAAG-TGCGGTGTGGTCTCAACATCACCCACAACAATTACACG---GGGCATTCACGGG----------------CGCACGAGCGTGGGGCTG-------------AGGCTGTTCCTGACGGTGCCCA------ i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1331687 113 - 108792865 TGATGAGCCTTCTGAA--TGAGGCCTGGTCTCAACATCACCCACGACAATTGAACG---GGACATTCTCGGG----------------CACTGCAGCGTTGGGCTA-------------AGGCTGTCCCTGACGGTGTCCAGGGCGG i calJac3.chr14 I 5 C 0 s saiBol1.JH378218 1183240 113 - 7082604 TGAGGAGCCTTCTGAA--TGAGACCTGGTCTCAACATCACCCACGACAATTGAACG---GGACATTCACGGG----------------CACACCAGCGTGGGGCTG-------------AGGCTGTTCCTGACGGTGTCCAGGGCAG i saiBol1.JH378218 I 5 C 0 s cebCap1.NW_016107827v1 1275765 113 + 1864846 TTATGAGCCTTCTGAA--TGAGGCCTGGTCTCAACATCACCCACGACAATTGAACG---GGACATTCTCGGG----------------CACACCAGTGTGGGGCTG-------------CGGCTGTTCCTGACGGTGTCCAGGGCGG i cebCap1.NW_016107827v1 I 13 C 0 s aotNan1.NW_018513311v1 64711 113 + 287728 TGATGGGCCTTCTGAA--TGAGGCCTGGTCTCAACATCACCCACGACAATTGAACG---GCACATTCGCGGG----------------CACACCAGCCCGGGGCTG-------------AGGCTGTTCCTGACGGTGTCCAGGGCGG i aotNan1.NW_018513311v1 I 5 C 0 s otoGar3.GL873658 911302 117 + 5252280 -GGTGAGCCTGCCGAG-----AGCATGGTGGC--CACCACCACTGCTCACTGCACGCTCAAGCAGCTAATGC----------------CCCCCCAGGTGTGGGCTGCCATCCCGGAGCCATGCAGACCCTCACTGTCTCCA------ i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1618601 127 + 4416731 TGATAATCCTTCTGGAACTAGAAAAAAATCTTAATATTATCCACAACAGTT-CACA---GGATATTCAAAGAGCTGAAAACCCAAAATAGCACAATCTTGGGGCCA-------------A---TATCATTGATGATGATAATGGCAG i dasNov3.JH576208 C 0 I 412 e mm10.chr12 89956681 3538 - 120129022 I e colAng1.NW_012118821v1 1323179 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=546298.000000 s hg38.chr2_KI270774v1_alt 59777 105 + 223625 TGCTGATAGTGGAGGAGAGAGC-CTGGTCTGAACAGCA-CCCCCAGTCCAGTCCACACGGATGAGGCAGGGCAGGA----G-ATTCACCCTCCACCTCCCAGACCCATGACC s panTro5.chr2A 1337056 106 + 111504155 TGCTGATAGTGGAGGAGAGAGC-CTGGTCTGAACAGCACCCCCCAGTCCAGTCCACACGGATGAGGCAGGACAGGA----G-ATTTACCCTCCACCTCCCAGACCCATGACC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1297512 106 + 114371477 TGCTGATAGTGGAGGAGAGAGC-CTGGTCTGAACAGCACCCCCCAGTCCAGTCCACACGGATGAGGCAGGGCAGGA----G-ATTTACCCTCCACCTCCCAGACCCATGACC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1322411 106 + 1464242 TGCTGATAGTGGAGGAGAGAGC-CTGGTCTGAACAGCACCCCCGAGTCCAGTCCACACGGATGAGGCAGGGCAGGA----G-ATTTACCCTCCACCTCCCAGACCCATGACC i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1382730 89 + 108979918 -----------GAGGAGAGAGC-CTGGTCTGAACAGCACCGC-----CCGCTCCACACGGATGGCGCAGGGCAGGA----G-CTTTACCCTCCACCTCCCA-ACCCATGGTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1354996 89 - 111193037 -----------GAGGAGAGAGC-CTGGTCTGAACAGCACCGC-----CCGCTCCACACGGATGGCGCAGGGCAGGA----G-CTTTACCCTCCACCTCCCA-ACCCATGGTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1383236 89 + 3644372 -----------GAGGAAAGAGC-CTGGTCTGAACAGCACCGC-----CCGCTCCACACGGATGGCGCAGGGCAGGA----G-CTTTACCCTCCACCTCCCA-ACCCATGGTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1336934 89 - 10304083 -----------GAGGAGAGAGC-CTGGTCTGAACAGCACCCC-----CCGCTCCACACGGATGACGCAGGGCAGGA----G-CTTTACCCTCCACCTCCCA-ACCCATGGCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1408597 88 - 107702431 -----------GAGGAGAGAGC-CTGGTCTGAACAGCACCCC------CGCTCCACACGGATGGCACAGGGCAGGA----G-CTTTACCCTCCACCTCCCA-ACCCATGGCC i chlSab2.chr14 C 0 I 219 s manLeu1.NW_012103754v1 885642 89 - 2200435 -----------GAGGAGAGAGC-CTGGTCTGAACAGCACCCC-----GCGCTCCACACGGATGACGCAGGGCAGGA----G-CTTTACCCTCCACCTCCCA-ACCCATGGCC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1331800 101 - 108792865 CGCTGACAGCAGGACACGGAG--CTGGTCTGAACAGCACTGC-----CTGCTCCACACGGATGACGCAGGGGAGGG----AGCTTTACCCCCCACCTCTCAGGCCCATGGCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1183353 98 - 7082604 CGCTGAGAGCAGGGGAGGGAG--CTGGTCTG-ACAGCCCCGC-----CCGCTCCACACAGATGACGCAGGGCAGGA----G--CTTACCCTCCACCTCCCAGGCCCATGGCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1275878 100 + 1864846 CACTGACAGCAGGGGAGGGAG--CTGGTCTGAACAGAACCAC-----CCGCTCCACACAGATGAAGCTGGGCGGGA----G-CTTTACCCTCCACCTCCCAGGCCCATGGCC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 64824 100 + 287728 CACTGACGGCAAGGGAGGGAG--CAGGTCTGAACAGCACCGC-----CCGCTCCACACAGATGATGCAGGGCGGGA----G-CTTTTCCCTCCACCTCCCAGGCCCATGGCC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 911419 86 + 5252280 --TCGCCAGGTCAGGAAGGGGTGCTGGCCTCACTGACACTGC------CAGGCTGTGTGGTCATCACACGGGGAGGCCCCG-CTGGCCCCTCCAC----------------- i otoGar3.GL873658 C 0 C 0 e mm10.chr12 89956681 3538 - 120129022 I e dasNov3.JH576208 1618728 412 + 4416731 I e colAng1.NW_012118821v1 1323179 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=51904.000000 s hg38.chr2_KI270774v1_alt 59882 7 + 223625 GAGCACC s panTro5.chr2A 1337162 7 + 111504155 AAGCACC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1297618 7 + 114371477 AAGCACC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1322517 7 + 1464242 GAGCACC i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1382819 7 + 108979918 GAGCACC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1355085 7 - 111193037 GAGCACC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1383325 7 + 3644372 GAGCACC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1337023 7 - 10304083 GAGCACC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1408904 7 - 107702431 GAGCACC i chlSab2.chr14 I 219 C 0 s manLeu1.NW_012103754v1 885731 7 - 2200435 GAGCATC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1331901 7 - 108792865 CAGCACC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1183451 7 - 7082604 AAGCACC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1275978 7 + 1864846 AAGCACC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 64924 7 + 287728 AAGCACC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 911505 5 + 5252280 --GGAGC i otoGar3.GL873658 C 0 C 0 e mm10.chr12 89956681 3538 - 120129022 I e dasNov3.JH576208 1618728 412 + 4416731 I e colAng1.NW_012118821v1 1323179 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=241352.000000 s hg38.chr2_KI270774v1_alt 59889 34 + 223625 CTTCACACCACCCCTTTCTCCTGTGAAAGAAAAG s panTro5.chr2A 1337169 34 + 111504155 CTTCACACCACCCCTTTCTCCTGTGAAAGAAAAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1297625 34 + 114371477 CTTCACACCACCCCTTTCTCCTGTGAAAGAAAAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1322524 29 + 1464242 CTTCATACCACCCCTTT-TCCTGTGAAAGA---- i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1382826 34 + 108979918 CTTCACACCACCCCCGTCTCCCATGAAAGAAGAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1355092 34 - 111193037 CTTCACACCACCCCCGTCTCCCATGAAAGAAGAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1383332 34 + 3644372 CTTCACACCACCCCCGTCTCCCATGAAAGAAGAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1337030 34 - 10304083 CGTCACACCACCCCCATCTCCCATGAAAGAAGAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1408911 34 - 107702431 CTTCACACCACCCTCGTCTCCCATGAAAGAAGAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 885738 34 - 2200435 CTTCACACCACCCTCGTCTCCCATGAAAGAAGAG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1331908 30 - 108792865 CTTCACACCACCCCTTTCTCCCGTGAAAGA---- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1183458 29 - 7082604 TTTCACACCACCCCTTTCTCCCGTGAAAG----- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1275985 30 + 1864846 CTTCACACCACCCCTTTCTCCTGTGAAAGA---- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 64931 30 + 287728 CTTCACACCACCCCTTTCTCCCGTGAAAGA---- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 911510 34 + 5252280 CTGCTCACTGCCCTTTGCACCCATGAAACGAGAG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1619140 34 + 4416731 CTTCACACTGCCCCTTTATCCAATGAAATAAGAG i dasNov3.JH576208 I 412 I 213 e mm10.chr12 89956681 3538 - 120129022 I e colAng1.NW_012118821v1 1323179 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=402552.000000 s hg38.chr2_KI270774v1_alt 59923 67 + 223625 TAAAGACACTTAACAAAAAGTGATATTCTCAAACAAAAAGTAATAT-TCTTTAACAAAAAGTAAAACA s panTro5.chr2A 1337203 67 + 111504155 TAAAGACACTTAACAAAAAGTGGTATTCTCAAACAAAAAGTAATAT-TCTTTAACAAAAAGTAAAACA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1297659 67 + 114371477 TAAAGACACTTAACAAAAAGTGGTATTCTCAAACAAAAAGTAATAT-TCTTTAACAAAAAGTAAAACA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1322553 66 + 1464242 -AAAGACACTTAACAAAAAGTGATATTCTCAAACAAAAAGTAATAT-TCTTTAACAGAAAGTAAAACA i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1382860 66 + 108979918 TAAAGACATTTAACAAAAAGCGATATTCTC-AACAAAAAGTGATTT-TCTTTAACAAAAAGTAAAACA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1355126 66 - 111193037 TAAAGACATTTAACAAAAAGCGATATTCTC-AACAAAAAGTGATTT-TCTTTAACAAAAAGTAAAACA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1383366 66 + 3644372 TAAAGACATTTAACAAAAAGCGATATTCTC-AACAAAAAGTGATTT-TCTTTAACAAAAAGTAAAACA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1337064 66 - 10304083 TAAAGACATTTAACAAAAAGCGATATTCTC-AACAAAAAGTGATTT-TCTTTAACAAAAAGTAAAACA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1408945 66 - 107702431 TAAAGACATTTAACAAAAAGCGATATTCTC-AACAAAAAGTGATTT-TCTTTAACAAAAAGTAAAACA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 885772 66 - 2200435 TAAAGACATTTAACAAAAAGCGGTATTCTC-AACAAAAAGTGAGTT-TCTTTAACAAAAAGTAAAACA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1331938 66 - 108792865 -AAAGACATTTAACAAAAAGTAATATTCTCAAATGAATTGTAATAT-TCTTTAACAAAAAGTAAAACA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1183487 52 - 7082604 ---------------AAAAGTAATATTCTCAAATGAGTTGTAATAT-TCTTTAACAAAAATTAAAACA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1276015 62 + 1864846 -AAAGACGTTTAACAAA----AATATTCTCAAATGAATTGTAACAT-TCTTTAACAAAAAGTAAAACA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 64961 66 + 287728 -AAAGACATTTAACAAAAAGTAATATTCTCAAATGAATTGTAATAT-TCTTTAACAAAAAGTAAAACA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 911544 38 + 5252280 TGAAGACACCCAAC----------ATTCCCAAATGCACCCT--------------------CAGAGGT i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1619387 57 + 4416731 taaagattcttaaaaataaa-----------AAGAACtaattatatatatatatataaCATTCAGACA i dasNov3.JH576208 I 213 C 0 e mm10.chr12 89956681 3538 - 120129022 I e colAng1.NW_012118821v1 1323179 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=3025733.000000 s hg38.chr2_KI270774v1_alt 59990 370 + 223625 ---ACAGAATGATGTTGTTTTAAAAGCTAAACAAATGTAAATAATTCTGGTAGTGAAAGGAAGACCAAATTCATATATC--TAAA---AA---AAGTA-AAATTCCCAAGGGCACTGGCAGGATAACAATGATATT----AAAA----------------ACCAGTGAAGACAGCTTTTGGTCAGGGCTTTACTT-------------------AAAAATTACTTTATATTTGGCAAAGACAAAATAGATAATATGGAATTTGGC-TAGGGAAAAGGATGTATAT-----TTTATTGGCTCCCACTGGTGA-ATTTACACCAGAGTCAGAGCTCGGCCACTTAAATAATATTTAATTTT-----TGTGATAAAAA--------TGTTTTCTCCCTTAATAAACTGTTCCTTTAAAACTGGAATTCAAAGTAAATGCAAAGC s panTro5.chr2A 1337270 365 + 111504155 ---ACAGAATGATGATGTTTTAAAAGCTAAACAAATGTAAATAATTCTGGTAGTGAAAGGAAGACCAAATTCATATATC--TAAA---AA---AAGTA-AAATTTCCAA-GGCACTGGCGGGATAACAGTGATATT----AAAA----------------ACCAGTGAAGACAGCTTTTGGTCAGGGCTTTACTT-------------------AAAAATTACTTTATATTTGGCAAAGACAAAATAGATAATATGGAATTTGGC-TAGGGAAAAGGATGTATAT-----TTTATTGGCTCCCACTGGTGA-ATTTACACCA----TAGAGCTCGGCCACTTAAATAATATTTAATTTT-----TGTGATAAAAA--------TGTTTTCTCCTTTAATAAACTGTTCCTTTAAAACTGGAATTCAAAGTAAATGGAAAGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1297726 365 + 114371477 ---ACAGAATGATGATGTTTTAAAAGCTAAACAAATGTAAATAATTCTGGTAGTGAAAGGAAGACCAAATTCATATATC--TAAA---AA---AAGTA-AATTTTCCAA-GGCACTGGCAGGATAACAGTGATATT----AAAA----------------ACCAGTGAAGACAGCTTTTGGTCAGGGCTTTACTT-------------------AAAAATTACTTTATATTTGGCAAAGACAAAATAGATAATATGGAATTTGGC-TAGGGAAAAGGATGTATAT-----TTTATTGGCTCCCACTGGTGA-ATTTACACCA----TAGAGCTCGGCCACTCAAATAATATTTAATTTT-----TGTGATAAAAA--------TGTTTTCTCCTTTAATAAACTGTTCCTTTAAAACTGGAATTCAAAGTAAATGGAAAGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1322619 369 + 1464242 ---ACAGAATGATGTTGTTTTAAAAGCTAAACAAATGTAAATAATTCTGGTAGTGAAAGGAAGACCAAATTCATATATC--TAAA---AA---AAGTA-AAATTCCCAAGGGCACTGGCAGGATAACAGTGATATT----AAAA----------------ACCAGTGAAGACAGCTTTTGGTCAGGGCTTTACTT-------------------AAAAATTACTTTATATTTGGCAAAGACAAAATAGATAGTATGGAATTTGGC-TAGGGAAAACGATGTGTAT-----TTTATTGGCTCCCACTGGTGA-ATTTACACCAGAGTCAGAGCTTGGCCACTTAAATAATATTTAATTTT-----TGTGAT-AAAA--------TGTTTTCTCCCTTAATAAACTGTTCCTTTAAAACTGGAATTCAAAGTAAATGCAAAGC i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1382926 370 + 108979918 ---ACAGGAGGATGTTGTTTTAAAAGCTAAACAAAAGTAAATAATTCTGATAGTGAAAAGAA----AAATTCATATATC--TAAA---AA---AGGTA-AAATTCCCAAGGGCACTGGCAGGACAACAGTGATACT----AAAA----------------ACCAATGAAGACAGCTTTTGGTCAGGGCTTTACTT-------------------AAAAATTACTTTATATTTGGCAAAGACAAAATAGATAATACAGTATTCGGC-TAGGGAAAAGGATGTGTAT-----TTTATCGGCTCCCACTGGTGA-ATTTACACCAGAGTAAGAGCTCAGCCATTTAAATAATATTTAACTTTTTGTGTGTGAT-AAAA--------TGTTTTCTCCCATAGTAAACTGTTCCTTTAAAACTGGAATTCAAAGTAAACGCAAAGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1355192 374 - 111193037 ---ACAGGAGGATGTTGTTTTAAAAGCTAAACAAAAGTAAATAATTCTGATAGTGAAAAGAAAACCAAATTCATATATC--TAAA---AA---AGGTA-AAATTCCCAAGGGCACTGGCAGGACAACAGTGATATT----AAAA----------------ACCAATGAAGACAGCTTTTGGTCAGGGCTTTACTT-------------------AAAAATTACTTTATATTTGGCAAAGACAAAATAGATAATACGGTATTCGGC-TAGGGAAAAGGATGTGTAT-----TTTATCGGTTCCCACTGGTGA-ATTTACACCAGAGTAAGAGCTCAGCCATTTAAATAATATTTAATTTTTTGTGTGTGAT-AAAA--------TGTTTTCTCCCATAGTAAACTGTTCCTTTAAAACTGGAATTCAAAGTAAATGCAAAGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1383432 374 + 3644372 ---ACAGGAGGATGTTGTTTTAAAAGCTAAACAAAAGTAAATAATTCTGATAGTGAAAAGAAAACCAAATTCATATATC--TAAA---AA---AGGTA-AAATTCCCAAGGGCACTGGCAGGACAACAGTGATATT----AAAA----------------ACCAATGAAGACAGCTTTTGGTCAGGGCTTTACTT-------------------AAAAATTACTTTATATTTGGCAAAGACAAAATAGATAATACGGTATTCGGC-TAGGGAAAAGGATGTGTAT-----TTTATCGGTTCCCACTGGTGA-ATTTACACCAGAGTAAGAGCTCAGCCATTTAAATAATATTTAATTTTTTGTGTGTGAT-AAAA--------TGTTTTCTCCCATAGTAAACTGTTCCTTTAAAACTGGAATTCAAAGTAAATGCAAAGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1337130 374 - 10304083 ---ACAGGAGGATGTTGTTTTAAAAGCTAAACAAAAGTAAATAATTCTGATAGTGAAAAGAAAACCAAATTCATGTATC--TAAA---AA---AAGTA-AAATTCCCAAGGGCACTGGCAGGACAACAGTGATATT----AAAA----------------ACCAATGAAGACAGCTTTTGGTCAGGGCTTTACTT-------------------AAAAATTACTTTATATTTGGCAAAGACAAAATAGATAATACGGAATTCGGC-TAGGGAAAAGGATGTGTAT-----TTTATCGGTTCCCACTGGTGA-ATTTACACCAGAGTAAGAGCTCAGCCATTTAAATAATATTTAATTTTTTGTGTGTGAT-AAAA--------TGTTTTCTCCCATAGTAAACTGTTCCTTTAAAACTGGAATTCAAAGTAAATGCAAAGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1409011 374 - 107702431 ---ACAGGAGGATGTTGTTTTAAAAGCTAAACAAAAGTAAATAATTCTGATAGTGAAAAGAAAACCAAATTCATATATC--TAAA---AA---AGGTA-AAATTCCCAAGGGCACTGGCAGGACAACAGTGATATT----AAAA----------------ACCAATGAAGACAGCTTTTGGTCAGGGCTTTACTT-------------------AAAAATTACTTTATATTTGGCAAAGACAAAATAGATAATACGGAAGTCGGC-TAGGGAAAAGGATGTGTAT-----TTTATTGGTTCCCACTGGTGA-ATTTACACCAGAGTAAGAGCTCAGCCATTTAAATAGTATTTAATTTTTTGTGTGTGAT-AAAA--------TGTTTTCTCCCATAGTAAACTGTTCCTTTAAAACTGGAATTCAAAGTAAATGCAAAGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 885838 374 - 2200435 ---ACAGGAGGATGTTGTTTTAAAAGCTAAACAAAAGTAAAGAATTCTGATAGTGAAAAGAAAACCAAATTCATATATC--TAAA---AA---AGGTA-AAATTCCCAAGGGCACTGGCAGGACAACAGTGATATT----AAAA----------------ACCAATGAAGACAGCTTTTGGTCAGGGCTTTACTT-------------------AAAAATTACTTTATATTTGGCAAAGACAAAATAGATAATATGGTATTCGGC-TAGGGAAAAGGATGTGTAT-----TTTATCGGTTCCCACTGGTGA-ATTTACACCAGAGTAAGAGCTCAGCCATTTAAATAATATTTAATTTTTTGTGTGTGAT-AAAA--------TGTTTTCTCCCATAGTAAACTGTTCCTTTAAAACTGGAATTCAAAGTAAATGCAAAGC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1332004 372 - 108792865 ---ACAGAATGCTGTTGTTTTAAAAGCTAAATAAATGTGAATAATTCTGGTAGTGAAAGGAAAACCAAATTCATGTATC-TAAAA---AA---AGGTA-AAATTTCCAAGGGCACTGGCAGGATAACACTGATATT----AAAA-----------------CCGGTGAAGCCAGCTTCT-GCCAGGGCTTCACTT---------------TTTAAAAAATTACTTTCTATTTGGCAAAGACAAAATAGATAATGCAAAATTTGGC-TAGGGAAGAGGATGTATAT-----TTTATCGGTTCCCACTGGTAA-GTTTACAGCAGAGTAAGAGCTCAGCCATTTAAATAATGTGTTATTTC-----TCTGAG-AAAT--------TGTTTCCTCCCATAATAAACTGTTCCTTTACAACTGGAATTCAAAGTAACTGCAAAGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1183539 374 - 7082604 ---ATAGAATGCTTTCGTTTTAAAAGCTAAATAAATGTGAATAATTCCGGTAGTAAAAGGAAAACCAAATTCATGTATC-TAAAA---AA---AAGTA-AAATTTCCAAGGTCACTGGCAGAATAACACTGATATT----AAAA-------------------GAAGAAGACAGCTTTT-GCCAGGGCTTCACTT----------AAAAAAAAAAAAAAAAACTTTCTATTTGGCAAAGACAAAATAGATAATGCAAAATTCGGC-TAGGGAAAAGGATGTGTAT-----TTCATTGGGTCCCACTGGTAA-ATTTACACCAGAGTAAGAGCTCGGCCATTTAAATAATGTTTTATTTC-----TGTGAT-AAAA--------TGTTTCCTCCCATAATAAACTGTTCCTTTAAAACTGGAATTCAAAGTAAATGC-AAGC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1276077 373 + 1864846 ---ACAGAATGCTGTTGTTTTAAAAGCTAAATAAATGTGAATAATTCTGGTAGTGAAAGGAAAACCAAATTCATATATCTTTAAA---AA---AAGTA-AAATTTCCAAGGGCACTGGCAGGATAACACTGATATT----AAAA-----------------CCAGTGAAGACAGCTTTT-GCCAGGGCTTTGCTT---------------TTTTAAAAATTACTTTCTATTTGGCAAAGACAAAATAGATAATACAAAATTTGGC-TAGGGAAAAGGATGTATAT-----TTTATTGGTTCCCAGTGGTAA-ATTTACACCAGAGTAAGAGCTCAGCCATTTAAATAATGTTTTATTTC-----TGTGAG-AAAA--------TGTTTCCTCCCATAATAAACTGTTCCTTTAAAACTGGAATTCAAAGTAAATGCAAAGC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 65027 351 + 287728 ---ACAGAATGCTGTTGTTTTAAAAGCTAAATAAATGTGAATAATTCTGGTAGTGAAAGGAAAACCAAATTCATGTATCTAAAAA---AA---AAGTA-AAATTTCCAAGGGCACTGGCAGGATAACACTGATATT----AAAA-----------------CCAGTGAAGACAGCTTTT-GCCAGGGCTTCACTT---------------TTTAAAAAATTACTTCCTATTTGGCAAAGACAAAATGGATAATGCAAAATTTGGC-T-----AAAGGATGTGTAT-----TTTATTGGTTCCCATT------------------GTAAGAGCTCAGCCATTTAAATAATGTTTCATTTC-----TGTGAG-AAAA--------TGTTTCCTCCCATAATAAACTGTTCCTTTAAAACTGGAATTCAAAGTAAATGCAAAGC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 911582 377 + 5252280 ---GCTGGAGG--------CCAAAAGCTGAACGAACTTAGACGGCTCTGACAGTCAAAGAAAAAACAAATTTTTATTCT--TAAA---AATGTAGGTATATTTTTCCAATGATTTTGGCAGCACGACAGCAGTATTGGGAAAAA----------------AATAGTGGAAACAGCTTTTAGTGAGACCTTTACTaaaaaaaaaaaaaaaaaaaaaaagaagaaGTTACATTTGGCAATGACAAAGCAGCTAAGACAGAAGTTGGT-TGGAA------------AT-----TTCACTGGTGCCTAACAGTGA-ACTGACAGCAGAAGAAAAGCCAAGGAATTTAAATCATATGTATTTAT-----TGTGAG-AAAAAT------TTTTCTCTCCTACAATAAGCTGTTCCTTTA-ATCTGGGATTTAAAGTAAGTGGAAAGT i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89960219 395 - 120129022 ---ACAGAACAGCATCATTCTAAAAACTGAAGAAACTTAACTGGTTCTGAAAGTGAGTGTAAAGCCAAATTCATATCTC--TAAATTTAA---AAATA-AATCCCCCAACAGCCTTGGCAGTATGACAGCAGTATG----AAAAGAACAGAGCACGGGGAGGCAGTGGAGACAGCTTTA-GTGAACACTTGACTT---------------CaaaaaaatatattttatatttGGAAGTGGCAAAATAAATTCCACAGGATTTTGG-CTGAGTGAAGGATGGATAT-----TTTATTGGTTCCTACCTCTTACATTTCCACCAGAGTAGCAGCTAGAAAACTTAAACAACATATATTTACCAC--CAAGAA-AAAA--------ATGTTTCTCTTGCAATAAATTGTTCATTTAAAACTGGGATCTGGAGCAAATTTGAGGC i mm10.chr12 I 3538 I 2038 s dasNov3.JH576208 1619444 363 + 4416731 TCAGCTTAATGGTATTGCTTTTCAAACTGATTAAATTTAAATGACTCTGGCGGTGATCGGAAAACCAAATTCATATTTC--TAAA---AA---------AATTTCACAAGGACTTTGGCAGCATGACAGTAGTATA----AAAA------------------CAGTGAA---AACCTTTAGTGAGTGCTTT-CCT-------------------AAAAACTATTTCATATTTTGGCATGATAAAATAGATAAAAAAGGTTTTGGAGTGGGGAGCAAGATATGTATATATATGTGTGTGTAACTAATAATAA-ATT-ATGCCAGAGTAGGAGAGAAGAAATTTAAATAATGTATATTTAC-----CTTAAG-GAAAATATTTTCTATTTTCTTCTATAATAAAATGTTCCTTTAAAGTTGGAATTCATAGC----------- i dasNov3.JH576208 C 0 C 0 e colAng1.NW_012118821v1 1323179 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=2662023.000000 s hg38.chr2_KI270774v1_alt 60360 365 + 223625 AGAAAGAAGCTCCACAGTGT---GTCCTTCGGGTAAACCAGTCTTCCTG-CTGCCTTTAGATCAGCACCTCTGGTTATTTTTCAGCTTGACTTACAC----------------------------------AGAAGAAAGT-CGTATGCATTGGAATACGGTCT-TTCTCTCACGGA-------------------TT--ATTCTGGTAGATTTCAAAAGCCCTACAAGGATAATACA-GGGAGCCATGGC-CCTTTTGTGATTGCT-GTCACAGTTTTATGAAAGGCATTTTCAAAAGTTAGCCTCGAGGAGATTCTGGAGATTTCTGTGCTCTCAGGAAA--CCCTTAC------CTCGCCGTGGCTCAGAAGCAGAAGTGAGGAGC-----------------------------CAGGCT-----------------------------TCTCTGTTTATGGAGAGGAATTTTCTGCACCTTCACAAGAGC s panTro5.chr2A 1337635 365 + 111504155 AGAAAGAAGCTCCACAGTGT---GTCCTTCGGGTAAACCAGTCTTCCTG-CTGCCTTTAGATCAGCACCTCTGGTTATTTTTCAGCTTGACTTACAC----------------------------------AGAAGAAAGT-CGTATGCATTGGAATACGGTCT-TTCTCTCACGGA-------------------TT--ATTCTGGTAGATTTCAAAAGCCCTACAAGGATAATACA-GGGAGCCATGGC-CCTTTTGTGATTGCT-GTCACAGTTTTATGAAAGGCATTTTCAAAAGTTAGCCTTGAGGAGATTCTGGAGATTTCTGTGCTCCCAGGAAA--CCCTTAC------CTCGCCGTGGCTCAGAAGCAGAAGTGAGGAGC-----------------------------CAGGCT-----------------------------TCTCTGTTTATGGAGAGGAATTTTCTGCACCTTCACAAAAGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1298091 365 + 114371477 AGAAAGAAGCTCCACAGTGT---GTCCTTCGGGTAAACCAGTCTTCCTG-CTGCCTTTAGATCAGCACCTCTGGTTATTTTTCAGCTTGACTTACAC----------------------------------AGAAGAAAGT-CGTATGCATTGGAATACGGTCT-TTCTCTCACGGA-------------------TT--ATTCTGGTAGATTTCAAAAGCCCTACAAGGATAATACA-GGGAGCCATGGC-CCTTTTGTGATTGCT-GTCACAGTTTTATGAAAGGCATTTTCAAAAGTTAGCCTTGAGGAGATTCTGGAGATTTCTGTGCTCCTAGGAAA--CCCTTAC------CTCGCCGTGGCTCAGAAGCAGAAGTGAGGAGC-----------------------------CAGGCT-----------------------------TCTCTGTTTATGGAGAGGAATTTTCTGCACCTTCACAAAAGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1322988 365 + 1464242 AGAAAGAAGCTCCACAGTGT---GTCCGTCGGGTAAACCAGACTTCCTG-CTGCCTTTAGATCAGCACCTCTGGTTATTTTTCAGCTTGACTTACAC----------------------------------AGAAGAAAGT-CGTATGCATTGGAATACGGTCT-TTCTCTCACGGA-------------------TT--ATTCTGGTAGATTTCAAAAGCCCTACAGGGATAATACA-GGGAGCCGTGGC-CCTTTTGTGATTGTT-GTCACAGTTTTATGAAAGGCATTTTCAAAAGTTAGCCTCGAGGAGATTCTGGAGATTTCTGTGCTCTCAGGAAA--CCCTTAC------CTCGCCGTGGCTCAGAAGCAGAAGTGAGGAGC-----------------------------CAGCCT-----------------------------TCTCTGTTTATGGAGAGGAATTTTCTGCACCTTCACAAGAGC i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1383296 364 + 108979918 AGAAAGTAGCTCCACAGTGC---GCCCTTCGGGTAAACCGGTCCTCCTG-CTGCCTTTAGATCAGCGCCTCTGGTTATTTTTCAGCCTGACTTACACA------------------------------CAAAGAAGAAAGC-CGTATGCATTGGAATAGAGTCT-CTCTCTCACAGA-------------------TT--ATTCTGGTAGATTTCAGAAACCCTACAAGAGTAATACG-GGGAGCCATGGCTCTTTTTGTGATGGCT-GTCACAGTTTTATGAAAGACATTTTCAAAAGTTAGCCTCAAGGAGATTCTGGAGATTTCTGTGCTCTCAGGAAA--------C------CTTGCCACGGCTCAGAAGCAGAAGTGAGCGGC-----------------------------CAGCCT-----------------------------TGTCCACTTATGGAGAGGAATTTTCTGCACCTTCACAAGAGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1355566 364 - 111193037 AGAAAGTAGCTCCACAGTGC---GCCCTTCGGGTAAACTGGTCCTCCTG-CTGCCTTTAGATCAGCGCCTCAGGTTATTTTTCAGCCTGACTTACACA------------------------------CAAAGAAGAAAGC-CGTATGCATTGGAATAGAGTCT-CTCTCTCACGGA-------------------TT--ATTCTGGTAGATTTCAGAAACCCTACAAGAGTAATACG-GGGAGCCATGGCTCTTTTTGTGATGGCT-GTCACAGTTTTATGAAAGACATTTTCAAAAGTTAGCCTCAAGGAGATTCTGGAGATTTCTGTGCTCTCAGGAAA--------C------CTTGCCACGGCTCAGAAGCAGAAGTGAGCGGC-----------------------------CAGCCT-----------------------------TGTCCACTTATGGAGAGGAATTTTCTGCACCTTCACAAGAGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1383806 364 + 3644372 AGAAAGTAGCTCCACAGTGC---GCCCTTCGGGTAAACCGGTCCTCCTG-CTGCCTTTAGATCAGCACCTCAGGTTATTTTTCAGCCTGACTTACACA------------------------------CAAAGAAGAAAGC-CGTATGCATTGGAATAGAGTCT-CTCTCTCACGGA-------------------TT--ATTCTGGTAGATTTCAGAAACCCTACAAGAGTAATACG-GGGAGCCATGGCTCTTTTTGTGATGGCT-GTCACAGTTTTATGAAAGACATTTTCAAAAGTTAGCCTCAAGGAGATTCTGGAGATTTCTGTGCTCTCAGGAAA--------C------CTTGCCACGGCTCAGAAGCAGAAGTGAGCGGC-----------------------------CAGCCT-----------------------------TGTCCACTTATGGAGAGGAATTTTCTGCACCTTCACAAGAGC i macNem1.NW_012011978v1 C 0 I 956 s cerAty1.NW_012000820v1 1337504 369 - 10304083 AGAAAGTAGCTCCACAGTGT---GCCCTTCGGGTAAACCGGTCCTCCTG-CTGCCTTTAGATCAGCGCCTCTGGTTATTTTTCAGCTCGACTTACACA------------------------------CAAAGAAGAAAGC-CGTATGCATTGGAATAGAGTCT-CTCTCTCAC-GA-------------------TT--ATTCTGGTAGATTTCAGAAACCCTACAAGAGTAATACG-GGGAGCCATGGCTCTTTTTGTGATTGCT-GTCACAGTTTTATGAAAGACATTTTCAAAAGTTAGCCTCAAGGAGATTGTGGAGATTTCTGTGCTCTCAGGAAA--CCCTTCC------CTTGCCACGGCTCAGAAGCAGAAGTGAGCGGC-----------------------------CAGCCT-----------------------------TGTCCACTTATGGAGAGGAATTTTCTGCACCTTCACAAGAGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1409385 370 - 107702431 AGAAAGAAGCTCCACAGTGC---GTCCCTCAGGTAAACCAGTCCTCCTG-CTGCCTTTAGATCAGCGCCTCTGGTTATTTTTCAGCTTTACTTACACA------------------------------CAAAGAAGAAAGC-CATATGCATTGGAATAGAGTCT-CTCTCTCACGGA-------------------TT--ATTCTGGTAGATTTCAGAAACCCTACAAGAGTAATACG-GGGAGCCATGGCTCTTTTTGTGATTGCT-GTCACAGTTTTATGAAAGACATTTTCAAAAGTTAGCCTCAAGGAGATTCTGGAGATTTCTGTGCTCTCAGGAAA--------CCCTTCTCTTGCCACGGCTCAGAAGCAGAAGTGAGGGGC-----------------------------CAGCCT-----------------------------TGTCCACTTATGGAGAGGAATTTTCTGCATCTTCACAAGAGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 886212 363 - 2200435 GGAAAGAAGCTCCACAGTGC---GCCCTTCGGGTAAACCGGTCCTCCTG-CTGCCTTTAGATCAGCGCCTCTGGTTATTTTTCAGCTTGACTTACACA------------------------------CAAAGAAGAAAGC-CGTATGCATTGGAATAGAGTCT-CTCTCTCAC-GA-------------------TT--ATTCTGGTAGATTTCAGAAACCCTACAAGAGTAATACG-GGGAGCCATGGCTCTTTTTGTGATTGCT-GTCACAGTTTTACGAAAGACATTTTCAAAAGTTAGCCTCAAGGAGATTCTGGAGATTTCTGTGCTCTCAGGAAA--------C------CTTGCCACGGCTCAGAAGCAGAAGTGAGCGAC-----------------------------CAGCCT-----------------------------TGTCCACTTATGGAGAGGAATTTTCTGCACCTTCACAAGAGC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1332376 360 - 108792865 AGAAAGAAGCCCCACAGT-----GTCCTTTGGGCAAACGTGTGTTCCTG-CCTCCTTCCCCCTGGCACCTCCGGTTATGTTTTAGCTCAACTTACAG----------------------------------AGAAAAACGC-TGTGTGCATTGGAACACCGTCT-TTCTCTCACGGA-------------------TT--ATTCTGGTACATTTCAAAGGCCCTACAAGAGTAATGCG-GGGAACCACGGCTCTTCTTGTGATTGCC--TGTCAGTTTTATGAAAGGCATTTTCGAAAGTCAGCCTCAAGGAGATTCTGGAGATTTCTGTGCTCTAAGGAAA---CCTTCC------CTCGGTGCGGCTCAGAAGCAGAAGTGAGAGCC-----------------------------CAGCC------------------------------TTTCTGTTAATGGAGAGGAA-TTTCTGCACCTTCGCCAGAGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1183913 351 - 7082604 AGAAAGAAGCCCCACAGT-----GTCCTTTGGGCAAACGTGTGTTCCTG-CCTCCTTCCACCGGGCACCTCTGGTTATGTTTTAGCCTGACTTACAG----------------------------------AGAAAAACAC----------TGGGACACAGTCT-TCCTCTCACGGA-------------------TT--ATTCTGGTAGGTTTCAAAGGCTCTACAAGAGTAATAC--GGGAAGCATGGCTCTTTGTGTGATTGCC--TGTCAGTTTTATGAAAGGCGTTTTCAAGAGTCAGCCTTAAGGAGATTCTGGAGATTT-TGTGCTCTAAGGAAA--CCCTTCC------CTCGTTGCGGCTCAGGGGCAGAAGTGAGAGTC-----------------------------CAGCCT-----------------------------TTTCTGTTAATGAAGAGGAA-TTTCTGTACCTTCTCCAGAGC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1276450 360 + 1864846 AGAAAGAAGCCCCACAGT-----GTCCTTTGGGCAAACATGTGTTCCTG-CCTCCTTCCACCTGGCACCTCTGGTTACGTTTTAGCTTCACTTACAG----------------------------------AGAAAAACGC-TCTATGCACTGGAACACAGTCT-TTCTCTCACGGA-------------------TT--ATTCTGGTAGATTTCAAAAGCCCTACAAGAGTAATAT--GGGAACCACGGCTCTTTTTGTGATTGCC--TGCCAGTTTTATGAAAGGCATTTTCAAAAGTCAGCCTCAAGGAGATTCTGGAGATTTCTGTGCTCTAAGGAAC---CCTTCC------ATCGGTGCGGCTCAGAAGCAGAAGTGAGAGCC-----------------------------CAGCCT-----------------------------TTTCTGTTAATGGAGAGGAA-TTTTTGCACCTTCGCCAGAGC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 65378 357 + 287728 AGAAAGAAGCCCCGCAGT-----GTCCTGTGGGCAAACGTG---TCCTG-CCTCCTTCCACCCGGCACCTCTGGTTATGTTTAAGCTTGACTTACAG----------------------------------AGAAAAACGC-TGTGTGCATCGGAACA--GTCT-TTCTCTCATGGA-------------------TT--ATTCTGGTAGATTTCAAAGGCCCTACAAGAGTAATTCG-GGGAACCACGGCTCTTTTTGTGATTGCC--TGTCAGTTTTATGAAAGGCATTTTCAAAAGTCAGCCTCAAGGAGATTCTGGAGATTTCTGTGCTCTAAGGAAA--CCCTTCC------CTTGGTGTGGCTCAGAAGCAGAAGTGAGAGCC-----------------------------CAGGCT-----------------------------TTTCTGTTAAGGGAGAGGAA-TTTCTGCACCTTCGCCAGAGC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 911959 431 + 5252280 -GAAGGGAACATCACAGTGTTGGGCCC----AGTAAACCGACCCTCTGG-CTCTCCCGAGACGGGCATCTCAAGCTATTTTTGAGCTTGACTTACGAAGAAAGCTTTTTTGTTAGGAAGAAGCTTTCTTAAAGAAGAAAGCTCACCTGAGCCGGAACACAGTCT-TTTTCTCATTTT-------------------TTTCTTTTTGATAGATTTCATGAGCCCGACAAGAATAATATGTGAGGCCCGCGGTTCCTTTTGTGATTACCTGTCATGGTTTTATGAAAGGCGTTTTCAAAAGTCAGCTTCAAGGTGATTGTGGAGATTT-TGTGCTTCTAAGCAA--AATCCTC------CCTGCTGAGTCTCAGAAGCAGAAATGAGAGGCTGCCGGGATGGCGCTGTGGAAAAGTCATGCGGCCT-----------------------------TGACATTTTATGAGTAGGGATTTTCTCTGCCTTCCCAGGAGC i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1619807 425 + 4416731 AAAAAGAATACCTGAAATAT---TTCCTTTGGGTAAACCAATAATCCTGTTTTCCTTTAGATAGCTATCTCTGGTTATCTTTAACCTTAGCATATAT-----------------------------GTAAATTGAAAAACC-TACCTGCATTGGAATGCAGTCTCTTTTCTCatatatatatatatatattttttttt--tcttttataGCTTTCATGGGCCCTACAAGAATAATATGTAGGAACCACAGTTCTTTCTGTGATTACCTGTCATGGTTTTATGAAAGGCATTTTCAAAAGTCAACTTCAAGGTGATACAGGGGATTTTAATGCTTCTAAGCAAAATCCTTCC------CTTACTGAGGTTCAGAAGCAGAAATGAGAGGT-----------------------------TAGCTTGATGGCATTATAGGAATGTCACATGGTCATCTTCCTTCATGAATTGGGATTTTCTGTGTCTTTGCAAGGAC i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89960614 2038 - 120129022 I e colAng1.NW_012118821v1 1323179 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=1018069.000000 s hg38.chr2_KI270774v1_alt 60725 199 + 223625 TCAAAATGAACCCAGACAGAGTCTTTG-AAGGAC-AAGGGCAGGACCCAGGGACCAGGCTGTGAGTCTGCCCTGCCTGGCTGCTTTCGGATCCTGTGTCCTCAGAACCCACCAAATTCATGTCGGTCTTGTCCTCACAG---GTTCTCCTGGCCCTG-----GGTGAGTCACGCTGGGAGAGTTAGCAC-------------AGGTG--GGGAAATGCAGGCCA-------- s panTro5.chr2A 1338000 199 + 111504155 TCAAAATGAATCCAGACAGAGTCTTTG-AAGGAC-AAGGGCAGGACCCAGGGACCAGGCTGTGACTCTGCCCTGCCTGGCTGCTTTCGGATCCTGTGTCCTCAGAACCCACCAAATTCATGTCGGTCTTGTCCTCACAG---GTTCTCCTGGCCCTG-----GGTGAGTCACGCTGGGAGAGTTAGCAC-------------AGGTG--GGGAAATGCAGGCCA-------- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1298456 199 + 114371477 TCAAAATGAATCCAGACAGAGTCTTTG-AAGGAC-AAGGGCAGGACCCAGGGACCAGGCTGTGACTCTGCCCTGCCTGGCTGCTTTCGGATCCTGTGTCCTCAGAACCCACCAAATTCATGTCGGTCTTGTCCTCACAG---GTTCTCCTGGCCCTG-----GGTGAGTCACGCTGGGAGAGTTAGCAC-------------AGGTG--GGGAAATGCAGGCCA-------- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1323353 200 + 1464242 TCAAAATGAACCCAGACAGAGTCTTTGAAAGGAC-AAGGGCAGGACCCAGGGACCAGGCTGTGACTCTGCCCTGCCTGGCTGCTTTCGGATCCTGTGTCCTCAGAACCCACCAAATTCATGTCAGTCTTGTCCTCACAG---GTTCTCCTGGCCCTG-----GGTGAGTCACGCTGGGAGAGTTAGCAC-------------AGGTG--GGGAAATGCAGGCCA-------- i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1383660 201 + 108979918 TCAAAATGAACCCAGACAGAGTCTTTGAAAGGACAAAGGGCAGGGCCCAGGAACCGGGCTGTGACTCTGCCCTGCCTCTCTGCTTTCGGATCCTGTGACCTCAGAACCCACCAAAGTCACGTCGGTCTTGTCGCCACAG---GTTCTCCTGGCCCTG-----GGTGAGCCACGCTGGGAGAGTTAGCAC-------------CAGCA--GGGAAATGCAGGCCG-------- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1355930 201 - 111193037 TCAAAATGAACCCAGACAGAGTCTTTGAAAGGACAAAGGGCAGGGCCCAGGAACCGGGCTGTGACTCTGCCCTGCCTCTCTGCTTTCGGATCCTGTGTCCTCAGAACCCACCAAAGTCACGTCGGTCTTGTCGCCACAG---GTTCTCCTGGCCCTG-----GGTGAGCCACGCTGGGAGAGTTAGCAC-------------CAGCA--GGGAAATGCAGGCCG-------- i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1337873 200 - 10304083 TCAAAATGAACCCAGACAGAGTATTTGAAAGGAC-AAGGGCAGGGCCCAGGAACCGGGCTGTGACTCTGCCCTGCCTCTCTGCTTTCGGATCCTGTGTCCTCAGAACCCACCAAAGTCACGTCGGTCTTGTCCCCACAG---GTTCTCCTGGCCCTG-----GGTGAGCCACGCTGGTAGAGTTAGCAC-------------TAGCG--GGGAAATGCAGGCCA-------- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1409755 200 - 107702431 TCAAAATGAACCCGGACAGAGTCTTTGAAAGGAC-AAGGGCAGGGCCCAGGAACCGGGCTGTGACTCTGCCCTGCCTCTCTGCTTTCGAATCTTGTGTCCTCAGAACCCACCAAAGTCACGTCGGTCTTGTCCCCACAG---GTTCTCCTGGCCCTG-----GGTGAGCCACGCTGGGAGAGTTAGCAC-------------CAGTG--GGGAAATGCAGGCCG-------- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 886575 199 - 2200435 TCAAAATGAACCCAGACAGAGTATTTGAAAGGAC-AA-GGCAGGGCCCAGGAACCGGGCTGTGACTCTGCCCTGCCTCTCTGCTTTCGGATCCTGTGTCCTCAGAACCCACCAAAGTCACGTCGGTGTTGTCCCCACAG---GTTCTCCTGGCCCTG-----GGTGAGCCACGCTGGTAGAGTTAGCAC-------------CAGCG--GGGAAATGCAGGCCG-------- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1332736 198 - 108792865 TCATGATGAACCCAGACAGA--CTCTGAAAGGTC-AAGGCCGGGGCCCAGGAACCGGGATGTGACTCTGCCCTGCCTTGC-GCTTTCAAATCCAGTGTCCTCAGAACCGACCACATTCACGTCAGCTTTGCCCTT--------------CGGGCCTG-----GGTGAGCCACGCTGGGAGACTTAGCACAGGtgcaggg---aagtgcagggaaatgcagggaa-------- i calJac3.chr14 C 0 I 10 s saiBol1.JH378218 1184264 168 - 7082604 TCACAATGAATCCACACAGA--CTGTGAAAGGAC-AAGGTC-TGGCCCGGGAACCGGGCTGTGACTCTGCCCTGCCTTGCTGCTTTTGAATCCAGTGTCCTCAGAACCGACCAAATTCACGTCAGCTTTGCCCTG----------------------------------------------------ACAGGTTCTCGGACCAGGTGCAGGGAAGTGCAGGGAA-------- i saiBol1.JH378218 C 0 I 10 s cebCap1.NW_016107827v1 1276810 195 + 1864846 TCACGATGAATCCACACAGA--C--TGAAAGGAC-AAGGCT-GGGCCCGGGAACCAGGCTGTGACTCTGCCCTGCCTTGCTGCTTTCGAATCCAGTGTCCTCAGAGCTGACCAAATTCACGTCAGCTTTGCCCTAACAG---GTTCT--CAGGCCTG-----GGTGAGCCATGCTGGGAGAGTTAGCAC-------------AGGTGCAGGGAAGTGCAGGGAA-------- i cebCap1.NW_016107827v1 C 0 I 105 s aotNan1.NW_018513311v1 65735 192 + 287728 TCACGATGAACC----CAGA--CTGTGGAAGGAC-AAGGCC-GGGCCCGGGAACCGGGCTGTGACTCTGCCCTGCCTTGCTGCTTTCGAATCCAGTGTCCTCAGAACCGACCAAAGTCACGTCAGCTTCACCCTGACAG---GTTCT--CAGGCCTG-----GGTGAGCCACGCTGGGAGAGTTAGCGC-------------AGGTGC-GGGAAGTGCAGGGAA-------- i aotNan1.NW_018513311v1 C 0 I 10 s otoGar3.GL873658 912390 140 + 5252280 -----------------------------------------------------CCAAAATG-------AACTTGTCTTGCTGGTGCTGGATCCTGTGTCCTCTGAACTGGACAGGTTCCCGTCAGCTTGGCCTC---------TTGCCCTGGTCCCTACCCCAACAAGCAGTGCTTGGAAGGTTGGTCC-------------AACCG--TGGAAGTAAAAACAC-------- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1620232 206 + 4416731 TCAAAATGAATGGAGAAAGATTTTCTCAAAGGAC-ATGTCCAAGCCAAAGGAGCTAGGCCATGGCTCTGCACTGT-----TGATTTCAGACTCTATGTCCTCATCATTGATTAAATTAATGTCAACTTATCTACCAAAGCCTTTTTTTTCTACCCTA-----GAAGAATAAGTTACAGAAAGCTAACAC-------------AATTA--TGGAAATGAAAACATTTAGTCCA i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89960614 2038 - 120129022 I e colAng1.NW_012118821v1 1323179 0 - 13651311 C e macNem1.NW_012011978v1 1384170 956 + 3644372 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=115993.000000 s hg38.chr2_KI270774v1_alt 60924 20 + 223625 GCGGCTGGCAGGGTGAGCTG----- s panTro5.chr2A 1338199 20 + 111504155 GCGGCCGGCAGGGTGAGCTG----- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1298655 20 + 114371477 GCGGCCGGCAGGGTGAGCTG----- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1323553 20 + 1464242 GCGGCCGGCAGGGTGAGCTG----- i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1383861 20 + 108979918 GCGGCCGGGAGGGTGAGCTA----- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1356131 20 - 111193037 GCGGCCGGGAGGGTGAGCTG----- i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1338073 20 - 10304083 GCAGCCGGGAGGGTGAGCTG----- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1409955 20 - 107702431 GCGGCCGGGAGGGTGAGCTG----- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 886774 20 - 2200435 GCAGCCGGGAGGGTGAGCTG----- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1332944 20 - 108792865 GTGGCCGGGAGGGTGAGCTG----- i calJac3.chr14 I 10 C 0 s saiBol1.JH378218 1184442 20 - 7082604 GCGGCCGGGAGGGTGAGCTG----- i saiBol1.JH378218 I 10 C 0 s aotNan1.NW_018513311v1 65937 20 + 287728 GCGGCCGGGAGGGTGAGCTG----- i aotNan1.NW_018513311v1 I 10 C 0 s otoGar3.GL873658 912530 19 + 5252280 AAAGCC-CCATGGTGAGCTG----- i otoGar3.GL873658 C 0 I 221 s dasNov3.JH576208 1620438 18 + 4416731 -------GAAGATCAAGCTGGACCA i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89960614 2038 - 120129022 I e cebCap1.NW_016107827v1 1277005 105 + 1864846 I e colAng1.NW_012118821v1 1323179 0 - 13651311 C e macNem1.NW_012011978v1 1384170 956 + 3644372 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=217702.000000 s hg38.chr2_KI270774v1_alt 60944 56 + 223625 ------CAGCCGCCCCTCTGTACCTGGTGCTATGTCTGCT--AGTGGATCTTCACCCAGGATG---------T- s panTro5.chr2A 1338219 56 + 111504155 ------CAGCCGCCCCTCTGTACCTGGTGCTATGTCTGCT--AGTGGATCTTCACCCAGGATG---------T- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1298675 56 + 114371477 ------CAGCCGCCCCTCTGTACCTGGTGCTATGTCTGCT--AGTGGATCTTCACCCAGGATG---------T- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1323573 56 + 1464242 ------CAGCCGCCCCTCTGTACTTGGTGCTGTGTCTGCT--AGTGGGTCTTCACCCAGGATG---------T- i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1383881 56 + 108979918 ------CAGCTGCCCCTCTGCACCCGGCGCTACGTCCACT--AGCGCGTCTTCACCCAAGAGG---------T- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1356151 56 - 111193037 ------CAGCTGCCCCTCTGCACCCGGCGCTACGTCCACT--AGCGCGTCTTCACCCAGGAGG---------T- i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1338093 56 - 10304083 ------TAGCTGCCCCTCTGCACCCGGCGCTACGTCCACT--AGCGCGTCTTCACCCAGGAGG---------T- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1409975 56 - 107702431 ------CAGCTGCCCCTCTGCACCCGGCGCTATGTCCACT--AGCACGTCTTCACCCAGGAGG---------T- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 886794 56 - 2200435 ------TAGCTGACCCTCTGCACCCGGCGCTACGTCCACT--AGCGCGTCTTCACCCATGAGG---------T- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1332964 56 - 108792865 ------CAGCTGCCCCTCTGCCCTCAGCGCTGTGTTCACC--AGCTGGATTTCACCCGGAGGG---------A- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1184462 64 - 7082604 ------CAGCTGCCCC-CTGCCCTCAGCACTGTGTCCACC--AGCCTGATTTCACCCAGGAAATTTCACCCCG- i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 65957 56 + 287728 ------CAGCTGCCCCTCTGCCCTCAGCGCTGTGTCCACC--AGCCCGATTTCACCTGGAGGG---------A- i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1620456 60 + 4416731 ATACTCTAGCTTTTCAGGTATTGCCAG-----TGTCCATTTAAGTGTATTTTTATTCAGTGAA---------TA i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89960614 2038 - 120129022 I e cebCap1.NW_016107827v1 1277005 105 + 1864846 I e otoGar3.GL873658 912549 221 + 5252280 I e colAng1.NW_012118821v1 1323179 0 - 13651311 C e macNem1.NW_012011978v1 1384170 956 + 3644372 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=448218.000000 s hg38.chr2_KI270774v1_alt 61000 66 + 223625 GCTTCCTCATTCTCGACTTCACCCCCA---GCTCCAGACTCAGAGTATGAAGAGCTTGAGTGGTTGCCt s panTro5.chr2A 1338275 66 + 111504155 GCTTCCTCATTCTCGACTTCACCCCCA---GCTCCAGACTCAGAGTATGAAGAGCTTGAGTGGTTGCCt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1298731 66 + 114371477 GCTTCCTCATTCTCGACTTCACCCCCA---GCTCCAGACTCAGAGTATGAAGAGCTTGAGTGGTTGCCt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1323629 66 + 1464242 GCTTCCTCATTCTCGACTTCACCCCCA---GCTCCAGACTCAGAGTATGAAGAACTTGAGTGGTTGCCt i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1383937 66 + 108979918 ATTTCCTCATTCTCGACTTCACCCCCA---GCTCCAGACTCAGAGTATGAAGAACTCGAGTGGTTGCCt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1356207 66 - 111193037 ACTTCCTCATTCTCGACTTCACCCCCA---GCTCCAGACTCAGAGTATGAAGAACTCGAGTGGTTGCCt i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1338149 66 - 10304083 ACTTCTTCATTCTCGACTTTACCCCCA---GCTCCAGACTCAGAGTATGAAGAACTCGAGTGGTTGCCt i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1410031 66 - 107702431 ACTTCCTCATTCTCGACTTCACCCCCA---GCTCCAGACTCAGAGTATGAAGAACTCGAGTGGTTGCCt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 886850 66 - 2200435 ACTTCCTCATTCTCGACTTCACCCCCA---GCTCCAGACTCAGAGTATGAAGAACTCGAGTGGTTGCCt i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1333020 63 - 108792865 GATTCCTCATTCTTGACTCCA-CCCCA---GCTCCAGACTC--AGTATGAAGAACTTGAGTGGTCGCCt i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1184526 65 - 7082604 ATTTCCTCATTCTTGACTCCA-CCCCA---GCTCCAGACTCAGAGTATGAAGAAGTTGAGTGGTTCCCt i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1277110 65 + 1864846 ATTTCCTCATTCTTGACTCCA-CCCCA---GCTCCCGACTCAGAGTATGAGGAACTTGAGTGGTTGCCt i cebCap1.NW_016107827v1 I 105 C 0 s aotNan1.NW_018513311v1 66013 65 + 287728 GCTTCCTCATTCTTGACTCCA-CCCCA---GCTCCAGACTCAGAGTATGAAGAACTTGAGTGGTTGCCt i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1620516 69 + 4416731 ATTTAAGTGTTCTTGACTTCTGCTCTACATATTTCAAACTCAGGATATATTGAATTTGAGTGGTTGTCT i dasNov3.JH576208 C 0 I 1512 e mm10.chr12 89960614 2038 - 120129022 I e otoGar3.GL873658 912549 221 + 5252280 I e colAng1.NW_012118821v1 1323179 0 - 13651311 C e macNem1.NW_012011978v1 1384170 956 + 3644372 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=399952.000000 s hg38.chr2_KI270774v1_alt 61066 63 + 223625 gacatggtttcactgtgtccccacccaaatctcatcttgaattgtagctcccataatttccac s panTro5.chr2A 1338341 63 + 111504155 gacatggtttcactgtgtccccacccaaatctcatcttgaattgtagctcccataatttccac i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1298797 63 + 114371477 gacatggtttcactgtgtccccacccaaatctcatcttgaattgtagctcccataatttccac i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1323695 63 + 1464242 gacatggtttcgctgtgtccccatccaaatctcatcttgaattgtagctcccataatttccac i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1384003 63 + 108979918 gacatggtttggctgtgtccccacccaaatctcatcttgaattggagctcccataattcccat i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1356273 63 - 111193037 gacatggtttggctgtgtccccacccaaatctcatcttgaattggagctcccataattcccat i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1338215 63 - 10304083 gacatggtgtggctgtgtccccacccaaatctcatctggaattggagctcccataattcccat i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1410097 63 - 107702431 gacatggtttggctgtgtccccacccaaatctcatcttgaattggagctcccataattcccat i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 886916 61 - 2200435 gacatggtttggctgtgt--ccacccaaatctcatcttgaattggagctcccataattcccat i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1333083 63 - 108792865 ggcatggtttggttgtgcccccacccaaatctcatctcgaattgtagctcccataattcccac i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1184591 63 - 7082604 ggcatggtttgtctgtgcccccacccaaatctcatcttgaattgtagctcccataattcccac i saiBol1.JH378218 C 0 M 1695 s cebCap1.NW_016107827v1 1277175 63 + 1864846 ggcatggtgtggctgtgccctcacccaaatctcctcttgaattgtagctcccataattcccgc i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 66078 63 + 287728 ggcatggtttgactgtgcccccacccaaatctcatcttgaattgtagctcccataattcctac i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89960614 2038 - 120129022 I e otoGar3.GL873658 912549 221 + 5252280 I e dasNov3.JH576208 1620585 1512 + 4416731 I e colAng1.NW_012118821v1 1323179 0 - 13651311 C e macNem1.NW_012011978v1 1384170 956 + 3644372 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=1143357.000000 s hg38.chr2_KI270774v1_alt 61129 241 + 223625 ttgtggtgggagggacctggtgggagataattgaatcatggggtggtttccccgatactgttctcatagcagttaataagtctcacaagatctgatggttttatcagggaaaccccgtttgcttggttctcattgtcgcttgtctgtggccatttaagacacggctttcaccttcctcagtgattgtgaggtctcccctgccatgtggaactgtgagttcgttaaacctctttttcttttt-- s panTro5.chr2A 1338404 241 + 111504155 ttgtggtgggagggacctggtgggagataattgaatcatggggtggtttccccgatactgttctcatagcagttaataagtctcacaagatctgatggtttaatcagggaaaccccgtttgcttggttctcattctcgcttgtctgtggccatttaagacatggctttcaccttccgcagtgattgtgaggtctcctctgccatgtggaactgtgagttcgttaaacctctttttcttttt-- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1298860 241 + 114371477 ttgtggtgggagggacctggtgggagataattgaatcatggggtggtttccccgatactgttctcatagcagttaataagtctcacaagatctgatggttttatcagggaaaccccgtttgcttggttctcattctcgcttgtctgtggccatttaagacacggctttcaccttccgcagtgattgtgaggtctcccctgccatgtggaactgtgagttcgttaaacctctttttcttttt-- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1323758 240 + 1464242 gtgtggtgggagggacctggtgggagataattgaatcat-gggtggtttccccgatactgttctcatagcagttaataagtctcacaagatctgatggttttatcagggaaaccccatttgcttggttctcattctcgcttgtctgtggccatttaagacacggctttcaccttccgcagtgattgtgaggtctcccctgccatgtggaacagtgagttcattaaatctctttttcttttt-- i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1384066 239 + 108979918 gagtggcgggagggacctggtgggagataattgagtcgtagggcggtttcccatgtactgttctcatagcagtgaataagcctcacaagatctggtgcttttatcggggaagccccttttgcttagttctcgttctcccttgtctgtagccatgtgagacatgcctttcaccctccgcaatgattgtgaggtctcccctgccatgtggaactgtgagttcattaaacctc--tttcttttt-- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1356336 239 - 111193037 gagtggcgggagggacctggtgggagataattgagtcgtagggcggtttcccatgtactgttctcatagcagtgaataagcctcacaagatctggtgcttttatcggggaagccccttttgcttagttctcgttctcccttgtctgtagccatgtgagacatgcctttcaccctccgcaatgattgtgaggtctcccctgccatgtggaactgtgagttcattaaacctc--tttcttttt-- i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1338278 239 - 10304083 gagtggcgggagggacctggtgggagataattgagtcgtagggcggtttcccctgtactgttctcatagcagcgaataagcctcacaagatctgatgcttttatcggggaagccccttttgcttggttctcgttctcccttgtctgtagccatgtgagacatgcctttcaccctctgcaatgattgtgaggtctcccctgccatgtggaactgtgagttcattaaacttc--tttcttttt-- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1410160 239 - 107702431 gtgtggcaggagggacctggtgggagataattgagtcgtagggcggtttcccctgtactgttctcatagcagtgaaaaagcctcacaagatctggtgcttttatcggggaagccccttttgcttggttctcgttctcccttgtctgtagccatgtgagacacgcctttcaccttccgcaatgattgtgaggtctcccctgccatgtggaactgtgagttcattaaacctc--tttcttttt-- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 886977 239 - 2200435 gagtggcgggagggacctggtgggagataattgagtcgtagggcggtttcccctgtactgttctcatagcagtgaataagcctcacaagatctggtgcttttatcggggaagccccttttgcttagttctcattctcccttgtctgtagccatgtgagacatgcctttcaccttccgcaatgattgtgaggtctcccctgccatgtggaactgtgagttcattaaacctc--tttcttttt-- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1333146 239 - 108792865 ctgtggggggaaggacctggtgggagataattgaatcatgggggtggatcctccagactgttttcctggtagtgaataagtctcactagatctgatggttttatcagggaatcccctttcgcttagctccca--ctctcttgtctctggccatgtgagacgtgcccttcatcttttgccatgattgtgaggcctccctagctatgtggaagtgtgagtccattaaacctt--tttttttCttt i calJac3.chr14 C 0 I 2027 s cebCap1.NW_016107827v1 1277238 237 + 1864846 gtatcgggggagggacctggcgggagataattgaatcatgggggtggatcccccagactgttttcctggtagtgaataagtctcaccagatctgatggttttatcagggaatcccctttca-ttggctcccactctctcttgtctatggccatgtgagaagtgcccttcaccttctgccatgattgtgaggcctccc-agctacgtggaagtgtgagttcattaaacctt--tttcttttt-- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 66141 241 + 287728 gtgttgtgggatggaccaggcaggagataattgaatcatgggggtggatcccccagactgttctcatggtagtgaataagtttcactagatctgatggttttatcagggaatcccctttcacttggttctcattctcccttgtccgtggccatgtatgacctgcccttcaccttctgccgtgatggtgaggcctccccagccatgcggaactgtgagtccgttaaacctc--tttttcttttt i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89960614 2038 - 120129022 I e saiBol1.JH378218 1184654 1695 - 7082604 M e otoGar3.GL873658 912549 221 + 5252280 I e dasNov3.JH576208 1620585 1512 + 4416731 I e colAng1.NW_012118821v1 1323179 0 - 13651311 C e macNem1.NW_012011978v1 1384170 956 + 3644372 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=129914.000000 s hg38.chr2_KI270774v1_alt 61370 28 + 223625 aaattacccagtctcaggtatgtcttta s panTro5.chr2A 1338645 28 + 111504155 aaatgacccagtctcaggtatgtcttta i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1299101 28 + 114371477 aaatgacccagtctcaggtatgtcttta i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1323998 28 + 1464242 aaattacccagtctcaggtatgtcttta i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1384305 28 + 108979918 aaattacccagtctggggtatgtcttta i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1356575 28 - 111193037 aaattacccagtctggggtatgtcttta i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1338517 28 - 10304083 aaattacccagtctggggtatgtcttta i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1410399 28 - 107702431 aaattacccagtctggggtatgtcttta i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 887216 28 - 2200435 aaattacccagtctggggtatgtcttta i manLeu1.NW_012103754v1 C 0 C 0 s cebCap1.NW_016107827v1 1277475 28 + 1864846 aaattacccagtctcgggtacgtcttta i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 66382 28 + 287728 aaattacccagtctcaggtatgtcttta i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89960614 2038 - 120129022 I e saiBol1.JH378218 1184654 1695 - 7082604 M e otoGar3.GL873658 912549 221 + 5252280 I e dasNov3.JH576208 1620585 1512 + 4416731 I e calJac3.chr14 1333385 2027 - 108792865 I e colAng1.NW_012118821v1 1323179 0 - 13651311 C e macNem1.NW_012011978v1 1384170 956 + 3644372 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=87614.000000 s hg38.chr2_KI270774v1_alt 61398 20 + 223625 tcagcatgaaaatggactaa s panTro5.chr2A 1338673 20 + 111504155 tcagcatggaaatggactaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1299129 20 + 114371477 tcagcatggaaatggactaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1324026 20 + 1464242 tcagcatgaaaatggactaa i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1384333 20 + 108979918 tcagcgtgaaaatggactaa i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1356603 20 - 111193037 tcagcgtgaaaatggactaa i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1338545 20 - 10304083 acaccatgaaaatggactaa i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1410427 20 - 107702431 tcagcatgaaaatggactaa i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 887244 20 - 2200435 tcagcatgaaaatggactaa i manLeu1.NW_012103754v1 C 0 C 0 s cebCap1.NW_016107827v1 1277503 20 + 1864846 tccacgtggaaatggactca i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 66410 20 + 287728 tccgcgtggaaatggactca i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 912770 20 + 5252280 TCAGGATGTAAAGAATTTCA i otoGar3.GL873658 I 221 C 0 e mm10.chr12 89960614 2038 - 120129022 I e saiBol1.JH378218 1184654 1695 - 7082604 M e dasNov3.JH576208 1620585 1512 + 4416731 I e calJac3.chr14 1333385 2027 - 108792865 I e colAng1.NW_012118821v1 1323179 0 - 13651311 C e macNem1.NW_012011978v1 1384170 956 + 3644372 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=626530.000000 s hg38.chr2_KI270774v1_alt 61418 116 + 223625 tacaCTGCCTGTTTATATTTTTAATTGGCAAGTGCCCTTACGTTGCTGGAGAGCGGGGCCAGCTAACTACAGCCCATGGGCCAACCCTGGTTCCCTCTCCAGTTTCTGCAAGCCCA s panTro5.chr2A 1338693 116 + 111504155 tacaCTGCCTGTTTATATTTTTAATTGGCAAGTGCCCTTACGTTGCTGGAGAGCGGGGCCAGCTAACTACAGCCCATGGGCCAACCCTGGTTCCCTCTCCAGTTTCTGCAAGCCCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1299149 116 + 114371477 tacaCTGCCTGTTTATATTTTTAATTGGCAAGTGCCCTTACGTTGCTGGAGAGCGGGGCCAGCTAACTACAGCCCATGGGCCAACCCTGGTTCCCTCTCCAGTTTCTGCAAGCCCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1324046 116 + 1464242 tacaCTGCCTGTTTATAGTTTTAATTGGCAAGTGCCCTTACGTTGCTGGAGAGCGGGGCCGGCTAACTACAGCCCATGGGCCAACCCTGGTTCCCTCTCCAGTTTCTGCAAGCCCA i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1384353 116 + 108979918 tacaTTGCCTGTTTATATTTTTAATTGGCAAGTGCCCTTAAGTTGCTGGAGAGTGGGGCCAGCTAACTACAGCCCATGGGCCAATGCTGGGCCCCTCTCCGATTTCTGCAAACCCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1356623 116 - 111193037 tacaTTGCCTGTTTATATTTTTAATTGGCAAGTGCCCTTAAGTTGCTGGAGAGTGGGGCCAGCTAACTACAGCCCATGGGCCAACGCTGGGCCCCTCTCCGCTTTCTGCAAACCCA i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1338565 115 - 10304083 tacaTTGCCTGTTTATAATTTTAATTGGCAAGTGCCCATAAGTTGCTGGAGAGTGGGGCCAGCTAACTA-AGCCCATGGGCCAACGCTGGTCCTCTCTCCGGTTTCTGCAAACCCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1410447 115 - 107702431 tacaTTGCCTGTTTATATTTTTAATTGGCAAGTGCCCTTAAGTTGCTGGAGAG-GAGGCCAGCTAACTACAGCCCATGGGCCAACGCTGGGCCCCTCTCCGGTTTCTGCAAACCCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 887264 116 - 2200435 tacaTTGCCTGTTTATATTTTTAATTGGCAAGTGCCCTTAAGTTGCTGGAGAGTGGGGCCAGCTAACTACAGCCCATGGGCCAACGCTGGTCCTCTCTCCGGTTTCTGCAAACCCA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1335412 116 - 108792865 tACATTGCCTGTGGATATTTGTAATTGGCAAGTGCCCTTACATTGCTGGAGAGCAAGGCCAGCTAACTACAGCCCATGGGCCAACTCTGGTTCCCTCTCCAGCTTTTGCAAACTCA i calJac3.chr14 I 2027 C 0 s cebCap1.NW_016107827v1 1277523 116 + 1864846 tacGTTGCCTGTGGATATTTGTAATTGGCTAGTGCCCTTACATTGCTGGAGAGCAAGGCCAGCTAACTACAGCCCATGGGCCAACTCTGGTTCCCTCTCCAGTCTTTGCAAACCCA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 66430 114 + 287728 tacaTTGCCTGTGGATATATGTAATTGGCAAGTGCCCTTACATTGCTGGAGAGCAAGGCCAGCGAACTACAGCCCATGGGCCAACTT--GTTCCCTCTCCAGTTTTTGCAAACCCA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 912790 101 + 5252280 GTGGTTGTCTGTATATTTTTGCATTTGTTAAGT---------TAGCTGAGAACTGTGGTCCCCACACTACAATTCAGGAGCCAAACCTGGTTCCCCAGCC------TGGCAACACA i otoGar3.GL873658 C 0 C 0 e mm10.chr12 89960614 2038 - 120129022 I e saiBol1.JH378218 1184654 1695 - 7082604 M e dasNov3.JH576208 1620585 1512 + 4416731 I e colAng1.NW_012118821v1 1323179 0 - 13651311 C e macNem1.NW_012011978v1 1384170 956 + 3644372 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=499802.000000 s hg38.chr2_KI270774v1_alt 61534 80 + 223625 GCCTCACGGGAGTGCA-----GGGCCTTCTCTGGCC-ACAGTCAGGAGCTGCTTTTTCCCAGGGCTGTGGTGCTGAGCAGAGGTGA s panTro5.chr2A 1338809 80 + 111504155 GCCTCATGGGAGTGCA-----GGGCCTTCTCTGGCC-ACAGTCAGGAGCTGCTTTTTCCCAGGGCTGTGGTGCTGAGCAGAGGTGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1299265 80 + 114371477 GCCTCATGGGAGTGCA-----GGGCCTTCTCTGGCC-ACAGTCAGGAGCTGCTTTTTCCCAGGGCCGTGGTGCTGAGCAGAGGTGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1324162 80 + 1464242 GCCTCACGGTAGTGCA-----GGGCCTTCTCTGACC-ACAGTCAGGAGCTGCTTTTTCCCAGGGCTGTGGTGCTGAGCAGAGGTGA i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1384469 80 + 108979918 GCCTCACAGGAGTGCA-----GGGCCTTCGCTGGCC-GTGGTCAGAAGCTGCTTTTTCCCAGAGGTGTGGTGCTGAGCAGAGGTGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1356739 80 - 111193037 GCCTCACAGGAGTGCA-----GGGCCTTCGGTGGCC-GTGGTCAGAAGCTGCTTTTTCCCAGAGGTGTGGTGCTCAGCAGAGGTGA i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1338680 80 - 10304083 GCCTCACAGGAGTGCA-----GGGCCTTCGCTGGCC-GTGGTCAGAAGCTGCTTTTTCCCAGAGGTGTGGTGCTGAGCAGAGGTGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1410562 80 - 107702431 GCCTCACAGGAGTGCA-----GGGCCTTCGCTGGCC-GTGGTCAGACGCTGCTTTTTCCCAGAGGTGTGGTGCTGAGCAGAGGTGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 887380 80 - 2200435 GCCTCACAGGAGTGCA-----GGGCCTTCGCTGGCC-GTGGTCAGAAGCTGCTTTTTCCCAGAGGTGTGGTGCTGAGCAGAGGTGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1323179 80 - 13651311 GCCTCACGGGAGTGCA-----GGGCCTTCGCTGGCC-GTGGTCAGAAGCTGCTTTTTCCCAGAGGTGTGGTGCTGAGCAGAGGTGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1335528 80 - 108792865 GCCTCACGGGAGTGCA-----GCACCTTTGCTGGGC-AGGGTCAGGAGCTGGTTTTTCCCAGAGCTGTTGTGCTGAGCAGAGGTGA i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1277639 80 + 1864846 GCCTTACAGGAGTGCA-----GCGCCTTCGCTGGGC-AGGGTCAGGAGCTGGTTTTTCCCAGAGCTGTTGTGCTGAGCAGAGGTGA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 66544 79 + 287728 GCCTCACGGGAGTGCA-----GTGCCTTTGCTGGGC-AGGGTCAGGAGCTGGTTTTTCCCAGAGCTG-TGTGCTGAGCAGAGGTGA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 912891 85 + 5252280 GCTCTCTGGAAACACAGCTGTGGCCCTTTGCCTGCCTGTGGCTAAGAATCCTTTTGTTCCACAGCCACAGAGA-GAGCAGGTAGGA i otoGar3.GL873658 C 0 C 0 e mm10.chr12 89960614 2038 - 120129022 I e saiBol1.JH378218 1184654 1695 - 7082604 M e dasNov3.JH576208 1620585 1512 + 4416731 I e macNem1.NW_012011978v1 1384170 956 + 3644372 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=122827.000000 s hg38.chr2_KI270774v1_alt 61614 15 + 223625 TGGAG-CCCCATGGCC s panTro5.chr2A 1338889 15 + 111504155 TGGAG-CCCCATGGCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1299345 15 + 114371477 TGGAG-CCCCATGGCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1324242 15 + 1464242 TGGAG-CCCCATGGCC i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1384549 15 + 108979918 TGGAG-CCCCATAGCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1356819 15 - 111193037 TGGAG-CCCCATGGCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1385126 15 + 3644372 TGGAG-CCCCATGGCC i macNem1.NW_012011978v1 I 956 C 0 s cerAty1.NW_012000820v1 1338760 15 - 10304083 TGGAG-CCTCATGGCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1410642 15 - 107702431 TGGAG-CCCCATGGCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 887460 16 - 2200435 TGGAGCCCCCATGGCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1323259 15 - 13651311 TGGAG-CCCCATGGCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1335608 15 - 108792865 CGGAG-CCCCATGGCC i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1277719 15 + 1864846 CGGAG-CCCCGTGGCC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 66623 15 + 287728 CGGAG-CCCCATGGCC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 912976 11 + 5252280 CAGAG-----ATGGCC i otoGar3.GL873658 C 0 I 566 e mm10.chr12 89960614 2038 - 120129022 I e saiBol1.JH378218 1184654 1695 - 7082604 M e dasNov3.JH576208 1620585 1512 + 4416731 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=74581.000000 s hg38.chr2_KI270774v1_alt 61629 9 + 223625 TGAAACATT s panTro5.chr2A 1338904 9 + 111504155 TGAAACATT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1299360 9 + 114371477 TGAAACATT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1324257 9 + 1464242 TGAAACATT i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1384564 9 + 108979918 TGAAACATT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1356834 9 - 111193037 TGAAACATT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1385141 9 + 3644372 TGAAACATT i macNem1.NW_012011978v1 C 0 I 485 s cerAty1.NW_012000820v1 1338775 9 - 10304083 TGAAACATT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1410657 9 - 107702431 TGAAACATT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 887476 9 - 2200435 TGAAACATT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1323274 9 - 13651311 TGAAACATT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1335623 9 - 108792865 TGAAACATT i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1277734 9 + 1864846 TGAAACACT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 66638 9 + 287728 TGAAACATT i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89960614 2038 - 120129022 I e saiBol1.JH378218 1184654 1695 - 7082604 M e otoGar3.GL873658 912987 566 + 5252280 I e dasNov3.JH576208 1620585 1512 + 4416731 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=302574.000000 s hg38.chr2_KI270774v1_alt 61638 48 + 223625 CACTGCCCCTTCAAATGTGCCTGTTACCGATGGCTCAGAGCACACAGC- s panTro5.chr2A 1338913 48 + 111504155 CACTGCCCCTTCAAATGTGCCTGTTACCGATGGCCCAGAGCACACAGC- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1299369 48 + 114371477 CACTGCCCCTTCAAATGTGCCTGTTACCGATGGCCCAGAGCACACAGC- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1324266 48 + 1464242 CACTGCCCCTTCAAATGTGCCTGTTACCGATGGCTCAGAGCACACAGC- i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1384573 48 + 108979918 CGTTGCCCCTTCAAATGTGCCTGTTATCGATGGCTCAGAGCACACAGC- i rheMac8.chr13 C 0 I 1 s macFas5.chr13 1356843 48 - 111193037 CGTTGCCCCTTCAAATGTGCCTGTTATCGATGGCTCAGAGCACACAGC- i macFas5.chr13 C 0 I 1 s cerAty1.NW_012000820v1 1338784 48 - 10304083 CGTTGCCCCTTCAAATGTGCCTGTTATCGATGGCTCAGAGCACACAGC- i cerAty1.NW_012000820v1 C 0 I 1 s chlSab2.chr14 1410666 48 - 107702431 CATTGCCCCTTCAAATGTGCCTGTTATCGATGGCTCAGAGCACACAGC- i chlSab2.chr14 C 0 I 247 s manLeu1.NW_012103754v1 887485 48 - 2200435 CATTGCCCCTTCAAATGTGCCTGTTATCGATGGCTCAGAGCACACAGC- i manLeu1.NW_012103754v1 C 0 I 1 s colAng1.NW_012118821v1 1323283 48 - 13651311 CGTTGCCCCTTCAAATGTGCCTGTTATCGATGGCTCAGAGCACACAGC- i colAng1.NW_012118821v1 C 0 I 1 s calJac3.chr14 1335632 49 - 108792865 TGCTGTCCCTTCAAATGTGTCGGTTATCAGTGGCTCAGAGCACACAGCC i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1277743 49 + 1864846 TGCTGTCCTTTCAAATGTATCAGTTATCGATGGCTCAGAGCACACAGCC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 66647 49 + 287728 TGCTGTCCCTTCAAATGTGTCAGTTATTGATGGCTCAGAGCACACAGCC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89960614 2038 - 120129022 I e saiBol1.JH378218 1184654 1695 - 7082604 M e otoGar3.GL873658 912987 566 + 5252280 I e dasNov3.JH576208 1620585 1512 + 4416731 I e macNem1.NW_012011978v1 1385150 485 + 3644372 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=805606.000000 s hg38.chr2_KI270774v1_alt 61686 133 + 223625 CCATGCTTAGCGGCTGATGGCACAGGATCATTTGCCACCTGTCCTGGGGGCTGTGAGTCAGGTGTC-TGAGAAAGCGTCAAATGTGGGATCTCTCCAGGGTTGCCCAGGCTCGGCCAGGGCTGGAGCACCTGCC s panTro5.chr2A 1338961 133 + 111504155 CCATGGTTAGCGGCTGACGGCACAGGATCATTTGCCACCTGTCCTGGGGGCCGTGAGTCAGGTGTC-TGAGAAAGCGTCAAATGTGGGATCTCTCCAGGGTTGCCGAGGCTCGGCCAGGGCTGGAGCACCTGCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1299417 133 + 114371477 CCATGGTTAGCGGCTGACGGCACAGGATCATTTGCCACCTGTCCTGGGGGCCGTGAGTCAGGTGTC-TGAGAAAGCGTCAAATGTGGGATCTCTCCAGGGTTGCCGAGGCTCGGCCAGGGCTGGAGCACCTGCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1324314 133 + 1464242 CCATGCTTAGCGGCTGACGGCACAGGATCATTTGCCACCTGTCCTGGGGGCTGTGAGTCAGGTGTC-TGAGAAAGCATCAAATGTGGGATCTCTCCAGGGTTGCCCAGGCTCGGCCAGGGCTGGAGCACCTGCC i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1384622 133 + 108979918 CCGTGCTTAGTGGCTGATGGCACAGGGTCATTTGCCACCTGTCCTGGAGGCTGTGAGTCAGGTGTC-TGAGAGAACGTCAAATGTGGGATCTCTCCGGGGTTGCCCAGGCTCGGCCAGGGCTGGAGCACCTGCC i rheMac8.chr13 I 1 C 0 s macFas5.chr13 1356892 133 - 111193037 CCGTGCTCAGTGGCTGATGGCACAGGGTCATTTGCCACCTGTCCTGGGGGCTGTGAGTCAGGTGTC-TGAGAGAACGTCAAATGTGGGATCTCTCCGGGGTTGCCCAGGCTCGGCCAGGGCTGGAGCACCTGCC i macFas5.chr13 I 1 C 0 s cerAty1.NW_012000820v1 1338833 132 - 10304083 CAGTGCTTAGTGGCTGATGGCACAGGGTCATTTGCCACCTGTCCTGGGGGCTGTGAGTCAGGTGT--TGAGAGAACGTCAAACGTGGGATCTCTCTGGGGTTGCCCAGGCTTGGCCAGGGCTGGAGCACCTGCC i cerAty1.NW_012000820v1 I 1 C 0 s chlSab2.chr14 1410961 133 - 107702431 CCATGCTTAGTGGCTGATGGCACAGGGTCATTTGCCACCTGTCCTGGGGGCTGTGAGTCAGGTGTC-TGAGAGAACGTCAAATGTGGGATCTCTCCGGGGTTGCCCAGGCTCAGCCAGGGCTGGAGCACCTGCC i chlSab2.chr14 I 247 C 0 s manLeu1.NW_012103754v1 887534 134 - 2200435 CAGTGCTTAGTGGCTGATGGCACAGGGTCATTTGCCCCCTGTCCTGGGGGCTGTGAATCAGGTGTCTTGAGAGAACGTCAAATGTGGGATCTCTCCGGGGTTGCCCAGGCTCGGCCAGGGCTGGAGCACCTGCC i manLeu1.NW_012103754v1 I 1 C 0 s colAng1.NW_012118821v1 1323332 133 - 13651311 CCGTGCTTAGTGGCTGATGGCACAAGGTCATTTGCCACTTGTCCTGGGGGCTGTGAGTCAGGTGTC-TGAGAGAACCTCAAATGTGGGATCTCTCCAGGGCTGCCCAGGCTCAGTCAGGGCTGGAGCAGCTGCC i colAng1.NW_012118821v1 I 1 C 0 s calJac3.chr14 1335681 130 - 108792865 CCATGCTTAGTGGTTGGT-GCACACGGTCATTT-CTACCTGTTGGGGG-GCTGTGAGTCAGGTATC-TGAGACAGTGTGGAATGTGGGATCTCTCCTGGGTTGCCCAAGCCCAGCCAGGGCGGGAACACCTGCC i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1277792 131 + 1864846 CCATGCTTAGTGGTTGATGGCACAGGGTCATTT-CCACCTGTCGGGGG-GCTGTGAGTCAGGTGTC-TGAGAGAGCCTGGAATGTGAGATCTCTCCCGGGTTGCCCAGGCTCAGCCAGGGCTGGAGTACCTGCC i cebCap1.NW_016107827v1 C 0 I 24 s aotNan1.NW_018513311v1 66696 131 + 287728 CCATGCTTAGTGGTTGATGGCACACGGTCATTT-CCACCTGTCGGGGGAGCTGTGAGTCAGGTGTC-TGAGAGAGCATCGAATGTGGGAACTCTCCCGGGTTGCCCAGGCTCAGCCAGGGCTGGAGCAGCTGC- i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89960614 2038 - 120129022 I e saiBol1.JH378218 1184654 1695 - 7082604 M e otoGar3.GL873658 912987 566 + 5252280 I e dasNov3.JH576208 1620585 1512 + 4416731 I e macNem1.NW_012011978v1 1385150 485 + 3644372 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=117202.000000 s hg38.chr2_KI270774v1_alt 61819 26 + 223625 TCCAGGGCGACTGTGACTCCGTGCTG s panTro5.chr2A 1339094 26 + 111504155 TCCAGGGCGACTGCGACTCCGTGCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1299550 26 + 114371477 TCCAGGGCGACTGCGACTCCGTGCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1324447 26 + 1464242 TCCAGGGCGACTGCGACTCCGTGCTG i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1384755 26 + 108979918 TCTAGGGCAGCTGGGACTCCGTGCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1357025 26 - 111193037 TCTAGGGCGGCTGGGACTCCGTGCTG i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1338965 26 - 10304083 TCTAGGGCGGCTGGGACTCCGTGCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1411094 26 - 107702431 TCTAGGGCAGCTGGGACTCCGTGCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 887668 26 - 2200435 TCTAGGGCGGCTGGGACTCCGTGCTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1323465 26 - 13651311 TCTAGGGCGGCTGGGACTCCGTGCTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1335811 24 - 108792865 -AGAGGGCAGCCAGGACTCCGTGGT- i calJac3.chr14 C 0 C 0 s aotNan1.NW_018513311v1 66827 25 + 287728 TGGAGGGAGGCCGGGACTCCGTGGT- i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89960614 2038 - 120129022 I e saiBol1.JH378218 1184654 1695 - 7082604 M e cebCap1.NW_016107827v1 1277923 24 + 1864846 I e otoGar3.GL873658 912987 566 + 5252280 I e dasNov3.JH576208 1620585 1512 + 4416731 I e macNem1.NW_012011978v1 1385150 485 + 3644372 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=546840.000000 s hg38.chr2_KI270774v1_alt 61845 112 + 223625 CTCTCCCTGGGAGGCCCTGTTCCTGTCCATGTGGCCCGTGCTGGTGTGACAGTGGGAGAAGAGAGATCTGTGGGAATGCCGTGCACCCGGCAGATGCTGTGTGCACCTGGCG- s panTro5.chr2A 1339120 111 + 111504155 CTCTCCCTGGGAGGCCCTGTTCCTGTCCACGTGGCCCGTGCTGGTGTGACAGTGGGAGGACAGAGATCTGTCGGAATGCCGTGCACCCGGCAGATGCTGTGTGCACCTGGC-- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1299576 111 + 114371477 CTCTCCCTGGGAGGCCCTGTTCCTGTCCACGTGGCCCGTGCTGGTGTGACAGTGGGAGGACAGAGATCTGTCGGAATGCCGTGCACCCGGCAGATGCTGTGTGCACCTGGC-- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1324473 112 + 1464242 CTCTCCCTGGGAGGCCCTGTTCCTGTCCATGTGGCTGGTGCTGGTGTGACAGTGGGAGGACAGAGATCTGTGGGAATGCCGTGCACCCGGCAGATGCTGTGTGCACCTGGCG- i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1384781 92 + 108979918 CCCTCCCCGGGAGGCCCTGTTCCTGTCCATGCGGCCCGTGCTGGTGCAACAGTGGGTGGACAGAGATCTGGGGGAATGCTGTGCACCTGGCG--------------------- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1357051 92 - 111193037 CCCTCCCCGGGAGGCCCTGTTCCTGTCCATGCGGCCCGTGCTGGTGCAACAGTGGGTGGACAGAGATCTGTGGGAATGCTGTGCACCTGGCG--------------------- i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1338991 92 - 10304083 CCCTCCCCAGGAGGCCCTGTTCCTGTCCGTGCGGCCCGTGCTGGTGCAACAGTGGGTGGACAGAGATCTGTGGGAATGCTGTGCACCTGGCG--------------------- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1411120 92 - 107702431 CCCTCCCCGGGAGGCCCTGTTCCTGTTCGTGCGGCCGGTGTTGGTGTGACAGTGGGTGGACAGAGATCTGTGGGAATGCTGTGCGCCTGGCC--------------------- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 887694 92 - 2200435 CCCTCCCCGGGAGGCCCTGTTCCTGTCCATGCGGCCCGTGCTGGTGCAACAGTGGGTGGACAGAGATCTGTGGGAATGCTGTGCACCTGGCG--------------------- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1323491 92 - 13651311 CCCTCCCCGGGAGGCCCTGTTCCTGTCCGTGCGGCCCAGGCTGGTGCAACAGTGGGTGGACAGAGATCTGTGGGAATGCCGTGCACCTGGCG--------------------- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1335835 112 - 108792865 CTCTCCCTGGGAGGCCTCGTTCCTGTCCCTGTGGGCCATGCTGGTGCGACAGTGTGAGGACAGAGATCTGTGGGAATGCCGTCCACCTGGCGGCTGCTGTGTGCACCTGGC-T i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1277947 112 + 1864846 CTCTCCCTGGGAGGCCTCGTTCCTGTCCTTGTGGGCTGTGCTGGTGCACCAGTGCGAGGACAGAGATCTGTGGGAAGGCCGTGCACCTGGCGGCTGCTGTGTGCACCTGGC-C i cebCap1.NW_016107827v1 I 24 C 0 s aotNan1.NW_018513311v1 66852 112 + 287728 CTCTCCCTGGGAGGCCCCGTTCCTGTCCCTGTGGACTATGCTGGTGCGACAGTGCAAGGACAGAGATCTGTGGGAATGCCGTGCACCTGGCAGCTGCTGTGTGCACCTGGC-C i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89960614 2038 - 120129022 I e saiBol1.JH378218 1184654 1695 - 7082604 M e otoGar3.GL873658 912987 566 + 5252280 I e dasNov3.JH576208 1620585 1512 + 4416731 I e macNem1.NW_012011978v1 1385150 485 + 3644372 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=109002.000000 s hg38.chr2_KI270774v1_alt 61957 17 + 223625 GGGGGTTCGTGCCTGAG s panTro5.chr2A 1339231 17 + 111504155 GGGGGTTCCTTCCTGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1299687 17 + 114371477 GGGGGTTCCTTCCTGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1324585 17 + 1464242 GGGGATTCGTGCCTGAG i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1384873 17 + 108979918 GGGGGTTCGTGCCTGTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1357143 17 - 111193037 GGGGGTTTGTGCCTGTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1385635 17 + 3644372 GGGGGTTCGTGCCTGTG i macNem1.NW_012011978v1 I 485 C 0 s cerAty1.NW_012000820v1 1339083 17 - 10304083 GGGGGTTCGTGCCTGTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1411212 17 - 107702431 GGGGGTTCGTGCCTGTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 887786 17 - 2200435 GGGGGTTCGTGCCTGTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1323583 17 - 13651311 GGGGGTTCGTGCCTGTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1335947 16 - 108792865 -GGGGCTTGTGCCTGCG i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1278059 16 + 1864846 -GGGGCTTGTGACTGCA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 66964 16 + 287728 -GGGGCTTGTGCCTGCG i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89960614 2038 - 120129022 I e saiBol1.JH378218 1184654 1695 - 7082604 M e otoGar3.GL873658 912987 566 + 5252280 I e dasNov3.JH576208 1620585 1512 + 4416731 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=73430.000000 s hg38.chr2_KI270774v1_alt 61974 10 + 223625 CTGCTGTAGG s panTro5.chr2A 1339248 10 + 111504155 CTGCTGTAGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1299704 10 + 114371477 CTGCTGTAGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1324602 10 + 1464242 CTGCTGTAGC i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1384890 10 + 108979918 CTGCTGCAGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1357160 10 - 111193037 CTGCTGCAGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1385652 10 + 3644372 CTGCTGCAGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1339100 10 - 10304083 CTGCTGCAGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1411229 10 - 107702431 CTGCTGCAGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 887803 10 - 2200435 CTGCTGCAGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1323600 10 - 13651311 CTGCTACAGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1335963 10 - 108792865 CTGCTGCAGC i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1278075 10 + 1864846 CTGCTGCAGC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 66980 10 + 287728 CTGCTGCAGC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 913553 7 + 5252280 ---CTGCTGT i otoGar3.GL873658 I 566 C 0 e mm10.chr12 89960614 2038 - 120129022 I e saiBol1.JH378218 1184654 1695 - 7082604 M e dasNov3.JH576208 1620585 1512 + 4416731 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=1086596.000000 s hg38.chr2_KI270774v1_alt 61984 142 + 223625 GTG-AAGCTGC--AGTTTC-AGAAG-GTCCGAGAGATGTTAAACCCATTTGGCAGAGGGC-TCTGATTGGATTCT-GCCTCCCCCTGTT-CTGGGGAAACTA-----GGCGGAAGTTGTTCTGCTCCTCTCAAAGGCGGCTCACTGAACCCTGGC s panTro5.chr2A 1339258 142 + 111504155 GTG-AAGCTGC--AGTTTC-AGAAG-GTCCGAGAGATGTTAAACCCATTTGGCAGAAGGC-TCTGATTGGATTCT-GCCTCCCCCTGTT-CTGGGGAAACTA-----GGCGGAAGTTGTTCTGCTCCTCTCAAAGGCGGCTCACTGAACCCTGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1299714 142 + 114371477 GTG-AAGCTGC--AGTTTC-AGACG-GTCCGAGAGATGTTAAACCCATTTGGCAGAGGGC-TCTGATTGGATTCT-GCCTCCCCCTGTT-CTGGGGAAACTA-----GGCGGAAGTTGTTCTGCTCCTCTCAAAGGCGGCTCACTGAACCCTGGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1324612 138 + 1464242 GTG-AAGCTGC--AGTTTC-AGAAG-GTCCGAGAGATGTTAAACCCATTTGGCAGAGGGC-TCTGATTGGATTCT-GCCTCCCCCTGTT-CT-GGGAAACTA-----GGCGGAA---GTTCTGCTCCTCTCAAAGGCGGCTCACTGAACCCTGGC i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1384900 143 + 108979918 GTG-AAGCTGC--AGTTTC-AGAAG-GTCCAAGAGATGTTATACCCATTTGGCAGAGGGCATCTGATTGGATTCT-GCCTCCCCTTGTT-CTGGGGAAATTA-----GGCGGAAGTTGTTCTGCTCCTCTCAAAGGCGGCTCGCTGAACCCCGGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1357170 143 - 111193037 ATG-AAGCTGC--AGTTTC-AGAAG-GTCCAAGAGATGTTATACCCATTTGGCAGAGGGCATCTGATTGGATTCT-GCCTCCCCTTGTT-CTGGGGAAATTA-----GGCGGAAGTTGTTCTGCTCCTCTCAAAGGCGGCTCGCTGAACCCCGGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1385662 142 + 3644372 GTGAAAGCTGCGGAGTTTC-AGAAGTGTCCAAGAGATGTTATA-CCATTTGGC-GAGGGCATCTGATTGGATTCTGGCCTCCCCTTGTT-CTGGGGAAATTA-----GGCG--AGTTGTTCTGCTCCTTCTCAAGGC-GCTCGCTG-ACCCTGGC i macNem1.NW_012011978v1 C 0 I 11 s cerAty1.NW_012000820v1 1339110 143 - 10304083 GTG-AAGCTGC--AGTTTC-AGAAG-GTCCAAGAGATGTTACACCCATTTGGCAGAGGGCATCTGATTGGATTCT-GCCTCCCCTTGTT-CTGGGGAAATTA-----GGTGGAAGTTGTTCTGCTCCTCTCAAAGGCGGCTCGCTGAACCCCGGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1411239 143 - 107702431 GTG-AAGCTGC--AGTTTC-AGAAG-GTCCAAGAGATGTTAAACCCATTTGGCAGAGGGCATCTGATTGGATTCT-GCCTCCCCTTGTT-CTGGGGAAATTA-----GGCGGAAGTTGTTCTGCTCCTCTCAAAGGCGCCTCGCTAAACCCCAGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 887813 143 - 2200435 GTG-AAGCTGC--AGTTTC-AGAAG-GTCCAAGAGATATTACACCCATTTGGCAGAGGGCATCTGATTGGATTCT-GCCTCCCCTAGTT-CTGGGGAAATTA-----GGCGGAAGTTGTTCTGCTCCTCTCAAAGGCGGCTCGCTGAACCCCGGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1323610 142 - 13651311 GTG-AAGCTGC--AGTTTC-AGAAG-GGCCAAGAGATGTTAAACCCATTTGGCAGA-GGCATCTGATTGGATTCT-GCCTCCCCTTGTT-CTGGGGAAATTA-----GGCGGAAATTGTTCTGCTCCTCTCAAAGGCGGCTCGCTGAACCCCAGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1335973 144 - 108792865 GTG-ATGCTGC--CATTTC-AGATG-GTCCGGGAGATGTGAAACCCATTCAGCAGGGGGCATCTGATTGGATTCT-GCCTCCCCCTGTTCCCGGGGAAATTC-----GGTGGAAGTTGTTCTGCTCCCCTCACATGTGGCACAAGGAACCCCAGA i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1278085 143 + 1864846 ATG-ATGCTTC--CATTTC-AGAGG-GTCCGGGAGATGTTAAACCCATTCGGCAGGGGGCATCTGATTGGATTCT-GCCTCCCCCTGTT-CCGGGGAAATTT-----GGCGGAAGTTGTTCTGCTCCCCTCACAGGTGGCATGAGGAATCCTAGA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 66990 143 + 287728 GTG-ATGCTGC--CGTTTC-AGAGG-GTCCGGGAGATGTTAAACCCATTCGGCAGGGGGCATCTGATCGGATTCT-GCCTCCCCCTGTT-CCAGGGAAATTC-----GGTGGAAGTTGTTCTGCTCCCCTCACAGGTGGCACAAGGAACCCCAGA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 913560 141 + 5252280 GTG-ATGCTAG--AGTTTCTGGAAG-CTCTAGGAGAGAGTAAA-CCAACTGGCAGAGGGA-CCTGAATGGATTCC-ATCTCCCTCTGCT-CTGGGGAAATTATAATCAGTGGAAATTGTTCTGCT------GAGGGTAGAACCCTGCACTTGGAC i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1622097 144 + 4416731 GTG-AAGCAGG--AATTTCTGGAAG-GTTTAAGATATCATAAACCTACTTGGCAGATGGGAAATGATTAGATTCT-GCCTCCACCTGTT-GCGGGGAattta-----aataggaattgttctcctcttgctaatggcaacacactgaaatttgac i dasNov3.JH576208 I 1512 C 0 e mm10.chr12 89960614 2038 - 120129022 I e saiBol1.JH378218 1184654 1695 - 7082604 M e nomLeu3.chr19 1052267 2520 + 81552678 M a score=77635.000000 s hg38.chr2_KI270774v1_alt 62126 12 + 223625 GAGGTGCACACC s panTro5.chr2A 1339400 12 + 111504155 GAGGTGCACACC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1299856 12 + 114371477 GAGGTGCACACC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1324750 12 + 1464242 GAGGTGCACACC i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1385043 12 + 108979918 AAGGCACACACC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1357313 12 - 111193037 AAGGCACACACC i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1339253 12 - 10304083 AAAGCGCACACC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1411382 12 - 107702431 AAGGCGCACACC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 887956 12 - 2200435 AAGGCGCACACC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1323752 12 - 13651311 AAGGTGCACACC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1336117 12 - 108792865 AAGATGCACACC i calJac3.chr14 C 0 I 393 s cebCap1.NW_016107827v1 1278228 12 + 1864846 AAGATGCACACC i cebCap1.NW_016107827v1 C 0 I 22 s aotNan1.NW_018513311v1 67133 12 + 287728 AAGATGCACACC i aotNan1.NW_018513311v1 C 0 I 345 s otoGar3.GL873658 913701 12 + 5252280 AGGCTGCTTGAC i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1622241 12 + 4416731 aagttaaacatc i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89960614 2038 - 120129022 I e saiBol1.JH378218 1184654 1695 - 7082604 M e macNem1.NW_012011978v1 1385804 11 + 3644372 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=-6477.000000 s hg38.chr2_KI270774v1_alt 62138 1 + 223625 -A s panTro5.chr2A 1339412 1 + 111504155 -G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1299868 1 + 114371477 -G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1324762 1 + 1464242 -A i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1385055 1 + 108979918 -C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1357325 1 - 111193037 -C i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1339265 1 - 10304083 -C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1411394 1 - 107702431 -C i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 887968 1 - 2200435 -C i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1323764 1 - 13651311 -C i colAng1.NW_012118821v1 C 0 C 0 s cebCap1.NW_016107827v1 1278262 1 + 1864846 -C i cebCap1.NW_016107827v1 I 22 C 0 s otoGar3.GL873658 913713 1 + 5252280 -C i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1622253 1 + 4416731 t- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 67145 345 + 287728 I e mm10.chr12 89960614 2038 - 120129022 I e saiBol1.JH378218 1184654 1695 - 7082604 M e calJac3.chr14 1336129 393 - 108792865 I e macNem1.NW_012011978v1 1385804 11 + 3644372 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=12314.000000 s hg38.chr2_KI270774v1_alt 62139 2 + 223625 TT s panTro5.chr2A 1339413 2 + 111504155 TT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1299869 2 + 114371477 TT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1324763 2 + 1464242 TT i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1385056 2 + 108979918 TT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1357326 2 - 111193037 TT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1385815 2 + 3644372 TT i macNem1.NW_012011978v1 I 11 C 0 s cerAty1.NW_012000820v1 1339266 2 - 10304083 TT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1411395 2 - 107702431 TT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 887969 2 - 2200435 TT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1323765 2 - 13651311 TT i colAng1.NW_012118821v1 C 0 C 0 s cebCap1.NW_016107827v1 1278263 1 + 1864846 -T i cebCap1.NW_016107827v1 C 0 I 1 s otoGar3.GL873658 913714 2 + 5252280 CT i otoGar3.GL873658 C 0 I 2 s dasNov3.JH576208 1622254 2 + 4416731 ct i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 67145 345 + 287728 I e mm10.chr12 89960614 2038 - 120129022 I e saiBol1.JH378218 1184654 1695 - 7082604 M e calJac3.chr14 1336129 393 - 108792865 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=906381.000000 s hg38.chr2_KI270774v1_alt 62141 104 + 223625 --GAGTGGATCAGTTCCAGCACTTGGCATTGACTTTGGAAATCTGAAA--TGTC-TGTGATAAGCCAAA-TAAACTTAGATTTGTTTTATTTCATTTAAAGAGTGAAGGC s panTro5.chr2A 1339415 104 + 111504155 --GAGTGGATCAGTTCCAGCACTTGGCATTGACTTTGGAAATCTGAAA--TGTC-TGTGATAAGCCAAA-TAAACTTAGATTTGTTTTATTTCATTTAAAGAGTGAAGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1299871 104 + 114371477 --GAGTGGATCAGTTCCAGCACTTGGCATTGACTTTGGAAATCTGAAA--TGTC-TGTGATAAGCCAAA-TAAACTTAGATTTGTTTTATTTCATTTAAAGAGTGAAGGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1324765 104 + 1464242 --GAGTGGATCAGTTCCAGCACTTGTCATTGACTTTGGAAATCTGAAA--TGTC-TGTGATAAGCCAAA-TAAACTTAGATTTGTTTTATTTCATTTAAAGAGTGAAGGC i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1385058 104 + 108979918 --GAGTGGATCAATTCCAGCATTTGGCGTTGACTTTGGAAATCTGAAA--TGTC-TGTGATAAGCCAAA-TAAACTTAGATTTGTTTTATTTCATTTAAAAAGTGAAGGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1357328 104 - 111193037 --GAGTGGATCAGTTCCAGCACTTGGCGTTGACTTTGGAAATCTGAAA--TGTC-TGTGATAAGCCAAA-TAAACTTAGATTTGTTTTATTTCATTTAAAAAGTGAAGGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1385817 102 + 3644372 --GAGTGGATCAGTTCCAGCAT---GCGTTGAC-TTGGAAATCTGACAATTGTC-TGTGATAAGCCAAAGTAAACTTAGATTTGTTTTATTTCA-TTAAAGAGTGAAGGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1339268 104 - 10304083 --GAGTGGATCAGTTCCAGCACTTGGCGTTGACTTTGGAAATCTGAAA--TGTC-TGTGATAAGCCAAA-TAAACTTAGATTTGTTTTATTTCATTTAAAAAGTGAAGGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1411397 104 - 107702431 --GAGTGAATCAGTTCCAGCACTTGGCGTTGACTTTGGAAATCTGAAA--TGTC-TGTGATAAGCCAAA-TAAACTTAGATTTGTTTTATTTCATTTAAAAAGTGAAGGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 887971 104 - 2200435 --GAGTGGATCAGTTCCAGCACTTGGCGTTGACTTTGGAAATCTGAAA--TGTC-TGTGATAAGCCAAA-TAAACTTAGATTTGTTTTATTTCATTTAAAAAGTGAAGGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1323767 104 - 13651311 --GAGTGGATCAGTTCCAGCGCTTGGCGTTGACTTTGGAAATCTGAAA--AGTC-TGTGATAAGCCAAA-TAAACTTAGATTTGTTTTATTTCATTTAAAAAGTGAAGGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1336522 104 - 108792865 --GAGTGGATCAGTTCCAGCAGTTGGCATTGACTTTGGATATCTGAAA--TGTC-TGTGATAAGCCAAA-GAAACTTAGATACGTTTTATTTCATTTAAAGAGTGAAGGC i calJac3.chr14 I 393 C 0 s cebCap1.NW_016107827v1 1278265 104 + 1864846 --GAGTGATTCAGTTCCAGCACTTGGCATTGACTTTGGAAATCTGAAA--TGTC-TGTGATAAGCCAAA-TAAACTTAGATATGTTTTATTTCATTTAAAGAGTGAAGGC i cebCap1.NW_016107827v1 I 1 C 0 s aotNan1.NW_018513311v1 67490 104 + 287728 --GAGTGGATCAGTTCCAGTACTTGGCATTGACTTTGGAAATCTGAAA--TGTC-TGTGATAAGTCAAA-TAAACTTAGATATGTTTCATTTCATTTAAAGAGTGAAGGC i aotNan1.NW_018513311v1 I 345 C 0 s otoGar3.GL873658 913718 104 + 5252280 --GCGTGAATCCATACAGCCACTTGAAGCTGACTCTGAATGTGGAAGG--TGTC-TGTCACAAGCAAAA-CAAAGTTAGATTTATTTTATTTCATTCAAAGCGTGAAGAC i otoGar3.GL873658 I 2 I 122 s dasNov3.JH576208 1622256 85 + 4416731 tggcatgaatcaatttaaccacttggcattgaattttgaaatctcaaa--tgtcttggtataaaccaaa-tAA---------------ATTTCATTCAAAAAG------- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89960614 2038 - 120129022 I e saiBol1.JH378218 1184654 1695 - 7082604 M e nomLeu3.chr19 1052267 2520 + 81552678 M a score=65322.000000 s hg38.chr2_KI270774v1_alt 62245 7 + 223625 cccagaa s panTro5.chr2A 1339519 7 + 111504155 cccagaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1299975 7 + 114371477 cccagaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1324869 7 + 1464242 cccagaa i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1385162 7 + 108979918 cccagaa i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1357432 7 - 111193037 cccagaa i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1385919 7 + 3644372 cccagaa i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1339372 7 - 10304083 cccagaa i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1411501 7 - 107702431 cccagaa i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 888075 7 - 2200435 cccagaa i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1323871 7 - 13651311 cccagaa i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1336626 7 - 108792865 Tccagaa i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1278369 7 + 1864846 cccagaa i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 67594 7 + 287728 cccagaa i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1622341 5 + 4416731 --CAGAA i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89960614 2038 - 120129022 I e saiBol1.JH378218 1184654 1695 - 7082604 M e otoGar3.GL873658 913822 122 + 5252280 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=1635952.000000 s hg38.chr2_KI270774v1_alt 62252 221 + 223625 ctctgggaggctgaggcaggtggatcacctaaggtcaggagctcaagatcagcctggccaacatgtcgaaacccagtctctactcaaaatataaaaattagccaggtgtggtggcgcacgcatgtagtcccagctactcaggaaactgaggcaggagaatcgcttgaacccaggag--------gcggaggttgcagtgagccgaggtcgcgccactgcactccagtct s panTro5.chr2A 1339526 221 + 111504155 ctctgggaggctgaggcaggtggatcacctaaggtcaggagctcaagatcagcctggccaacatgtcaaaacccagtctctactcaaaatataaaaattagccagctgtggtggcgcacgcatgtaatcccagctactcaggaaactgaggcaggagaatcgcttgaacccaggaa--------gcggaggttgcagtgagccgaggtcacgccactgcactccagtct i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1299982 221 + 114371477 ctctgggaggctgaggcaggtggatcacctaaggtcaggagctcaagatcagcctggccaacatgtcaaaacccagtctctactcaaaatataaaaattagccagctgtggtggcgcacgcatgtaatcccagctactcaggaaactgaggcaggagaatcgcttgaacccaggag--------gcggaggttgcagtgagccgaggtcgcgccactgcactccagtct i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1324876 221 + 1464242 ctctgggaggctgaggcaggtggatcacctgaggtcaggagctcaagatcagcctggccaacatgtcaaaacccagtctctactcaaaatataaaaattagccaggtgtggtggcgcacgcgtgtaatcccagctactcaggaaactgaggcaggagaatcgcttgaacccgggag--------gtggaggttgcagtgagccgaggttgcgccactgcactccagtct i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1385169 221 + 108979918 ctttgggaggctgagacaggcggatcacctgaggtcaggagttcaagatcagcctggccaacatggtgaaacccagtctctactcaaaatataaaaattagccaggtgtggtggtgcacacatgtaatcccagctactcaggaaactgaggcaggagaatcgcttgaacccaggag--------gcggaggttgcagtgagctgaggtcgtgccgctgcactccaatct i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1357439 221 - 111193037 ctttgggaggctgagacaggcggatcacctgaggtgaggagttcaagatcagcctggccaacatggtgaaacccagtctctactcaaaatataaaaattagccaggtgtggtggtgcacacatgtaatcccagctactcaggaaactgaggcaggagaatcgcttgaacccaggag--------gcggaggttgcagtgagctgaggtcgtgccgctgcactccaatct i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1385926 225 + 3644372 ctttgggaggctgagacaggcggatca-ctgaggtcaggagttcaagatcagcctggccaacatggtgaaacccagtctctactc-aaatat-aaaattagccaggtgtggtggtgcacacatgtaatcccagctactcaggaaactga-gcagcggaatcgcttgaacccaggagacggagttgcggaggttgcagtgagctgaggtcgtgccgctgcactccaatct i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1339379 221 - 10304083 ctttgggaggctaagacaggcggatcacctgaggtcaggagttcaagatcagcctggccaacatggtgaaacccagtctctactcaaaatataaaaattagccaggtgtggtggtgcacacatgtaatcccagctactcaggaaactgaggcaggagaatcacttgaacccaggag--------gcggaggttgcagtgagctgaggtcgtgccgatgcactccaatct i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1411508 221 - 107702431 ctttgggaggctgagacaggcggatcacctgaggtcaggagttcaagatcagcctggccaacatggtgaaacccagtctctactcaaaatataaaaattagccaggtgtggtggtgcacacatgtaatcccagctactcaggaaactgaggcaggagaatcgcttgaacccaggag--------gcagaggttgcagtgagctgaggtcgtgctgctgcactccaatct i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 888082 221 - 2200435 ctttgggaggctgagacaggcggatcacctgaggtcaggagttcaagatcagcctggccaacatggtgaaacccagtctctactcaaaatataaaaattagccaggtgtggtggtgcacacatgtaatcccagctactcaggaaactgaggcaggagaatcgcttgaacccaggag--------gccgaggttgcagtgagctgaggtcgtgccgctgcactccaatct i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1323878 221 - 13651311 ctttgggaggctgaggcgggcagatcacctgaggtcgagagttcaagatcagcctggccaacatggtgaaacccagtctctactcaaaatataaaaattagccaggtgtggtggtgcacacatgtaatcccagctactcaggaaactgaggcaggagaatcgcttgaacccaggag--------gtggaggttgcagtgagccgaggtcgtgccgctgcactccaatct i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1336633 218 - 108792865 ctttgggaggccaaagcaggtggatcacctgaggtc---agttcaaaaccagcctggccaacatggcaaaacccagtctctatgaaaaatacaaaaattagccaagtgtgatggcacatgcatgtaatcccagctattcgggaaactgaggcaggagaatcacttgaacctgggag--------gcagagattgcagtgagccaagattacaccactgcactccagcct i calJac3.chr14 C 0 I 8 s cebCap1.NW_016107827v1 1278376 221 + 1864846 ctttgggaggccaacgcaggcagatcacctgcagtcaggagttcaaaaccagcctggccaacatggcaaaacccagtctctatgaaaaatacaaaaattagccaggtgtgatggcacacgcatgtaatcccagctactcgggaaactgaggcaggaaaatcacttgaacctgggag--------gtggagattgcagtgagccaagattgcaccactgcactccagcct i cebCap1.NW_016107827v1 C 0 I 8 s aotNan1.NW_018513311v1 67601 221 + 287728 ctttgggaggctaaggcaggcggatcacctgcggtcaggagttcaaaaccagcctggccaacatggcaaaacccagtcttcatgaaaaatacaaaaattaggcaggtgtgatggcacatgcatgtaatcccagctactcgggaaactgaggcaggagaatcacttgaacctgggag--------gtggagattgcagtgagccaagattgcaccactgcactccagcct i aotNan1.NW_018513311v1 C 0 I 8 e mm10.chr12 89960614 2038 - 120129022 I e saiBol1.JH378218 1184654 1695 - 7082604 M e otoGar3.GL873658 913822 122 + 5252280 I e dasNov3.JH576208 1622346 0 + 4416731 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=283276.000000 s hg38.chr2_KI270774v1_alt 62473 41 + 223625 gggtgacagggtgagaatctgtctcaaaaaa---------------------------aTGAGTGAAG s panTro5.chr2A 1339747 41 + 111504155 gggtgacagagtgagaatctgtcttaaaaaa---------------------------aTGAGTGAAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1300203 41 + 114371477 gggtgacagagtgagaatctgtctcaaaaaa---------------------------aTGAGTGAAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1325097 41 + 1464242 gggtgacaaagtgagaatctgtctcaaaaaa---------------------------aTGAGTGAAG i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1385390 42 + 108979918 gggtgacagagcaagactctgtctcaaaaaa--------------------------gaaGAGTGAAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1357660 42 - 111193037 gggtgacagagcaagactctgtctcaaaaaa--------------------------gaaGAGTGAAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1386151 42 + 3644372 gggtgacagagcaagactctgtctcaaaaaa--------------------------gaaGAGTGAAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1339600 42 - 10304083 gggtgacagagcaagactctgtctcaaaaaa--------------------------gaaGAGTGAAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1411729 42 - 107702431 gggtgacagagcaagactctgtctcaaaaaa--------------------------gaaGAGTGAAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 888303 42 - 2200435 gggtgacagagcaagactctgtctcaaaaaa--------------------------gaaGAGTGAAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1324099 42 - 13651311 gggcgacagagcaagactctgtctcaaaaaa--------------------------gaaGAGTGAAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1336859 67 - 108792865 gagcaacagcgcaagactctgtctcaaaaaaataaaaaataa-aaaataaaaataaCAAAGAGTAAAG i calJac3.chr14 I 8 C 0 s saiBol1.JH378218 1186351 57 - 7082604 gggcgacagagcaagactctgtctcaaaaaaataaaaaat-----------aacaaCAAAGAGTGAAG i saiBol1.JH378218 M 1695 C 0 s cebCap1.NW_016107827v1 1278605 68 + 1864846 gagtgacagagcaagactctgcctcaaaaaaacaaaacaaaacaaaacaaaaaaaacaaaGAGTGAAG i cebCap1.NW_016107827v1 I 8 C 0 s aotNan1.NW_018513311v1 67830 62 + 287728 gagtgaaaaagcaagactctgcctcaaaaaaataaaaaataa------aaaaataacaaaGAGTGAAG i aotNan1.NW_018513311v1 I 8 C 0 e mm10.chr12 89960614 2038 - 120129022 I e otoGar3.GL873658 913822 122 + 5252280 I e dasNov3.JH576208 1622346 0 + 4416731 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=454408.000000 s hg38.chr2_KI270774v1_alt 62514 51 + 223625 GCAAGGAGATTGAACATAAGAGTGAGTGAGCTCTGATCTTGGTAGGAATGA s panTro5.chr2A 1339788 51 + 111504155 GCAAGGAGATTAAACATAAGGGTGAGTGAGCTCTGATCTTGGTAGGAATGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1300244 51 + 114371477 GCAAGGAGATTAAACATAAGGGTGAGTGAGCTCTGATCTTGGTAGGAATGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1325138 50 + 1464242 GCAAGGAGA-TAAACATAAGAGTGAGTGAGCTCTGATCTTGGTAGGAATGA i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1385432 51 + 108979918 GCAAGGAGATTAAACGTAAGAGCTAGTAAGCTCTGATCTTGGTAGGAATGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1357702 51 - 111193037 GCAAGGAGATTAAACGTAAGAGCTAGGAAGCTCTGATCTTGGTAGGAATGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1386193 51 + 3644372 GCAAGGAGATTAAACGTAAGAGCTAGTAAGCTCTGATCTTGGTAGGAATGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1339642 51 - 10304083 GCAAGGAGATTAAACGTAAGAGCTAGTGAGCTCTGATCTTGGTAGGAATGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1411771 51 - 107702431 ACAAGGAGATTAAACGTAAGAGCTAGTGAGCTCTGATCTTGGCAGGAATGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 888345 51 - 2200435 GCAAGGAGATTAAACGTAAGAGCTAGTGAGCTCTGATCTTGGTAGGAATGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1324141 48 - 13651311 GCAAGGAGATTAC---TAAGAGCTAGTGAGCTCTGATCTTGGCAGGAATGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1336926 51 - 108792865 GCAAGGAGATTAAACACCAGAGTTAGTGAGCTCTGATCTTGGTAGGACTGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1186408 51 - 7082604 GCAAGGAGATTAAACACCAGAGTTAGTGAGCTCTGATCCTGGTAGGAATGA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1278673 51 + 1864846 GCAAGGAGATTAAACACCAGAGTTAGTGAGTTCTGATCTTGGTAGGAAGGA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 67892 51 + 287728 GCAAGGAGATTAAACACCAGAGTTAGTGAGCTTTGATCTTGGTAGGAATGA i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1622346 51 + 4416731 GCAGGGCCATTAAACACAAGAAGTGGCAAGCTTTGTTGTTAGTAGGTATGA i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89960614 2038 - 120129022 I e otoGar3.GL873658 913822 122 + 5252280 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=1693905.000000 s hg38.chr2_KI270774v1_alt 62565 259 + 223625 -----GCCCTCTTGCCATATGTGACATTCAGCCCAGGGCTTGTCCAGGGCTGGAGCAATCCCTAAACAGGCGGTAGATCAAGCCAGGCTGATCACGAGGCACCTTGGAATTCAGAAG--GGAGCCGTGGAATGCAGAGGGGTTCACCATAAGCCCCTCGGCTCTGGGGCCCTCCAGACACCTCTCAGCTCCT-GTGGGTGATGTCTCCTTACGCAGATGTGCTTCAATAATCTCGGGCCTTCTTGTAAACCAGGGCGTCGGTATAGC s panTro5.chr2A 1339839 259 + 111504155 -----GCCCTCTTGCCATATGTGACGTTTAGCCCAGGGCTTGTCCAGGGCCGGAGCAATCCCTAAACAGGCGGTAGATCAAGCCAGGCTGATCACGAGGCACTTTGGAATTCAGAAG--GGAGCCGTGGAATGCAGAGGGGTTCACCATAAGCCCGTCGGCTCTGGGGCCCTCCAGACACCTCTCAGCTCCT-GTGGGTGATGTCTCCTTACGCAGATGTGCTTCGATAATCTCGGGCCTTCTTGTAAACCAGGGCATCGGTACAGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1300295 259 + 114371477 -----GCCCTCTTGCCATATGTGACGTTTAGCCCAGGGCTTGTCCAGGGCCGGAGCAATCCCTAAACAGGCGGTAGATCAAGCCAGGCTGATCACGAGGCACTTTGGAATTCAGAAG--GGAGCCGTGGAATGCAGAGGGGTTCACCATAAGCCCCTCGGCTCTGGGGCCCTCCAGACACCTCTCAGCTCCT-GTGGGTGATGTCTCCTTACGCAGATGTGCTTCGATAATCTCGGGCCTTCTTGTAAACCAGGGCATCGGTACAGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1325188 258 + 1464242 -----GCCCTCTTGCCATATGTGACGTTCAGCCCAGGGCTTGTCCAGGGCCGGAGCAATCCCTAAACAGGCGGTAGATCAAGCCAGGTTGATCACGAGGCACCTTGGAATTCAGAAG--GGAGCCGTGGAATGCAGA-GGGTTCACCATAAGCCACTCGGCTCTGGGGCCCTCCAGACACCTCTCAGCTCCT-GTGGGTGATGTCTCCTTACGCAGATGTGCTTCGATAATCTCGGGCCTTCTTGTAAACCAGGGCGTCGGTACAGC i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1385483 255 + 108979918 -----GTCCTCTTGCCATACGTGAAGATCAGCCCAGGGCTTGCCCAGGGCCGGAACCATCCCTGAGCAGGCAGTAGATCAAACCAGACTGACCACGAGGCACC-TGGA--TCAGAAG--GGAGCCGTGGAATGCAGAGGGCTTCACCAGAGGCCACTCGGCTCTGGGG-CCTCCAGACACCTCTCAGCTCCT-GTAGGTGACGTCTCCTCACACAGATGTGGTTCGATAATCTCGGGCCTTCTTGTAAACCAGGGGGTTGGTACAGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1357753 257 - 111193037 -----GTCCTCTTGCCATACGTGAAGATCAGCCCAGGGCTTGCCCAGGGCCGGAACCATCCCTGAGCAGGCAGTAGATCAAACCAGACTGACCACGAGGCACC-TGGAATTCAGAAG--GGAGCCGTGGAATGCAGAGGGCTTCACCAGAGGCCACTCGGCTCTGGGG-CCTCCAGACACCTCTCAGCTCCT-GTAGGTGACGTCTCCTCACACAGATGTGCTTCGATAATCTCGGGCCTTCTTGTAAACCAGGGGGTTGGTACAGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1386244 257 + 3644372 -----GTCCTCTTGCCATACGTGAAGATCAGCCCAGGGCTTGCCCAGGGCCGGAACCATCCCTGAGCAGGCAGTAGATCAAACCAGACTGACCACGAGGCACC-TGGAATTCAGAAG--GGAGCCGTAGAATGCAGAGGGCTTCACCAGAGGCCACTTGGCTCTGGGG-CCTCCAGACACCTCTCAGCTCCT-GTAGGTGACGTCTCCTCACACAGATGTGCTTCGATAATCTCGGGCCTTCTTGTAAACCAGGGGGTTGGTACAGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1339693 257 - 10304083 -----GTCCTCTTGCCATACGTGAAGATCAGCCCAGGGCTTGCCCAGGGCCGGAACCATCCCTGAGCAGGCGGTAGATCAAACCAGACTGATCACGAGGCACC-TGGAATTCAGAAG--GGAGCCATGGAATGCAGAGGGGTTCACCAGAGGCCACTCGGCTCTGGGG-CCTCCAGACACCTCTCAGCTCCT-GTAGGTGACGTCTCCTCACACAGATGTGCTTCGATAATCTCGGGCCTTCTTGTAAACCAGGGGGTTGGTACAGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1411822 257 - 107702431 -----GTCCTCTTGACATACGTGAAGATCAGCCCAGGGCTTGCCCAGGGCCGGAACCATCCCTGAACAGGCGGTAGATCAAACCAGACTGATCACGAGGCACC-TGGAATTCAGAAG--GGAGCCGTGGAATGTAGAGGGGTTCACCAGAGGCCACTTGGCTCTGGGG-CCTCCAGACACCTCTCAGCTCCT-GTAGGTGACGTCTCCTTACACAGATGTGCTTTGATAATCTCGGGCCTTCTCGTAAACCAGGGGGTTTGTACAGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 888396 257 - 2200435 -----GTCCTCTTGCCATACGTGAAGATCAGCCCAGGGCTTGCCCAGGGCCGGAATCATCCCTGAGCAGGCGGTAGATCAAACCAGACTGATCATGAGGCACC-TGGAATTCAGAAG--GGAGCCGTGGAATGCAGAGGGCTTCACCAGAGGCCACTCGGCTCTGGGG-CCTCCAGACACCTCTCAGCTCCT-GTAGGTGACGTCTCCTCACACAGATGTGCTTCGATAATCTCGGGCCTTCTTGTAAACCAGGGGGTTGGTACAGT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1336977 255 - 108792865 -----GCCCTCTTGCCATATCTGAAGTTCAGCCCAGCGCTTGCTCAGGGCTGGAGCCATCCCTAAACAGGTGGAAGATCAAGCCAGACTGATCATGAGGCACCCTGGAATTCAGAAG--GGAGCCACAGAATGCAAAGGGATGCACCATCAGCCGCTCAGCCCTGGAGCCCTCCCGACACCTCTCAGCTCCT-GGGGGTGACATCTCCTTACACAGC---GGTTCAGTCATCTTGGGCCTTCTTGTAAACCTGGGGGTT-GTGCCGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1186459 255 - 7082604 -----GCCCTCTTGCCACATGTGAAGTTCAGCCCAGGGCTTGCTCAGGGCTGGAGCCATCCCTAAGCAGGTGGAAGATCAAGCCAGACTGATCATGAGGCACCTTGGAATTCAGAAG--GGAGCCACAGAATGCAAAGGGATGCGCCATCAGCCGCTCGGCTCTGGAGCCCTCCTGACACCTCTCAGCTCCT-GGGGGTGATAGCTCCTCATACAGC---GGTTCAATAATCTTGGGCCTTCTTGTAAACCAGGGGGTC-ATACAGC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1278724 256 + 1864846 -----GCTCTCTTGCCATACGTGACGTTCAGCCCAGGGCTTGCTCAGGGCCGGGGCCATCCCTAAACAGGTGGAAGATCAAGCCAGACTGATCATGAGTCACCTTGGAATTCAGAAG--GGAGCCACAGAATGCAAAGGGATGCACCATCACCCCCTCTTCTCTGGAGCCCTCCCGACACCTCTCAGCTCCTGGGGGGTAACATCTCCTCATACAGA---GGTTCAATAATCTTGGGCCTTCTTGTAAACCAGGGAGTT-GTGCAGC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 67943 252 + 287728 -----GCCCTCTTGCCATACGCGAAGTTCAGCCCAGGGCTTGCTCAGGGCCGGAGCCATCCCTAAACAGGTGGAAGATGAAGCCAGACTGATCACGAGG-ACCTTGGAATTCAGAA---GGAGCCACGGAATGCAAAGGGATG-ACAATCAGCTGCTCGGCTCTGGAGCGCTCCCGACACCTCTCAGCTCCT-GGGGGTGACACCTCCTTATACAGA---GGTTCAATAATCTTGGGCCTTCTTGTAAACCAGGGGGTC-GTGCAGC i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1622397 142 + 4416731 ATCTAGCTCTTTT---ATACGTGATATTGAACAGAAGGCTTGGCCAATTCCAAAGAAATTCTTATCCAGGGATTCAAT---ATTAGATTGATTGGGAGACATAGTTGAG-CCAGAAGATGGATCTGGGGAATG-------------------------------AGTG-CCTGTAGAGATC-------------------------------------------------------------------------------------- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89960614 2038 - 120129022 I e otoGar3.GL873658 913822 122 + 5252280 I e colAng1.NW_012118821v1 1324189 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=815965.000000 s hg38.chr2_KI270774v1_alt 62824 120 + 223625 TCACAGCCTTCCATCTTCCCT---GGCACTTTCCCTGTGTGGGGACTAAACA--CAAGGGTTTTCCAGGCTCCCTCCTCCTGGCAGGACACGGCTGTTCACA------------CATG-------------------TCATAATA--TTAT---------TTAATAT s panTro5.chr2A 1340098 120 + 111504155 TCACAGCCTTCCATCTTCCCT---GGCACTTTCCCTGTGTGGGGACTAAACA--CAAGGGTTTTCCAGGCTCCCTCCTCCTAGCAGGACACGGCTGTTCACA------------CATG-------------------TCATAATA--TTAT---------CTAATAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1300554 120 + 114371477 TCACAGCCTTCCATCTTCCCT---GGCACTTTCCCTGTGTGGGGACTAAACA--CAAGGGTTTTCCAGGCTCCCTCCTCCTAGCAGGACACGGCTGTTCACA------------CATG-------------------TCATAATA--TTAT---------CTAATAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1325446 120 + 1464242 TCACAGCCTTCCATCTTCCCT---GGCACTTTCCCTGTGTGGGGACTAAACA--CAAGGGTTTTCCAGGCTCCCTCCTCCTGGCAGGACATGGCTGTTCACA------------CATG-------------------TCATAATA--CTAT---------TTAATAT i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1385738 120 + 108979918 TCACAGCCTTCCATCTTCCCC---GGCACTTTCCCCGTGTGGGGACTAAACA--CAAGGGTCTTCCAGGCTCCCTCCTCCTGGCAGAACACGGCTGCTCACA------------CATG-------------------TCATAATA--TTAT---------TTAATAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1358010 120 - 111193037 TCACAGCCTTCCATCTTCCCC---GGCACTTTCCCCGTGTGGGGACTAAACA--CAAGGGTCTTCCAGGCTCCCTCCTCCTGGCAGAACACGGCTGCTCACA------------CATG-------------------TCATAATA--TTAT---------TTAATAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1386501 120 + 3644372 TCACAGCCTTCCATCTTCCCC---AGCACTTTCCCCGTGTGGGGACTAAACA--CAAGGGTCTTCCAGGCTCCCTCCTCCTGGCAGAACACGGCTGCTCACA------------CATG-------------------TCATAATA--TTAT---------TTAATAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1339950 120 - 10304083 TCACAGCCTTCCATCTTCCCC---GGCACTTTCCCCGTGTGGGGACTAAACA--CAAGGGTCTTCCAGGCTCCCTCCTCCTGGCAGGACATGGCTGCTCACA------------TATG-------------------TCATAATA--TTAT---------TTAATAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1412079 120 - 107702431 TCACAGCCTTCCATCTTCCCC---AGCACTTTCCCCGTGTGGGGACTAAACA--CAAGGGTTTTCCAGGCTCCCTCCTCCTGGCAGGACACGGCTGCTCTCA------------CACG-------------------TCATAATA--TTAT---------TTAATAT i chlSab2.chr14 C 0 I 102 s manLeu1.NW_012103754v1 888653 120 - 2200435 TCACAGCCTTCCATCTTCCCC---GGCACTTTCCCCGTGTGGAGACTAAACA--CAAGAGTCTTCCAGGCTCCCTCCTCCTGGCAGGACATGGCTGCTCACA------------CATG-------------------TCATAATA--TTAT---------TTAATAT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1337232 119 - 108792865 TCACAGCCTTGCATCTTCCCT---GGCGCTTTCTCCGTGCAGGGACAAAACA--T--GGGTTCTCCAAGCTCCCTCCTCCGC-TAGGCCATGGCTGGTCACA------------CATG-------------------TCATAATAAGATAG---------TTAATAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1186714 119 - 7082604 TCACAGCCTTCCGTCTTCCCT---GGCACTTTCTCCGTGCGGGGACAAAACA--T--GGATTTCCCAAGCTCCCTCCTCGTC-CAGGGCACGGCTGGTCACA------------CGTG-------------------TCATGAGAAGATAG---------TTAATAT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1278980 119 + 1864846 TCACAGCCTTCCATCTTCCGT---GGCGTTTTCTCCGTGTAGGGACATAACA--T--GGATTCCCCAAGCTCCCCGCTCCTC-TAGGCCACGGCTGGTCACA------------GGTG-------------------TCATAATAAGATAG---------TTAATAT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 68195 119 + 287728 TCACAGCCTTCCATCTTCCCT---AGCGCTTTCTCCGTGCGGGGACAAAACA--T--GGATTTTCCAAGCTCCCTCCTCCTC-TAGGCCATGGCTGGTCACA------------CATG-------------------TCATAAGAAGATAG---------TTAATAT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 913944 137 + 5252280 TCCTACCCCTTCACCTTCCC----GGCACTTTCCTCCTGCTGCTTCCAAAGG--CCAGGATTTCC--AGCTTCCTTGTCTTGGCC-AATAGGGATACTAACCCCGCCTGGGGTTCATT-------------------CCTTACCA--TTATGAACTCCTGGTAATGC i otoGar3.GL873658 I 122 I 2 s dasNov3.JH576208 1622539 140 + 4416731 CTACA-----CCATCTTCTCTTTGGGTGCTTTCCTTGTGCAGTGCTTTAAAAGTTCACGATTTTCCCAACTTCCTCATTCTGACAAAACATACCTACCCCCC------------AAGGATCTTATCTATGTATGAATTCctgata--gtgc--------cttaatat i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89960614 2038 - 120129022 I e colAng1.NW_012118821v1 1324189 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=614393.000000 s hg38.chr2_KI270774v1_alt 62944 84 + 223625 CATAAT-----GTTTCTGTCAGTA-TTTTTTCATTTAGTAAAGAATCTTTGGAC-----TTTCTTAACTCAACCTAAAGAAATAACTTTAAAAAT s panTro5.chr2A 1340218 84 + 111504155 CATAAT-----GTTTCTGTCAGTA-TTTTTTCATTTAGTAAAGAATCTTTGGAC-----TTTCTTAActcaacctaaagaaataactttaaaaat i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1300674 84 + 114371477 CATAAT-----GTTTCTGTCAGTA-TTTTTTCATTTAGTAAAGAATCTTTGGAC-----TTTCTTAACTCAACCTAAAGAAATAACTTTAAAAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1325566 82 + 1464242 CATAAT-----TTTTCTGTCAGTA-TTTTTTCATTTAGTAAAGAATC-TTGGAC-----TTTCTTAACTCAACCTAAAGAAATAACTTT-AAAAT i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1385858 79 + 108979918 CATAAT-----TTTTATATCagta-ttttttcatttagtaaagaatctttggac-----tttctt-----aacctaaagaaataactttaaaaat i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1358130 79 - 111193037 CATAAT-----TTTTATATCagta-ttttttcatttagtaaagaatctttggac-----tttctt-----aacctaaagaaataactttaaaaat i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1386621 79 + 3644372 CATAAT-----TTTTATATCagta-ttttttcatttagtaaagaatctttggac-----tttctt-----aacctaaagaaataactttaaaaat i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1340070 79 - 10304083 CATAAT-----TTTTATATCagta-ttttttcatttagtaaagaatctttggac-----tttctt-----aacctaaagaaataactttaaaaat i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1412301 84 - 107702431 CATAAT-----CTTTCTATCAGTA-TTTTTTCATTTAGTAAAGAATCTTTGGAC-----TTTCTTAACTCAACCTAAAGAAATAACTTTAAAAAT i chlSab2.chr14 I 102 I 309 s manLeu1.NW_012103754v1 888773 79 - 2200435 CATAAT-----TTTTATATCagta-ttttttcatttagtaaagaatctttggac-----tttctt-----aacctaaagaaataactttaaaaat i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1337351 66 - 108792865 CATAAT-----TTTTCTATCA-----------ATTTAGTAAAGAA---TTGGAC-----TTTCTT-----AACCTAAAGAAATAACTTTAAAAAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1186833 79 - 7082604 CATAAT-----TTTTCTATCAGTA-CTTTTCCATTTAGTAAAGAATCTTTGGAC-----TTTCTT-----AACCTAAAGAAATAACTTTAAAAAT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1279099 59 + 1864846 CATAAT-----TTTTCTATCAGT---------ATTT------------TTGGAC-----TTTCTT-----AACCTAAAGAAATAACTTTCAAAAT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 68314 80 + 287728 CATAAT-----TTTTCTATCAGTATTTttttcatttagtaaagcatctttggac-----tttctt-----aacctaaagaaataactttaaaaat i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 914083 89 + 5252280 CAGTATTCTCATTTTCCATGTAGA-GTTTTTCTTTTGATAAAGAGTCTTTGGAC-----TTTCTTAACTCCACCTAAAGAAATAACTTTAAAAGT i otoGar3.GL873658 I 2 C 0 s dasNov3.JH576208 1622679 81 + 4416731 tataac-----tttcctgtcaaaa--catttcatttaataaag--tctttggaccacaatctctt-----aacctaaaggaataattttaaaagt i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89960614 2038 - 120129022 I e colAng1.NW_012118821v1 1324189 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=1775968.000000 s hg38.chr2_KI270774v1_alt 63028 214 + 223625 GAAAATACCAGGCATAAC-AAAATCTTT-----GAGAAATTTAGGGGCAGGCATGTGTCCTGT--------AGACATCACATTTTCCAAGATCCAAGTACTG-AGAGTCGAGAGTTTTAAGAGCAGTATAG--TTCACAGTTTGGTGATAAATGGCATTA-AATGTCTCATTACTACACTGACTCTGAAAATATGTCAAATGTGACTTTAAAAAAGATTACGTAGAAAATCT s panTro5.chr2A 1340302 219 + 111504155 gaaaataccaggcataac-aaaatctttgtaaagagaaatttaggggcagACACGTGTCCTGT--------AGACATCACATTTTCCAAGATCCAAGTACTG-AGAGTCGAGAGTTTTAAGAGCAGTATAG--TTCACAGTTTGGTGATAAATGGCATTA-AATGTCTCATTACTACACTGACTCTGAAAATATGTCAAATGTGACTTTAAAAAAGATTACGTAGAAAATCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1300758 219 + 114371477 GAAAATACCAGGCATAAC-AAAATCTTTGTAAAGAGAAATTTAGGGGCAGACACGTGTCCTGT--------AGACATCACATTTTCCAAGATCCAAGTACTG-AGAGTCGAGAGTTTTAAGAGCAGTATAG--TTCACAGTTTGGTGATAAATGGCATTA-AATGTCTCATTACTACACTGACTCTGAAAATATGTCAAATGTGACTTTAAAAAAGATTACGTAGAAAATCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1325648 219 + 1464242 GAAAATACCAGGCATAAC-AAAATCTTTGTAAAGAGAAATTTAGGGGCAGACATGTGTCCTGT--------AGACATCACATTTTCCAAGATCCAAGTACTG-AGAGTCGAGAGTTTTAAGAGCAGTATAG--TTCACAGTTTGGTGATAAATGGCATTA-AATGTCTCATTACTACACTGACTCTGAAAATATGTCAAATGTGACTTTAAAAAAGATTAGGTAGAAAATCT i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1385937 226 + 108979918 gaaaataccaggcataac-aaaatctttgtaaagagatatttaggggcagACATGTGTCCTGTAAACCTTAAGACATCACATTTTCCAAGATCTGAGTACTCAAGAGTCAAGAGTTTTAAGAACAGCATAG--TTCGCAGTTTGGTGATAAATGACATCA-AATGTCTCATTACTACACTGA--CTGAAAATATGTCAAATGTGACTTTAAAAAAGATTAGGTAGAAAATCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1358209 225 - 111193037 gaaaataccaggCATAAC-AAAATCTTTGTAAAGAGATATTTAGGAGCAGACATGTGTCCTGTAAACCTTAAGACATCACATTTTCCAAGATCTGAGTACTC-AGAGTCAAGAGTTTTAAGAACAGCATAG--TTCGCAGTTTGGTGATAAATGACATCA-AATGTCTCATTACTACACTGA--CTGAAAATATGTCAAATGTAACTTTAAAAAAGATTAGGTAGAAAATCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1386700 225 + 3644372 gaaaataccaggcataac-aaaatctttgtaaagagatatttaggggcagACATGTGTCCTGTAAACCTTAAGACATCACATTTTCCAAGATCTGAGTACTC-AGAGTCAAGAGTTTTAAGAACAGCATAG--TTCGCAGTTTGGTGAAAAATGACATCA-AATGTCTCATTACTACACTGA--CTGAAAATATGTCAAATGTGACTTTAAAAAAGATTAGGTAGAAAATCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1340149 225 - 10304083 gaaaataccaggcataac-aaaatctttgtaaagagatatttaggggcagACATGTGTCCTGTAAACCTTAAGACATCACATTTTCCAAGATCTGAGTACTC-AGAGTCAAGAGTTTTAAGAACAGCATTG--TTCGCAGTTTGGTGATAAATGACATCA-AATGTCTCATTACTACACTGA--CTGAAAATATGTCAAATGTGACTTTAAAAAAGATTAGGTAGAAAATCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1412694 225 - 107702431 GAAAATACCAGGCATAAC-AAAATCTTTGTAAAGAGAGGTTTAGGAGCAGACATGTGTCCTGTAAACCTTAAGACATCACATTTTCCAAGATCCGAGTACTC-AGAGTCAAGAGTTTTAAGAACAGCATAG--TTCACAGTTTGGTGATAAATGGCATCA-AATGTCTCATTACTACACTGA--CTGAAAATATATCAAATGTGACTTTAAAAAAGATTAGGTAGAAAATCT i chlSab2.chr14 I 309 C 0 s manLeu1.NW_012103754v1 888852 225 - 2200435 gaaaataccagggataac-aaaatctttgtaaagagatatttaggggcaggCATGTGTCCTGTAAACCTTAAGACATCACATTTTCCAAGATCTGAGTACTC-AGAGTCAAGAGTTTTAAGAACAGCATAG--TTCACAGTTTGGTGATAAATGACATCA-AATGTCTCATTACTACACTGA--CTGAAAATATGTCAAATGTGACTTTAAAAAAGATTAGGTAGAAAATCT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1337417 207 - 108792865 GAAAATG-CAGGCAAAAC-AAAATCCTTGTCAAGAGAAATTTAGGGGCCGATATGTGTCCTGTAAACCTTATG--ATCACATTT----------------TC-AGGGTCAAGAGTTTTAAGAAGAGCATAG--TTCACTGTTCGCTGATAAATGGCATCA-AATTTCTCCTTACTGCACTGACTCTGAAAATGTGTCAACTGTGACTTTATAAAAGATTAAGTA-AAAACCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1186912 226 - 7082604 GAAAATACCAGGCAACACAAAAATCCTTGTAAAGAGAAATTTAGGGGCAGATATGTGTCCTGTAAACCTTATG--GTCACATTTTCCAAGATCCTAGCACTC-AGGGTCAAGAGGTTTAAGAACAGCATAC--TTCACTGTTTTCTGATAAATGGCATCA-AATGTCTCCTTACTACACTGACTCTGAAAATATGTCAAATGTGACCTTATAAAAGATTAAGTAGAAAACCT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1279158 225 + 1864846 GAAAATACCAGGCAAAAC-AAAATCCTTGTAAAGAGAAATTTAGGGGCAGATTTGTGTCCTGTAAACCTTATG--ATCACATTTTCCAAGATCCGAGCACTC-AGGGTAAAGAGTTTTAAGAACAGCGTAG--TTCACTGTTTGCTGATAAATGGCATCA-AATGTCTCCTTACTACACTGACTCTGAAAATATGTCAAATGTGACTTTATAAAAGATTAAGTAGAAAATCT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 68394 223 + 287728 gaaaataccaggcgaaac-aaaacccttgtaaagagaaatttaggggcaggTATGTGTCCTGTAAACCTTGTG--ATCACATTTTCCAAGATCCGAGCACTC-AGGGTCAAGAGTTTTAAGAAGAGCGTAG--TTCACTGTTTGCTGATAAATGGCATCA-AACCTCTCCTTACTGCACTGACTCTGAAAATACGTCAAATGTGACTTTATAAAAGATTAAGTAGAAAA--T i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 914172 228 + 5252280 CTTAATACTAAGCACAAC-AACAGACTTGTAAAGGGCAATTTAGGGGCAGATACACATAAAGTAAACCTT-ATATGCCACATTTTCCAAGACCTAGGTAATT-GCAACCAAGAACTTTAAGGAAAGCACAGTCTCCGTTGTTTATTGACAAAGGGCACCAGAATGTTCCATGACAGCACTAATGCTGAAGAGATGTCAAATGTGAC-TTAGAAAAGGTTAAGTAGAAATTCT i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1622760 228 + 4416731 gcaaatatcaggtacAAC-AATTGTCCCCTAACGAGCAACTTAGACGCAGACATACATTCAGTAAGTCTTAAGCTACCACATTTGCCAAGAACACAGTAATC-AGAGTCAAGAGTTGCATGAAAAACATAG--TTCACACTTTGTTGACAAATGTCAACAAAATGTATCATTACGTTGTTGATCCTGAAAAGAAGTTAAATATGACTTTACAAAAGGTTAAGTAGAAAATCT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89960614 2038 - 120129022 I e colAng1.NW_012118821v1 1324189 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=439475.000000 s hg38.chr2_KI270774v1_alt 63242 44 + 223625 ATTTGTTCCTTATTTTATTTGATAACCCTGAAACACAATTTTTC s panTro5.chr2A 1340521 44 + 111504155 GTTTGTTCCTTATTTTATTTGATAACCCTGAAACACAATTTTTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1300977 44 + 114371477 GTTTGTTCCTTATTTTATTTGATAACCCTGAAACACAATTTTTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1325867 43 + 1464242 GTTT-TTCCTTATTTTATTTGATAACCCTGAAACACAATTTTTC i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1386163 42 + 108979918 GTTTGCTCCTTATTTTATTTGATAACCCTGAA--ACAATTTTTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1358434 44 - 111193037 GTTTGCTCCTTATTTTATTTGATAACCCTGAAACACAATTTTTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1386925 44 + 3644372 GTTTGCTCCTTATTTTATTTGATAACCCTGAAACACAATTTTTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1340374 44 - 10304083 GTTTGCTCCTTATTTTATTTGATAACCCTGAAACACAATTTTTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1412919 44 - 107702431 ATTTGCTCCTTATTTTATTTGATAACCCTGAAACACAATTTTTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 889077 44 - 2200435 GTTTGCTCCTTATTTTATTTGATAACCCTGAAACACAATTTTTC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1337624 44 - 108792865 GTTTGCTCCTTATTTTATTTGGTAACCCTGAAATACAATTTTTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1187138 44 - 7082604 GTTTGCTCCTTATTTTATTTGATAACCCTGAAATACAATTTTTC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1279383 44 + 1864846 GTTTGCTCCTTATTTTATTTGATAACCCTGAAATACAATTTTTC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 68617 44 + 287728 GTTTGCTCATTATTTTATTTGATAACACTGAAATACAATTTTTC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 914400 44 + 5252280 GATTGCTTCATATTTTATTTGATAGCACTGAAGAGTAATTTTTT i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89962652 44 - 120129022 ATCTGTTCTTTATGTTATCTAATAACATAAAAAAATAATTTTCC i mm10.chr12 I 2038 C 0 s dasNov3.JH576208 1622988 44 + 4416731 GTTTGTTCCTTATTTTAGTGGAGAACAATGAAAAGTAATTTTTC i dasNov3.JH576208 C 0 C 0 e colAng1.NW_012118821v1 1324189 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=90399.000000 s hg38.chr2_KI270774v1_alt 63286 9 + 223625 CCATGAAAA s panTro5.chr2A 1340565 9 + 111504155 CAATGAAAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1301021 9 + 114371477 CAATGAAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1325910 9 + 1464242 CAATGAAAA i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1386205 9 + 108979918 CAATGAAAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1358478 9 - 111193037 CAATGAAAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1386969 9 + 3644372 CAATGAAAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1340418 9 - 10304083 CAATGAAAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1412963 9 - 107702431 CAATGAAAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 889121 9 - 2200435 CAATGAAAA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1337668 9 - 108792865 TAATGAAAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1187182 9 - 7082604 TAATGAAAA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1279427 9 + 1864846 TAATGAAAA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 68661 9 + 287728 CAATGAAAA i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 89962696 9 - 120129022 CAATGAAAA i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1623032 9 + 4416731 CAATGAAGA i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 914444 0 + 5252280 C e colAng1.NW_012118821v1 1324189 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=33104.000000 s hg38.chr2_KI270774v1_alt 63295 6 + 223625 TCTAAT s panTro5.chr2A 1340574 6 + 111504155 TCTAAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1301030 6 + 114371477 TCTAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1325919 6 + 1464242 TCTAAT i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1386214 6 + 108979918 TATAAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1358487 6 - 111193037 TATAAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1386978 6 + 3644372 TATAAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1340427 6 - 10304083 TCTAAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1412972 6 - 107702431 TCTAAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 889130 6 - 2200435 TCTAAT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1337677 6 - 108792865 TCTAAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1187191 6 - 7082604 TCGGAT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1279436 6 + 1864846 TCTAAC i cebCap1.NW_016107827v1 C 0 C 0 s mm10.chr12 89962705 6 - 120129022 CCTCAT i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1623041 4 + 4416731 --CCAT i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 68670 0 + 287728 C e otoGar3.GL873658 914444 0 + 5252280 C e colAng1.NW_012118821v1 1324189 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=8281.000000 s hg38.chr2_KI270774v1_alt 63301 1 + 223625 T s panTro5.chr2A 1340580 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1301036 1 + 114371477 T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1325925 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1386220 1 + 108979918 T i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1358493 1 - 111193037 T i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1386984 1 + 3644372 T i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1340433 1 - 10304083 T i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1412978 1 - 107702431 T i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 889136 1 - 2200435 T i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1337683 1 - 108792865 T i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1187197 1 - 7082604 T i saiBol1.JH378218 C 0 C 0 s mm10.chr12 89962711 1 - 120129022 T i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1623045 1 + 4416731 T i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 68670 0 + 287728 C e cebCap1.NW_016107827v1 1279442 0 + 1864846 C e otoGar3.GL873658 914444 0 + 5252280 C e colAng1.NW_012118821v1 1324189 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=2730.000000 s hg38.chr2_KI270774v1_alt 63302 2 + 223625 TA s panTro5.chr2A 1340581 2 + 111504155 TA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1301037 2 + 114371477 TA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1325926 2 + 1464242 TA i gorGor5.CYUI01015607v1 C 0 C 0 s mm10.chr12 89962712 2 - 120129022 TA i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1623046 2 + 4416731 TA i dasNov3.JH576208 C 0 I 35 e aotNan1.NW_018513311v1 68670 0 + 287728 C e saiBol1.JH378218 1187198 0 - 7082604 C e cebCap1.NW_016107827v1 1279442 0 + 1864846 C e otoGar3.GL873658 914444 0 + 5252280 C e calJac3.chr14 1337684 0 - 108792865 C e colAng1.NW_012118821v1 1324189 0 - 13651311 C e manLeu1.NW_012103754v1 889137 0 - 2200435 C e chlSab2.chr14 1412979 0 - 107702431 C e cerAty1.NW_012000820v1 1340434 0 - 10304083 C e macNem1.NW_012011978v1 1386985 0 + 3644372 C e macFas5.chr13 1358494 0 - 111193037 C e rheMac8.chr13 1386221 0 + 108979918 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=910.000000 s hg38.chr2_KI270774v1_alt 63304 1 + 223625 T s panTro5.chr2A 1340583 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1301039 1 + 114371477 T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1325928 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s mm10.chr12 89962714 1 - 120129022 T i mm10.chr12 C 0 I 21660 e aotNan1.NW_018513311v1 68670 0 + 287728 C e saiBol1.JH378218 1187198 0 - 7082604 C e cebCap1.NW_016107827v1 1279442 0 + 1864846 C e otoGar3.GL873658 914444 0 + 5252280 C e dasNov3.JH576208 1623048 35 + 4416731 I e calJac3.chr14 1337684 0 - 108792865 C e colAng1.NW_012118821v1 1324189 0 - 13651311 C e manLeu1.NW_012103754v1 889137 0 - 2200435 C e chlSab2.chr14 1412979 0 - 107702431 C e cerAty1.NW_012000820v1 1340434 0 - 10304083 C e macNem1.NW_012011978v1 1386985 0 + 3644372 C e macFas5.chr13 1358494 0 - 111193037 C e rheMac8.chr13 1386221 0 + 108979918 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=55321.000000 s hg38.chr2_KI270774v1_alt 63305 98 + 223625 Tggccaggtgcggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggcggatcatgaggtcaggagatcaagaccatcctggctaata s panTro5.chr2A 1340584 98 + 111504155 Tggccaggtgtggtggctcacgcctgtaatcccagcactttgggaggccaaggtgggcggatcatgaggtcaggagatcaagaccatcctggctaata i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1301040 98 + 114371477 Tggccaggtgtggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggcggatcatgaggtcaggagatcaagaccatcctggctaata i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1325929 98 + 1464242 Tggccaggtgcggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggcggatcatgaggtcaggagatcaagaccatcctagctaata i gorGor5.CYUI01015607v1 C 0 C 0 e aotNan1.NW_018513311v1 68670 0 + 287728 C e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1187198 0 - 7082604 C e cebCap1.NW_016107827v1 1279442 0 + 1864846 C e otoGar3.GL873658 914444 0 + 5252280 C e dasNov3.JH576208 1623048 35 + 4416731 I e calJac3.chr14 1337684 0 - 108792865 C e colAng1.NW_012118821v1 1324189 0 - 13651311 C e manLeu1.NW_012103754v1 889137 0 - 2200435 C e chlSab2.chr14 1412979 0 - 107702431 C e cerAty1.NW_012000820v1 1340434 0 - 10304083 C e macNem1.NW_012011978v1 1386985 0 + 3644372 C e macFas5.chr13 1358494 0 - 111193037 C e rheMac8.chr13 1386221 0 + 108979918 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=9068.000000 s hg38.chr2_KI270774v1_alt 63403 11 + 223625 cggtgaaaccc s panTro5.chr2A 1340682 11 + 111504155 cggtgaaaccc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1301138 11 + 114371477 cggtgaaaccc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1326027 11 + 1464242 cggtgaaaccc i gorGor5.CYUI01015607v1 C 0 C 0 s otoGar3.GL873658 914444 11 + 5252280 CAGTGAAACTT i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 68670 0 + 287728 C e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1187198 0 - 7082604 C e cebCap1.NW_016107827v1 1279442 0 + 1864846 C e dasNov3.JH576208 1623048 35 + 4416731 I e calJac3.chr14 1337684 0 - 108792865 C e colAng1.NW_012118821v1 1324189 0 - 13651311 C e manLeu1.NW_012103754v1 889137 0 - 2200435 C e chlSab2.chr14 1412979 0 - 107702431 C e cerAty1.NW_012000820v1 1340434 0 - 10304083 C e macNem1.NW_012011978v1 1386985 0 + 3644372 C e macFas5.chr13 1358494 0 - 111193037 C e rheMac8.chr13 1386221 0 + 108979918 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=94063.000000 s hg38.chr2_KI270774v1_alt 63414 181 + 223625 cgtctctactaaaaatacaaaaaattagcagggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcatgaacccgggaggcagagcttggagtgagccgagatcactttactgcactccagcctgggcgacagagcgagactctgtctc----aaaaaaaa s panTro5.chr2A 1340693 182 + 111504155 cgtctctactaaaaatacaaaaaattagcagggtgtggtggcgggtgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcactttactgcagtccagcctgggtgacagagcgagactctgtctc---aaaaaaaaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1301149 185 + 114371477 cgtctctactaaaaatacaaaaaattagcagggtgtggtggcgggtgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcactttactgcactccagcctgggtgacagagcgagactctgtctacaaaaaaaaaaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1326038 179 + 1464242 cgtctctactaaaaatacaaaaaattagcagggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttccagtgagccgagatcacgccactgcactccagcctgggcgacagagcgagactctgtctc------aaaaaa i gorGor5.CYUI01015607v1 C 0 C 0 e aotNan1.NW_018513311v1 68670 0 + 287728 C e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1187198 0 - 7082604 C e cebCap1.NW_016107827v1 1279442 0 + 1864846 C e otoGar3.GL873658 914455 0 + 5252280 C e dasNov3.JH576208 1623048 35 + 4416731 I e calJac3.chr14 1337684 0 - 108792865 C e colAng1.NW_012118821v1 1324189 0 - 13651311 C e manLeu1.NW_012103754v1 889137 0 - 2200435 C e chlSab2.chr14 1412979 0 - 107702431 C e cerAty1.NW_012000820v1 1340434 0 - 10304083 C e macNem1.NW_012011978v1 1386985 0 + 3644372 C e macFas5.chr13 1358494 0 - 111193037 C e rheMac8.chr13 1386221 0 + 108979918 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=5588.000000 s hg38.chr2_KI270774v1_alt 63595 10 + 223625 aaaaaaaaaa- s panTro5.chr2A 1340875 10 + 111504155 aaaaaaaaaa- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1301334 10 + 114371477 aaaaaaaaaa- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1326217 10 + 1464242 aaaaaaaaaa- i gorGor5.CYUI01015607v1 C 0 C 0 s dasNov3.JH576208 1623083 10 + 4416731 -GAAAACAAAT i dasNov3.JH576208 I 35 C 0 e aotNan1.NW_018513311v1 68670 0 + 287728 C e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1187198 0 - 7082604 C e cebCap1.NW_016107827v1 1279442 0 + 1864846 C e otoGar3.GL873658 914455 0 + 5252280 C e calJac3.chr14 1337684 0 - 108792865 C e colAng1.NW_012118821v1 1324189 0 - 13651311 C e manLeu1.NW_012103754v1 889137 0 - 2200435 C e chlSab2.chr14 1412979 0 - 107702431 C e cerAty1.NW_012000820v1 1340434 0 - 10304083 C e macNem1.NW_012011978v1 1386985 0 + 3644372 C e macFas5.chr13 1358494 0 - 111193037 C e rheMac8.chr13 1386221 0 + 108979918 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=2255.000000 s hg38.chr2_KI270774v1_alt 63605 2 + 223625 aG s panTro5.chr2A 1340885 2 + 111504155 aG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1301344 2 + 114371477 aG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1326227 2 + 1464242 aG i gorGor5.CYUI01015607v1 C 0 C 0 s otoGar3.GL873658 914455 2 + 5252280 AG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1623093 2 + 4416731 GG i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 68670 0 + 287728 C e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1187198 0 - 7082604 C e cebCap1.NW_016107827v1 1279442 0 + 1864846 C e calJac3.chr14 1337684 0 - 108792865 C e colAng1.NW_012118821v1 1324189 0 - 13651311 C e manLeu1.NW_012103754v1 889137 0 - 2200435 C e chlSab2.chr14 1412979 0 - 107702431 C e cerAty1.NW_012000820v1 1340434 0 - 10304083 C e macNem1.NW_012011978v1 1386985 0 + 3644372 C e macFas5.chr13 1358494 0 - 111193037 C e rheMac8.chr13 1386221 0 + 108979918 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=2661.000000 s hg38.chr2_KI270774v1_alt 63607 2 + 223625 TC s panTro5.chr2A 1340887 2 + 111504155 TC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1301346 2 + 114371477 TC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1326229 2 + 1464242 TC i gorGor5.CYUI01015607v1 C 0 C 0 s aotNan1.NW_018513311v1 68670 2 + 287728 TC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 914457 2 + 5252280 TG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1623095 2 + 4416731 TC i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1187198 0 - 7082604 C e cebCap1.NW_016107827v1 1279442 0 + 1864846 C e calJac3.chr14 1337684 0 - 108792865 C e colAng1.NW_012118821v1 1324189 0 - 13651311 C e manLeu1.NW_012103754v1 889137 0 - 2200435 C e chlSab2.chr14 1412979 0 - 107702431 C e cerAty1.NW_012000820v1 1340434 0 - 10304083 C e macNem1.NW_012011978v1 1386985 0 + 3644372 C e macFas5.chr13 1358494 0 - 111193037 C e rheMac8.chr13 1386221 0 + 108979918 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=31538.000000 s hg38.chr2_KI270774v1_alt 63609 4 + 223625 TATT s panTro5.chr2A 1340889 4 + 111504155 TATT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1301348 4 + 114371477 TATT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1326231 4 + 1464242 TATT i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1386221 4 + 108979918 TATT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1358494 4 - 111193037 TATT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1386985 4 + 3644372 TATT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1340434 4 - 10304083 TATT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1412979 4 - 107702431 TATT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 889137 4 - 2200435 TATT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1337684 4 - 108792865 TATT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1187198 4 - 7082604 TATT i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 68672 4 + 287728 TGTT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 914459 4 + 5252280 TATT i otoGar3.GL873658 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e cebCap1.NW_016107827v1 1279442 0 + 1864846 C e dasNov3.JH576208 1623097 0 + 4416731 C e colAng1.NW_012118821v1 1324189 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=651729.000000 s hg38.chr2_KI270774v1_alt 63613 87 + 223625 TTATAATTTCCTTAAGATAGCCATATAATGTTAGAGTAAAACAAATGGTCATGTTCATCATTATATTCTAA--AAAAAAATTCTATATT s panTro5.chr2A 1340893 86 + 111504155 TTATAATTTCCTTAAGATAGCCATATAATGTTAGAGTAAAACAAATGGTCATGTTCATCATTATATTCT-A--AAAAAAATTCTATATT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1301352 86 + 114371477 TTATAATTTCCTTAAGATAGCCATATAATGTTAGAGTAAAACAAATGGTCATGTTCATCATTATATTCT-A--AAAAAAATTCTATATT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1326235 87 + 1464242 TTATAATTTCCTTAAGATAGCCATATAATGTTAGAGTAAAACAAATGGTCATGTTCGTCATTATATTCTAA--AAAAATATTCTATATT i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1386225 86 + 108979918 TTATAATTTCCTTAAGATAGCCATATAATATTAGAGTAAAACAAACGGTCATGTTCATCATTATATTCT-G--AAAAAAAGTCTATATT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1358498 86 - 111193037 TTATAATTTCCTTAAGATAGCCATATAATATTAGAGTAAAACAAACGGTCATGTTCATCATTATATTCT-G--AAAAAAAGTCTATATT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1386989 86 + 3644372 TTATAATTTCCTTAAGATAGCCATATAATATTAGAGTAAAACAAACGGTCATGTTCATCATTATATTCT-G--AAAAAAAGTCTATATT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1340438 86 - 10304083 TTATAATTTCCTTAAGATAGCCATATAATATTACAGTAAAACAAACCGTCATGTTCATCATTATATTCT-G--AAAAAAATTCTATATT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1412983 88 - 107702431 TTATAATTTCCTTAAGATGGCCATATAATATTAGAGTAAAACAAACGGTCATGTTCATCATTATATTCT-GAAAAAAAAAATCTGTATT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 889141 86 - 2200435 TTATAATTTCCTTAAGATAGCCATATCATATTAGAGTAAAACAAATGGTCATGTTCATCATTATATTCT-G--AAAAAAATTCTATATT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1337688 85 - 108792865 TTATAATTTCCTTAAGATAGGTATCTAACATTAGAGTAAAACAAATGGTCATGTTCAGCATTATATTC--T--TAAAAAAATCTATATT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1187202 85 - 7082604 TTATAATTTCCTTAAGATAGCTATCTAATTTTAGAGTAAAACAAATGGTCATGTTCAGCATTATATTC--T--TTTAAAAATCTATATT i saiBol1.JH378218 C 0 M 1379 s cebCap1.NW_016107827v1 1279442 86 + 1864846 TTATAATTTCCTTAAGATAGCTATCTAATATTAGAGTAAAATAAATGGTCATGTTCAGCATTATATTCT-T--TAAAAAAATCTATATT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 68676 86 + 287728 TTATAATTTCCTTAAGATAGCTATCTAATATTAGAGTAAAACAAGTGGTCATGTTCAGCATTATATTCT-T--TAAAAAAATCTATATT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 914463 80 + 5252280 CCATGATTTCCTTAGGGTAGCTGTCTGATATT------AAACGAATGGTCATGTCCGTCATTCTGGTCT-A--CCCAAGAAACTGTGTT i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1623097 43 + 4416731 -----------------------------------------CAAATGGTTGTACTCATCATGATATTAT-A--ACAGAAA--CCATATT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e colAng1.NW_012118821v1 1324189 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=1444152.000000 s hg38.chr2_KI270774v1_alt 63700 230 + 223625 TGAAGCATTTGTTACTAACAGAATGTCTCTCTTGATATGGAAACTCATGATGAAAAGAAAATAGTAAATAAATTGTTCCAGTTTTACACTCCCCAGTTTTCAGCAATTTACCTAAAAACTGAAGTGACACAATCAC-AGCCCCCAGCTGAGTTAGAACAG--------GC---------TCATTCAATGGGCTAGATGTTTCCATAAGGATAGGTCTCATCTGG-----AAAAAATAAACATATCCAGAAGAG s panTro5.chr2A 1340979 230 + 111504155 TGAAGCATTTGTTACTAACAGAATGTCTCTCTTGATACGGAAACTCATGATGAAAAGAAAATAGTAAATAAATTGTTCCAGTTTTACACTCCCCAGTTTTCAGCAATTTACCTAAAAACTGAAGTGACACAATCAC-AGCCCCCAGCTGAGTTAGAACAG--------GC---------TCATTCAATGGGCTAGATGTTTCCATAAGGATAGGTCTCATCTGG-----AAAAAATAAACATATCCAGAAGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1301438 230 + 114371477 TGAAGCATTTGTTACTAACAGAATGTCTCTCTTGATACGGAAACTCATGATGAAAAGAAAATAGTAAATAAATTGTTCCAGTTTTACACTCCCCAGTTTTCAGCAATTTACCTAAAAACTGAAGTGACACAATCAC-AGCCCCCAGCTGAGTTAGAACAG--------GC---------TCATTCAATGGGCTAGATGTTTCCATAAGGATAGGTCTCATCTGG-----AAAAAATAAACATATCCAGAAGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1326322 230 + 1464242 TGAAGCATTTGTTACTAACAGAATGTCTCTCTTGATATGGAAACTCATGATGAAAAGAAAATAGTAAATAAATTGTTCCAGTTTTACACTCCCCAGTTTTCAGCAATTTACCTAAAAACTGAAGTGACACAATCAC-AGCCCCCAGCTGAGTTAGAACAG--------GC---------TCATTCAATGGGCTAGATGTTTCCATAAGGATAGGTCTCATCTGG-----AAAAAACAAACATATCCAGAAGAG i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1386311 190 + 108979918 TGAGGCATTTGTTACTATCAGAATGTCTCTCCTGATACGGGAACACATGATGAAAAGAAAATAGTAAATAAATTGAT---------------CCAGTTTTC-------------------------ACACAATCAC-AGCCCCCAGCTGAGTTAGGACAG--------GC---------TCATTCAACGGGCTAGATGCTTCCATAAGGATAGGTCTCCTCCGG-----AAAAACCAAACATATCCAGAAGAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1358584 190 - 111193037 TGAGGCATTTGTTACTATCAGAATGTCTCTCCTGATACGGGAACACATGATGAAAAGAAAATAGTAAATAAATTGAT---------------CCAGTTTTC-------------------------ACACAATCAC-AGCCCCCAGCTGAGTTAGGACAG--------GC---------TCATTCAACGGGCTAGATGCTTCCATAAGGATAGGTCTCCTCCGG-----AAAAAGCAAACATATCCAGAAGAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1387075 190 + 3644372 TGAGGCATTTGTTACTATCAGAATGTCTCTCCTGATACGGGAACACATGATGAAAAGAAAATAGTAAATAAATTGAT---------------CCAGTTTTC-------------------------ACACAATCAC-AGCCCCCAGCTGAGTTAGGACAG--------GC---------TCATTCAATGGGCTAGATGCTTCCATAAGGATAGGTCTCCTCCGG-----AAAAAGCAAACATATCCAGAAGAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1340524 205 - 10304083 TGAGGCATTTGTTACTATCAGAATGTCTCTCCTGATACGGGAACTCATGATGAAAAGAAAATAGCAAATAAATTGATCCAGTTTTACACTCCCCAGTTTTC-------------------------ACACAATCAC-AGCCCCCAGCTGATTTAGGACAG--------GC---------TCATTCAATGGGCTAGATGCTTCCATAAGGATAGGTCTCATCCGG-----AAAAAGCAAACATATCCAGAAGAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1413071 204 - 107702431 TGAGGCATTTGTTACTATCAGAATGTCTTTCCTGACACAGGAACTCATGATGAAAAGAAAATAGTAAATAAATTGATCCAGTTTTACACTCCCCAGTTTTC-------------------------ACACAATCAC-AGCCCCCAGCTGAGTTAGGACAG--------GC---------TCATTCAA-GGGCTAGATGCTTCCATAAGGATAGGTCTCCTCTGG-----AAAAAACAACCATGTCCAGAAGAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 889227 205 - 2200435 TGAGGCATTTGTTACTATCAGAATGTCTCTCCTGATACGGGAACTCATGATGAAAAGAAAATAGTAAATAAATTGATCCAGTTTTACACTCCCCAGTTTTC-------------------------ACACAATCAC-AGCCCCCAGCTGAGTTAGGACAG--------GC---------TCATTCAACGGGCTAGATGCTTCCATAAGGATAGGTCTCATCCGG-----AAAAAGCAAACATATCCAGAAGAG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1337773 228 - 108792865 TGAGGCATTTGTTACTATCAGAATGTCTCTCCTGATACTGAAACTCACGATTAAAAGAAAATAGTAAATCAATTGTTTCAGTTTTAGACTGCCCAATTTTCAGCAATTTACCCAAGAACTGGGGTA--ACAATCAC-AGCCCCCAACTGGGTTAGAACAG--------GC---------TTGTGCAATGGGCTAGATGCTTCCGTAAGAATAGGTCTTATCAGG-----AAAACCTAAGCATTTCCAGAAGAG i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1279528 233 + 1864846 TGAGGCAGTTGTTACTATCAGAATGTCTCTCCTGATACTGAAACTCACGATTAAAAGAAAATAGTAAATAAATTGTTCCAGTTTTATACTACCCAATTTTCAGCAATTTACCCAAGAACTGAAGTAACACAATCAA-AGCCCCCAACTGAGTTAGAACAG--------GC---------TTATGCAATGGGCTAGATGCTTCCATAAGAATAGGTCTCATCAGG--AAAAAAAAAAAAGCATTTCCAGAAGAG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 68762 230 + 287728 TGAGGCATTTGTTACTATCAGAGTGTCTCTCCTGATACCGAAACTCACGATTAAAAGAAAATAGTAAATAAATTGTTCCAGTTTTATACTACCCAGTTTTCAGCAATTTACCCAAGAACTGAAGTAACACAATCGC-AGCCCCTAACCGAGTCAGAACAG--------GC---------TTATGCAATGGGCTAGATGCTTCCATAAGAATAGGTCTTATCAGG-----AAAAAACAAGCATACCCAGAAGAG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 914543 238 + 5252280 TGAGGCATTTGTTACT---AGGATGTCTCTCTGGATATTACAGCTCTTCAGTGAGTGGAAATAGTACATTAATTGTTCAAGTTTTACACTACATGATTTTCAGCAATTTACCTAAGAACTAAAGTAACAAAACCAC-AGCCC--AAGTGGGTTAGAACAGCCATCATTCC---------TTATCCAACAGAGTAGATGGTTCCAGGAGAATGGGCCTCACTTAGGAGAAAGAAAATAAACATATCTAGAAGAG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1623140 241 + 4416731 TGTAGCATTTGTCACTATCAGGATGCTTCTCCAGATACCAGAGCTCATCATTAAAGGAAAATAGAAGGTTGATTATTCTTGTTTTATACTAGCCAATGCCCAGCAATAAACTCAATAAAGCAAACCATGCAACCACGATTTCCCAAAAGAATTAGAATCG--------ACTGTCCATATTTAATCAATAGAGTCAATATTTAAATGAAAACAGATCTCATCTGG----AAAAAAATAAACATATCTAGAAGAG i dasNov3.JH576208 C 0 I 44 e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1187287 1379 - 7082604 M e colAng1.NW_012118821v1 1324189 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=17159.000000 s hg38.chr2_KI270774v1_alt 63930 3 + 223625 AGA s panTro5.chr2A 1341209 3 + 111504155 AGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1301668 3 + 114371477 AGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1326552 3 + 1464242 AGA i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1386501 3 + 108979918 AGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1358774 3 - 111193037 AGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1387265 3 + 3644372 AGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1340729 3 - 10304083 AGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1413275 3 - 107702431 AGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 889432 3 - 2200435 AGG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1338001 3 - 108792865 AGA i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1279761 3 + 1864846 AGA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 68992 3 + 287728 AGA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 914781 3 + 5252280 ATA i otoGar3.GL873658 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1187287 1379 - 7082604 M e dasNov3.JH576208 1623381 44 + 4416731 I e colAng1.NW_012118821v1 1324189 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=739014.000000 s hg38.chr2_KI270774v1_alt 63933 118 + 223625 Atgcattaggctgttcttgcattgctataaagaaatacctgagactgagtaatttataagaaaataggcttaactggctcacagttctgcaggctgtttaggaagcatggtggcatct s panTro5.chr2A 1341212 118 + 111504155 Atgcattaggctgttcttgcattgctataaagaaatacctgagactgagtaatttataagaaaataggcttaactggctcacagttctgcaggctgtttaggaagcatggtggcatct i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1301671 118 + 114371477 Atgcattaggctgttcttgcattgctataaagaaatacctgagactgagtaatttataagaaaataggcttaactggctcacagttctgcaggctgtttaggaagcatggtggcatct i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1326555 118 + 1464242 Atgcattaggctgttcttgcattgctataaagaaatacctgagactgagtaatttataagaaaataggcttaactggctcacagttctgcaggctgtgtaggaagcatggtggcatct i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1386504 118 + 108979918 Atgtcttaggctgttcttgcattgctataaagaaatacctgagactgagtaatttatgagaaaataggcttaaccgactcacagttctgcaggctgtgtaggaagcgtggtggtatcc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1358777 118 - 111193037 Atgtcttaggctgttcttgcattgctataaagaaatacctgagactgagtaatttatgagaaaataggcttaaccggctcacagttctgcaggctgtgtaggaagcatggtggtatcc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1387268 118 + 3644372 Atgtcttaggctgttcttgcattgctataaagaaatacctgagactgagtaatttatgagaaaataggcttaaccggctcacagttctgcaggctgtgtaggaagcgtggtggtatcc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1340732 118 - 10304083 Atgtcttaggctgttcttgcattgctataaagaaatacctgagactgagtaatttatgagaaaacaggcttaaccggctcacagttctgcaggctgtgtaggaagcgtggtggtgtcc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1413278 118 - 107702431 Atgtcttaggctgttcttgcattgctataaagaaatacctgagactgaataatttatgagaaaataggcttaaccggctcacagttctgcaggctgtgtagaaaacatggtggtatct i chlSab2.chr14 C 0 I 151 s manLeu1.NW_012103754v1 889435 118 - 2200435 Atgtcttaggctgttcttgcattgctataaagaaatacctgagactgagtaatttatgagaaaataggcttaaccagctcacagttctgcaggctgtgtaggaagcgtgttggtgtcc i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1338004 118 - 108792865 Atgtattcggctattcctgctttgctataaagaaacacctgagactgagtaacttataagaagagaagtttaactggctcacgattctgcaggccatataggaagcagggtggcttct i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1279764 115 + 1864846 Atgtattaggctattcttgctttgctgt-aagaaatacctgaggctgagtaatttataagaagag--gtttaactggttcacagttctgcaggctgtgtagggagcatggtggcttct i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 68995 118 + 287728 Atgtattaggctgttcttgctttgctaaaaagaaatacctgagactgagtaatttataagaagagaggtttaactggctcacagttctgcaggctgtgcagcaagcatggtggcttct i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1187287 1379 - 7082604 M e otoGar3.GL873658 914784 0 + 5252280 C e dasNov3.JH576208 1623381 44 + 4416731 I e colAng1.NW_012118821v1 1324189 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=594658.000000 s hg38.chr2_KI270774v1_alt 64051 91 + 223625 gcttctatggaggcctcaggaagcttccaatcctgggggaaggcagagggtaagcaggtgtctcacatggtgggggcaggagcaagagaaa s panTro5.chr2A 1341330 91 + 111504155 gcttctatggaggcctcaggaagcttccaatcctgggggaaggcagagggtaagcaggtgtctcacatggtgggggcaggagcaagagaaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1301789 91 + 114371477 gcttctatggaggcctcaggaagcttccaatcctgggggaaggcagagggtaagcaggtgtctcacatggtgggggcaggagcaagagaaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1326673 91 + 1464242 gcttctatggaggcctcaggaagcttccaatcctgggggaaggcagaggataagcaggtgtctcacatggtgggggcaggagcaagagaaa i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1386622 90 + 108979918 gcttttatggaggcctcaggaagcttccaatcct-ggggatggcagaggggaagcaggtgtctcacatggtgggggcaggagcaagagaaa i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1358895 90 - 111193037 gcttttatggaggcctcaggaagcttccaatcct-ggggatggcagaggggaagcaggtgtctcacatggtgggggcaggagcaagagaaa i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1387386 90 + 3644372 gcttttatggaggcctcaggaagcttccaatcct-ggggatggcagaggggaagcagatgtctcacatggtgggggcaggagcaagagaaa i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1340850 90 - 10304083 gcttctatggaggcctcaggaagcttccaatcct-ggggacggcagaggggaagcaggtgtctcacatggtggggacaggagcaagagaaa i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1413547 90 - 107702431 gcttctatggaggcctcaggaagcttccaatcct-ggggacggcagaggggaagcaggtgtctcacatggtgggggcaggagcaagagaaa i chlSab2.chr14 I 151 C 0 s manLeu1.NW_012103754v1 889553 90 - 2200435 acttctatggaggcctcaggaagcttccaatcct-ggggacggcagaggggaagcaggtgtctcacatggtgggggcaggagcaagagaaa i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1338122 91 - 108792865 gcttctatggaagcctcaggaagcttccaatcctggaggaaggcagagggtaagcaggcatctcgcatggtgggggcaggcgcaagagaaa i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1279879 89 + 1864846 gcttctatggaagcctcaggaagcttccaatcctaggggaag--agagggtaagctggcgtcccacatggtgggggcaggcacaagagaaa i cebCap1.NW_016107827v1 C 0 I 138 s aotNan1.NW_018513311v1 69113 91 + 287728 gcttctatggaagcctcaggaagcttccaatcctgggggaaggcagagggtaagcaggcgtctcacatggtgggggcaggcacaggagaaa i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1187287 1379 - 7082604 M e otoGar3.GL873658 914784 0 + 5252280 C e dasNov3.JH576208 1623381 44 + 4416731 I e colAng1.NW_012118821v1 1324189 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=6006.000000 s hg38.chr2_KI270774v1_alt 64142 1 + 223625 a s panTro5.chr2A 1341421 1 + 111504155 a i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1301880 1 + 114371477 a i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1326764 1 + 1464242 a i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1386712 1 + 108979918 a i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1358985 1 - 111193037 a i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1387476 1 + 3644372 a i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1340940 1 - 10304083 a i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1413637 1 - 107702431 a i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 889643 1 - 2200435 a i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1338213 1 - 108792865 a i calJac3.chr14 C 0 C 0 s aotNan1.NW_018513311v1 69204 1 + 287728 a i aotNan1.NW_018513311v1 C 0 I 14 e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1187287 1379 - 7082604 M e cebCap1.NW_016107827v1 1279968 138 + 1864846 I e otoGar3.GL873658 914784 0 + 5252280 C e dasNov3.JH576208 1623381 44 + 4416731 I e colAng1.NW_012118821v1 1324189 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=56553.000000 s hg38.chr2_KI270774v1_alt 64143 16 + 223625 caaagtgagaggaggt s panTro5.chr2A 1341422 16 + 111504155 caaggcgagaggaggt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1301881 16 + 114371477 caaggcgagaggaggt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1326765 16 + 1464242 caaggtgagaggaggt i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1386713 16 + 108979918 tgaggcgacaggaggt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1358986 16 - 111193037 tgaggcgacaggaggt i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1387477 16 + 3644372 tgaggcgacaggaggt i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1340941 16 - 10304083 tgaggcaacaggaggt i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1413638 16 - 107702431 tgaggcgacaggaggt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 889644 16 - 2200435 tgaggcgacaggaggt i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1338214 14 - 108792865 tgagggg--ggaaggt i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 69205 14 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1187287 1379 - 7082604 M e cebCap1.NW_016107827v1 1279968 138 + 1864846 I e otoGar3.GL873658 914784 0 + 5252280 C e dasNov3.JH576208 1623381 44 + 4416731 I e colAng1.NW_012118821v1 1324189 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=38880.000000 s hg38.chr2_KI270774v1_alt 64159 9 + 223625 gccatagac s panTro5.chr2A 1341438 9 + 111504155 gccatagac i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1301897 9 + 114371477 gccatagac i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1326781 9 + 1464242 gccatagac i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1386729 9 + 108979918 gccatagac i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1359002 9 - 111193037 gccatagac i macFas5.chr13 C 0 I 148 s macNem1.NW_012011978v1 1387493 9 + 3644372 gccatagac i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1340957 9 - 10304083 gccatagac i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1413654 9 - 107702431 gccatagac i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 889660 9 - 2200435 gccatagac i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 69205 14 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1187287 1379 - 7082604 M e cebCap1.NW_016107827v1 1279968 138 + 1864846 I e otoGar3.GL873658 914784 0 + 5252280 C e dasNov3.JH576208 1623381 44 + 4416731 I e calJac3.chr14 1338228 0 - 108792865 C e colAng1.NW_012118821v1 1324189 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=25806.000000 s hg38.chr2_KI270774v1_alt 64168 9 + 223625 tATATAT------AT s panTro5.chr2A 1341447 9 + 111504155 tATATAT------AT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1301906 9 + 114371477 tATATAT------AT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1326790 9 + 1464242 tATATAT------AT i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1386738 9 + 108979918 tatatat------at i rheMac8.chr13 C 0 I 142 s macFas5.chr13 1359159 9 - 111193037 tatatat------at i macFas5.chr13 I 148 C 0 s macNem1.NW_012011978v1 1387502 9 + 3644372 tatatat------at i macNem1.NW_012011978v1 C 0 I 205 s cerAty1.NW_012000820v1 1340966 9 - 10304083 tacacac------ac i cerAty1.NW_012000820v1 C 0 I 30 s chlSab2.chr14 1413663 9 - 107702431 tATATAT------ac i chlSab2.chr14 C 0 I 22 s manLeu1.NW_012103754v1 889669 15 - 2200435 tATATATATATacac i manLeu1.NW_012103754v1 C 0 I 22 e aotNan1.NW_018513311v1 69205 14 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1187287 1379 - 7082604 M e cebCap1.NW_016107827v1 1279968 138 + 1864846 I e otoGar3.GL873658 914784 0 + 5252280 C e dasNov3.JH576208 1623381 44 + 4416731 I e calJac3.chr14 1338228 0 - 108792865 C e colAng1.NW_012118821v1 1324189 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=16390.000000 s hg38.chr2_KI270774v1_alt 64177 15 + 223625 GCACtttaatttctg s panTro5.chr2A 1341456 15 + 111504155 GCACtttaatttctg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1301915 15 + 114371477 GCACtttaatttctg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1326799 15 + 1464242 GCACtttaatttctg i gorGor5.CYUI01015607v1 C 0 C 0 s macFas5.chr13 1359168 15 - 111193037 acactttaatttctg i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1341005 8 - 10304083 acacttta------- i cerAty1.NW_012000820v1 I 30 C 0 s chlSab2.chr14 1413694 8 - 107702431 acacttta------- i chlSab2.chr14 I 22 C 0 s manLeu1.NW_012103754v1 889706 8 - 2200435 acacttta------- i manLeu1.NW_012103754v1 I 22 C 0 e aotNan1.NW_018513311v1 69205 14 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1187287 1379 - 7082604 M e cebCap1.NW_016107827v1 1279968 138 + 1864846 I e otoGar3.GL873658 914784 0 + 5252280 C e dasNov3.JH576208 1623381 44 + 4416731 I e calJac3.chr14 1338228 0 - 108792865 C e colAng1.NW_012118821v1 1324189 0 - 13651311 C e macNem1.NW_012011978v1 1387511 205 + 3644372 I e rheMac8.chr13 1386747 142 + 108979918 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=108424.000000 s hg38.chr2_KI270774v1_alt 64192 38 + 223625 atttctggggcacatgtgctgaacgtgcaggtttgtta s panTro5.chr2A 1341471 38 + 111504155 atttctggggcacatgtgctgaacgtgcaggtttgtta i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1301930 38 + 114371477 atttctggggcacatgtgctgaacgtgcaggtttgtta i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1326814 38 + 1464242 atttctggggcacatgtgctgaacgtgcaggtttgtta i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1386889 38 + 108979918 atttctgggatacatgtgtagaacgtgcaggtttgtta i rheMac8.chr13 I 142 C 0 s macFas5.chr13 1359183 31 - 111193037 -------ggatacatgtgtagaacgtgcaggtttgtta i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1341013 38 - 10304083 atttctgtgatacatgtgtagaacgtgcaggtttgtta i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1413702 38 - 107702431 atctctgggatacatgtgtagaacgtgcaggtttgtta i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 889714 38 - 2200435 atttctgggatacatgtgtagaacgtgcaggtttgtta i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 69205 14 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1187287 1379 - 7082604 M e cebCap1.NW_016107827v1 1279968 138 + 1864846 I e otoGar3.GL873658 914784 0 + 5252280 C e dasNov3.JH576208 1623381 44 + 4416731 I e calJac3.chr14 1338228 0 - 108792865 C e colAng1.NW_012118821v1 1324189 0 - 13651311 C e macNem1.NW_012011978v1 1387511 205 + 3644372 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=1371321.000000 s hg38.chr2_KI270774v1_alt 64230 370 + 223625 tataggtatacacgtgccatggtggtttgctgcacccatcaaggtaataccattcaggacataggcatgggcaaagacttcgtgactaaaacaccaaaagcaatggcaattaaagccagaattgac-aaatgggatctg-----attaaagagcttc-tgcacagcaaaagaaactatc-atcagagtgaacaggcaacctacataatgggagaaaatttttgcaatctagccatctgacaaagggctaatatccagaatct-----------acaaagaacttaaatttacaagaaaaaaac-aaccccatcaaaaagtgggtgaaggatatgaacagacacttctcaaaagaagacattcatgcagccaaaggacatatg--aaaagaaa s panTro5.chr2A 1341509 369 + 111504155 tataggtatacacgtgccatggtggtttgctgcacccatcaaGATAAtaccattcaggacataggcatgggcaaagacttcatgactaaaacaccaaaagcaatggcaataaaagccagaattcac-aaatgggatctg-----attaaaaagcttc-tgcacagcaaaagaaactatc-atcagagtgaacaggcaacctacataatgggagaaaatttttgcaatctatccatctgacaaagggctaatatccagaatct-----------acaaagaacttaaatttacaagaaaaaaa--aaccccatcaaaaagtgggtgaagggtatgaacagacacttctcaaaagaagacattcatgcagccaaaggacatatg--aaaaaaaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1301968 370 + 114371477 tataggtatacacgtgccatggtggtttgctgcacccatcaaGATAAtaccattcaggacataggcatgggcaaagacttcatgactaaaacaccaaaagcaatggcaataaaagccagaattcac-aaatgggatctg-----attaaaaagcttc-tgcacagcaaaagaaactatc-atcagagtgaacaggcaacctacataatgggagaaaatttttgcaatctatccatctgacaaagggctaatatccagaatct-----------acaaagaacttaaatttacaagaaaaaaac-aaccccatcaaaaagtgggtgaaggatatgaacagacacttctcaaaagaagacattcatgcagccaaaggacatatg--aaaaaaaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1326852 370 + 1464242 tataggtatacatgtgccatggtggtttgccgcacccatcaaggtaataccattcatgacataggcatgggcaaagacttcatgactaaaacaccaaaagcaatggcaataaaagccagaattgac-aaatgggatctg-----attaaagagcttc-tgcacagcaaaagaaactatc-atcagagtgaacaggcaacctacataatgggagaaaatttttgcaatctatccatctgacaaagggctaatatccagaatct-----------acaaagaacttaaatttacaagaaaaaaac-aaccccatcaaaaagtgggtgaaggatatgaacagacacttctcaaaagaagacattcatgcagccaaaggacatatg--aaaagaaa i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1386927 371 + 108979918 tgtaggtatacacgtgccatggtggtttgctgcacctatcaaggtaatgccattcaattcataggcataggcaaagatttcatgactaaaacaccaaaagcaatgacaacaaaagccaaaattgac-aaatgggatctc-----actaaagaacttc-tgcacagcaaaagaaactatc-atcagagtgaacaggcaacctacggaatgggagaaaatttttgcaatctatccatctgacaaagggctaacatccagaatct-----------acaaagaacttaaatttacaagaaaaagac-aaccccatcaaaaagaaggcaaaggatatgaacagacacttctcaaaaaaagacacttatgcatccaacaaacatatg-aaaaaaGAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1359214 371 - 111193037 tgtaggtatacacgtgccatggtggtttgctgcacctatcaaggtaatgccattcaattcataggcataggcaaagatttcatgactaaaacaccaaaagcaatgacaacaaaagccaaaattgac-aaatgggatctc-----actaaagaacttc-tgcacagcaaaagaaactatc-atcagagtgaacaggcaacctacggaatgggagaaaatttttgcaatctatccatctgacaaagggctaacatccagaatct-----------acaaagaacttaaatttacaagaaaaagac-aaccccatcaaaaagaaggcaaaggatatgaacagacacttctcaaaaaaagacacttatgcatccaacaaacatatg-aaaaaaGAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1387716 382 + 3644372 tatgggtatacacgtgccatggtggtttgctgcacctatcaaggtaatgccattcaattcataggcaaaggcaaagatttcatgactaaaacaccaaaagcaatgacaacaaaagccaaaattgacaaaatgggatctc-----actaaagaacttcttgcacagcaaaagaaactatcgatcagagtgaacaggcaacctacggaatgggagaaaatttttgcaatctatccatctgacaaagggc--aaatccagaatctttaattacaagaaaaagaactt-aatttacaagaaaaagacaaaccccatcaaaaagaaggcaaaggatatgaacagacacttctcaaaaaaagacacttatgcatccaacaaacatatg--aaaaagaA i macNem1.NW_012011978v1 I 205 C 0 s cerAty1.NW_012000820v1 1341051 371 - 10304083 tgtaggtatacacgtgccatggtggtttgttgcacctatcaaggtaatgccattcagttcataggcatgggcaaagatttcatgactaaaacaccaaaagcaatgacaacaaaagccaaaattgac-aaatgggatctc-----actaaagaacttc-tgcacagcaaaagaaactatc-atcagagtgaacaggcaacctacggaatgggagaaaatttttgcaatctatccatctgacaaagggctaacatccagaatct-----------acaaagaagttaaatttacaagaaaaagac-aaccccatcaaaaagaaggcaaaggatatgaacagacatttctcaaaagaagatacttatgcatccaacaaacatatg-aaaaaaGAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1413740 376 - 107702431 tgtaggtatacacgtgccatggtggtttgctgcacctatcaaggtaatgccattcagttcataggcatgggcaaagatttcacgactaaaacaccaaaagcaatgacaacaaaagccaaaactgac-aaatgggatctcgttaaactaaagaacttc-tgcacaacaaaagaaactatc-atcagagtgaacaggcatcctacggaatgggagaaaatttttgcaatctatccatctgacaaagggctaatatccagaatct-----------acaaagaacttaaatttacaagaaaaagac-aaccccatcaaaaagaaggcaaaggatatgaacagacacttctcaaaaaaagacacttatgcatccaacaaacatatg-aaaaaaAAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 889752 372 - 2200435 tgtaggtatacacgtgccatggtggtttgctgcacctatcaaggtgatgccattcagttcataggcatgggcaaagatttcatgactaaaacaccaaaagcaatgacaataaaagccaaaattgac-aaatgggatctc-----actaaagagcttc-tgcacagcaaaagaaactatc-atcagagtgaacaggcaacctacggaatgggagaaaatttttgcaatctatccatctgacaaagagctaacatccagaatct-----------acaaagaacttaaatttacaagaaaaagac-aaccccatcaaaaagaaggcaaaggatatgaacagacacttctcaaaaaaagacacttatgcatccaacaaacataagaaaaaaAAAA i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 69205 14 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1187287 1379 - 7082604 M e cebCap1.NW_016107827v1 1279968 138 + 1864846 I e otoGar3.GL873658 914784 0 + 5252280 C e dasNov3.JH576208 1623381 44 + 4416731 I e calJac3.chr14 1338228 0 - 108792865 C e colAng1.NW_012118821v1 1324189 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=657601.000000 s hg38.chr2_KI270774v1_alt 64600 130 + 223625 gccatagacttttaaacaatcagatctcataagaattcaccatcctgagaacagcaacgagggggtggtgccagatactacctgagaatccacccatgatcccatcacctccacccaggcccctcctcca s panTro5.chr2A 1341878 130 + 111504155 gccatagacttttaaacaatcagatctcataagaattcaccatcctgagaacagcaacgagggggtggtgccagatactacctgagaatccacccatgatcccatcacctccacccaggcccctcctcca i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1302338 130 + 114371477 gccatagacttttaaacaatcagatctcataagaattcaccatcctgagaacagcaatgagggggtggtgccagatactacctgagaatccacccatgatcccatcacctccacccaggcccctcctcca i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1327222 130 + 1464242 gccatagacttttaaacaatcagatctcataagaattcaccatcctgagaacagcaacgagggggtggtgccagatactacctgagaatccacccatgatcccatcacctccacccaggcccctcctcca i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1387298 130 + 108979918 gccatagacttttaaacaaccaaatctcataagaactcaccatcctgagaacagcaacgagggggtggtgccagactctacctgagaatccacccatgatcccatcacctcccaccaggcccctcctcca i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1359585 130 - 111193037 gccatagacttttaaacaaccaaatctcataagaactcaccatcctgagaacagcaacgagggggtggtgccagactctacctgagaatccacccatgatcccatcacctcccaccaggcccctcctcca i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1388098 130 + 3644372 gccacagacttttaaacaaccaaatctcataagaactcaccatcctgagaacagcaacgagggggtggcgccagactctacctgagaatccacccatgatcccatcacctcccaccaggcccctcctcca i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1341422 129 - 10304083 gccatagacttttaaacaaccaaatctcataagaactcaccatcctgagaacagcaacga-ggggtggtgccagactctacctgagaatccacccatgatcccatcacctcccaccaggcccctcctcca i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1414116 129 - 107702431 gccataaacttttaaacaaccaaatctcataagaactcaccatcctgagaacagcaacgagggggtggtgccaggctgta-ctgagaatccacccaggatcccatcacctcccaccaggcccctcctcca i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 890124 129 - 2200435 gccatagacttttaaacaaccaaatctcataagaactcaccatcctgagaacagcaacga-ggggtggtgccagactctacctgagaatccacccatgatcccatcacctcccaccaggcccctcctcca i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1338228 108 - 108792865 gctatagacttttaaacaaccagatctcacaggaactcacca---------------------ggtggggccaggccctgcctgagaatccacccttgatccggttacctcccacc-ggccccacctcca i calJac3.chr14 C 0 C 0 s aotNan1.NW_018513311v1 69219 129 + 287728 gccatagacttttagacaaccagatctcacacgaactcgccaccgtgagaacggcacccagcggggtgggccagaccctgcctgagaaaccacccttgatcccgttacctcccacc-ggctccacctcca i aotNan1.NW_018513311v1 I 14 C 0 e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1187287 1379 - 7082604 M e cebCap1.NW_016107827v1 1279968 138 + 1864846 I e otoGar3.GL873658 914784 0 + 5252280 C e dasNov3.JH576208 1623381 44 + 4416731 I e colAng1.NW_012118821v1 1324189 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=294998.000000 s hg38.chr2_KI270774v1_alt 64730 52 + 223625 acactggggatgacatttcaacatgagatttgggcaggaaca-cagaccaaac s panTro5.chr2A 1342008 52 + 111504155 acactggggatgacatttcaacatgagatttgggcaggaaca-cagaccaaac i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1302468 52 + 114371477 acactggggatgacatttcaacatgagatttgggcaggaaca-cagaccaaac i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1327352 51 + 1464242 acact-gggatgacatttcaacacgagatttgggcaggaaca-cagaccaaac i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1387428 52 + 108979918 acactggggatgacatttcaacatgagattcgggcgggaaca-cagaccaaag i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1359715 52 - 111193037 acactggggatgacatttcaacatgagattcgggcgggaaca-cagaccaaag i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1388228 51 + 3644372 acact-gggatgacatttcaacatgagattc-ggcgggaacaccagaccaaag i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1341551 52 - 10304083 acactggggatgacatttcaacccgagatttgggcgggaaca-cagagcaaag i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1414245 52 - 107702431 acactggggatgacatttcaacatgagatttgggcgggaaca-cagaccaaag i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 890253 52 - 2200435 acactggggatgacatttcaacccgagatttgggcgggaaca-cagaccaaag i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1338336 51 - 108792865 acactgggcttggcatttcgacatgagatttggacgggaaca-cagaccaac- i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1280106 51 + 1864846 acactgggcatggcatttcaacatgagatttggacgggaaca-caggccaac- i cebCap1.NW_016107827v1 I 138 C 0 s aotNan1.NW_018513311v1 69348 51 + 287728 acactgggcatggcatttcaacatgagatttggatgggaaca-cagaccaac- i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1187287 1379 - 7082604 M e otoGar3.GL873658 914784 0 + 5252280 C e dasNov3.JH576208 1623381 44 + 4416731 I e colAng1.NW_012118821v1 1324189 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=76504.000000 s hg38.chr2_KI270774v1_alt 64782 11 + 223625 catatcGGACA s panTro5.chr2A 1342060 11 + 111504155 catatcaGACA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1302520 11 + 114371477 catatcaGACA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1327403 11 + 1464242 catatcGGACA i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1387480 11 + 108979918 catatcGGACA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1359767 11 - 111193037 catatcGGACA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1388279 11 + 3644372 catTATCGACA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1341603 11 - 10304083 catatcGGACA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1414297 11 - 107702431 cgtatcGGACA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 890305 11 - 2200435 cgtatcGGACA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1338387 11 - 108792865 catatcaGACA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1188672 11 - 7082604 CATATCAGACA i saiBol1.JH378218 M 1379 C 0 s cebCap1.NW_016107827v1 1280157 11 + 1864846 catatcaGACA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 69399 11 + 287728 catatcaGACA i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e otoGar3.GL873658 914784 0 + 5252280 C e dasNov3.JH576208 1623381 44 + 4416731 I e colAng1.NW_012118821v1 1324189 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=317312.000000 s hg38.chr2_KI270774v1_alt 64793 56 + 223625 ACTTATTTGATAAATCCTTTGCTTTATGTAG-AAAATGTC--AGTCTTAGCTATACTAA s panTro5.chr2A 1342071 56 + 111504155 ACTTATTTGATAAATCCTTTGCTTTATGTAG-AGAATGTC--AGTCTTAGCTATACTAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1302531 56 + 114371477 ACTTATTTGATAAATCCTTTGCTTTATGTAG-AGAATGTC--AGTCTTAGCTATACTAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1327414 56 + 1464242 ACTTATTTGATAAATCCTTTGCTTTATGTAG-AAAATGTC--AGTCTTAGCTATACTAA i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1387491 54 + 108979918 ACTTCTTTGATCAATCCATTGCTTTATGTAGAAAAATGTCAGAGTCTT-----CACTAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1359778 54 - 111193037 ACTTCTTTGATCAATCCATTGCTTTATGTAGAAAAATGTCAGAGTCTT-----CACTAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1388290 51 + 3644372 ACTTC-TTGATCAATCCATTGTCTTATGTAGAAAAATGTC--AGTCTT-----CACTAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1341614 54 - 10304083 ACTTCTTTGATCAATCCATTGCTTTATGTAGAAAAATGTCAGAGTCTT-----CACTAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1414308 52 - 107702431 ACTTCTTTGATAAATCCATTGCTTTATGTAGAAAAATGTC--AGTCTT-----CACTAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 890316 54 - 2200435 ACTTCTTTGATCAATCCATTGCTTTATGTAGAAAAATGTCAGAGTCTT-----CACTAA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1338398 57 - 108792865 GCT-CTTTGATAAATCCATTGCTTTATGTAG-AAAATGTCAGAGTCTTAAGTGCACTAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1188683 58 - 7082604 GCTGATTTGATAAATCCATTGCTTTATGTAG-AAAATGTCAGAGTCTAAAGTGCACTAA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1280168 58 + 1864846 GCTCATTTGATAAATCCATTGCTTTATGTAG-AAAATGTCAGCGTCTTAAGTGCACTAA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 69410 58 + 287728 GCTCATTTGATAAATCCATTGCTTTATGCAG-AAAATGTCAGAGTCTTAAGTGCACTAA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 914784 56 + 5252280 ACTTCTTCCACAAGTCAATTATTATGTGTGG-AAAA--CTAGAGGCTTATGTAGGCTCA i otoGar3.GL873658 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e dasNov3.JH576208 1623381 44 + 4416731 I e colAng1.NW_012118821v1 1324189 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=1099963.000000 s hg38.chr2_KI270774v1_alt 64849 155 + 223625 TAAAATTTTACAGTGTGACAATTTCTTCTTGAAATATGTTTTGTGTTTTAACCCATTG-----ATGTTAACATGAAGATGTGCTATGGGATAAGTGAAGAATTAAATGTGCAAAACCACATCCTTTTAGGAGCTACAGGACCATGTAGTTTGGACATGCG s panTro5.chr2A 1342127 155 + 111504155 TAAAATTTTACAGTATGACAATTTCTTCTTGAAATATGTTTTGTGTTTTAACCCATTG-----ATGTTAACATGAAGATGTGCTATGGGATAAGTGAGGAATTAAATGTGCAAAACCACATCCTTTTAGGAGCTACAGGACCACGCAGTTTGGACATGTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1302587 155 + 114371477 TAAAATTTTACAGTATGACAATTTCTTCTTGAAATATGTTTTGTGTTTTAACCCATTG-----ATGTTAACATGAAGATGTGCTATGGGATAAGTGAGGAATTAAATGTGCAAAACCACATCCTTTTAGGAGCTACAGGACCACGCAGTTTGGACATGTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1327470 155 + 1464242 TAAAATTTTACAGTATGACAATTTCTTCTTGAAATACGTTTTGTGTTTTAACCCATTG-----ATGTTAACATGAAGATGTGCTATGGGATAAGTGAAGAATTAAATGTGCAAAACCACATCCTTTTAGGAGCTACAGGACCACGTAATTTGGACATGCA i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1387545 155 + 108979918 TAAAATTTTATGGTATGATGATTTCTTCTTGAAAGATGTTTCGTGTTTTAACCCATTG-----ATGTTAACACGATGATGTGCTATGGGATAAGTGGAGAATTAAATGTGCAAAATCATATCCTTTTAGGAGCTAAAGGACCACGTAGTTTGGGCATGCG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1359832 155 - 111193037 TAAAATTTTATGGTATGATGATTTCTTCTTGAAAGATGTTTCGTGTTTTAACCCATTG-----ATGTTAACACGATGATGTGCTATGGGATAAGTGGAGAATTAAATGTGCAAAATCATATCCTTTTAGGAGCTAAAGGACCACGTAGTTTGGGCATGCG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1388341 151 + 3644372 TAAAATTTTATGGTATGATGA-TTCTTCTTGAAAGATGTTTCGTGTGTTTAACCAT-------ATGTTAACACGATGATGTGCTATGGGATAAGTGGAGAATTAAATGTGCAAAATCTTATCC-TTTAGGAGCTAAAGGACCACGTAGTTTGTGCATGTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1341668 155 - 10304083 TAAAATTTTATGGTATGATGATTTCTTCTTGAAAGATGTTTCGTGTTTTAACCCATTG-----ATGTTAACATGATGATGTGCTATGGGGTAAGTGGAGAATTAAATGTGCAAAACCATATCCTTTTAGGAGCTAAAGGACCACGTAGTTTGGGCATGCG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1414360 155 - 107702431 TAAAATTTTATGGTATAGTGATTTCTTCTTGAAAGATGTTTCGTGTTTTAACCCATTG-----ATGTTAACATGATGATGTGCTATGGGATAAGTGGAGAATTAAATGTGCAAAACCATATCCTTTTAGGAGCTAAAGGACCACGTAGTTTGGGCCTGCG i chlSab2.chr14 C 0 I 188 s manLeu1.NW_012103754v1 890370 155 - 2200435 TAAAATTTTATGGTATGATGATTTCTTCTTGAAAGATGTTTCGTGTTTTAACCCATTG-----ATGTTAACATGATGATGTGCTATGGGATAAGTGGAGAATTAAACGTGCAAAACCATATCCTTTTAGGAGCTAAAGGACCACGTAGTTTGGGCATGCG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1338455 154 - 108792865 TGAAATTTTACAGTACGTCAGTTTCTTCTTGAAAGATGTTTAGTGTTTTAACCCATTG-----ATGTTAAGATGATGG-GTGCTGTGGGCTAGGTGGAGAATTCACCGTGCAAAGCCACATCCTTTTAGGCGCTAAAGGACAGCGTAGCTTGGGCACGCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1188741 155 - 7082604 TGGAATTTTACAGAATGACAATTTCTTCTTGAAAGCTGTTTAGTGTTTTAGCCTATTG-----ATGTTAAGATGATGGTGTGCTGTGGGCTAGGTGGAGAATTCAATGTGCAAAGCCACATCCTTTTAGGCGCTGAAGGACAGCATAGGTTCAGTACGGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1280226 159 + 1864846 TGAAATTTTACAGTATGTCAATTTCTTCTTGAAAGATGTTTAGTGTTTTAACCCATTGGAAGTGTTTTAAGATGATGGTGTGCTGTGGGCTAGGTGGAGAATTCAATGTGCAAAGCCACTTCCTTTTAGGCGCTAAAGGACGGCGTAGCTTGGG-GTGGG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 69468 155 + 287728 TGACATTTTACAGTATGTCAGTTTCTTCTTGAAAGATGTTTAGTGTTTTAACCCATTG-----ATGTTAAGATGATGGTGTGCTATGGGCTAGGTGGAGAATTCAATGTGCAAAGCCACATCCTTTTAGGAGCTAAAGGACAGCGTAGCTTGGGCACGCA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 914840 145 + 5252280 T-AAATTTTATAACACACCAACTTCATTC---GAGACACACCATGTTCCGACCC--TG-----ATGGGCACATGGGGGTA-GATACCGGAGAAGTTGAAAACTCAGTTTG-GAAACCACACCCCTCT-GGAGTCAGATGACTACTGGGGATGAA-ATGTG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1623425 153 + 4416731 TAAAATGCTACAGTATACTAATTCCTTCATTGCAGGTAAAT-GTATTTCAACTGATTG-----ACGTCAA-ATGATGATACAATAAGTGATAAGTCAGAAATCTAATTTAGAAAACCATATCCTTTTATAACCTAGATGATCAATTAGTTAagcaatggg i dasNov3.JH576208 I 44 C 0 e mm10.chr12 89962715 21660 - 120129022 I e colAng1.NW_012118821v1 1324189 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=3812393.000000 s hg38.chr2_KI270774v1_alt 65004 541 + 223625 CCTCTA-AGTGATGTGGAACTG-----AGCTCCATGACTC---ACGGGTGCTGC-------------------------agccttaatgtcctcatttgcaaaattagaataacaattgtctctacctcatgaaat-tgttgagaat-tagagaaattgtgcctggc--a--gcataagcacac-a-taaacgcagctgtaaattgtggttGCTTTCATGAGGATGGGAA-----------------GATGGAGGAGTTT-TTACCCCAATCCC-AAGGAGGCACTGGCAGAGAAGAGATCACCTGCAGTCT--------------------------------ATCTTTTGACC-----GAAAG------AAGCTC----CC-TGATG-CATTAAACC-CTTTAAAATGCATCTCCA---CGACTGCACAG-CCCACC-CTCAGAGGC-CACCGGCGATGCCCACGTAGAACCCGGGAGCGTTTCAGTCCCACTAGGGCACAGGAGTGGCA-CTACCTTTCAGAGCAACT-GTCAGCTGGCTTCTGCGGCAAACAGCTCCCAAGTATA-AATGACAACACAGATAT--TCCTGGCTGGGCAGCTCCACACAGTTGCTCTTTTCCAAGAGGTGATTCAAGAATG-TAAGCTTCCTCC--TTGAAGG- s panTro5.chr2A 1342282 541 + 111504155 CCTCTA-AGTGATGTGGAACTG-----AGCTCCATGACTC---ACGGGTGCTGC-------------------------agccttaatgtcctcatttgcaaaattagaataacaattgtctctacctcatgaaat-tgttgagaat-tagagaaattgcacctggc--a--gcataagcacac-a-taaacgcagctgtaaattgtggttGCTTTCATGAGGATGGGAA-----------------GATGGAGGAGTTT-TTACCCCAATCCC-AAGGAGGCACTGGCAGAGAAGAGATCACCTGCAGTCT--------------------------------ATCTTGTGACC-----GAAAG------AAGCTC----CC-TGATG-CATTAAACC-CTTTAAAATGCATCTCCA---CGACTGCACAG-CCCACG-CTCAGAGGC-CACCAGCGATGCCCACATAGAACCCGGGAGGGTTTCAGTCCCACTAGGGCACAGGAGTGGCA-CTGCCTTTCAGAGCAACT-GTCAGCTGGCTTCTGCGGCAAACAGCTCCCAAGTATA-AATGACAACACAGATAT--TCCTGGCTGGGCAGCTCCACACAGTTGCTCTTTTCCAAGAGGTGATTCAAGAATG-TAAGCTTCCTCC--TTGGAGG- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1302742 541 + 114371477 CCTCTA-AGTGATGTGGAACTG-----AGCTCCATGACTC---ACGGGTGCTGC-------------------------Agccttaatgtcctcatttgcaaaattagaataacaattgtctctacctcatgaaat-tgttgagaat-tagagaaattGCACCTGGC--A--GCATAAGCACAC-A-TAAACGCAGCTGTAAATTGTGGTTGCTTTCATGAGGATGGGAA-----------------GATGGAGGAGTTT-TTACCCCAATCCC-AAGGAGGCACTGGCAGAGAAGAGATCACCTGCAGTCT--------------------------------ATCTTTTGACC-----GAAAG------AAGCTC----CC-TGATG-CATTAAACC-CTTTAAAATGCATCTCCA---CGACTGCACAG-CCCACC-CTCAGAGGC-CACCAGCCATGCCCACATAGAACCCGGCAGGGTTTCAGTCCCACTAGGGCACAGGAGTGGCA-CTGCCTTTCAGAGCAACT-GTCAGCTGGCTTCTGCGGCAAACAGCTCCCAAGTATA-AATGACAACACAGATAT--TCCTGGCTGGGCAGCTCCACACAGTTGCTCTTTTCCAAGAGGTGATTCAAGAATG-TAAGCTTCCTCC--TTGGAGG- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1327625 540 + 1464242 CCTCTA-AGTGATGTGGAACTG-----AGCTCCATGACTC---ACGGGTGCTGC-------------------------agccttaatgtcctcatttgcaaaattagaataacaattgtctctacctcatgaaat-tgttgagaat-tagggaaattgtgcctgGC--A--GCATAAGCACAC-A-TAAATGCAGCTGTAAATTGTGGTTGCTTTCATGAGGATGGGAA-----------------GATGGA-GAGTTT-TTACCCCAATCCC-AAGGAGGCACTGGCAGAGAAGAGATCACCTGCAGTCT--------------------------------ATCTTTTGACC-----GAAAG------AAGTTC----CA-TGATG-CATTAAACC-CTTTAAAATGCGTCTCCA---CGACTGCACAG-CCCACC-CTCAGAGGC-CACCGGTGATGCCCACGTAGAACCTGGGAGCGTTTCAGTCCCACTAGGGCACAGGAGTGGCA-CTGCCTTTCAGAGCAACT-GTCAGCTGGCTTCTGCGGCAAACAGCTCCCAAGTATA-AATGACAACACAGATAT--TCCTGGCTGGGTAGCTCCACACAGTTGCTCTTTTCCAAGAGGTGATTCAAGAATG-TAAGCTTCCTCC--TTGGAGG- i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1387700 545 + 108979918 CCTCTA-AGTGATGTGGAACTG-----AGCTCCATGACTC---AGGTGTGCTGC-------------------------agccttaatgtcctcctttgcaaaatgaaaataacaagtgtctctacctcatgaaat-tgttgagaat-tagagaaattgtgcctggc--a--gcataagcacac-a-caaaagcagctgtaaattgtggttGCTTCCATGAGGATGGGAA-----------------GACGGAAGAGTTT-TTACCCCAATCGC-AAGGAGGCACTGGCAGGGAAGAGGTCACGTGCAGTCT--------------------------------ACCTTTTGACC-----ATAAG------AAGCTC----CC-CGTTG-CATTAAACC-CTTTAAAATGTGTCTCCACGACGACTGCACCA-CCCACCAAGCAGAGGC-CACCGGCGATGCCCACGTTGAACCCAGGAGCGTTTCAGTCCCACTAGGGCACAGGAGGGGCA-CTGCCTTTCAGAATAACT-GTCAGCTGGCTTCTGTGACAAACAGCTCCCAAGTATA-AATGACAACACAGATAT--TCCTGGCAGGGCAGCTTCACATAGTTGCTCTTTTCCAAGAGGTGATTCAGGAATG-TAAGCTTCCTCC--TTGGAGG- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1359987 545 - 111193037 CCTCTA-AGTGATGTGGAACTG-----AGCTCCATGACTC---AGGTGTGCTGC-------------------------agccttaatgtcctcctttgcaaaatgaaaataacaagtgtctctacctcatgaaat-tgttgagaat-tagagaaattgtgcctggc--a--gcataagcacaC-A-CAAAAGCAGCTGTAAATTGTGGTTGCTTCCATGAGGATGGGAA-----------------GACGGAAGAGTTT-TTACCCCAATCGC-AAGGAGGCACTGGCAGGGAAGAGGTCACGTGCAGTCT--------------------------------ACCTTTTGACC-----ATAAG------AAGCTC----CC-CGTTG-CATTAAACC-CTTTAAAATGTGTCTCCACGGCGACTGCACCA-CCCACCAAGCAGAGGC-CACCGGCGATGCCCACGTTGAACCCAGGAGCGTTTCAGTCCCACTAGGGCACAGGAGGGGCA-CTGCCTTTCAGAATAACT-GTCAGCTGGCTTCTGTGACAAACGGCTCCCAAGTATA-AATGACAACACAGATAT--TCCTGGCAGGGCAGCTTCACATAGTTGCTCTTTTCCAAGAGGTGATTCAGGAATG-TAAGCTTCCTCC--TTGGAGG- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1388492 537 + 3644372 CTTCTAGAGTGATGTGTAACTG-----AGCTCCATGACTC----GGTGTGCTGC-------------------------AGCCTTAATGTCCTCCCTTGCAAAATGAAAATAACAAGTGGTTCTA-CTCATGAATT-GGT--GGAAT-TAGAGAAA-TGTGCCT-GC--A--GCATAAGCACAC-A-CAAAA-CAGCTGTAAATTGTGGTTG-TTCCATGAGGATGGGAA-----------------GACGGAAGAGTTT-TTACCCCAATCGC-AAGGAGGCACTGGCAGGGAAGAGGTCACGTGCAGTCT--------------------------------ACCTTTTGACC-----ATAAG------AAGC-C----CC-CGTTGCCATTAAACC-CTTTAAAATGTGTCTCCACGACGACTGCACCACCCCACCAAGCAGAGGC-CACCGGCGATGCCCACGTTGAACCCAGGAGCGTTTCAGTCCCACTA-GGCACAGGAGGGGCA-CTGCC-TTCAGAATAACTGGTCAGCT-GCTTCTGTGACAAACGG-TCCCAAGTATACAATGACAACACAGATAT--TCCTGGCAGGGCAGCTCCACACAGTTGCTCTTTTCCAAGAGGTGATTCAGGAATG-TAAGCTTCCTCC--TTGGAGG- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1341823 545 - 10304083 CCTCTA-AGTGATGTGGAACTG-----AGCTCCATGACTC---AGGCGTGCTGC-------------------------agccttaatgtcctcctttgcaaaatgaaaataataagtgtctctacctcatgaaat-tgttgagaac-tagagaaattgtgcctggc--a--gcataagcacac-a-caaacgcagctgtaaattgtggttGCTTCCATGAGGATGGGAA-----------------GACGGAAGAGTTT-TTACCCCAATCGC-AAGGAGGCACTGGCAGGGAAGAGGTCACGTGCAGTCT--------------------------------ACCTTTTGACC-----ATAAG------AAGCTC----TC-TGTTG-CATTAAACC-CTTTAAAATGTGTCTCCACGACGACTGCACCA-CCCACCAAGCAGAGGC-CACCGGCGATGCCCACGTTGAACCCAGGAGCGTTTCAGTCCCACTAGGGCACAGGAGGGGCA-CTGCCTTTCAGAATAACT-GTCAGCTGGCTTCTGTGACAAACGGCTCCCAAGTATA-AATGACAACACAGATAT--TCCTGGCAGGGCAGCTTCACATAGTTgctcttttccaagaggtgattcaggaatg-taagcttcctcc--ttggagg- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1414703 545 - 107702431 CCTCTA-AGTGATGTGGAACTG-----AGCTCCATGACTC---AGGCATGCTGC-------------------------Agccttaatgtcctcctttgcaaaatgaaaataacaagtgtctctacctcatgaaat-tgttgagaac-tagagaaattGTGCCTGGC--A--GCATAAGCACAC-A-CAAACGCAGCTGTAAATTGTGGTTGCTTCCATGAGGATGGGAA-----------------GACGGAGGAGTTT-TTACCCCAATCGC-AAGGAGGCACTGGCAGGGAAGAGGTCACGTGCAGGCT--------------------------------ACCTTTTGACC-----ATAAG------AAGCTC----CC-CGTTG-CATTAAACC-CTTTAAAATGTGTCTCCACGACGACTGCACCA-CCCACCAAGCAGAGGC-CACCGGCGATGCCCATGTTGAACCTGGGAGCGTTTCAGTCCCACTAGGGCACAGGAGGGGCA-CTGCCTTTCAGAGTAACT-GTCAGCTGGCTTCTGTGACAAACGGCTCCCAAGTATA-AATGACAACACAGATAT--TCCTGGCAGGGCAGATTCACACAGTTGCTCTTTTCCAAGAGGTGATTCAGGAATG-TAAGCTTCCTCC--TTGGAGG- i chlSab2.chr14 I 188 C 0 s manLeu1.NW_012103754v1 890525 545 - 2200435 CCTCTA-AGTGATGTGGAACTG-----AGCTCCATGACTC---AGGCGTGCTGC-------------------------agccttaatgtcctcctttgcaaaatgaaaataacaagtgtctctacctcatgaaat-tgttgagaac-tagagaaattgtgcctggc--a--gcataagcacac-a-caaaagcagctgtaaattgtggttGCTTCCATGAGGATGGGAA-----------------GACGGAAGAGGTT-TTACCCCAATCGC-AAGGAAGCACTGGCAGGGAAGAGGTCACGTGCAGTCT--------------------------------ACCTTTTGACC-----ATAAG------AAGCTC----CC-CGTTG-CATTAAACC-CTTTAAAATGTGTCTCCACGACGACTGCACCA-CCCACCAAGCAGAGGC-CACCGGCGATGCCCACGTTGAACCCAGGAGCGTTTCAGTCCCACTAGGGCACAGGAGGGGCA-CTGCCTTTCAGAGTAACT-GTCAGCTGGCTTCTGTGACAAACGGCTCCCAAGTATA-AATGACAACACAGATAT--TCCTGGCAGGGCAGCTTCACATAGTTGCTCTTTTCCAAGAGGTGATTCAGGAATG-TAAGCTTCCTCC--TTGGAGG- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1338609 568 - 108792865 CCTCTG-AGTGAAGTGGAATCG-----AGCACCATGGCTC---GGTGGTGGCGC-------------------------agccttaatgtccttgttcacaaaatggaaataacagttgtctccacctc-----at-tgttgagagt---gaggagctgcgcctggc--a--ccgtaagcacac-a-taaacgcaactgcaaattgtggctGCTTTCATGAGGATGGGAA-----------------GACAGAGGCGTTT-TTGCCCTAATCCC--AGGGGGCGCCGGCAGAGAAGAGCTCACCTGCAGCCTACCCTTTGACCATAAGAAGCTCCCTGCAGCTGATCCTTTGACC-----ATAAG------AAGCT-----CC-CCTGG-CATCAAACC-CTTTAAAATGTGTCTCAATGATGACTGCACAG-CCCACCGAGCAGAGCC-CACCAGCAATGCACATGTAGGAGCCGGGAGCATTTCAGTCCCACCAGGGCACAGGAGTGGCACCTGCCTTTCACAG-AACT-GTCAGCTGGCTTCTGTGACAAACGGCGCCCAAATATA-CATGACAACGCAGATAT--TCCTGGGTGGGCAGCTCCACACAGTGGCCCTTTTCTAAGAGATGATTCAGGAATG-TAAGCTTCCTCC--TCGGAGG- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1188896 541 - 7082604 CCTCTG-AGTGAAGTGGAATTG-----AGTGCCATGACTCTGTGGTGGTGGCAC-------------------------Agcctcaatgtcctcgttcgcaaaatggaaataacaattgtctccacctcttgaaat-tgttgagagT---GAGGAGCTGTGCCTGGC--A--CCCTAAGCACAC-A-TAAATGCAACTGCAAATTGTGGCTGCTTTCATGAGGATGGGAA-----------------GAC--AGTCATTT-TTACCCTAATCCC-GAGGAGGCACC-GCAGAGAAGAGTTCACCTGCAGCCC--------------------------------ATCCTTTGACC-----ATAAG------AAACT-----TC-CCCGG-CATCACA-C-CTTTAAAATGCGTCTCCACGATGACTGCACAG-CCCACAGAGCAGAGCC-CACCAGTGACAAACACGTAGAAGCCGGGAGCGTTTCAGTCCCACCGGGGCACAGGAGTGGCACCTGCCTTTCAGAGTGACT-GTCAGCTGGCTTCTGTGACAAACGGC-CCCAAATGTA-CATGACAACACAGATAC--TCCTGGCTGGGCAGCTCCAAACAGTTGCTCTTTTCCAAGAGATGGTTCAGGAATG-TAAGCTTCGTCC--TCGGAGG- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1280385 541 + 1864846 CCTCTG-AGTGAAGTGGATTTG-----AGCACCATGAGTC---GGTGGTGGCAC-------------------------agccttaatgtcctcgttcgcaaaatggaaataacaattgtctccacttcatgaaat-tgttgagagT---GAGTAGCTGCGCCTGGC--A--CCGTAAGCATGC-A-TAAATGCAACTGCAAATTGTGGCTGCTTTCATGAGGATGGGAA-----------------GACAGAGGCATTT-TTACCCTGAACCT-GAGGAGGCACTGGCAGAGAAGAGTTCA-CTGCAGCCT--------------------------------ATCCTTGGACC-----ATAAG------AAGCT-----CC-CCTGG-CATCAAACC-CTTTAAAATGCGTCTCCACGATGACTGCACAG-CCCACCGAGCAGAGCC-CACCAGCGACGCACACGTAGAAGCTGGGAGCG-TTCAGTCCCACCAGGGCACAGGAGTGGCACCTGCCTTTCAGAGTAACT-GTCAGCTGGCTTCTGTGACAAACGGCCCCCAAATATA-CATGACAACACAGATAT--TCCTGGCTGGGCAGCTCCACACAGTTGCTCTTTTACAAGAGATGATTCAGGAATG-TAAGCTTCCTCC--TCGGAGG- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 69623 516 + 287728 CCTCTG-AGTGAAGTGGAACTG-----AGCGCCATGACTC---GGTGGTGACGC-------------------------agccttaatgtcctcgttcgcaaaatggaaataacaattgtctccacctcatggaat-tgttgagagT---GAGGAGCTGTGCCTGGC--A--CCGTAAGCACAC-A-GAAACACAGCTGCAAATTGTGGCTGCTTTCATGCGGATGGGAA-----------------GAGAGAGGCGTTT-TTACCCTAATCCC-GAGGAGGCACCGGCAGAGAAGAGTTAACCTGCAGCCT--------------------------------ATCCTTTGACC-----ATAAG------AAGCTC----CC-CCTGG-CATCAAACC-CTTTAAAATGCGTCTCCACGATGACTGCACAG-CCCCCCGAGCAGAACC-CACCAGTGATGCACACGTAGAAGCCGGGAGCATTTCAGTCCCACCAGGGCACAGGAGTGGCACCTGCCTTTCAGAGTAACT-GTCAGCTGGCTTCTGTGACAAACGGCCCCCAAATATA-CATGACAAC------------------------------ACAGTTGCTCTTTTCCAAGAGATGATTCAGGAATG-TAAGCTTCCTCC--TCGGAGG- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 914985 534 + 5252280 CCTGGA-AGTCAGGAGGAACTG-----AGTTCCACGGCTT--GGGGGGTTGTGC-------------------------agccccaagttccccatttgtaaaatgagaatatggatagtttctg--tcatgcagcgtgttgagaggattaGGAAGCTGTGGCTGGCCTG--GCATAGGCATTCAA-TAAACACACCGTT--ACTCAGGTCACATCCATGAAGGTAGGAAGCCTCCCTGTCATCCATGACAGAGGACTTC-CCACCCTGATACC-CAGGCAGTGTGAGCAGGGAC-AGCTCATCTCCAGCTT--------------------------------GTTCTCTGAACTTTAGACCAG------AAACTC----CCACGTCT-TATTAAACCTCTTGAAAAGGTGTCCCAAGAGCAAGTGCTCAG-CCAGCTGAGCACAGAC-TCGCAATGCAGTGTGCCCAGAGCTCAGGGTCACCAC-GTACCACAAAG--CTAGGAGCAGGG-CCACCCTGCAGAGCAGCT-A---------------GACAAACAGCCCCCACATGTA--ATGACAGCACAGAAATGGTCCT-GTGGGGCAGC-------------------CCTGAAGGTGACTCAGGGACACCAAGCCCCCCAT--CTCTGGG- i otoGar3.GL873658 C 0 I 1 s dasNov3.JH576208 1623578 561 + 4416731 ccttga-aagaatggagttccattcccagtcccatgactt-ttagttgtacagccttggaaaattatctaacctttttgggccttggtttcctcatatgaaaagtgggactaagaattgtttctacctctcatgat-tgttgacaat-ttgagaaattgtgcttggc--acggtatatgcatgc-agtaaatgtagctataaatTTGGGTTGCATTAACAGAGATGGGAAACCTCTTAGTCATTCAAAACAGAAGGATTTCCTATCCCAATTTCAAAAAAGGTGTTAAGGAAGAAGAATTAACCTCCAGCCT--------------------------------ATCATTTGCCC-----AGAAGACCTGTAAATTCCTCACC-TGTCA-TATTAAACTTCTTGAAAAGATTATTCAACATCTAATGCACAA-TTTACTACTGAGAGCCTCACTGAAGTTGCAAATATCGAAGCCAGTATCATTCCAG-------------------------CTT-------------CT-G---------------GGTAAATAGCTCCCAAATTTA-AATGACTGAACAGGTGT--TGGTGATTGGACAGCTCC-TACAGTTTCTCTCTTCCAAATGGTGATTCACAAATG-TAGACTTCTTCCAGTTTAAGAT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e colAng1.NW_012118821v1 1324189 0 - 13651311 C e nomLeu3.chr19 1052267 2520 + 81552678 M a score=482851.000000 s hg38.chr2_KI270774v1_alt 65545 47 + 223625 GTCAGCATCTTCAACACAGAAACCCCAAGGCCACTATGGAAGCAGAG s panTro5.chr2A 1342823 47 + 111504155 GTCAGCATCTTCAACACAGAAACCCCAAGGCCACTATGGAAGCAGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1303283 47 + 114371477 GTCAGCATCTTCAACACAGAAACCCCAAGGCCACTATGGAAGCAGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1328165 47 + 1464242 GTCAGCATCTTCAACACAGAAACCCCAAGGCCACTATGGAAGCAGAG i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1388245 47 + 108979918 GTCAGCATCTTCAACACAGAAACCCCAAGGCCACTATGGAAGCAGAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1360532 47 - 111193037 GTCAGCATCTTCAACACAGAAACCCCAAGGCCACTATGGAAGCAGAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1389029 47 + 3644372 GTCAGCATCTTCAACACAGAAACCCCAAGGCCACTAGGAAAGCAGAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1342368 47 - 10304083 gtcagcatcttcaacacagaaactccaaggccactatggAAGCAGAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1415248 47 - 107702431 GTCAGCATCTTCAACACAGAAACCCCAAGGCCACTATGGAAGCAGAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 891070 47 - 2200435 GTCAGCATCTTCAACACAGAAACCCCAAGGCCACTATGGAAGCAGAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1324189 47 - 13651311 GTCAGCATCTTCAACACAGAAACCCCAAGGCCACTATGGAAGCAGAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1339177 47 - 108792865 GCCAGCATCTTCAACCCAGAAGCCCCGAGGCCACTATGGAAGTAGAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1189437 45 - 7082604 GTGGGCATCTTCAACCCAGAAGCCCCAAGGCCGC--TGGAAGTAGAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1280926 47 + 1864846 GTCGGCATCTTCAACCCAGAAGCTCCAAGGCCACTGTGGAAGCAGAG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 70139 47 + 287728 ATCAGCATCTTCAACCCAGAAGCCCCAAGGTCACTATGGAAGTAGAG i aotNan1.NW_018513311v1 C 0 I 25 s otoGar3.GL873658 915520 43 + 5252280 GTCAGCATCT---GCGCAGAAAC-CCAGGGTCATCATAGGAGCAGAA i otoGar3.GL873658 I 1 C 0 s dasNov3.JH576208 1624139 47 + 4416731 TTCAGTATCATTAACACAAAACTCCCCGGGCCATTGTGGAAGAAGAG i dasNov3.JH576208 C 0 I 3 e mm10.chr12 89962715 21660 - 120129022 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=11742.000000 s hg38.chr2_KI270774v1_alt 65592 2 + 223625 AG s panTro5.chr2A 1342870 2 + 111504155 AG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1303330 2 + 114371477 AG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1328212 2 + 1464242 AG i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1388292 2 + 108979918 AG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1360579 2 - 111193037 AG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1389076 2 + 3644372 AG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1342415 2 - 10304083 AG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1415295 2 - 107702431 AG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 891117 2 - 2200435 AG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1324236 2 - 13651311 AG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1339224 2 - 108792865 CG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1189482 2 - 7082604 CG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1280973 2 + 1864846 CT i cebCap1.NW_016107827v1 C 0 I 43 s otoGar3.GL873658 915563 2 + 5252280 AG i otoGar3.GL873658 C 0 I 1 s dasNov3.JH576208 1624189 2 + 4416731 AG i dasNov3.JH576208 I 3 C 0 e aotNan1.NW_018513311v1 70186 25 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=39031.000000 s hg38.chr2_KI270774v1_alt 65594 11 + 223625 --AAGGGGGCGCA s panTro5.chr2A 1342872 11 + 111504155 --AAGGGGGCGCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1303332 11 + 114371477 --AAGGGGGCGCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1328214 11 + 1464242 --AAGGGGGCGCA i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1388294 11 + 108979918 --AAGGGGGCACA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1360581 11 - 111193037 --AAGGGGGCACA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1389078 11 + 3644372 --AAGGGGGCACA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1342417 11 - 10304083 --AAGGGGGTGCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1415297 11 - 107702431 --AAGGGGGTGCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 891119 11 - 2200435 --AAGGAGGCACA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1324238 11 - 13651311 --AAGGGGGCACA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1339226 9 - 108792865 ----GCAAGCACG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1189484 9 - 7082604 ----GCCAGCACG i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 915566 10 + 5252280 --AGAGGGGTGA- i otoGar3.GL873658 I 1 C 0 s dasNov3.JH576208 1624191 11 + 4416731 GAGAAGAGGCA-- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 70186 25 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e cebCap1.NW_016107827v1 1280975 43 + 1864846 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=275316.000000 s hg38.chr2_KI270774v1_alt 65605 38 + 223625 CACCCCTCTTG---CCCATGCCTTACTGGCCAGCAACACTC s panTro5.chr2A 1342883 38 + 111504155 CACCCCTCTTG---CCCATGCCTTACTGGCCAGCAACACTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1303343 38 + 114371477 CACCCCTCTTG---CCCATGCCTTACTGGCCAGCAACACTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1328225 38 + 1464242 CACCCCTCTTG---CCCATGCCTTACTGGCCAGCAACACTC i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1388305 38 + 108979918 CACCCCTCCTG---CCCATGCTTTACTGGCCAGCAACAGTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1360592 38 - 111193037 CACCCCTCCTG---CCCATGCTTTACTGGCCAGCAACAGTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1389089 37 + 3644372 CACCCCTCCTG----CCATGCTTTACTGGCCAGCAACAGTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1342428 38 - 10304083 CACCCCTCCTG---CCCATGCTTTACTGGCCAGCAACAGTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1415308 38 - 107702431 CACCCCTCCTG---CCCACGCTTTACTGGCCAGCAATAGTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 891130 38 - 2200435 CACCCCTCCTG---CCCATGCTTTACTGGCCAGCAACAGTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1324249 38 - 13651311 CACCCCTCCTG---TCCACGCTTTACTGGCCAGCAACAGTC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1339235 38 - 108792865 ---CCCCCCCGCCCCCCACGACTTGCTGGCCAGCAGCACTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1189493 35 - 7082604 ---CCCCCCTG---CCCACGACTTGCCGGCCAGCAGCACTC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1281018 38 + 1864846 ccccccccccG---CCCACGACTTGCTGGCCAGCAGCACTC i cebCap1.NW_016107827v1 I 43 C 0 s otoGar3.GL873658 915576 38 + 5252280 CATTCCTTTGG---CCCGCGTCCTATAGGCTAGAATCATGC i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1624202 38 + 4416731 AATATCCCCCA---CTTCTTTCCTATTGGCCAGAAACCCTG i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 70186 25 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=2225484.000000 s hg38.chr2_KI270774v1_alt 65643 267 + 223625 ACTT-GCCTCCATGAAAACATGAGACATCATGTCTTCATGATGAGAAATATCATCTTGTCA--ACTGC--CCAATGGAAAACTAAAGTATTTTAGTG--AACAAAGCATTGCC-TTTGCCACAGTTACCAAAACTGGTGAAGCTGAAC----AGCTGCAAAGGATACAGGCAGCAAA-CTGCCCTGAAACTGATGGAAAGAA----CCTTGCTAGGATTGTCACAACCAGGAATTCCAGGAAGACCTGGACTACATAGATATGTAAAGAAAAAGATGCTCTTTC s panTro5.chr2A 1342921 265 + 111504155 ACTT-GCCTCCATGAAAACATGAGACGTCATGTCTTCATGATGAGAAATATCATCTTGTCA--ACTGC--CCAATGGAAAACTAAAATATTTTAGTG--AACAAAGCATTGCC-TTTGC--CAGTTACCAAAACTGGTGAAGCTGAAC----AGCTGCAAAGGATACAGGCAGCAAA-CTGCCCTGAAACTGATGGAAAGAA----CCTTGCTAGGATTGTCACAACCAGGAATTCCAGGAAGACCTGGACTACATAGATATGTAAAGAAAAAGATGCTCTTTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1303381 265 + 114371477 ACTT-GCCTCCATGAAAACATGAGACGTCATGTCTTCATGATGAGAAATATCATCTTGTCA--ACTGC--CCAATGGAAAACTAAAATATTTTAGTG--AACAAAGCATTGCC-TTTGC--CAGTTACCAAAACTGGTGAAGCTGAAC----AGCTGCAAAGCATACAGGCAGCAAA-CTGCCCTGAAACTGATGGAAAGAA----CCTTGCTAGGATTGTCACAACCAGGAATTCCAGGAAGACCTGGACTACATAGATATGTAAAGAAAAAGATGCTCTTTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1328263 267 + 1464242 ACTT-GCCTCCATGAAATCATGAGACGTCATGTCTTCATGATGAGAAATATCATCTTGTCA--AGTGC--CCAATGGAAAACTAAAATATTTTAGTG--AACAAAGCATTGCC-TTTGCCACAGTTACCAAAACTGGTGAAGCTGAAC----AGCTGCAAAGGATACAGGCAGCAAA-CTGCCCTGAAACTGATGGAAAGAA----CCTTGCTAGGATTGTCACAACCAGGAATTCCAGGAAGACCTGGACTACATAGATATGTAAAGAAAAAGATGCTCTTTC i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1388343 266 + 108979918 ACTT-GCCTCCATGAAAACCTGAGGCATCATGTCTTCATGACGAGAAATATCATCTTGTCA--AGTGC--CCAACGGAAAACTAAAATATCTTAGTG--AACAAAGCATTGTC-TTTACCACAGGTACCAAAATTGGTGAAGCTGAAC----AGCTGCAAAGGATACAGGCAGCAAA-GTGCCCCGAAACTCATGGAAAGAA----CCTTGCTAGGATTGCCACAACCAG-GATTCCAGGAAGACCTGGACTACATAGATACGTAAAGAAGAAGATGCTCTTTC i rheMac8.chr13 C 0 I 1897 s macFas5.chr13 1360630 266 - 111193037 ACTT-GCCTCCATGAAAACCTGAGGCATCATGTCTTCATGACGAGAAATATCATCTTGTCA--AGTGC--CCAACGGAAAACTAAAATAACTTAGTG--AACAAAGCATTGTC-TTTACCACAGGTACCAAAATTGGTGAAGCTGAAC----AGCTGCAAAGGATACAGGCAGCAAA-GTGCCCCGAAACTCATGGAGAGAA----CCTTGCTAGGATTGCCACAACCAG-GATTCCAGGAAGACCTGGACTACATAGATACGTAAAGAAGAAGATGCTCTTTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1389126 270 + 3644372 ACTT-GCCTCCATGAAAACCTGAGGCATCATGTCTTCATGACGA-AAATATCATTTTGTCAACAGTGC--CCAACGGAAAACTAAAATATCTTAGTG--AACAAAGCATTGTCTTTTACCACAGGTACCAAAATTGGTGAAGCTGAAC----AGCTGCAAAGGATACAGGCAGCAAAGGTGCCCCGAAACTCATGGAAAGAA----CCTTGCTAGGATTGCCACAACCAGCGATTCCAGGAAGACCTGGACTACATAGATACGTAAAGAAGAAGATGCTCTTTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1342466 267 - 10304083 ACTT-GCCTCCATGAAAACCTGAGGCATCATGTCTTCATGACGAGAAATATCATCTTGTCA--AGTGC--CCAACGGAAAACTTAAATATTTTAGTG--AACAAAGCATTGTC-TTTGCCACAGGTACCAAAATTGGTGAAGCTGAAC----AGCTGCAAAGGATACAGGCAGCAAA-GTGCCCCGAAACTCATGGAAAGAA----CCTTGCTAGGATTGCCACAACCAGGAATTCCAGGAAGACCTGGACTACATAGATACGTAAAGAAGAAGATGCTCTTTC i cerAty1.NW_012000820v1 C 0 I 1908 s chlSab2.chr14 1415346 266 - 107702431 ACTT-GCCTCCATGAAAACCTGAGGCATCATGTCTTCATGACGAGAAATATCATCTT-CCA--AGTGC--CCAACGGAAAACTAAAATATTTTAGTG--AACAAAGCATTGCC-TTTGCCACAGGTACCAAAATTGGTGAAGCTGAAC----AGCTGCAAAGGATACAGGCAGCAAA-GTGCCCCGAAAGTCATGGAAAGAA----CCTTGCTAGGATTGCCACAACCAGGAATTCCAGGAAGACCTGGACTACATAGATACATAAAGAAGAAGATGCTCTTTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 891168 268 - 2200435 ACTTGGCCTCCATGAAAACCTGAGGCATCATGTCTTCATGATGAGAAATATCATCTTGTCA--AGTGC--CCAACGGAAAACTAAAATATTTTAGTG--AACAAAGCATTGTC-TTTGCCACAGGTACCAAAATTGGTGAAGCTGAAC----AGCTGCAAAGGATACAGGCAGCAGA-GTGCCCCGAAACTCATGGAAAGAA----GCTTGCTAGGATTGCCACAACCAGGAATTCCAGGAAGACCTGGACTACATAGATACATAAAGAAGAAGATGCTCTTTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1324287 252 - 13651311 ACTT-GCCTCCGTCAAGATCTGAGGCGTCATGTCTTCATGACGAGAAATATCATCTTGTCA--AGTGC--CCAATGGAAAACTAAAATATTTTAGTG--AACAAAGCATTGCC-TTTGCCACAGGTACCAAAATTGGTGAAGCTGAAC----AGCTGCAAAGGATACAGGCAGCAAA-GTGCCCCGAAACTCATGGAAAGAA----CCTTGCTAGG---------------AATTCCAGGAAGAGCTGGACTACATAGATACATAAAGAAGAAGATGCTCTTTC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1339273 271 - 108792865 ACTC-GCCTCCGTGGAC-CATGAGACATCACGTCTTCATGATGAGAAGGATCATCTCGCCT--GGTGC--CCAGTGGAAAACTAAAATATTTTAGTG--AACAAAGCATTGCC-TTTGCCACAGGTGCCCACATTAATGAAGTTGAACAATTAGTTGCAAAGGATACGGGCAGCAGAAGTGTCCGGAAATGCATGAAAAGGA----ACTTGCTAGGATTGTCACCACCAGGGATTCCAGGAAGACCTGGGCTTCTTAAGTATGTGAAGAAAAAGAAGCTCTTTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1189528 269 - 7082604 ACTT-GCCTCCGTGGAA-CATGAAACATCATGTCTTCGTGATGAGAAGTATCATCTTGCCC--GGTGT--TCAGTGGAAAACTAAAATATTTTAGTG--AGCAAAGCATTGCC-TTTGCCACAGGTACCCACGTTCATGAAGTTGAACAATTAGTCGCAAAGGATCCGGGCAGCAG--GTGTCCTGAAATGCGTGAAAAGGA----CCTTGCTAGGATTGTCATGACCAGGAATTTCAGGAAGACCTGGACTACTTAGATATGTAAAGAAAAAGCAGCTCTTTC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1281056 271 + 1864846 ACTC-GCCTCCGTGGAA-CATGAGACATCGTGTCTTCGTGATGAGAAGTATCATCTCGACC--GGTGC--TCAGTGGAAAACTGAAATATTTTAGTG--AACAAAGCATTGCC-TTTGCCACAGGTACCCACATTCATGAAGTTGAACAATTAGTTGCAAAGGATACGGGCAGCAGAAGTGTCCTGAAATGCATGAAAAGGA----CCTTGCTAGGATTGCCATGACCAGGAATTCCAGGAAGACCTGGACTACTTAGATATGTGAAGAAAAAGAAGCTCTTTC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 70211 270 + 287728 ACTG-GCCTCCGTGGAA-CATGAGACATCATGTCTTCGTGACGAGAAGTATCATCTCGCCC--GGTGC--CCAACGGAAAACTAGAATATTTGAGTG--AACAAAGCACTGCC-TTTGCCGCAGGTACCCATGTTAATGAAGTTGAACAATCAGTTGCAAAGGATACGGGCGGCAGAAGTGTCCTGAAAGGCACGAAAAGGC----CCTTGCTAGGA-TGTCATGACCAGGAATTCCAGGAAGACCTGGACTACTTAGATACGTAAAGAAAAAGAAGCTCTTTC i aotNan1.NW_018513311v1 I 25 C 0 s otoGar3.GL873658 915614 208 + 5252280 ACTT-GCCTCCATCTAAACATAAGAGA---------------GGGAAATACCATTTCTCCA--TGTTCTGCCATCAAGAAAAAAAAATATTTTGGTGGCAGCAAAAC-------T--------------------------GTTGATC----ACTTGTGAGTGATAGAGGAAACCAA-ATGCCCTGAA------------------CCTTACCAGAGTTGGTATGACCAGTAATCCCAGGAAAGCCCAAA--ATATAGACCTACAAAGAAGAGGCTGGCTCTTC i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1624240 254 + 4416731 ACAT-GCTTCCTTATA--CACGAGGCC-------------AAGGGTAATATCATCTT-TCA--TGTAC--CTGTAAGAAAAATAAAATATTTTGGTG--ACAATAGTACTGTC-TCTGACACAGTTTCCAAAATTGTTGATGTTGATC----AGTTGCAAGGGATGTAGGCAGCAAAAATCCTCTGAAACTTAAAAAAAAAAAGTCCCTTACTAGGAACTGCATGTATATTCATGCTAGGGAAGACTG--TCATATAGATCTATAAAGAAAAGGAAATTTATTC i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=15694.000000 s hg38.chr2_KI270774v1_alt 65910 2 + 223625 TT s panTro5.chr2A 1343186 2 + 111504155 TT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1303646 2 + 114371477 TT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1328530 2 + 1464242 TT i gorGor5.CYUI01015607v1 C 0 C 0 s macFas5.chr13 1360896 2 - 111193037 CT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1389396 2 + 3644372 TT i macNem1.NW_012011978v1 C 0 I 1900 s chlSab2.chr14 1415612 2 - 107702431 TT i chlSab2.chr14 C 0 I 2320 s manLeu1.NW_012103754v1 891436 2 - 2200435 TT i manLeu1.NW_012103754v1 C 0 I 1905 s colAng1.NW_012118821v1 1324539 2 - 13651311 TT i colAng1.NW_012118821v1 C 0 I 1900 s calJac3.chr14 1339544 2 - 108792865 TT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1189797 2 - 7082604 TT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1281327 2 + 1864846 TT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 70481 2 + 287728 TT i aotNan1.NW_018513311v1 C 0 I 1853 s otoGar3.GL873658 915822 2 + 5252280 TC i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1624494 2 + 4416731 TT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e cerAty1.NW_012000820v1 1342733 1908 - 10304083 I e rheMac8.chr13 1388609 1897 + 108979918 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=1577.000000 s hg38.chr2_KI270774v1_alt 65912 1 + 223625 T s panTro5.chr2A 1343188 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1303648 1 + 114371477 T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1328532 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s calJac3.chr14 1339546 1 - 108792865 T i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1189799 1 - 7082604 T i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1281329 1 + 1864846 T i cebCap1.NW_016107827v1 C 0 I 2181 s otoGar3.GL873658 915824 1 + 5252280 C i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1624496 1 + 4416731 C i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 70483 1853 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e colAng1.NW_012118821v1 1324541 1900 - 13651311 I e manLeu1.NW_012103754v1 891438 1905 - 2200435 I e chlSab2.chr14 1415614 2320 - 107702431 I e cerAty1.NW_012000820v1 1342733 1908 - 10304083 I e macNem1.NW_012011978v1 1389398 1900 + 3644372 I e macFas5.chr13 1360898 0 - 111193037 C e rheMac8.chr13 1388609 1897 + 108979918 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=1365.000000 s hg38.chr2_KI270774v1_alt 65913 1 + 223625 T s panTro5.chr2A 1343189 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1303649 1 + 114371477 T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1328533 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s otoGar3.GL873658 915825 1 + 5252280 T i otoGar3.GL873658 C 0 I 1177 s dasNov3.JH576208 1624497 1 + 4416731 T i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 70483 1853 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1189800 0 - 7082604 C e cebCap1.NW_016107827v1 1281330 2181 + 1864846 I e calJac3.chr14 1339547 0 - 108792865 C e colAng1.NW_012118821v1 1324541 1900 - 13651311 I e manLeu1.NW_012103754v1 891438 1905 - 2200435 I e chlSab2.chr14 1415614 2320 - 107702431 I e cerAty1.NW_012000820v1 1342733 1908 - 10304083 I e macNem1.NW_012011978v1 1389398 1900 + 3644372 I e macFas5.chr13 1360898 0 - 111193037 C e rheMac8.chr13 1388609 1897 + 108979918 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=3447.000000 s hg38.chr2_KI270774v1_alt 65914 9 + 223625 TT-TTA--ATAT s panTro5.chr2A 1343190 12 + 111504155 TTCTTAATATAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1303650 12 + 114371477 TTCTTAATATAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1328534 12 + 1464242 TTTTTAATATAT i gorGor5.CYUI01015607v1 C 0 C 0 s macFas5.chr13 1360898 11 - 111193037 CCCTTAA-GCAT i macFas5.chr13 C 0 I 1881 s calJac3.chr14 1339547 10 - 108792865 -CCTTAA-GCAT i calJac3.chr14 C 0 I 1791 s saiBol1.JH378218 1189800 10 - 7082604 -CCTTGA-GCAT i saiBol1.JH378218 C 0 I 2274 s dasNov3.JH576208 1624498 9 + 4416731 --CATAA-ACAT i dasNov3.JH576208 C 0 I 30926 e aotNan1.NW_018513311v1 70483 1853 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e cebCap1.NW_016107827v1 1281330 2181 + 1864846 I e otoGar3.GL873658 915826 1177 + 5252280 I e colAng1.NW_012118821v1 1324541 1900 - 13651311 I e manLeu1.NW_012103754v1 891438 1905 - 2200435 I e chlSab2.chr14 1415614 2320 - 107702431 I e cerAty1.NW_012000820v1 1342733 1908 - 10304083 I e macNem1.NW_012011978v1 1389398 1900 + 3644372 I e rheMac8.chr13 1388609 1897 + 108979918 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=493406.000000 s hg38.chr2_KI270774v1_alt 65923 908 + 223625 ATATA-ttttttattatactttaagctctagggtacatgtgcacaacgtgcaggtttgttacatatgtatacatgtaccatgttggtgtgctgcatccattactcgtcatttacattaggtatatctcctaatgctatccctcccccctccccccaccccacaacaggccccagtgtgtgatgttccccttcctgtgtccatgtgttctcattgttcaa-tcccacctatgagtgagaacatacagtgtttggttttctgtccttgtgatagtttgctgagaatgatggtttccagcttcatccatgtccctacaaaggacatgaactcatcattttttatggccgcatagtattccatggtgtatatgtgtcatatttccttaatccagtctatcattgttggacattagggttggttccaagtctttgctattgtgagtagtgccgcaataaacacaagtgtgcgtgtgtctttatagcagcatgatttatattcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttccagttctagatttctgaggaattgccacactgtcttccacaatggctgaactagtttacagtcccattaacagtgtaaaagtgttgctatctctctacatcctctccagcacctgttgtttcctgagcatttaatgatcgccattttaactggtgagagatgatatctcattgtggttttgatttgcatttctctgatggccagtgatgatgagcagtttttcatgtgtctgttggctgcataaatgtcttcttttgagaagtgtctgttcatatgctttgcccacttgttgatggggttgtttttttcttgcaaatttgtttgagttctttgtagattctgggtatcagccctttgtcagatga s panTro5.chr2A 1343202 909 + 111504155 ATATA-TAttttattatactttaagctctagggtacatgtgcacaacgtgcaggtttgttacatatgtatacaggtgccatgttggtgtgctgcatccattactcgtcatttacattaggtacatctcctaatgctatccctcccccctccccccaccccacaacaggccccagtgtgtgatgttccccttcctgtgtccttgtgttctcattgttcaattcccacctatgagtgagaacatgtggtgtttggttttctgtccttgtgatagtttgctgagaatgatggtttccagcttcatccatgtccctacaaaggacatgaactcatcattttttatggccgcatagtattccatggtgtatatgtgtcacatttccttaatccagtctatcattgttggacattagggttggttccaagtctttgctattgtgagtagtgccgcaataaacacacgtgtgcgtgtgtctttatagcagcatgatttataatcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttccagttctggatttctgaggaattgccacactgtcttccacaatggttgaactagtttacagtcccaccaacagtgtaaaactgttcctatttctccacatcctctccagcacctgttgtttcctgagcatttaacgatcgccattctaactggtgtgagatgatatctcattgtggttttgatttgcatttctctgatggccagtgatgatgagcagtttttcatgtgtctgttggctgcataaatgtcttcttttgagaagtgtctgttcatatccttcgcccacttgttgatggggttgtttttttcttgtaaatttgtttgagttctttgtagattctggatatcagccctttgtcagatga i panTro5.chr2A C 0 I 299 s panPan2.chr2A 1303662 909 + 114371477 ATATA-TAttttattatactttaagctctagggtacatgtgcacaacgtgcaggtttgttacatatgtatacaggtgccatgttggtgtgctgcatccattactcgtcatttacattaggtacatctcctaatgctatccctcccccctccccccaccccacaacaggccccagtgtgtgatgttccccttcctgtgtccttgtgttctcactgttcaattcccacctatgagtgagaacatgtggtgtttggttttctgtccttgtgatagtttgctgagaatgatggtttccagcttcatccatgtccctacaaaggacatgaactcatcattttttatggccgcatagtattccatggtgtatatgtgtcacatttccttaatctagtctatcattgttggacattagggttggttccaagtctttgctattgtgagtagtgccgcaataaacacacgtgtgcgtgtgtctttatagcagcatgatttataatcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttccagttctggatttctgaggaattgccacactgtcttccacaatggttgaactagtttacagtcccaccaacagtgtaaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgagcatttaacgatcgccattctaactggtgtgagatgatatctcattgtggttttgatttgcatttctctgatggccagtgatgatgagcagtttttcatgtgtctgttggctgcataaatgtcttcttttgagaagtgtctgttcatatccttcgcccacttgttgatggggttgtttttttcttgtaaatttgtttgagttctttgtagattctggatatcagccctttgtcagatga i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1328546 910 + 1464242 ATATAtttttttattatactttaagctctcgggtacatgtgcacaatgtgcaggttagttacatatgtatacatgtgccatgttggtgtgctgcatccattactcgtgatttacattaggtatatctcctaatgctatccctccccactcctcccaccccacaacaggccccggtgtgtgatgttccccttcctgtgtccacgtgttctcattgttcaattcccacctatgagtgagaacatgcggtgtttggttttctgtccttgtgatagtttgctgagaatgatggtttccagcttcatccatgtccctacaaaggacatgaactcattattttttatggccgcatagtattccatggtgtatatgtgtcacatttccttaatctagtctatcattgttggacattagggttggttccaagtctttgctattgtgagtagtgccgcaataaacacacgtgtgcgtgtgtctttatagcagcatgatttatattcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttccagttctagatttctgaggaattgccacactgacttccacaatggttgaactagtttacagtcccatcaacagtgtaaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgagcatttaatgatcgccattctaactggtgtgagatgatatatcattgtggttttgatttgcatttctctgatggccagtgatgatgagcagtttttcatgtgtctgttggctgcataaatgtcttcttttgagaagtgtctgttcatatccttcgcccacttgttgatggggttgtttttttcttgtaaatttgtttgagttctttgtagattctggatatcagccctttgtcagatga i gorGor5.CYUI01015607v1 C 0 C 0 e aotNan1.NW_018513311v1 70483 1853 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1189810 2274 - 7082604 I e cebCap1.NW_016107827v1 1281330 2181 + 1864846 I e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I e calJac3.chr14 1339557 1791 - 108792865 I e colAng1.NW_012118821v1 1324541 1900 - 13651311 I e manLeu1.NW_012103754v1 891438 1905 - 2200435 I e chlSab2.chr14 1415614 2320 - 107702431 I e cerAty1.NW_012000820v1 1342733 1908 - 10304083 I e macNem1.NW_012011978v1 1389398 1900 + 3644372 I e macFas5.chr13 1360909 1881 - 111193037 I e rheMac8.chr13 1388609 1897 + 108979918 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=1709446.000000 s hg38.chr2_KI270774v1_alt 66831 3208 + 223625 gtagattgcaaaaattttctcccattctgtaggttgcctgttcactctgatggtagtttcttttgctgtgcagaagctctttagtttaattagatcccatttgtcaattttggcttttgttgccattgtttttggtgttttagccatgacgtccttgcccatgcctatgtcctgaatggtattgcctaggttttcttctaggttttcttctaggtctaacatttaagtctttaatccatcttgaattaacttttgtataatgtgtaaggaaaggatccag-tttcagctttctacatatggctagccagttttcccagcaccgtttgttaaatagggaatactttccccatttcttgtttttgtcaggtttgtcaaagatcagatagttgtagatgtgtggcattatttctgagggctctgttctgttccattggtctatatctctgtttggtaccagtaccatgctgttttggttactgtagccttgtagtatagtttgaagtcaggtagcgtgatgcctccagctatgttctttggcttaggattgacctggcaatgcaggctcttttttggttccatatgaactgtagttttttccaattctgtgaagaaagtcattggtagcttcatggggatggcactgaatctataaattaccttgggcagtatggtcattttcaccatattgattcttcctacccatgagcatggaatgttcttccatttgtttgtatcctcttttatttcattgagcagtggtttgtagttctccttgaagaggtccttcacatcccttgtaagttggattcctaggtattttattctctttgaagcaattgtgaatgggagttcactcatgatttggctctttgtttgtgtgtttttggtgtataagaatgcttgtgatttttgcacattgattttgtatcctgagactttgctgaagttgcttatcagcttaaggagattttgggctgagatgatggggttttctaaatatacaatcatgtcatctgcaaacagggacaatttgacttcctcttttcctaattgaataccctttatttctttctcctgcctgatttccctggccagaacttccaacactatgttgaataggagtggtgagagagggcatccctgtcttgtgccagttttcaaagggaatgcttccagtttttgcccattcagtatgatattggctgtgggtttgtcataaatagctgttattatttttagatacatcccatcaatacctaatttattgagagtttttagcatgaaaggctgttgaattttgtcaaaggccttttctgcatctattgagataatcatgtggtttttgtctttggttctgtttatatgctggattacgtttattgatttgcgtatgttgaaccagccttgcatcccagggatgaagcccatttgatcatgg---ataagctttttgatgtgctgctggattcagtttgccagtattttattgaggatttttgcatcagtgttcatcagggatattggtctaaaattctctttttttgttgtgtctctgccaggctttggtatcaggatgatgctggcctcataaaatgagttagggaggattccctctttttgtattgattggaatagtttcagaaggaatggtaccagctcctccttgtacctctggtagaatttggctgtgaatctgtccagtcctggactttttttggttggtaagctattaattattgcctcaatttcagagcctgttattggtctattaagagattcaacttcatcctggtttagtcttgggagaatgtgtgtgtcgagtaatttatcaatttcttctagattttctagtttatttgtgtagaggtgtttatagtagtctctgatggtcgtttgtatttctgtgggatcggtggtgatatcccctttatcattttttattgcatctatttgattcttctctcttttcttctttattagtcttgctagcggtctatcaattttgttgatcttttcaaaaaaaaaaccagctcctggattaactgattttttgaagggttttttgtgtctctatctacttcagttctgctctgatcttagttatttcttggcttctgctagcttttgaatgtgtttgctcttgcttctctagttcttttaattgtgatgttagggtgtcaattttagatctttcctgctttctcttgtgggcatttagtgctataaatttccctctacacaccgctttaaatgtgtcccagagattctggtatgttgtgtctttgttctcgttggtttcaaagaacatctttatttctgccttcattttgttatatacccagtagtcattcaggagcaggttgttcagtttccat-tagttgagtggttttgagtgagtttcttaatcctgagttctagtttgatttcactatggtctgagagacagtttattataatttctgttcttttacatttgctgaggagtgctttacttccaactatgtggtcaattttggaataggtgcgggtgtggtgtggagaagaatgtatgttctgttgatttggcgtggagagttctatagatgtctattaggtccacttggtgcagagctcagttcaattcctgcatatccttgttaactttctgtctcattgatctgtctaatgttgacagtggggtgttaaagtctcccattattattgtgtgggagtctaagtctctttgtaggtctctaaggacttgctttatgaatctgggcgatcctgtattaggtgcatatatatttaggatagttagctctt---gttgaattgatccctttaccattatgtaatggccttctttgtctcttttgatctttgttggtttaaagtctgttttatctgagactaggattgcaacccctgccttttttt-gttttctatttgcttggtagatcttcctccgtccctttattttgagcctatgtgtgtctctgcatgtgagatgggtttcctgaatacagcacactgatgggtcttgactctttatccaatttgccagtctgtgtcttttaattggagcatttagcccatttacatttaaggttaattttgttatgtgtgaatttgatcctgtcattatgatgttagctggttattttgctcattagttgatgcagtttcttcctagcatcgatggtctttacaatttggcatgtttttgcagtggctg s panTro5.chr2A 1344410 3214 + 111504155 gtagattgcaaaaattttctcccattctgtaggttgcctgttcactctgatggtagtttcttttgctgtgcagaagctctttagtttaattagatcccatttgtcaattttggcttttgttgccattgcttttggtgttttagccatgaagtccttgcccatgcctatgtcctgaatggtattgcctaggttttcttctaggttttcttctaggtctaacatttaagtctttaatccatcttgaattaacttttgtataaggtgtaaggaaaggatccag-tttcagctttctacatatggctagccagttttcccagcaccgtttgttaaatagggaatcctttccccatttcttgtttttgtcaggtttgtcaaagatcagatagtagtagatgtgtggcattatttctgagggctctgttctgttccattggtctatatgtctgtttggtaccagtaccatgctgttttggttactgtagccttgtagtatagtttgaagtcaggtagcgtgatgcctccagctatgttctttggcttaggattgacttggcaaagcaggctcttttttggttccatatgaactgtagttttttccaattctgtgaagaaagtcattggtagcttcatggggatggcactgaatctataaattaccttgggcagtatggccattttcacaatatttattcttcctatccatgagcatgtaatgttcttccatttgtttgtgtcctcctttatttcattgagcagtggtttgtagttctccttgaagaggtccttcacatcccttgtaagttgcattcctaggtattttattctctttgaagcaattgtgaatgggagttcactcatgatttggctctctgtttgtctgttattggtgtataagaatgcttgtgatttttgtacattgattttgtatcctgagactttactgaagttgcttatcagctgaaggagattttgggctgagacaatggggttttctaaatatacaatcatgtcatctgtgaacagggacaatttgactttctttttccctaattgaataccctttatttctttctcctgcctgattgccctggccagaacttccaacactatgttgaataggagtggtgagagaaggcatccctgtcttgtgccagttttcaaagggaatgcttccagtttttgaccattcagtatgatatcggctgtgggtttgtcataaatagctgttattatttttagatatatcctttcaatacctaatttattgagagtttttagcatgaagagctgttgaattttgtcaaaggccttttctgcatctattgagataatcatgtggtttttgtctttggttctgtttatatgctggattacgtttattgatttgcgtatgttgaaccagccttgcatcccagggatgaagcccacttgatcatggtggataagctttttgatgtgctgctggattcggtttgccagtattttattgaggatttttgcatcaatgttcatcagggatattgatctaaaattctctttttttgttgtgtctctgccaggctttggtatcaggatgatgttggcctcataaaatgagttagggaggattccctctttttgtattgattggaatagtttcagaaggaatggcaccagctcctccttgtacctctggtagaattcggctgtgaatctgtccagtcctggactttttttggttggtaggctattaattattgcctcaatttcagagcctgttgttggtctattaagagattcaacttcatcctggtttagtcttgggagagtatgtgtgtcaagtaatttatccatttcttctagattttctagtttatttgtgtagaggtgtttatagtagtctctgatggtcgtttgtatttctgtgggatcggtggtgatatcccctttatcattttttattgcatctgtttgattcttctctcttttcttctttattagtcttgctagcgatctatcaattttgttgatcttttcaaaaaaaa--ccagctcctggattcactgattttttgaagggttttttgtgtctctatctacttcagttctgctctgatcttagttatttcttgccttctgctagcttttgaatgtgtttgctcttgcttttctagttcttttaattgtgatgttagggtgtcaattttagatctttcctgctttctcttgtgggcatttagtgctataaatttccctctacacactgctttaaatgtgtcccagagattctggtatgttgtgtctttgttctcgttggtttcaaagaacatctttatttcagccttcatttcgttatgtacccagtattcattcaggagcaggttgttcagtttccatgtagttgagcagttttgagtgagtttcttaatcctgagttctagtttgattgcactatggtctgagagacagtttattataatttctattgttttacatttgctgaggagtgctttacttccaactatgtggtcaattttggaataggtgagggtgtggtgtggagaagaatgtatgttctgttgatttggggtggagagttctatagatgtctattaggtccacttggtgcagagctcagttcaattcctgcatatccttgttaactttctgtctcgttgatctgtctaatgttgacagtggggtgttaaagtctcccattattattgtgtgggagtctaagtctctttgtaggtctctaaggacttgctttatgaatctgggtgatcctgtattaggtgcatatatatttaggatagttagctcttcttgttgaattgatccctttaccattatgtaatggccttctttgtctcttttgatgtttgttggtttaaagtctgttttatctgagactgggattgcaacccgtgccttttttttgttttctatttgcttggtagatcttcctctgtccctttattttgagcctatgtgtgtctctgcatgtgagatgggtttcctgaatatagcacactgatgggtcttgactctttatccaatttgccagtctgtgtcttttaattggagcatttagcccatttacatttaaggttaattttgttatgtgtgaatttgatcctgtcattatgatgttagctggtcattttgctcgttagttgatgcagtttcttcctagcatcgatggtctttacaatttggcatgtttttgcagtggctg i panTro5.chr2A I 299 C 0 s panPan2.chr2A 1304571 3213 + 114371477 gtagattgcaaaaattttctcccattctgtaggttgcctgttcactctgatggtagtttcttttgctgtgcagaagctctttagtttaattagatcccatttgtcaattttggcttttgttgccattgcttttggtgttttagccatgaagtccttgcccatgcctatgtcctgaatggtattgcctaggttttcttctaggttttcttctaggtctaacatttaagtctttaatccatcttgaattaacttttgtataaggtgtaaggaaaggatccag-tttcagctttctacatatggctagccagttttcccagcactgtttgttaaatagggaatcctttccccatttcttgtttttgtcaggtttgtcaaagatcagatagtagtagatgtgtggcattatttctgagggctctgttctgttccattggtctatatgtctgtttggtaccagtaccatgctgttttggttactgtagcctcatagtatagtttgaagtcaggtagcgtgatgcctccagctatgttctttggcttaggattgacttggcaaagcaggctcttttttggttccatatgaactgtagttttttccaattctgtgaagaaagtcattggtagcttcatggggatggcactgaatctataaattaccttgggcagtatggccattttcacaatatttattcttcctatccatgagcatgtaatgttcttccatttgtttgtgtcctcctttatttcattgagcagtggtttgtagttctccttgaagaggtccttcacatcccttgtaagttggattcctaggtattttattctctttgaagcaattgtgaatgggagttcactcatgatttggctctctgtttgtctgttattggtgtataagaatgcttgtgatttttgtacattgattttgtatcctgagacttttctgaagttgcttatcagctgaaggagattttgggctgagatgatggggttttctaaatatacaatcatgtcatctgtgaacagggacaatttgactttctttttccctaattgaataccctttatttctttctcctgcatgattgccctggccagaacttccaacactatgttgaataggagtggtgagagaaggcatccctgtcttgtgccagttttcaaagggaatgcttccagtttttgaccattcagtatgatatcggctgtgggtttgtcataaatagctgttattatttttagatatatcctttcaatacctaatttattgagagtttttagcatgaagggctgttgaattttgtcaaaggccttttctgcatctattgagataatcatgtggtttttgtctttggttctgtttatatgctggattacgtttattgatttgcgtatgttgaaccagccttgcatcccagggatgaagcccacttgatcatggtggataagctttttgatgtgctgctggattcggtttgccagtattttattgaggatttttgcatccatgttcatcagggatattgatctaaaattctctttttttgttgtgtctctgccaggctttggtatcaggatgatgttggcctcataaaatgagttagggaggattccctctttttgtattgattggaatagtttcagaaggaatggcaccagctcctccttgtacctctggtagaattcggctgtgaatctgtccagtcctggactttttttggttggtaggctattaattattgcctcaatttcagagcctgttgttggtctattaagagattcaacttcatcccggtttagtcttgggagagtatgtgtgtcaagtaatttatccatttcttctagattttctagtttatttgtgtagaggtgtttatagtagtctctgatggtcgtttgtatttctgtgggatcggtggtgatatcccctttatcattttttattgcatctgtttgattcttctctcttttcttctttattagtcttgctagcgatctatcaattttgttgatcttttcaaaaaaaa--ccagctcctggattcactgattttttgaagggttttttgtgtctctatctacttcagttctgctctgatcttagttatttcttgccttctgctagcttttgaatgtgtttgctcttgcttttctagttcttttaattgtgatgttagggtgtcaattttagatctttcctgctttctcttgtgggcatttagtgctataaatttccctctacacactgctttaaatgtgtcccagagattctggtatgttgtgtctttgttctcgttggtttcaaagaacatctttatttcagccttcatttcgttatgtacccagtattcattcaggagcaggttgttcagtttccatgtagttgagcagttttgagtgagtttcttaatcctgagttctagtttgattgcactatggtctgagagacagtttattataatttctattgttttacatttgctgaggagtgctttacttccaactatgtggtcaattttggaataggtgagggtgtggtgtggagaagaatgtatattctgttgatttggggtggagagttctatagatgtctattaggtccacttggtgcagagctcagttcaattcctgcatatccttgttaactttctgtctcgttgatctgtctaatgttgacagtgggatgttaaagtctcccattattattgtgtgggagtctaagtctctttgtaggtctctaaggacttgctttatgaatctgggtgctcctgtattaggtgcatatatatttaggatagttagctcttcttgttgaattgatccctttaccattatgtaatggccttctttgtctcttttgatctttgttggtttaaagtctgttttatccgagactgggattgcaacccctgccttttttt-gttttctatttgcttggtagatcttcctctgtccctttattttgagcctatgtgtgtctctgcatgtgagatgggtttcctgaatatagcacactgatgggtcttgactctttatccaatttgccagtctgtgtcttttaattggagcatttagcccatttacatttaaggttaattttgttatgtgtgaatttgatcctgtcattatgatgttagctggtcattttgctcgttagttgatgcagtttcttcctagcatcgatggtctttacaatttggcatgtttttgcagtggctg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1329456 3128 + 1464242 gtagattacaaaaattttctcccattctgtaggttgcctgttcactctgatggtagtttcttttgctgtgcagaagctctttagtttaattagatcccatttgtcaattttggcttttgttgccattgcttttggtgttttagccatgaagtccttgcccatgcctatgtcctgaatggtattgc------------ctaggttttcttctaggtctaacatttaagtctttaatccatcttgaattaacttttgtataaggtgtaaggaaagggtccagttttcagctttctacatatggctagccagttttcccagcaccgtttgttaaatagggaatcctttccccatttcttgtttttgtcaggtttgtcaaagatcagatagttgtagatgtgtggcattatttctgagggctgtgttctgttccattggtctatatgtctgtttggtaccagtaccatgctgttttggttactgtagccttgtagtatagtttgaagtcaggtagcatgatgcctccagctatgttctttggcttaggattgacttggcaaagcaggctcttttttggttccatatgaactgtagttttttccaattctgtgaagaaagtcattggtagcttcatggggatggcactgaatctataaattaccttgggcagtatggccattttcacaatatttattcttcctatccatgagcatgtaatgttcttccatttgtttgtgtcctcctttatttcattgagcagtggtttgtagttctccttgaagaggtccttcacatcccttctaagttggattcctaggtattttattctctttgaagcaattgtgaatgggagttcactcatgatttggctctctgtttgtctgttattggtgtataagaatgcttgtgatttttgtacattgattttgtatcctgagactttgctgaagttgcttatcagcttaaggagattttgggctgagacgatggggttttctaaatatacaatcatgtcatatgtgaacatggacaatttgacttcctcttttcctaactgaatacactttatttctttctcctgcctgattgccctggccagaacttccaacactatgttgaataggagtggtgagagagggcatccctgtcttgtgccagttttcaaagggaatgcttccagtttttgcccattccgtatgatatcagctgtgggtttgtcataaatagctgttattatttttagatatatcccatcaatacctaatttattgagagtttttagcatgaaaggctgttgaattttgtcaaaggccttttctgcatctattgagataatcatgtggtttttgtctttggttctgtttatatgctggattacgtttattgatttgcatatgttgaaccagccttgcatcccagggatgaagcccactcgatcatggtggataagctttttgatgtgctgctggattcgttttgccagtattttattgaggatttttgcatcaatgttcatca-ggatattggtctaaaattatctttttttgttgtgtctctgcccggctttggtatcaggatgatgctggcctcatagaatgagttagggaggattccctctttttgtattgattggaatagtttcagaaggaatggtaccagctcctccttgtacctctggtagaattcggctgtgaatctgtccagtcctggactttttttggttggtaagctattaattattgcctcaatttcagagcctgttgctggtctattaagagattcaacttcatcctggtttagtcttgggagagtatgtgtgtcgagtaatttatccatttcttctagattttctagtttatttgtgtagaggtgtttatagtagtctctgatggtca--------tctgtggga----------------------------------------------------------tcttctttattagtcttgctagcggtctatcaattttgttgatcttttcaaaaaaaa--ccagctcctggattcactgattttttgaa-ggttttttgtgtctctatttccttcagttctgctcggattttagttatttcttgccttctgctagcttttgaatgtgtttgctcttgcttctctagttcttttaattgtgacgttagggtgtcaattttagatctttcctgctttctcttgt-ggcatttagtgctataaatttccctctacacactgctttaaatgtgtcccagagattctggtatgttgtgtctttgttctcgttggtttcaaagaacatctttatttcagccttcatttcattatgtacccagtattcattcaggagcaggttgttcagtttccatgtagttgagcag-tttgagtgagtttcttaatcctgagttctagtttgattgcactatggtctgagagacagtttattataatttctattgttttacatttgctgaggagtgctttacttccaactatgtggtcaattttggaataggtgagggtgtggtgcggagaagaatgtatgttctgttgatttggggtggagagttctatagatgtctattaggtccacttggtgcagagctcagttcaattcctgcatatccttgttaactttctgtctcgttgatctgtctaatgttgacagtggggtgttaaagtctcccattattattgtgtgggagtctaagtctctttgtaggtctctaaggacttgctttatgaatctggatgctcctgtattaggtgcatgtatatttagga----tagctcttcttgttgaattgatacctttactattatgtaatggccttctttgtctcttttgatctttgttggtttaaagtctgttttatccgagactaggattgcaacccctgccttttttt-gttttctatttgcttggtagatcttcctctgtccctttattttgagcctatgtgtgtctctgcatgtgagatgggtttcctgaatatagcacactgatgggtcttgactctttatccaatttgccagtctgtgtcttttaattggaacatttagcccatttacatttaaggttaattttgttatgtgtgaatttgatcctgtcattatgatgttagctggttattttgctcgttagttgatgcagtttcttcctagcatcgatggtctttacaatttggcatgtttttgcagtggctg i gorGor5.CYUI01015607v1 C 0 C 0 e aotNan1.NW_018513311v1 70483 1853 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1189810 2274 - 7082604 I e cebCap1.NW_016107827v1 1281330 2181 + 1864846 I e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I e calJac3.chr14 1339557 1791 - 108792865 I e colAng1.NW_012118821v1 1324541 1900 - 13651311 I e manLeu1.NW_012103754v1 891438 1905 - 2200435 I e chlSab2.chr14 1415614 2320 - 107702431 I e cerAty1.NW_012000820v1 1342733 1908 - 10304083 I e macNem1.NW_012011978v1 1389398 1900 + 3644372 I e macFas5.chr13 1360909 1881 - 111193037 I e rheMac8.chr13 1388609 1897 + 108979918 I e nomLeu3.chr19 1052267 2520 + 81552678 M a score=1779028.000000 s hg38.chr2_KI270774v1_alt 70039 2015 + 223625 gtaccagttgttcctttccatgtttagtgcttccttcaggaactcttttagggcaggcctggtggtgacaaaatctctcagcatttgcttgtctgtaaaggattttatttctctttcacttacaaagcttagtttggctggatctgaaattctgggttgaaaattcttttctttaagtatgttgaatattggcccccactctcttctggcttgtagagtttctgccaagagatcagctgttagtctgatgggcctccctttgtgggtaacccgacctttctctctggctgcccttaacattttttccttcatttcaactttggtgaatctgacaattatgtgtcttggagttgctcttctcgaggagtatctttgtggtattctctgtatttcct-aatttgaatgttggcctgccttgctaggttggggatgttctcctggataatatactgcagagtgttttccaacttggttccattgtccccatcactttcaggtacaccaatcagacatagatttggtcttttcacatagtcccatatttcttggaggctttgttcatttctttttattcttttttctctaaacttctcttctcacttcacttcattcatttgatcttcaatcactgataccctttcttccagttgatcgaattggctactgaagcttgtgcattcatcacatagttcttgtgccttggttttcagcttcagcaggtcctttaaggacttctctgcattggttattctagttagccattcgtctaatcttttttcaaggtttttaacttctttgcgatgggctcgaacttcctcctttagcttggagaagtttgattatctgaagctttcttctctcagctcgtcaaagtcattctttgtccagctttgttccattgctggtgaggagctgcgttcctttggaggaggagaggcactc-gatttttagaattttcagtttttctgttctgttttttcctcatctttgtggttttatctacctttggtctttgatgatggtgacatacagatggggttttggtgtggatgtcctttctgtttgttagttttccctctaacagacaggaccctcagctgcaggtctgttggagtttgctggaggtcccctccagaccctgtttgcctgggtatcagcagcagaggctgcagaacagtgaatattgctgaacagcaaatgttgctgtctgatccttcctctggaggtttcgtctcagaggggtacccggctgtgtgaggtgtcagtctgcccctactcgggggtgcctcccagttaggctacttgggggttagggaccctcttgaggaggcagtctgtccgttctcagatcacaaactccatgctgggagaaccattactctcttcaaacctgtcagacagggacatttaagtctgcagaggtttctgctgccttttgtttgtctgtgccctgcccccagaggtggagtctacagaggcaggcaggcctccttgagctgtggtgggctccacccagttcgagcttcctggccgctttgtttacctactcaagcctcagcaatggcgggtgcccctcccccagcctcgctgccgccttgcagttggatctcagactgctgtgttagcagtgagcgaggctctgtgggtgtaggaccctccgagccaggcgtagggtataatctcctggtgtgccgtttgctaagaccattggaaaagcgcagtattatggtgggagtgacccgattttccagctgccgtctgtcacagctttgcttggctatgaaagggaatttccctgacctcttgcacttcccaggtgaggtgatgcctcgccctgctttggctcacactcggtgtgctgcatgcactgtcctgcacccactgtctgacaagccccagtgagatgaacctggtacctcagttggaaatgcagaaatcacccatcttctgcgtcgctcacactgggagctgtagactggagctcttcctatttggccatcttggAACTGCCCGAC s panTro5.chr2A 1347624 2009 + 111504155 gtaccagttgttcctttccatgtttagagcttccttcaggagctcttttagggcaggcctggtggtgacaaaatctctcagcatttgcttgtctgtaaaggattttatttctccttcacttacgaagtttagtttggctggatctgaaattctgggttgaaaattcttttctttaagtatgttgaatattgacccccactctcttctggcttgtagagtttctgccgagagatcagctgttagtctgatgggcctccctttgtgggcaacctgacctttctctctggctgcccttaacattttttccttcatttcaactttggtgaatctgacaattatgtgtcttggagttgctcttctcgaggagtatctttgtggcattctctgtatttcct-aatttgaatgttggcctgccttgctagattagggaagttctcctggataatatcctgcagagtgttttccaacttggttccattctccccatcactttcaggtacaccaatcagacatagatttggtcttttcacatagtcccatatttcttggaggctttgttcatttctttttattcttttttctctaaacttctcttctcgcttcatttcattcatttgatcttcaatcactgataccctttcttccagttgatcgaattggctactgaagcttgtgcattcatcacatagttctcgtgccttggttttcagcttcatcaggtcctttaaggacttctctgcattggttattctagttagccatttgtctaatcttttttcaaggtttttaacttctttgcgatgggctcgaacttcctcctttagctcggagaagtttgattgtctgaagccttcttctctcaactggtcaaagtcattctccgtccagctttgttccattgctggtgaggagctgcgttcctttggaggaggagaggcactc-gatttttagaattttcagtttttctgttctgttttttccccatctttgtggttttttctacctttggtctttgatgatggtgacatacagatggggttttggtgtggacgtcctttctgtttgttagttttccctctaacagtcaggaccctcagctgcaggtctgttggagtttgctggaggtccactccagaccctgtttgcctgggtatcagcagcagaggctgcagaacagcgaatattgctgaacagcaaatgttgctgtctgatccttcctctggaggtttcgtctcagaggggtacccggctgtgtgaggtgtcagtctgcccctactcgggggtgcctcccagttaggctactcgggggttagggaccctcttgaggaggcagtctgtccgttctcagatcacaaactccatgctgggagaaccattactctcttcaaacctgtcagacagggacatttaagtctgcagaggtttctgctgccttttgt----ctgtgccctgcccccagaggtggagtctacagaggcaggcaggcctccttgagctgcggtgggctccacccagttcgagcttcctggccgctttgtttacctactcaagcctcagcattggcgggtgcccctcccccagcctcgctgccgccttgcagttggatctcagactgctgtgttagcagtgcgcgaggctctgtgggtgtaggaccctctgagccaggtg-ggggtataatctcttggtgtgccgtttgctaagaccattggaaaagcacagtattatggtgggagtgacccgattttccagctgccgtctgtcacagctttgcttggctatgaaagggaatt-ccctgacctcttgtacttcccaggtgaggtgatgcctcgccctgctttggctcacactcagtgtgctgcatgcactgtcctgcacccactgtccgacaaaccccagtgagatgaacctggtacctcagttggaaatgcagaaatcacccatcttctgcgtggctcacactgggagctgtagactggagctcttcctatttggccatcttggaaccacccGAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1307784 2010 + 114371477 gtaccagttgttcctttccatgtttagcgcttccttcaggagctcttttagggcaggcctggtggtgacaaaatctctcagcatttgcttgtctgtaaaggattttatttctccttcacttacgaagcttagtttggctggatctgaaattctgggttgaaaattcttttctttaagtatgttgaatattgacccccactctcttctggcttgtagagtttctgccgagagatcagctgttagtctgatgggcctccctttgtgggcaacctgacctttctctctggctgcccttaacattttttccttcatttcaactttggtgaatctgataattatgtgtcttggagttgctcttctcgaggagtatctttgtggcattctctgtatttcct-aatttgaatgttggcctgccttgctaggttggggaagttctcctggataatatcctgcagagtgttttccaacttggttccattctccccatcactttcaggtacaccaatcagacatagatttggtcttttcacatagtcccatatttcttggaggctttgttcatttctttttattcttttttctctaaacttctcttctcgcttcatttcattcatttgatcttcaatcactgataccctttcttccagttgatcgaattggctactgaagcttgtgcattcatcacatagttctcgtgccttggttttcagcttcatcaggtcctttaaggacttctctgcattggttattctagttagccatttgtctaatcttttttcaaggtttttaacttctttgcgatgggctcgaacttcctcctttagctcggagaagtttgattgtctgaagccttcttctctcaactggtcaaagtcattctccgtccagctttgttccattgctggtgaggagctgcgttcctttggaggagaagaggcactc-gatttttagaattttcagtttttctgttctgttttttccccatctttgtggttttttctacctttggtctttgatgatggtgacatacagatggggttttggtgtggacgtcctttctgtttgttagttttccctctaacagtcaggaccctcagctgcaggtctgttggagtttgctggaggtccactccagaccctgtttgcctgggtatcagcagcagaggctgcagaacagcgaatattgatgaacagcaaatgttgctgtctgatccttcctctggaggtttcgtctcagaggggtacccggctgtgtgaggtgtcagtctgcccctactcgggggtgcctcccagttaggctactcgggggttagggaccctcttgaggaggcagtctgtccgttctcagatcacaaactccatgctgggagaaccattactctcttcaaacctgtcagacagggacatttaagtctgcagaggtttctgctgccttttgt----ctgtgccctgcccccagaggtggagtctacagaggcaggcaggcctccttgagctgcggtgggctccacccagttcgagcttcctggccgctttgtttacctactcaagcctcagcattggcgggtgcccctcccccagcctcgctgccgccttgcagttggatctcagactgctgtgttagcagtgcgcgaggctctgtgggtgtaggaccctctgagccaggcgtggggtataatctcctggtgtgccgtttgctaagaccattggaaaagcacagtattatggtgggagtgacccgattttccagctgccgtctgtcacagctttgcttggctatgaaagggaatt-ccctgacctcttgcacttcccaggtgaggtgatgcctcgccctgctttggctcacactcggtgtgctgcatgcactgtcctgcacccactgtccgacaagccccagtgagatgaacctggtacctcagttggaaatgcagaaatcacccatcttctgcgtggctcacactgggagctgtagactggagctcttcctatttggccatcttggaaccacccGAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1332584 2012 + 1464242 gtaccagttgttcctttccatgtttagtgcttccttcaggagctcttttagggcaggtctggtggtgacaaaatctctcagcatttgcttgtctgtgaaggattttatttctccttcacttatgaagcttagtttggctggatctgaaattctgggttgaaaattcttgtctttaagtatgttgaatattggcccccactctcttctggcttatagagtttctgccgagagatcagctgttagtctgatgggcctccctttgtgggcaacccgacctttctctctggctgcccttaacattttttccttcatttcaactttggtgaatctgacaattatgtgtcttggagttgctcttctcgaggagtatctttgtggcattctctgtatttcct-aatttgaatgttggcctgccttgctaggttggggaagttctcctggataatatactgcagagtgttttccaacttggttccattctccccatcactttcaggtacaccaatcagacatagatttggtcttttcacatagtcccatatttcttggaggctttgttcatttctttttattcttttttctctaaacttctcttctcacttcatttcattcatttgatcttcaatcactgataccctttcttccagttgattgaattggctactgaagcttgtgcattcatcacacagttctcgtgccttggttttcagcttcatcaggtcctttaaggacttctctgcattggttattctagttagccatttgtctaatcttttttcaaggtttttaacttctttgcgatgggctcgaacttcctcctttagctcggagaagtttgattgtctgaagccttcttctctcaactcgtcaaagtcattctccgtccagctttgttccattgctggtgaggagctgcgttcctttggaggaggagaggcattc-gatttttagaattttcagtttttctgttctgttttttccccatctttgtggttttatctacctctggtctttgatgatggtgacatacagatggggttttggtgtggatgtcctttctgtttgttagttttccctctaacagtcaggaccctcagctgcaggtctgttggagtttgctggaggtccactccagaccctgtttgcctgggtatcagcagcagaggctgcagaacagcgaatattgctgaacagcaaatgttgctgtctgatccttcctctggaggtttcgtctcagaggggtacccggctgtgtgaggtgtcagtctgcccctcctcgggggtgcctcccagttaggctacttgggggttagggaccctcttgaggaggtagtctgtccgttctcagatcacaaactccatgctgggagaaccattactctcttcaaacctgtcagacagggacatttaagtctgcagaggtttctgctgccttttgtttgtctgtgccctgcccccacaggtggagtctacagaggcaggcaggcctccttgagctgcggtgggctccacccagttcgagcttcctggccgctttgtttacctactcaagcctcagcaatggcggatgcccctcccccagcctggctgccgccttgcagttggatctcagactgctgtgttagcagtgagcaaggctctgtgggcataggaccctccgagccaggcgtggggtataatctcctggtgtgcc-tttgctaagaccgttggaaaagcgcagtattatggtgggag-gacccgattttccagctgccgtctgtcacagctttgctttgctatgaaagggaatt-ccctgaccccttgcgcttcccaggtgaggtgatgcttcaccctgcttcggctcacactcggtgtgctgcgggcactgtcctgcacccactgtccgacaagccccagtgagatgaacccggtacctcagttggaaatgcagaaatcacccatcttctgcgtcgctcacactgggagctgtagactggagctcttcctatttggccatcttggaaccacccGAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1054846 2011 + 81552678 gtaccagttgttcctttccatgtttagtgcttccttgaggagctcttttagggcaggcctggtggtgacaaaatctctcagcatttgcttgtctgtaaaggatgttatttctgcttcacttatgaagcttagtttggccggatatgaaattctgggttgaaaattcttttctttaagaatgttgaatatcggcccccactctcttctggcttgtagagtttctgccaagagatcaactgttagtctgatgggcttccctttgtgggtaacccgacctttttctctggctgcccttaacattttttctttcatttcaactttggtggatctgacaattatgtgtcttggagttgctcttcttaaggagtatctttgtggcgttctctgtatttcctgaatttgaatgtt-gcctgccttgctaggttggggaagttctcccggataatatcctgcagagtgttttccaacttggttccattctccccatcactttcaggtacaccaatcagacatagatttggtcttttcacatagtcccatatttcttggaggctttgttcgtttctttttattcttttttctctaaacttctcttctctcttcatttcattcatttgatcttcaatcactgataccctttcttccagttgatcgaatcggctactgaagcttatgcattcatcacgtagttctcatgccatggttttcagctccatcaggtcctttgaggacttctctgcattggttattctagttagccattcgtctaatcttttttcaaggtttttaacttctttgcgatgggttcaaacttcctcctttagctcggagaagtttgatcatctgaagccttcttctctcaactcgtcaaagtcattctccgtccagctttgttctgttgctggtgaggagctgcgttcctttggaggaggagaggcactctgatttttagaattttcggtttttctgttctgttttttccccatttttgtagttttatctacccttggtctttgatgatggtgacatacagatggggttttggggtggatgtcctttctgtttgttagttttccttccagcagtcaggaccctcagctgcaggtctgttggagtttgctggaggtccactccagaccctgtttgcctgggtatcagcagtggaggctgcagaacagcgaatattgctgaacagcaaatgttgctgtctgatcgttcctctggaggttttgtctcagaggggtacccagccatgtgaggtgtcaatctgcccctactggggggcgcctcccagttaggctactcaggggtcagggacccacttgaggaggcagtctgtccattctcagatcacaaactccatgctgggagaaccactactctcttcaaagttgtcagacagggacatttaagtctgcagaggattctgctgccttttgttcagctatgccctg-ccccagaggtggagtctacagaggcaggcaggcctccttaagctgtggtgggctccacccagttcgagcttcccagccgctttgtttacctactcaagcctcaccaatggtgggtgcccctcccccagcctccctgccctcttgcagttccatctcaga---ctgtgctagcaatgagcgaggctccatggacgtgggaccctccaagccaggtgtgggatataatctcctggtgtgctgtttgctaagaccattggaaaagcacagtattagggtgggagtgacccaattctccaggtgccatttgtcacagctttgcttggctatgaaagggaatt-ccctgaccccttgcacttcccgggtgaggcaatgcctcgccctgcttcagctcacactcggtgcgctgcacccactgtcctgcacccactgtccgacaagccccagtgagatgcacccggtacctcagttggaaatgcagaaataacctgtcttctgcatcgctcacgctgggagctgtagactgtggctgttcctattcagccatcttggAACCACCTGAC i nomLeu3.chr19 M 2520 C 0 e aotNan1.NW_018513311v1 70483 1853 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1189810 2274 - 7082604 I e cebCap1.NW_016107827v1 1281330 2181 + 1864846 I e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I e calJac3.chr14 1339557 1791 - 108792865 I e colAng1.NW_012118821v1 1324541 1900 - 13651311 I e manLeu1.NW_012103754v1 891438 1905 - 2200435 I e chlSab2.chr14 1415614 2320 - 107702431 I e cerAty1.NW_012000820v1 1342733 1908 - 10304083 I e macNem1.NW_012011978v1 1389398 1900 + 3644372 I e macFas5.chr13 1360909 1881 - 111193037 I e rheMac8.chr13 1388609 1897 + 108979918 I a score=29042.000000 s hg38.chr2_KI270774v1_alt 72054 5 + 223625 GTTAA s panTro5.chr2A 1349633 5 + 111504155 GATAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1309794 5 + 114371477 GATAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1334596 5 + 1464242 GTTAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1056857 5 + 81552678 ATTAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1390506 5 + 108979918 GTTAG i rheMac8.chr13 I 1897 C 0 s macFas5.chr13 1362790 5 - 111193037 GTTAG i macFas5.chr13 I 1881 C 0 s macNem1.NW_012011978v1 1391298 5 + 3644372 GTTAG i macNem1.NW_012011978v1 I 1900 C 0 s cerAty1.NW_012000820v1 1344641 5 - 10304083 GTTAG i cerAty1.NW_012000820v1 I 1908 C 0 s chlSab2.chr14 1417934 5 - 107702431 GTTAG i chlSab2.chr14 I 2320 C 0 s manLeu1.NW_012103754v1 893343 5 - 2200435 GTTAG i manLeu1.NW_012103754v1 I 1905 C 0 s calJac3.chr14 1341348 5 - 108792865 GTTAG i calJac3.chr14 I 1791 C 0 s aotNan1.NW_018513311v1 72336 5 + 287728 GTTAG i aotNan1.NW_018513311v1 I 1853 C 0 e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1189810 2274 - 7082604 I e cebCap1.NW_016107827v1 1281330 2181 + 1864846 I e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I e colAng1.NW_012118821v1 1324541 1900 - 13651311 I a score=43043.000000 s hg38.chr2_KI270774v1_alt 72059 5 + 223625 TCATC s panTro5.chr2A 1349638 5 + 111504155 TCATC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1309799 5 + 114371477 TCATC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1334601 5 + 1464242 TCATC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1056862 5 + 81552678 TCATC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1390511 5 + 108979918 TCATC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1362795 5 - 111193037 TCATC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1391303 5 + 3644372 TCATC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1344646 5 - 10304083 TCATC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1417939 5 - 107702431 TCATC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 893348 5 - 2200435 TCATC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1326441 5 - 13651311 TCATC i colAng1.NW_012118821v1 I 1900 C 0 s calJac3.chr14 1341353 5 - 108792865 TCATC i calJac3.chr14 C 0 C 0 s aotNan1.NW_018513311v1 72341 5 + 287728 TCATC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1189810 2274 - 7082604 I e cebCap1.NW_016107827v1 1281330 2181 + 1864846 I e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I a score=941551.000000 s hg38.chr2_KI270774v1_alt 72064 119 + 223625 TAAATAAAGTATTTCCACCTGTACCTTCCTAGACGGGT--CAGAATTCTCTAAAGAAAATTTTAGGGTACACTTTTGCCCCAAATAAGTGAATAAAAATCAATTTGGGGATACATTCTTGT s panTro5.chr2A 1349643 119 + 111504155 TAAATAAAGTATTTCCACCTGTACCTTCCTAGACGGGT--CAGAATTCTCTAAAGAAAATTTTAGGGTACATTTTTGCCCCAAATAAGTGAACAAAAATCAATTTGGGGATACATTCTTGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1309804 119 + 114371477 TAAATAAAGTATTTCCACCTGTACCTTCCTAGACGGGT--CAGAATTCTCTAAAGAAAATTTTAGGGTACATTTTTGCCCCAAATAAGTGAACAAAAATCAATTTGGGGATACATTCTTGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1334606 119 + 1464242 TAAATAAAGTATTTCCACCTGTACCTTCCTAGATGGGT--CAGAATTCTCTAAAGAAAATTTTAGGGTACATTTTTGCCCCAAATAAGTGAACAAAAATCAATTTGGGGATACATTCTTGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1056867 119 + 81552678 CAACTAAAGTATTTCCACCTGCACCTTCCTAGGCAGGT--CAGAATTTTCTAAAGAAAAATTTAGGGTACATTTTTGCCCCAAATAAGTGAGCAAAAATGAATTTGGGGATACATTCTTGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1390516 119 + 108979918 TAAACAAAGTATTTCCACCTGCACCTTCCTGTGCAGGT--CAGAATTTTCTAAAGAAAAGTTTAGGGTACATTTTTGCCCCAAATAAGTGAACAAAAATCAATTGGGGGATACATTCTTGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1362800 119 - 111193037 TAAACAAAGTATTTCCACCTGCACCTTCCTGTGCAGGT--CAGAATTTTCTAAAGAAAAGTTTAGGGTACATTTTTGCCCCAAATAAGTGAACAAAAATCAATTGGGGGATACATTCTTGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1391308 119 + 3644372 TAAACAAAGTATTTCCACCTGCACCTTCCTGTGCAGGT--CAGAATTTTCTAAAGAAAAGTTTAGGGTACATTTTTGCCCCAAATAAGTGAACAAAAATCAATTGGGGGATACATTCTTGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1344651 119 - 10304083 TAAACAAAGTATTTCCACCTGCACCTTCCTGTGCAGGT--CAGAATTTTCTAAAGAAAAGTTTAGGGTACATTTTTGCCCCAAATAAGTGAGCAAAAATCAATTTGGGGATACATTCTTGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1417944 102 - 107702431 TAAATAAAGTATTTCCACCTG-------------------CAGAATTTTCTAAAGAAAAGTTTAGGGTACATTTTTGCCCCAAATAAGTGAGCAAAAATGAATTTGGGGATACATTCTTGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 893353 119 - 2200435 TAAACAAAGTATTTCCACCTGCACCTTCCTGTGCAGGT--CAGAATTTTCTAAAGAAAAGTTTAGGGTACATTTTTGCCCCAAATAAGTGAGCAAAAATCAATTTGGGGATACATTCTTGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1326446 119 - 13651311 TAAACAAAGTATTTCCACCTGCACCTTCCTGTGCAGGT--CAGAATTTTCTAAAGAAAAGTTTAGGGTACATTTTTGCCCCAAATAAGTGAGCAAAAATCAATTTGGGGATACATTATTGT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1341358 120 - 108792865 TACATAAAGTATTTCCACCTGCACTTTCCTGCGTGGGTCACAGAATTCTCCAAATAGAACTTTAGGGCA-ATTTCTGCTCCAAATAAGTGAACAAAAATCAATTTTGGGATGCATTCTTGA i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1283511 120 + 1864846 taaataaaGACTTTCCACCTGCACCTTCCTGCATGGGTCACAGAATTCTCCAAATAGAACTTTAGGGTA-ATTTCTGCTCCAAATAAGTGAACAAGAATCAATTTTGGGATGCATTCTTGA i cebCap1.NW_016107827v1 I 2181 C 0 s aotNan1.NW_018513311v1 72346 120 + 287728 TTCATAGAGTATTTCCACCTGCACCTTCCTGCGTGGGTCACAGAATTCTCCAAATAGAACTTTAGGGTA-ATTTCTGCTCCAAATAAGTGAACAAAAATCAATTTTGGGATGCATTCTTGA i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1189810 2274 - 7082604 I e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I a score=252922.000000 s hg38.chr2_KI270774v1_alt 72183 28 + 223625 TCTAAATAAGTGAACAATTAAGAAGttt s panTro5.chr2A 1349762 28 + 111504155 TCTAAATAAGTGAACAATTAAGAAGTTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1309923 28 + 114371477 TCTAAATAAGTGAACAATTAAGAAGTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1334725 28 + 1464242 TCTAAATAAGTGAACAATTAAGAAgttt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1056986 28 + 81552678 TCTAAATAAGTGAACAACTAAGAAGttt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1390635 28 + 108979918 TCTAAATAAGCAAACAATTAAGAAGttt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1362919 28 - 111193037 TCTAAATAAGCAAACAATTAAGAAGttt i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1391427 28 + 3644372 TCTAAATAAGCAAACAATTAAGAAGttt i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1344770 28 - 10304083 TCTAAATAAGTGAACAATTAAGAAGttt i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1418046 28 - 107702431 TTTAAATAAGCAAACAATTAAGAAGttt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 893472 28 - 2200435 TCTAAATAAGTGAACAATTAAGAAGTTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1326565 25 - 13651311 TCTAAATAAGTGAACAATTAAGAAG--- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1341478 28 - 108792865 TCTACATAAGTGAACCATTAAGAAGTTT i calJac3.chr14 C 0 I 280 s saiBol1.JH378218 1192084 24 - 7082604 TCtaaataaataaa----taagaagttt i saiBol1.JH378218 I 2274 C 0 s cebCap1.NW_016107827v1 1283631 28 + 1864846 TCGACATAAGTGAACAATTAAGAGGTTT i cebCap1.NW_016107827v1 C 0 I 280 s aotNan1.NW_018513311v1 72466 28 + 287728 TCTACATAAGTGAACAATTAAGAAGTTT i aotNan1.NW_018513311v1 C 0 I 292 e mm10.chr12 89962715 21660 - 120129022 I e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I a score=-830.000000 s hg38.chr2_KI270774v1_alt 72211 8 + 223625 ttttgtgt s panTro5.chr2A 1349790 8 + 111504155 TTTTGtgt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1309951 8 + 114371477 TTTTGtgt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1334753 8 + 1464242 ttttgtgt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1057014 8 + 81552678 tttttttg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1390663 5 + 108979918 tt---tgt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1362947 5 - 111193037 tt---tgt i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1391455 5 + 3644372 tt---tgt i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1344798 5 - 10304083 tt---tgt i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1418074 5 - 107702431 tt---tgt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 893500 5 - 2200435 TT---TGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1326590 5 - 13651311 TT---TGA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1192108 4 - 7082604 ---atta- i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 72494 292 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e cebCap1.NW_016107827v1 1283659 280 + 1864846 I e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I e calJac3.chr14 1341506 280 - 108792865 I a score=-24486.000000 s hg38.chr2_KI270774v1_alt 72219 11 + 223625 --------ttt-------attttttt s panTro5.chr2A 1349798 17 + 111504155 --------ttt-ttgtttgtttgttt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1309959 18 + 114371477 --------ttttttgtttgtttgttt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1334761 16 + 1464242 --------ttt-ttgtttgttt-ttt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1057022 8 + 81552678 --------ttt----------ttttt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1390668 4 + 108979918 --------ttt--------------t i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1362952 4 - 111193037 --------ttt--------------t i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1391460 4 + 3644372 --------ttt--------------t i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1344803 4 - 10304083 --------ttt--------------t i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1418079 4 - 107702431 --------ttt--------------t i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 893505 4 - 2200435 --------TTT--------------T i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1326595 3 - 13651311 --------TTT--------------- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1341786 11 - 108792865 TTTATTTTTTT--------------- i calJac3.chr14 I 280 C 0 s saiBol1.JH378218 1192112 10 - 7082604 -ttattttttt--------------- i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 72494 292 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e cebCap1.NW_016107827v1 1283659 280 + 1864846 I e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I a score=24246.000000 s hg38.chr2_KI270774v1_alt 72230 9 + 223625 gtttgtttg s panTro5.chr2A 1349815 9 + 111504155 gtttgtttg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1309977 9 + 114371477 gtttgtttg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1334777 8 + 1464242 gtttg-ttg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1057030 9 + 81552678 gtttgtttg i nomLeu3.chr19 C 0 I 1 s rheMac8.chr13 1390672 9 + 108979918 gtttttgtt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1362956 9 - 111193037 gtttttgtt i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1391464 9 + 3644372 gtttttgtt i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1344807 9 - 10304083 gtttttgtt i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1418083 9 - 107702431 gtttttgtt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 893509 9 - 2200435 GTTTCTGTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1326598 2 - 13651311 -------TT i colAng1.NW_012118821v1 C 0 C 0 s cebCap1.NW_016107827v1 1283939 9 + 1864846 GTTTATTTT i cebCap1.NW_016107827v1 I 280 C 0 e aotNan1.NW_018513311v1 72494 292 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1192122 0 - 7082604 C e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I e calJac3.chr14 1341797 0 - 108792865 C a score=908336.000000 s hg38.chr2_KI270774v1_alt 72239 97 + 223625 ttttattCTGCTGACAGCCAAATCTCTGGGGGA--AAAACAACTGAATAAACTTTTGACAAAGCTGGGCTGGGCTGGCAGCTCACTCAGGAGGGGCAGG s panTro5.chr2A 1349824 97 + 111504155 tttTATTCTGCTGACAGCCAAATCTCTGGGGGA--AAGACAACTGAATAACCTTTTGACAAAGCTGGGCTGGGCTGGCAGCTCACTCAGGAGGGGCAGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1309986 97 + 114371477 tttTATTCTGCTGACAGCCAAATCTCTGGGGGA--AAGACAACTGAATAACCTTTTGACAAAGCTGGGCTGGGCTGGCAGCTCACTCAGGAGGGGCAGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1334785 97 + 1464242 ttttATTCTGCTGACAGTCAAATCTCTGGGGGA--AAAACAACTGAATAACCTTTTGACAAAGCTGGGCTGGGCTGGCAGCTCACTCAGGAGGGGCAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1057040 97 + 81552678 ttttattCTGCTGATGGCTAAATCTCTGGGGGG--AAAACAACTGAATAACCTTTTGACAAAGCTGGGCTGCACTGGCAGCTCACTCAGGAGGGGCAGG i nomLeu3.chr19 I 1 C 0 s rheMac8.chr13 1390681 97 + 108979918 ttttattCTGCTGACAGCCAGATCTCTGGGGGA--AAAACAACCAAACAACGTTTTGACAAAGCCGGGCTGGGCTGGCAGCTCACTCAGGAGGGGCAGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1362965 97 - 111193037 ttttattCTGCTGACAGCCAGATCTCTGGGGGA--AAAACAACCAAACAACGTTTTGCCAAAGCCGGGCTGGGCTGGCAGCTCACTCAGGAGGGGCAGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1391473 97 + 3644372 ttttattttGCTGACAGCCGGATCTCTGGGGGA--AAAACAACCAAACAACATTTTGACAAAGCCGGGCTGGGCTGGCAGCTCACTCAGGAGGGGCAGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1344816 97 - 10304083 ttttattCTGCTGACAGCCAGATCTCTGGGGGA--AAAACAACCGAACAACGTTTTGACAAAGCCGTGCTGGGCTGGCAGCTCACCCAGGAGGGGCAGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1418092 97 - 107702431 ttttcttCTGCTGACAGCCAGATCTCTGGGGGA--AAAATAACTGAACAACCTTTTGACAAAGCCGGGCTGGGATGGCAGCTCACTCAGGAGGGGCAGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 893518 97 - 2200435 TTTTATTCTGCTGACAGCCAGATCTCTGGGGGA--AAAACAACCGAACGACGTTTTGACAAAGCCGGGCTGGGCTGGCAGCTCACCCAGGAGGGGCAGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1326600 97 - 13651311 TTTTATTCTGCTGACAGCCAAATCTCTGGGAGG--AAAACAACCGAACAACTTTTTGACAAAGCCGGGCTGGGCTGGCAGCTCACTCAGGAGGGGCAGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1341797 95 - 108792865 -TTAATTCTTCTGACAGCCAAATCTCGGGAAAA--ATAACAACTGAATAACCTTTTGACAAAGCTGGGCTGGGCTGGCAGCTCACT-AGGAGGGGCAGG i calJac3.chr14 C 0 I 27 s saiBol1.JH378218 1192122 91 - 7082604 ----attCTGCTGACAGCCAAATCTCTGGGAAA----AACAACCAAATAAGGTTTTCACAAAGCTGGGCTGGGCTAGGAGCTCACTCAGGAGGGGCAGG i saiBol1.JH378218 C 0 I 11 s cebCap1.NW_016107827v1 1283948 99 + 1864846 TTTTATTCTGCTGGCAGCCAATTCTCTGGGGAAAAACAGAAACCGAGCAAGTTTTTGACAAAGCTGGGCCGGGCTAGCAGCTCACTCAGGAGGGGCAGG i cebCap1.NW_016107827v1 C 0 I 76 s aotNan1.NW_018513311v1 72786 99 + 287728 TTTTATTCTGCTGACAGCCAAATCTCTGGGGAGAAACAGCAACCGAATAACCTTTTGACGAAGCTGGGCTGGGCTAGCAGCTCACTCAGGAGGGGCAGG i aotNan1.NW_018513311v1 I 292 I 27 e mm10.chr12 89962715 21660 - 120129022 I e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I a score=403412.000000 s hg38.chr2_KI270774v1_alt 72336 50 + 223625 GCCTGGCTCAGGTCAGGTCTTCCTAGGGGAGACTGTGCTGGGATGAGGAG s panTro5.chr2A 1349921 50 + 111504155 GCCTGGATCAGGTCGGGTCTTCCTAGGGGAGACCGTGCTGGGATGAGGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1310083 50 + 114371477 GCCTGGATCAGGTCAGGTCTTCCTAGGGGAGACCGTGCTGGGATGAGGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1334882 50 + 1464242 GCCTGGCTCAGGTTGGGTCTTCCTAGGGGAGACCATGCTGGGATGAGGAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1057137 50 + 81552678 GCCTGGCTCAGGTCGGGTCTTCCTAGTGGAGACCGTGCTGGGATGAGGAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1390778 50 + 108979918 GCCTGGCTCAGGTCAGGTCTTCCTGGGGGAGACCGTGCTGGGATGAGGCG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1363062 50 - 111193037 GCCTGGCTCAGGTCAGGTCTTCCTGGGGGAGACCGTGCTGGGATGAGGCG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1391570 50 + 3644372 GCCTGGCTCAGGTCAGGTCTTCCTGGGGGAGACCGTGCTGGGATGAGGCG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1344913 50 - 10304083 GCCTGGCTCAGGTCTGGTCTTCCTGGGGGAGACCGTGCCGGGATGAGGAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1418189 50 - 107702431 GCCTGGCTCAGGTCGGGTCTTCCTGGGGGAGACCGTGCTGGGATGAGGCG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 893615 50 - 2200435 GCCTGGCTCAGGTCGGGTCTTCCTGGGGGAGACCGTGCCGGGATGAGGAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1326697 50 - 13651311 GCCTGGCTCAGGTCAGGTCTTCCTGGGGGAGACCGTGCTGGGATGAGGAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1341919 50 - 108792865 GCCTGGCTGGGGTCGGGTCTTCCTGGGGGAGGCCACGCTGGGATGGGGAG i calJac3.chr14 I 27 C 0 s saiBol1.JH378218 1192224 42 - 7082604 ----GGCTCGGGTCGGGTCCTCCC--GGGAGGCTACGCC-GGATGGGGA- i saiBol1.JH378218 I 11 C 0 s aotNan1.NW_018513311v1 72912 50 + 287728 GCCTGGCTCGGGTCGGGTCTTCCCGGGGGAGGCTACGCTGGGATGGGGAG i aotNan1.NW_018513311v1 I 27 I 1 e mm10.chr12 89962715 21660 - 120129022 I e cebCap1.NW_016107827v1 1284047 76 + 1864846 I e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I a score=55415.000000 s hg38.chr2_KI270774v1_alt 72386 19 + 223625 ACAGTGGTGCCACAGGG-AA s panTro5.chr2A 1349971 19 + 111504155 ACAGTGGTGCCACAGGG-AG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1310133 19 + 114371477 ACAGTGGTGCCACAGGG-AG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1334932 19 + 1464242 ACAGTGGTGCCACAGGG-AG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1057187 19 + 81552678 ACAGTGGCACCACGGGG-AG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1390828 20 + 108979918 ACAGTAGCACCGTGGGGAAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1363112 20 - 111193037 ACAGTAGCACCGTGGGGAAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1391620 20 + 3644372 ACAGTAGCACCGTGGGGAAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1344963 20 - 10304083 ACAGTGATGCCGCGGGGAAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1418239 20 - 107702431 ACAGTAGCGCCATAGGGAAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 893665 20 - 2200435 ACAGTGACGCTGTGGGGAAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1326747 20 - 13651311 ACAGTGACGCCGCAGGGAAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1341969 1 - 108792865 ----------------G--- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1192266 1 - 7082604 ----------------G--- i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 72962 1 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e cebCap1.NW_016107827v1 1284047 76 + 1864846 I e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I a score=4659191.000000 s hg38.chr2_KI270774v1_alt 72405 496 + 223625 GGGTGCTGAGGGCGTCTCAGAGAGCAGAGGGTGTCTGAGGAGCCCATTGCCAGTTCTTGTCGTGGCCAAGTCTAGTGAGATCTGGTGTCCGGGTTATTGAttttcaggacattcattgaacaaacaaatgtatttgcaacttcatcttcctgggcaagtgtttcccagagagtaaagtcatgttCAgagacaagagttctacttcccaactgtaattggaatctcagtttcacttactcatccatgtgtctgtgc-ttaattccctttcatgtaacatgggaaaaataacactactttcctcatcagattg----ttaattaattaatacaagtagaatatttaaacagtcttggtgggtggaaatgtctgcaaatgttagtccttaCCATGGTGATAATGATTTGCTCAGTAGGGCTTCCT---CCCAAGCCATGGCATGCTCTTACTTGGGCCGTTTCTGTCCCCAGAGCCACTCCTGCCACTGATAATCCATTGTCCTCCC s panTro5.chr2A 1349990 497 + 111504155 GGGCGCTGAGGGCGTCTCAGAGAGCAGAGGGTGTCTGAGGAGCCCATTGCCAGTTCTTGTTGTGGCCAAGTCTAGTGAGATCTGGTGTCTGGGTTATTGAttttcaggacatttgttgaacaaacaaatgtatctgcaacttcatcttcctggccaagtgtttcccagagagtaaagtcatgttCAgagacaagagttctacttcccaactgtaattggaatctcagtttcacttactcatccatgtgtctgtgccttagttccctttcatgtaacatgggaaaaataacactactctcctcatcagattg----ttaattaattaatacaagtagaatatttaaacagtcttggtgggtggaaatgtctgcaaatgttagtccttaCCGCGGTGATAATGATTTGCTCAGTAGGGCTTCCT---CCCAAGCCATGGCATGCTCTTACTTGGGCCATTTCTGTCCCCAGAGCCACTCCTGCCACTGATAATCCATTGTCCTCCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1310152 497 + 114371477 GGGTGCTGAGGGCGTCTCAGAGAGCAGAGGGTGTCTGAGGAGCCCATTGCCAGTTCTTGTTGTGGCCAAGTCTAGTGAGATCTGGTGTCCGGGTTATTGAttttcaggacatttgttgaacaaacaaatgtatctgcaacttcatcttcctggccaagtgtttcccagagagtaaagtcatgttCAGAGACAAGAGTTCTACTTCCCAACTGTAATTGGAATCTCAGTTTCACttactcatccatgtgtctgtgccttagttccctttcatgtaacatgggaaaaataacactactttcctcatcagattg----ttaattaattaatacaagtagaatatttaaacagtcttggtgggtggaaatgtctgcaaatgttagtccttaCCGCGGTGATAATGATTTGCTCAGTAGGGCTTCCT---CCCAAGCCATGGCATGCTCTTACTTGGGCCATTTCTGTCCCCAGAGCCACTCCTGCCACTGATAATCCATTGTCCTCCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1334951 497 + 1464242 GGGCGCTGAGGGCATCTCAGAGAGCAGAGGGTGTCTGAGGAGCCCATTGCCAGTTCTTGTCGTGGCCAAGTCTAGTGAGATCTGGTGTCCGGGTTATTGAttttcaggacattcgttgaacaaacaaatgtatctgcaacttcatcttcctgggcaagtgtttcccagagagtaaagtcatgttCAGAGACAAGAGTTCTACTTCCCAACTGTAATTGGAATCTCAGTTTCACttactcatccatgtgtctgtgccttagttccctttcatgtaacatgggaaaaataacactgctttcctcatcagattg----ttaattaattaatacaagtagaatatttaaacagtcttggtgggtggaaatgtctgcaaatgttagtccttaCCGTGGTGATAATGATTTGCTCAGTATGGCTTCCT---CCCAAGCCATGGCATGCTCTTACTTGGGCCGTTTCTGTCCCCAGAGCCACTCCTGCCACTGATAATCCATTGTCCTCCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1057206 492 + 81552678 GGGTGCTGAGGGTGTCTCAGAGAGCAGAGGGTGTCTGAGGAGCCCATGGGCAGTTCTGGTCCTGGCCAGGGCTAGTGAGATCTGGTGTCTGGGTTATCGAttttcaggacattcattgaatagataaatgtatctgcaacttcatcttcctgggcaagtgtttcctgtagtgtaaagtcaagttCAGAGATGAGAGTTctacttcccaactgtaattggaatctcagtttcacttacccatccatgtgtctgtgcctcagttccctttcatgtaacatgggaaaaataacactactttcctcatcagattg--------ttaattaatacaagtagaatacttaaacagtcttggt-ggtggaaatacctgcaaatgttagtccttaCCGTGGTGATAATGATTTGCTCAGTAAGGCTTCCT---CCCAAGCCATGGCATGCTCTTACTTGGGCTGTTTCTGTCCCCAGAGCCACTCCTGCCACTGCTAATCTATTGTCCTCCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1390848 492 + 108979918 GGGCGCTGAGGGCGTCTCAGAGAGCAGAGGGCGTCTGAGGAGCCCATGGCCAGTTCTGGTCCTGGCCAGGGCTAGTGAGGTCTGGTGTCCGGGTAATTGGttttcaggacattcgtggaacaaacaaatgtgtctgcaacttcatcttcctgggcaagtgtttcccggagagtaaagtcatgttCAGAGATGAGAGTTCTACTTCCCAACTGAAACTGAAATCTCAGTTTCACTTACCCATCCacgtgtctgtgcctcagttccctttcatgtaacgcgggaaaaataacattactttcctcgtcagattg--------ttaattaatacaagtaaaatatttaaacagtcttggtgggtggaaatgtctgcaaatgctagtccttaCCGTGGTGATAATGATTGGCTCAGTAAGGCTTCCT----CCAAGCCATGGCATGCTCTTACTTGGGCCGTTTCTGTCCCCAGAGCCACTCCTGCCACTGCCAATCCATTGTCCTCCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1363132 492 - 111193037 GGGCGCTGAGGGCGTCTCAGAGAGCAGAGGGCGTCTGAGGAGCCCATGGCCAGTTCTGGTCCTGGCCAGGGCTAGTGAGGTCTGGTGTCCGGGTTATTGGttttcaggacattcgtggaacaaacaaatgtgtctgcaacttcatcttcctgggcaagtgtttcccggagagtaaagtcatgttCAGAGATGAGAGTTCTACTTCCCAACTGAAACTGAAATCTCAGTTTCACttactcatccacgtgtctgtgcctcagttccctttcatgtaacgcgggaaaaataacattactttcctcgtcagattg--------ttaattaatacaagtaaaatatttaaacagtcttggtgggtggaaatgtctgcaaatgctagtccttaCCGTGGTGATAATGATTGGCTCAGTAAGGCTTCCT----CCAAGCCATGGCATGCTCTTACTTGGGCCGTTTCTGTCCCCAGAGCCACTCCTGCCACTGCCAATCCATTGTCCTCCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1391640 492 + 3644372 GGGCGCTGAGGGCGTCTCAGAGAGCAGAGGGCGTCTGAGGAGCCCATGGCCAGTTCTGGTCCTGGCCAGGGCTAGTGAGGTCTGGTGTCCAGGTTATTGGttttcaggacattcgtggaacaaacaaatgtgtctgcaacttcatcttcctgggcaagtgtttcccggagagtaaagtcatgttCAGAGATGAGAGTTCTACTTCCCAACTGAAACTGAAATCTCAGTTTCACttactcatccacgtgtctgtgcctcagttccctttcatgtaacgcgggaaaaataacattactttcctcgtcagattg--------ttaattaatacaagtaaaatatttaaacagtcttggtgggtggaaatgtctgcaaatgctagtccttaCCGTGGTGATAATGATTGGCTCAGTAAGGCTTCCT----CCAAGCCATGGCATGCTCTTACTTGGGCCGTTTCTGTCCCCAGAGCCACTCCTGCCACTGCCAATCCATTGTCCTCCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1344983 496 - 10304083 GGGCACTGAGGGCGTCTCAGAGAGCAGAGGGCGTCTGAGGAGCCCATGGCCAGTTCTGGTTCTGGCTAGGGCTAGTGAGGTCTGGTGTCCgggttattggttttcaggacattcgtggaacaaacaaatgtatctgcaacttcatcttcctgggcaagtgtttcccggagagtaaagtcatattCAGAGATGAGAGTTCTACTTCCCAACTGAAACTGAAATCTCAGTTTCACttactcatccacgtgtctgtgcctcagttccctttcatgtaacgcgggaaaaataacattactttcctcgtcagattg----ttaattaattaatacaaataaaatatttaaacagtcttggtgggtggaaatgtctgcaaatgttagtccttaCCATGGTGATAATGATTGGCTCAGTAAGGCTTCCT----CCAAGCCATGGCATGCTCTTACTTGGGCCGTTTCTGTCCCCAGAGCCACTCCTGCCACTGCTAATCCATTGTCCTCCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1418259 496 - 107702431 GGGCACTGAGGGCGTCTCAGAGAGCAGAGGGCGTCTGAGGAGCCCATGGCCAGTTCTGGTCCTGGCCAGGGCTAGTGAAGTCTGGTGTCCgggttattggttttcaggacattcgtggaacaaacaaatgtatctgcaacttcatcttcctgggcaagtgtttcctggagagtaaagtcatattCAGAGATGAGAGTTCTACTTCCCAACTGAAACTGAAATCTCAGTTTCACttactcatccacgtgtctgtgcctcagttccctttcatgtaacgcgggaaaaataacattactttcctcgtcagattg----ttaattaattaatacaagtaaaatatttaaacagtcttggtgggtggaaatgtctgcaaatgctagtccttaCCGTGGTGATAATGATTTGCTCAGTAAGGCTTCCT----CCAAGCCATGGCATGCTCTTACTTGGGCCGTTTCTGTCCCCAGAGCCACTCCTGCCACTGCTAATCCATTGTCCTCCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 893685 496 - 2200435 GGGCACTGAGGGCGTCTCAGAGAGCAGAGGGCGTCTGAGGAGCCCATGGCCAGTTCTGGTCCTGGCCAGGGCTAGTGAGGTCTGGTGTCCgggttattggttttcaggacattcgtgaaacaaacaaatgtatctacaacttcatcttcctgggcaagtgtttcccggagagtaaagtcatattCAGAGATGAGAGTTCTACTTCCCAACTGAAACTGAAATCTCAGTTTCACttactcatccacgtgtctgtgcctcagttccctttcatgtaacgtgggaaaaataacattactttcctcatcagattg----ttaattaattaatacaagtaaaatatttaaacagtcttggtgggtggaaatgtctgcaaatgttagtccttaCCATGGTGATAATGATTGGCTCAGTAAGGCTTCCT----CCAAGCCATGGCATGCTCTTACTTGGGCCGTTTCTGTCCCCAGAGCCACTCCTGCCAGTGCTAATCCATTGTCCTCCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1326767 499 - 13651311 GGGCGCTGAGGGCGTCTCAGAGAGCAGAGGGCGTCTGGGGAGCCCATGGCCAGTTCTGGTCCTGGCCAGGGCTAGTGAGGTCTGGTGTCCgggttattggttttcaggacattcgtgaaacaaac-aatgtatctgcaacttcatcttcctgggcaagtgtttcccagagagtaaagtcatgttCAgagacaagagttctacttcccaactgaaactgaaatctcagtttcacttactcatccatgtgtctgtgcctcagtttcctttcatgtaacacgggaaaaataacactactttcctcatcagattgttagttaattaattaatacaagtaaaatatttaaacagtcttggtgggtggaaatgtctgcaaatgttagtCCTTGCCGTGGTGATAATGATGTGCTCAGTAAGGCTTCCT----CCAAGCCATGGCATGCTCTTACTTGGGCCGTTTCTGTCCCCAGAGCCACTCCTGCCACTGCTAATCCATTGTCCTCCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1341970 489 - 108792865 GGGCGCTGAGGGCATCTC--AGAGCAGAGGGCTTCCCAGGTGCCCGTGACCAGTTCTGGTCCTGGCCAGGGCTAGCGAGGTCTGG-GCCTGGGTTCTCGGttttcaggacattcatggaacaagcaaatgtacctgcatcttcaccttcctgggcaagtgtttcccagagagtcaagtcgtgttCAGAGACAAGAGTTCTAATTCCAAACTGAAACTGAAATCTCAGATCCACttactcatccacgtgtctgtgcctccgtttcctttaatgtaacatgggaaaaataattctaccttcctcatcggactg--------ttaattaatacaagtgaaatattttaacagtcttggttcgtggaactgtctgcaagtgttagtCCTTCCCGTGGTGA-AATGATTTGCTT-GTAAGGCTTCCTCCTCCCAAGCCGTTGCGTG--CTCACTCGGGCCGTTTCTGTCCGCAGAGCCCCACCTGCTGCTGCTCATCCACTGTCCTCCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1192267 491 - 7082604 GGGCGTTGAGGGCATCTCAGAGAGCAGGGGGCTTCCCAGGAGCCCATGGCCAGTTCTGGTCCTGGCCAGGGCTAGTGAGGGCTGG-GCCCGGGTTCTCGGttttcaggacattcatggaacaagcaactgtccctgcaacttcaccttcctgggcaagtgtttcccagagagcaaagtcacgttcggag--aagaGTTCTACTTCCAAACTGAAATTGAAATCTCAGTTTCACttactcatccacgtgtctgtgcctcagtttcctttaatgtaacatgggaaaaataatactactttcctcatcggactg--------ttaattaatacgagtaaaatatcttaacagtcttggcgcgtggaaatgtctgcaaatgttagtCCTTCCTGTGGTGA-GATGATCTGCTTAGTAAGGCTTCCTCCTCCCACGCCACTGCACGCTCTCACTTGGGCCCTTTCTGTCCGCAGAGCCCCACCTGCTGCTGCCCGTCCACTGTCCT-CC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1284123 494 + 1864846 GGGTGCTGAGGGCATCTCAGAGAACAGAGGGCTTCCCAGGAGCCCATGACCAGTTCTGGTCCTGGCCAGGGCTAGTGAGGTCTGG-GCCTGGGTTATCAGttttcaggacattcgtggaacaagcaaacatacctgaaacttccccttcctgggcaagtgtttcccagagagtaaagtcatattcggagacaAGAGTTCTACTTCCAAACTGAAACTGAAACCTCCGTTTCACttactcatccacgtgtctgtgcctcagtttcctttaatgtaacatgggaaaaatactactgctttcctcattggactg--------ttaattaatacaagtaaaatattttaacagtcttggtgtgtggcaatgtctacaaatgttagtCCTTCCCGTGGTGA-GATGATTTGCTTCGTAAGGCTTCCTCCTCCCAAGCCACTGTGCGATCTCACTTGGGCCGTTTCTGTCCACAGAGCCTCACCTGCAGCTGTTCGTCCACTGTCCTCCC i cebCap1.NW_016107827v1 I 76 I 19 s aotNan1.NW_018513311v1 72963 490 + 287728 GGGCGCTGAGGGCATCTCAGAGAGCAGAGGGCTTCCCAGGAGCCCATCACCAGTTCTGGTCCTGGCCAGGGCTAATGAGGTCTGG-GCCTGGGTTCTTGGttttcaggacatcgatggaacaagcaaatgttcctgcaacttcgccttcctggacaagtgtttccaagagagtaaagtcatgttcggagacaAGAGTTCTACTTCCAAACTGAAATTGAAATCTCAGTTTCACttactcatccacgtgtctgtgcctcagtttcctttaatgtaacatgggaaaaataatactactttcctcatcgggctc--------ttaattaatacaagtaaaatattttaacggtcttggtgcgtggaaatgtctgcaaatgttagtccttCCCA-GGTGA-AATGATTTGCTTAGTAAGGCTTCCTCCTCCCAAGCCATTGCGCGCTCTCACTTGGGCCGTTTCTGTCCGCAGAGCCCCACCTGCTGCT---CATCCACTGTCCTCCG i aotNan1.NW_018513311v1 I 1 C 0 e mm10.chr12 89962715 21660 - 120129022 I e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I a score=146194.000000 s hg38.chr2_KI270774v1_alt 72901 26 + 223625 CTCCTGGCATCTGATGTGTGG-CTTTT s panTro5.chr2A 1350487 26 + 111504155 CTCCTGGCATCTGGTGTGTGG-CTTTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1310649 26 + 114371477 CTCCTGGCATCTGGTGTGTGG-CTTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1335448 26 + 1464242 CTCCTGGCATCTGGTGTGTGG-CTTTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1057698 26 + 81552678 CTCCTGGCATCCGGTGTGTGG-CTCTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1391340 26 + 108979918 CTCCTGGCATCCAGTGCGTGG-CTCTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1363624 26 - 111193037 CTCCTGGCATCCAGTGCGTGG-CTCTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1392132 26 + 3644372 CTCCTGGCATCCAGTGCGTGG-CTCTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1345479 26 - 10304083 CTCCTGGCATCCAGTGTGTGG-CTCTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1418755 26 - 107702431 CTCCTGGCATCCAGTGTGTGG-CTCTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 894181 26 - 2200435 CTCCTGGCATCCAGTGTGTGG-CTCTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1327266 26 - 13651311 CTCCTGGCATCCAGTGCGTGG-CTCTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1342459 20 - 108792865 CTCCTGGCGTCCC-TGTGCTG------ i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1192758 20 - 7082604 CTCCTGGGGTCCC-TGGACCG------ i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 73453 21 + 287728 CTCCTGGCGTCCC-TGTGCTGC----- i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e cebCap1.NW_016107827v1 1284617 19 + 1864846 I e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I a score=2471448.000000 s hg38.chr2_KI270774v1_alt 72927 274 + 223625 CCTCCCTTGCTTGTTTCCAGGAATTCTTTCCACCTCAGATTAAAAGCCTTTTCCACAACACAGCCTCCTCTGACCTACCTGAC------TGGGTCAGCTCTCACATTGTAGTATTTTAGAATTGTTTCATCAGTGATGAGCAACCAGGACACTTAGATCAAATTGCTATTTGTCTTTGGTTTGCTGTTTGTCTTTTCCAATAAGCCACCTTTTCTTCCCAGGG------ACCACGCCTGGTTTTTTACTGTGGTG-TCCCCTGGCATACAAGAGGTTAAGTGGTTAT s panTro5.chr2A 1350513 280 + 111504155 CCTCCCTTGCTTGTTTCCAGGAATTCTTCCCACCTCAGATTAAAAGCCTTTTCCACAACACAGCCTCCTCTGACCTACCTGACCCTGACTGGGTCAGCTCTCACATTGTAGTATTTTAGAATTGTTTCATCAGTGATGAGCAACCAGGACACTTAGATCAAATTGCTCTTTGTCTTTGGCTTGCTGTTCGTCTTTTCCAATAAGCCACCTTTTCTTCCCAGGG------ACCACGCCTGGTTTTTTACCGTGGTG-TCCCCTGGCATACAAGAGGTTAAGTGGTTAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1310675 280 + 114371477 CCTCCCTTGCTTGTTTCCAGGAATTCTTCCCACCTCAGATTAAAAGCCTTTTCCACAACACAGCCTCCTCTGACCTACCTGACCCTGACTGGGTCAGCTCTCACATTGTAGTATTTTAGAATTGTTTCATCAGTGATGAGCAACCAGGACACTTAGATCAAATTGCTCTTTGTCTTTGGCTTGCTGTTCGTCTTTTCCAATAAGCCACCTTTTCTTCCCAGGG------ACCACGCCTGGTTTTTTACCGTGGTG-TCCCCTGGCATACAAGAGGTTAAGTGGTTAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1335474 280 + 1464242 CCTCCCTTGCTTGTTTCCAGGAATTCTTCCCACCTCATATTAAAAGCCTTTTCCACAACACAGCCTCCTCTGACCTACCTGACCCTGACTGGGTCAGCTCTCACATTGTAGTATTTTAGAATTGTTTCATCAGTGATGAGCAACCAGGACACTTAGATCAAATTGCTCTTTGTCTTTGGCTTGCTGTTCGTCTTTTCCAATAAGCCACCTTTTCTTCCCAGGG------ACCACGCCTGGTTTTTTACCATGGTG-TCCCCTGGCATACAAGAGGTTAAGTGGTTAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1057724 280 + 81552678 CCTCCCTTGCTTGTTTCCAGGAATCCTTTCCACCTCAGATTAAAAGCCTTTTCCACAACATGGCCTACTCTGACCTACCTGACCCTGATTGGGTCAGCTCTAACATTGTAGTATTTTAGAATTGTTTCCTCAGTGATAAGCAACCAGGACACTTAGATCAAATTGCTGTTTGTCTTTGGCTTGCTGTTCATCTTTTCCAATAAGCCACCTTTTCTTCCCAGGG------ACCATGCCTGGTTTTTTACCATGGTG-TCGCCTGGCATACAAGAGGTTAAGTGGTTAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1391366 279 + 108979918 CCTCCCTTGCTTGTTTCCAGGAATTCTTTCCACCTCAGACTAAAAGCCTTTTACACAACACAGCCTCCTCTGACCTGCCTGACCCTGACTGGGTCAGCTCTGACACTGTGGTATTTTAGAATTGTTTCATCAGTGATAAGCAACCAGGACACTTAGATCAAAttg-tctttgtctttggcttgctgtttgtctttTCCAATAAGCCGCCTTTTCTTCCCAGGG------ACCATGCCTGGTTTTTCACCATGGTG-TCCCCTTGTGTACAAGACGTTAAATGGTTAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1363650 279 - 111193037 CCTCCCTTGCTTGTTTCCAGGAATTCTTTCCACCTCAGACTAAAAGCCTTTTACACAACACAGCCTCCTCTGACCTGCCTGACCCTGACTGGGTCAGCTCTGACACTGTGGTATTTTAGAATTGTTTCATCAGTGATAAGCAACCAGGACACTTAGATCAAAttg-tctttgtctttggcttgctgtttgtctttTCCAATAAGCCGCCTTTTCTTCCCAGGG------ACCATGCCTGGTTTTTCACCATGGTG-TCCCCTTGTGTACAAGACGTTAAATGGTTAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1392158 280 + 3644372 CCTCCCTTGCTTGTTTCCAGGAATTCTTTCCACCTCAGACTAAAAGCCTTTTACACAACACAGCCTCCTCTGACCTGCCTGACCCTGACTGGGTCAGCTCTGACACTGTGGTATTTTAGAATTGTTTCATCAGTGATAAGCAACCAGGACACTTAGATCAAAttg-cctttgtctttggcttgctgtttgtctttTCCAATAAGCCGCCTTTTCTTCCCAGGG------ACCATGCCTGGTTTTTCACCATGGTGATCCCCTTGTGTGCAAGACGTTAAATGGTTAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1345505 279 - 10304083 CCTGCCTTGCTTGTTTCCAGGAATTCTTTCCACCTCAGACTAAAAGCCTTTTACACAACACAGCCTCCTCTGACCTGCCTGACCCTGACTGGGTCAGCTCTGACACTGTGGTATTTTAGAATTGTTTAATCAGTGATAAGCAACCAGGACACTTAGATCAAAttg-tctttgtctttggtttgctgtttgtcattTCCAATAAGCCACCTTTTCTTCCCAGGG------ACCATGCCTGGTTTTTTACCATGGTG-TCCCCTGACATACAAGACATTAAATGGTTAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1418781 279 - 107702431 CCTCCCTTGCTTGTTTCCAGGAATTCTTTCCACCTCAGATTAAAAGCCTTTTACACAACACAGCCTCCTCTGACCTGCCTGACCCTGACTGGGTCAGCTCTGACACTGGGGTATTTTAGAATTGTTTCATCAGTGATAAGCAACCAGGACACTTAGATCAAAttg-tctttgtctttggctggctgttcgtctttTCCAATAAGCCACCTTTTCTTCCCAGGG------ACCATGCCTGGTTTTTCACCATGGTG-TCCCCTGGCGTACAAGACGTTAAATGGTTAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 894207 285 - 2200435 CCTCCCTTGCTTGTTTCCAGGAATTCTTTCCACCTCAGACTAAAAGCCTTTTTCACAACACAGCCTCCTCTGACCTGCCTGACCCTGACTGGGTCAGCTCTGACACTGTGGTATTTTAGAATTGTTTCATCAGTGATAAGCAACCAGGACACTTAGATCAAAttg-tctttgtctttggtttgctgtttgtcattTCCAATAAGCCACCTTTTCTTCCCAGGGAAGAAAACCATGCCTGGTTTTTCACCATGGTG-TCCCCTGGTGTATAAGACGTTAAATGGTTTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1327292 263 - 13651311 CCTCCCTTGCTTGTTTCCGGGAATCCTTTCCACCTCAGATTAAAAGCCTTTTACGCAACACAGCCTCCTCTGACCTACCTGACCCTGACTGGGTCAGCTCTGACACTGTGGTATTTTAGAATTGTTTCATCAGTAATAAACAACCA-GACACTTAGATCAAATTG-CTGTT---------------TTTGTCTTTTCCAATAAGCCACCTTTTATTCCCAGAG------ACCATGCCTGGTTTTTCACCATGGTG-TCCCCTGGGATGCAAGATGTTAAATGGTTAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1342479 277 - 108792865 CCTCCCTCTCTCGGTTCCAGGGATCCTCTCCACGTTGGATG-AAAGCCCTTTCCACACCGTAGCCTCCTCTGACCT-CCCGGCCCTGACTGGGTCAGCTCTTACATTGTAGTATTTTAGGATTGCTTCATCAGTGACGAGCAGCTAGAGCACTCAGACCAATTTGCTATTTGTCTTCGGCTCCCTGTCTGTC-TTTCCAGTAAGCCACCTTTTCTTCTCAGCG------ACCACGCCTGGTCTCTTACCAGGGCG-TCCCCTGGCATACGAGAGGTTAAGTGACTGT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1192778 274 - 7082604 CCCCCCTTTCTCATTTCCAGGAATCCTCTCCACGCTGGGTT-AGAGCCCTTTCCACACCACAGCCTTCTCTGACCT-CCCGACCCTGGCTGGGTCAGCTGTTACACTGCAGTATTTTAGAATTGTTTCACCAGTGACCAGCAGCTGGAGCACTTAGATCAGTTTGCTA-TTGTCTTTGGCTCCCTGTCTGTC---TCCAGTAAGCCACCTGTTCTTCTCAGTG------ACCGCGCCTGGATTTTTACCATGGCG-TCCCCTGGCATACGAGAGGTTAAGTGATTAT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1284636 276 + 1864846 CCTCCCTTTCTCGTTTCCAGGAAACCTTTCCACGTTGGATT-AAAGCTCTTTCCACACCATAGCCTTCTCTGACCT-CCCGACCCTGACTGGGTCAGCCCTTACATTGCAGTATTTTAGGATTGCTTCATCAGAGACAAGCAG-TAGAACACTTAGATCAATTTGCTATTTGTCTTCGGCTCCCTGTCTCTC-TTTCCAGTAAGCCGCCTTTTCTTCTCAGTG------ACCACGCCTGGATTTTTACCATGGCG-TCCCCTGGCATACAAGAGGTTAAGTGATTAC i cebCap1.NW_016107827v1 I 19 C 0 s aotNan1.NW_018513311v1 73474 276 + 287728 -CTCCCTTTCTCGTTTCCAGGAATCCTCTCCACGTTGGATT-AAAGCCCTTTCCACACCGTAGCCTTCTCTGACCT-CCCGACCCTGACTGGGTCAGCTCTTACACTGTAGTATTTTAGAATTGTTTCATCAGTGACGAGCAACTAGAACACTTAGATCAATTTGCTGTTCGTCTTTGGCTCCCCGTCTGTC-TTTCCAGTAAGCCACCTTTTCTTCTCAGCG------ACCACGCCTGGTTTTTTACCATGGCG-TCCCCTGGCATACAAGAGGTTAAGTGATTAT i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I a score=1940605.000000 s hg38.chr2_KI270774v1_alt 73201 372 + 223625 TTCTTTCTTTTCttttttttt--ttttttaatac--tttaagttctagggtacacatgcacaacgtgcaggtttgatacatgggtgtacatgtgccatgttcgtttgccacacctatcaactcgttatttacattaggtatttctcctaatgctatccc-cccccagc-tccccagcctctgacaggccccggtgtgcaatgttccccttcctgtgtccgagtgatctcattgttcatttcctacctgtgagtgagaacatgtggtgtttggttttctgtccttgt-atagtttgctgagaatgatggtttcgagcttcatccatgtccctgcaaaggacatgaactcatccttttttatggctgcatagtattccatg s panTro5.chr2A 1350793 371 + 111504155 TTCTTTCTTtt---ttttttt--ttttttaatac--tttaagttctagggtacacatgcacaacgtgcaggtttgatacatgggtatacatgtgccatgttcgtttgccacatctatcaactcgttatttacattaggtatttctcctaatgctatccctcccccagc-tccccagcccctgacaggccccggtgtgcgatgttccccttcctgtgtctgagtgatctcattgttcatttcctacctgtgagtgagaacatgtggtgtttggttttctgtccttgtgatagtttgctgagaatgatggtttcgagcttcatccatgtccctgcaaaggacatgaactcatccttttttatggctgcatagtattccatg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1310955 370 + 114371477 TTCTTTCTTT----Ctttttt--ttttttaatac--tttaagttctagggtacacatgcacaacgtgcaggtttgatacatgggtatacatgtgccatgttcgtttgccacatctatcaactcgttatttacattaggtatttctcctaatgctatccctcccccagc-tccccagcccctgacaggccccggtgtgcgatgttccccttcctgtgtctgagtgatctcattgttcatttcctacctgtgagtgagaacatgtggtgtttggttttctgtccttgtgatagtttgctgagaatgatggtttcgagcttcatccatgtccctgcaaaggacatgaactcatccttttttatggctgcatagtattccatg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1335754 367 + 1464242 TTCTTTCttt----tcttttt--tttttga--ac--tttaagttctagggtacacatgcacaatgtgcaggtttgatacataggtatacatgtgccatgttcgtttgccatacctatcaactcgttatttacattaggtatttctcctaatgctatccctcccccagc-tccccagcccctgacaggccccggtgtgcgatgttccccttcctgtgttcgagtgatctcattgttcatttcctacctg-gagtgagaacatgtggtgtttggttttctgtccttgtgatagtttgctgagaatgatggtttcgagcttcatccatgtccctgcaaaggacatgaactcatcctttttaatggctgcatagtattccatg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1058004 365 + 81552678 TTCtttcttt-------------tcttttaatactttttaagttctagggtacatgtgcacaacgtgcaggtttgatacataggtatacatgtgccgtgttggtttgctgcacccatcaactcgtaatttacattaggtatatctcctaatgctatccctcccccagg-tccccagcccctgacaggtcccagtgtgtgatgttctccaccctgtatccaagtgatctcattgttcatttcccacctatgagtgagaacatgcagtgtttggttttctgtccttctgatagtttgctgagaatgatggtttccagcttcatccatgtccctgcaaaggccatgaactcatccttttttatggctgcatagtattccgtg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1391645 371 + 108979918 TTCTTTCTTtt---gtttttc--tttttttaaac--tttaagttctagggtacgtgtgcacaacgtgca-gtttgatacacaggtatacatgtgccatgttggtttgctacacccatcaactcgtcatttacattaggtatttctcctaatgctaaccctcccccagtccccccaccccgtgacaggccccggtgtgtgatgttccctgccctgtgtccaagtgatctcattgttcaattcccaactatgagtgagaacatgtggtgtttggtttactgttcctgtgatagtttgctgagaatgatggtttccagcttcatccgtgaccctgcaaaggatatgaactcatccttttttatgactgcatagtattccatg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1363929 371 - 111193037 TTCTTTCTTtt---gtttttc--tttttttaaac--tttaagttctagggtacgtgtgcacaacgtgca-gtttgatacacaggtatacatgtgccatgttggtttgctacacccatcaactcgtcatttacattaggtatttctcctaatgctaaccctcccccagtccccccaccccgtgacaggccccggtgtgtgatgttccctgccctgtgtccaagtgatctcattgttcaattcccacctatgagtgagaacatgtggtgtttggtttactgttcctgtgatagtttgctgagaatgatggtttccagcttcatccgtgaccctgcaaaggatatgaactcatccttttttatgactgcatagtattccatg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1392438 371 + 3644372 TTCTTTCTTtt---gtttttc--tttttttaaac--tttaagttctagggtacatgtgcacaacgtgca-gtttgatacacaggtatacatgtgccatgttggtttgctacacccatcaactcgtcatttacattaggtatttctcctaatgctaatcctcccccagtccccccaccctgtgacaggccccggtgtgtgatgttccctgccctgtgtccaagtgatctcattgttcaattcccacctatgagtgagaacatgtggtgtttggtttactgttcctgtgatagtttgctgagaatgatggtttccagcttcatccgtgaccctgcaaaggatatgaactcatccttttttatgactgcatagtattccatg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1345784 372 - 10304083 TTCTTTCTTTT---Gtttttc-ttttttttaaac--tctaagttctagggtacgtgtgcacaacgtgca-gtttgatacacaggtatacatgtgccatgttggtttgctgcacccatcaactcgtcatttacattaggtatttctcctaatgctaaccctcccccagtccccccaccccgtgacaggccccggtgtgtgatgttccctgccctgtgtccaagtgatctcattgttcaattcccacctatgagtgagaacatgtggtgtttggtttactgttcctgtgatagtttgctgagaatgatggtttccagcttcatccgtgaccctgcaaaggatatgaactcatccttttttatgactgcatagtattccatg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1419060 371 - 107702431 TTCTTTCTTTT---Gtttttc-ttttttttaaac--tttacgttctagggtacgtgtgcacaacgtgca-gtttgatacacaggtatacatgtgccatgttggtttgctgcacccatcaactcgtcatttacattaggtgtttctcctaatgctatccctcccccagt-accccaccccgtgacaggccccagtgtgtgatgttccctgccctgtgtccaagtgatctcattgttcaattcccacctataagtgagaacatgtggtgtttggtttactgttcctgtgatagtttgctgagaatgatggtttccagcttcatccgtgaccctgcaaaggacatgaactcatccttttttatgactgcatagtattccatg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 894492 372 - 2200435 TTCTTTCTTTT---Gtttttctttttttttaaac--tttaagttctaggatacgtgtgcacaatgtgca-gtttgatacacaggtatacatgtgccatgttggtttgctgcacccatcaactcgtcatttacattagatgtttctcctaatgctaaccctccccgagtccccccaccccgtgacaggccccggtgtgtgatgctccctgccctatgtccaagtgatctcattgttcaattcccacctatgagtgagaacatgtggtgtttggtttactgttcctgtgatagtttgctgagaatgatggtttccagctt-atccgtgaccctgcaaaggatatgaactcatccttttttatgactgcatagtattccatg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1327555 371 - 13651311 TTCTTTCTTTT---Gtttttc-ttttttttaaac--tttaagttctagggtacatgtgcacaacgtgca-gtttgatacacaggtatacatgtgccatgttgatttgctgcacccatcaactcgccatttacattaggtatttctcctaatgctaaccctcccccagt-cccccaccctgtgacaggccctggtgtgtgatgttccctgccctgtgtccaagtgatctcattgtttagttcccacctatgagtgagaatatgtggcgtttggtttactgttcctgtgatagtttgctgagaatgatggtttccagcttcatccatgtccctgcaaagtacattaactcatccttttttatggctgcatagtattctatg i colAng1.NW_012118821v1 C 0 I 152 e aotNan1.NW_018513311v1 73750 0 + 287728 C e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1193052 0 - 7082604 C e cebCap1.NW_016107827v1 1284912 0 + 1864846 C e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I e calJac3.chr14 1342756 0 - 108792865 C a score=93876.000000 s hg38.chr2_KI270774v1_alt 73573 35 + 223625 gtgtatatgtgccacattttcttgtggcagaattg s panTro5.chr2A 1351164 35 + 111504155 gtgtatatgtgccacattttcttgtggcacaattg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1311325 35 + 114371477 gtgtatatgtgccacattttcttgtggcacaattg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1336121 35 + 1464242 gtgtatatgtgccacattttcttgtggcacaattg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1058369 23 + 81552678 gtatatatatgccacattttctt------------ i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1392016 23 + 108979918 gtatatatgtgccacatttcctt------------ i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1364300 23 - 111193037 gtatatatgtgccacatttcctt------------ i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1392809 23 + 3644372 gtatatatgtgccacatttcctt------------ i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1346156 23 - 10304083 gtgtatatgtgccacatttcctt------------ i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1419431 23 - 107702431 gtatatatgtgccacatttccct------------ i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 894864 23 - 2200435 gtatatatgtgccacatttcctt------------ i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 73750 0 + 287728 C e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1193052 0 - 7082604 C e cebCap1.NW_016107827v1 1284912 0 + 1864846 C e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I e calJac3.chr14 1342756 0 - 108792865 C e colAng1.NW_012118821v1 1327926 152 - 13651311 I a score=3703026.000000 s hg38.chr2_KI270774v1_alt 73608 695 + 223625 aatccaatctatcattgatggacattcgggttggttccaagtctttgctattgtgaatagtgctgcaatagacatacgtgtgcatgtgtctttacagtagcatgatttataatcctttgggaatatacccagtaatgggattgctgggtcaaatggtaattctatttctagatccttgagggatcgccacactgtcttccacaatggttgaactaatttacactcccattaacagtgtaaaagagttcctatttctccacatcctctccagcat-ctgttgtttcctaactttttaatgat-tgccattcta-actggcatgagatggt-atttcattgtggttttga--tttgcatttctttctc-tgatga-acagtgacaatgagcatcttttca--tgtgtctgttggctgcata-gatgtcttctttt--gagaaagg-tctgttcatatcctttgcctactttttgatggggttgt---------------------ttttttcttgtaaatttgt--ttgcattctttgtagattctggatattagctc--tttgtcagatgggtagatggcaaaaattttctcccattctgtagg-ttgcctgttcactctga-tggtagtt-tcttttgctgtgcagaagctctttagtttaattagatcccatttgtcaattttggc-ttttgttg-ccattgcttttggtgttttagtcatgaagtccttgc-ccatgc s panTro5.chr2A 1351199 695 + 111504155 aatccaatctatcattgatggacattcgggttggttccaagtctttgctattgtgaatagtgctgcagtagacatatgtgtgcatgtttctttacagtagcatgatttataatcctttgggaatatacccagtaatgagattgctgggtcaaatggtaattctatttctagatccttgagggatcgccacactgtcttccacaatggttgaactaatttacactcccactaacagtgtaaaagagttcctatttctccacatcctctccagcat-ctgttgtttcctaactttttaatgat-tgccattcta-actggcatgagatggt-atttcattgtggttttga--tttgcatttctttctc-tgatga-ccagtgacaatgagcatcttttca--tgtgtctgttggctgcata-gatgtcttctttt--gagaaggg-tctgttcatatcctttgcctactttttgatggggttgt---------------------ttttttcttgtaaatttgt--ttgcattctttgtagattctggatattagctc--tttgtcagatgggtagatggcaaaaattttctcccattctgtagg-ttgcctgttcactctga-tggtagtt-tcttttgctgtgcagaagctctttagtttaattagatcccatttgtctattttggc-ttttgttc-ccattgcttttggtgttttagtcatgaagtccttgc-ccatgc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1311360 695 + 114371477 aatccaatctatcatcgatggacattcgggttggttccaagtctttgctattgtgaatagtgctgcagtagacatatgtgtgcatgtttctttacagtagcatgatttataatcctttgggaatatacccagtaatgggattgctgggtcaaatggtaattctatttctagatccttgagggatcgccacactgtcttccacaatggttgaactaatttacactcccactaacagtgtaaaagagttcctatttctccacatcctctccagcat-ctgttgtttcctaactttttaatgat-tgccattcta-actggcatgagatggt-atttcattgtggttttga--tttgcatttctttctc-tgatga-ccagtgacaatgagcatcttttca--tgtgtctgttggctgcata-gatgtcttctttt--gagaaggg-tctgttcatatcctttgcctactttttgatggggttgt---------------------ttttttcttgtaaatttgt--ttgcattctttgtagattctggatattagctc--tttgtcagatgggtagatggcaaaaattttctcccattctgtagg-ttgcctgttcactctga-tggtagtt-tcttttgctgtgcagaagctctttagtttaattagatcccatttgtctattttggc-ttttgttc-ccattgcttttggtgttttagtcatgaagtccttgc-ccatgc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1336156 695 + 1464242 aatccaatctatcattgatggacatttgggttggttccatgtctttgctattgtgaatagtgctgcagtagacatatgtgtgcatgtgtctttacagtagcatgatttataatcctttgggaatatacccagtaatgggattgctgggtcaaatggtaattctatttctagatccttgagggatcgccacactgtcttccacaatggttgaactaatttacactcccactaacagtgtaaaagagttcctatttctccacatcctctccagcat-ctgttgtttcctaactttttaatgat-tgccattcta-actggcatgagatggt-atttcattgtggttttga--tttgcatttctttctc-tgatga-ccagtgacaatgagcatcttttca--tgtgtctgctggctgcata-gatgtcttctttt--gagaaggg-tctgttcatatcctttgcctactttttgatggggttgt---------------------ttttttcttgtaaatttgt--ttgcattctttgtagattctggatattagctc--tttgtcagatgggtagatggcaaaaattttctcccattctgtagg-ttgcctgttcactctga-tggtagtt-tcttttgctgtgcagaagctttttagtttaattagatcccatttgtctattttggc-ttttgttc-ccattgtttttggtgttttagtcatgaagtccttgc-ccatgc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1058392 685 + 81552678 aatccagtctatcattgatggacattcagtttgcttccaagtctttgctattgtgaatagtgttgcaataaacatacatgtgcatgtgtctttttagtagcatgatttataatcctttgggaatatactcagtaatgggattgctggatcaaatggtaattctatttctagatcctcgagggattgccacactgtctcccacaatggttgagctaatttatactcccactaacagtgtaaaagcattcctatttctccacatcctctccagcat-ctgttgtttc----cttttaaatgat-tgccattcta-actggcatgagatggt-atttcattgtggttttga--tttgcatttctttctc-tgatga-ccagtgatgatgagcattttttca--tgtgtctgttggctgcata-gatgtcttctttt--gagaagtg-tctgttcatatcctttgcccacttgttgatggggttgt---------------------ttttttcttgtaaatttgt--ttgcattctttgtagattctggatattagccc--tttgtcagatggatagatcgcaaaaattttctcccattctgtagg-ttgcctgttcactctga-tggtagtt-tcttttgccgtgcagaagctctttagtttaattagatcccatttgtctattctggc-ttttgttg-ccattgcttttggtatttta------aagtccttgc-ccatgc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1392039 700 + 108979918 aatccagtctatcattgatggacatttgggttggttccaagtctttgctattgtgaatagtgctgcaataaacatacgtgtgcttgtgtcttgatagtagcatgatttataatcctttgggtatatacttagtaatgggatctctgagtcaaatggtatttctagttctagatccttgagaaatcgccacactgtcttctacaatggttgaactagtttacactcccaccaacagtgtaaaagcgttcctattcctccacatcctctctagcat-ctgttgtttcctgactttttaatgat-caccattcta-actggcataagatggt-atttcattgtggttttga--tttgca----tttctc-tgatga-ccagtgatgatgagcattttttca--cgtgtctgttggctgcata-gatgtcttctttt--aagaagtg-tctgttcatatcctttgcccactttttgatggggctgt------------ttgttgttgttgtttcttgtaaatttgt--ttaagttctttgtagattctggatattagccc--tttatcagatgggtagattgcaaaaattttctcccattctgcagg-ttgcctgttcactctaa-cggtagtt-tgttttgctgtgcagaagctctttagtttagttagatcccatttgtctgtttttac-ttttgttg-ccattgcttttggggttttagtcataaagtccttgc-ccatgc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1364323 703 - 111193037 aatccagtctatcattgatggacatttgggttggttccaagtctttgctattgtgaatagtgctgcaataaacatacgggtgcttgtgtcttgatagtagcatgatttataatcctttgggtatatacttagtaatgggatctctgagtcaaatggtatttctagttctagatccttgagaaatcgccacactgtcttctacaatggttgaactagtttacactcccaccaacagtgtaaaagcgttcctattcctccacatcctctctagcat-ctgttgtttcctgactttttaatgat-caccattcta-actggcataagatggt-atttcattgtggttttga--tttgca----tttctc-tgatga-ccagtgatgatgagcattttttca--cgtgtctgttggctgcata-gatgtcttctttt--aagaagtg-tctgttcatatcctttgcccactttttgatggggctgt---------ttgttgttgttgttgtttcttataaatttat--ttaagttctttgtagattctggatattagccc--tttatcagatgggtagattgcaaaaattttctcccattctgcagg-ttgcctgttcactctaa-cggtagtt-tgttttgctgtgcagaagctctttagtttagttagatcccatttgtctgtttttac-ttttgttg-ccattgcttttggggttttagtcataaagtccttgc-ccatgc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1392832 721 + 3644372 aatccagtctatcattgatggacatttgggttggttccaagtctttgctattgtgaatagtgctgcaataaacatacgtgtgcttgtgtcttgatagtagcatgatttataatcctttgggtatatacttagtaatgggatctctgagtcaaatggtatttctagttctagatccttgagaaatcgccacactgtcttctacaatggttgaactagtttacactcccaccaacagtgtaaaagcgttcctattcct-cacat-ctctctagcatactgttgtttcctgactttttaatgatccaccattctacactggcataagatggtaatttcattgtggtttttgattttgca----tttctcatgatgacccagtgatgatgagcattttttcactcgtgtctgttggctgcatacgatgtcttcttttccaagaagtgctctgttcatatcctttgccca-tttttgatggggctgt------------ttgttgttgttgtttcttataaatttgttcttaagttctttgtagattctggatattagccccttttacagaatgggtagattgcaaaatttcttcgcgcatttgcaggtttgcctgttcactctaagcggtagttgttttttgctgtgcagaagctctttagtttagttagatcccatttgtctgtttttacggtttgttgcccattgcttttggggttttagtctataagtccttgcgccatgc i macNem1.NW_012011978v1 C 0 I 10 s cerAty1.NW_012000820v1 1346179 704 - 10304083 aatccagtctatcattgatggacatttgggttggttccaagtctttgctattgtgaatagtgctgcaataaacatacatgtgcttgtgtcttgatagtagcatgatttataatcctttgggtatatacttagtaatgggatctctgagtcaaatggtatttctagttctagatccttgagaaattgccacactgtcttctacaatggttgaactagtttacactcccaccaacagtgtaaaagcgttcctattcctccacatcctctctagcat-ctgttgtttcctgactttttaatgat-caccattcta-actggcatgagatggt-atttcattgtggttttga--tttgca----tttctc-tgatga-ccagtgatgatgagcattttttca--catgtctgttggctgcata-gatgtcttttttt--aagaagtg-tctgttcatatcctttgcccactttttgatggggttgt------ttgttgttgttgttgttttttcttgtaaa--tgt--ttaagttctttgtagattctggatattagccc--tttgtcagatgggtagattgcaaaaattttctcccattctgtagg-ttgcctattcactctaa-tggtagtt-tgttttgctgtgcagaagctctttagtttagttagatcccatttgtctattttgac-ttttgttg-ccattgcttttggcgttttagtcataaagtccttgc-ccatgc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1419454 703 - 107702431 aaaccagtctatcattgatggacatttgggttgattccaagtctttgctattgtgaatagtgctgcaataaacatacatgtgcatgtgtcttgatagtagcatgatttataatcctttgggtatatacttagtaatgggatctctgagtcaaatggtatttctagttctagatccttgagaaatcggcacactgtcttctacaatggttgaactag-ttacactcccaccaacagtgtaaaagcgttcctattcctctgcatcctttctagcat-ctgttgtttcctgactttttaatgat-caccattcta-actggcatgagatgtt-atttcattgtggttttga--tttgca----tttctc-tgatga-ccagtgatgatgagcattttttca--cgtgtc--ttggctgcata-gatgtcttctttt--aagaagtg-tctgttcatatcctttgcccactttttgtttgggttgt------ttgttgttgttgttgttttttcttgtaaatttgt--ttaagttctttgtaaattctggatattagccc--tttgtcagatgggtagattgcaaaaattttctcccattctgtaga-ttgcctgttcactctga-tagtagtt-tgttttgctatgcagaagctctttagtttagttagatcccatttgtctattttgac-ttttgttg-ccattgcttttggcgttttagtcataaagtccttgc-ccatgc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 894887 706 - 2200435 aatccagtctatcattgatggatatttgggttgattccaagtctttgctatagtgaatagtgctgcaataaacatacgtgtgcatgtgtcttgatagtagcatgatttataatcctttgggtatatacttagtaatgggatctctgagtcaaatggtatttctagttctagatccttgagaaatcgccacactgtcttctacaatggttgaactagtttacactcccaccaacagtgtaaaagcgttcctactcctccacatcctctctagcat-ctgttgtttcttgactttttaatgat-caccattcta-actggcatgagatggt-atttcattgtggttttga--tttgca----tttctc-tgatga-ccagtgatgatgagcattttttca--catgtctgttggctgcata-gatgtcttttttt--aagaagtg-tctgttcatatcctttgcccactttttgatggggttgt------ttgttgttgttgttgttttttcttgtaaatttgt--ttaagttctttgtagattctggatattagccc--tttgtcagatgggtagattgcaaaaattttctcccattctgtaga-ttgcctgttcactctga-tggtagtt-tgttttgctgtgcagaagctctttagtttagttagatcccatttgtctattttgac-ttttgttg-ccattgcttttggcgttttagtcataaagtccttgc-ccatgc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1328078 712 - 13651311 aatccagtctatcattgatggacatttgggttggttcaaagtctttgctattgtgaatagtgccacaataaacatacatgtgcatgtgtcttgatagtagcatgatttataatcctttgggtatatacccagtaatgggatctctgagtcaaatggtatttctagttctagatccttgagaaatcgccacactgtcttctacaatggttgaactagtttacacttctaccaacactgtaaaagcgttcctattcctccacatcctctccagcat-ctgttgtttcctgactttttaatgat-caccattcta-actggcatgagatggt-atttcattgtggttttga--tttgca----tttctc-tgatga-ccagtgacgatgagcattttttca--cgtgtctgttggctgcata-aatgtcttctttt--aagaagtg-tctgttcatatcctttgcccactttttgatggggttgtttgttgttgttgttgttgttgttgtttcttgtaaatttgt--ttaagttctttgtagattctggatattagccc--tttgtcagatgggtagattgcaaaaattttctcccattctgtagg-ttgcctgttcactctga-tggtagtt-tgttttgccgtgcagaagctctttagtttagttagatcccatttgtctattttgac-ttttgttg-ccattgcttttgacattttagtcataaagtccttgc-ccaggc i colAng1.NW_012118821v1 I 152 C 0 e aotNan1.NW_018513311v1 73750 0 + 287728 C e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1193052 0 - 7082604 C e cebCap1.NW_016107827v1 1284912 0 + 1864846 C e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I e calJac3.chr14 1342756 0 - 108792865 C a score=29425.000000 s hg38.chr2_KI270774v1_alt 74303 7 + 223625 ctatgtc s panTro5.chr2A 1351894 7 + 111504155 ctatgtc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1312055 7 + 114371477 ctatgtc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1336851 7 + 1464242 ctatgtc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1059077 7 + 81552678 ctatgtc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1392739 7 + 108979918 ctgtgcc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1365026 7 - 111193037 ctgtgcc i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1346883 7 - 10304083 ctgtgcc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1420157 7 - 107702431 ctatgcc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 895593 7 - 2200435 ctgtgcc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1328790 7 - 13651311 ctgtgcc i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 73750 0 + 287728 C e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1193052 0 - 7082604 C e cebCap1.NW_016107827v1 1284912 0 + 1864846 C e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I e calJac3.chr14 1342756 0 - 108792865 C e macNem1.NW_012011978v1 1393553 10 + 3644372 I a score=1190599.000000 s hg38.chr2_KI270774v1_alt 74310 224 + 223625 ctgaatggtatcgcctaggttttcttctag--attttctatgg-ttttaggtctcacatttaagtctttaatccatcttgaattaa-ttttgtataaga--tgtaaggaaaggatccagtttcagctttctacatatggctagccagttttcccagcaccatttattaaatagggaatc-atttccccatttctttttgtc-aggtttgtcacagatcagatggttgtggat s panTro5.chr2A 1351901 224 + 111504155 ctgaatggtattgcctaggttttcttcagg--agtttttatgg-ttttaggtctcacatttaagtctttaatccatcttgaattaa-ttttgtataaga--tataaggaaaggatccagtttcagctttctacatatggctagccagttttcccagcatcatttattaaatagggaatc-atttccccatttctttttgtc-aggtttgtcaaagatcagatggttgtggat i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1312062 224 + 114371477 ctgaatggtattgcctaggttttcttcagg--agtttttatgg-ttttaggtctcacatttaagtctttaatccatcttgaattaa-ttttgtataaga--tataaggaaaggatccagtttcagctttctacatatggctagccagttttcccagcatcatttattaaatagggaatc-atttccccatttctttttgtc-aggtttgtcaaagatcagatggttgtggat i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1336858 224 + 1464242 ctgaatggtattgcctaggttttcttctag--agtttttatgg-ttttaggtctcacatttaagtctttaatccatcttgaattaa-ttttgtataaga--tttaaggaaaggatccagtttcagctttctacatatggctagccagttttcccagcaccatttattaaatagggaatc-atttccccatttctttttgtc-aggtttgtcaaagatcagatggttgtggat i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1059084 224 + 81552678 ccgaatggtattgcctaggttttcttctag--gttttttatgg-ttttaggtctaacatgtaaggctttaatccatcttgaattaatttttgtataaga--tgtaaggaagggatccagtttcagctttctacatatggctagccagttttcccagcaccatttattaaatagggaatt-ctttccccatttctttttgtc-aggtttgtcaaagatca-atggttgtggat i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1392746 224 + 108979918 ctgaatgctattgcctaggttttcttctag--agtttttatgg-ttttatgtcttacatgtaagtctttaatccatcttgaattaatttttatataagg--tataaggaagggatccagtttcagctttgtacatatggctagccagttttcccagcactatttattaaatagggaa-c-ctttccccatttctttttgtc-aggtttgtcaaagatcagatggttgtggat i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1365033 224 - 111193037 ctgaatgctattgcctaggttttcttctag--agtttttatgg-ttttatgtcttacatgtaagtctttaatccatcttgaattaatttttatataagg--tataaggaagggatccagtttcagctttgtacatatggctagccagttttcccagcactatttattaaatagggaa-c-ctttccccatttctttttgtc-aggtttgtcaaagatcagatggttgtggat i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1393563 228 + 3644372 ctgaatgctattg-ctaggttttc-tctaggaagtttttatggtttttatgtcttacatgt-agtctttaatccatcttgaattaatttttatataagagttataaggaagggatccagtttcagctttgtacatatggctaggccagttttccagcactatttattaaatagggaa-cattttccccatttctttttgtcaaggtttgtcaaagatcagatggttgtggat i macNem1.NW_012011978v1 I 10 I 24 s cerAty1.NW_012000820v1 1346890 224 - 10304083 ctgaatgctattgcctaggttttcttctag--agtttttatgg-ttttatgtcttacatgtaagtctttaatccatcttgaattaatttttatataagg--tataaggaagggatccagtttcagctttgtacatgtggctagccagttttcccagcactatttattaaatagggaa-c-cttccccgatttctttttgtc-aggtttgtcaaagatcagatggttgtggat i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1420164 224 - 107702431 ctgaatgctattgcctaggttttcttctag--agtttttatgg-ttttatgtcttacatgtaagtctttaatccatcttgaattaatttttatataagg--tataaggaagggatccagtttcagctttgtacatatggctagccagttttcccagcactatttattaaatagggaa-c-ctttccctatttgtttttgtc-aggtttgtcaaagatcagacggttgtggat i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 895600 224 - 2200435 ctgaatgctattgcctaggttttcttctag--agtttttatgg-ttttatgtcttacatgtaagtctttaatccatcttgaattaatttttatataagg--tataaggaagggatccagtttcagctttgtacatatggctagccagttttcccagcactatttattaaatagggaa-c-ctttccccatttgtttttgtc-atgtttgtcaaagatcagacggttgtggat i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1328797 225 - 13651311 ctgaatgctattacctaggttttcttctag--agtttttatag-ttttatgtcttacatttaagtctttaatccatcttgaattaagttttatataagg--tataaggaagggatccagtttcagctttgtacatatggctagccagttttcccagcaccatttattaaatagggaatc-ctttccccatttctttttgtc-aggtttgtcaaagatcagacggttgtggat i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 73750 0 + 287728 C e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1193052 0 - 7082604 C e cebCap1.NW_016107827v1 1284912 0 + 1864846 C e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I e calJac3.chr14 1342756 0 - 108792865 C a score=45302.000000 s hg38.chr2_KI270774v1_alt 74534 10 + 223625 gtgtggtgct s panTro5.chr2A 1352125 10 + 111504155 gtgtggtgct i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1312286 10 + 114371477 gtgtggtgct i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1337082 10 + 1464242 gtgtggtgct i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1059308 10 + 81552678 gtgtggtgtt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1392970 10 + 108979918 gtgttgtgtt i rheMac8.chr13 C 0 I 12 s macFas5.chr13 1365257 10 - 111193037 gtgttgtgtt i macFas5.chr13 C 0 I 12 s cerAty1.NW_012000820v1 1347114 10 - 10304083 gtgtggtgtt i cerAty1.NW_012000820v1 C 0 I 12 s chlSab2.chr14 1420388 10 - 107702431 gtgtggtgtt i chlSab2.chr14 C 0 I 12 s manLeu1.NW_012103754v1 895824 10 - 2200435 gtgtggtgtt i manLeu1.NW_012103754v1 C 0 I 12 s colAng1.NW_012118821v1 1329022 10 - 13651311 gtgtggtgtt i colAng1.NW_012118821v1 C 0 I 12 e aotNan1.NW_018513311v1 73750 0 + 287728 C e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1193052 0 - 7082604 C e cebCap1.NW_016107827v1 1284912 0 + 1864846 C e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I e calJac3.chr14 1342756 0 - 108792865 C e macNem1.NW_012011978v1 1393791 24 + 3644372 I a score=1508210.000000 s hg38.chr2_KI270774v1_alt 74544 282 + 223625 tctattctgttccattggtcta-tatg-tctgttttggtacaagtaccatgctgttttggttactgtagcctcatagtatcgtttgaagtcaggt-agcgtgatgcctccagctttgttctttttgcttaggattgttttggcaatgtgggctcttttttgcttc-catatgaa-ctttaaagtagttttttccaattctgtgaag-aa-agtcattggtagctt--gatggggatggcattgaatctataaattaccttgggcagt-atggccat-tttcacaatattgatt s panTro5.chr2A 1352135 282 + 111504155 tctattctgttccgttggtcta-tatg-tctgttttggtacaagtaccatgctgttttggttactgtagcctcatagtatagtttgaagtcaggt-agcatgatgcctccagctttgttctttttgcttaggattgttttggcaatgcaggctcttttttgcttc-catatgaa-ctttaaagtagttttttccaattctgtgaag-aa-agtcattggttgcgt--gatggggatggcactgaatctataaattaccttggggagt-atggccat-tttcacaatattgatt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1312296 282 + 114371477 tctattctgttccgttggtcta-tatg-tctgttttggtacaagtaccatgctgttttggttactgtagcctcatagtatagtttgaagtcaggt-agcatgatgcctccagctttgttctttttgcttaggattgttttggcaatgcgggctcttttttgcttc-catatgaa-ctttaaagtagttttttccaattctgtgaag-aa-agtcattggttgcgt--gatggggatggcactgaatctataaattaccttggggagt-atggccat-tttcacaatattgatt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1337092 282 + 1464242 tctattctgttccattggtcta-tatg-tctgttttggtacaagtaccatgctgttttggttactgtagcctcatagtatagtttgaagtcaggt-agcgtgatgcctccagctttgttctctttgcttaggattgttttggcagtgcgggctcttttttgcttc-catatgaa-ctttaaagtagttttttccaattctgtgaag-aa-agtcattggttgcgt--gatggggatggcactgaatctataaattaccttggggagt-atggccat-tttcacaatatttatt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1059318 283 + 81552678 tctgttctattccattggtcta-taga-tctgttttggtaccagtaccatgctgttttggttgctgtagccttgtagtgtagtttgaagtcaggt-agcgtgatgcctccagctttgttctttttgcttaggattgacttggcaatgtgggctcttttttggttc-catatgaa-tttgaaagtagttttttccaattctgtgaagaaa-agtcactggtagctt--gatggggatggcattgaatctataaattaccttgggcagt-atggccat-tttcacgatattgatt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1392992 281 + 108979918 cctgttttgttccattggtcta-tata-tctgttttggtacaagtaccatgctgttttggttactgtagccttgaagtatagtttgaagtccggt-agcgtgatgcctccagctttgttcttttggcttaggattgtcttggcaatgtgggctc-tttttggttc-catatgaa-ctttaaagtagttttttccaattctgtgaag-aa-agttattggtagctt--gatggggatggcattgaatctataaattaccttgggcagt-atggccat-tttcacaatactgatt i rheMac8.chr13 I 12 C 0 s macFas5.chr13 1365279 281 - 111193037 cctgttttgttccattggtcta-tata-tctgttttggtacaagtaccatgctgttttggttactgtagccttgaagtatagtttgaagtcaggt-agcgtgatgcctccagctttgttcttttggcttaggattgtcttggcaatgtgggctc-tttttggttc-catatgaa-ctttaaagtagttttttccaattctgtgaag-aa-agttattggtagctt--gatggggatggcattgaatctataaattaccttgggcagt-atggccat-tttcacaatactgatt i macFas5.chr13 I 12 C 0 s macNem1.NW_012011978v1 1393815 286 + 3644372 cctgttttgttccattggtctactatactctgttttggtacaagtaccatgctgttttggtta-tgtagccttg-agtatagtttgaagtcaggtaagcgtga-gcctccagcttttgttcttttgcttaggattggtcttgcaatgtggg-tc-tttttggttcgcatatgaagctttaaagtagttttttccaattctgtgaag-aacagttattggtagccttgaatggggatggcattgaatctataaattacctt-tgcagtaatggccatgtttcacaatactgatt i macNem1.NW_012011978v1 I 24 C 0 s cerAty1.NW_012000820v1 1347136 281 - 10304083 tctgttttgttccattggtcta-tata-tctgttttggtacaagtaccatgctgttttggttactgtagccttgaagtatagtttgaagtcaggt-agcttgatgcctccagctttgttcttttggcttaggattgtcttggcaacgtgggctc-tttttggttc-catatgaa-ctttaaagtagttttttccaattctgtgaag-aa-agttattgatagctt--gatggggatggcattgaatctataaattaccttgggcagt-atggccat-tttcacaatactgatt i cerAty1.NW_012000820v1 I 12 I 1064 s chlSab2.chr14 1420410 281 - 107702431 tctgttctgttccattggtcta-tata-tctgttttggtaccagtaccatgctgttttggttactgtagccttgaagtatagtttgaagtcaggt-agcgtgatgcctccagctttgttcttttggcttaggattgtcttggcaatgtgggctc-tttttggttc-catatgaa-ctttaaagtagttttttccaattctgtaaag-aa-agttattggtagctt--gatggggatggcattgaatctataaattaccttgggcagt-atggccat-tttcacaatgctgatt i chlSab2.chr14 I 12 C 0 s manLeu1.NW_012103754v1 895846 281 - 2200435 tctgttctgttccattggtcta-tata-tctgttttggtacaagtaccatgctgttttggttactgtagccttgaagtatagtttgaagtcaggt-agtgtgatgcctccagctttgttcttttggcttaggattgtcttggcaatgtgggctc-tttttggttc-catatgaa-ctttaaagtagttttttccaattctgtaaag-aa-tgttattggtagctt--gatggggatggcattgaatctataaattaccttgggcagt-atggccat-tttcacaatgctgatt i manLeu1.NW_012103754v1 I 12 C 0 s colAng1.NW_012118821v1 1329044 281 - 13651311 tctgttctgttccattggtcta-tata-tctgttttggtacaagtaccatgctgttttggttactgtagccttgaagtatagtttgaagtcaggt-agcatgatgcctccagctttgttcttttggcttaggattgtcttggcaatgtgggctc-tttctggttc-catatgaa-ctttaaagtagttttttccaattctgtgaag-aa-agttattggtagctt--gatggggatggcattgaatctataaattaccttaggcagt-atggccat-tttcacaatactgatt i colAng1.NW_012118821v1 I 12 C 0 e aotNan1.NW_018513311v1 73750 0 + 287728 C e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1193052 0 - 7082604 C e cebCap1.NW_016107827v1 1284912 0 + 1864846 C e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I e calJac3.chr14 1342756 0 - 108792865 C a score=855393.000000 s hg38.chr2_KI270774v1_alt 74826 211 + 223625 ct-tcttatccatgagca---tggaatgttcttccatttgtttgtgtcctcttttatttctttgagc-agtagtttgtagttctccttgaagaggtccttcacatcccttgt-aagttggattcctaggtattttatt-ctctttgaagcaattgtgaatgggagttcactcatgatttggct-----------------------------------------------------------------------------------------------ctctgtttgtctgttgttgg-tgtacaggaa--tgctt s panTro5.chr2A 1352417 211 + 111504155 ct-tcctatccatgagca---tggaatgttcttccaattgtttgtgtcttcttttatttctttgagc-agtggtttgtagttctccttgaagaggtccttcacatcccttgt-aagttggattcctaggtattttatt-ctctttgaagcaattgtgaatgggagttcactcatgatttggct-----------------------------------------------------------------------------------------------ctctgtttgtctgttgttgg-tgtacaggaa--tgctt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1312578 211 + 114371477 ct-tcctatccatgagca---tggaatgttattccaattgtttgtgtcttcttttatttctttgagc-agtggtttgtagttctccttgaagaggtccttcacatcccttgt-aagttggattcctaggtattttatt-ctctttgaagcaattgtgaatgggagttcactcatgatttggct-----------------------------------------------------------------------------------------------ctctgtttgtctgttgttgg-tgtacaggaa--tgctt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1337374 209 + 1464242 ct-tcctatccatgagca---tggaatgttattccaattgtttgtgtcctc--ttatttctttgagc-agtggtttgtagttctccttgaagaggtccttcacatcccttgt-aagttggattcctaggtattttatt-ctctttgaagcaattgtgaatgggagttcactcatgatttggct-----------------------------------------------------------------------------------------------ctctgtttgtctgttgttgg-tgtacaggaa--tgctt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1059601 207 + 81552678 ct-tcctatccatgagca---tggaatgttcttccatttgtttgtgtcctcttttatttcattgagc-agtggtttgtagttctccttaaagaggtccttcacatcccttgt-aagttggattcctaggtattttatt-ctctttgaagcagttgtgaatgggagatcactcatgatttggct-----------------------------------------------------------------------------------------------ctc----tgtctgttattgg-tgtataggaa--tgctt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1393273 211 + 108979918 tt-tcctatccatgagca---tggaatgattttccatttgtttgtatcctcttttatttaattaagc-agtggtttgtagttctccttgaagaggtccttcacatccctttt-aagttggattcctaggtattttatt-ctctctgtagcaattgttaatgggagttcactgatgatttggtt-----------------------------------------------------------------------------------------------ctctgtttgtctgttattgg-tgtagaggaa--tgctt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1365560 211 - 111193037 tt-tcctatccatgagca---tggaatgattttccatttgtttgtatcctcttttatttaattaagc-agtggtttgtagttctccttgaagaggtccttcacatccctttt-aagttggattcctaggtattttatt-ctctctgtagcaattgtgaatgggagttcactgatgatttggtt-----------------------------------------------------------------------------------------------ctctgtttgtctgttattgg-tgtagaggaa--tgctt i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1394101 217 + 3644372 ttatcctatccatgagccgatcggaatgattttccatttgtttgtatcctcttttatttaattaagcaagtggtttgtagttctcc-tgaagaggtccttcacatcccttttgaagttgga-tcctaggtattttattcctctctgtagcaattgtgaatgggagttcactgatgatttggtt-----------------------------------------------------------------------------------------------ctctgtttgtctgttattggttgtataggaa--tgatt i macNem1.NW_012011978v1 C 0 I 12 s chlSab2.chr14 1420691 213 - 107702431 tt-tcctatccatgagca---tggaataattttccatttgtttgtgtcctcttttatttcattaagc-agtggtttgtagttctccttgaagaggtccttcacatccctttt-aagttggattcctaggtattttatt-ctctctgtagcaattgtgaatgggagttcactcatgatttggtt-----------------------------------------------------------------------------------------------ctctgtttgtctgttattgg-tgtataggaatgtgctt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 896127 211 - 2200435 tt-tcctatccatgagca---tggaatgattttccatttgtttgtgtcctcttttatttcattaagc-agtggtttgtagttctccttgaagaggcccttcacatccctttt-aagttggattcctaggtattttatt-ctctctgtagcaattgtgaatgggagttcactgatgatttggct-----------------------------------------------------------------------------------------------ctctgtttgtctgttattgg-tatagaggaa--tgctt i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1329325 275 - 13651311 tt-tcctatccatgagca---tggaataattttccatttgtttgtgtcctcttttatttcattaagc-agtggtttgtagttctccttgaagaggtccttcacatcccttgt-aagttgggttcctaggtattttatt-ctctctgtagctat-----------------------------tnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctctg--tgtttgctattgg-tatggaggaa--tgctt i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 73750 0 + 287728 C e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1193052 0 - 7082604 C e cebCap1.NW_016107827v1 1284912 0 + 1864846 C e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I e calJac3.chr14 1342756 0 - 108792865 C e cerAty1.NW_012000820v1 1347417 1064 - 10304083 I a score=17005.000000 s hg38.chr2_KI270774v1_alt 75037 6 + 223625 gtgatt s panTro5.chr2A 1352628 6 + 111504155 gtgatt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1312789 6 + 114371477 gcgatt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1337583 6 + 1464242 gcaatt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1059808 6 + 81552678 gtgatt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1393484 6 + 108979918 gttatt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1365771 6 - 111193037 gttatt i macFas5.chr13 C 0 C 0 s chlSab2.chr14 1420904 6 - 107702431 gtgatt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 896338 6 - 2200435 gttatt i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1329600 6 - 13651311 gtggtt i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 73750 0 + 287728 C e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1193052 0 - 7082604 C e cebCap1.NW_016107827v1 1284912 0 + 1864846 C e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I e calJac3.chr14 1342756 0 - 108792865 C e cerAty1.NW_012000820v1 1347417 1064 - 10304083 I e macNem1.NW_012011978v1 1394318 12 + 3644372 I a score=2731522.000000 s hg38.chr2_KI270774v1_alt 75043 617 + 223625 tttgcacattgattttgtatcctgagacttt-gctgaagttgcttatcagctt-aaggagatttg-gggctgag-acgatggggttttttaaatatacaatcatgtcatctgcgaacagggacaatttgacttcctc-ttttcctaattgaataccctttatttctttctcc-t-gcctgattgccctggccagaacttccaacactatgttgaa--taggagtggtgagagagggcatccttgtcttgtgccag-ttttcaaagggaatgcttccaatttttgcccattcagtatgatattg------------tcat-aaatagctcttattattttgagatacattccatcaatacccagtttattgagagtttttagcaggaaaggctgctga-atttcatc-aaaggccttttctgcatctattgagataat-cctgtggtttttgtcattggttatgtttacgtgatggattatgttcattgatttgcatatgttgaacgagccttgcatcccagggatgaagccaacctaatcatggtggataagctttttaatgtgctgctggatttggtttgccagtattttattgaggatttttgcatctatattcatcagggatattggtctaaaattcac-t s panTro5.chr2A 1352634 629 + 111504155 tttgcacattgattttgtatcctgagacttt-actgaagttgcttatcagctt-aaggagatttt-gggctgag-acaatggggttttttaaatattcaatcatgtcatctgcaaacagggacaatttgacttcgtc-ttttcctaattgaatacactttatttctttctct-t-gcctgattgccctggccagaacttccaacactatgttgaa--taggagtggtgagagagggcatccttgtcttgtgccag-tttgcaaagggaatgcttccagtttttgcccattcagtatgatattggctgtaggtttgtcat-aaatagctgttattattttgagatatgttccatcaatacccagtttattcagagtttttagcaagaagggctgctga-atttaatc-aaaggccttttctgcatctattgagataat-cctgtagtttttgtcattggttatgtttacgtgatggattatgttcattgatttgcatatgttgaatgagccttgcatcccagggatgaagccaacctgatcgtggtggataagctttttaatgtgctgctggatttggtttgccagtattttattgaggatttttgcatctatgttcatcagggatattggtctaaaattcac-t i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1312795 629 + 114371477 tttgcacattgattttgtatcctgagacttt-actgaagttgcttatcagctt-aaggagatttt-gggctgag-acaatggggttttttaaatattcaatcatgtcatctgcaaacagggacaatttgacttcctc-ttttcctaattgaatacactttatttctttctct-t-gcctgattgccctggccagaacttccaacactatgttgaa--taggagtggtgagagagggcatccttgtcttgtgccag-tttgcaaagggaatgcttccagtttttgcccattcagtatgatattggctgtaggtttgtcat-aaatagctcttattattttgagatatgttccatcaatacccagtttattcagagtttttagcaagaagggctgctga-atttcatc-aaaggccttttctgcatctattgagataat-cctgtagtttttgtcattggttatgtttacgtgatggattatgttcattgatttgcatatgttgaatgagccttgcatcccagggatgaagccaacctgatcgtggtggataagctttttaatgtgctgctggatttggtttgccagtattttattgaggatttttgcatctatgttcatcagggatattggtctaaaattcac-t i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1337589 626 + 1464242 tttgcacattgattttgtatcctgagacttt-actgaagttgcttatcagctt----gagatttg-gggctgag-acaatagggttttttaaatatacaatcatgtcatctgcaaacagggacaatttgacttcctc-ttttcctaattgaatacactttatttctttctct-tggcctgattgccctggccagaacttccaacactatgttgaa--taggagtggtgagagagggcatccttgtcttgtgccag-tttgcaaagggaatacttccagtttttgcccattcagtatgatactggctgtaggtttgtcat-aaatagctcttattattttgagatatgttccatcaatacccagtttattcagagtttttagcaagaagggctgctga-atttcatc-aaaggccttttctgcatctattgagataat-cctgtggtttttgtcattggttatgtttacgtgatggattatgttcattgatttgcatatgttgaacgagccttgcatcccagggatgaagccaacctgatcgtggtggataagctttttaatgtgctgctggattcagtttgccagtattttattgaggatttttgcatctatgttcatcagggatattggtctaaaattca--t i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1059814 629 + 81552678 tttgcacattgattttgtaccctgagacttt-gctgaagttgcttatcagctt-aaggagatttt-gggctgag-acaatggggttttctagatatacaatcatgtcatctgcaaacaaggacaatttgacttcctc-ttttcctaattgaataccctttatttctttctcc-t-gcctgattgccctggccagaacttccaacactatgttgaa--tacgagtggtgagagagggcatccctgtcttgtgccag-ttttcaaagggaatacttccagtttttgcccattcagtatgatattggctgtgggtttatcat-agatagctcttattattttgagatacatcccatcaatacctaatttattgagagtttttagcatgaagggctgttgg-attttgtc-aaaggccttttctgcatctattgagataat-catgtggtttttgtctttggttctgattatatgctggattacatctattgatttgtgtatattgaaccagccttgcatcccagggatgaagccaacctgatcgtggtggataagctttttgatgtgctgctggatttggtttgccagtattttattgaggatttttgcattgattttcatcagggatattggtctaaaattctc-t i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1393490 628 + 108979918 tttgcacattgattttgtatcctgagacttt-gctgaagttgcttatcagctt-aaggagagttt-gggctgag-atgatggggttttctaaatatacaatcatgtcatctgcaaatagagacaatctgacttcctc-ttttcctaattgaataccatttatttctttctcc-t-gcctgactgccctgtccagaacttccaatactatgctgaa--tagcagtggtgagacaggacatccttgtcttgtgctgg-ttttcaaagggaatgcttccagtttttgaccattcagtatgacattggctgtgggtttgtcat-aaatagctcttattatttcgaggtacatttcatcaatgcccaatttattgagagtttttagcatgaagggctgttga-attttgtc-aaaggccttttctgcatctattgagataat-catgtggtttttgtctttggttatgtttatgtgatggattatgtttcttgatttgtgtatgttgaaccagcctggcatcccagggatgaagccaacctgatcgtggtagataagctttttggtgtgctgctggatctagtttgccagtattttattgaggattttcgcatcaatgttcatcagggatattggtctaaaattcac-- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1365777 628 - 111193037 tttgcacattgattttgtatcctgagacttt-gctgaagttgcttatcagctt-aaggagagttt-gggctgag-atgatggggttttctaaatatacaatcatgtcatctgcaaatagagacaatctgacttcctc-ttttcctaattgaataccatttatttctttctcc-t-gcctgactgccctgtccagaacttccaatactatgctgaa--tagcagtggtgagacaggacatccttgtcttgtgctgg-ttttcaaagggaatgcttccagtttttgaccattcagtatgacattggctgtgggtttgtcat-aaatagctcttattatttcgaggtacatttcatcaatgcccaatttattgagagtttttagcatgaagggctgttga-attttgtc-aaaggccttttctgcatctattgagataat-catgtggtttttgtctttggttatgtttatgtgatggattatgtttcttgatttgtgtatgttgaaccagcctggcatcccagggatgaagccaacctgatcgtggtagataagctttttggtgtgctgctggatctagtttgccagtattttattgaggattttcgcatcaatgttcatcagggatattggtctaaaattcac-- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1394330 630 + 3644372 tttgcacattga-tttgtatcctgagactttggctgaagtctgctatcagcttaaaggagagtttggggctgagaatgaatgggttttctaaata-acaattcattcatc-gcaaatagagacaatctgacttcctctttttcctaattgaataccatttatttctttctcctt-gcctgactgccctgtcagaaacttccaatactatgctgagataagcagtgg-gagaccaggaatccttgtcttgtgctggtttttcaaagggaat-cttccagtttttgaccattcagtatgacattggctgtgggtttgtcataaaatagctcttattaatttcgggtaccattcatcaatgccc-atttattgagag-ttttagcatg-agggctgttgacattttgtcaaaaggccttttctgcatctattgagataatccatgtggttttg---cttggttatgtttatgtgatggattatgtttcttgatttgtgtatgttgaaccagcctggcatcccagggatgaagccaacctgatcgtggtagataagctttttggtgtgctgctggatctagtttgccagtattttattgaggattttcgcatcaatgttcatcagggatattggtctaaaattcac-- i macNem1.NW_012011978v1 I 12 C 0 s chlSab2.chr14 1420910 628 - 107702431 tttgcacattgattttgtatcctgagacttt-gctgaagttgcttatcagctt-aaggagatttt-gggctgag-atgatggggttttctaaatatacaatcatgtcatctgcaaatagagacaatctgacttcctc-ttttcctaattgaataccatttatttctttctcc-t-gcctgactgccctggccagaacttccaatactatgccgaa--tagcagtggtgagagagggcatccttgtcttgtgctgg-ttttcaaagggaatgcttccagtttttgaccattcagtatgacattggctgtgggtttgtcat-aaatagctctcattatttcgaggtacatttcatcaatgcccaatttattgagagtttttagcatgaagggctgttga-attttgtc-aaagtccttttctgcatctattgagataat-cgtgtggtttttgtctttggttatgtttatgtgatggattatgtttattgatttgtgtatgttgaaccagcctggcatcccagggatgaagccaacctgatcgtggtggataagctttttggtgtgctgctggatctggtttgccagtattttattgaggattttcgcatcaatgttcatcagggatattggtctaaaattcac-- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 896344 628 - 2200435 tttgcacattgattttgtatcctgagacttt-gctgaagttgcttatcagctt-aaggagatttg-gggctgag-atgatggggttttctaaatatacaattatgtcatcttcaaatagagacaatctgacctcctc-ttttcctaattgaatactatttatttctttctcc-t-gcctgactgccctggccagaacttccaatactatgccgaa--tagcagtggtgagagagggcatccttgccttgtgctgg-ttttcaaagggaatgcttccagtttttgaccattcagtatgacactggctgtgggtttgtcat-aaatagctcttattatttcgaggtacatttcatcaatgcccaatttattgagagtttttagcatgaagggctgttga-attttgtc-aaaggccttttctgcatctattgagataat-catgtggtttttgtctttggttatgtttatgtgatggtttatgtttattgatttgtgtatgttgaaccagcctggcatcccagggatgaagccaacctgatcgtggtggataagctttttgatgtgctgctggatctggtttgccagtattttattgaggatttgcgcatcaatgttcatcagggatgttggtctaaaattcac-- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1329606 622 - 13651311 tttgcacattgattttgtatcctgagatttt-gctgaagttgcttatcagctt-aaggagatttt-gggctgag-atgatggggttttctaaatatacaatcatgtcatctgcaaatagagccaatctgacttcctc-ttttcctaattgaataccatttatttctttctcc-t-gcctgattgccctggccagaacttccaacactatgttgaa--taggagtggtgagtgagggcatccctgtcttatgccag-ttttcaaagggaatttttccagtttttgcccattcagtatgacattggctgtgggtttgtcat-aaatagctcttattatttcgaggtacatttcatcaatgcccaatttattgagagtttttagcatg-aaggctgttga-attttgtc-aaaggccgtttctgcatctattgagataat-catgtggtttttgtctttggttatgtttatgtgatggattatgtttattgatttgtgtatgttgaaccagccttgcatcccagggatgaagccagcctgatcgtggtggataagctttttggtgtgctgctg------gtttgccagtattttattgaggattttcgcatcagtgttcatcagggatattggtctaaaattcact- i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 73750 0 + 287728 C e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1193052 0 - 7082604 C e cebCap1.NW_016107827v1 1284912 0 + 1864846 C e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I e calJac3.chr14 1342756 0 - 108792865 C e cerAty1.NW_012000820v1 1347417 1064 - 10304083 I a score=2282082.000000 s hg38.chr2_KI270774v1_alt 75660 429 + 223625 ttt-tttgt-tgtgtctctgccagg-ctttgggatcaggatgatgttggcctcataaaatgagttagggaggattccctgtttttctattgattggaatagtgtcagaaggaatggtaccagttcctctttgtacctccggtagaattcggctgtgaatctctctggtcctggac-----tggttggtaggct----attattacctcaatttcagagcctgttattggtctgttcggagactcaacttcttcctggtttagtcttgggagggtgtgtttgtccaggaatttatccttttcttc----tatattttttagtttatttgtgtagaggtgtttatagtagtctctgatggtagtttgtattattgtgggattggtggtgatatcccctttatcattttttattgcatctatttgattcttctctcttttcttcttta s panTro5.chr2A 1353263 428 + 111504155 ttt-tttgt-tgtgtctctgccagg-ctttgggatcaggatgatgttggcctcataaaatgagttagggaggattccctctttttgtattgattggaatagtttcagaaggaatggtaccagttcctctttgtacctcaggtagaattcggctgtgaatccgtctggtcctggac-----tggtgggtaggct----attattacctctgtttcagagcctgttattggtctgttcggagattcaacttcttcctggtttagtcttgggagggtgtgtgtgtccaggaatttatccatttcttc----tatattttttagtttatttgcatagaggtgtttatagtagtctctgatggtagtttgtattattgtgggattggtggtga-atcccctttatcattttttattgcatctatttgattcttctctctcttcttcttta i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1313424 428 + 114371477 ttt-tttgt-tgtgtctctgccagc-ctttggaatcaggatgatgctggcctcataaaatgagttagggaggattccctctttttctattgattggaatagtgtcagaaggaatggtaccagttcctctttgtacctcaggtagaattcggctgtgaatccgtctggtcctggac-----tggtgggtaggct----attattacctctgtttcagagcctgttattggtctgttcggagattcaacttcttcctggtttagtcttgggagggtgtgtgtgtccaggaatttatccatttcttc----tatattttttagtttatttgcatagaggtgtttatagtagtctctgatggtagtttgtattattgtgggattggtggtga-atcccctttatcattttttattgcatctatttgattcttctctcccttcttcttta i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1338215 429 + 1464242 ttt-tttgt-tgtgtctctgccagg-ctttgggatcaggatgatgttggcctcataaaatgagttagggaggattccctctttttctattgattggaatagtgtcagaaggaatggtaccagttcctctttgtacctcaggtagaatttggctgtgaatctgtctggtcctggac-----tggttggtaggct----attattacctcagtttcagagcctgttattggtctgttcggagattcaacttcttcctggtttagtcttgggagggtgtgtgtgtccaggaatttatccatttcttc----tatattttttagtttatttgcatagaggtgtttatagtagtctctgatggtagtttgtattattgtgggattggtggtgatatcccctttatcattttttattgcatctatttgattcttctctcttttcttcttta i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1060443 427 + 81552678 tttgtgtgtgtgtgtctctgccagg-ctttggtatcaggatgatgctggcctcataaaatgagttagggaggattccctctttttctgttgattggaatagtgtcagaaggaatggtaccagttcctccttgtacctctcatagaattcagctgtgaatccatctg----tggac-----tggttggtaggct----attattgcctcaatttcagagcctgttattgatctattaagagattcaacttcttcctggtttagtcttgggagggtgtatgtgttgaggaatttatccattttttc----tatattttttagtttatttgcatagaggtgtttatagtattctctgatggcagtttgtatttctgtgggattggtggtgatatcccctttatcattttttattgcatctatttgattcttctctcttttcttcttta i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1394118 435 + 108979918 ttt-tttgt-tgtgtctctgtcagg-ttttggtatcaggatgatgttggcctcataaaataagttagggaggattcccactttttctgttgattgtaatagtgtcagaaggaatggtaccaagtcctctttgtacctcgggtagaatttggctgtgaatctgtctggtcctggacttttttggttggtaggctattaattattgcttcaatttcagagcctgttattggtctgttgagagattcaacttcttcctggtttagttttgagaggatgtatgtgtccaggaatttatctattctat-------ttttttttagtttatttgcatagaggtgtttataatattctctgatggtagtttgtatttctgtgggattggtggtgatataccctttatcattttttattgcatctatttgattcttctctcttttcttatttg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1366405 435 - 111193037 tgt-tttgt-tgtgtctctgtcagg-ttttggtatcaggatgatgttggcctcataaaataagttagggaggattcccactttttctgttgattgtaatagtgtcagaaggaatggtaccaagtcctctttgtacctcgggtagaatttggctgtgaatctgtctggtcctggacttttttggttggtaggctattaattattgcttcaatttcagagcctgttattggtctgttgagagattcaacttcttcctggtttagttttgagaggatgtatgtgtccaggaatttatctattctat-------ttttttttagtttatttgcatagaggtgtttataatattctctgatggtagtttgtatttctgtgggattggtggtgatatcccctttatcattttttattgcatctatttgattcttctctcttttcttatttg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1394960 435 + 3644372 ttt-tttgt-tgtgtctctgtcagg-ttttggtatcaggatgatgttggcctcataaaataagttagggaggattcccactttttctgttgattgtaatagtgtcagaaggaatggtaccaagtcctctttgtacctcgggtagaatttggctgtgaatctgtctggtcctggacttttttggttggtaggctattaattattgcttcaatttcagagcctgttattggtctgttgagagattcaacttcttcctggtttagttttgagaggatgtatgtgtccaggaatttatctattctat-------ttttttttagtttatttgcatagaggtgtttataatattctctgatggtagtttgtatttctgtgggattggtggtgatatcccctttatcattttttattgcatctatttgattcttttctcttttcttatttg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1348481 439 - 10304083 ttt-tttgt-tgtgtcttctgcaggcctttggtatcaggattatgttggcctcataaaataagttagggaggattccctctttttctgttgattgtaatagtgtcagaaggaatggtaccaggtcctctttgtacctcgggtagaatttggctgtgaatctgtctggtcctggactttcttggttggtaggctattaattattgcttcaatttcagagcctgtttttggtctgttgagagattcaacttcttcctggtttagttttgagaggatgtatgtgtccaggaatttatctatttcttc----tattttttttagtttatttgcatagaggtgtttatagtattctctgatagtagtttgtatttctatgggattggtggtgatatcccctttatcattttttattgcatcgatttgattcttctctcttttcttatttg i cerAty1.NW_012000820v1 I 1064 C 0 s chlSab2.chr14 1421538 432 - 107702431 -tt-tttgt-tgtgtctctgccagg-ctttggtatcaggattatgttggcctcataaaataagttagggaggattccctctttttctgttgattgtaatggtgtcagaaggaatggtaccaagtcctctttgtacctcgggtagaattcggctgtgaatccatctggtcctggacttttttggttggtaggctactaattattgcttcaatttcagagcctgttattggtctgttcagagattcaacttcttcctggtttag-tttgggaggatgtatgtgtccaggaatttatctatttcttc----tatattttctagtttatttgcatagaggtgtttatagtattttctgatggtagtttgtatttctgtgggattgatggtgatatcccctttatcattttttattgcatctatttgattcttctctctttt----cttg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 896972 437 - 2200435 ttt-tttgt-tgtgtctctgccagg-ctttggtatcaggattatgttggcctcataaaataagttagggaggattccctctttttctgttgattgtaatagtgtcagaagaaatggtaccaggtcctctttgtacctcgggtagaattcggctgtgaatccgtctggtcctggacttttttggttggtaggctattaattattgcttcaatttcagagcctgttattggtctgttaagagattcaacttcttcctggtttag-tttgggaggatgtatgtgtccaggaatttatctatttcttc----tatattttttagtttatttgcatagaggtgtttatagtattttctgatggtagtttgtatttctgtgggattgatggtgatatcccctttatcattttttattgcatctgtttgattcttctgtcttttcttacttg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1330228 441 - 13651311 -tt-tttgt-tgtgtctctgccggg-ctttgttatcaggatgatgttggcttcataaaataagttagggaggattccctctttttctgttgactggaatagtgtcagaaggaatggtaccaggtcctctttgtaccttgggtagaattcggctgtgaatccatctagtcctggacttttttggttggtaggctattaattattgcttcaatttcagagcctgttattggtctgttgagagattcaacttcttcctggtttagttttgagaggatgtatgtgtccaggaatttatctatttcttcttttttttttttttagtttatttgcatagaggtgtttatagtattctctaatggtagtttgtatttctgtgggattggtggtgatatcccctttatcattttttattgcatctatttgattctcctctcttttcttatttt i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 73750 0 + 287728 C e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1193052 0 - 7082604 C e cebCap1.NW_016107827v1 1284912 0 + 1864846 C e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I e calJac3.chr14 1342756 0 - 108792865 C a score=2571647.000000 s hg38.chr2_KI270774v1_alt 76089 282 + 223625 ttCTTAAACAGATACTTAGGATGAAAATGAAATATGTGTAATGTTTTACATTCAT--GAGTGTGTAAAGAGTCATATAGACTCTTTGTCATCACTGGCTTTACTTTAAGGCAAAGGTGACTGACtcaggtcattctcataatggtataaagaaatacctgaggcaaggtaacttatgaagaaaaagggtttcactgacttgtggttctgtaagctgtagaggaaacagcagcttctgcttct-ggggaggcctcaggaagcttccaattgtagcggaaggcagag- s panTro5.chr2A 1353691 282 + 111504155 ttCTTAAACAGATACTTAGGATGAAAATGAAATATGTGTAATGTTTTACATTCAT--GAGTGTGTAAAGAGTCATATAGACCCTTTGTCATCACTGGCTTTACTTTAAGGCAAAGGTGACTGACtcaggtcattctcataatgatataaagaaatacctgaggccgggtaacttataaagaaaaggggtttcactgactcatggttctgtaagctgtagaggaaacagcagcttctgcctct-ggggaggcctcaggaagcttccaattgtagcggaaggcagag- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1313852 282 + 114371477 ttCTTAAACAGATACTTAGGATGAAAATGAAATATGTGTAATGTTTTACATTCAT--GAGTGTGTAAAGAGTCATATAGACCCTTTGTCATCACTGGCTTTACTTTAAGGCAAAGGTGACTGACtcaggtcattctcataatggtataaagaaatacctgaggccgggtaacttataaagaaaaggggtttcactgactcgtggttctgtaagctgtagaggaaacagcagcttctgcctct-ggggaggcctcaggaagcttccaattgtagcggaaggcagag- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1338644 282 + 1464242 ttCTTAAACAGATACTTAGGATGAAAATGAAATATGTGTAATGTTTTACATTCAT--GAGTGTGTAAAGAGTCATATAGACTCTTTGTCATCACTGGCTTTACTTTAAGGCAAAGGTGACTGACtcaggtcattctcataatggtataaagaaatacctgaggcagggtaacttataaagaaaaggggtttcactgactcgtggttctgtaagctgtagaggaaacagcagcttctgcttct-ggggaggcctcacgaagcttccaattgtagtggaaggcagag- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1060870 282 + 81552678 ttCTTAAACAGATACTTAGGATAAAAACAAAATATGTGTAATGTTTTACATTCAC--GAGTGTGTAAAGAGTCATATACACCCTTTGTCGTCACTGGCTTTATTTTAAGGCAAAGGTGACTGACttaggtcattctcacactgctataaagaaatacctgagacagggtaacttataaagaaaagtggtttcactggcttgtggttctgtaagctgtagaggaaacagcagcttctgcttct-ggggaggcctcaggaagcttccaattgtagcggaaggcagag- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1394553 280 + 108979918 ttCTTAAACAGATACTGAGGATGAAAACGAAATATGTGTAATATTTTACATTCAT--GAGTGTGT--AGAGTCATATGGACCCTTTGTCATCACTGGCTTTACTTTAAGGCAAAGGTGACTGACttaggtcattctcacactgctataaagaaatatccgagacagggtaacttataaagaaaaggggtttcactggctcgtgttcctgcaggttgtagaggaaacagcagcttctgcttct-ggggaggcctcaggaagcttccaattgtagcagaaggcagag- i rheMac8.chr13 C 0 I 1 s macFas5.chr13 1366840 280 - 111193037 ttCTTAAACAGATACTGAGGATGAAAACGAAATATGTGTAATATTTTACATTCAT--GAGTGTGT--AGAGTCATATGGACCCTTTGTCATCACTGGCTTTACTTTAAGGCAAAGGTGACTGACttaggtcattctcacactgctataaagaaatatccgagacagggtaacttataaagaaaaggggtttcactggctcgtgttcctgcaggttgtagaggaaacagcagcttctgcttct-ggggaggcctcaggaagcttccaattgtagcggaaggcagag- i macFas5.chr13 C 0 I 1 s macNem1.NW_012011978v1 1395395 280 + 3644372 ttCTTAAACAGATACTGAGGATGAAAACGAAATATGTGTAACATTTTACATTCAT--GAGTGTGT--AGAGTCATATGGACCCTTTGTCATCACTGGCTTTACTTTAAGGCAAAGGTGACTGACttaggtcattctcacactgctataaagaaatatccgagacagggtaacttataaagaaaaggggtttcactggctcgtgtttctgcaggttgtagaggaaacagcagcttctgcttct-ggggaggcctcaggaagcttccaattgtagcggaaggcagag- i macNem1.NW_012011978v1 C 0 I 1 s cerAty1.NW_012000820v1 1348920 280 - 10304083 ttCTTAAACAGATACTGAGGATGAAAACGAAATATGTGTAATATTTTACATTCAC--GAGTGTGT--AGAGTCGTATGGACCCTTTGTCATCACTGGCTTTACTTTAAGGCAAAGGTGACTGACttaagtcattgtcacactgctataaagaaatatccgagacagggtaacttataaagaaaaggggtttcactggctcgtgtttctgcaggttgtagaggaaacagcagcttctgcttct-ggggaggcctcaggaagcttccaattgtagcagaaggcagag- i cerAty1.NW_012000820v1 C 0 I 1 s chlSab2.chr14 1421970 280 - 107702431 ttCTTAAACAGATACTGAGGATGAAAACGAAATATGTGTAATATTTTACATTCAT--GAGTGTGT--AGAGTCGTATGGACCCTTTGTCATCACTGGCTTTACTTTAAGGCAAAGGTGACTGACttaggtcattgtcacactgctataaagaaatatccgagacagggtaacttataaagaaaaggggtttcactggctcgtgtttctgcaggttgtagaggaaacagcagtttctacttct-ggggaggcctcaggaagctttcaattgtagcagaaggcagag- i chlSab2.chr14 C 0 I 647 s manLeu1.NW_012103754v1 897409 279 - 2200435 ttCTTAAACAGAT-CTGAGGATGAAAACGAAATATGTCTAATATTTTACATTCAT--GAGTGTGT--AGAGTCGTATGGACCCTTTGTCATGACTGGCTTTACTTTAAGGCAAAGGTGACTGACttaggtcattgtcacactgctataaagaaatatccgagacagggtaacttataaagaaaaggggtttcactggctcatgtttctgcaggttgtagaggaaacagcagcttctgcttct-ggggaggcctcaggaagcttccaattgtagcagaaggcagag- i manLeu1.NW_012103754v1 C 0 I 1 s colAng1.NW_012118821v1 1330669 280 - 13651311 ttCTTAAACAGATACTGAGGATAAAAATGAAATATGTGTAATATTTTACATTCAT--GAGCGTGT--AGAGTCGTATGGACCCTTTGTCATCACTGGCTTTACTTTAAGGCAAAGGTGACTGACttaggtcattctcacactgctataaagaaatatccgagacagggtaacttataaagaaaaggggtttcactggctcgtgtttctgcaggttgtagaggaaacagcagcttctgcttct-ggggaggcctcaggaagcttccaattgtagcagaagacagag- i colAng1.NW_012118821v1 C 0 I 1 s calJac3.chr14 1342756 273 - 108792865 TTCTTAAATAGATACTTAGGATGAAAAC-AAATAGGAGTAATGTTTTACATTTACCAGAGTGCGTACAGAGGGGTATAGA-CCTTTATCATCACTGGCTTTGCTTCCAGGCGGAGGTGACTGACCTAAGTcattctcacactgctgtaaagaaacaccagagactgggtaacttacaaaggaaaggggcggaactggctcg----tctgcaggctgtagaggaaac-acagcttctgctcct-gggggggcctcaggaagcttccaatcgtagtggaaggc----- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1193052 285 - 7082604 TTCTTAAATAGATACTTAGGATGAAAACAAAATAAGAGTACTGTTTCACGTTGACGGGAGTGTGTACAAAGTGGTATAGAGCCTTTATCATCACTGGCTTTGCTTCCAGGCAAAGGTGACTGACttaagttgtcctcacactggtataaagaaacaccagagactgggtgacttttaaagaaaaggggttgaactggctcatggttctgcaggctgttggggacatggcagcttctgctcct-ggggggacctcaggaagcttccaatcatagtggaaggcagagg i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1284912 285 + 1864846 TTCTTAAATAGATACTTAGGATGAAAACAAAATAAAAGTAATGTTTTACGTTTACAAGAGTGTGTACAGAGCGGTATAGACACTTTATCATCACTGGCTTTGCTTCCAGGCAAAGGTGACTGACttaagtcattctcacactgctataaagaaacaccagagactgggtaacttacaaagaaaagggcttgaactggctcgtggttctgcaggctgtaggggaaacggcagcttctgcccct-gggggggcctcaggaagcttccaatcgtagtggaaggcagagg i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 73750 286 + 287728 TTCTTAAATAGATACTTAGGATGAAAACAAAATAAGAGTGATGTTTTACATTTGCAAGAGTGTGTACAGAGTGGTATAGACCCTTTGTCCTCGCTGGCTTTGCTTCCAGGCAGAGGTGACCGACttaagtcattctcacactgctataaagaaacaccagagactgggtaccttacaaagaaaaggggttgaactggcccgtggttctgcaggctgtagaggaaacggcagcttctgctcctggggggggcctcaggaagcctccaatcctagtggaaggcagagg i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I a score=772073.000000 s hg38.chr2_KI270774v1_alt 76371 110 + 223625 gg-agcgaggcgtctcacaaggtgggagcaggaggaagagaggagagga----gagggaggttctgcacacttcaaccaccagatctcacaagaactcattcactat-------------gaggagga s panTro5.chr2A 1353973 110 + 111504155 gggagcgaggtgtctcacaaggcaggagcaggaggaagagag-agagga----gagggaggttctgcacgcttcaaccaccagatctcacaagaactcactcactat-------------gagaagga i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1314134 110 + 114371477 gggagcgaggtgtctcacaaggcaggagcaggaggaagagag-agagga----gagggaggttctgcacgcttcaaccaccagatctcacaagaactcactcactat-------------gaggagga i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1338926 110 + 1464242 gg-agcgaggcgtgtcacaaggcgggagcaggaggaagagaggagagga----gagggaggttctgcacgcttcaaccaccagatctcacaagaattcactcactat-------------gagaagga i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1061152 110 + 81552678 gggagtgaggcatctcacaaggcgggagcaggaaggagagag-agagga----gagggaggttctgcatgcttcaaccaccagatctcacaagaactcactcactat-------------gaggagga i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1394834 109 + 108979918 -ggagcaaggcgtctcacaaggcaggagccggaggaagagag-agagga----gagggaggttttgcacacttcaaccaccagatctcacaagaactcactcactgc-------------gaggagga i rheMac8.chr13 I 1 I 14 s macFas5.chr13 1367121 109 - 111193037 -ggagcaaggcgtctcacaaggcaggagcaggaggaagagag-agagga----gagggaggttttgcacacttcaaccaccagatctcacaagaactcactcactgc-------------gaggagga i macFas5.chr13 I 1 I 14 s macNem1.NW_012011978v1 1395676 109 + 3644372 -ggagcaaggcgtctcacgaggcaggagcaggaggaagagag-agagga----gagggaggttttgcacacttcaaccaccagatctcacaagaactcactcactgt-------------gaggagga i macNem1.NW_012011978v1 I 1 I 14 s cerAty1.NW_012000820v1 1349201 109 - 10304083 -ggagcaaggcgtctcacaaggcaggagcaggaggaagagag-agagga----gagggaggttttgcacacttcaaccaccagatctcacaagaacgaactcactgt-------------gaggagga i cerAty1.NW_012000820v1 I 1 I 14 s manLeu1.NW_012103754v1 897689 109 - 2200435 -gaagcaaggcgtctcacaaggcaggagcaggaggaagagag-agagga----gagggaggttttgcacacttcaaccaccagatctcacaagaactcactcactgt-------------gaggagga i manLeu1.NW_012103754v1 I 1 I 14 s colAng1.NW_012118821v1 1330950 109 - 13651311 -ggagcaaggcgtctcaccaggaaggagcagggggaagagag-agagga----gagggagattctgcacacttcaaccaccagatctcacaagaactcactcactgt-------------gaggagga i colAng1.NW_012118821v1 I 1 I 189 s calJac3.chr14 1343029 115 - 108792865 -----------gtcactctcggcaggagcaggaggaagagag-agaggaggggaggggaggttctgcacacttaaaccagcagctctcacaagaactcactcactaccgaggacagcagcgagaggg- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1193337 118 - 7082604 -ggagccaggtgtcatgcagggcaggagcagga-gaagacag-cgagga------gggaggttccgcacactcaaaccagcagctctcacaagaactcactcactatcacggacagcagcgagaggg- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1285197 120 + 1864846 -ggagccaggtgtcacgcccggcaggagcgggaggcagagag-agagga-----ggggaggttccgcacacttaaaccagaagctcccacaagaactcacgcactatcgcagacagcagcgagaggg- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 74036 120 + 287728 -ggagccaggtgtcacgcaaggcaggagcaggaggaagagag-agagga-----ggggaggttctgcacacttaaaccagcagctgtcacaggatctcactcactacggagcacagcagcgagaggg- i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I e chlSab2.chr14 1422250 647 - 107702431 I a score=277062.000000 s hg38.chr2_KI270774v1_alt 76481 54 + 223625 tgctgctaacccattcgtgagaaatcgcccatg-----------acccagtcacctcccaccagg s panTro5.chr2A 1354083 54 + 111504155 tgctgcgaacccattcgtgagaaatcacccatg-----------acccagtcacctcccaccagg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1314244 54 + 114371477 tgctgctaacccattcgtgagaaatcacccatg-----------acccagtcacctcccaccagg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1339036 45 + 1464242 tgctgctaacccattcgtgagaagtcacccatg-----------acccagtcacct--------- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1061262 54 + 81552678 tgctgctaacccattcgtgagaaatcacccatg-----------acccagtcacctcccacctgg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1394957 56 + 108979918 tgctgctaacccattcgtgagaattctcccatgcgtgagaaatcacgcagtcacct--------- i rheMac8.chr13 I 14 C 0 s macFas5.chr13 1367244 56 - 111193037 tgctgctaacccattcgtgagaattctcccatgcgtgagaaatcacgcagtcacct--------- i macFas5.chr13 I 14 C 0 s macNem1.NW_012011978v1 1395799 56 + 3644372 tgctgctaacccattcgtgagaattctcccatgcgtgagaaatcacgcagtcacct--------- i macNem1.NW_012011978v1 I 14 C 0 s cerAty1.NW_012000820v1 1349324 56 - 10304083 tgctgctaacccattcgtgagaattctcccatgcgtgaggaatcacgcagtcacct--------- i cerAty1.NW_012000820v1 I 14 C 0 s manLeu1.NW_012103754v1 897812 65 - 2200435 tgctgctaacccattcgtgagaattctcccatgcgtgaggaatcacgcagtcacctcccaccagg i manLeu1.NW_012103754v1 I 14 C 0 s calJac3.chr14 1343144 45 - 108792865 tgctgctgacccattcctgagaaatcacccgtg-----------acccagtcccct--------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1193455 45 - 7082604 tgctgctgacccgttcatgagaagtcacgcgtg-----------acccgctcacct--------- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1285317 45 + 1864846 tgcggctaacccgttcatgagaaatcacccgtg-----------acccagtcacct--------- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 74156 45 + 287728 tgctgctgacccattcatgagaaaccacccgcg-----------acccagtcacct--------- i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I e colAng1.NW_012118821v1 1331059 189 - 13651311 I e chlSab2.chr14 1422250 647 - 107702431 I a score=35681.000000 s hg38.chr2_KI270774v1_alt 76535 5 + 223625 cccac s panTro5.chr2A 1354137 5 + 111504155 cccac i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1314298 5 + 114371477 cccac i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1339081 5 + 1464242 cccac i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1061316 5 + 81552678 cccac i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1395013 5 + 108979918 cccac i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1367300 5 - 111193037 cccac i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1395855 5 + 3644372 cccac i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1349380 5 - 10304083 cccac i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1422897 5 - 107702431 cccac i chlSab2.chr14 I 647 C 0 s calJac3.chr14 1343189 5 - 108792865 cccag i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1193500 5 - 7082604 cccag i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1285362 5 + 1864846 cccag i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 74201 5 + 287728 cccag i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I e colAng1.NW_012118821v1 1331059 189 - 13651311 I e manLeu1.NW_012103754v1 897877 0 - 2200435 C a score=1102108.000000 s hg38.chr2_KI270774v1_alt 76540 121 + 223625 caggcccctcttccaaccct-ggggattgtaattcaacgtgaggtttgggtggggacacagattcaagccatatcaGTGACTTTGCAGAGTTAAGATCAGGTCCACACAGCACCTGGGTGGA s panTro5.chr2A 1354142 121 + 111504155 caggcccctcttccaaccct-ggggattgtaattcaacgtgaggtttgggtggggacacggattcaaaccatatcaGTGACTTTGCAGAGTTAAGATCAGGTCCACACAGCACCTGGGTGGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1314303 121 + 114371477 caggcccctcttccaaccct-gggaattgtaattcaacgtgaggtttgggtggggacacggattcaaaccatatcaGTGACTTTGCAGAGTTAAGATCAGGTCCACACAGCACCTGGGTGGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1339086 121 + 1464242 caggcccctcttccaaccct-ggggattgtaattcaacgtgaggtttgggtggggacatggattcaaaccatatcaGTGACTTTGCAGAGTTAACATCAGGTCCACACAGCACCTGGGTGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1061321 122 + 81552678 taggcccctcttccaaccccgggggattgtaattcaacgtgaggtttgggtggggacatggattcaaaccatatcaGTGACTTTGCAGAGTTAAGATCAGGTCCATACAGGACCTGGGTGGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1395018 121 + 108979918 gaggcccctcttccaaccct-gaggactgtcattcaacatgaggtttgggtggggtcacggattcaaaccgtatcaGTGACTTTGCAGAGTTAAGATCAGGTCCACATAGGACCTGGGTGGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1367305 121 - 111193037 gaggcccctcttccaaccct-gaggactgtcattcaacatgaggtttgggtggggtcacggattcaaaccgtatcaGTGACTTTGCAGAGTTAAGATCAGGTCCACATAGGACCTGGGTGGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1395860 121 + 3644372 gaggcccctcttccaaccct-gaggactgtcattcaacatgaggtttgggtggggtcacggattcaaaccgtatcaGTGACTTTGCAGAGTTAAGATCAGGTCCACATAGGACCTGGGTGGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1349385 121 - 10304083 caggcccctcttacaaccct-ggggactgtcattcaacatgaggcttgggcggggtcacggattcaaaccgtaccaGTGACTTTGCAGAGTTAAAATCAGGTCCACATAGGACCTGGGTGGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1422902 121 - 107702431 caggcccctcttccaaccct-ggggactgtcattcaacgagaggtttgggcggggtcacggattcaaaccatatcaGTGGCTTTGCAGAGTTAAAATCAGGTCCACATAGGACCTGGGTGGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 897877 117 - 2200435 ----cccctcttccaaccct-ggggactgtcattcaacatgaggtttgggcggggtcacggattcaaaccatgtcaGTGACTTTGCAGAGTTAAGATCAGGTCCACATAGGACCTGGGTGGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1331248 120 - 13651311 caggctcctcttccaaccct-g-ggactgtcattcaacatgaggtttgggcagggccacggattcaaaccatattaGTGACTTTGCAGAGTTAAGATCAGGTCCACATAGGACCTGGGTAGA i colAng1.NW_012118821v1 I 189 C 0 s calJac3.chr14 1343194 121 - 108792865 caggcccttctcccgacact-ggggattataattcaccgtgaggtctgggcggggacatggattcaaactatatcaGTGACTTTTTGGATTTAAGATCAGCTCCACGCAGGACCTGGGTGGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1193505 121 - 7082604 caggcccttctcgcgacacc-ggggattgtaattcaacgtgaggtctgggcggggacatagattcaaacgatatcGGTGACTTTTCGGATTTAAGATCAGCTCCACACAGGACCTGCGGGGA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1285367 121 + 1864846 ctggcccttcccccgacact-ggggattataattcaatgtgaggtctggatgggggcatggattcaaatcatatcaGTGACTTTGTGGATTTAAGATCAGCTCCACACAGGACCTGGGGGGA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 74206 120 + 287728 caggcccttctcccgacact-ggggattataattcaacgtgaggtctgggc-gggacgtggattcaaaccgtatcaGTGCCTTTGCGGGTTTAAGATCAGCTCCACACAGGACCTGGGTGGA i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e otoGar3.GL873658 915826 1177 + 5252280 I e dasNov3.JH576208 1624507 30926 + 4416731 I a score=226173.000000 s hg38.chr2_KI270774v1_alt 76661 30 + 223625 AGAGGTGGGTGTTGGGGGAGGGCCTGGGCT s panTro5.chr2A 1354263 29 + 111504155 ATAGGTGGGTGTTGTGGGAGGGCCTGGGC- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1314424 29 + 114371477 ATAGGTGGGTGTTGTGGGACGGCCTGGGC- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1339207 30 + 1464242 AGAGGTGGGTGTTGGGGGAGAGCCTGGGCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1061443 30 + 81552678 AGAGGCGGGTGTTGGGGGAGGGCCTGGGCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1395139 30 + 108979918 AGAGGCAGGGGTTGTGGGAGGGCCTGGGCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1367426 30 - 111193037 AGAGGCAGGGGTTGTGGGAGGGCCTGGGCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1395981 30 + 3644372 AGAGGCAGGGGTTGTGGGAGGGCCTGGGCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1349506 30 - 10304083 AGAGGCGGGGGTTGTGGGAGGGCCTGGGCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1423023 30 - 107702431 AGAGGCGGGGGTTGTGGGAGGGCCTGGGCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 897994 30 - 2200435 AGAGGCGGGGGTTGTGGGAGGGCCTGGGCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1331368 30 - 13651311 AGAGGCGGTGGTTGTGGGAGGGCCTGGGCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1343315 28 - 108792865 AGGGGCGGGGATTGGG--GGGGCCTGGGCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1193626 29 - 7082604 AGGGGCGGGGATTGGG-AGGGGCCTGGGCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1285488 29 + 1864846 AGGGGCGGGGATTCGG-AGGGGCCTGGGCC i cebCap1.NW_016107827v1 C 0 I 15 s aotNan1.NW_018513311v1 74326 28 + 287728 AGGGGCGGGGATTGGA--GGGGCCTGGGCC i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1655433 30 + 4416731 AGGGGGGAGAGCAGGTGGCAGGAGTGGAGT i dasNov3.JH576208 I 30926 C 0 e mm10.chr12 89962715 21660 - 120129022 I e otoGar3.GL873658 915826 1177 + 5252280 I a score=51383.000000 s hg38.chr2_KI270774v1_alt 76691 11 + 223625 GGTCAGGTGGG- s panTro5.chr2A 1354292 7 + 111504155 ----AGGTGGG- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1314453 7 + 114371477 ----GGGTGGG- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1339237 11 + 1464242 GGTCAGGTGGG- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1061473 11 + 81552678 GGGCAGGTGGG- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1395169 11 + 108979918 AGGCAGGCGGG- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1367456 11 - 111193037 AGGCAGGCGGG- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1396011 11 + 3644372 AGGCAGGCGGG- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1349536 11 - 10304083 AGGCAGGCGGG- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1423053 11 - 107702431 AGGCAGGCGGG- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 898024 11 - 2200435 AGGCAGGCGGG- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1331398 11 - 13651311 AGGCAGGCGGG- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1343343 9 - 108792865 AGGCAGGAG--- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1193655 9 - 7082604 AGGCAGGAG--- i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 74354 9 + 287728 AGGCAGGAG--- i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1655463 11 + 4416731 -GGTAGGGAGGA i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e cebCap1.NW_016107827v1 1285517 15 + 1864846 I e otoGar3.GL873658 915826 1177 + 5252280 I a score=616226.000000 s hg38.chr2_KI270774v1_alt 76702 89 + 223625 -GGACCCTTGTGCCCAAGGACACCCTGTG-AACCTGCTGATATCAAGCTCAGGGACACCTGTGAACCCGCTGATAGCAAGCCTACC----TTGAA s panTro5.chr2A 1354299 89 + 111504155 -GGACCCTTGTGCCCAAGGACACCCTGTG-AACCTGCTGATATCAAGCTCAGGGACACCTGTCAACCCGCTGATAGCAAGCCTACC----TTGAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1314460 89 + 114371477 -GGACCCTTGTGCCCAAGGACACCCTGCG-AACCTGCTGATATCAAGCTCAGGGACACCTGTCAACCCGCTGATAGCAAGCCTACC----TTGAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1339248 89 + 1464242 -AGACCCTTGTGCCCAAGGGCACCCTGTG-AACCTGCTAATATCAAGCTCAGGGACACCTGTCAACCCGCTGATAGCAAGCCTACC----TTGAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1061484 89 + 81552678 -GGACCCTTGTGCCCAAGGACACCCTGTG-AACCTGCTGATATCAAGCTCAGGGACACCTGTGAACCCACTGATAGCAAGCCTACC----TTGAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1395180 86 + 108979918 -GGACCCTTGTGCTCAAGGACACCCTGTG-AACCTGC---TATCAAGCTCAGGGACAGCTGTGAACCCGCTGATATCAAGCCTACC----TTGAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1367467 86 - 111193037 -GGACCCTTGTGCTCAAGGACACCCTGTG-AACCTGC---TATCAAGCTCAGGGACAGCTGTGAACCCGCTGATATCAAGCCTACC----TTGAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1396022 86 + 3644372 -GGACCCTTGTGCTCAAGGACACCCTGTG-AACCTGC---TATCAAGCTCAGGGACAGCTGTGAACCCGCTAATATCAAGCCTACC----TTGAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1349547 86 - 10304083 -GGACCCTTGTGCTCAAGGACACCCTGTG-AACCTGC---TATCAAGCTCAGGGACACCTGTGAACCCACTGATATCAAGCCTACC----TTGAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1423064 86 - 107702431 -GGACCCTTGTGCTCAAGGACACCCTGTG-AACCTGC---TATCAAGCTCAGGGACCCCTGTGAACCCGCTGATATCAAGCCTACC----TTGAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 898035 86 - 2200435 -GGACCCTTGTGCTCAAGGACACTCTGTG-AACCTGC---TATCACGCTCAGGGACACCTGTGAACCCACTGATATCAAGCCTACC----TTGAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1331409 86 - 13651311 -GGACCCTTGTGCTCAAGGACACCCTGTG-AACCTGC---TATCAAGCTCAGGGACACCTGTGAACCCACTGATATCAAGCCTACC----TTGAA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1343352 56 - 108792865 -GGAGCCTTGTGCTCAGGGGCATCCTGTG-AGCCCAC---------------------------------TGGTGTCAAGCCTACC----TTCGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1193664 59 - 7082604 -GGACCCTTGTGCT-GGGGACATCCTATG-AGCGCAC---------------------------------TGGTGTCAAGCCTACCGTCAGTCAA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1285532 54 + 1864846 -GGACCCTTGTGCTCAGGGACATCCTGTG-AGCCCAC---------------------------------TGGTGTC--GTCTACC----TTCAA i cebCap1.NW_016107827v1 I 15 C 0 s aotNan1.NW_018513311v1 74363 56 + 287728 -GGACCCCTGTGCTCAGGGACATCCTGTG-AGCCCAC---------------------------------TGGTGTCAAGCCTACC----TTCAA i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1655474 64 + 4416731 GAGACTCTAGTGCTCAGCAATGTCACGTGTCACCTGG---TAT---------------------ACC---TGGTATCAGTCCTGCT----TTGAA i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e otoGar3.GL873658 915826 1177 + 5252280 I a score=2617319.000000 s hg38.chr2_KI270774v1_alt 76791 256 + 223625 GTCTGTTCAATGCTCTTCCAAATAAGGCCTGTGGAAACTCTCATGAGAAAAACAAGGCAAAA-ACTGCAGAAATACAACAGAATAGAT-ATACAGGAAATAAAAAGAGAGTTCCTAACTGGAAATGTCAATA------------CTTTATC-CAGGAAAAAATGCTCATGCGTGATTATT-GGAGTACAAATAAT---GTTTTTATGTTTCCAATTATATATTAGAATACATGAGAATTAGCTAAATCATGGTGACATTTCTAAATATTTCACTT s panTro5.chr2A 1354388 256 + 111504155 GTCTGTTCAATGCTCTTCCAAATAAGGCCTGCGGAAACTCTCATGAGAAAAACAAGGCAAAA-ACTGCAGAAATTCAACAGATTAGAT-ATACAGGAGATAAAAAGAGAGTTCCTAACTGGAAATTTCAATA------------CTTTATC-CAGGAAAAAATGCTCATGCGTGATTATT-GGAGTACAAATAAT---GTTTTTATGTTTCCAATTATATATTAGAATACATGAGAATTAGCTAAATCATGGTGACATTTCTAAATATTTCACTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1314549 256 + 114371477 GTCTGTTCAATGCTCTTCCAAATAAGGCCTGCGGAAACTCTCATGAGAAAAACAAGGCAAAA-ACTGCAGAAATTCAACAGATTAGAT-ATACAGGAGATAAAAAGAGAGTTCCTAACTGGAAATTTCAATA------------CTTTATC-CAGGAAAAAATGCTCATGCGTGATTATT-GGAGTACAAATAAT---GTTTTTATGTTTCCAATTATATATTAGAATACATGAGAATTAGCTAAATCATGGTGACATTTCTAAATATTTCACTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1339337 256 + 1464242 GTCTGTTCAGTGCTCTTCCAAATAAGGCCTGTGGAAATCCTCATGAGAAAAACAAGGCAAAA-ACTGCAGAAATACAACAGATTAGAT-ATACAGGAGATAAAAAGAGAGTTCCTAACTGGAAATGTCAATA------------CTTTATC-CAGGAAAAAATGCTCATGCATGATTATT-GGAGTACAAATAAT---GTTTTTATGTTTCCAATTATATATTAGAATACATGAGAATTAGCTAAATCATGGTGACATTTCTAAATATTTTACTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1061573 256 + 81552678 GTCTGTTCAATGTTCTTCCAAATAAGGCCTGTGGAAATTCTCATGAGAAAAACAAGGCAAAA-ACTGCAGAAATTCAACAGAATAGAT-ATATAGGAGATAAAAAGAGAGTTCCTAATTTGAAATGTCACTA------------CTTTATT-CAGGAAAAAATGCTCACTCGTGATTATT-GGAGTACAAATAAT---GTTTTTATGTTTCCAATTATATATTAGAATACATGAGAATTAGCTAAATCATGGTGACATTTTTAAATATTTTACTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1395266 256 + 108979918 GTCTGTTCAGTGCTCTTCCAAATAAGGCCTGTGGAAATTCTCATGAGAAAATCAAGGCAAAA-ACTGCAGAAATTCAACAAAATAGAT-ATATAGGAGATGAAAAGAGTGTTCCTAATTTGAAATGTCACTA------------CTTTATA-GACAAGAAAATGCTCACTTGTGATTATT-GGAGTACAAATAAT---GTTTTTATGTTTCCAATTATATATTAGAATACATGAGAATTAGCTAAATCATGGTGACATTTTTAAATATTTTACTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1367553 256 - 111193037 GTCTGTTCAGTGCTCTTCCAAATAAGGCCTGTGGAAATTCTCATGAGAAAATCAAGGCAAAA-ACTGCAGAAATTCAACAAAATAGAT-ATATAGGAGATGAAAAGAGTGTTCCTAATTTGAAATGTCACTA------------CTTTATA-GACAAGAAAATGCTCACTTGTGATTATT-GGAGTACAAATAAT---GTTTTTATGTTTCCAATTATATATTAGAATACATGAGAATTAGCTAAATCATGGTGACATTTTTAAATATTTTACTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1396108 256 + 3644372 GTCTGTTCAGTGCTCTTCCAAATAAGGCCTGTGGAAATTCTCATGAGAAAATCAAGGCAAAA-ACTGCAGAAATTCAACAAAATAGAT-ATATAGGAGATGAAAAGAGTGTTCCTAATTTGAAATGTCACTA------------CTTTATA-GACAAGAAAATGCTCACTTATGATTATT-GGAGTACAAATAAT---GTTTTTATGTTTCCAATTGTATATTAGATTACATGAGAATTAGCTAAATCATGGTGACATTTTTAAATATTTTACTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1349633 256 - 10304083 GTCTGTTCAGTGCTCTTCCAAATAAGGCCTGTGGAAATTCTCATGAGAAAATCAAGGCAAAA-ACTGCAGAAATTCAACAAAATAGAT-ATATAGGAGATGAAAAGAGCGTTCCTAATTTGAAATGTCTCTA------------TTTTATA-GACAAGAAAATGCTCACTTGTGATTATT-GGAGTACAAATAAT---GTTTTTATGTTTCCAATTATATATTAGAATACATGAGAATTAGCTAAATCATGGTGACATTTCTAAATATTTTACTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1423150 256 - 107702431 GTCTGTTCAGTGCTCTTCCAAATAAGGCCTGTGGAAATTCTCATGAGAAAATCAAGGCAAAA-ACTGCAGAAATTCAACAAAATAGAT-ATATAGGAGATGAAAAGAGTGTTCCTAATTTGAAATGTCACTA------------CTTTATA-GAAGAGAAAATGCTCACTTGTGATTATT-GGAGTACAAATAAT---GTTTTTATGTTTCCAATTATATATTAGAATACATGAGAATTAGCTAAATCATGGTGACATTTCTAAATATTTTACTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 898121 256 - 2200435 GTCTGTTCAGTGCTCTTCCAAATAAGGCCTGTGGAAATTCTCATGAGAAAATCAAGGCAAAA-ACTGCAGAAATTCAACAAAATAGAT-ATATAGGAGATGAAAAGAGCGTTCCTAATTTGAAATGTCACTA------------CTTTATA-GACGAGAAAATGCTCACTTGTGATTATT-GGAGTACGAATAAT---GTTTTTATGTTTCCAATTATATATTAGAATACATGAGAATTAGCTAAATCATGGTGACGTTTCTAAATATTTTACTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1331495 256 - 13651311 GTCTGTTCAGTGCTCTTCCAAATAAGGCCTGTGGAAATTCTCATGAGAAAATCAAGGCAAAA-ACTGCAGAAATTCAACAAAATAGAT-ATATAGGAGATAAAAAGAGCGTTCCTAATTTGAAATGTCACTA------------CTTTATA-GATGAGAAAATGCTCACTTGTGATTATT-GGAGTACAAATAAT---GTTTTTATGTTTCCAATTATGTATTAGAATACAGGAGAATTAGCTAAATCATGGTGACATTTCTAAATATTTTACTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1343408 256 - 108792865 GTCTGTTCAATGCTCTTTCAACTAAGGCCCGAGGAAATTCTCGTGAGAAAAACAAGGCAAAA-CCTGCAGAAATTCAACAAAATACATAACATAGGAGAAGAAAAGAGGATTCCTAATTTGAAATGTCACTA------------CTCTATC-CAGGAAAAAATGCTCACTCGTGATTATT-GGAGTACAAACAAT---GTTTTTATGTTTCCAACTATATAGTAGAGTA-ATGAGAATTAGCTAAATCATGGTGACATTTCTGAATATTTTACTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1193723 254 - 7082604 GTCTGTTCAGTGCTCTTTCAAC-AAGGCCTGAGGAAATTCTTGTGAGAAAAACAAGGCAAAA-CCTGCAGAAATTTAGGAAAATGCAT-ACATAGGAGAAGGAGAGAGGATTCCTGATTTGAAATGTCACTA------------CTTTATC-CAGGAAAAAATGCTCACTCGTGATTATT-GGAGTACAAATAAT---GTTTTTATGTTTCCAATTATGTATTATAATG-ATGAGAATTAGCTAAATCATGGTGACATTTCTAAGTATTTTACTT i saiBol1.JH378218 C 0 M 1586 s cebCap1.NW_016107827v1 1285586 254 + 1864846 GTCTGTTCAATGCTCTTTCAACTAAGGCCTGAGGAAATTATTGTGAGAAAAACAAGGCAAAA-CCTGCAGAAATTCAACAAAATACAT-ATATAGGAGAAGAAAAGAGGATTCCTAATTCAAAATATCACTG------------CTTTATC-CAGG-AAAAATGCTCACTTGTGATTATT-GGAGTACAAATAAT---GTTTTTGTGTTTCCAATTATATATTAGAATA-ATGAGAATCAGCTAAACCATGGTGACATTTCTAAATGTTTTACTT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 74419 251 + 287728 GTCAGTTCAATGCTCTTTCAACTAAGGCCTGAGGAAATTCTCTTGAGAAAAACAAGGCAAAA-CCTGCAGAAATTCAACAAAATACAC-ATGTAGGAGAAGAAAAGAGGA-TCCTAATTCGAAATGTCGC-A------------CTTTATC-CAGGAAGAAATGCTCACCCGTGATTATT-GGAGTACAAATAGT---GTTTT--AGTTTCCAATTATATATTCGAATA-TTGAGAATTAGCTAAATCATGGTGACATTTCTAAATATTTTACTT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 917003 264 + 5252280 GTCTATTCAATATTCTTCCACATAAGCTACGTGAAAATTGTCAAGAGGAACATAAAGTAAAA-CTTAGAAACATTCCACTAAATGGAT-TCATAGGCAAGGAGAAGAGGGTTCTGAATTCAAGAT-TCAATATGAGGAGGGTTTCTTCATATGGGGAAGAAATACCTGTCAGTGATTA----AAGTTCTAATAAGTAAATTTTTTTGTT---AAATATTAAAAGGAATA-GAGAAAATGTGTAAAATTATGATGATATTTCTAAATATTTTTCAC i otoGar3.GL873658 I 1177 I 1 s dasNov3.JH576208 1655538 247 + 4416731 CTCTGCTCAGTATTCCTCTGAGTAAGTTACGTGAATATCTTTATGATGAAACAAAGGGAAAACACTGAACAAATCTAACCAAACAGAT-TTATGGGAGATGAGAA-AGGGTCCCAAATACGAAACATCACTA------------CTTCATT-TTGGGA---------ATCTGTATTTATTAAGAGTCCAAATAATCACCCTTGTATGTATCAAATTAAAGATTTGAA---AAAAATAGTAGGCAGATCATAG-GATAGTTCtaaatattttattt i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I a score=557169.000000 s hg38.chr2_KI270774v1_alt 77047 56 + 223625 CTTCTTTACGCATTTATTGCTA-----------TAAGGACACTATCTGAAAAGTGGAGCTACTATTT s panTro5.chr2A 1354644 56 + 111504155 CTTCTTTACGCATTTATTGCTA-----------TAAGGACACTATCTGAAAAGTGGAGCTACTATTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1314805 56 + 114371477 CTTCTTTACGCATTTATTGCTA-----------TAAGGACACTATCTGAAAAGTGGAGCTACTATTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1339593 56 + 1464242 CTTCTTTATGCATTTATTGCTA-----------TAAGGACACTATCTGAAAAGTGGAGCTACTATTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1061829 56 + 81552678 CTTCTTTACTCATTTATTGCTA-----------TAAGGACACTATCTGAAAAGTGGAGCTACTATTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1395522 56 + 108979918 CTTCTTTACTCATTTATTGCTA-----------TAAGGACACTATCTGAAAAGTGGAGCTACTATTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1367809 56 - 111193037 CTTCTTTACTCATTTATTGCTA-----------TAAGGACACTATCTGAAAAGTGGAGCTACTATTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1396364 56 + 3644372 CTTCTTTACTCATTTATTGCTA-----------TAAGGACACTATCTGAAAAGTGGAGCTACTATTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1349889 56 - 10304083 CTTCTTTACTCATTTATTGCTA-----------TAAGGACACTATCTGAAAAGTGGGGCTACTATTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1423406 56 - 107702431 CTTCTTTACTCATTTATTGCTA-----------TAAGGACACTATCTGAAAAGTGGGGCCACTATTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 898377 56 - 2200435 CTTCTTTACTCATTTATTGCTC-----------TAAGGACACTATCTGAAAAGTGGAGCTACTGTTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1331751 56 - 13651311 CTTCTTTACTCATTTATTGCTA-----------TAAGGACACTATCTGAAAAGTGGAGCTACTATTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1343664 56 - 108792865 CTTCTTTACACGTTTATTGCTA-----------TAAAGACACTATCTTAAAAGTGGAGCTACTATTT i calJac3.chr14 C 0 I 292 s cebCap1.NW_016107827v1 1285840 56 + 1864846 CTTCTTTACTCATTTATTGCTA-----------TAAAGACACTATCTTAAAAGTGGAGCTACTATTT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 74670 56 + 287728 CTTCTTTACCCGTTTATTGCTA-----------TAAAGACACTATCTTAAAAGTGGAGCTACTATTT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 917268 55 + 5252280 TTTTGTGACTTGTTCGTTGGTA-----------TGAA-AGATTATCTTAAAAGTGCAGCTACTGTTA i otoGar3.GL873658 I 1 C 0 s dasNov3.JH576208 1655785 64 + 4416731 ---atttattCTTTTCTCACTATGGGTATTAAGTGAGTAGAGTTTCTTAAAAGTGTTGCTCCTATGT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1193977 1586 - 7082604 M a score=2023983.000000 s hg38.chr2_KI270774v1_alt 77103 223 + 223625 ATTTCAATATTTTAAGTAGACTGTGA---------------AAGAT-AAAACAGACCGTGAAGTAATTCGTTGATG-TTTATGTGTCAAGGGCGCTTTAGTAACCTTTCAAATACCACTTTCAACTTA-AG-CCACCTATCTCCTCCATGTGACAATTTTCAATACTTCCAAAGTAAGAGTTTTACCTAGAAATCATTGACAAAATATGTCCAG-CAGCCCCCAAATATTTCACTACATCCAC s panTro5.chr2A 1354700 223 + 111504155 ATTTCAATATTTTAAGTAGACTGTGA---------------AAGAT-AAAACAGACCGTGAAGTAATTCGTTGATG-TTTATGTGTCAAGGGTGCTTTAGTAACCTTTCAAATACCACTTTCAACTTA-AG-CCACCTATCTCCTCCATGTGGCAATTTTCAATACTTCCAAAGTAGGAGTTTTACCTAGAAATCATTGACAACATATGTCCAG-CAGCCCCCAAATATCTCACTATATCCAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1314861 223 + 114371477 ATTTCAATATTTTAAGTAGACTGTGA---------------AAGAT-AAAACAGACCGTGAAGTAATTCGTTGATG-TTTATGTGTCAAGGGTGCTTTCGTAAGCTTTCAAATACCACTTTCAACTTA-AG-CCACCTATCTCCTCCATGTGGCAATTTTCAATACTTCCAAAGTAGGAGTTTTACCTAGAAATCATTGACAACATATGTCCAG-CAGCCCCCAAATATCTCACTATATCCAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1339649 223 + 1464242 ATTTCAATATTTTAAGTAGACTGTGA---------------AAGAT-AAAACAGACCGTGAAGTAATTCGTTGATG-TTTATGTGTCAGGAGAGATTTAGTAACCTTTCAAATACCACTTTCAACTTA-AG-CCACCTATCTCCTCCATGTGGCAATTTTCAATACTTCCAAAGTAGGAGTTTTACCTAGAAATCATTGACAAAGTATGTCCAG-CAGCCCCCAAATATTTCACTATATCCAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1061885 223 + 81552678 ATTTCAATATTTTAAGTAGACTGTGA---------------AAGAT-AAAACAGACCATGAAGTAATGCATTGATG-TTTATCTGTCAAGGGAGATTTAGTAAGCTTTCAAATACCACTTTCAACTTA-AG-CTGCTTATCTCCTCCATGTGGCAATTTTCAATACTTCCAAAGTAGGAGTTTTACCTAGAAATCATTGACAAAATATGTCCAG-CAGCCCCCAAATATTTCACTATATCCAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1395578 221 + 108979918 ATTTCAATATTTTAAGTAGACTGTGA---------------AAGAG-AAAACAGAC--CGAAGTAATTCATTGGTG-TTTAGGTGTCAAGGGGGCTTTAGTAAGCTTTCAAATACCACTTTCAACTTA-AG-CTGCTTATCTCCTCCATGTGGCAACTTTCAGTACTTCCAAAGTAGGAGTTTTACCTAGAAATCATTGACAAAATATGTCCAG-CAGCTCCCAAATATTTCACTATATCCAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1367865 221 - 111193037 ATTTCAATATTTTAAGTAGACTGTGA---------------AAGAG-AAAACAGAC--CGAAGTAATTCGTTGGTG-TTTAGGTGTCAAGGGGGCTTTAGTAAGCTTTCAAATACCACTTTCAACTTA-AG-CTGCTTATCTCCTCCATGTGGCAACTTTCAGTACTTCCAAAGTAGGAGTTTTACCTAGAAATCATTGACAAAATATGTCCAG-CAGCTCCCAAATATTTCACTATATCCAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1396420 221 + 3644372 ATTTCAATATTTTAAGTAGACTGTGA---------------AAGAG-AAAACAGAC--CGAAGTAATTCGTTGGTG-TTTAGGTGTCAAGGGGGCTTTAGTAAGCTTTCAAATACCACTTTCAACTTA-AG-CTGCTTATCTCCTCCATGTGGCAACTTTCAGTACTTCCAAAGTAGTAGTTTTACCTAGAAATCATTGACAAAATATGTCCAG-CAGCTCCCAAATATTTCACTATATCCAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1349945 222 - 10304083 ATTTCAATATTTTAAGTAGACTGTGG---------------AAGAT-AAAACAGACTGTGAAGTAA-TCGTTGGTG-TTTAGGTGTCAAGGGGGCTTTAGTAAGCTTTCAAATACCACTTTCAACTTA-AG-TTGCTTATCTCCTCCATGTGGCAATTTTCAGTACTTCCAAAGTAGGAGTTTTACCTAGAAATCATTGACAAAATATGTCCAG-CAGCTCCCAAATATTTCACTATATCCAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1423462 220 - 107702431 CTTTCAATATTTTAAGTAGACTGTGA---------------AAGAT-AAAACAGAC--TGAAGTAATTCGTTGGTG-TTTAGGTGTCAA-GGGGCTTTAGTAAGCTTTCAAATACCACTTTCAACTTA-AG-CTGCTTATCTCCTCCATGTGGCAATTTTCAGTACTTCCAAAGTAGGAGTTTTACCTAGAAATCATTGACAAAATACGTCCAG-CAGCTCCCAAATATTTCACTATATCCAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 898433 223 - 2200435 ATTTCAATATTTTAAGTAGACTGTGA---------------AAGAT-AAAACAGACCATGAAGTAATTCGTTGGTG-TTTAGGTGTCAAGGGGGCTTTAGGAAGCTTTCAAATACCACTTTCAACTTA-AG-CTGCTTATCTCCTCCATGTGGCAATTTTCAGTACTTCCAAAGTAGGAGTTTTACCTAGAAATCATTGACAAAATATGTCCAG-CAGCTCCCAAATATTTCACTATATCCAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1331807 223 - 13651311 ATTTCAATATTGTAAGTAGACTGTGA---------------AAGAT-AAAACAGACCGTGAAGTAATTTGTTGATG-TTTAGGTGTCAAGGGGTCTTTAGTAAGCTTTCAAATACCACTTTCAACTTA-AG-CTGCTTATCTCCTCCATGTGGCAATTTTCAGTACTTCCAAAGTGGGAGTTTTACCTAGAAATCATTGACAAAATATGTCCAG-CAGCTTCCAAATATTTCACTATATCCAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1344012 222 - 108792865 ATTTCAATATTTTAAGTAGACTGTGA---------------AAGGTAAAAACGGACCTTGGAGTAATTCTTTGATG-TTTATGTGTCAAGGAGGCTTTA--AAGCTTCCAAATACCACCTTCAACCCA-AG-TCCCTTATCTCCTCCATGTAACAGTTTCCAATACTTCCAAAGTAGGAGTTTTACCTGGAAATCATTGACTAAATATGCCCAG-CAGCCCCCAGGGgtctcaccgtgtcccg i calJac3.chr14 I 292 I 275 s cebCap1.NW_016107827v1 1285896 222 + 1864846 ATTTCAATATTTTAAGTAGACTGTGA---------------AAGGTAAAAACAGACCATGGGGTAATTCGTTGATG-TTTATGTGTCAAGGAGGCTTTA--AAGCTTTCAAATACCACCTTCAACCCA-AG-TCCCTTATGTCCTCCATGTAACAGTTTCCAGTACTTCCAAAGTCAGAGTTTTACCTGGAAATCATTGAATAAATATGCCCAG-CAGTCCCCAGGTGTCTCACTGTGTCCTG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 74726 221 + 287728 ATTTCAATATTTTAAGTAGACTGTGA---------------AAGGTAAAAACGGACCGTGGAGTAACTCGTTGATG-TTTATGTGTCAAGGAGGCTTTA--AAGCTTTCACA-ACCACCTTCGACCCA-AG-TCCCTGGTCTCCTCCGTGGAACAGTTTCCGATACTTCCGAAGTAGGAGTTTTACCTGGAAATCATTGACTAAATATGCCCAG-CAGCCCCCAGGTGTCTCACTGTGTCCCG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 917323 220 + 5252280 -ATTCTGAACATTGAGTAGGC--TAA---------------GAGGT-GGAACATGCTCTGGAGAAATTAGTCTACA-TCTGTGGGTCAAGGTGGCTTTAAGAATCTTCCAAGTAGCACTTCCGACTTGCAC-TTGCTTATCTCCTCCCTATACCGATTTTCAAAGCTTCCAAAGTAGGGGTTTTGCCTGGAAAATGTTGATAAGATGTGTCTGT-CAGC-CCCAAACCCTCTGCCACATTTGG i otoGar3.GL873658 C 0 I 3 s dasNov3.JH576208 1655849 240 + 4416731 GTTTCCATATAAGAAGTAAACTCTGAAAAGGGACAATGTACAAGGG-GAAATATGTTATGAAGCAATTTGTTTAAGTTTTATGTCTCAAAATTGTTTTAGAAATTGTTCAAGTCTCACTTTCAGCTTA-AGTTTGCTTATCTCCTCCATATATCAGTTTTTCA-ACTTCTAAGAAAATATTTTCACCTGTAAAATATCGGCAAAATATGACCAATCAGCCCCAAAGTACTTTGCCATATCCAG i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1193977 1586 - 7082604 M a score=1264879.000000 s hg38.chr2_KI270774v1_alt 77326 146 + 223625 ---TATCACCTTCCACATTGAAGCATTTAGC-ACGATATGG------AGTTGTCCCAGGCTTGAAGACTGTGAATA-CGGTGGAATATTAAAGCT--AAAGTTTACAGG--------------------AAAACACAAATA---------TTGACATCTTATACATTTCAGCTATTTTTTCCTGTAAT s panTro5.chr2A 1354923 146 + 111504155 ---TATCACCTTCCACATTGAAGCATTTAGC-ACGATATGG------AGTTGTCCCAGGCTTGAAGACTGTGAATA-CGGTGGAATATTAAAGCT--AAAGTTTACAGG--------------------AAAACACAAATA---------TTGACATCTTATACATTTCAGCTATTTTTTCCTGTAAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1315084 146 + 114371477 ---TATCACCTTCCACATTGAAGCATTTAGC-ACGATATGG------AGTTGTCCCAGGCTTGAAGACTGTGAATA-CGGTGGAATATTAAAGCT--AAAGTTTACAGG--------------------AAAACACAAATA---------TTGACATCTTATACATTTCAGCTATTTTTTCCTGTAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1339872 146 + 1464242 ---TATCACCTTCCGCATTGAAGCATTTAGC-ACGATATGG------AGTTGTCCCAGGCTTGAAGACTATGAATA-CGGTGGAATATTAAAGCT--AAAGTTGACAGG--------------------AAAACACAAATA---------TTGACATCTTAAACATTTCAGCTATTTTTTCCTGTAAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1062108 146 + 81552678 ---TATCACCTTCCACATTGAAGCATTTAGC-ACGATATGG------AGTTGTCCCAGGCTTGAAGACTATGAATA-CGGTGGAATATTAAAGCT--AAATTTGACAGG--------------------AAAACACAAATA---------TTGACATCTTATACATTTCAGCTGTTTTTTCCTGTAAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1395799 146 + 108979918 ---TATCCCCTTCCACATTGAAGCATTTAGC-ACGATATGG------AGTTGTCCCAGGCTTGAAAACTATGAACA-TGGTGGAATATTAAAGCT--AAAGTTGACAGG--------------------AAAACACAAATA---------TTGACATCTTATACATTTCAGCTATTTTTTCCTGTAAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1368086 146 - 111193037 ---TATCCCCTTCCACATTGAAGCATTTAGC-ACGATATGG------AGTTGTCCCAGGCTTGAAAACTATGAACA-TGGTGGAATATTAAAGCT--AAAGTTGACAGG--------------------AAAACACAAATA---------TTGACATCTTATACATTTCAGCTATTTTTTCCTGTAAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1396641 146 + 3644372 ---TATCCCCTTCCACATTGAAGCATTTAGC-ACGATATGG------AGTTGTCCCAGGCTTGAAAACTATGAACA-TGGTGGAATATTAAAGCT--AAAGTTGACAGG--------------------AAAACACAAATA---------TTGACATCTTATACATTTCAGCTATTTTTTCCTGTAAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1350167 146 - 10304083 ---TATCACCTTCCACATTGAAGCATTTAGC-ACGATATGG------AGTTGTCCCAGGCTTGAAAACTATGAACA-TGGTGGAATATTAAAGCT--AAAGTTGACAGG--------------------AAAACACAGATA---------TTGACATCTTATACATTTCAGCTATTTTTTCCTGTAAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1423682 146 - 107702431 ---TATCACCTTCCACATTGAAGCATTTAGC-ACGATATGG------AGTTGTCCCAGGCTTGAAAACTATGAACA-TGGTTGAATATTAAAGCT--AAAGTTGACAGG--------------------AAAACACAAATA---------TTGACATCTTATACATTTCAGCTATTTTTTCCTGTAAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 898656 146 - 2200435 ---TATCACCTTCCACATTGAAGCATTTAGC-ATGATATGG------AGTTGTCCCAGGCTTGAAAACTATGAACA-TGGTGGAATATTAAAGCT--AAAATTGACAGA--------------------AAAACACAGATA---------TTGACATCTTACACATTTCAGCTATTTTTTCCTATAAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1332030 146 - 13651311 ---TATCACCTTCCACATTGAAGCATTTAGC-ACAATGTGG------AGTTGTCCCAGGCTTGAAAACTATGAACA-TGGTGGAATATTAAAGCT--AAAGTTTACAGG--------------------AAAACACAAATA---------TTGACATCTTATACATTTCAGCTATTTTTTCCTGTAAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1344509 140 - 108792865 ---TATCA-CTTTTATATCGAAGCATTTAGC-ACGAC-TGG------AGTTGCTTCAGGCGAGCAAACTATGAATA-TGGTGGACGATTGAAGCT--AAACTTGACAGG--------------------AAAACACAGATG---------CTGACATCTTACACGTTTCAGATGCTTTTTCTTG---- i calJac3.chr14 I 275 C 0 s cebCap1.NW_016107827v1 1286118 144 + 1864846 ---TATCA-CTTCCGCATGGAAGCATTTAGC-ACGAC-TGC------AGTGGTTTCAGGCAAGAACACTACGAATA-TGGTGGATGATTGAAGCT--AAACCCGACAGG--------------------AAAACACACATG---------TTGACATCTTACACGTTTCGGCTGTCTTTTCCTGTGAT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 74947 144 + 287728 ---TGTCA-CTTCCGCCTCGAAGCATTTAGC-ACGAC-TGG------AGTTGTTTCAGGCAAGAAAACGATGAATA-TGGTGGACGATTGAAGCT--AAACTTGACAGG--------------------AAAACACGAATG---------TTGAcatcttacacatttcagctgttttttcctgtaat i aotNan1.NW_018513311v1 C 0 I 392 s otoGar3.GL873658 917546 160 + 5252280 ---CCTCATCTTCCA-----AAGTGTTAATC-ATGATGTATTAAAACATCTGTCCCAGGCTCCAA-ACCATGAATC-CAGGGCAGGGAGGAGGCT--ATACTTGGCGAGATGATGTCTATATTATTAACAAAACACAAATT---------TTGGTGTATTAGACATTTTACTTATATTTTGT------ i otoGar3.GL873658 I 3 C 0 s dasNov3.JH576208 1656089 161 + 4416731 TAGCCTCACCTTTCACATTGAAATATAAATCAATGATATGT------ATCTGTCACAGGCTTCAAATTACTAAATACTGTTGGAATAGTAAAGATAAAAAGTTGATGGG--------------------ATAATGCTTATACATAAAAACTTAAGATCTTATACATTAAAAATATTTTTTC-TGCAAT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1193977 1586 - 7082604 M a score=1405932.000000 s hg38.chr2_KI270774v1_alt 77472 190 + 223625 ATAAGAACCTTGTAATGGAACGTATAA--AGGGGAAATTGACTCTC-AGACAGTTTCA-TTTTGACGACCATGGAGGGTACATCATCGGGCTTCGATGCCGCCTGCACTGA---GCAGAAGCA-CCTTGATCTGCCAAG-ACCTCAAAATACGGGCTGGC----------CC---AGCCACCACA-----GGATGGGGAAGGCTGGAT---------------TCTCTGAAT s panTro5.chr2A 1355069 190 + 111504155 ATAAGAACCTTGTAATGGAATGTATAA--AGGGGAAATCGACTCTC-AGACAGTTTCA-TTTTGACGACCATGGAGGGTACATCATCGGGCTTCGATGCTGCCTGCACTGA---GCAGAAGCA-CCTCGATCTCCCAAG-ACCTCAAAATACGGGCTGGC----------CC---AGCCACCACA-----GGATGGGGAAGGCTGGAT---------------TCTCTGAAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1315230 190 + 114371477 ATAAGAACCTTGTAATGGAATGTATAA--AGGGGAAATCGACTCTC-AGACAGTTTCA-TTTTGACGACCATGGAGGGTACATCATCGGGCTTCGATGCTGCCTGCACTGA---GCAGAAGCA-CCTCGATCTCCCAAG-ACCTCAAAATACGGGCTGGC----------CC---AGCCACCACA-----GGATGGGGAAGGCTGGAT---------------TCTCTGAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1340018 190 + 1464242 ATAAGAACCTTGTAATGGAACGTATAA--AGGGGAAATCGACTCTC-AGACAGTTTCA-TTTTGACGACCATGGAGGGTACATCATCAGGCTTCGATGCTGCCTGCACTGA---GCAGAAGCA-CCTCGATCTGCCAAG-ACCTCAAAATACGGGCTGGC----------CC---AGCCACCACA-----GGATGGGGAAGGCTGGAT---------------TCTCTGAAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1062254 184 + 81552678 ATAAGAACCTTGTAATGGAACGTATAA--ATGGGAAATAGACTCTC-AGACGGTTTCA-TTTTGAGGAGCATGGAGGGT------TCGGGCTTCGATGCTGCCTGCAGTGA---GCAGAAGCA-CCTCGGTCTGCCAAG-ACCTCAAAATACGGGCTGGC----------CC---GGCCACCACA-----GGATGGGGAAGGCTGGAT---------------TCTCTGAAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1395945 189 + 108979918 ATAAGAACCTTGTAATGGAACGTATAA--AGGGGAAATCAGCACTC-AGATGGTTTCA-TTTTGACGAGCATGGAGGGTACGTCATCAGGCTTTGATGCTGCCTGCACTGA---GCAGAAGCA-CCTCGATCTGCCAAG-ACATCAAAATACAGGCTGGC----------CC---GGCCACCACA------GACAGGGAAGGCTGGAT---------------TCTCTGAAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1368232 189 - 111193037 ATAAGAACCTTTTAATGGAACGTATAA--AGGGGAAATCAGCACTC-AGATGGTTTCA-TTTTGACGAGCATGGAGGGTACGTCATCAGGCTTTGATGCTGCCTGCACTGA---GCAGAAGCA-CCTCGATCTGCCAAG-ACATCAAAATACAGGCTGGC----------CC---GGCCACCACA------GACAGGGAAGGCTGGAT---------------TCTCTGAAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1396787 189 + 3644372 ATAAGAACCTTGTAATGGAACGTATAA--AGGGGAAATCAGCACTC-AGATGGTTTCA-TTTTGACGAGCATGGAGGGTATGTCATCAGGCTTTGATGCTGCCTGCACTGA---GCAGAAGCA-CCTCGATCTGCCAAG-ACATCAAAATACAGGCTGGC----------CC---GGCCACCACA------GACAGGGAAGGCTGGAT---------------TCTCTGAAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1350313 189 - 10304083 ATAAGAACCTTGTAATGGAATGTATAA--AGGGGAAATCGACACTC-AGATGGTTTCA-TTTTGACGAGCATGGAGGGCACGTCATCAGGCTTTGATGCTGCCTGCACTGA---GCAGAATCA-CCTCAATCTGCCAAG-ACCTCAAAATACAGGCTGGC----------CC---GGCCACCACA------GACAGGGAAGGCTGGAT---------------TCTCTGAAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1423828 189 - 107702431 AGAAGAACCTTGTAATGGAACGTATAA--AGGGGAAATCGGCACTC-AGATGGTTTCA-TTTTGACGAGCATGGAGGGTACGTCATCAGGCTTCAATGCTGCCTGCACTGA---GCAGAAGCA-CCTCGATCTGCCAAG-ACATCAAAAGACAGGCTGGC----------CC---GGCCACCACA------GAGGGGGAAGGCTGGAT---------------TCTCTGAAT i chlSab2.chr14 C 0 I 210 s manLeu1.NW_012103754v1 898802 189 - 2200435 ATAAGAACCTTGTAATGGAACATATAA--AGGGGAAATCGACACTC-AGATGGTTTCA-TTTTGATGAGCATGGAGGGTATGTCATCAGGCTTCGATGCTGTCTGCACTGA---GCAGAATCA-CCTCAATCTGCCAAG-ACCTCAAAATACAGGCTGGC----------CC---GGCCACCACA------GACGGGGAAGGCTGGAT---------------TCTCTGAAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1332176 189 - 13651311 ATAAGAACCTTGTAATGGAATGTATAA--AGGGGAAATCGACACTC-AGATGGTGTCA-TTTTGACGAGCATGGAGGGTACGTCATCAGGCTTCGATGCTGCCTGCACTGA---GCAGAAGCA-CCTCGATCTGCCAAG-ACCTCAGAGTACAGGCTGGC----------CT---GGCCACCACA------GATGGGGAAGGCTGGAT---------------TCTCTGAAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1344649 187 - 108792865 -TAAG-ACCTCGTAATGGAACGTATGA--AGGGGAAATCAACTCTC-AGACGGTTTCA-TGTTGATGAGCACGGAGGGTACGTCCTCGGGCTTTGATGCTGCCTGCGCTGA---GCAGAAGCA-CCTCGAGATGCCAGG-ACCTCAAAATCCAGGCCGGC----------CT---GGCCCCCACA------GGAGGGGAAGGCTGGAT---------------TCTCTGCAT i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1286262 185 + 1864846 ATAAG-ACCTCGTAATGAAGCGTATGA--AGGGGAAATCAACTCTC-AGACGGTTTCA-CGTTGACAAGCACGGAGGGT--GTCCTCGCGCTTCGATGCTGCCTGCACTGA---GCAGAAGCA-CCTCAAGCTGCCGAG-ACCTCAACATCTGGGCCGAC----------CT---GGCCCCCTCA------GGA-GGGAAGGCTGGCT---------------TCTCTTCAT i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 917706 183 + 5252280 ATAAT-GCCTTCCAGAAGAAAATATGATGTGAGGAAATCAACCTTC-AGAAGA--------GTGGGGAGCATCAGGAACAC-------GGCTGTAATATTGTCCATACTGA---GGGTAGAAA-CCCCCAACTGCCACA---CCCCAAACAGGGGCTGAT----------GCAATGGTCATCACCTCCCAGAACAGTGGAGGCTGGGT---------------GCTCTGGAC i otoGar3.GL873658 C 0 I 2 s dasNov3.JH576208 1656250 215 + 4416731 ------ACCCTGGAATGGAAAGTACAA--ATAGGGAAATAAGTCTCGACACGATTTGATTTTTGATGGGCGTGGGATATAAATACTATGGCTTTAATGCTGTCTCCACAGAGCTGCAGAATCATCCTAAGTCTATCAAAAACCTCAAAATTCGGGTTGACATTCACATAACT---ATCTGTTAGC------AATGGTGAAAGTCAGATCCCAGCAGTATCACCTCTCTAAGC i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 75091 392 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1193977 1586 - 7082604 M a score=34792.000000 s hg38.chr2_KI270774v1_alt 77662 5 + 223625 AGGAT s panTro5.chr2A 1355259 5 + 111504155 GGGAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1315420 5 + 114371477 GGGAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1340208 5 + 1464242 GGGAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1062438 5 + 81552678 GGGAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1396134 5 + 108979918 GGGAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1368421 5 - 111193037 GGGAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1396976 5 + 3644372 GGGAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1350502 5 - 10304083 GGGAT i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 898991 5 - 2200435 GGGAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1332365 5 - 13651311 GGGAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1344836 5 - 108792865 GGGAT i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1286447 5 + 1864846 GGGAT i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 917891 3 + 5252280 GAG-- i otoGar3.GL873658 I 2 C 0 s dasNov3.JH576208 1656465 5 + 4416731 AAGAT i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 75091 392 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1193977 1586 - 7082604 M e chlSab2.chr14 1424017 210 - 107702431 I a score=797795.000000 s hg38.chr2_KI270774v1_alt 77667 121 + 223625 GTGGAATGGTCAGGC------------------------AGGTGCCTGGATCC-AGA-----------------CCCGCCGAACAGACGTCTCCAGGAATGCTCCTTTAACACTTGAAGCATGCATGTCTCACCTGTGAGATGGAGAAAG------TGTGTCTCCCAGG s panTro5.chr2A 1355264 121 + 111504155 GTTGAACGGTCAGGC------------------------AGGTGCCTGGATCC-AGA-----------------CCCGCCGAACAGACGTCTCCAGGAATGCTCCTTTAACACTTGAAGCATGCATGTCTCACCTGTGAGATGGAGAAAG------TGTGTCTCCCAGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1315425 121 + 114371477 GTTGAACGGTCAGGC------------------------AGGTGCCTGGATCC-AGA-----------------CCCGCCGAACAGACGTCTCCAGGAATGCTCCTTTAACACTTGAAGCATGCATGTCTCACCTGTGAGATGGAGAAAG------TGTGTCTCCCAGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1340213 121 + 1464242 GTGGAATGGTCAGGC------------------------AGGTGCCTGGATCC-AGA-----------------CCCGCCGAACAGACGTCTCCAGGAATGCTCCTTTAACACTTGAAGCGTGCATGTCTCACCTGTGAGATGGAGAAAG------TGTGTCTCCCAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1062443 121 + 81552678 ATGGAATAGTCAGGC------------------------AGGTGCCTGGATCC-AGA-----------------CCCGCCGAACAGATGTCTCCAGGCATGCTCCTTTAACACTTGAAGCGTGCATGTCTTACCTGTGAGATGGAGAAAG------TGTGTCTCCCAGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1396139 138 + 108979918 GTGGAATGGGCAGGCAG-GGCC-----TACTGGT-CATTAGGTGCCTGGATCT-AGA-----------------CCCACCAAACAAACGTCCCTGGAGATACTCCTTTAACACTTGAAGCATGCATGTCTCACCTGTGAGATGGAGAAAG------TATGTCCCCCAGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1368426 138 - 111193037 GTGGAATGGGCAGGCAG-GGCC-----TACTGGT-CGTTAGGTGCCTGGATCC-AGA-----------------CCCACCAAACAAACGTCCCTGGGAATACTCCTTTAACACTTGAAGCATGCATGTCTCACCTGTGAGATGGAGAAAG------TATGTCCCCCAGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1396981 138 + 3644372 GTGGAATGGGCAGGCAG-GGCC-----TACTGGT-CATTAGGTGCCTGGATCC-AGA-----------------CCCACCAAACAAACGTCCCTGGGAATACTCCTTTAACACTTGAAGCATGCATGTCTCACCTGTGAGATGGAGAAAG------TATGTCCCCCAGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1350507 138 - 10304083 GTGGAATGGGCAGGCAG-GGCC-----TACTGGT-CATTAGGTGCCTGGATCT-AGA-----------------CCCACCAAACAGACATCCCTGGGAATACTCCTTTAACACTTGAAGTATGCATGTCTCACCTGTGAGATGGAGAAAG------TATGTCCCCCAGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1424227 138 - 107702431 GTGGAATGGGCAGGCAG-GGCC-----TACTGGT-CATTAGGTGCCTGGATCC-AGA-----------------CCCGCCAAACAGACGTCCCTGGGAATACTCCTTTAACACTTGAAGTATGCATGTCTCACCTGTGAGATGGAGAAAG------TATGTCCCCCAGG i chlSab2.chr14 I 210 C 0 s manLeu1.NW_012103754v1 898996 138 - 2200435 GTGGAATGGGCAGGCAG-GGCC-----TACTGGT-CATTAGGTGCCTGGATCC-AGA-----------------CCCGCCAAACAGACGTCCCTGGGAGTACTCCTTTAACACTTGAAGTATGCATGTGTCACCTGTGAGATGGAGAAAG------TATGTCCCCCAGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1332370 138 - 13651311 GTGGAATGGGCAGGTAG-GGCC-----TACTGGT-CACTAGGTGCCTGGATCC-AGA-----------------CCCGCCAAACAGACGTCTCTGAGAATACTCCTTTAGCACTTGAAGTATGCATGTCTCACCTGTGAGATGGAGAAAG------TATGTCCCGCAGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1344841 138 - 108792865 GTGGAGTGGTCGGGGGGTGGGC-----AACTGAT-CACGAGGCATCTGGACCC-TGA-----------------CCCGCAGAACAGAGGGCTCCGGGAATGCTCCTTAGACACTTGGAGGATGCTTGTCTCA-CTGTGAGGTGGAGACAG------TGTGTCTCCCAGG i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1286452 136 + 1864846 GTGGAGTGGTCGCGGG--GGGC-----AACTGAT-CACGAGGTGTCTGGACCC-TGA-----------------CCAGCAGAACAGAGGGCTGCGGGAATGCCCCTTAGACACTTGGAGGATGCCTGTCTCA-CTGTGAGGTGGAAAAAG------TGTGTCTCCCAGG i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 917894 132 + 5252280 GCCCTGTGGTCAGACTC-GGGCATGATCACTGAG-TAACAGATGTCCAGACCCAAGG-----------------TTTGCTGAGGGGAAGTCTTCAG-------------ACACCCTGAGTGTCGACCTGTCATCTATACCGTGGAGAAAGT-----TACATCTCCCAAG i otoGar3.GL873658 C 0 I 51 s dasNov3.JH576208 1656470 154 + 4416731 GCTGAATAGTTCATCGG----------GACTGATCcattggatggctaggtca-agaatgtccaggtccagtggcttgcgaagcatatgt--tagagtatgacatttagacactcacggcattgccttctcatctataaaatggatacagtcataatatttacctta-- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 75091 392 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1193977 1586 - 7082604 M a score=1658202.000000 s hg38.chr2_KI270774v1_alt 77788 222 + 223625 -CCAGTG-GGGCTGGGATTGGAGAGGATGGAACAGGCAAATGCAAACGTGAGAAAGTGACCTTcagggccactgtcctggacgcatggaccgagcgtc--acccgggccc--tgcccagagagtcct---gcctggtctaatgctctgctgtcactggtctgaaatggtttataattttttgagaaggggccatgggtttttaatttgcactgagcccttcacattctgta s panTro5.chr2A 1355385 222 + 111504155 -CCAGTG-GGGCTGGGATTGGAGAGGATGGAACAGGCAAATGCAAACGTGAGAAAGCGACCTTcagggccactgtcctggacgcatggaccgagcatc--acccgggccc--tgcccagagagtcct---gcctggtctaatgctctgctgtcactggtctgaaatggtttataattttttgagaaggggccatgggtttttaatttgcactgagcccttcacattctgta i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1315546 222 + 114371477 -CCAGTG-GGGCTGGGATTGGAGAGGATGGAACAGGCAAATGCAAACGTGAGAAAGCGACCTTcagggccactgtcctggacgcatggaccgagcgtc--acccgggccc--tgcccagagagtcct---gcctggtctaatgctctgctgtcactggtctgaaatggtttataattttttgagaaggggccatgggtttttaatttgcactgagcccttcacattctgta i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1340334 222 + 1464242 -CCAGTG-GGGCTGGGATTGGAGAGGATGGAACAGGCAAATGCAAACGTGAGAAAGCGACCTTcagggccactgtcctggacgcatggaccgagcgtc--acccgggccc--tgcccagagagtcct---acctggtctaatgctctgctgtcactggtctgaaatggtttataattttttgagaaggggccatgggtttttaatttgcactgagcccttcacattctgta i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1062564 222 + 81552678 -CCAGTG-GGGCTGGGATTGGAGAGGATGGAACAGGCAAATGCAAACGTGAGAAAGCAGCCTTcagggccactgtcctggacgcatggactgagcgtc--acccgggccc--tgcccagagagtctt---gcctggtctaatgctctgctgtcactggtctgaaatggtttgtaattttttgagaaggggccacgggtttttaatttgcactgagcccttcgcattctgta i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1396277 222 + 108979918 -CCAGTG-GGGCTGGGATTGGAGAGGATGGAACAGGCAAATGCAAATGTAACAAAGCAACCTTcagggccactgtcctggacgcatggaccacacatc--acccaggccc--tgcccagagagtcct---gcctggtctaatgctctgctgtcactggtctgaaatggtttataattttttgggaaggggccacgggtttttaatttgcactgagcccttcacattctgta i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1368564 222 - 111193037 -CCAGTG-GGGCTGGGATTGGAGAGGATGGAACAGGCAAATGCAAATGTAACAAAGCAACCTTcagggccactgtcctggacgcatggaccacacatc--acccaggccc--tgcccagagagtcct---gcctggtctaatgctctgctgtcactggtctgaaatggtttataattttttgggaaggggccacgggtttttaatttgcactgagcccttcacattctgta i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1397119 222 + 3644372 -CCAGTG-GCGCTGGGATTGGAGAGGATGGAACAGGCAAATGCAAATGTAACAAAGCAACCTTcagggccactgtcctggacgcatggaccacacatc--acccaggccc--tgcccagagagtcct---gcctggtctaatgctctgctgtcactggtctgaaatggtttataattttttgggaaggggccacgggtttttaatttgcactgagcccttcacattctgta i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1350645 222 - 10304083 -CCAGTG-GGGCTGGGATTGGAGAGGATGGAACAGGCAAATGCAAACGTAACAAAGTGAGCTTcagggccactgtcctggacgcctggaccacacatc--accccggccc--tgcccagagagtcct---gcctggtctaatgctctgctgtcactggtctgaaatggtttataattttttgggaaggggccacgggtttttaatttgcactgagcccttcacattctgta i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1424365 222 - 107702431 -CCAGCG-GGGCTGGGATTGGAGAGGATGGAACAGGCAAATGCAAACGTAACAAAGCGACCTTcagggccactgtcctggacgcatggaccacacatc--accccggccc--tgcccagagagtcct---gcctggtctaatgctctgctgtcactggtctgaaatggtttataattttttgggaaggagccacgggtttttaatttgcactgagcccttcacattctgta i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 899134 222 - 2200435 -CCAGTG-GGGCTGGGATTGGAGAGGATGGAACAGGCAAATGCAAATGTAACAAAGCAACCTTcagggccactgtcctggacgcatggaccacacatc--ccccaggccc--tgcccagagagtcct---gcctggtctaatgctctgctgtcactggtctgaaatggtttataattttttgggaaggggccacgggtttttaatttgcactgagcccttcacattctgta i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1332508 222 - 13651311 -CCAGTG-GGGCTGGGATTGGAGAGGATGAAACAGGCAAATGCAAACGTGACAAAGCGACCTTcagggccactgtcctggacgcatggaccacacatc--acccaggccc--tgcccagagagtcct---gcctggtctagtgctctgctgtcactggtctgaaatggtttataattttttgggaaagggccacgggtttttaatttgcactgagcccttcacattctgta i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1344979 212 - 108792865 -CCAGTG-GGGCTGTGATTGGAGGGGATGGAACAGGCACAGGCAAACGTGACCAAGCGACTTTcagggccactctcccagacacgtggactgtgca---------ggccc--tgccgagagagacct---gcctggtctcatcctctcctgtcact-gtctgaaaggttttaaaa--tttcaggaaggggccatgggtttttaatttgcactgggcccttcaaattctgta i calJac3.chr14 C 0 I 551 s cebCap1.NW_016107827v1 1286588 211 + 1864846 -CCAGTG-GGGCTGTGATTGGAGGGGATGGAACAGGCACATGCAAACGTGGCCAAGCAGCATTcagggccactgtcccagacacgtggactgtgca---------ggccc--tgcccagagagccct---gcctgatctcatcctctcctgtcact-gtctgaaagg-tttaaag--ttttaggaaggggctgtgggtttttaattttcactgggcccttcaaattctgta i cebCap1.NW_016107827v1 C 0 C 0 s dasNov3.JH576208 1656624 216 + 4416731 cctaGTATAAGATGGTGTCAGAGA-GCTTCAATTAGCAAAAACATATT-----------CTGGCAAAGCCATAGGTCAgagtgcacggcctgtgcagctgggcagggtcccgtgcttggaagggaccaaagctgggcatcacgttctgttgtcgtc-atttgaagtt-cttataattttcaaacatggaaccgtggggttttattttgtgatcaaccccacaaa-actatg i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 75091 392 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1193977 1586 - 7082604 M e otoGar3.GL873658 918026 51 + 5252280 I a score=77640.000000 s hg38.chr2_KI270774v1_alt 78010 8 + 223625 gctggtTT- s panTro5.chr2A 1355607 8 + 111504155 gctggtTT- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1315768 8 + 114371477 gctggtTT- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1340556 8 + 1464242 gctggtTT- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1062786 8 + 81552678 gctggtTT- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1396499 8 + 108979918 gctggtTT- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1368786 8 - 111193037 gctggtTT- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1397341 8 + 3644372 gctggtTT- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1350867 8 - 10304083 gctggtTT- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1424587 8 - 107702431 gctggtTT- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 899356 8 - 2200435 gctggtTT- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1332730 8 - 13651311 gctggtTT- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1345742 8 - 108792865 gctggTTT- i calJac3.chr14 I 551 C 0 s cebCap1.NW_016107827v1 1286799 8 + 1864846 gctggttt- i cebCap1.NW_016107827v1 C 0 I 587 s aotNan1.NW_018513311v1 75483 8 + 287728 gctggTTT- i aotNan1.NW_018513311v1 I 392 C 0 s dasNov3.JH576208 1656840 9 + 4416731 gccaatctt i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1193977 1586 - 7082604 M e otoGar3.GL873658 918026 51 + 5252280 I a score=88834.000000 s hg38.chr2_KI270774v1_alt 78018 14 + 223625 GCAAGCCGCATTGG s panTro5.chr2A 1355615 14 + 111504155 GCAAGCCGCGTTGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1315776 14 + 114371477 GCAAGCCGCGTTGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1340564 14 + 1464242 GCAAGCCGCATTGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1062794 14 + 81552678 GCAAGCTGCATTGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1396507 14 + 108979918 GCAAGTCGCATTGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1368794 14 - 111193037 GCAAGTCGCATTGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1397349 14 + 3644372 GCAAGTCGCATTGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1350875 14 - 10304083 GCAAGTCGCATTGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1424595 14 - 107702431 GCAAGCCGCATTGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 899364 14 - 2200435 GCAAGTCATATTGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1332738 14 - 13651311 GCAAGCCGCATTGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1345750 14 - 108792865 TCAAGCCAAGTTAC i calJac3.chr14 C 0 C 0 s aotNan1.NW_018513311v1 75491 14 + 287728 TCAAGCCGAGTTGC i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1656849 14 + 4416731 gCAACTGGTGTTCC i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1193977 1586 - 7082604 M e cebCap1.NW_016107827v1 1286807 587 + 1864846 I e otoGar3.GL873658 918026 51 + 5252280 I a score=540075.000000 s hg38.chr2_KI270774v1_alt 78032 68 + 223625 ---ATGGGCC--------ATGAGAGTGTTGAGATGCGGTTAGATTTGCAGGAGC-----------GGAACTCAGGATGTGCCCCCACGTG s panTro5.chr2A 1355629 68 + 111504155 ---ATGGGCC--------ATGAGAGTGTTGAGATGCGGTTAGATTTGCAGGAGC-----------GGAACTCAGGATGTGCCCCCACCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1315790 68 + 114371477 ---ATGGGCC--------ATGAGAGTGTTGAGATGCGGTTAGATTTGCAGGAGC-----------GGAACTCAGGATGTGCCCCCACCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1340578 68 + 1464242 ---ATGGGCC--------ATGAGAGTGTTGAGATGCGGTTAGATTTGCAGGAGC-----------AGAACTCAGGATGTGCCCCCACCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1062808 68 + 81552678 ---ATGGGCC--------GTGAGAGTGTTGAGATGCGGTTAGATGTGCAGGAGC-----------GGAACTCAGGATGTGCCCCCACCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1396521 67 + 108979918 ---ATGGGCC--------GTGAGAGTGTTGAGATGCGGTTAGATTTGCAGGAG------------GGAACTCAGGGCACGCACCCACCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1368808 67 - 111193037 ---ATGGGCC--------GTGAGAGTGTTGAGATGCGGTTAGATTTGCAGGAG------------GGAACTCAGGGCACGCACCCACCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1397363 67 + 3644372 ---ATGGGCC--------GTGAGAGTGTTGAGATGCGGTTAGATTTGCAGGAG------------GGAACTCAGGGCACGCACCCACCTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1350889 67 - 10304083 ---ATGGGCC--------GTGAGAATGTTGAGATGCGGTTAGATTTGCAGGAG------------GGAACTCAGGACACGCACCCACCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1424609 67 - 107702431 ---ATGGGCT--------GTGAGAGTGTTGAGATGCGGTTAGATTTGCAGGAG------------GGAACTCAGGACACGCACCCACCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 899378 67 - 2200435 ---ATGGGCC--------GTGAGAATATTGAGATGTGGTTAGATTTGCAAGAG------------GGAACTCAGGACACGCACCCACCTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1332752 67 - 13651311 ---ATGGGCC--------GTGAGAGTGTTGAGATGCAGTTAGATTTGCAGGAG------------GGAACTCACGACACGCACCCACCTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1345764 68 - 108792865 ---ATGGGCT--------GTGAAAGTGTTGAGATGTGGTTAGATTTGTGGGAGT-----------GAAGCTCAGGACATGCGCCCACCCT i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1287394 68 + 1864846 ---ATGGGCT--------GTGAAAGTGTTGAGATGCAGTTAGATTTGTGGGAGT-----------GGAGCTCAGGACACGCACCTACCCC i cebCap1.NW_016107827v1 I 587 C 0 s aotNan1.NW_018513311v1 75505 68 + 287728 ---ATGGGCT--------GTGAAAGTGTTGAGATTCGGTTAGATTTGCGGGCGC-----------GGAGCTCAGGACATGCGCCTACCCC i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1656863 90 + 4416731 ATTAAGGACCGTAAGTATGTAAGTATGTTAAGATGTGATTGGAACTGCTCAGGCATGGTTTAGAAAGAACGCAAGGTTTGAAGTTTGGTG i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1193977 1586 - 7082604 M e otoGar3.GL873658 918026 51 + 5252280 I a score=1312070.000000 s hg38.chr2_KI270774v1_alt 78100 152 + 223625 -----------------ATTCCAG--------GCTCCTAGTCACCGCGC---AGGGCCTCTTCTGACCCTGAGGCTTCCGC-TTCCCTGCACACC-ATATGTTGGATTTTCC------TTCATAATTTATAGCTTTAGTTGAACAAGAGTTTTCTAGGATG---AAAAAA--AA--TTGCAG---TTTTTTCTTTGAA s panTro5.chr2A 1355697 156 + 111504155 -----------------ATTCCAG--------GCTCCTAGTCACCGCGC---AGGGCCTCTTCTGACCCTGAGGCTTCCGC-TTCCCTGCACACC-ATATGTTGGATTTTCC------TTCATAATTTATAGCTTTAGTTGAACAAGAGTTTTCTAGGATG---AAAAAA--AAAATTGCAGAG-TTTTTTCTTTGAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1315858 156 + 114371477 -----------------ATTCCAG--------GCTCCTAGTCACCGCGC---AGGGCCTCTTCTGACCCTGAGGCTTCCGC-TTCCCTGCACACC-ATATGTTGGATGTTCC------TTCATAATTTATAGCTTTAGTTGAACAAGAGTTTTCTAGGATG---AAAAAA--AAAATTGCAGAG-TTTTTTCTTTGAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1340646 152 + 1464242 -----------------ACTCCAG--------GCTCCTAGTCACCACGC---AGGGCCTCTCCTGACCCTGAGGCTTCCCC-TTCCCTGCACACC-ATATGTTGGATTTTCC------TTCATAATTTATAGCTTTAGTTGAACAAGAGTTTTCTAGGATG---AAAAAA--AA-ATTGCAG----TTTTTCTTTGAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1062876 155 + 81552678 -----------------ACTCCAG--------GCTCCTAGTCGCCGCGC---AGGGCCTCTCCTGACCCTGAGGCTCCCCT-TTCCCCGCACCCC-ATATGTCGGATTTTCC------TTCATAGTTTATAGCTTTAGTTGAACAAGAGTTTTCTAGGATG---AAAAAA--AA-ATTGCAGAG-TTTTTTCTTTGAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1396588 156 + 108979918 -----------------ACTCCAG--------GCTCTTAGTCACCACGC---AGGACCTCTCCTGACCCTGAGGCTTCCCC-TTCCTCGCACACC-ATATGTTGAATTTTCC------TTCATAATTCACAGCTTTAGTTGAACAAGAGTTTTCTAGGATG---AAAAAAA-AA--TTGCAGAGTTTTTTAATTTGAA i rheMac8.chr13 C 0 I 4 s macFas5.chr13 1368875 157 - 111193037 -----------------ACTCCAG--------GCTCTTAGTCACCACGC---AGGACCTCTCCTGACCCTGAGGCTTCCCC-TTCCTCGCACACC-ATATGTTGAATTTTCC------TTCATAATTCACAGCTTTAGTTGAACAAGAGTTTTCTAGGATG---AAAAAAAAAA--TTGCAGAGTTTTTTAATTTGAA i macFas5.chr13 C 0 I 4 s macNem1.NW_012011978v1 1397430 157 + 3644372 -----------------ACTCCAG--------GCTCTTAGTCACCACGC---AGGGCCTCTCCTGACCCTGAGGCTTCCCC-TTCCTCGCACACC-ATATGTTGAATTTTCC------TTCATAATTCACAGCTTTAGTTGAACAAGAGTTTTCTAGGATG---AAAAAAATAA--TTGCAGAGTTTTTTAATTTGAA i macNem1.NW_012011978v1 C 0 I 4 s cerAty1.NW_012000820v1 1350956 155 - 10304083 -----------------ACTCCAG--------GCTCTTAGTCACCACGC---AGGGCCTCTCCTGACCCTGAGGCTTCCCC-TTCCTTGCACACC-ACATGTTGGATTTTCC------TTCATAATTCACAGCTTTAGTTGAACAAGAGTTTTCTAGGATG---AAAAAA--AA--TTGCAGAGTTTTTTTATTTGAA i cerAty1.NW_012000820v1 C 0 I 4 s chlSab2.chr14 1424676 158 - 107702431 -----------------ACTCCAG--------GCTCTTAGTCACCACGC---AGGGCCTCTCCTGACCCTGAGGCCTCCCT-TTCCTCGCACACC-GTATGTTGGATTTTCC------TTCATAATTCACAGCTTTAGTTGAACAAGAGTTTTCTAGGATGAAAAAAAAA--AA--TTGCAGAGTTTTTTTATTTGCA i chlSab2.chr14 C 0 I 4 s manLeu1.NW_012103754v1 899445 155 - 2200435 -----------------ACTCCAG--------GCTCTTAGTCACCACGC---AGGGCCTCTCCTGACCCTGAGGCTTCCCC-TTCCTTGCACACC-ATGTGTTGGATTTTCC------TTCATAATTCACAGCTTTAGTTGAACAAGAGTTTTCTAGGATG---AAAAAA--AA--TTGCAGAGTTTTTTTATTTGAA i manLeu1.NW_012103754v1 C 0 I 4 s colAng1.NW_012118821v1 1332819 155 - 13651311 -----------------ACTCCAG--------GCTCTTAGTCACCACGC---AGGGCCTCTCCTGACCCTGAGGCTTCCTC-TTCCTCGCACACC-ATATGTCGGATTTTCC------TTCATAATTCACAGCTTTAGTTAAACAAGAGTTTTCTAGGATG---AAAAAA--AA--TTGCAGAGTTTTTTTGTCTGAA i colAng1.NW_012118821v1 C 0 I 4 s calJac3.chr14 1345832 149 - 108792865 -----------------ACTCCAG--------GCTCCCAGTCACCACAC---AGGGTCTGCCCTGACCCTGAGGCTCCCCC-TTCCCTGAACACC---ATGTCAGATTCTCC------TTCATAATTAACGTCTTCAGTTGAACAACAATTTTCTAGGAT----AAAACA--AA---TGCTGTA--TTTTTCTTTGAG i calJac3.chr14 C 0 I 4 s saiBol1.JH378218 1195575 149 - 7082604 -----------------ACTCCAG--------GGTCCCAGTCACCACAC---AGGGCCTGTCCTGACCCTGAGGCCCGCTC-TTCCCTGCACACC---ATGTCAGATCCTCC------TTCATAATTAACGTCTTTAGTTGAACAAGAATTTTCTAGGAC----AAAAAA--AA---TGCAGTA--TTTTTCTTTGAG i saiBol1.JH378218 M 1586 I 4 s cebCap1.NW_016107827v1 1287462 150 + 1864846 -----------------AGTCCAG--------GCTCCGAGTCACCACAC---AGGGCCTGTCCTGACCCTGAGGCCCCCCCATTCCCTGCACACC---ATGTCAGATTCGCC------TTCATAATTAGCGTCTTTAGTTGAACAAGAATTTTCTAGTAC----AAAAAA--AA---TGCAGTA--TTTTTCTTTGAG i cebCap1.NW_016107827v1 C 0 I 4 s aotNan1.NW_018513311v1 75573 150 + 287728 -----------------ACTGCAG--------GCTCCCAGTCACCACAC---AGGGCCTGTCCTGACCCTGAGGCTCCCAC-TTCCCTGCACACC---ATGTCAGATTCTCC------TTCAAAATTAACATCTTTAGTTGAACAAGAATTTTCTAGGACA---AAAAAA--AA---TGCAGTA--TTTTTCTTTGAG i aotNan1.NW_018513311v1 C 0 I 777 s dasNov3.JH576208 1656953 187 + 4416731 GATGGATATGGCTCATAAATTCAGTCAGCAATGCCTTCTTCCACAACACAGTAGTAATTGCCCTGAGTCT--GGCATATCC-TTTGCTGTAAACTTGTTTGTTCTTTTTCCCTCCTGTTTCACAATTGAAATCTTTAGTTGAGAAAGATTTTTCTAAGACA---AAACAA--AAACCTGCAGGT-TTTTTTGTTTA-- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e otoGar3.GL873658 918026 51 + 5252280 I a score=343805.000000 s hg38.chr2_KI270774v1_alt 78252 35 + 223625 ----------------TTTAAATGTCTTACTACTTTTCCTCCATTGCCTGT s panTro5.chr2A 1355853 35 + 111504155 ----------------TTTAAATGTCTTATTACTTTTCCTCCATTGCCTGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1316014 35 + 114371477 ----------------TTTAAATGTCTTATTACTTTTCCTCCATTGCCTGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1340798 35 + 1464242 ----------------TTTAAATGTCTTACTACTTTTCCTCCATTGCCTGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1063031 35 + 81552678 ----------------TTTAAATGTCTTATTACTTTTCCTCCATTGTCTGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1396748 35 + 108979918 ----------------TTTAAATGTCTTACTACTTTTCCTCCATTGCCGGT i rheMac8.chr13 I 4 C 0 s macFas5.chr13 1369036 35 - 111193037 ----------------TTTAAATGTCTTACTACTTTTCCTCCATTGCCTGT i macFas5.chr13 I 4 C 0 s macNem1.NW_012011978v1 1397591 35 + 3644372 ----------------TTTAAATGTCTTACTACTTTTCCTCCATTGCCTGT i macNem1.NW_012011978v1 I 4 C 0 s cerAty1.NW_012000820v1 1351115 35 - 10304083 ----------------TTTAAATGTCTTACTACTTTTCCTCCATTGCCTGT i cerAty1.NW_012000820v1 I 4 C 0 s chlSab2.chr14 1424838 35 - 107702431 ----------------TTTAAATGTCTTACTACTTTTCCTCCATTGCCTGT i chlSab2.chr14 I 4 C 0 s manLeu1.NW_012103754v1 899604 35 - 2200435 ----------------TTTAAATGTCTTACTACTTTGCCTCCATTGCCTGT i manLeu1.NW_012103754v1 I 4 C 0 s colAng1.NW_012118821v1 1332978 35 - 13651311 ----------------TTTAAATGTCTTATTACTTCTCCTCCATTGCCTGT i colAng1.NW_012118821v1 I 4 C 0 s calJac3.chr14 1345985 35 - 108792865 ----------------TTTAAACGTCTTATGACTTTTCCCCCAGTGCCTGT i calJac3.chr14 I 4 C 0 s saiBol1.JH378218 1195728 35 - 7082604 ----------------TTTAAATGTCTTACGACTTTTCCCCCAGCGCCAGT i saiBol1.JH378218 I 4 C 0 s cebCap1.NW_016107827v1 1287616 35 + 1864846 ----------------TTTAAACATTTTATGACTTTCCCCCCAGTGCCTGT i cebCap1.NW_016107827v1 I 4 C 0 s aotNan1.NW_018513311v1 76500 35 + 287728 ----------------TTTAAAGGTCTTATGACTTTCCCCCCAGTGCCTGT i aotNan1.NW_018513311v1 I 777 C 0 s dasNov3.JH576208 1657140 50 + 4416731 TTTGTTTGTTGAGTACTCTTAATATC-TACTTGTTTTCCTTCACTGACTGT i dasNov3.JH576208 C 0 I 94 e mm10.chr12 89962715 21660 - 120129022 I e otoGar3.GL873658 918026 51 + 5252280 I a score=490830.000000 s hg38.chr2_KI270774v1_alt 78287 80 + 223625 CAGTGCAAAACAAAC----A-----CAAACAAAGCATCAGCCACTTCTCTTTCTCTAAATCTCCAGGAAGCCCTGCCTCTCCAGGCAGC s panTro5.chr2A 1355888 80 + 111504155 CGGTGCAAAACAAAC----A-----CGAACAAAGCATCAGCCACTTCTCTTTCTCTAAATCTCCAGGAAGCCCTGCCTCTCCGGGCAGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1316049 80 + 114371477 CAGTGCAAAACAAAC----A-----CGAACAAAGCATCAGCCACTTCTCTTTCTCTAAATCTCCAGGAAGCCCTGCCTCTCTGGGCAGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1340833 80 + 1464242 CAGTGCAAAACAAAC----A-----CAAACAAAGCATCAGCCACTTCTCTTTCTCTAAATCTCCTGGAAGCCCTGCCTCTCCGGGCAGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1063066 79 + 81552678 TGGTGCAAAACAAAC----A------AAAGAAAGCATCAGCTGCTTCTCTTTCTCTAAATCTCCAGGAAGCCCTGCCTCTCCAGGCAGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1396783 62 + 108979918 TGGTGCAAAACAAAC----A-----CAAATGAAGCCTCAGCCGCTTCTCTTTCTCTAAATCTCCA------------------GGCAGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1369071 62 - 111193037 TGGTGCAAAACAAAC----A-----CAAATGAAGCCTCAGCCGCTTCTCTTTCTCTAAATCTCCA------------------GGCAGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1397626 62 + 3644372 TGGTGCAAAACAAAC----A-----CAAATGAAGCCTCAGCCGCTTCTCTTTCTCTAAATCTCCA------------------GGCAGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1351150 62 - 10304083 TGGTGCAAAACAAAC----A-----CAAACGAAGCCTCAGCCGCTTCTCTTTCTCTAAATCTCCA------------------GGCAGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1424873 66 - 107702431 TGGTGCAAAACAAACACAAA-----CAAACAAAGCCTCAGCCGCTTCTCTTTCTCTAAATCTCCA------------------GGCAGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 899639 62 - 2200435 TGGTGCAAAACAAAC----A-----CAAACGAAGCCTCAGCCGCTTCTCTTTCTCTAAATCTCCA------------------GGCAGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1333013 66 - 13651311 TGGTGCAAAACAAACACAAA-----CAAACGTAGCCTCAGCCACTTCTCTTTCTCTAAATCTCCA------------------GGCAGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1346020 82 - 108792865 TGGTGTGAAACAAAC----AGGAACAAAACAAAGTTTCAGTCACTCCTCTT--TCTCCAGTTGCAGGAAGCCCCCCTTCTCCAGGCAG- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1195763 85 - 7082604 TGGTGCAAAACGAAC----AGGAACAAAACAAAGCATCAGCTGCTCCCCTTTCTCTCCAGCTCCAGGAGGCCCTGCCTCTCCAGGCGGT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1287651 85 + 1864846 TGGTGCAAAACAAGC----AGGAACAAAAGAAAGCGTCAGCCACTCCTCTTTCTCTCCAGCTCCAGGAGGCCCTGCCTCTCCAGGCCGC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 76535 85 + 287728 TGGTGTAAAACGAAC----AGGAACAAAACAGAGCGTCAGCCGCTCCTCTCTGTCCCCAGCTCCAGGAGGCCCTTCCTCTCCAGGCAGC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89962715 21660 - 120129022 I e otoGar3.GL873658 918026 51 + 5252280 I e dasNov3.JH576208 1657190 94 + 4416731 I a score=3016998.000000 s hg38.chr2_KI270774v1_alt 78367 359 + 223625 TCCACTCCCAGGTGTGCCCTTGG-AAGGGGTGCAG-TTTGCTGCACAGAAGCTCTGGCATAACTCAGAATAAGAAACTCATTTCCCCAACCAGCCAGCCACACTGTAATCCAAGCAGAACA-----------GCTCTGACACAAAGATTTCCCATGTGACCATTCAAGAT-----TTTATACACACTAATATTCTTCCTTTAGTTTAAAGAATCAAGTT-----TGCTTTGGATTAT-TAAAAAGCTCTGCACTTAAAGGTCATGGGGAAA-CTTAAATGGCA------AAAGGAAGCAAGGC----CCAAGTTTCTTT------TATGTCTAACATAAAAAA-TTGT-------TAAATAATGC--T-ACGTA--TTTTTTGATAGATTTAAGATATAAATTTCCTAA-TTTT s panTro5.chr2A 1355968 360 + 111504155 TCCACTCCCAGGTGTGCCCTTGG-AAGGGGTGCAG-TTTGCTGCACAGAAGCTCTGGCATAACTCAGAATAAGAAACTCATTTCCCCAACCAGCCAGCCACACTGTAATCCAAGCAGAACA-----------GCTCTGACACAAAGATTTCCCATGTGACCATTTAAGAT-----TTTATACACTCTAATATTCTTCCTTTAGTTTAAAGAATAAAGTT-----TGCTTTGGATTAT-TAAAAAGTCCTGCTTTTAAAGGTCATGGGGAAAACTTAAATGGCA------AAATGAAGCAAGGC----CCAAGTTTCTTT------TATGTCTAACATAAAAAA-TTGT-------TAAATAATGC--T-ACGTA--TTCTTTGATAGATTTAAGAGATAAATTTCTTAA-TTTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1316129 360 + 114371477 TCCACTCCCAGGTGTGCCCTTGG-AAGGGGTGCAG-TTTGCTGCACAGAAGCTCTGGCATAACTCAGAATAAGAAACTCATTTCCCCAACCAGCCAGCCACACTGTAATCCAAGCAGAACA-----------GCTCTGACACAAAGATTTCCCATGTGATCATTTAAGAT-----TTTATACACTCTAATATTCTTCCTTTAGTTTAAAGAATAAAGTT-----TGCTTTGGATTAT-TAAAAAGTCCTGCTTTTAAAGGTCATGGGGAAAACTTAAATGGCA------AAATGAAGCAAGGC----CCAAGTTTCTTT------TATGTCTAACATAAAAAA-TTGT-------TAAATAATGC--T-ACGTA--TTCTTTGATAGATTTAAGAGATAAATTTCTTAA-TTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1340913 360 + 1464242 TCCACTCCCAGGTGTGCCCTTGG-AAGGGGTGTAG-TTTGCTGCACAGAAGCTCTGGCATAACTCAGAATAAGAAACTCATTTCCCCAACCAGCCAGCCACACTGTAATCCAAGCAGAACA-----------GCTCTGACACAAAGATTTCCCATGTGACCATTGAAGAT-----TTTATACACACTAATATTCTTCCTTTAGTTTAAAGAATCAAGTT-----TGCTTTGGATTAT-TAAAAAGCTCTGCACTTAAAGGTCATGGGGAAAACTTAAATGGCA------AAAGGAAGCAAGGC----CCAAGTTTCTTT------TATGTCTAACATAAAAAA-TTGT-------TAAATAATGC--T-ACGTA--TTTTTTGATAGATTTAAGAGATAAATTTCCTAA-TTTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1063145 364 + 81552678 TCCACTCCCAGGTGTGCCCTTGG-AAGGGGTGCAG-TTTGCTGCACAGAAGCTCTGGCATAACCCAGAATAAAACACTCATTTCCCCAACCAGCCAGCCACACTGTAATCCAAGCAGAACA-----------GCTCTGACACAAACATTTCCCATGTGACCATTTAAGAT-----TTTATACATGCTAATATTCTTCCTTTAGTTTAAAGAAAAAAGTT-----TGCTTTGGATTAT-TAAAAAGTTCTGCATTTAAAGGTCATGGGGAAAACTTAAATAGCAAAA-TGAAATGAAGCAAGGC----CCAAGTTTCTTT------TATGTCTGACATAAAAAA-TTGT-------TAAATAATGC--T-ATGCA--TT-TTTGATAGATTTAAGAGATAAATTTCCTAA-TTTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1396845 371 + 108979918 TCCA-TCCCGGGTGTGCCCTTGG-AAGAGGCGCAG-TTTGCTGCACAGAAGCTCTGGCATAACTCAGAATAAAAAACTCACTTCCCCAACCAGCCAGCCACACTCTAATCCAAGCAGAACAGCTTTAGGGATGCTCTGACACAAACATTTCCCGTGTGACCATTTAAGAT-----TTTATACACGCTAATAGTCTTCC-----TTTAAAGAATAAAGTT-----TGCCTTGGATTAT-TAAACAGTTCTGCATTTAAAGGTCACGGGGAAAACTTAAATGGCAAAA-TGAAATGAAGCAAGGC----CAAAGTGTCTTT------TATGTCTAACATAAAAAAATTGG-------TAAATAATGC--T-ATGTA---TTTTTGATAGATTTAAGAGCTAAAGTTCCTAATTTTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1369133 371 - 111193037 TCCA-TCCCGGGTGTGCCCTTGG-AAGAGGCGCAG-TTTGCTGCACAGAAGCTCTGGCATAACTCAGAATAAAAAACTCACTTCCCCAACCAGCCAGCCACACTCTAATCCAAGCAGAACAGCTTTAGGGATGCTCTGACACAAACATTTCCCGTGTGACCATTTAAGAT-----TTTATACACGCTAATAGTCTTCC-----TTTAAAGAATAAAGTT-----TGCCTTGGATTAT-TAAACAGTTCTGCATTTAAAGGTCGCGGGGAAAACTTAAATGGCAAAA-TGAAATGAAGCAAGGC----CAAAGTGTCTTT------TATGTCTAACATAAAAAAATTGG-------TAAATAATGC--T-ATGTA---TTTTTGATAGATTTAAGAGCTAAAGTTCCTAATTTTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1397688 371 + 3644372 TCCA-TCCCGGGTGTGCCCTTGG-AAGAGGCGCAG-TTTGCTGCACAGAAGCTCTGGCATAACTCAGAATAAAAAACTCATTTCCCCAACCAGCCAGCCACACTCTAATCCAAGCAGAACAGCTTTAGGGATGCTCTGACACAAACATTTCCCATGTGACCATTTAAGAT-----TTTATACACGCTAATAGTCTTCC-----TTTAAAGAATAAAGTT-----TGCCTTGGATTAT-TAAACAGTTCTGCATTTAAAGGTCGCGGGGAAAACTTAAATGGCAAAA-TGAAATGAAACAAGGC----CAAAGTGTCTTT------TATGTCTAACATAAAAAAATTGG-------TAAATAATGC--T-ATGTA---TTTTTGATAGATTTAAGAGCTAAAGTTCCTAATTTTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1351212 374 - 10304083 TCCA-TCCCGGGTGTGCCTTTGG-AAGAGGCGCAG-TTTGCTGCACAGAAGCTCTGGCATAACTCAGAATAAAAAACTCATTTCCCCAACCAGCCAGCCACACTCTAATCCAAGCAGAACAGCTTTAGGGATGCTCTGACACAAACATTTCCCGTGTGACCATTTAAGAT-----TTTATACACGCTAATAGTCTTCC-----TTTAAAGAATAAAGTT-----TGCCTTGGATTAT-TAAACAGTTCTGCATTTAAAGGTCATGGGGAAAACTTAAATGGCAAAC-TGAAATGAAGCCAGGC----CAAAGTGTCTTT------TATGTCTAACATAAAAAAATTGG-------TAAATAATGC--T-TTTTGTACTTTTTGATAGATTTAAGAGCTAAAGCTCCTAATTTTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1424939 373 - 107702431 TCCACTCCTGGGTGTGCCCTTGG-AAGAGGTGCAG-TTTGCTGCACAGAAGCTCTGGCATAACTCGGAATAAAAAACTCATTTCCCCAACCAGCCAGCCACACTCTAATCCAAGCAGAACGGCTTTAGGGATGCTCTGGCACAAACATTTCCCGTGTGACCATTTAAGAT-----TTTATACATGTTAATAGTCTTCC-----TTTAAAGAATAAAGTT-----TGCCTTGGATTAT-TAAACAGTTCTGCATTTAAAGGTCATGGGGAAAACTTAAATGGCAAAA-TGAAATGAAGCCAGGC----CAAAGTGTCTTT------TATGTCTAACATAAAAAAATTGG-------TAAATAATGC--T-ATGTA--TTTTTTGATAGATTTAAGAGCTAAAGTTCCTAATTTTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 899701 374 - 2200435 TCCA-TCCCGGGTGTGCCCTTGG-AAGAGGTGCAG-TTTGCTGCACAGAAGCTCTGGCATAACTCAGAATAAAAAACTCATTTCCCCAACCAGCCAGCCACACTCTAATCCAAGCAGAACAGCTTTAGGGATGCTCTGACACAAACATTTCCCGTGTGACCATTTAAGAT-----TTTATACACGCTAATAGTCTTCC-----TTTAAAGAATAAAGTT-----TGCCTTGGATTAT-TAAACAGTTCTGCATTTAAAGGTCATGGGGAAAACTTAAATGGCAAAC-TGAAATGAAGCCAGGC----CAAAGTGTCTTT------TATGTCTAACATAAAAAAATTGG-------TAAATAATGCTTT-TTGTA--CTTTTTGATAGATTTAAGAGCTAAAGCTCCTAATTTTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1333079 371 - 13651311 TCCACTCCTGGGTGTGCCCTTGG-AAGAGGCACAG-TTTGCTGCACAGAAGCTCTGGCATAACTCAGAATAAAAAACTCATTTCCCCAACCAGCCAGCCACACTCTAATCCAAGCAGAACAGCTTTAGGGATGCTCTG--ACAAATATTTCCTATGTGACCATTTAAGAT-----TTTATATACGCTAATAGTCTTCC-----TTTAAAGAATAAAGTT-----TGCCTTGGATTAT-TAAACAGTTCTGCATTTAAAGGTCGTGGGGAAAACTTAAATGGCAAAA-TGAAATGAAGCAAGGC----CAAAGTGTCTTT------TATGTCTAACGTAAAAAAGTTGG-------TAAATAATGC--T-ATGTA--TTTTTTGATAGATTTAAGAGCTAAAGTTCCTAATTTTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1346102 367 - 108792865 ----CCTGTGCCTGTGCCCTTGG-ACAGGGTGCAG-G-TGCCGCACAG-TGCTCCAGCGTAACTCGGATTAAGAAACTCG-TTCCCCAACCACCCAGGCACACTGTCACCCAAGCAGGGCAGCACTGGGGACACTCAA--CCAGACCCTTCCCATGTGACCATTTAAGAT-----TTTATACACAGTCATATTCCTCCTCTACTTTAAAGAATAACATT-----TGCTTTGGATTAT-TAAAAAGTTCTGCATTTAAAGGTCATGGGAAAAACTTAAATGGCAAAA-TGAAATGAAGCAAGGG----CAAAGCTTCTTT------TATGTCTAACATAAAAAG-TTTT-------TAAATAATAC--T-ACATA--TTTTCTGGTAGATTTAAGAGataaattttctaatttt- i calJac3.chr14 C 0 I 1 s saiBol1.JH378218 1195848 338 - 7082604 GCCACTCCTGCCTGTGCCCTTGG-ACGGGGTGCAG-GATGCCACACAG-TGCTCCGGCATAACTCGGATTAAGAAACTCA-TTCCCCAACTACCCAGCCACACTGTCAACCACGCAGGGCAGTGCTAGGGACGCTCAA--CCAGACCCTTCCCATGTGACCATTTAAGAT-----TTTATGCACGGTAATATTCCTCCTCTGTTTTAAAGAATAACATT-----TGCTTTGGATTAT-TAAAAAGTTCTGCATTTAAAGGTCATG-----------------------------------GGT----CAAAGCTACTTT------TATGTCTGACATAAAAGG-TTTT-------TAAATAACAC--T-ACGTA--TTTTCTGGTAGATTTAAGAGataaattttctaatttt- i saiBol1.JH378218 C 0 I 1 s cebCap1.NW_016107827v1 1287736 367 + 1864846 GCCACTCCCACCCGTGCCTTTGG-ACGGGGCGCAG-GATGCCACACAG-TGCTTCGGCATAACTCGGACTTAGAATCTCA-TTCCCCAGTCACCCAGCCACACTGTCACCCAAGCAGGGCAGTGCTAGGGACGCTCAG--CCAGACCCTTCCCATGTGACCATTTAAGAT-----TTTATACACGGTAATAT---TCCTCTATTTTAAAGAATAACATT-----TGCTTTGGATTAT-TAAAAAGTTCTGCATTTAAAGGTCATGGGAAAAACTTAAATGGCAAAA-TGAAATGAAGCAAGGC----CAAAGCTGCTTT------TATGTCTAACATAAA--G-TTTT-------TAAATAATAC--T-ACATA--TTTTCTGGTAGATTTAAGAGATAAATTTTCTAATTTT- i cebCap1.NW_016107827v1 C 0 I 1 s aotNan1.NW_018513311v1 76620 371 + 287728 GCCGCTCCTGCCTGTGCCCTCGG-ACGGGGTGCAG-GATGCCGCACAG-TGCTCCGGCCTAACTCGGATTAAGAAACTCC-TTCCCCAACCACCCAGCCACACTGTCACCCAAGCAGGGCAGCGCTAGGGACGCTCGA--GCAAACCCTTCCCATGTGACCATTTAAGAT-----TTT-TACACGGTAATATTCCTCCTCTGTTTTAAAGAATAACATT-----TGCTTTGGATTAT-TACAAAGTTCTGCATTTAAAGGTCATGGGAAAAACGTAAATGGCAAAA-TGAAATGAAGCGAGGC----CAAAGCTGCTTC------TATGTCCAACAGAAAAAG-GTTT-------TAAATAATAC--T-ACGTA--TTTTCTGGTAGATTTAAGAGAGAAAttttctaatttt- i aotNan1.NW_018513311v1 C 0 I 684 s dasNov3.JH576208 1657284 403 + 4416731 TCCACCTCCATGAGTGTGATTAGTTAGCACCACAGACTTGCACCATAGAAGTACTGAAAAGAATGTAAATGATATACTAAATTCCAAAAATGCTCAACAAAACTTTAATCCATGCCCCACTCTTTTAGGAATGTTCTGATGTAAATGTTTTCTACAT-----TTCAAGATTACGCTCTATATAAGCTGATGTTCCTTCTTTC-TTAAAAGAATCAAATCATACATTTTTTGGAATATGGAAAAAGTTCTGTGTTTAGGCATTTTGAGAAAAACGCAAGTGGCAAAATTGAAATTATAAAGGGTGTGGGAAAATTGTTTCACGTAATATGTTTAGCATGAAAAA-TTTTAATAATATAGGTAATAG--TAATAAA--TGTTTTAATAGACATAAGAAATATACTTGAAAATTTCC i dasNov3.JH576208 I 94 C 0 e mm10.chr12 89962715 21660 - 120129022 I e otoGar3.GL873658 918026 51 + 5252280 I a score=159013.000000 s hg38.chr2_KI270774v1_alt 78726 31 + 223625 ATGTATAATAAAAT-AAAAAACATAA-----AAATAT s panTro5.chr2A 1356328 32 + 111504155 ATGTATAATAAAAT-AAAAAACATAAC----AAAAAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1316489 32 + 114371477 ATGTATAATAAAAT-AAAAAACATAAC----AAAAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1341273 31 + 1464242 ATGTATAATAAAAT-AAAAAACATAA-----AAAAAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1063509 32 + 81552678 ATGTATAATAAAAT-AAAAAACACAAC----AAAAAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1397216 27 + 108979918 ATGTAT-----AAT-AAAAAACATAAC----AAAAGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1369504 27 - 111193037 ATGTAT-----AAT-AAAAAACATAAC----AAAAGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1398059 27 + 3644372 ATGTAT-----AAT-AAAAAACATAAC----AAAAGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1351586 27 - 10304083 ATGTAT-----AAT-AAAAAACATACC----AAACGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1425312 27 - 107702431 ATGTAT-----AAT-AAAAAACATAAC----AAAAGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 900075 27 - 2200435 ATGTAT-----AAT-AAAAAACATAAC----AAACGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1333450 27 - 13651311 ATGTAT-----AAT-AAAAAACATAAC----AAAAGT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1346470 30 - 108792865 at-tataataaaat--aaaaaaataaC----AAAAGT i calJac3.chr14 I 1 C 0 s saiBol1.JH378218 1196187 32 - 7082604 at-tataataaaattaaaaaaCATAAC----TAAAGC i saiBol1.JH378218 I 1 C 0 s cebCap1.NW_016107827v1 1288104 35 + 1864846 AT-TATAATAAAAT-GAAAAACATAACAAAGAAAAGT i cebCap1.NW_016107827v1 I 1 C 0 s dasNov3.JH576208 1657687 32 + 4416731 ATAACCGATGAAGT-ACAAAAAGGAGA----AAATAT i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 76991 684 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e otoGar3.GL873658 918026 51 + 5252280 I a score=1057444.000000 s hg38.chr2_KI270774v1_alt 78757 126 + 223625 CTCTCCATGTGAAGTGGGTTTGAGTGTCGTTAATGAGtggtctggtttgactgtgtccccacccacatttcatcttgaattgtagctcccataatcccc--atgtcaagggagggacctggtgggagg s panTro5.chr2A 1356360 126 + 111504155 CTCTCCATGTGAAGTGGGTTTGAGTGGCGTTAATGAGtgatcttgtttgactgtgtccccacccacatttcatcttgaattgtagctcctataatcccc--atgtcatgggagggacctggtgggagg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1316521 126 + 114371477 CTCTCCATGTGAAGTGGGTTTGAGTGGCGTTAATGAGtgatctggtttgactgtatccccacccacatttcatcttgaattgtagctcctataatcccc--atgtcatgggagggacctggtgggagg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1341304 126 + 1464242 CTCTCCATGTGAAGTGGGTTTGAGTGGTGTTAATGAGtgatctggtttgactgtgtccccacccacatttcatcttgaattgtagctcccataatcccc--atgtcatgggagggacctggtgggagg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1063541 126 + 81552678 CTCTCCATGTGAAGCAGCTTTGAGTGGTGTTAATGAGtgatctggtttgactgtgtccccacccacatttcatcttgaattgcagctctcataatcccc--ttgtcatggcagggacctggtgggagg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1397243 126 + 108979918 CTCTCCATGTGAAGCGGCTTTGAGTGGCGTTAGTGAGtgatctggtttgactgtgtccccacccacatttcctcttgaattgtagctcccataatcccc--atgtcatgggagggatctggtgggagg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1369531 126 - 111193037 CTCTCCATGTGAAGCGGCTTTGAGTGGCGTTAGTGAGtgatctggtttgactgtgtccccacccacatttcctcttgaattgtagctcccataatcccc--atgtcatgggagggatctggtgggagg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1398086 126 + 3644372 CTCTCCATGTGAAGCGGCTTTGAGTGGCGTTAGTGAGtgatctggtttgactgtgtccccacccacatttcctcttgaattgtagctcccataatcccc--atgtcatgggagggatctggtgggagg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1351613 126 - 10304083 CTCTCCATGTGAAGTGGCTTTCAGTGGCGTTAATGAGtgatctggtttgactgtgtccccacccgcatttcgtcttgaattgtagctcccataatcccc--atgtcatgggagggatctggtgggagg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1425339 126 - 107702431 CTCTCCATGTGAAGCGGCTTTCAGTGGCGTTAATGAGtgatctggtttgactgtgtccccacccacatttcgtcttgaattgtagctcccataatccct--atgtcatgggagggatctggtgggagg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 900102 126 - 2200435 CTCTCCATGTGAAGTGGCTTTCAGTGGCGTTAATGAGtgatctggtttgactgtgtccccacccacatttcgtcttgaattgtagctcccataatcccc--atgtcataggagggatctggtgggagg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1333477 126 - 13651311 CTCTCCACGTGAAGCGGCTTTCAGTGGCGTTAATGAGtgatctggtttgactgtgtccccacccacattttgtcttgaattgtagctcccataatcccc--atgtcatgggagggatctggtgggagg i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1346500 128 - 108792865 GTCCCCCTGTGAAATGGCTTTGAGTGGCTTTGATGAGtgatgtggtctggctgtgtccgcacccaaattccatctggaactgtagctcacatattccccatatgtcctgggagggacctggtgggagg i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1196219 128 - 7082604 GTCCCCCTGTGAAATGGCTTTGAGTGGCATTGATGACtgatgtggtctggctgtgtcctcacccaaatttcatcttgaactgtagctcccatgttccccatatgtcatgggaggggcctggtgggagg i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1288139 128 + 1864846 GTCCCCCTGTGAAATGGCTTTGAGTGGCATTGATGAGtgatgtggtctggtggtgtcctcacccaaatttcatcttgaactgtagctcccatattcctcgtatgtcatgggagggacctggtgggagg i cebCap1.NW_016107827v1 C 0 I 580 e aotNan1.NW_018513311v1 76991 684 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e otoGar3.GL873658 918026 51 + 5252280 I e dasNov3.JH576208 1657719 0 + 4416731 C a score=102018.000000 s hg38.chr2_KI270774v1_alt 78883 14 + 223625 taattgaatcatgg s panTro5.chr2A 1356486 14 + 111504155 taattgaatcatgg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1316647 14 + 114371477 taattgaatcatgg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1341430 14 + 1464242 taattgaatcatgg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1063667 14 + 81552678 taattgaatcatgg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1397369 14 + 108979918 taattgaatcatgg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1369657 14 - 111193037 taattgaatcatgg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1398212 14 + 3644372 taattgaatcatgg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1351739 14 - 10304083 taattgaatcatgg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1425465 14 - 107702431 taattgaatcatgg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 900228 14 - 2200435 taattgaatcatgg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1333603 14 - 13651311 taattgaaccatgg i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1346628 14 - 108792865 cggttgaatgatgg i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1196347 14 - 7082604 tagttgaacgatgt i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 76991 684 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 918026 51 + 5252280 I e dasNov3.JH576208 1657719 0 + 4416731 C a score=5705.000000 s hg38.chr2_KI270774v1_alt 78897 2 + 223625 gg s panTro5.chr2A 1356500 2 + 111504155 gg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1316661 2 + 114371477 gg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1341444 2 + 1464242 gg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1063681 2 + 81552678 gg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1397383 2 + 108979918 gt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1369671 2 - 111193037 gt i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1398226 2 + 3644372 gt i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1351753 2 - 10304083 gt i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1425479 2 - 107702431 gt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 900242 2 - 2200435 gt i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1333617 2 - 13651311 gt i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1346642 2 - 108792865 ga i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 76991 684 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1196361 0 - 7082604 C e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 918026 51 + 5252280 I e dasNov3.JH576208 1657719 0 + 4416731 C a score=1258018.000000 s hg38.chr2_KI270774v1_alt 78899 282 + 223625 gtgggtttttctcatgccgttctagtgatagtgtgttctagtgatagtgtgttctagtgatagtgtgttctagtgatagtgactaagtctcatgagatctgatggttttataaagggcagttcccctgcacacattctcttgcctgccgccatgtaagaggtgactttgcctctccttagccttctgccatgattgtgaggcctccccagccatgtggaactgtgagtccattaaacctcttc--ctctaataagttacccagtctgggatatgtctttattag s panTro5.chr2A 1356502 234 + 111504155 gtgggtttttctcatgc------------------------------------------------tgttctagtgatagtgactaagtctcatgagatctgatggttttataaagggcagttcccctgcacacattctcttgcctgccgccatgtaagatgtgcctttgcctctccttagccttctgccgtgattgtgaggcctccccggccatgtggaactgtgagtccattcaacctcttc--ctctaataagttacccagtctgggatatgtctttattag i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1316663 234 + 114371477 gtgggtttttctcatgc------------------------------------------------tgttctagtgatagtgactaagtctcatgagatctgatggttttataaagggcagttcccctgcacacattctcttgcctgccgccatgtaagaggtgcctttgcctctccttagccttctgccgtgattgtgaggcctccccggccatgtggaactgtgagtccattcaacctcttc--ctctaataagttacccagtctgggatatgtctttattag i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1341446 234 + 1464242 gtgggtttttctcatgc------------------------------------------------cgttctaatgatagtgactaagtctcatgagatctgatggttttataaagggcagttcccctgcacacattctcttgcctgccgccatgtaagaggtgtctttgcttctccttagccttctgccatgattgtgaggcctccccagccatgtggaactgtgagtccattaaacctcttc--ctctaataagttacccagtctgggatatgtctttattag i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1063683 233 + 81552678 gtgggtctttcccatgc------------------------------------------------tgttctagtgatagtgactaagtcttatgagatctgatggttttataaagggcagttccgctgcacacgctctcttccctgccgccatgtaagaggtgtctttgcttctccttagccttctgccatgattgtgaggcctccccagccatgtggaactgggagtccattaaacctcttc--ctct-ataagttaccaaaactgggatatgtctttattag i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1397385 232 + 108979918 gcaggtttttcccatgc------------------------------------------------tgttctagtgacagtgactaaatctcacgagatctgatggttttataaagggcagttctcctgcacatgctctcttgcctgccgccatgtaagatgtgctttggctcctcctttgccttctgccatgattgtgaggcct-cccagccatgtgggactgtgagtccattcaacctgttc--ctct-ataagttacccagtctgggatatgtctttattag i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1369673 234 - 111193037 gcaggtttttcccatgc------------------------------------------------tgttctagtgacagtgactaaatctcacgagatctgatggttttataaagggcagttctcctgcacatgctctcttgcctgccgccatgtaagatgtgctttggctcctcctttgccttctgccatgattgtgaggcct-cccagccatgtgggactgtgagtccattcaacctgttcctctct-gtaagttacccagtctgggatatgtctttattag i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1398228 234 + 3644372 gcaggtttttcccatgc------------------------------------------------tgttctagtgacagtgactaaatctcacgagatctgatggttttataaagggcagttctcctgcacatgctctcttgcctgccgccatgtaagatgtgctttggctcctcctttgccttctgccatgattgtgaggcct-cccagccatgtgggactgtgagtccattcaacccgttcctctct-ataagttacccagtctgggatatgtctttattag i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1351755 232 - 10304083 gcaggtttttcccatgc------------------------------------------------tgttctagtgacagtgactaaatctcatgagatctgatggttttataaagggcagttctcctacacatgctctcttgcctgccgccatgtaagatgtgccttggctcctcctttgccttctgccatgattgtgaggcct-cccagccatgtgggactgtgagtccattcaacttcttc--ctct-ataagttacccagtctgggatatgtctttattag i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1425481 232 - 107702431 gcaggtttttcccatgc------------------------------------------------tgttctagtgacagtgactaaatctcatgagatctaatggttttataaagggcagttctcctgcacacgctctcttgcctgccgccatataagatgtgccttggctcctcctttgccttctgccatgattgtgaggcct-cccagccatgtgggactgtgagtccattcaacctgttc--ctct-ataagttacccagtctgggatatgtctttattag i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 900244 232 - 2200435 gcaggtttttcccatgc------------------------------------------------tgttctagtgacggtgactaaatctcatgagatctgatggttttataaagggcagttctcctacacacgctctcttgcctgccgccatgtaagatgtgccttggctcctcctttgccttctgccatgattgtgaggcct-ccgagccatgtgggactgtgagtccattcaacttcttc--ctct-ataagttacccagtctgggatatgtctttattag i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1333619 233 - 13651311 gcgtgtttttcccatgc------------------------------------------------tgttctagtgacagtgactaaatctcatgagatctgatggttttataaagggcagttctcctgcacacgctctcttgcctgccgccacgtgagatgtgccttggctcctcctttgccttctgccgagattgtgaggcctccccagccatgtgggactgtgagtccattcaacctcttc--ctct-gtaagttacccagtctgggatatgtctttattag i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 76991 684 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1196361 0 - 7082604 C e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 918026 51 + 5252280 I e dasNov3.JH576208 1657719 0 + 4416731 C e calJac3.chr14 1346644 0 - 108792865 C a score=3933213.000000 s hg38.chr2_KI270774v1_alt 79181 658 + 223625 cagcgtgaaaacagact----------aatacaATGAGGAAGTAAGAAGAGGCTGAA-TTCCTACATAATCCAGATGCTTC-------------CTGTGAGCTGCCACTAAGCTCT---GCTCTGCTGGAAG---------CTCACGTGGGAA-------------GAGTCTGCCTGGCACAGCTTCCCCAGGCCCCATCTCCCCTTGGAAAGGGC---AGACACCAAGGC--TGGGGAGGAGGCAGAGGGGA--------------------------------------------------------------------------------------------------GCCACATGGCC-ACAGAGGCCAGCAGGGGTTCCCCAGGACGGAGGAGCTAAAAAGTAATCT---GGGAAACTCAAACCTGCCCCAAGAATTCTGGGAG-TTGAAGGGCACAGACACCAGACCAAGAGCAAAC---CACATCCCAAGAAGCGTTTACCCACTGGGGCCAGGG-----CAGGAGGCCTGGGTCTCAGGACAGCTCCCAGCTCTGAGATTGGC----------------------------------------------AGAAGTATAGACGTCCCGCAGTTCAC-AGCAATGTCTTCCGCAGCTGAGAGGGTCTCCGTG--------CATGTGTCAGCCATCTGCAAATCTGACAGTGCTCGAATATTTTTTGATTCAGCAGTGGAGTAACTTTACATTCTAAGGGAGCCCATTGAC-TT-----GTA-----GAAAGGACAGGTGTGGTTATGTTCTGGCACCACATAAACA-TGGAGGGAAATTGCAGAATGAGCCGCTGTTCTTTCCCTCAGATGCGTGAGGATGGGC s panTro5.chr2A 1356736 692 + 111504155 cagcgtgaaaacagact----------aatacaATGAGGAAGTAAGAAGAGGCTGAA-TTCCTACATAATCCAGATGCTTC-------------CTGTGAGCTGCCACTAAGCTCT---GCTCTGCTGGAAG---------CTCACGTGGGAA-------------GAGTCTGCCTGGCACAGCTTCCCCAGGCCCCATCTCCCCTTAGAAAGGGC---AGACACCAAGGC--TGGGGAGGAGGCAGAGGGGAAGCCA-----------GCCAGTGTCCTG------------------------TAGGT-----------------------------GAAGCCCTCTGAGCCACATGGCC-ACAGAGGCCAGCAGGGGTTCCCCAGGAAGGAGGAGCTAAAAAGTAATCT---GGGAAACTCAAACCTGCCCCAAGAATTCTGGGAG-TTGAAGGGCACAGACACTAGACCAAGAGCAAAC---CACATCCCAAGAAGCCTTTACCAACTGGGGCCAGGG-----CAGGAAGCCTGGGTCTCAGGACAGCTCCCGGCTCTGAGATTGGC----------------------------------------------AGAAGTATAGACGTCCCGCAGTTCAC-AGCAATGTCTTCCGCAGCTGAGAGGGTCTCCGTG--------CGTGTGTCAGCCATCTGCAAATCTGACAGTGCTCGAATATTTTTTGATTCAGCAGTGGAGTAACTTTACATTCTAAGGGAGCCCATTGAC-TT-----GTA-----GAAAGGACAGGTGTGGTTATGTTCTAGCACCACATAAACA-TGGAGGGAAATTGCAGAATGAGCCGCTGTTCTTTCCCTCAGATGCGTGAGGATGGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1316897 689 + 114371477 cagcgtgaaaacagact----------aatacaATGAGGAAGTAAGAAGAGGCTGAA-TTCCTACATAATCCAGATGCTTC-------------CTGTGAGCTGCCACTAAGCTCT---GCTCTGCTGGAAG---------CTCACGTGGGAA-------------GAGTCTGCCTGGCACAGCTTCCCCAGGCCCCATCTCCCCTTAGAAAGGGC---AGACACCAAGGC--TGGGGAGGAGGCAGAGGGGAAGCCA-----------GCCAGTGTCCTG------------------------TAGGT-----------------------------GAAGCCCTCTGAGCCACATGGCC-ACAGAGGCCAGCAGGGGTTCCCCAGGAAGGAGGAGCTAAAAAGTAATCT---GGGAAACTCAAACCTGCCCCAAGAATTCTGGGAG-TTGAAGGGTACAGACACTAGACCAAGAGCAAAC---CACATCCCAAGAAGCCTTTACCAACTGGGGCCAGGG-----CAGGAAGCCTGGGTCTCAGGACAGCTCCCGGCTCTGAGATTGGC-------------------------------------------------AGTATAGACGTCCTGCAGTTCAC-AGCAATGTCTTCCGCAGCTGAGAGGGTCTCCGTG--------CGTGTGTCAGCCATCTGCAAATCTGACAGTGCTCGAATATTTTTTGATTCAGCAGTGGAGTAACTTTACATTCTAAGGGAGCCCATTGAC-TT-----GTA-----GAAAGGACAGGTGTGGTTATGTTCTAGCACCACATAAACA-TGGAGGGAAATTGCAGAATGAGCCGCTGTTCTTTCCCTCAGATGCGTGAGGATGGGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1341680 696 + 1464242 cagcgtgaaaacagact----------aatacaATGAGGAAGTAAGAAGAGGCTGAA-TTCCTACATAATCCAGATGCTTC-------------CTGTGAGCTGCCACTAAGCTCT---GCTCTGCTGGAAG---------CTCACGTAGGAA-------------GAGTCTGCCTGGCACAGCTTCCCCAGGCCCCATCT-CCCTTAGAAAGGGC---AGACACCAAGGC--TGGGGAGGAGGCAGAGGGGAAGCCT-----------GCCAGTGTCCTG------------------------TAGGT-----------------------------GAAGCCCTCTGAGCCACATGGCC-ACAGAGGCCAGCAGGGGTTCCCCAGGAAGGAGGAGCTAAAAAGTAATCT---GGGAAACTCAAACCTGCCCCAAGAATTCTGGGAG-TTGAAGGGCACAGACACTAGACCAAGAGCAAAC---CACATCCCAAGAAGCCTTTACCAACTGGGGCCAGGG-----CAGGAGGCCTGGGTCTCAGGACAGCTCCCGGCTCTGAGATTGGC----------------------------------------------AGAAGTGTAGACGTCCCGCAGTTCAT-AGCAATGTCTTCCACAGCTGAGAGGGTCTCCGTG--------CGTGTGTCAGCCATCTGCAAATCTGACAGTGCTCGAATATTTTTTGATTCAGCAGTGGAGTAACTTTACATTCTAAGGGAGCCCATTGAC-TTGTAAGGTA-----GAAAGGACAGGTGTGGTTATGTTCTAGCACCACATAAACA-TGGAGGGAAATTGCAGAATGAGCCGCTGTTCTTTCCCTCAGATGCGTGAGGATGGGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1063916 695 + 81552678 cagcgtgaaaacagact----------aatacaATGAGGAAGTAAGAAGAGGCTGAA-TTCCTACATAATCCAGATGCTTC-------------CTGTGAGCTGCCACTACGCTCT---GCTCTGCTGGAAG---------CTCACGTGGGGA-------------AAGTCTGCCTGGCACAGCTTCCCCAGGCCCCATCTCCCCTCAGAAAGGGC---AGACACCAAGGC--TGGGGAGGAGGCAGAGGGGAAGCCA-----------GCCAGTGTCCTG------------------------TAGGT-----------------------------GAAGCCCTCTGAGCCACATGGCT-ACAGAGGCCAGCAGGGGTTCCCCAGGAAGGAGGAGCTAAAAAGTGATCT---GGGAAACTCAAACCTGCCCCAAGAATTCTGGGAG-TGGAAAGGCACAGACACTAGACCAAGAGCAAAC---CACATCCCAAGAAGCCTTTACCCAGTGGGGCCAGGG-----CAGGAGGCCTGGGTCTCAGGACAGCTCCTGGCTCTGAGATTGGC----------------------------------------------AGAAGTATAGACGTCCCGCAGTTCAC-AGCAATGTCTTCCGCAGCTGAGAGGGTCT-CGTT--------CATATGTCAGCCGTCTGCAAATCTGACGGTGCTAGAATATTTTTCGATTCAGCAGTGGAGTAACTTTACATTCTGAGGGAGCCCACTGGC-TT-----GTAAGGT-GAAAGGACAGGTGCGGTTATGTTCTAGCACCACATAAACA-TGGAGGGAAATTGCAGAATGAGCCGCTGTTCTTTCCCTCAGATGCGTGAGGATGGGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1397617 687 + 108979918 cagcatgaacacaaact----------aatacaATGAGGAAGTAAGAAGAGGCTGAATTTCCTACATAATCCAGACACTTT-------------CCGTCAGCTGCCACCACACTCT---GCTCTGCTGGAAG---------CTCACGTGGGAA-------------GAGTCTGCCTGGCACAGCTTCCCCAGGCCCCATCTCCCTTTAGAAAGGGC---AGACACCAAGGC--TGGGGAGGAGGCAGAGGGGAAGCCA-----------GCCAGCACCCTG------------------------TGGGT-----------------------------GAAGCCCTCTGAGCCACATGGCC-ACAGTGGCTAGCA-GGGTTCCCCAGGAAGGAGGAGCTAAGAAGTAATCTTCTGGGAAACTCAAACCTGCCCCAAGAATACTGGGAG-TTGAAGGGCACAGACACTAGACCAAGAGAAAAC---CAAGTCCCATGAAGCCTTTACCCAGTGGGGCCAGGG-----CAGGAGGCCTGGGTCTCAAGACAGCTCCCGGCTCTGAGATTGGC----------------------------------------------AGAAGTATAGACGTCCTACAGTTCAC-AGCAATGTCTTCCACAGCTGAGAGCGTCTCTGTG--------CATATGTCAGCCGTCTGCAAATCTGACAGTGCTAGAATACTTTTTGATTCAGCAGTGGAGTAATGTTATATTCTAATGGAGCCCATTGAC-TT-----GTACGCTAGAAAGGACAGGTGTGGTTATGTTCTAGCCCCACATAAACA-TGGAGGGAAGTTGCAGAACGAGCCACTGTTCTTTCCCTC-------------TGGGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1369907 687 - 111193037 cagcatgaacacaaact----------aatacaATGAGGAAGTAAGAAGAGGCTGAATTTCCTACATAATCCAGACACTTT-------------CCGTCAGCTGCCACCACACTCT---GCTCTGCTGGAAG---------CTCACGTGGGAA-------------GAGTCTGCCTGGCACAGCTTCCCCAGGCCCCATCTCCCTTTAGAAAGGGC---AGACACCAAGGC--TGGGGAGGAGGCAGAGGGGAAGCCA-----------GCCAGCACCCTG------------------------TGGGT-----------------------------GAAGCCCTCTGAGCCACATGGCC-ACAGTGGCTAGCA-GGGTTCCCCAGGAAGGAGGAGCTAAGAAGTAATCTTCTGGGAAACTCAAACCTGCCCCAAGAATACTGGGAG-TTGAAGGGCACAGACACTAGACCAAGAGAAAAC---CAAGTCCCATGAAGCCTTTACCCAGTGGGGCCAGGG-----CAGGAGGCCTGGGTCTCAGGACAGCTCCCGGCTCTGAGATTGGC----------------------------------------------AGAAGTATAGACGTCCTACAGTTCAC-AGCAGTGTCTTCCACAGCTGAGAGCGTCTCTGTG--------CATATGTCTGCCGTCTGCAAATCTGACAGTGCTAGAATACTTTTTGATTCAGCAGTGGAGTAATGTTATATTCTAATGGAGCCCATTGAC-TT-----GTACGCTAGAAAGGACAGGTGTGGTTATGTTCTAGCCCCACATAAACA-TGGAGGGAAGTTGCAGAACGAGCCACTGTTCTTTCCCTC-------------TGGGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1398462 687 + 3644372 cagcatgaacacaaact----------aatacaATGAGGAAGTAAGAAGAGGCTGAATTTCCTACATAATCCAGACACTTT-------------CCGTCAGCTGCCACCACACTCT---GCTCTGCTGGAAG---------CTCACGTGGGAA-------------GAGTCTGCCTGGCACAGCTTCCCCAGGCCCCATCTCCCTTTAGAAAGGGC---AGACACCAAGGC--TGGGGAGGAGGCAGAGGGGAAGCCA-----------GCCAGCACCCTG------------------------TGGGT-----------------------------GAAGCCCTCTGAGCCACATGGCC-ACAGTGGCTAGCA-GGGTTCCCCAGGAAGGAGGAGCTAAGAAGTAATCTTCTGGGAAACTCAAACCTGCCCCAAGAATACTGGGAG-TTGAAGGGCACAGACACTAGACCAAGAGAAAAC---CAAGTCCCATGAAGCCTTTACCCAGTGGGGCCAGGG-----CAGGAGGCCTGGGTCTCAGGACAGCTCCCGGCTCTGAGATTGGC----------------------------------------------AGAAGTATAGACGTCCTACAGTTCAC-AGCAATGTCTTCCACAGCTGAGAGCGTCTCTGTG--------CATATGTCAGCCGTCTGCAAATCTGACAGTGCTAGAATACTTTTTGATTCAGCAGTGGAGTAATGTTATATTCTAATGGAGCCCATTGAC-TT-----GTACGCTAGAAAGGACAGGTGTGGTTATGTTCTAGCCCCACATAAACA-TGGAGGGAAGTCGCAGAACGAGCCACTGTTCTTTCCCTC-------------TGGGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1351987 698 - 10304083 cagcatgaacacaaact----------aatacaATGAGGAGGTAAGAAGAGGCTGAATTTCCTACATAATCCAGACACTTT-------------CCGTCAGCTGCCACCACACTGT---GCTCTGCTGGAAG---------CTCATGTGGGAA-------------GAGTCTGCCTGGCACAGCTTCCCCAGGCCCCATCTCCCTTTAGAAAGGGC---AGACACCAAGGC--TGGGGAGGAGGCAGAGGGGAAGCCAGCCAGTATCCTGCCAGCATCCTG------------------------TGGGT-----------------------------GAAGCCCTCTGAGCCACATGGCC-ACAGTGGCTAGCA-GGGTTCCCCAGGAAGGAGGAGCTAAGAAGTAATCTTCTGGGAAACTCAAACCTGCCCCAAGAATTCTGGGAG-TTGAAGGGCACAGACACGAGACCAAGAGAAAAC---CAAGTCCCATGAAGCCTTTACCCAGTGGGGCCAGGG-----CAGGAGGCCTGGGTCTCAGGACAGCTCCGGGCTCTGAGATTGGC----------------------------------------------AGAAGTATAGACGTCCTACAGTTCAC-AGCAATGTCTTCCACAGCTGAGAGCGTCTCTGTG--------CATATGTCAGCCGTCTGCAAATCTGATAGTGCTAGAATACTTTTTGATTTAGCAGTGGAGTAATGTTATATTCTAATGGAGCCCATTGAC-TT-----GTACGCTAGAAAGGACAGGTGTGGTTATGTTCTAGCCCCACATAAACA-TGGAGGGAAGTTGCAGAACAAGCCACTGTTCTTTCCCTC-------------TGGGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1425713 687 - 107702431 cagcatgaacacaaact----------aatacaATGAGGAAGTAAGAAGAGGCTGAATTTCCTACATAATCCAGACACTTT-------------CCGTCAGCTGCCACCACACTCT---GCTCTGCTGGAAG---------CTCACGTGGGAA-------------GAGTCTGCCTGGCACAGCTTCCCCAGGCCCCATCTCCCTTTAGAAAGGGC---AGACACCAAGGC--TGGGGAGGAGGCAGAGGGGAAGCCA-----------GCCAGCATCCTG------------------------TGGGT-----------------------------GAAGCCCTCTGAGCCACATGGCC-ACAGTGGCTAGCA-GGGTTCCCCAGGAAGAAGGAGCTAAGAAGTAATCTTCTGGGAAACTCAAACCTGCCCCAAGAATTCTGGGAG-TTGAAGGGCACAGACACTAGACCAAGAGAAAAC---CAAGTCCCATGAAGCCTTTACCCAGTGGGGCCAGGG-----CAGGAGGCCTGGGTCTCAGGACAGCTCCCGGCTCTGAGATTGGC----------------------------------------------AGAAGTATAGACGTCCCACAGTTCAC-AGCAATGTCTTCCACAGCGGAGAGCGTCTCTGTG--------CATACGTCAGCCATCTGCAAATCTGACAGTGCTAGAATACTTTTTGATTCAGCAGTGGAGTAATGTTACATTCTAATGGAGCCCATTGAC-TT-----GTACACTAGAAAGGACAGGTGTGGTTATGTTCTAGCCCCACATAAACA-TGGAGGGAAGTTGCAGAACGAGCCACTGTTCTTTCCCTC-------------TGGGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 900476 698 - 2200435 cagcatgaacacaaact----------aatacaATGAGGAGGTAAGAAGAGGCTGAATTTCCTACATAATCCAGACACTTT-------------CCGTCAGCTGCCACCACACTGT---GCTCTGCTGGAAG---------CTCACGTGGGAA-------------GAGTCTGCCTGGCACAGCTTCCCCAGGCCCCATCTCCCTTTAGAAAGGGC---AGACACCAAGGC--TGGGGAGGAGGCAGAGGGGAAGCCAGCCAGCATCCTGCCAGCATCCTG------------------------TGGGT-----------------------------GAAGCCCTCTGAGCCACATGGCC-ACAGTGGCTAGCA-GGGTTCCCCAGGAAGGAGGAGCTAAGAAGTAATCTTCTGGGAAACTCAAACCTGCCCCAAGAATTCTGGGAG-TTGAAGGGCACAGACACTAGACCAAGAGAAAAC---CAAGTCCCATGAAGCCTTTACCCAGTGGGGCCAGGG-----CAGGAGGCCTGGGTCTCAGGACAGCTCCGGGCTCTGAGATTGGC----------------------------------------------AGAAGTGTAGACGTCCTACAGTTCAC-AGCAATGTCTTCCACAGCTGAGAGCGTCTCTGTG--------CATATGTCAGCCGTCTGCAAATCTGACAGTGCTAGAATACTTTTTGATTCAGCAGTGGAGTAATGTTATATTCTAATGGAGCCCATTGAC-TT-----GTACGCTAGAAAGGACAGGTGTGGTTATGTTCTAGCCCCACATAAACA-TGGAGGGAAGTTGCAGAACGAGCCACTGTTCTTTCCCTC-------------TGGGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1333852 699 - 13651311 cagcatgaacacaaact----------aatacaATGGGGAAGTAAGAAGAGGCTGAATTTCCTACATAATCCAGACACTTT-------------CCATCAGCTGCCACCACACTCT---GCTCTGCTGGAAG---------CTCACGTGGGAA-------------GAGTCTGCCTGGCACAGCTTCCCCAGGCCCCATCTCCCTTTAGAAAGGGC---AGACACCAAGGC--TGGGGAGGAGGCAGAGGGGAAGCCA-----------GCCAGCGTCCTG------------------------TGGGT-----------------------------GAAGCCCTCTGAGCCACATGGCC-ACAGGGGCTAGCA-GGGTTCCCCAGGAAGGAGGAGCTAAGAAGTGATCTTCCGGGAAACTCAAACCTGCCCCAAGAATTCTGGGAG-TTGAAGGGCACAGACACTAGACCAAGAGAAAAC---CAAGTCCCATGAAGCTTTCACCCAGTGGGGCTAGGG-----CAGGAGGCCTGGGTCTCAGGACAGCTCCCGGCTCCGAGATTGGC----------------------------------------------GGAAGTATAGCCGTCCTACAGTTCAC-AGCAATGTCTTCCACAGCCGA-AGCGTCTCTGTG--------CATACGTCAGCCATCTGCAAATCTGACAGTGCTAGAATACTTTTTGATTCAGCAGTGGAGTAATGTTATATTCTAATGGAGCCCATTGAC-TT-----GTATGCTAGAAAGGACAGGTGTGGTTATGTTCTCGCACCACGTAAACA-TGGAGGGAAGTTGCAGAACGAGCCACTGTCCTTTCCCTCAGATGCGTGAGGATGGGC i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1657719 873 + 4416731 CAGTGTGAAAAAAAAATTTGAGCATTAAATATAATTAGGAAGTAAAAAGTGATTGAA-TCTATATGAAATCCAAACACTTTAATTACTTTCAAACTCTCACCTGACAGAAAACTTTTTAACTCAGTAGAAAATGTACAGGTCTTCCGTAAGAAACTAACAAAACTGGAGTCTACGTGGCTAATCTTCACCAAACCAGCTCTCCACTTGGAAAGAGTGTGGAGGACCAAGACCTTAAAAAGGAGGAAGAGGGCAAGAAA-----------ACCAGGGTCCTGGGACTCCAAATCATGGCAAGACTTTGGGTCATAGAACCTGGAGATTAAGGTTGAGATGGAATTCTCCAAACTCATGTGGCAGGTATAAGCTGGCAGGGATTCACCAGGAACAAAGAGTTGAAGATGAATATTCTGGAAAATTCAAACATTTCTCAATGATTTGGGGTGACTGATGTCCTCTGACACTAGATTAAAAACAAACACACACATTCCAAGAAGGGATCACATAGTGGTACCCggggtggcaagcagatgcaactctcagaaaaatgcccatctttgatgatggcagcctggatggctaaattggaaggagtttgaagactgtccaagctcagaaggataaacgtcccataatttgtaagcaatatttaccacagttaaggaagTTTCAGTGGACTCTTACGTACAGCTGCCATCCATGAATTCAGCAAATTTGAAATGCTTTTTTATTCAGTAACTGAATAGCTTTTCATTCTGACAGAACCCATTGATACT-----GTAGAGTAGTAATGACATGGATAATTATGAGCTAACACTACATAAATGTTGTAGAAAAATCACAGTATCATCAATTGTTCTTTTCTGCAAATGTTTAAAGATAAGT i dasNov3.JH576208 C 0 I 46 e aotNan1.NW_018513311v1 76991 684 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1196361 0 - 7082604 C e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 918026 51 + 5252280 I e calJac3.chr14 1346644 0 - 108792865 C a score=102421.000000 s hg38.chr2_KI270774v1_alt 79839 20 + 223625 ATCGCGTCACGGGGAG--ACAG s panTro5.chr2A 1357428 20 + 111504155 ATCGCATCACGGGGAG--ACAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1317586 20 + 114371477 ATCGCGTCACGGGGAG--ACAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1342376 20 + 1464242 ATCGCGTCACGGGGAG--ACAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1064611 22 + 81552678 ATCGCATCACGGGGAGACACAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1398304 22 + 108979918 ATCGTGTCACAGGGAGACACAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1370594 22 - 111193037 ATCGTGTCACAGGGAGACACAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1399149 22 + 3644372 ATCGTGTCACAGGGAGACACAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1352685 22 - 10304083 ATCGTGTCACAGGGAGACACAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1426400 22 - 107702431 ATCGTGTCACAGGGAGACACAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 901174 22 - 2200435 ATCGTGTCACAGGGAGACACAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1334551 22 - 13651311 ATCGTGTAATGGGGAGACACAG i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 76991 684 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1196361 0 - 7082604 C e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 918026 51 + 5252280 I e dasNov3.JH576208 1658592 46 + 4416731 I e calJac3.chr14 1346644 0 - 108792865 C a score=5686784.000000 s hg38.chr2_KI270774v1_alt 79859 992 + 223625 TCTCATCCCAAATCCCACCTTTGCCATCAGGTAGGGAGCATGAGCCCCAGGTTAGAAGCTGTCAGTGTCTGTTAAC---------AATCAC-GTCCAGCTGGCCCGCCTAGGACCCAAGGCAGGCTTTT---------TTGCAAGCTACGTGTGGGCAAATGAATCCA-TCCTTGCTCCGTTGTG-CCTCACGAAAACATGCAATTTTAAAATAAAGCCGCAGAAGTTTAATAGAT--GCGTTAAATAGTTAATGCAT-TATGTAGGAGTAAATCATAGAACTTGGACTCAATGTTTCTATGGTATAT-AAACATCAGCATACTTGTTTTCAATGTATTCAAATAATGTGTATTTTCCAAATGAGACTTGCTATCCGTTCCAGACCCTGTACTCACTTGCTGTTGG------------------AACATTATCAAGGctcattttcgtcatctgaaaggtggaaacaatagtaggtgcctcataaagatgccgtaaggactcaaCACCTGCCAGCTTTATCTGTTTTAAGATCTATTGATAATTAGAGTTCACATACAGGAG--CCTCAGCTG-AGGAAAAAATCCAGTTCTGTTTATATTTGCCACAGTATCTTGTCTCTGCAAATTCCCTCAATTCAGAGATTATCACTGCTTCCCAACCAAGTTATCCCATTTTTACTGCAGGAAAACACAA----GAAGCACAAATCTGAAACATAGGGCATGACATGGGAGTTACTGACTT-CCATAGGTATGTGAGGATGCCTTC---------------------------CCTGAGTG----------------------CCCTGAGTGCC---------TGCAGATGCCGTGGCCCAGGAGGAAGATACACCATTCCCTCCCCAGGCAAGC-----CCTGAAAGT-TTGGCAGAGCCGTGCTCCAGTGCAGAGGGACTCCCATCTCAAAGTTTGTAGCTCCAGCTGCA-GCTCA-AATTCAGGCT------GGAAAGACATAGCCAGCTCTCGGCCCTC----TGCTGTTCCTGAGTCT--GAGGAAAAGCACAGAGGCTCATTCTAGTCTGTGCTGG--AGTGTGGCCTGTGGAGGCAGAGCTGGGAGGCCCT s panTro5.chr2A 1357448 1000 + 111504155 TCTCATCCCAAATCCCACCTTTGCCATCAGGTAGGGAGCATGAGCCCCGGGTTAGAAGCTGTCGGTGTCTGTTAAC---------AATCAC-GTCCAGCTGGCCTGCCTAGGACCCAAGGCAGGCTTCT---------T-GCAAGCTACGTGTGGGCAAATGAATCCA-TCCTTGCTCCGTTGTG-CCTCACGGAAACATGCAATTTTAAAATAAAGCCACAGAAGTTTAATAGAT--GCGTTAAATAGTTAATGCAT-TATGTAGGAGTAAATCATAGAACTTGGACTCAATGTTTCTATGGTATAT-AAACATCAGCATACTTGTTTTCAATGTATTCAAATAATGTGTATTTTCCAAATGAGACTTGCTATCCGTTCCAGACCCTGTACTCACTTGCTGTTGG------------------AACATTATCAAGGctcattttcatcatctgaaaggtggaaacaatagtaggtgcctcataaagatgccgtaaggactcaaCACCTGCCAGCTTTATCTGTTTTAAGATCTATTGATAATTAGAGTTCACATACAGGAG--CCTCAGCTG-AGGAAAAAATCCAGTTCTGTTTATATTTGCCACAGTATCTTGTCTCTGCAAATTCCCTCAATTCAAAGATTATCATTGCTTCCCAACCAAGTTATCCCATTTTTACTGCAGGAAAACACAA----GAAGCACAAATCTGAAACATAGGGCATGTCATGGGAGTTACTGACTT-CCATGGGTATGTGAGGATGCCTTc---------------------------cctgagtg----------------------ccctgagtgccctgagtgccTGCAGATGCCGTGGCCCAGGAGGAAGATACACCATTCCCTCCCCAGGCAAGC-----CCTGAAAGT-TTGGCAGAGCCGTGCTCCAGTGCAGAGGGACTCCCATCTCACAGTTTGTAGCTCCAGCTGCA-GCTCA-AATTCAGGCT------GGAAAGACATAGCCAGCTCTCGGCCCTC----TGCTGTTCCTGAGTCT--GAGGAAAAGCACAGAGGCTCATTCTAGTCTGTGCTGG--AGTGTGGCCTGCGGAGGCAGAGCTGGGAGGCCCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1317606 991 + 114371477 TCTCATCCCAAATCCCACCTTTGCCATCAGGTAGGGAGCATGATCCCCGGGTTAGAAGCTGTCGGTGTCTGTTAAC---------AATCAT-GTCCAGCTGGCCCGCCTAGGACCCAAGGCAGGCTTCT---------T-GCAAGCTACGTGTGGGCAAATGAATCCA-TCCTTGCTCCGTTGTG-CCTCACGGAAACATGCAATTTTAAAATAAAGCCACAGAAGTTTAATAGAT--GCGTTAAATAGTTAATGCAT-TATGTAGGAGTAAATCATAGAACTTGGACTCAATGTTTCTATGGTATAT-AAACATCAGCATACTTGTTTTCAATGTATTCAAATAATGTGTATTTTCCAAATGAGACTTGCTATCCGTTCCAGACCCTGTACTCACTTGCTGTTGG------------------AACATTATCAAGGctcattttcgtcatctgaaaggtggaaacaatagtaggtgcctcataaagatgccgtaaggactcaaCACCTGCCAGCTTTATCTGTTTTAAAATCTATTGATAATTAGAGTTCACATACGGGAG--CCTCAGCTG-AGGAAAAAATCCAGTTCTGTTTATATTTGCCACAGTATCTTGTCTCTGCAAATTCCCTCAATTCAGAGATTATCACTGCTTCCCAACCAAGTTATCCCATTTTTACTGCAGAAAAACACAA----GAAGCACAAATCTGAAACATAGGGCATGACATGGGAGTTACTGACTT-CCATGGGTATGTGAGGATGCCTTC---------------------------CCTGAGTG----------------------CTCTGAGTGCC---------TGCAGATGCCGTGGCCCAGGAGGAAGATACACCATTCCCTCCCCAGGCAAGC-----CCTGAAAGT-TTGGCAGAGCCGTGCTCCAGTGCAGAGGGACTCCCATCTCACAGTTTGTAGCTCCAGCTGCA-GCTCA-AATTCAGGCT------GGAAAGACATAGCCAGCTCTCGGCCCTC----TGCTGTTCCTGAGTCT--GAGGAAAAGCACAGAGGCTCATTCTAGTCTGTGCTGG--AGTGTGGCCTGCGGAGGCAGAGCTGGGAGGCCCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1342396 991 + 1464242 TCTCATCCCAAATCCCACCTTTGCCACCAAGTAGGGAGCATGAGCCCCAGGTTAGAAGCTGTCGGTGTCTGTTAAC---------AATCAC-GTCCAGCTGGCCTGCCTAGGACCCAAGGCAGGCTTCT---------T-GCAAGCTACGTGTGGGCAAATGAATCCA-TCCTTGCTCCGTTGTG-CCTCACGAAAACATGCAATTTTAAAGTAAAGCCACAGAAGTTTAATAGAT--GCGTTAAATAGTTAATGCAT-TATGTAGGAGTAAATCATAGAACTTGGACTCAATGTTTCTATGGTATAT-AAACATCAGCATACTTGTTTTCAATGTATTCAAATAATGTGTATTTTCCAAATGAGACTTGCTATCCGTTCCAGACCCTGTACTCACTTGCTGTTGG------------------AACATTATCAAGGctcgttttcctcatctgaaaggtggaaacaatagtaggtgcctcataaagatgccgtaaggactcaaCACCTGCCAGCATTATCTGTTTTAAGATCTATTGATAATTAGAGTTCACATACAGGAG--CCTCAGCTG-AGGAAAAAATCCAGTTCTGTTTATATTTGCCACAGTATCTTGTCTCTGCAAATTCCCTCAATTCAGAGATTATCACTGCTTCCCAACCAAGTTATCCCATTTTTACTGCAGGAAAACACAA----GAAGCACAAATCTGAAACATAGGGCATGACATGGGAGTTACTGACTT-CCATGGGTATGTGAGGATGCCTTC---------------------------CCTGAGTG----------------------CCCTGAGTGCC---------TGCAGATGCTGTGGCCCAGGAGGAAGATACACCATTCCCTCCCCAGGCAAGC-----CCTGAAAGT-TTGGCAGAGCCGTGCTCCAGTGCAGAGGGACTCCCATCTCACAGTTTGTAGCTCCAGCTGCA-GCTCA-AATTCAGGCT------GGAAAGACATAGCCAGCTCTCGGCCCTC----TGCTGTTCCTGAGTCT--GAGGAAAAGCACAGAGGCTCTTTCTAGTCTGTGCTGG--AGTGTGGCCTGCGGAGGCAGAGCTGGGAGGCCCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1064633 986 + 81552678 TCTCATCCCAAATCCCACCTTTGCCATCAAGTAGGGAGCATGAGCCCCAGGTTAGAAGCTGTCGGTGTCTGTTAAC---------AATCAC-ATCCAGCTGGCCCGCCTAGGACCCAAGGCAGGCTTCT---------T-GGAAGCTACATGTGGGCGAACGAATCCA-TCCTTGCTCTGTCGTG-CCTCACGAAAACATGCAATTTTAAAATAAAGCCACAGAAGTTTAATAGAT--ACGTTAAATAGTTAATGCAT-TATGTAGGAGCAAATCATAGAACTTGGACTCAATGTTTCTATGGTATAT-AAACATCGGCATACTTGTTTTCAATGTATTCAAATAACGTGTATTTTCCAAATGAGGCTTGCTATCCGTTCCAGACCCTGTACTCACTTGCTGTTGG------------------AACATTATCAAGGctcgttttcctcatctgaaaggtggaaacaatagtagttgcctcataaggatgccgtaaggactcaaCACCTGCCAGCTTTATCCGTTTTAAGATCTATTGATAATTAGAGTTCACATACAGGAG--CCTCAGCTG-GGGAAAAAATCCTGTTCTGTCTATATTTGCCACAGTATCTCGTCTCTGCAAATTCCCTCAATTCAGAGATTATCATTGCTTCCCAAGCAAGTTATCCCATTTTTACTGCAGGAAAACACAA---GGAAGCACAAATCTGAAACATAAGGCATGACATGGGAGTTACTGTCTT-CCATGGGTATGTGAGGACGCCTTC---------------------------CCTGAGTG----------------------CCCTGAGTGCC---------TGCAGATGCTGTGGCCTAGGAGGAAGATACACCATTCCCTCCCCCAGCAAGC-----TCTCAAAGT-TTGGCAGAGCCGTGTTCCAGTCCAAAGGGACTCCCATCTCCCAGT-------TCCAGCTGCAGGCTCG-AATTCAGGCT------GGAAAGACACAGCCAGCTCTTGGCCCCC----TGTCGTTCTTGAGTTT--GAGGAAAAGCACAGAGGCTTGTTATAGTCTGTGCTGG--AGTGTGGCCTGTGGAGGCAGAGCTGGGAGGCCCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1398326 950 + 108979918 TCTCATCCCAAATCCCACCTTTGCCATCAGGTAGGGAGCACGAGCCCCGGGTTAGAAGCTGTCAGTGTCTGTTAAC---------AATCGA-GTCCAGCTGGCCCGCCCAGGACCCAAGGCAGGCTTCT---------T----------GTGTGGGCAAATGAATCCA-ACCTTGCTCCATCGTT-CCTCATGAAAGCATGCAATTTTAAAATAAAGCCACAGAAGTTTAATAGAT--ACGTTAAATAGTTAATGCAT-TATGTAGGAGTAAATCATAGAACTTGGACTCGGTGTTTCTGTGGTTTTTAAAACATCCGCATACTTGTTTTCATTGTATCCAAATAAAGCGTATTTTCCAAGTGAGAGTTGCTATCCATTCCAGACCGTGTACTCACTTACTGTTGG------------------AACATTATCAAGGctcattttcctcatctgaaaggtggaaaca-----------------------------------aacacctgccagctttatccgttttaagatctattgattattagagttcacataCAGGAG--CCTCAGCTG-GGGAAAAACTCCAGTTCTGTCTATATTTGCCACAGTAGCTTGTCTCTGCAAATTTCCTTAATTCAGAGATTATCATTGCTTCCCAACCAAGTTATCCCGTTTTTACTGCAGGAAAACACGA---GGAAGCACAAATCTGAAATGTAGGGCATGACATGGGAGTTACTGACTT-CCATGGATATGTGAGGACGCCCTC---------------------------CCTGAGTG----------------------CCCTGAGAGCC---------TGCAGATGCTGCAGCCTGGGAGAAAAATACACCATTCCCTCCCCAGGCAAGT-----CTTCAACGT-TTGGTAAAGCCATGCTCCAGTCCAGACGGACTCCCATCTTACGTTTCCTAGCTCCAGCTGTAGGCTCG-AATTCAGTCT------GGAAAGACACAGCCAGCTCTGGGCCCTC----TGTCATTCTTGAGTTT--GAAGAAAAGCACAGAGGCTCGTTCCAGTCTGTGCTGG--AGTGTGGCCTGTGGAGGCAGAGCCGGGAGGCCCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1370616 985 - 111193037 TCTCATCCCAAATCCCACCTTTGCCATCAGGTAGGGAGCACGAGCCCCGGGTTAGAAGCTGTCAGTGTCTGTTAAC---------AATTGA-GTCCAGCTGGCCCGCCCAGGACCCAAGGCAGGCTTCT---------T----------GTGTGGGCAAATGAATCCA-ACCTTGCTCCATCGTT-CCTCATGAAAGCATGCAATTTTAAAATAAAGCCACAGAAGTTTAATAGAT--ACGTTAAATAGTTAATGCAT-TATGTAGGAGTAAATCATAGAACTTGGACTCGGTGTTTCTGTGGTTTATAAAACATCCGCATACTTGTTTTCATTGTATCCAAATAAAGCGTATTTTCCAAGTGAGAGTTGCTATCCATTCCAGACCCTGTACTCACTTACTGTTGG------------------AACATTATCAAGGctcattttcctcatctgaaaggtggaaacaatagtaggtgcctcataaagatgccgtaaggacttaaCACCTGCCAGCTTTATCCGTTTTAAGATCTATTGATAATTAGAGTTCACATACAGGAG--CCTCAGCTG-GGGAAAAACTCCAGTTCTGTCTATATTTGCCACAGTAGCTTGTCTCTGCAAATTTCCTTAATTCAGAGATTATCATTGCTTCCCAACCAAGTTATCCCGTTTTTACTGCAGGAAAACACGA---GGAAGCACAAATCTGAAATGTAGGGCATGACATGGGAGTTACTGACTT-CCATGGATATGTGAGGACGCCCTC---------------------------CCTGAGTG----------------------CCCTGAGAGCC---------TGCAGATGCTGCAGCCTGGGAGAAAAATACACCATTCCCTCCCCAGGCAAGC-----CTTCAACGT-TTGGTAAAGCCATGCTCCAGTCCAGACGGACTCCCATCTTACGTTTCCTAGCTCCAGCTGTAGGCTCG-AATTCAGTCT------GGAAAGACACAGCCAGCTCTGGGCCCTC----TGTCATTCTTGAGTTT--GAAGAAAAGCACAGAGGCTCGTTCCAGTCTGTGCTGG--AGTGTGGCCTGTGGAGGCAGAGCCGGGAGGCCCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1399171 985 + 3644372 TCTCATCCCAAATCCCACCTTTGCCATCAGGTAGGGAGCACGAGCCCCGGGTTAGAAGCTGTCAGTGTCTGTTAAC---------AATCGA-GTCCAGCTGGCCCGCCCAGGACCCAAGGCAGGCTTCT---------T----------GTGTGGGCAAATGAATCCA-ACCTTGCTCCATTGTT-CCTCATGAAAGCATGCAATTTTAAAATAAAGCCACAGAAGTTTAATAGAT--ACGTTAAATAGTTAATGCAT-TATGTAGGAGTAAATCATAGAACTTGGACTCGGTGTTTCTGTGGTTTATAAAACATCCGCATACTTGTTTTCATTGTATCCAAATAAAGCGTATTTTCCAAGTGAGAGTTGCTATCCATTCCAGACCCTGTACTCACTCACTGTTGG------------------AACATTATCAAGGctcattttcctcatctgaaaggtggaaacaatagtaggtgcctcataaagatgccgtaaggacttaaCACCTGCCAGCTTTATCCGTTTTAAGATCTATTGATAATTAGAGTTCACATACAGGAG--CCTCAGCTG-GGGAAAAACTCCAGTTCTGTCTATATTTGCCACAGTAGCTTGTCTCTGCAAATTTCCTTAATTCAGAGATTATCATTGCTTCCCAACCAAGTTATCCCGTTTTTACTGCAGGAAAACACGA---GGAAGCACAAATCTGAAATGTAGGGCATGACATGGGAGTTACTGACTT-CCATGGATATGTGAGGACGCCCTC---------------------------CCTGAGTG----------------------CCCTGAGAGCC---------TGCAGATGCTGCAGCCTGGGAGAAAGATGCACCATTTCCTCACCAGGCAAGC-----CTTCAACAT-TTGGTAAAGCCATGCTCCAGTCCAGACGGACTCCCATCTTACGTTTCCTAGCTCCAGCTGTAGGCTCA-AATTCAGTCT------GGAAAGACACAGCCAGCTCTGGGCCCTC----TGTCATTCTTGAGTTT--GAAGAAAAGCACAGAGGCTCATTCCAGTCTGTGCTGG--AGTGTGGCCTGTGGAGGCAGAGCCGGGAGGCCCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1352707 985 - 10304083 TCTCATCCCAAATCCCACCTTTGCCATCAGGTAGGGAGCACGAGCCCCGGGTTAGAAGCTGTCAGTGTCTGTTAAC---------AATTGT-GTCCAGCTGGCCCGCCCAGGACCCAAGGCAGGCTTCT---------T----------GTGTGGGCAAATGAATCCA-ACCTTGCTCCGTCGTT-CCTCACGAAAGCATGCAATTTTAAAATAAAGCCACAGAAGTTTAATAGAT--ACGTTAAATAGTGAATGCAT-TATGTAGGAGTAAATCATAGAACTTGGACTCGGTGTTTCTATGGTTTATAAAACATCAGCATACTTATTTTCAATGTATTCAAATAAAGCGTATTTTCCAAATGAGAGTTGCTATCCATTCCAGACCCTGTACTCACTTACTGCTGG------------------AACATTATCAAGGctcattttcctcatctgaaagttggcaacaatagtaggtgcctcataaagatgccgtaaggactcaaCACCTGCCAGCTTTATCCGTTTTAAGATCTATTGATAATTAGAGTTCACATACAGGAG--CCTCAGCTG-GGGAAAAAATCCAGTTCTGTCTATATTTGCCACAGTAGCTTGTCTCTGCAAATTTCCTTAATTCAGAGATTATCATTGCTTCCCAACCAAGTTATCCCATTTTTACTGCAGGAAAATACGA---GGAAGCACAAATCTGAAATGTAGGGCATGACATGGGAGTTACTGACTT-CCATGGATATGTGAGGACGCCCTC---------------------------TCTGAGTG----------------------CCCTGAGAGCC---------TGCAGATGCTGCAGCCTGGGAGGAAGATACACCATTCCCTCCCCAGGCAAGC-----CTTCAACAT-TTGGTAGAGCCATGCTCCAGTCCAGACGGACTCCCATCTTACGTTTCCTAGCTCCAGCTGTAGGCTCG-AATTCAGTCT------GGAAAGACACAGCCAGCTCTGGGCCCTC----TGTCATTCTTGAGTTT--GAAGAAAAGCACAGAGGCTCGTTCCAGTCTGTGCTGG--AGTGTGGCCTGTGGAGGCAGAGCCGGGAGGCCCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1426422 979 - 107702431 TCTCATCCCAAATCCCACCTTTGCCATCAGGTAGGGAGCACGAGCCCCGGGTTAGAAGCTGTCAGTGTCTGTTAAC---------AATCGT-GTCCAGCTGGCCCGCCCAGGACCCAAGGCAGGCTTCT---------T----------GTGTGGGCAGATGAATCCA-ACCTTGCTCCATCGTT-CCTCATGAAAGCATGCAATTTTAAAATAAAGCCACAGAAGTTTAATAGAT--ACATTAAATAGTTAATGCAT-TATGTAGGAGTAAATCATAGAACTTGGACTCGGTGTTTCTATGGTTTATAAAACATCAGCATACTTGTTTTCAATGTGTTCAAATAAAGCATATTTTCCAAGTGAGAGTTGCTATCCATTCCAGACCCTGTACTC----ACTGTTGG------------------AACATTATCAAGGctcattttcctcatctgaaaggtggaaacaatagtaggtgcctcataaagatgccgtaaggactcaaCACCTGCCAGCTTTATCCGTTTTAAGATCTATTGATAATTAGAGTTCACATACAGGAG--CCTCAGCTG-GGGAAAAACTCCAGTTCTGTCTATATTTGCCACAGTAGCTTGTCTCTGCAAATTTCCTTAATTCAGAGATTATCATTGCTTCCCAACCAAGTTATCCCATTTTTACTGCAGGAAAACACAA---GGAAGCACAAATCTGAAATGTAGGGCATGACATGGGAGTTACTGACTT-CCAGGG--ATGTGAGGACACCCTC---------------------------CCTGAGTG----------------------CCCTGAGAGCC---------TGCAGATGCTGCAGCCTGGGAGGAAGATACACCATTCCCTCCCCAGGCAAGC-----CTTCAACAT-TTGGTAGAGCCATGCTCCAGTCCAGATGGACTCCCATCTCACGTTTCCTAGCTCCAGCTGTAGGCTTG-AATTCAGTCT------GGAAAGACACAGCCAGCTCTGGGCCCTC----TGTCATTCTTGAGTTT--GAAGAAAAGCACAGAGGCTCGTTCCAGTCTGTGCTGG--AGTGTGGCCTGTGGAGGCAGAGCTGGGAGGCCCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 901196 985 - 2200435 TCTCATCCCAAATCCCACCTTTGCCATCAGGTAGGGAGCACGAGCCCCGGGTTAGAAGCTGTCAGTGTCTGTTAAC---------AATTGT-GTCCAGCTGGCCCGCCCAGGACCCAAGGCAGGCTTCT---------T----------GTGTGGGCAAATGAATCCA-ACCTTGCTCCGTCGTT-CCTCACGAAAGCATGCAATTTTAAAATAAAGCCACAGAAGTTTAATAGAT--ACGTTAAATAGTTAATGCAT-TATGTAGGAGTAAATCATAGAACTTGGACTCGGTGTTTCTATGGTTTATAAAACATCAGCATACTTGTTTTCAATGTATTCAAATAAAGCGTATTTTCCAAATGAGAGTTGCTATCCATTCCAGACCCTGTACTCACTTACTGTTGG------------------AACATTATCAAGGctcattttcctcatctgaaaggtggaaacaatagtaggtgcctcataaagatgccgtaaggactcaaCACCTGCCAGCTTTATCCGTTTTAAGATCTATTGATAATTAGAGTTCACATACAGGAG--CCTCAGCTG-GGGAAAAAATCCAGTTCTGTCTATATTTGCCACAGTAGCTTGTCTCTGCAAATTTCCTTAATTCAGAGATTATCATTGTTTCCCAACCAAGTTATCCCATTTTTACTGCAGGAAAATACAA---GGAAGCACAAATCTGAAATGTAGGGCATGACATGGGAGTTACTGACTT-CCATGGATATGTGAGGACGCCCTC---------------------------CCTGAGTG----------------------CCCTGAGAGCC---------TGCAGATGCTGCAGCCTGGGAGGATGATACACCATTCCCTCCCCAGGCAAGC-----CTTCAACAT-TTGGTAGAGCCATGCTGCAGTCCAGAGGGACTCCCATCTTACGTTTCCTAGCTCCAGCTGTAGGCTCG-AATTCAGTCT------GGAAAGACACAGCCAGCTCTGGGCCCTC----TGTCATTCTTAAGTTT--GAAGAAAAGCACAGAGGCTCGTTCCAGTCTGTGCTGG--AGTGTGGCCTGTGGAGGCAGAGCCGGGAGGCCCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1334573 994 - 13651311 TCTCATCCCAAATCCCACCTTTGCCATCAAATAGGGAGCACGAGCCCTGGGTTAGAAGCTGTCCGTGTCTGTTAAC---------AATCGT-GTCCAGCTGGCCCACCCAGGACCCAAGGCAGGCTTCTTGCAAGCTAT----------GTGTGGGCAAATGAATCCA-ACCTTGCTCCATCGTT-CCTTATGAAAGCATGCAATTTTAAAATGAAGCCACAGAAGTTTAATAGAT--ACGTTAAATAGTTAATGCAT-TATGTAGGAGTAAACCATAGAACTTGGACTCAATGTTTCTATGGTTTATAAAACATCACCATACTTGTTTTCAATGTATTCAAATAAAGTGTATTTTCCAAATGAGAGTTGCTCTCCATTCCAGATCCTGTACTCACTTACTGTTGG------------------AACATTATCCAAGctcattttcctcatctgaaaggtggaaacaatagtaggtgcttcataaagatgccgtaaggactcaaCACCTGCCAGCTTTATCTGTTTTAAGATCTATTGATAATTAGAGTTCACATACAGGAG--CCTTAGCTG-GGGAAAAAATCCAGTTCTGTCTGTATTTGCCACAGTAGCTTGTCTCTGCAAATTTCCTTAATTCAGAGATTATCATCGCTTCCCAACCAAGTTATCCCATTTTTACTGCAGGAAAACACGA---GGAAGCACAAATCTGAAATACAGGGCATGACATGGGAGTTACTGACTT-CCATGGATATGTGAGGACGCCCTC---------------------------CCTGAGTG----------------------CCCTGAGAGCC---------TGCAAATGCTGCAGCCTGGGAGGAAGATACACCATTCCCTCCCCAGGCAAGC-----CTTCAACGT-TTGGTAGAGCCATGCTCCAGTCCAGACGGACTCCCATCTCACGTTTCCTAGCTCCAGCTGTAGGCTCG-AATTCAGTCT------GGAAAGACACAGCCAGCTCTTGGCCCTC----TGTCATTCTTGAGTTT--GAAGAAAAGCACAGAGGCTCGTTCCAGTCTGTGCTAG--AGTGTGGCCTGTGGAGGCAGAGCTGGGAGGCCCT i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1658638 1041 + 4416731 TCTTATTCCAAATGTTATCTTCACAGTTGAATTCTTTGCACAATTTCTTTGCTAGAAGCTATTTGTGTTCATTAATAGGGTTTCAAATTACAGTGCATGTTGCTAACATGAGAACTGATGCAGTCTTCC---------A-GATAGTTATGCATAAGCAAACCAATCCATACACTTTTTGATTATGATCGAGTTAAAATATATAATTTGAGaataaa-----------tgaataaataaatgttaaataaataaaGCATACATTTTGGAGTAAACCATAAAACTTGAACTCCATGCTACAATGGCATGTAAAATATTAGCATGCTTGCTTATGATATTTTCAaa----gagtatttctcaaataagacttgccttctgtctcagccccagcacctgctgggtgttaaccattcacaagtaacttcagcattggtgagcctcagttccctcatctgaaaattggaaataatagcaagtgtctcaG--------------------------------TTTATGTA-TTCAATATATATTGGTGACTATTGTTAATAT-CTGAAGTTCCACATTTGTGGGAAAAAAT--AGTGCTATTCATATTGGCCACAGCATATTAATTCTGTATATTTTCTGAATT-AGAGA--ACTATTGCTTCCCAAGCAAGTTATCCCAATTTTGTCACAGGAAATCAAAATCATGAAACAC----CTGTAATGTA-GGCATAACATGAAAATTATTTATTTGGAATGTCTATGTGAAAAATTCCTCTGCAGACAGTCTCGCAGATCAAAAAAACAGAAGTAACAACAACAACAAATCAGCTACCCCTCCAAGCT---------TCCTAATAATACTACTTAGAAGGAAGATATATCAGGCTTTTCCC---CAGACTTCTTCCTCAAGGCATTGACAGAACATTGCTTAGATCCAAAAGGATTACCTTTCTA-AATTCCAAGCTTTAGCTACAGGCTCATTATTCAGTCCAGAAGGGAAAAGACAAAGCCAACTCCTTACTCTCTTATTTTTATTCTTGACATTGAGAAAAAAAGTACAAAGGCTCTTTTAAGTCCATGCCAGGCGTTCTGAGTTATGGAAACATCACTTGAAGATTCT i dasNov3.JH576208 I 46 I 1059 e aotNan1.NW_018513311v1 76991 684 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1196361 0 - 7082604 C e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 918026 51 + 5252280 I e calJac3.chr14 1346644 0 - 108792865 C a score=1223557.000000 s hg38.chr2_KI270774v1_alt 80851 230 + 223625 GCTGCATCTCTGGTCCTCGTTGTTGCTCTCCCAGCCTCCAAGCCTCCCACCCCCGGGTCCTGATGCAGGGGAAGGGGCTCCTCCATCCTC--CTCTCTCTGCCTGGCAGTTGGCTCCTCTGCTTTGCCCATCAGAGGTGTGTGTTTTCCGATCCTCTCTGCACAACCCCCGATGTTGTCTCTCCTTCCATCAGCCCCCAGCAGAGCATTTTCAAACCCAGACACATGTCAGA s panTro5.chr2A 1358448 230 + 111504155 GCTGCATCTCTGGTCCTCGTTGTTGCTCTCCCAGCCTCCAAGCCTCCCACCCCCGGGTCCTGATGCAGGGGAAGGGGCTCCTCCGTCCTC--CTCTCTCTGCCTGACAGTTGGCTCCTCTGCTTTGCCCATCAGAGGTGTGTGTTTTCCGATCCTCTCTGCACAACCCCCGATGTTGTCTCTCCTTCCATCAGCCCCCAGCAGAGCATTTTCAAACCCAGACACACGTCAGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1318597 230 + 114371477 GCTGCATCTCTGGTCCTCGTTGTTGCTCTCCCAGCCTCCAAGCCTCCCACCCCCGGGTCCTGATGCAAGGGAAGGGGCTCCTCCGTCCTC--CTCTCTCTGCCTGGCAGTTGGCTCCTCTGCTTTGCCCATCAGAGGTGTGTGTTTTCCGATCCTCTCTGCACAACCCCCGATGTTGTCTCTCCTTCCATCAGCCCCCAGCAGAGCATTTTCAAACCCAGACACACGTCAGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1343387 229 + 1464242 GCTGCATCTCTGGTCCTCGTTGTTGCTCTCCCAGCCTCCAAGCCTCCCA-CCCCGGGTCCTGATGCAGGGGAAGGGGCTCCTCCGTCCTC--CTCTCTCTGCCTGGCAGTTGGCTCCTCTGCTTTGCCCATCAGAGGTGTGTGTTTTCCGATCCTCTCTGCACAACCCCCGATGTTGTCTCTCCTTCCATCAGCCCCCAGCAGAGCATTTTCAAACCCAGACACACATCAGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1065619 230 + 81552678 GCTGCATCTCTGGTCCTCGTTGTTGCTCTCCCAGCCTCCAAACCTCCCACCCCCGGGTCCTGATGCAGGGGAAGGGACTCCTCCGTCCTC--CTCTCTCTGCCTGGCAGTTGGCTCCTCTGCTTTGCCCATCAGAGGTGTGTGTTTTCCAATCCTCTCTGCACAACTCCCGATGTTCTCTCTCCTTCCATCAGCCCCCAGCAGAGCATTTTCAAACCCAGACACGTGTCAGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1399276 215 + 108979918 GCTGCTTCTCTGGTCCTCGTTGTTGCTCTCCCAGCCTCCAAGCCTCCCATCCCTGG----------GAGAGAAGGGGCTCCTCTATCCTC--CTCTCTCTGCCTGGCAGTTGGCTCCTCTGCTTTGCCCATCAGAGGTGTGTGTTT-----TCCTCTCTGCACAACGCCCGATATTCTCTCTCCTTCCGTCAGCCCCCAGCAGAGCATTTTCCAACCCAGACACACGTCAGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1371601 215 - 111193037 GCTGCTTCTCTGGTCCTCGTTGTTGCTCTCCCAGCCTCCAAGCCTCCCATCCCTGG----------GAGAGAAGGGGCTCCTCTATCCTC--CTCTCTCTGCCTGGCAGTTGGCTCCTCTGCTTTGCCCATCAGAGGTGTGTGTTT-----TCCTCTCTGCACAACGCCCGATATTCTCTCTCCTTCCGTCAGCCCCCAGCAGAGCATTTTCCAACCCAGACACACGTCAGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1400156 215 + 3644372 GCTGCTTCTCTGGTCCTCGTTGTTGCTCTCCCAGCCTCCAAGCCTCCCATCCCTGG----------GAGAGAAGGGGCTCCTCTATCCTC--CTCTCTCTGCCTGGCAGTTGGCTCCTCTGCTTTGCCCATCAGAGGTGTGTGTTT-----TCCTCTCTGCACAACGCCCGATATTCTCTCTCCTTCCGTCAGCCCCCAGCAGAGCATTTTCCAACCCAGACACACGTCAGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1353692 226 - 10304083 GCTGCTTCTCTGGTCCTCGTTGTTGCTCTCCCAGCCTCCAAGCCTCCCACCCCCGG-TCCTGATGCAGGAGAAGGGGCTCCTCCATCCTCCTCTCTCTCTGCCTGGCAGTTGGCTCCTCTGCTTTGTCCGTCAGAGGTGTGTGTTT-----TCCTCTCTGCACAACCCCCGATATTCTCTCTCCTTCCATCAGCCCACAGCAGAGCATTTTCAAACCCAGACACACGTCAGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1427401 222 - 107702431 GCTGCTTCTCTGGTCCTCGTTGTTGCTCTCCCAGCCTCCAAGCCTCCCACCCCTGG----------GAGAGAAGGGGCTCCTCCATCCTCCTCTCTGTCTGCCTGGCAGTTGGCTCCTCTGCTTTGCCCATCAGAGGTGTGTGTTTTCCAATCCTCTCTGCACAACCCCCGATATTCTCTCTTCTTCCATCTGCCCCCAGCCGAGCATTTTCAAACCCAGACACACGTCAGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 902181 226 - 2200435 GCTGCTTCTCTGGTCCTCGTTGTTGCTCTCCCAGCCTCCAAGCCTCCCGCCCCCGG-TCCTGATACAGGAGAAGGGGCTCCTCCATCCTCCTCTCTCTCTGCCTGGCAGTTGGCTCCTCTGCTTTGTCCATCAGTGGTGTGTGTTT-----TCCTCTCTGCACAACCCCCAATATTCTCTCTCCTTCCATCAGCCCACAGCAGAGCATTTTCAAACCCAGACACACGTCAGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1335567 231 - 13651311 GCTGCTTCTCTGGTCCTCGTTGTTGCTCTCCCAGCCTCCAAGCCTCCCACCCCCTGGTCCTGATGCAGGAGAAGGGGCTCCTGCATCCTCCTCTCTCTCTGCCTGGCAGTTGGCTCCTCTGCTTTGCCCATCAGAGGTATGTGTTTTCCAATCCTCTCTGCACAACCCCCGATATTCTCTCT-CTTCCATCAGCCCCCAGCAGAGCATTTTCAAACCGAGACACATGTCAGA i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 76991 684 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1196361 0 - 7082604 C e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 918026 51 + 5252280 I e dasNov3.JH576208 1659679 1059 + 4416731 I e calJac3.chr14 1346644 0 - 108792865 C a score=1519030.000000 s hg38.chr2_KI270774v1_alt 81081 258 + 223625 AGCTCCTTTATCCAGCTCCCATGGGGCGTACCTGGGGTCAAAACTTCCAGAGTTCCAAATATGC-ACCTTGTGCAGAAAAAAGTACTTCCCATGCCACAAACAAAGGGTACAAGAAAAGTAGTGTTCCGCACATTTTCAGGCATGCAACTTCATCTCTTGGTTAAGCTCCACTTCCAGACAGTGAAGGAAAATAAATCCAGTCAACTCCAAGAAAAACCAGGCAT-AGTTTTCATTCCTC------CCTCACTCAGGGATGACTCC s panTro5.chr2A 1358678 258 + 111504155 AGCTCCTTTATCCAGCTCCCATGGGGCGTACCTGGGGTCAAAACTTCCAGAGTTCCAAATATGC-ACCTTGTGCAGAAAAAAGTACTTCCCATGCCACAAACAAAGGGTACAAGAAAAGTAGTGTTCCACACATTTTCAGGCATGCAACTTCATCTCTTGGTTAAGCTCCACTTCCAGACAGTGAAGGAAAATAAATCCAGTCAACTCCAAGAAAAACCAGGCAT-AGTTTTCATTCCCC------CCTCACTCAGGGATGACTCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1318827 259 + 114371477 AGCTCCTTTATCCAGCTCCCATGGGGCGTACCTGGGGTCAAAACTTTCAGAGTTCCAAATATGC-ACCTTGTGCAGAAAAAAGTACTTCCCATGCCACAAACAAAGGGTACAAGAAAAGTAGTGTTCCGCACATTTTCAGGCATGCAACTTCATCTCTTGGTTAAGCTCCACTTCCAGACAGTGAAGGAAAATAAATCCAGTCAACTCCAAGAAAAACCAGGCATCAGTTTTCATTCCCC------CCTCACTCAGGGATGACTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1343616 258 + 1464242 AACTCCTTTATCCAGCTCCCATGGGGCGTACCTGGGGTCAAAACTTCCAGAGTTCCAAATATGC-ACCTTGTGCAGAAAAAAGTACTTCCCATGCCACAAACAAAGGGTACAAGAAAAGTAGTGTTCTGCACATTTTCAGGCATGCAACTTCATCTCTTGGTTAAGCTCCACTTCCAGACAGTGAAGGAAAATAAATCCAGTCAACTCCAAGAAAAA-CAGGCATCAGTTTTCATTCCCC------CCTCACTCAGGGATGACTCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1065849 258 + 81552678 AGCTCCTTTATCCAGCTCCCATGGGGCGTACCTGGGGTCAAAACTTCCAGAGTTCCAAATATGC-ACCTGGTGCAGAAAAAAGTATTTCCCATGCCACAAACAAAGGGTATAAG-AAAGTAGTGTTCTGCACATTTTCAGGCATGCAACTTCATCTCTTGGTTAAGCCCCACTTCCAGACAGTGAAGGAAAATAAATCCAGTCAACTCCAAGAAAAACCAGGCATCAGTTTTCATTCCCC------CCTCACTCAGGGATGACTCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1399491 257 + 108979918 AACTCGTTTTTCCAGCTCCCATGGGGCGTACCTGGGGTCAAAACTTCCAGAGTTCCAATTATGC-ACCTTGTACAGAAAAAAGTATTTCCCATGCCACAAAC-AAGGGTCCAAGAATAGTAGCATTCCACACATTTCCAGGCATGCAATTTCATCTCTTGGTTAAGCCCCACTTCCAGACAGTGAAGGAAAATAAATCCAGTCAACTCCAAGAAAAACCAGGCATCAGTTTTCATTCCCC-------CTCACTCAGGGGTGACTGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1371816 257 - 111193037 AGCTCGTTTTTCCAGCTCCCATGGGGCGTACCTGGGGTCAAAACTTCCAGAGTTCCAATTATGC-ACCTTGTACAGAAAAAAGTATTTCCCATGCCACAAAC-AAGGGTCCAAGAATAGTAGCATTCCACACATTTCCAGGCATGCAATTTCATCTCTTGGTTAAGCCCCACTTCCAGACAGTGAAGGAAAATAAATCCAGTCAACTCCAAGAAAAACCAGGCATCAGTTTTCATTCCCC-------CTCACTCAGGGGTGACTGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1400371 257 + 3644372 AACTCGTTTTTCCAGCTCCCATGGGGCGTACCTGGGGTCAAAACTTCCAGAGTTCCAATTATGC-ACCTTGTACAGAAAAAAGTATTTCCCATGCCACAAAC-AAGGGTCCAAGAATAGTAGCATTCCACACATTTCCAGGCATGCAATTTCATCTCTTGGTTAAGCCCCACTTCCAGACAGTGAAGGAAAATAAATCCAGTCAACTCCAAGAAAAACCAGGCATCAGTTTTCATTCCCC-------CTCACTCAGGGGTGACTGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1353918 258 - 10304083 AACTCATTTTTCCAGCTCCCATGGGGCGTACCTGGGGTCAAAACTTCCAGAGTTCTAATTATGC-ACCTTGTGCAGAAATAAGTATTTCCCACGCCACAAACAAAGGGTCCAAGAAAAGTAGCATTCCACACATTTTCAGGCATGCAATTTCATCTCTTGGTTAAGCCCCACTTCCAGACAGTGAAGGAAAATAAATCCAGTCAACTCCAAGAAAAACCAGGCATCAGTTTTCATTCCCC-------CTCACTCAGGGGTGACTGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1427623 258 - 107702431 AACTCGTTTCTCCAGCTCCCATGGGGCGTACCTGGGGTCAGAACTTCCAGAGTTCCAATTATGC-ACCTTGTGCAGAAAAAAGTATTTCCCATGCCACAAACAAAGGGTCCAAGAAAAGTAGCATTCCACACATTTTCAGGCATGCAATTTCATCTCTTGGTTAAGCCCCACTTCTAGACAGGGAAGGAAAATAAATCCAGTCAATTCCAAGAACAACCAGGCATCAGTTTTCATTCCCC-------CTCACTCAGGGGTGACTGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 902407 258 - 2200435 AACTCGTTTTTCCAGCTCCCATGGGGCGTACCTGGGGTCAAAACTTCCAGAGTTCCAATTATGC-ACCTTGTGCAGAAATAAGTATTTCCCACGCCACAAACAAAGGGTCCAAGAAAAGTAGCATTCCGCACATTTTCAGGCATGCAATTTCATCTCTTGGTTAAGCCCCACTTCCAGACAGTGAAGGAAAATAAATCCAGTCAACTCCAAGAAAAACCAGGCATCAGTTTTCATTCCCC-------CTCACTCAGGGGTGACTGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1335798 254 - 13651311 AACTCGTTTTTCCGGCTCCCATGAGGCTTACCTGGGGTCAAAACTTCCAGAGTTCCAATTATGC-ACCTTATGCAGAAAAAAGTATTTCCCATGCCACA----AAGGGTCCAAGAAAAGTAGCATTCCACACATTTTCAGGCATGCAATTT-ATCTCTTGGTTAAGCCCCACTTCCAGACAGTGAAGGAAAATAAATCCAGTCAACTCCAAGAAAAACCAGGCATCAGTTTTCATTCCCC------ACTCACTCAGGAATGACTCT i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 918077 262 + 5252280 AGCTCACTTTTCTGACTCCCACTGGGTATAACTGAGGTCAGTCCCTCAGGCCTTCCAAATACCCAACCTCATACAGAATAAAATGTCCCCCATTCCACAAACAAAGGGAAT-AGAAAAGTCTTGTTCTGGGCATTTTTAGGCACTAAACTTAGTCTCCATGTGATGCTGC-TTTACAGG-AGGCAAGGGAAACGAATACAATTAACTTCAC-AAATACCAGTCATCACTGTCCTTTCCTCAGGAGCCCTCACTCCTGGGTGGCCCC i otoGar3.GL873658 I 51 I 10 e aotNan1.NW_018513311v1 76991 684 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1196361 0 - 7082604 C e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e dasNov3.JH576208 1659679 1059 + 4416731 I e calJac3.chr14 1346644 0 - 108792865 C a score=3142426.000000 s hg38.chr2_KI270774v1_alt 81339 541 + 223625 GGTGA-GGGACAGGACTGTGGCCAGGGCTTCTGTCTTTTCCCCACTCTCTGCTGGCATCTCCCCATCAGTCCTAGGGGAACCACAGATGCCTGCTGGCACCCAGTGATGTGTGGTGGCCTCCCTGTATCCT---------------GCAGGCAGCCTGGGGCCCATCTCCTGACTGCCGCGCTGCCCACAAACTACTGTTGCCTTTGGATCACTTCTATGCCAGCTCTGGCACGGCTGGAAACTTGTGGGTTTCAATCAGGCCATCTCCCCAGACACCCACACCCCACGCCTGCCTGGCTTCCCACTGCAAACAAGGCTGGCCACC--ACCCGGCACCAGCTCAGAAGCAAAGACCACTCCATGGGTTCTCAGACCTCACCCAGTGGGCGGCTCCTGTTGTGGCCCCAGCATTGCAGACATCACAGGCGGAGACCTCTGTCCCTTCTCTGCCTCCCCACAGCTCAGCATTTATCTAGCTGGGCAGGGAGGGTCTGGACAAAACTGCAGTGGGAGAGGTCATGAATATCACC-TGGTTCATGTGCAGGCAAGCCCTGGTTT s panTro5.chr2A 1358936 541 + 111504155 GGTGA-GGGACAGGACTGTGGCCAGGGCTTCTGTCTTTTCCCCACTCTCTGCTGGCATCTCCCCATCAGTCCTAGGGGAACCACAGATGCCTGCTGGCACCCAGTGATGTGTGATGGCCTCCCTGTATCCT---------------GCAGGCAGCCTGGGGCCCATCTCCTGACTGCCGCGCTGCCCACAAACTACTGTTGCCTTTGGATCACTTCTATGCCGGCTCTGGCACAGCTGGAAACTTGTGGGTTTCAATCAGGCCGTCTCCCCAGACACCCACACCCCACGCCTGCCTGGCTTCCCACTGCAAACAAGGCTGGCCACC--CCCCGGCACCAGCTCAGAAGCAAAGACCACTCCATGGGTTCTCAGACCTCACCCAGTGGGCGGCTCCTGTTGTGGCCCCAGCATTGCAGACATCACAGGCGGAGGCCTCTGTCCCTTCTCTGCCTCCCCACAGCTCAGCATTTATCTAGCTGGGCAGGGAGGGTCTGGACAAAACTGCAGTGGGAGAGGTCATGAATATCACC-TGGTTCATGTGCAGGCAAGCCCTGGTTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1319086 540 + 114371477 GGTGA-GGGACAGGACTGTGGCCAGGGCTTCTGTCTTTTCCCCACTCTCTGCTGGCATCTCCCCATCAGTCCTAGGGGAACCACAGATGCCTGCTGGCACCCAGTGATGTGTGGTGGCCTCCCTGTATCCT---------------GCAGGCAGCCTGGGGCCCATCTCCTGACTGCCGCGCTGCCCACAAACTACTGTTGCCTTTGGATCACTTCTATGCCGGCTCTGGCACGGCTGGAAACTTGTGGGTTTCAATCAGGCCGTCTCCCCAGACACCCACACCCCACGCCTGCCTGGCTTCCCACTGCAAACAAGGCTGGCCACC---CCCGGCACCAGCTCAGAAGCAAAGACCACTCCATGGGTTCTCAGACCTCACCCAGTGGGTGGCTCCTGTTGTGGCCCCAGCATTGCAGACATCACAGGCGGAGGCCTCTGTCCCTTCTCTGCCTCCCCACAGCTCAGCATTTATCTAGCTGGGCAGGGAGGGTCTGGACAAAACTGCAGTGGGAGAGGTCATGAATATCACC-TGGTTCATGTGCAGGCAAGCCCTGGTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1343874 542 + 1464242 AGTGA-GGGACAGGGCTGTGGCCAGGGCTTCTGTCTTTTCCCCACTCTCTGCTGGCATCTCCCCATCAGTCCTA-GGGAACCACAGATGCCTGCTGGCACCCAGTGATGTGTGGTGTCCTCCCTGTATCCT---------------GCAGGCAGCCTGGGGCCCATCTCCTGACTGCCGCACTGCCCACAAACTACTGTTGCCTTTGGATCACTTCTATGCCGGCTCTGGCACTGCTGGAAACTTGTGGGTTTGAATCAGGCCATCTCCCCAGACACCCACACCCCACGCCTGCCTGGCTTCCCACTGCAAACAAGGCTGGCCACCCCCCCCGGCACCAGCTCAGAAGCAAAGACCACTCCATGGGTTCTCAGACCTCACCCAGTGGGCGGCTTCTGTTGTGGCCCCAGCACTGCAGACATCACAGGCGGAGGCCTCTGTCCCTTCTCTGCCTCCCCACAGCTCAGCATTTATCTAGCTGAACAGGAAGGGTCTGGACAAAACTGCAGTGGGAGAGGTCATGAATATCACC-CAGTTCATGTGCAGGCAAGCCCTGGTTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1066107 541 + 81552678 GGTGA-GGGACAGGGCTGTGGCCAGGGCTTCTGTCTGTTCACCACTCTCTGCTGGCATCTCCCCATCAGTCCTAGGGGAACCACAGATGCCTGCTGGCATCCAGTGATGTGTGGTGGCCTCCCTGTATCCT---------------GCAGGCAGCCTGGGGCCCATCTCCTGACTGGTGCACTGCCCACAAACTACTGTTGCCTTTGGATCACTTCTATGCCGGCTCTGGCACTGCTGGAAACTTGTGGGTTTGAATCAAGCCGTCTCCCCAGACACCCACACCCCACGCCTGCCTGGCTTCCCACTGCAAACAACGCTGGCCACC--TCCCAGCACCAGCTCAGAAGCAAAGACCACTCCATGGGTTCTCAGACCTCACCCAGTGGGCGACTCCTGTTGTGGCCCCAGCATTGCAGACATCACAGGCGGAGGCCTCTGTCCCTTCTCTGCCTCCCCACAGCTCAGCATTTATCTAGCTGGACAGGGAGGGTCTGGGCAAAACTGCAGTGGGAGAGGTCATGAATATCACC-CGGTTCATGTGCAGGCCAGCCCTGGTTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1399748 557 + 108979918 GGAGA-GGGACAGGACTGTGGCCAGGGCCTCCGTCTGCCCCCCACTCTCTGCTGGCATCTCCCCATCAGTCCTAGGGGAACCACAGATGCCTGCTGGCACCCAGTGATGTGTGGTGGCCTCCCTGTGTCTGGCAGACATGGGGCAAGCAGGCAGCCTGGGGCCCATCTCCTGACTGCTGCGCTGCCCAGAAACTACTGTTGCCTTTGGGTCACTTCTATGCTGGCTCTGGCACCGCGGGAAGCTTGTGGGTTTGAATCAGGCCCTCTCCCCAGACACCCACACCCCACGTCCGCCTGGCTTCCCACTGCAAACAAGTCTGGCCACC--CCCAGGCACCAGCTCAGAAGCAAAGACCACTCCATGGGTTCTCAGACCTCACCCAGTGGGGGGCTCCTGCTGTGGCTCCAGCATTGCAGACAGCACAGGCGGAGGCCTCCGTCCCTTCTCTGCTTCCCAACAGCTCAGCATCTATCTAGTTGGGCAGGGAGGGTCTGGGCAAAACTGCAGTGGGAGAGGTCGGGAATATCACCTTGGTTCATGTGCAGGCCAGCCCTGGTTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1372073 556 - 111193037 GGAGA-GGGACAGGACTGTGGCCAGGGCCTCCGTCTGCCCCCCACTCTCTGCTGGCATCTCCCCATCAGTCCTAGGGGAACCACAGATGCCTGCTGGCACCCAGTGATGTGTGGTGGCCTCCCTGTGTCTGGCAGACATGGGGCAAGCAGGCAGCCTGGGGCCCATCTCCTGACTGCTGCGCTGCCCAGAAACTACTGTTGCCTTTGGGTCACTTCTATGCCGGCTCTGGCACCGCGGGAAGCTTGTGGGTTTGAATCAGGCCCTCTCCCCAGACACCCACACCCCACGTCCGCCTGGCTTCCCACTGCAAACAAGTCTGGCCACC--CCCAGGCACCAGCTCAGAAGCAAAGACCACTCCATGGGTTCTCAGACCTCACCCAGTGGGGGGCTCCTGCTGTGGCTCCAGCATTGCAGACAGCACAGGCGGAGGCCTCCGTCCCTTCTCTGCTTCCCAACAGCTCAGCATCTATCTAGTTGGGCAGGGAGGGTCTGGGCAAAACTGCAGTGGGAGAGGTCGGGAATATCACC-TGGTTCATGTGCAGGCCAGCCCTGGTTT i macFas5.chr13 C 0 M 330 s macNem1.NW_012011978v1 1400628 556 + 3644372 GGAGA-GGGACAGGACTGTGGCCAGGGCCTCCGTCTGCCCCCCACTCTCTGCTGGCATCTCCCCATCAGTCCTAGGGGAACCACAGATGCCTGCTGGCACCCAGTGATGTGTGGTGGCCTCCCTGTGTCTGGCAGACATGGGGCAAGCAGGCAGCCTGGGGCCCATCTCCTGACTGCTGCGCTGCCCAGAAACTACTGTTGCCTTTGGGTCACTTCTATGCCGGCTCTGGCACCGCGGGAAGCTTGTGGGTTTGAATCAGGCCCTCTCCCCAGACACCCACACCCCACGTCCGCCTGGCTTCCCACTGCAAACAAGTCTGGCCACC--CCCAGGCACCAGCTCAGAAGCAAAGACCACTCCATGGGTTCTCAGACCTCACCCAGTGGGGGGCTCCTGCTGTGGCTCCAGCATTGCAGACAGCACAGGCGGAGGCCTCCGTCCCTTCTCTGCTTCCCAACAGCTCAGCATCTATCTAGTTGGGCAGGGAGGGTCTGGGCAAAACTGCAGTGGGAGAGGTCGGGAATATCACC-TGGTTCATGTGCAGGCCAGCCCTGGTTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1354176 557 - 10304083 GGAGAGGGGACAGGACTGTGGCCAGGGCTTCCGTCTGCCCCTCACTCTCTGCTGGCATCTCCCCATCAGTCCTAGGGGAACCACAGATGCCTGCTGGCACCCAGTGACGTGTGGTGGCCTCCCTGTGTCCAGCAGACATGGGGCAAGCAGGCAGCCTGGGGCCCATCTCCTGACTGCTGCGCTGCCCAGAAACTGCTGTTGCCTTTGGGTCACTTCTCTGCCGGTTCTGGCACCGCGGGAAGCTTGTGGGTTTGAATCAGGCCGTCTCCCCAGACACCCACACCCCACGTCCGCCTGGCTTCCCACTGCAAACAAGTCTGGCCACC--CCCAGGCACCAGCTCAGAGGCAAAGACCACTCCATGGGTTCTCAGACCTCACCCAGTGGGGGGCTCCTGTTGTGGCTCCAGCATTGCAGACAGCACAGGCAGAGGCCTCCGTCCCTTCTCTGCTTCCCAACAGCTCAGCATCTATCTAGTTGGGCAGGGAGGGTCTGGGCAAAACTGCAGTGGGAGAGGTCAGGAATATCACC-TGGTTCATGTGCAGGCCAGCCCTGGTTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1427881 556 - 107702431 GGAGA-GGGACAGGACTGTGGCCAGGGCTTCCGTCTGCCCCCCACTCTCTGCTGGCATCTCCCCATCAGTCCTAGGGGAACCACAGATGCCTGCTGGCACCCAGTGACGTGTGGTGGCCTCCCTGTGTCCGGCAGACATGGGGCAAGCAGGCAGCCTGGGGCCCATCTCCTGACTGCTGCGCTGCCCAGAAACTACTGTTGCCTTTGGGTCACTTCTATGCCGGCTCTGGCACTGCGGGAAGCTTGTGGGTTTGAATCAGGCCTTCTCCCCAGACACCCACAGCCCACGTCCGCCTGGCTTCCCACTGCAAACAAGTCTGGCCACC--CCCAGGCACCAGCTCAGAAGCAAAGACCACTCCATGGATTCTCAGACCTCACCCAGTGGGGGGCTCCTGTTGTGGCTCCAGCATTGCAGACAGCACAGGCGGAGGCCTCCGTCCCTTCTCTGCTTCCCAACAGCTCAGCATCTATCTAGTTGGGCAGGGAGGGTCTGGGCAAAACTGCAGTGGGAGAGGTCAGGAATATCACC-TGGTTCATGTGCAGGCCAGCCCTGGTTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 902665 556 - 2200435 GGAGA-GGGACAGGACTGTGGCCAGGGCTTCCGTCTGCCCCCCACTCTCTGCTGGCATCTCCCCATCAGTCCTAGGGGAACCACAGATGCCTGCTGGCACCCAGTGACGTGTGGTGGCCTCCCTGTGTCCAGCAGACATGGGGCAAGCAGGCAGCCTGGGGCCCATCTCCTGACTGCTGCGCTGCCCAGAAACTACTGTTGCCTTGGGGTCACTTCTATGCCGGCTCTGGCACCACGGGAAGCTTGTGGGTTTGAATCAGGCCCTCTCCCCAGACACCCACACCCCACGTCCGCCTGGCTTCCCACTGCAAACAAGTCTGGCCACC--CCCAGGCACCAGCTCAGAAGCAAAGACCACTCCATGGGTTCTCAGACCTCACCCAGTGGGGGGCTCCTGTTGTGGCTCCAGCATTGCAGACAGCACAGGCAGAGGCCTCCATCCCTTCTCTGCTTCCCAACAGCTCAGCATCTATCTAGTTGGGCAGGGAGGGTCTGGGCAAAACTGCAGTGGGAGAGGTCAGGAATATCACC-TGGTTCATGTGCAGGCCAGCCCTGGTTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1336052 555 - 13651311 GGAGA-GGGACAGGACTGTGGCCAGGGCTTCCGTCTGCCCCCAATTCTCTGCTGGCATCTCCCCATCAGTCCTAGGGGAACCACAGATGCCTGCTGGCACCCAGTGATGTGTGGTGGCCTCCCTGTGTCCGGCAGACATGGGGCAAGCAGGTAGCCTGGGGCCCATCTCCTGACTGCTGAGCTGCCCAGAAACTACTGTTGCCTTTGGGTCACTTCTATGCCGGCTCTGGCACCGCTGGAAACTTGTGGGTTTGAATCAGGCCCTCTCCCCAGACACCCACACCCCACGTCCGCCTGGCTTCCCACTGCAAACAAGTCTGGCCACC--CCTAGGCACCAGCTCAGAAGCAAAGACCACTCCATGGGTTCTCAGACCTCACCCAGT-GGGGTCTCCTGTTGTGGCTCCAGCATTGCAGACAGCACAGGCAGAGGCCTCCGTCCCTTCTCTGCTTCCCAACAGCTCAGCATCTATCTAGTTGGGCAGGGAGGGTCTGGGCAAAACTGCAGTGGGAGAGGTCAGGAATATCACC-TGGTTCATGTGCAGGCCAGCCCTGGTTT i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 76991 684 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1196361 0 - 7082604 C e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 918339 10 + 5252280 I e dasNov3.JH576208 1659679 1059 + 4416731 I e calJac3.chr14 1346644 0 - 108792865 C a score=1163328.000000 s hg38.chr2_KI270774v1_alt 81880 261 + 223625 CCTCCTGCACCGCTTGCGTGGGGGTCTCTATCTCTGGCTTTGTGGGGGTGCCCTTCCCCCAAGGAAT---GGGGTGCTGGGGCCAAGGCTCTCCTTGCAG-CCCAGCTGAGGATTGCAGGGG-CCAGG------GAGTGCGGAGAAGGTGCCTGGAAGGTTGTGCCCCCTCACCTGCAGCCATGACCCAGGACTGACAGAGGGTGGGGGGCGCTGGCACCAAA-CTCCTTGAGCAGCCACTGCCAGGCCCCTGAGGAAGCTCCAGGCCCAGGA s panTro5.chr2A 1359477 262 + 111504155 CCTCCTGCACCGCTTGCGTGGGGGTCTCTATCTCTGGCTTTGTGGGGGTGCCCTTCCCCCAAGGAAT---GGGGTGCTGGGGCCAAGGCTCCCCTTGCAGCCCCAGCTGAGGATTGCAGGGG-CCAGG------GAGTGTGGAGAAGGTGCCTGGAAGGTTGTGCCCCCTCACCTGCAGCCATGACCCAGGACTGACAGAGGGTGGGGGGTGCTGGCACCAAA-CTCCTTGAGCAGCCACTGCCAGGCCCCTGAGGAAGCTCCAGGCCCAGGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1319626 262 + 114371477 CCTCCTGCACTGCTTGCGTGGGGGCCTCTATCTCTGGCTTTGTGGGGGTGCCCTTCCCCCAAGGAAT---GGGGTGCTGGGGCCAAGGCTCTCCTTGCAGCCCCAGCTGAGGATTGCAGGGG-CCAGG------GAGTGCGGAGAAGGTGCCTGGAAGGTTGTGCCCCCTCACCTGCAGCCATGACCCAGGACTGACAGAGGGTGGGGGGCGCTGGCACCAAA-CTCCTTGAGCAGCCACTGCCAGACCCCTGAGGAAGCTCCAGGCCCAGGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1344416 263 + 1464242 CCTCCTGCACCGCTCGCGTGGGGGTCTGTGTCTCTGGCTTTGTGGCGGTGTCCTTCCCCCAGGGAAT---GGGGTGCCAGGGCCAAGGCTCTCCTTGCAGCCCCAGCTGAGGATTGCAGGGG-CCAGG------GAGTGCGGAGAAAGTGTCTGGAAGGTTGTGCCCCCTCACTTGCAGCCATGACCCAGGACTAACAGAGGGTGGGGGGCGCTGGCACCAAAGCTCCTTGAGCAGCCACTGCCAGGCCCCTGCGAAAGCTCCAGGCCCAGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1066648 263 + 81552678 CCTCCTGCACCGCTCGCATGGGGGTCTCTGTCTTTGGTTTTGTGGGGGTGCCCTTTCCCCAAGGAAT---GGGGTGCTGCGGCCAAGGCTCTCCTTGCAGCCCCAGCTGAGGATTGTGGGGA-CCAGG------GAGTGCGGAGAAGGTGCCTGGAAGGTTGTGCCCCCTCACTTGCAGCCACGACCCAGGACTGACAGAGGGTGGCGGGTGCTGGCACCAAAGCTCCTTGAGCAGCCACTGCCAGGCCCCTGAGGAAGCTCCAGGCCCAGGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1400305 264 + 108979918 CCTCCTGTGCCGCTCGCATGGGGGTCTCTGTCTCTGGCTTTGTGGGGG-GCCATCCCCCCAGGGAAT---GGAGTGCT-GGGCCAAGTCTCTCCTTGTAGCCCCTGCTGAGGATTGC-GGGG-CAGGGAGTGCGGGGTGCGAAGAAGGTGCCTGGAAGGTTGTGCCGCCTCACCTACAGCCATGACCCAGGA-TGACAGAGGGT-GGGGGCGCTGGCACCGAAGCTCCTCGAGCAGCCACTGCCAGGCCCGTTCGGCAGCTCCAGGCCCAGGA i rheMac8.chr13 C 0 C 0 s macNem1.NW_012011978v1 1401184 268 + 3644372 CCTCCTGTGCCGCTCGCATGGGGGTCTCTGTCTCTGGCTTTGTGGGGGTGCCATTCCCCCAGGGAAT---GGAGTGCTGGGGCCAAGTCTCTCCTTGTAGCCCCTGCCGAGGATTGCGGGGG-CAGGGAGTGCGGAGTGCGAAGAAGGTGCCTGGAAGGTTGTGCCACCTCACCTACAGCCATGACCCAGGACTGACAGAGGGT-GGGGGCGCCGGCACCGAAGCTCCTTGAGCAGCCACTGCCAGGGCCCTTCGGCTGCTCCAGGCCCAGGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1354733 268 - 10304083 CCTCCTGTACCGCTTGCATGGGGGTCTCTGTCTCTGGCTTTGTGGGGGTGCCGTTCCCCCAGGGAAT---GGAGTGCTGGGGCCAAGTCTCTCCTTGTAGCCCCCGgtgaggattgcagggg-cagggagtgcggagtgcggagAAAGTGCCTGGAAGGTTGTGCCGCCTCACCTACAGCCATGACCCAGGACTGACAGAGGGT-GGGGGCGCTGGCACCGAAGCTCCTTGAGCAGCCACTGCCAGGCCCGTTCGGCAGCTCCCGGCCCAGGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1428437 271 - 107702431 CCTCCTGCACCGCTCGCATGGGGGTCTCTGTCTCTGGCTTTGTGGGGGTGCCCTTCCCCCAGGGAATGGAGGAGTGCTGGGGCCAGGTCTCTCCTTGTAGCCCCTGCTGAGGATTGCGGGGG-CAGGGAGTGCGGAGTGCGGAGAAGGTGCCTGGAAGGTTGTGCCGCCTCACCTACAGCCATGACCCAGGACTGACAGAGGGT-GGGGGCGCTGGCACCGAAGCTCCTTGAGCAGCCACTGCCAGGCCCCTTCGGCAGCTCCAGGCCCAGGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 903221 268 - 2200435 CCTCCTGTACCGCTCGAATGGGGGTCTCTGTCTCTGGCTTTGTGGGGGTGCCGTTCCCCCAGGGAAT---GGAGTGCTGGGGCCAAGTCTCTCCTTGTAGCCCCCGgtgaggattgcagggg-cagggagtgcggagtgcggagAAGGTGCCTGGAAGGTTGTGCCGCCTCACCTACAGCCATGACCCAGGACTGACAGAGGGT-GGGGGCGCTGGCACCGAAGCTCCTTGAGCAGCCACTGCCAGGCCCGTTCGGCAGCTCCAGGCCCAGGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1336607 270 - 13651311 CCTCCTGCACCGCTTACGTGGGGGTCTCTGTCTCTGGCTTTGTGGGGGTGCCCTTCCCCCAGGGAAT---GGGGTGCTGGGGCCAAGTCTCTCCTTGTAGCCCCTGCTGAGGATTGCAGGGGCCAAGGAGTGCAGAGTGTGGAGAAGGTGCCTGGAAGGTTGTGCCGCCTCACCTACAGCCATGACCCAGGACTGACAGAGGGTGGGGGGCGATGGCACCAAAGCTCCTTGAGCAGCCACTGCCAGGCCCCTTAGGCAGCTCCAGGCCCAGGA i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 76991 684 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1196361 0 - 7082604 C e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 918339 10 + 5252280 I e dasNov3.JH576208 1659679 1059 + 4416731 I e calJac3.chr14 1346644 0 - 108792865 C e macFas5.chr13 1372629 330 - 111193037 M a score=995409.000000 s hg38.chr2_KI270774v1_alt 82141 186 + 223625 GGCTGGGCTCTCCCTGCAGCCAGGCCCTCACCTCCTCTGCAAGCCACGCTCACATTCTCCTTTCCAGGAACCAGA-CCAGAGACATTTCTTCCC-TCTTCTGTTTCTTGGAGACCAGCCCCACCTTCCCTGCAGGTGCATTTCCCAGGTGGCGGCTGCAG---TTGTTTCTGCAGGACAGGACTCTGGGTT s panTro5.chr2A 1359739 186 + 111504155 GGCTGGGCTCTCCCTGCAGCCAGGCCCTCACCTCCTCTGCAAGCCACACTCACATTCTCCTTTCCAGGAACCAGA-CCAGAGACATTTCTTCCC-TCTTCTGTTTCTTGGGGACCAGCCCCACCTTCCCTGCAGGTGCATTTCCCAGGTGGCGGCTGCAG---TTGTTTCTGCAGGACAGGACTCTGGGTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1319888 186 + 114371477 GGCTGGGCTCTCCCTGCAGCCAGGCCCTCACCTCCTCTGCAAGCCACGCTCACATTCTCCTTTCCAGGAACCAGA-CCAGAGACATTTCTTCCC-TCTTCTGTTTCTTGGAGACCAGCCCCACCTTCCCTGCAGGTGCATTTCCCAGGTGGCGGCTGCAG---TTGTTTCTGCAGGACAGGACTCTGGGTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1344679 184 + 1464242 GTATGAGCTCTCCCTGCAGCCAGGCCCTCACCTCCTCTGCAAGCCATGCTCACATTCTGCTTTCCAGGAACCAGA-CCAGAGACATTTCTTCCC-TCTTCTGTTTCTTGGAGACCAGCCCCACCCTCCCTGCAGGTGCATTTCCCAGGTGGCGGCTGCAG---TTGTTTCTGCAGGACAGGA--CTGGGTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1066911 185 + 81552678 GGCTGGGCTGTCCCTGCAGCCAGGCCCTCACCTCCTCTGCAAGCCTCGCTCACATTCCGCTTTCCAGGAACCAGA-CCAGAGACATTTCTTCCCTTCTTCTGTTTCTTGGAGACCAGCCCCACCCTCCCTGCAGGTGCATTTCCCAGGTGGTGTCTGCAG---TTGTTTCTGTAGGACAGGA--CTGGGTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1400569 175 + 108979918 GCCTGGGGTCTCCCTGCAGCCAGG-CCTCGCCTCCTCTGCAAGCCACGCTCA---------TTCCAGGAACCAGACCCAGAGACATTTCTTCCCTTCTTCTGTTTCTTGGAGACCAGCCCCACCCTCCCTGC-GGTGCATTTCCCAGGT-GCGTCTGCAGCTGTTGTTTCTG--AGACAGGA--CTGGGTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1372959 188 - 111193037 GGCTGGGCTCTGCCTGCAGCCAGGCCCTCACCTCCTCTGCAAGCCACGCTCACATTCCGCTTTCCAGGAACCAGA-CCAGAGACATTTCTTCCCTTCTTCTGTTTCTTGGAGACCAGCCCCACCCTCCCTGCAGGTGCATTTCCCAGGTGGCGTCTGCAGCTGTTGTTTCTGCAGGACAGGA--CTGGGTT i macFas5.chr13 M 330 C 0 s macNem1.NW_012011978v1 1401452 185 + 3644372 GGCTGGGCTCTGCCGGCAGCCAGGCCCTCACCTCCTCTGCAAGCCACGCTCACATTCCGCTTTCCAGGAACCAGA-CCAGAGACATTTCTTCC---CTTCTGTTTCTTGGAGACCAGCCCCACCCTCCCTGCAGGTGCATTTCCCTGGTGGCGTCTGCAGCTGTTGTTTCTGCAGGACAGGA--CTGGGTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1355001 188 - 10304083 GGCTGGGCTCTCCCTGCAGCCAGGCCCTCACCTCCTCTGCAAGCCACGCTCACATTCCGCTTTCCAGGAACCAGA-CCAGAGACATTTCTTCCCTCCTTCTGTTTCCTGGAGACCAGCCCCACCCTCCCTGCAGGTGCATTTCCCAGGTGGCGTCTGCAGCTGTTGTTTCTGTGGGACAGGA--CTGGGTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1428708 188 - 107702431 GGCTGGGCTCTCCCTGCAGCCAGGCCCTCACCTTCTCTGCAAGCCACGCTCACATTCCGCTTTCCAGGAACCAGA-CCAGAGACATTTCTTCCCTTCTTCTGTTTCTTGCAGACCAGCCCCACCCTCCCTGTAGGTGCATTTCCGAGGTGGCGTCTGCAGCTATTGTTTCTGCAGGACAAGA--CTGGGTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 903489 188 - 2200435 GGCTGGGCTCTCCCTGCAGCCAGGCCCTCGCCTCCTCTGCAAGCCACGCTCACATTCCGCTTTCCAGGAACCAGA-CCAGAGACATTTCTTCCCTTCTGCTGTTTCCTAGAGACCAGCCCCACCCTCCCTGCAGGTGCAGTTCCCAGGTGGCATCTGCAGCTGTTGTTTCTGCAGGACAGGA--CTGGGTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1336877 188 - 13651311 GGCTGGACTCTCCCTGCAGCCAGGCCCTCACCTCCTCTGCAAGCCATGCTCACATTCCGCTTTCCAGGAACCAGA-TCAGAGACATTTCTTCCCTTCTTCTATTTCTTGGAGACCAGCCCCACCCTCCCTGCAGGTGCATTTCCTAGGTGGCGTCTGCAGCTGCTGTTTCTGCAGGACAGGA--CTGGGTT i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 76991 684 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1196361 0 - 7082604 C e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 918339 10 + 5252280 I e dasNov3.JH576208 1659679 1059 + 4416731 I e calJac3.chr14 1346644 0 - 108792865 C a score=4773347.000000 s hg38.chr2_KI270774v1_alt 82327 849 + 223625 CACCCATGCCCTCCT-CTGTTCAGCCATCCCTCCCTTGTCTGCCCCAGGTGAGTCCT-CATGAAATGTCCAGCCC---CCCCGAGGGAGGCAGAGCCACGTGCT-CTCCAAGCCCTCCTGGGCATCATCACCAGATTGCATTTTCTGCGCGGAGCTTCTCCAGCAGCATCAGCAGCCTGACGATGGGCTTCCAACTCTGGCCTTTCCAATAcagcagcccccttatccaa--aggagaatctttccaagaccccagtggacacctgaagccatggagagaacaagtcct----atgtatgctgtgttttcctac--acacatacccacggtgaagcttagtttataaattaggcatagtaaga---gatccaccataactgataataaaacagaacaattataacaatacccagaat---------gatgcatgatttaaaaccgatgagttgtttatttctggaatttttcatgtaatattttcagactgaggttaaccacagggaactgaaactgcagaaagcaaatctgaagatcagaggCCCT------------------------------GTTGCCCACCCTTTCCATCTCTGCAGATCTCCAGTGC-CTCGGGAGCCTCTCCCATCCCAGGGCCTGGGGCTCCTGCCTCCTCCCCATGTGGCCTCAATCTGCCTTCCTTGCATGAATTTCTCTGAAGGACACCTGTCTTCACTCACTCACACCTCTCTAGGAGCACCAGGTTCTGCAAATAGGAACAAGGCACATCAACGGGTGCACAGGAAAATCC--TTACATGGAAAT-CTTACTTGTTATTTGACATTCATGTTTAGGTGAGTGTCCTGCATTTTACTGGTAGCCCCACTTAATGGGAGCTGCCACCCATGGCCGCCACCCTTCCCT s panTro5.chr2A 1359925 852 + 111504155 CACCCATGCCCTCCT-CTGTTCAGCCATCCCTCCCTTGTCTGCCCCAGGTGAGTCCT-CATGAAATGTCCAGCCCCCACCCCGAGGGAGGCAGAGCCACGTGCT-CTCCAAGCCCTCCTGGGCATCATCACCAGATTGCATTTTCTGCACGGAGCTTCTTCAGCAGCATCAGCAGCCTGACGATGGGCTTCCAACTCTGGCCTTTCCAATAcagcagcccccttatccaa--aggagaatctttccaagaccccagtggacacctgaagccatggagagaacaagtcct----atgtatgctgtgttttcctac--acacatacccacggtgaagcttagtttataaattaggcacagtaaga---gatccaccataactgataataaaacagaacaattataacaatacccagaat---------gatgcatgatttaaaaccgatgagttgtttatttctggaatttttcatgtaatattttcagactgaggttaaccacagggaactgtaactgcagaaagcaaatctgaagatcagaggCCCT------------------------------GTTGCCCACCCTTTCCATCTCTGCAGATCTCCAGTGC-CTCGGGAGCCTCTCCCATTCCAGGGCCTGGGGCTTCTGCCTCCTCCCCATGTGGCCTCAATCTGCCTTCCTTGCATGAATTTTTCTGAAGGACACCTGTCTTCACTCACTCACACCTCTCTAGGAGCACCAGGTTCTGCAAATAGGAATAAGGCACATCAACGGGTGCACAAGAAAATCC--TTACATGGAAAT-CTTATTTGTTATTTGACATTCATGTTTAGGTGAGTGTCCTGCATTTTACCGGTAGCCCCACTTAATGGGAGCTGCCACCCATGGCCGCCACCCTTCCCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1320074 843 + 114371477 TACCCATGCCCTCCT-CTGTTCAGCCATCCCTCCCTTGTCTGCCCCAGGTGAGTCCT-CATGAAATGTCCAGCC----CCCCGAGGGAGGCAGAGCCACGTGCT-CTCCAAGCCCTCCTGGGCATCATCACCAGATTGCATTTTCTGCGCGGAGCTTCTCCAGCAGCATCAGCAGCCTGACGATGGGCTTCCAACTCTGGCCTTTCCAATAcagcagcccccttatccaa--aggagaatctttccaagaccccagtggacacctgaagccatggagagaacgaatcct----atgtatgctgtgttttcctac--acacatacccacggtgaagcttagtttataaattaggcacagtaaga---gatccaccataactgataat-----agaacaattataacaatacccagaat---------gatgcatgatttaaaactgatgagttgtttatttctggaatttttcatgtaatattttcagactgaggttaaccacaggaaactgaaactgcagaaagcaaatctgaagatcagaggCCCT------------------------------GTTGCCCACCCTTTCCATCTCTGCAGATCTCCAGTGC-CTCGGGAGCCTCTCCCATCCCAGGGCCTGGGGCTCCTGCCTCCTCCCCATGTGGCCTCAATCTGCCTTCCTTGCATGAATTTCTCTGAAGGACACCTGTCTTCACTCACTCACACCTCTCTAGGAGCACCAGGTTCTGCAAATAGGAATAAGGCACATCAACGGGTGCACAAGAAAATCC--TTACATGGAAAT-CTTATTTGTTATTTGACATTCATGTTTAGGTGAGTGTCCTGCATTTTACCGGTAGCCCCACTTAATGGGAGCTGCCACCCATGGCCGCCACCCTTCCCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1344863 848 + 1464242 CACCCATGCCCTCCT-CTGTTCAGCCATCCCTCCCTTATCTGCCCCAGGTGAGTCCT-CATGAAATGTCCAGCCT---CCCCGAGGGAGGCAGAACCCTGTGCT-CTCCAAGCCCTCCTGGGCATCATCACCAGATTGCATCTTCTGCACGGAGCTTCTCCAGCAGCATCAGCAGCCTGACGACGGGCTTCCAACTCTGGCCTTTCCAATAcagcagcccccttatccaa--gggagaatctttccaagaccccagtggacacctgaagccgtggagagaacgaatcct----atgtatgctgtgttttcctac--acacatacccacggtgaagcttagtttataaattaggcacagtaagg---gatccaccataactgataataaaacagaacaattataacaatacccagaat---------gatgcatgatttaaaacccatgagttgtttatttctggaatttttcatgtaatattttcagactgaggttaaccacagggaaccgaaactgcagaaagcaaatctgaagatcagaggCCCT------------------------------GTTGCCCACCCTTTCCATCTCTGCAGATCTCCAGTGC-CTC-GGAGCCTCTCCCATCCCAGGGCCTGGGGCTTCTGCCTCCTCCCCATGTGGCCTCAATCTGCCTTCCTTGCATGAATTTCTCTGAAGGACACCTGTCTTCACTCACTCACACCTCTCTAGGAGCACCAGGTTCTGCAAATAGGAATACGGCACATCAACGGGtgcacaagactatcc--ttacacggaaat-cttacttgttatttgaaattcatgtttaggcgagtgtcctgcattttaccggtagccccaCTTAATGAGAGCTGCCACCCATGGCCGCCACCCTTCCCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1067096 848 + 81552678 CACCCATGCCCTCCT-CTGTTCAGCCATCCCTCCCTTGTCTGCCCCAGGCGAGTCCT-CATGAAATGTCCAGCCT---CCCCAAGGGAGGCACAGCCACGCACT-CTCCAAGCCCTCCTGGG---CATCACCAGATTGCATTTTCCCCACGGAGCTCCTCCAGCAGCATCAGCAGCCTGACGATGGGCTTCCAACTCTGGCCTTTCCAATAcagcagcccccttaccaga--gggagaatctttccaagaccccagtggacacccaaagctgcagagagaacgaatcct----atgtatgctgtgttttcctacatacacatacccacggtgaagtttagtttataaactaagcacagtaagg---gatccaccataactgataataaaatagaacaattataacaatacccagaat---------gatgcatgatttaaaacccatgagttgtttatttctggaatttttcatttaatattttcagactgaggttaaccacagggagctgaaactgcagaaagcaaaTCTTAAGTTCAGAGGCCCT------------------------------GCTGCCCACCCTTTCCGTCTCGGCAGATCCCAAGCAC-CTCGGGAGCCTCTCCCATCCCAGGGCCTGGGGCTCCTGCCTCCTCCCCATGTGGCCTCAATCTGCCTTCCTCGCATGAATTTCTCTGAAGGACACCTGTCTTCACTTACTCACACCTCTCTAGGAGCACCAGGTTCTGCAAATAGGAATAAGGCACATCAATGGGtgcacaaggcaatcc--ttacactgaaat-cttatttgttatttgaaattcacatttaggtgagcgtcctgcattttaccagtagccccaCCTAATGGGAGCTGCCACCCATGGCCACCACCCTTCCCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1400744 851 + 108979918 CACCCATGCCCTCCTCCTGTTCAGCCATCCCTCCCTCGTCGGCCCCA-GCGAGTCCTCCATGAAATGTCCAGCCT---CCCCGAGGGAGGCACAGCCACGCGCT-CTCCAAGCCCTCCTGGGCATCATCACCAGACTGCGTTTTCTGTGTGGAGCTTCTCGAGCAGCATCAGCAGCCTGACGACGGGCGTCCGACTCTGGCCTTTCCAATAGAGCAG-ccccttatccaa--gggagagtctttccaagaccccagtggacacctgaagccgcggagagaacgaatcct----atgtatgctgtgtttgcct----acacacacccgcggtaaagtttagtttataaattaggcacagtaaggcttgatcacccataactgataataaaatagaataattataacgatacccagaat---------ggtgtgtgatttaaaa-ccacgaattgtttatttctggaatttttcatttaatattttcagactgaggttaaccacagggaactgaaactgcagaaagcaaatctgaagatcagaggCCCT------------------------------GCTGCCCGCCCTTTCCGTCTCGGCAGATCCCCAGCGC-CTCGGGAGCCTCTCCCATCGCAGGGCCTGGGGCTCCTGCCTCCTCCCCACGCGTCCTCAGTCCGCCTTCCTCGAATGAATTTCTCTGAACGACACCTGCCTTCACTCACTCACATCTCTCTAGGAGCACCAGGTTCTGCAAATAGAAATACAGCACGCCAATGGGTGTGCAAGACAATCCTTTTACACTGGAAT-CTTATTTGTTATTTGAAATTCACGTTTAGGTGAATGTCCTGCATTTTACCAGTAGCCCCACCTAATGGGAGCTGCCACCCAAGGCCACCACCCTTTCCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1373147 850 - 111193037 CACCCATGCCCTCCT-CTGTTCAGCCATCCCTCCCTCGTCTGCCCCAGGCGAGTCCT-CATGAAATGTCCAGCCT---CCCCGAGGGAGGCACAGCCACGCGCT-CTCCAAGCCCTCCTGGGCATCATCACCAGACTGCGTTTTCTGTGTGGAGCTTCTCGAGCAGCATCAGCAGCCTGACGACGGGCGTCCGACTCTGGCCTTTCCAATAGAGCAG-ccccttatccaa--gggagagtctttccaagaccccagtggacacctgaagccgcggagagaacgaatcct----atgtatgctgtgtttgcct----acacacacccgcggtaaagtttagtttataaattaggcacagtaaggcttgatcacccataactgataataaaatagaataattataacgatacccagaat---------ggtgtgtgatttaaaa-ccacgaattgtttatttctggaatttttcatttaatattttcagactgaggttaaccacagggaactgaaactgcagaaagcaaatctgaagatcagaggCCCT------------------------------GCTGCCCGCCCTTTCCGTCTCGGCAGATCCCCAGCGC-CTCGGGAGCCTCTCCCATCGCAGGGCCTGGGGCTCCTGCCTCCTCCCCACACGTCCTCAGTCCGCCTTCCTCGAATGAATTTCTCTGAATGACACCTGCCTTCACTCACTCACATCTCTCTAGGAGCACCAGGTTCTGCAAATAGAAATACAGCACGTCAATGGGTGTGCAAGGCAATCCTTTTACACTGGGAT-CTTATTTGTTATTTGAAATTCACGTTTAGGTGAGTGTCCTGCATTTTACCAGTAGCCCCACCTAATGGGAGCTGCCACCCAAGGCCACCGCCCTTTCCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1401637 850 + 3644372 CACCCATGCCCTCCT-CTGTTCAGCCATCCCTCCCTCGTCTGCCCCAGGCGAGTCCT-CATGAAATGTCCAGCCT---CCCCGAGGGAGGCACAGCCACGCGCT-CTCCAAGCCCTCCTGGGCATCATCACCAGACTGCGTTTTCTGTGTGGAGCTTCTCGAGCAGCATCAGCAGCCTGACGACGGGCGTCCGACTCTGGCCTTTCCAATAGAGCAG-ccccttatccaa--gggagagtctttccaagaccccagtggacacctgaagccgcggagagaacgaatcct----atgtatgctgtgtttgcct----acacacacccgcggtaaagtttagtttataaattaggcacagtaaggcttgatcacccataactgataataaaatagaataattataacgatacccagaat---------ggtgtgtgatttaaaa-ccacgaattgtttatttctggaattttttatttaatattttcagactgaggttaaccacagggaactgaaactgcagaaagcaaatctgaagatcagaggCCCT------------------------------GCTGCCCGCCCTTTCCGTCTCGGCAGATCCCCAGCGC-CTCGGGAGCCTCTCCCATTGCAGGGCCTGGGGCTCCTGCCTCCTACCCACACATCCTCAGTCCGCCTTCCTCGAATGAATTTCTCTGAACGACACCTGCCTTCACTCACTCACATCTCTCTAGGAGCACCAGGTTCTGCAAATAGAAATACAGCACGCCAATGGGTGTGCAAGACAATCCTTttacactggaat-cttatttgttatttgaaattcacgtttaggtgagtgtcctgcattttaccagtagccccaCCTAATGGGAGCTGCCACCCAAGGCCACCACCCTTTCCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1355189 879 - 10304083 CACCCATGCCCTCCT-CTGTTCAGCCATCCCTCCCTCGTCTGCCCCAGGCGAGTCCT-CATGAAATGTCCAGCCT---TCCCGAGGGAGGCACAGCCACGCGCT-CTCCAAGCCCTCCTGGGCATCATCACCAGACTGCGTTTTCTGTGTGGAGCTTCTCGAGCAGCATCAGCAGCCTGACGACGGGCGTCCGACTCTGGCCTTTCCAATAGAGCAG-ccccttatccaa--gggacagtctttccaagaccccagtggacacctgaagccgcggagagaacgaatcct----atgtatgctgtgtttgcct----gcacacacccgcggtaaagttcagtttataaattaggcacagtaaggcttgatcacccataactgataataaaatagaataattataacgatacccagaat---------ggtgtgtgatttaaaacccacgaattgtttatttctggaatttttcatttaatattttcagactgaggttaaccacagggaactgaaactgcagaaaacaaatctgaagatcagaggCCCTGCTGCCCGCCCTTTCCGTCTCGGCAGATCCGCTGCCCGCCCTTTCCGTCTCGGCAGATCCCCAGCGC-CTCGGGAGCCTCTCCCATCGCAGGGCCTGGGGCTCCTGCCTCCTCCCCACACGGCCTCAGTCTGCCTTGCTTGAATGAATTTCTCTGAACGACACCTGCCTTCACTCACTCACATCTCTCTAGGAGCACCAGGTTCTGCAAATAGAAATACAGCACGTCAATGGGTGTGCCAGACAATCC--TTACACTGAGAT-CTTATTTGTTATTTGAAATCCATGTTTAGGTGAGTGTCCTGCATTTTACCAGTAGCCCCACCTAATGGCAGCTGCCACCCAAGGCCACCACCCTTTCCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1428896 846 - 107702431 CACCCATGCCCTCCT-CTGTTCAGCCATCCCTCCCTCGTCTACCCCAGGCAAGTCCT-CATGAAATGTCCAGCCG---CCCCGAGGGAGGCACAGCCACGCGCT-CTCCAAGCCCTCCTGGGCATCATCACCAGACTGCGTTTTCTGTGTGGAGCTTCTCGAGCAGCATCAGCAGCCTGAGGACGGGCGTCCGACTCTGGCCTTTCCAATGCAGCAG-ccccttatacaa--gggacagtctttccaagaccccagtggacacctgaagccgcggagagaacgaatcct----atgtatgctgtgttttccc----acacacacccgcagtaaagtttagtttacaaattaggcacagtaagg---gatcacccataactgataataaaatagaataattataacgatacccagaat---------ggtgtgtgatttaaaacccacgaattgtttatttctgcaatttttcatttaatattttcagactgaggttaaccacagggaactgaaactgcagaaagcaaatctgaagatcagaggCCCT------------------------------GCTGCCCGCCCTTTCGGTCTCGGCAGATCCCCAGCGC-CCGGGGAGCCTCTCCCATCGCAGGGCCTGGGGCTCCTGCCTCCTCCCCACACGGCCTCAGTCTGCCTTGCTTGAATGAATTTCTCTGAACGACACCTGTCTTCACTCACTCACATCTCTCTAGGAGCACCAGGTTCTGCAAATAGAAATACAGCACATCAACGGGTGTGCAAGACAatcc--ttacactgaaat-cttatttgttatttgaaattcatgtttaggtgagtgtcctgcattttaccagtagccccaCCTAATGGGAGCTGCCACCCAAGGCCACCACCCTCTCCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 903677 848 - 2200435 CACCCATGCCCTCCT-CTGTTCAGCCATCCCTCCCTCGTCTGCCCCAGGCGAGTCCT-TATGAAATGTCCAGCCT---CCCCGAGGGAGGCACAGCCACGCGCT-CTCCAAGCCCTCCTGGGCATCATCACCAGACTGCGTTTTCTGTGTGGAGCTTCTCGAGCAGCATCAGCAGCCTGACGACGGGCGTCCGACTCTGGCCTTTCCAATGCAGCAG--cccttatccaa--gggacagtcttcccaagaccccagtggacagctgaagccgcggagagaacgaatcct----atgtatgctgtgtttgcct----acacacacccgcggtaaagttcagtttataaattaggcacagtaaggcttgatcacccataactgataataaaatagaataattataacgatacccagaat---------ggtgtgtgatttaaaacccacgaattgtttatttctggaatgtttcatttaatattttcagactgaggttaaccacagggaactgaaactgcagaaagcaaatctgaagatcagaggCCCT------------------------------GCTGCCTGCCCTTTCCGTCTCGGCAGATCCCCAGCGC-CTCGGGAGCCTCTCCCATCGCAGGGCCTGGGGCTCCTGCCTCCTCCCCACACGGCCTCAGTCTGCCTTGCTTGAATGAATTTCTCTGGACGACACCTGCCTTCACTCACTCACATCTCTCTGGGAGCACCAGGTTCTGCAAATAGAAATACAGCACGTCAACGGGTGTGCAAGACAATCC--TTACACTGAAAT-CTTATTTGTTATTTGAAATCCATGTTTAGGTGAGTGTCCTGCATTTTACCAGTAGCCCCACCTAATGGGAGCTGCCACCCAAGGCCACCACCCTTTCCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1337065 851 - 13651311 CAACCATGCCCTCTT-CTGTTCAGCCATCCCTCCCTCGTCTGCCCCAGGCGAATCCT-CATGAAATGTCCAGCCT---CCCCGAGGGAGGCACAGCCATGTGCT-CTCCATGCCCTCCTGGGCATCATCACCAGACTGCATTTTCTGTGTGGAGCTTCTCCAGCAGCATCAGCAGCCTGACCATGGGCGTCCAACTCTGGCCTTTCCAATAcagcagcccccttatccaa--gggagagtctttctgagaccccagtggacacctgaagccgcggagagaacgaattct----atgtatgctgtgtgttcctacacacacacacccgcggtaaagtttagtttataaattaggcacagtaagg---gatcacccataactgataataaaatagaataattataacgatacccagaat---------ggtgcatgatttaaaacccacgaattgtttatttccggaatttttcatttactgttttcagactgaggttaaccacagggaactgaaactgcagaaagcaaatctgaagatcagaggCCCT------------------------------GCTGCCCACTCTTTCCGTCTCGGCAGATCCCCAGTGC-CTCGGGAGCCTCTCCCATCGCAGGGCCTGGGGCTCCTGCCTCCTCCCCACACGGCCTCAGTCTGCCTTCCTTGAATGAATTTCTCTGAACGACACCTGTCTTCACTCACTCACATCTCTCTAGGAGCACCAGGTTCTGCAAATAGAAATACAGCACATCAACGGGTGTGCAAGACAatcc--ttacactgaaat-cttacttgttatttgaaattcatgtttaggtgagtgtcctgcattttaccagtagccccaCCTAATGGGAGCTGCCACCCAAGGCCACCACCCTTTCCT i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 918349 692 + 5252280 CACACTTACCGCTCT-CTGCCCCAGCTACCCTCCCTTGTCGGCCCCACTCTGGTCTA-CGCAAAACGTCCAACAT------------------GGCCCCTCTTTGCTCAGAGCTCTCGTGGGCTTC-CAGCCAGATGG----TTCCAGGTATGGCTTCTCCACC-------------------CCAGCCTCCAACTC-AGCCTGTCCAGTGCAG----Tccctggtccacatgggataagttccctgacctcctggaggataccc-agtcctctgagagtactggccatgcacacacatgctatcttttccc----------------tatgacatttaatttgtaaaataggaacaataagg---gattaacaacag-tactaataacatagaacacttataacaatatTCAGAACAATATTGAGAATATgcaattcagaacttatgaagtatttatttctggaattttccatgtactatttCTACTTT------------------CTGAAACTGTGGGTAGACA--------------------------------------------------GCTGCTCACCCTGTCAG-CTGAACAGG-CTCCAGTGCTCTCTGAGACCTCATCTGCCCCAACACCTGGTGC--CTGCCTCCCC----------------TGGCCCTCCTG-----------TCTG---GACACTTGTCTTCCC--------------------ACACCAGGTTCTGCCAACACAAGCACAGC-CAccaaatagtgcat-ggaaaatac--ttagccagaagtatttacttgctgtctgaagttcaggatgacctgagtgtcctgcatgtcatcACT-GCCCAACCTGGTGG-------CACCTAAAACC------------- i otoGar3.GL873658 I 10 C 0 e aotNan1.NW_018513311v1 76991 684 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1196361 0 - 7082604 C e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e dasNov3.JH576208 1659679 1059 + 4416731 I e calJac3.chr14 1346644 0 - 108792865 C a score=534553.000000 s hg38.chr2_KI270774v1_alt 83176 79 + 223625 CTTCTCCAGCCAGACG-CCCCTGGGCTCTCTTCC--CCTTCCCAGTGTGGACATTCTTGA---CCTTTATT-TTCAGCCCTCATGT s panTro5.chr2A 1360777 79 + 111504155 ATTCTCCAGCCAGACG-CCCCTGGGCTCTCTTCC--CCTTCCCAGTGTGGACATTCTTGA---CCTTTATT-TTCAGCCCTCATGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1320917 79 + 114371477 CTTCTCCAGCCAGACG-CCCCTGGGCTCTCTTCC--CCTTCCCAGTGTGGACATTCTTGA---CCTTTATT-TTCAGCCCTCATGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1345711 80 + 1464242 CTTCTCCAGCCAGACGCCCCCTGGGCTCTCTTCC--CCTTCCCAGTGTGGACATTCTTGA---CCTTTATT-TTCAGCCCTCATGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1067944 79 + 81552678 CTTCTCCAGCCGGACG-CCCCTGGGCTCTCTTCC--CCTTCCCAGTGTGGACATTCTTGA---CCTTTATT-TTCAGCCCTCATGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1401595 79 + 108979918 CTTCTCCAGCCAGACG-CCCCTGGGCTCTCTTCC--CCTTCCCAGTGTGAACATTCTTGA---CCTTTATT-TTCAGCCCTCATGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1373997 79 - 111193037 CTTCTCCAGCCAGACG-CCCCTGGGCTCTCTTCC--CCTTCCCAGTGTGAACATTCTCGA---CCTTTATT-TTCAGCCCTCACGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1402487 79 + 3644372 CTTCTCCAGCCAGACG-CCCCTGGGCTCTCTTCC--CCTTCCCAGTGTGAACATTCTTGA---CCTTTATT-TTCAGCCCTCATGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1356068 79 - 10304083 CTTCTCCAGCCAGACG-CCCCTGGGCTCTCTTCC--CCTTCCCAGTGTGAACATTCTTGA---CCTTTATT-TTCAGCCCTCATGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1429742 79 - 107702431 CTTCTCCAGCCAGACG-CCCCTGGGCTCTCTTCC--CCTTCCCAGTGTGAACATTCTTGA---CCTTTATT-TTCAGCCCTCATAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 904525 79 - 2200435 CTTCTCCAGCCAGACG-CCCCTGGGCTCTCTTCC--CCTTCCCAGTGTGAACATTCTTGA---CCTTTATT-TTCAGCCCTCATGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1337916 79 - 13651311 CTTCTCCAGCCAGACG-CCCCTGGGCTCTCTTCC--CCTTCCCAGTGTGAACATTCTTGA---CCTTTATT-TTCAGCCCTCATGT i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 919041 65 + 5252280 -------------AAG-CACAAGGGGCCTTCCCT--CCCTCCCAGTTTGGATGCTCTTGAATGCCTCTGTCATCCTGCCC-----T i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1660738 81 + 4416731 CTTCTCCAGCTAGACG-TTCACTTGCTTTCTCCCCGCTTTCCTGGCTTGGACATTCTTGA---CATTTATT-TTTACCCTTCTTAC i dasNov3.JH576208 I 1059 C 0 e aotNan1.NW_018513311v1 76991 684 + 287728 I e mm10.chr12 89962715 21660 - 120129022 I e saiBol1.JH378218 1196361 0 - 7082604 C e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e calJac3.chr14 1346644 0 - 108792865 C a score=137091.000000 s hg38.chr2_KI270774v1_alt 83255 23 + 223625 GGCACTGTCCCTGTCTATTTTCT s panTro5.chr2A 1360856 23 + 111504155 GGCACTGTCCCTGTCTATTTTCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1320996 23 + 114371477 GGCACTGTCCCTGTCTATTTTCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1345791 22 + 1464242 GGCACTGTCCCTGTCT-TTTTCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1068023 23 + 81552678 GGCATTGTCCCTGTCTACTTTCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1401674 23 + 108979918 GGCACTGTCCCTGTCTGCTTTCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1374076 23 - 111193037 GGCACTGTCCCTGTCTGCTTTCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1402566 23 + 3644372 GGCACTGTCCCTGTCTACTTTCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1356147 23 - 10304083 GGCACTGTCCCTGTCTACTTTCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1429821 23 - 107702431 GGCACTGTCCCTGTCTACTTTCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 904604 23 - 2200435 GGCACTGTCCCTGTGTACTTTCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1337995 23 - 13651311 GGTACTGTCCCTGTCTACTTTCT i colAng1.NW_012118821v1 C 0 M 2480 s otoGar3.GL873658 919106 22 + 5252280 GGTTCTGTCCCTCTCTACTGAT- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89984375 23 - 120129022 GGCACTTTCCTCCTCTTCCTTCT i mm10.chr12 I 21660 C 0 s dasNov3.JH576208 1660819 7 + 4416731 GACACTC---------------- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 76991 684 + 287728 I e saiBol1.JH378218 1196361 0 - 7082604 C e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e calJac3.chr14 1346644 0 - 108792865 C a score=308198.000000 s hg38.chr2_KI270774v1_alt 83278 56 + 223625 GCAGTAGCTTCTTGCATTTAGAAAAAATTATGTTTGAAATGTTATTATCAAAGATA s panTro5.chr2A 1360879 56 + 111504155 GCAGTAGCTTCTTGCATTTAGAAAAAATTATGTTTGAAATGTTATTATCAAAGATA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1321019 56 + 114371477 GCAGTAGCTTCTTGCATTTAGAAAAAATTATGTTTGAAATGTTATTATGAAAGATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1345813 56 + 1464242 GCAGTAGCTTCTTGCATTTAGAAAAAATTATGTTTGAAATGTTATTATCAAAGAAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1068046 55 + 81552678 GCAGTAGCTTCTTACATTTAG-AAAAATTATGTTTGAAATGTTATTATCAAACATA i nomLeu3.chr19 C 0 I 1 s rheMac8.chr13 1401697 55 + 108979918 GCAGTAGCTTCTTACATTTAG-AAAAATTATGTTTGAAATGTTATTATCAAAGATA i rheMac8.chr13 C 0 I 1 s macFas5.chr13 1374099 55 - 111193037 GCAGTAGCTTCTTACATTTAG-AAAAATTATGTTTGAAATGTTATTATCAAAGATA i macFas5.chr13 C 0 I 1 s macNem1.NW_012011978v1 1402589 55 + 3644372 GCAGTAGCTTCTTACATTTAG-AAAAATTATGTTTGAAATGTTATTATCAAAGATA i macNem1.NW_012011978v1 C 0 I 1 s cerAty1.NW_012000820v1 1356170 55 - 10304083 GCAGTAGCTTCTTACATTTAG-AAAAATTATGTTTGAAATGTTATTATCAAAGATA i cerAty1.NW_012000820v1 C 0 I 1 s chlSab2.chr14 1429844 55 - 107702431 GCAGTAGCTTCTTACATTTAG-AAAAATTATGTTTGAAATGTTATTATCAAAGATA i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012103754v1 904627 55 - 2200435 GCAGTAGCTTCTTACATTTAG-AAAAATTATGTTTGAAATGTTATTATCAAAGATA i manLeu1.NW_012103754v1 C 0 I 1 s otoGar3.GL873658 919128 54 + 5252280 GCAGCAACTTCTTACATTTAT--AAACTTATTTCTGAAATGTCATTATCAAAGAGT i otoGar3.GL873658 C 0 I 4 s mm10.chr12 89984398 47 - 120129022 GTAGTGCCTTCTTAGCTTTAG-AAAACTTACTTTCAAAATGCTGTTAT-------- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1660826 38 + 4416731 GTGGTAA-GTCTCACATT--G------------TTGAAATGTTATTAGAAATT--- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 76991 684 + 287728 I e saiBol1.JH378218 1196361 0 - 7082604 C e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e calJac3.chr14 1346644 0 - 108792865 C e colAng1.NW_012118821v1 1338018 2480 - 13651311 M a score=11877.000000 s hg38.chr2_KI270774v1_alt 83334 2 + 223625 GG s panTro5.chr2A 1360935 2 + 111504155 GG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1321075 2 + 114371477 GG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1345869 2 + 1464242 GA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1068102 2 + 81552678 GG i nomLeu3.chr19 I 1 C 0 s rheMac8.chr13 1401753 2 + 108979918 GG i rheMac8.chr13 I 1 C 0 s macFas5.chr13 1374155 2 - 111193037 GG i macFas5.chr13 I 1 C 0 s macNem1.NW_012011978v1 1402645 2 + 3644372 GG i macNem1.NW_012011978v1 I 1 C 0 s cerAty1.NW_012000820v1 1356226 2 - 10304083 GG i cerAty1.NW_012000820v1 I 1 C 0 s chlSab2.chr14 1429900 2 - 107702431 GG i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012103754v1 904683 2 - 2200435 GG i manLeu1.NW_012103754v1 I 1 C 0 s saiBol1.JH378218 1196361 2 - 7082604 gg i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 919186 2 + 5252280 GG i otoGar3.GL873658 I 4 C 0 s mm10.chr12 89984445 1 - 120129022 G- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1660864 2 + 4416731 GG i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 76991 684 + 287728 I e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e calJac3.chr14 1346644 0 - 108792865 C e colAng1.NW_012118821v1 1338018 2480 - 13651311 M a score=150003.000000 s hg38.chr2_KI270774v1_alt 83336 24 + 223625 -----GGAGAGGCTCCTAGGTTATAAAAA s panTro5.chr2A 1360937 24 + 111504155 -----GGAGAGGCTCCTAGGTTATAAAAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1321077 24 + 114371477 -----GGAGAGGCTCCTAGGTTATAAAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1345871 23 + 1464242 -----GGAGAGGCTCCTAGGTTAT-AAAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1068104 24 + 81552678 -----GGAGAGGCTCCTAGGTTATAAAAA i nomLeu3.chr19 C 0 I 3483 s rheMac8.chr13 1401755 23 + 108979918 -----GGAGAGGCTCCTAGGTTATAAAA- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1374157 23 - 111193037 -----GGAGAGGCTCCTAGGTTATAAAA- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1402647 23 + 3644372 -----GGAGAGGCTCCTAGGTTATAAAA- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1356228 23 - 10304083 -----GGAGAGGCTCCTAGGTTATAAAA- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1429902 23 - 107702431 -----GGAGAGGCTCCTAGGTTATAAAA- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 904685 23 - 2200435 -----GGAGAGGCTCCTAGGTTATAAAA- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1346644 23 - 108792865 -----gGAGAGACGCCAAGGTCATAAAA- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1196363 23 - 7082604 -----ggagagacttCAAGGTTATAAAA- i saiBol1.JH378218 C 0 I 1 s otoGar3.GL873658 919188 23 + 5252280 -----GGTGACACTCCTGAGGTACCATA- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89984446 23 - 120129022 -----GAAGAACTGTCAGAGTTACAGAA- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1660866 28 + 4416731 GGTAGGCAGCCCCTTCTGGGCTATAGAA- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 76991 684 + 287728 I e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e colAng1.NW_012118821v1 1338018 2480 - 13651311 M a score=242171.000000 s hg38.chr2_KI270774v1_alt 83360 26 + 223625 AATACTTGAAGTTGCAACCAGCTATT s panTro5.chr2A 1360961 26 + 111504155 AATACTTGAAGTTGCAACCAGCTATT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1321101 26 + 114371477 AATACTTGAAGTTGCAACCAGCTATT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1345894 26 + 1464242 AATACTTGAAGTTGCAACCAGCTATT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1071611 26 + 81552678 AATACATGAAGTTGCAACCAGCTGTT i nomLeu3.chr19 I 3483 C 0 s rheMac8.chr13 1401778 26 + 108979918 AATACATGAAGCTGCAACCAGCTATT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1374180 26 - 111193037 AATACATGAAGCTGCAACCAGCTATT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1402670 26 + 3644372 AATACATGAAGCTGCAACCAGCTATT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1356251 26 - 10304083 AATACATGAAGTTGCAACCAGCTATT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1429925 26 - 107702431 AATACATGAAGTTGCAACCAGCTATT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 904708 26 - 2200435 AATACATGAAGTTGCAACCAGCTATT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1346667 26 - 108792865 AATACATGACACTGCAACCAGCTATT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1196387 26 - 7082604 AATACATGACATTGCAACCAGCTATT i saiBol1.JH378218 I 1 C 0 s otoGar3.GL873658 919211 26 + 5252280 ACTATGTGAAGTTGCAACCAGCTATT i otoGar3.GL873658 C 0 I 4 s mm10.chr12 89984469 26 - 120129022 AATACAGGAAATTGCAAACAGCCATT i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1660894 26 + 4416731 AACACTTGAAGTTGCAACCGGCTATA i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 76991 684 + 287728 I e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e colAng1.NW_012118821v1 1338018 2480 - 13651311 M a score=10585.000000 s hg38.chr2_KI270774v1_alt 83386 2 + 223625 AA s panTro5.chr2A 1360987 2 + 111504155 AA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1321127 2 + 114371477 AA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1345920 2 + 1464242 AA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1071637 2 + 81552678 AC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1401804 2 + 108979918 AC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1374206 2 - 111193037 AC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1402696 2 + 3644372 AC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1356277 2 - 10304083 AC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1429951 2 - 107702431 AC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 904734 2 - 2200435 AC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1346693 2 - 108792865 AC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1196413 2 - 7082604 AC i saiBol1.JH378218 C 0 C 0 s mm10.chr12 89984495 2 - 120129022 AC i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1660920 2 + 4416731 AC i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 76991 684 + 287728 I e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 919237 4 + 5252280 I e colAng1.NW_012118821v1 1338018 2480 - 13651311 M a score=29593.000000 s hg38.chr2_KI270774v1_alt 83388 4 + 223625 TTGA s panTro5.chr2A 1360989 4 + 111504155 TTGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1321129 4 + 114371477 TTGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1345922 4 + 1464242 TTGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1071639 4 + 81552678 TTGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1401806 4 + 108979918 TTGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1374208 4 - 111193037 TTGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1402698 4 + 3644372 TTGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1356279 4 - 10304083 TTGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1429953 4 - 107702431 TTGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 904736 4 - 2200435 TTGA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1346695 4 - 108792865 TTAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1196415 4 - 7082604 TTAA i saiBol1.JH378218 C 0 C 0 s dasNov3.JH576208 1660922 4 + 4416731 TTAA i dasNov3.JH576208 C 0 I 6 e aotNan1.NW_018513311v1 76991 684 + 287728 I e mm10.chr12 89984497 0 - 120129022 C e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 919237 4 + 5252280 I e colAng1.NW_012118821v1 1338018 2480 - 13651311 M a score=1501004.000000 s hg38.chr2_KI270774v1_alt 83392 278 + 223625 AAACCAAAAATAggccagctgcggtggctcacggctgtaatcccagcactttgggaggccgaagcaggtggatcacttgaggtcaggagtttgagaccagcctggccaacatggcgaaaccctgtctctactaaaaatataaaaattagctgggcgttctggcatgtgcctgtaatcccagctgctcgggaggctgaggcaggagaattgcttgaatttgggaggcaaagattgcagtgagctgagatcacaccattgtacttcagtctgggtaaaga s panTro5.chr2A 1360993 278 + 111504155 AAACCAAAAATAggccagctgcggtggctcatggctgtaatcccagcactttgggaggccgaagcaggtggatcacttgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatataaaaattagctgggcgttctggcatgtgcctgtaatcccagctgctcgggaggctgaggcaggagaattgcttgaatttgggaggcaaagattgcagtgagctgagatcacaccattgtacttcagtctgggtaaaga i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1321133 274 + 114371477 AAACCAAAAATAggccagctgtggtggctcacagctgtaatcccagcactttgggaggccgaagcaggtggatcacttgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatataaaaattagctgggcgttctggcatgtgcctgtaatcccagctgctcgggaggctgaggcaggagaattgcttgaatttgggaggcagagattacagtgagctgagatcacaccattgtacttcagtctgggta---- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1345926 278 + 1464242 AAACCAAAAATAggccagctgtggtggttcacgcctgtaatcccagcactttgggaggccgaagcaggtggatcacttgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaacatacaaaaattagctgggcgttttggcatgtgcctgtaatcccagctgctcaggaggctgaggcaggagaattgcttgaatttgggaggcagagattgcagtgagctgagatcacaccattgtactccagtctgggtaaaga i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1071643 273 + 81552678 AAACCAAAAAGAggccaggtgcagtggctcacgcctgtaatcccagcactttgggaggccaaggcaggagaatcacttgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaatcagctgggctttctggcacgtgcctgtaatcccggctgctcgggaggctgaggcaggagaattgcttaaattt-ggaggcagaggttgcagtcagctgagatcacaccattgcactccagcctgggta---- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1401810 247 + 108979918 AAAACAAAAATAggccgggtgcggtggctcacgcctgtaatcccagaactttgggaggccaaggcagacagatcac--aaggtcaggagttcgagaccagcccggccaacatggtgaaaccccgtctcgactaaaaatacaaaaattagctgggcgtgctggcatgtgcctgtaatcccggctgttcaggaggctgaggcaggagaattacttgaacttgggaggcagaggttgcagtgagctgagatc----------------------------- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1374212 247 - 111193037 AAAACAAAAATAggccgggtgcggtggctcacgcctgtaatcccagaactttgggaggccaaggcagacagatcac--aaggtcaggagttcgagaccagcccggccaacatggtgaaaccccgtctcgactaaaaatacaaaaattagctgggcgtgctggcatgtgcctgtaatcccggctgttcaggaggctgaggcaggagaattacttgagcttgggaggcagaggttgcagtgagctgagatc----------------------------- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1402702 247 + 3644372 AAAACAAAAATAggccgggtgcggtggctcacgcctgtaatcccagaactttgggaggccaaggcagacagatcac--aaggtcaggagttcgagaccagcccggccaacatggtgaaaccccgtctcgactaaaaatacaaaaattagctgggcgtgctggcgtgtgcctgtaatcccggctgttcaggaggctgaggcaggagaattacttgaacttgggaggcagaggttgcagtgagctgagatc----------------------------- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1356283 249 - 10304083 AAAACAAAAATAggccgggtgcggtggctcacgcctgtaatctcagcactttgggaggctgaggcaggtggatcacttgaggtcaggagttcgagaccagcccggccaacacggtgaaaccctgtctctactaaaaatacaaaaattagctgggcgtgctggcatgtgcctgtaatcctagctgttcgggaggccgaggcaggagaattgcttgaacttgggaggcagaggttgcagcgagctgagatt----------------------------- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1429957 278 - 107702431 AAAACAAAAATAggctgggtgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcaggtggatcacttgaggtcaggagttcgagaccagcccggccaacacggcgaaaccctgtctctactaaaaatacaaaaattagctgggcatgctggcatgtgcctgtaatcctggctgttcgggaggccgaggcaggagaatttcttgaacttgggaggcagaggttgcagcgagctgagattgcaccattgcactccagcctgggTAAAGA i chlSab2.chr14 C 0 I 63 s manLeu1.NW_012103754v1 904740 238 - 2200435 AAAACAAAAATAggccgggtgcggtggctcacgcctgtaatcctagcactttgggaggctgaggcaggtggatcacttgaggtcgggagttcaagaccagcccggccaacacggtgaaaccctgtctctactaaaaatacaaaaattagctgggcgtgctggcatgtgcctgtaatcctagctattcgggaggccgaggcaggagaattgcttgaacttgggaggcagaggttgcagc---------------------------------------- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1346699 249 - 108792865 AAAACAGAAGCAggttgagtgcggtggttcacacctgtaatcccggcactttgggaggctgaggcaggtggatcacttgaggtcaggagtttgagaccagcctggccaacatggtgaaacatagtctctactaaaaatacagaaattatctgggtgtgctggcgcatgcctgtaatcccagctacttgggaagctgaggcaggaaagctgtttgaacctgggaggtggaggctgcactgtgctgagatt----------------------------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1196419 249 - 7082604 AAAACAGAAGTAggttgggcgcagtggttcatacctgtaatcccagcattttgggaggccgaggcaggtggatcacttgaggtcaggagtttgagaccagcctggccagcatggtgaaacatagtctctactaaaaatacaaaaatgatctgggtgtgctggcacatgcctgttatcccagctacttgggaagctgaggcaggaaagttgtttgaacctgggaggtggaggttgcactaagctgagatc----------------------------- i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 76991 684 + 287728 I e mm10.chr12 89984497 0 - 120129022 C e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 919237 4 + 5252280 I e dasNov3.JH576208 1660926 6 + 4416731 I e colAng1.NW_012118821v1 1338018 2480 - 13651311 M a score=1510.000000 s hg38.chr2_KI270774v1_alt 83670 37 + 223625 gctgagaTCGCACCATTGCACTCCAGCCTGGGTAAAg s panTro5.chr2A 1361271 36 + 111504155 gctgagaTCGCACCATTGCACTCCAGCCTGGGT-AAg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1321407 3 + 114371477 ----------------------------------aag i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1346204 37 + 1464242 gctgagaTCGCACCATTGCACTCCAGCCTGGGTAAAg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1071916 3 + 81552678 ----------------------------------aag i nomLeu3.chr19 C 0 C 0 s manLeu1.NW_012103754v1 904978 1 - 2200435 ------------------------------------g i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 76991 684 + 287728 I e mm10.chr12 89984497 0 - 120129022 C e saiBol1.JH378218 1196668 0 - 7082604 C e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 919237 4 + 5252280 I e dasNov3.JH576208 1660926 6 + 4416731 I e calJac3.chr14 1346948 0 - 108792865 C e colAng1.NW_012118821v1 1338018 2480 - 13651311 M e chlSab2.chr14 1430235 63 - 107702431 I e cerAty1.NW_012000820v1 1356532 0 - 10304083 C e macNem1.NW_012011978v1 1402949 0 + 3644372 C e macFas5.chr13 1374459 0 - 111193037 C e rheMac8.chr13 1402057 0 + 108979918 C a score=277789.000000 s hg38.chr2_KI270774v1_alt 83707 55 + 223625 agctgagattgcaccactgcactccagcctggataaagaagtgagactctgtctc s panTro5.chr2A 1361307 55 + 111504155 agctgagattgcaccactgcactccagcctggataaagaagtgagactctgtctc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1321410 54 + 114371477 agctgagattgcaccactgcactccagcctggataaagaagtgagactctgtct- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1346241 55 + 1464242 agctgagattgcaccactgcactccagcctgggtaaagaagtgagactctgtctc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1071919 55 + 81552678 agctgagatcacaccattgcactccagcctgggtaaagaagcgagactctgccac i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1402057 45 + 108979918 ----------gtaccattgcactccagcctgggtaaagaagcaagactctgtctc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1374459 45 - 111193037 ----------gtaccattgcactccagcctgggtaaagaagcaagactctgtctc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1402949 45 + 3644372 ----------gtaccattgcactccagcctgggtaaagaagcaagactctgtctc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1356532 45 - 10304083 ----------gcaccattgcactccagcctgggtaaagaagcgagactctgtctc i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 904979 55 - 2200435 agctgagattgcaccattgcactccagcctgggtaaagaagcgagactctgtctc i manLeu1.NW_012103754v1 C 0 I 7 s calJac3.chr14 1346948 45 - 108792865 ----------gtgccattgcacttcagcctgggagaagaagagagactgggtctc i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1196668 45 - 7082604 ----------gtgccattgcactccagcctgggagaagaggagagactctgtctc i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 77675 55 + 287728 agctgagatcgtgccattgcactccagcctgggagaagaagacaggctctgtctc i aotNan1.NW_018513311v1 I 684 C 0 e mm10.chr12 89984497 0 - 120129022 C e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 919237 4 + 5252280 I e dasNov3.JH576208 1660926 6 + 4416731 I e colAng1.NW_012118821v1 1338018 2480 - 13651311 M e chlSab2.chr14 1430235 63 - 107702431 I a score=72356.000000 s hg38.chr2_KI270774v1_alt 83762 13 + 223625 aaaaaaaaaaaaa s panTro5.chr2A 1361362 13 + 111504155 aaaaaaaaaaaaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1321464 12 + 114371477 -acaaaaaaaaaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1346296 13 + 1464242 aaaaaaaaaaaaa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1071974 13 + 81552678 aaaaaaaaaaaaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1402102 13 + 108979918 aaaaaaaaaaaaa i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1374504 13 - 111193037 aaaaaaaaaaaaa i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1402994 10 + 3644372 ---aaaaaaaaaa i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1356577 13 - 10304083 aaaaaaaaaaaaa i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1430298 13 - 107702431 aaaaaaaaaaaaa i chlSab2.chr14 I 63 C 0 s manLeu1.NW_012103754v1 905041 13 - 2200435 aaaaaaaaaaaaa i manLeu1.NW_012103754v1 I 7 C 0 s calJac3.chr14 1346993 13 - 108792865 aagcaaaCTAACA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1196713 13 - 7082604 aagcaaacaaaca i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 77730 13 + 287728 aagcaaacaaaca i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89984497 0 - 120129022 C e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 919237 4 + 5252280 I e dasNov3.JH576208 1660926 6 + 4416731 I e colAng1.NW_012118821v1 1338018 2480 - 13651311 M a score=28617.000000 s hg38.chr2_KI270774v1_alt 83775 7 + 223625 aa---a-------aaaa s panTro5.chr2A 1361375 10 + 111504155 aaaaga-------aaaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1321476 7 + 114371477 aa---g-------agaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1346309 7 + 1464242 aa---a-------aaaa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1071987 7 + 81552678 aa---a-------aaaT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1402115 7 + 108979918 aa---a-------aaaa i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1374517 7 - 111193037 aa---a-------aaaa i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1403004 7 + 3644372 aa---a-------aaaa i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1356590 7 - 10304083 aa---a-------aaaa i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1430311 7 - 107702431 aa---a-------aaaa i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 905054 7 - 2200435 aa---a-------aaaa i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1347006 7 - 108792865 AC---G-------AAAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1196726 10 - 7082604 ac---aac----caaaa i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 77743 14 + 287728 ac---aacaacaaaaaa i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 919241 5 + 5252280 -----A-------AAAA i otoGar3.GL873658 I 4 C 0 s mm10.chr12 89984497 7 - 120129022 AA---A-------AAAA i mm10.chr12 C 0 C 0 e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e dasNov3.JH576208 1660926 6 + 4416731 I e colAng1.NW_012118821v1 1338018 2480 - 13651311 M a score=4353.000000 s hg38.chr2_KI270774v1_alt 83782 4 + 223625 agaa- s panTro5.chr2A 1361385 4 + 111504155 agaa- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1321483 4 + 114371477 aTAA- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1346316 4 + 1464242 aaaa- i gorGor5.CYUI01015607v1 C 0 I 66 s nomLeu3.chr19 1071994 4 + 81552678 CAAA- i nomLeu3.chr19 C 0 I 1 s rheMac8.chr13 1402122 4 + 108979918 tcaa- i rheMac8.chr13 C 0 I 2 s macFas5.chr13 1374524 4 - 111193037 tcaa- i macFas5.chr13 C 0 I 2 s macNem1.NW_012011978v1 1403011 4 + 3644372 tcaa- i macNem1.NW_012011978v1 C 0 I 2 s cerAty1.NW_012000820v1 1356597 4 - 10304083 tcaa- i cerAty1.NW_012000820v1 C 0 I 2 s chlSab2.chr14 1430318 4 - 107702431 CCAA- i chlSab2.chr14 C 0 I 2 s manLeu1.NW_012103754v1 905061 4 - 2200435 TCAA- i manLeu1.NW_012103754v1 C 0 I 2 s otoGar3.GL873658 919246 4 + 5252280 CCAA- i otoGar3.GL873658 C 0 I 2 s mm10.chr12 89984504 4 - 120129022 CAAA- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1660932 4 + 4416731 -AAAC i dasNov3.JH576208 I 6 C 0 e aotNan1.NW_018513311v1 77757 0 + 287728 C e saiBol1.JH378218 1196736 0 - 7082604 C e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e calJac3.chr14 1347013 0 - 108792865 C e colAng1.NW_012118821v1 1338018 2480 - 13651311 M a score=52770.000000 s hg38.chr2_KI270774v1_alt 83786 5 + 223625 aTATT s panTro5.chr2A 1361389 5 + 111504155 aTATT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1321487 5 + 114371477 ATATT i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1071999 5 + 81552678 ATATT i nomLeu3.chr19 I 1 C 0 s rheMac8.chr13 1402128 5 + 108979918 aTATT i rheMac8.chr13 I 2 C 0 s macFas5.chr13 1374530 5 - 111193037 aTATT i macFas5.chr13 I 2 C 0 s macNem1.NW_012011978v1 1403017 5 + 3644372 aTATT i macNem1.NW_012011978v1 I 2 C 0 s cerAty1.NW_012000820v1 1356603 5 - 10304083 aTATT i cerAty1.NW_012000820v1 I 2 C 0 s chlSab2.chr14 1430324 5 - 107702431 ATATT i chlSab2.chr14 I 2 C 0 s manLeu1.NW_012103754v1 905067 5 - 2200435 ATATT i manLeu1.NW_012103754v1 I 2 C 0 s calJac3.chr14 1347013 5 - 108792865 GTATT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1196736 5 - 7082604 aTATT i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 77757 5 + 287728 aTATT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 919252 5 + 5252280 ATATT i otoGar3.GL873658 I 2 C 0 s mm10.chr12 89984508 5 - 120129022 ATATT i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1660936 5 + 4416731 ATATT i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e colAng1.NW_012118821v1 1338018 2480 - 13651311 M e gorGor5.CYUI01015607v1 1346320 66 + 1464242 I a score=896520.000000 s hg38.chr2_KI270774v1_alt 83791 124 + 223625 TGTGACTTTACATTACATGCGTCTC-aaaaa----------aaaa-aaa----------aaacaaaTTTCACTTATGATGTGCAAAATTGCCCAAGCAGCACAAATGAAAACGTAAATTTCCTTCACGTTTCAGTGGAACTGATGC s panTro5.chr2A 1361394 122 + 111504155 TGTGACTTTACATTATATGCGTCTC---AAA----------AAAC-AAA----------AAACAAATTTCACTTATGATGTGCAAAATTGCCCAAGCAGCACAAATGAAAACGTAAATTTCCTTCACGTTTCAGTGGAACTGATGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1321492 120 + 114371477 TGTGACTTTACATTACATGCATCT-----AC----------AAAA-AAA----------AAACAAATTTCACTTATGATGTGCAAAATTGCCCAAGCAGCACAAATGAAAATGTAAATTTCCTTCACCTTTCAGTGGAACTGATGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1346386 125 + 1464242 TGTGACTTTACATTACATGCGTCTCaaaaaa----------aaaa-aaa----------aaacaaaTTTCACTTATGATGTGCGAAATTGCCCAAGCAGCACAAATGAAAACATAAATTTCCTTCACATTTTAGTGGAACTGATGC i gorGor5.CYUI01015607v1 I 66 C 0 s nomLeu3.chr19 1072004 118 + 81552678 TGTGACTTTACATTACATGTGTCTC----AG----------GAAA-AAA----------AAAC---TTTCAATTATGATGTGTGAAATTGCCCAAGCGGTACAAATGAAAACGTAAATTTCCTTCACGTTTCAGTAAAACCGATGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1402133 122 + 108979918 TGTGACTTTACATTACATGTGTCTC----AG----------AAAGAAAA----------AAAAAACTTTCAATTATGATGTGTGAAATTGCCCAAGCAGTACAAATGAAAATGTAAATGTCCTTCACATTTCAGCGAAATTGGTGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1374535 121 - 111193037 TGTGACTTTACATTACATGTGTCTC----AG----------AAAG-AAA----------AAAAAACTTTCAATTATGATGTGTGAAATTGCCCAAGCAGTACAAATGAAAATGTAAATGTCCTTCACATTTCAGCGAAATTGGTGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1403022 121 + 3644372 TGTGACTTTACATTACATGTGTCTC----AG----------AAAG-AAA----------AAAAAACTTTCAATTATGATGTGTGAAATTGCCCAAGCAGTACAAATGAAAATGTAAATGTCCTTCACATTTCAGTGAAATTGGTGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1356608 120 - 10304083 TGTGACTTTACATTACATGTATCTC----AG----------AAAG--GA----------AAAAAACTTTCAATTATGATGTGTGAAATTGCCCAAGCAGTACAAATGAAAATGTAAATGTCCTTCACATTTCAGTGAAACTGGTGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1430329 120 - 107702431 TGTGACTTTACATTACATGTGTCAC----AG----------AAAG--AA----------AAAAAACTTTCAATTATGATGTGTGAAATTGCCCAAGCAGTACAAATGAAAATGTAAATGTCCTTCACATTTCAGTGAAATTGGTGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 905072 120 - 2200435 TGTGACTTTACATTACATGTGTCTC----AG----------AAAG--AA----------AAAAAACTTTCAATTATGATGTGTGAAATTGCCCAAGCAGTACAAATGAAAATGTAAATGTCCTTCACATTTCAGTGAAACTGGTGC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1347018 119 - 108792865 TGTGAC-TTACGTTATATGTGTCTC----AG---------AAAAA-AAC----------ACACAACTTTCCGTTATGGTGTGTGAAATTGCCCAAGCAG-GC-AACGAAAATGTTAATTTCCTTCATGTTTCAGTGAAACGGATGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1196741 130 - 7082604 TGTGACTTTACGTTACATGTGTCTC----AGAAAAAAGAAAAAAA-AAG----------AGAAAACTTTCCATTATGATGTGTGAAATTGCCCAGCAGT-GCAAAAGAAAATGTTTATTTCCTTCATGTTTCAGTGAAACTGATGC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 77762 120 + 287728 TGTGACTTTACATTATATGTGTCTC----AG-----------AAA-AAA----------AAACAACTTTCCATTATGATGTGTGAAATTGCCCAAGAGGTGCAAACGAAAATGTTGATTTCCTTCATGTTTCAGTGAAACTGATGC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 919257 115 + 5252280 -GTGACTTGATGTGACATGTGTCTC----CA---------------GAA----------AAAGACCTCTCCATTATGATGTGTGAAGTCACCCAAGCAGGGGAAGTGGAAATAAAGATTTCCCTCATGACTCGTTGAGG-TGCTGC i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89984513 126 - 120129022 TGTG-CCTGGCCCCACATTTATCCG----GG----------AGTA-AAATCATTGCAATAAAATCCTTGCTGCCATGATGGGTAACACTTCCCAGGCAGGTAAAGTGGGAGTATGAATTTCCT----GTTTTCATGCAAGCAGTGC i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1660941 117 + 4416731 TGTGACTTTATTTTACATGTGTTTT----AG---------------ACA----------AAGAACCTCTCTTTTCTGATGTGTGAAATTTTCTAAGCAGCTTAAGTGAAAATGCAAATTCCCTTCACCTTTGAGGGAAACTGATGC i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e colAng1.NW_012118821v1 1338018 2480 - 13651311 M a score=781714.000000 s hg38.chr2_KI270774v1_alt 83915 78 + 223625 AGGTTTTTATTGTAGCTGTTAGTTTATCCAAGATTTTTATCAGCAAGAATTGAAAATTAACTTCATGTGGAGTC---TTCA--- s panTro5.chr2A 1361516 78 + 111504155 AGGCTTTTATTGTAGCTGTTAGTTTATCCAAGATTTTTATCAGCAAGAATTGAAAATTAACTTCATGTGGAGTC---TTCA--- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1321612 78 + 114371477 AGGCTTTTATTGTAGCTGTTAGTTTATCCAAGATTTTTATCAGCAAGAATTGAAAATTAACTTCATGTGGAGTC---TTCA--- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1346511 78 + 1464242 AGGCTTTTATTGTAGCTGTTAATTTATCCAGGATTTTTATCAGCAAGAATTGAAAATTAACTTCATGTGGAGTC---TTCA--- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1072122 78 + 81552678 AGGCTTTTATTGTAGCTGTTAGTTTATTCAGGATTTTTATCAGCAAGAATCGAAAATTAACTTCACATGGAGTC---TTCA--- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1402255 78 + 108979918 AGGCTTTTATTGTAAGTGTTAGTTTATTCAGGACTTTTATCAGCAAGAATCGAAAATTAACTTCACGTGGAGTC---TTCA--- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1374656 78 - 111193037 AGGCTTTTATTGTAAGTGTTAGTTTATTCAGGACTTTTATCAGCAAGAATCGAAAATTAACTTCACGTGGAGTC---TTCA--- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1403143 78 + 3644372 AGGATTTTATTGTAAGTGTTAGTTTATTCAGGACTTTTATCAGCAAGAATCGAAAATTAACTTCACGTGGCGTC---TTCG--- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1356728 78 - 10304083 AGGCTTTTATTGTAGGTGTTAGTTTATTCAGGACTTTTATCAGCAAGAATCGAAAATTAACTTCATGTGGAGTC---TTCA--- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1430449 78 - 107702431 AGGCTTTTATTATAGGTGTTAGTTTATTCAGGACTTTTATCAGCAAGAATCGAAAATTAACTTCACGTGGAGTC---TTCA--- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 905192 78 - 2200435 AGGCTTTTATTGTAGGTGTTAGTTTATTCAGGACTTTTATCAGCAAGAATCGAAAATTAACTTCACGTGGAGTC---TTCA--- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1340507 78 - 13651311 AGGCTTTTATTGTAGATGTTAGTTTATTCAGGACTTTTATCAGCAAGAATCAAAAATTAACTTCACATGCAGTC---TTCA--- i colAng1.NW_012118821v1 M 2480 C 0 s calJac3.chr14 1347137 77 - 108792865 -AGCTTTTATTCTAGGTGTTAGTTTGTTCAGGATTTTTATCAGCAAGAATTGAAAATTAACTTCATGTGGAGTC---TTCA--- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1196871 77 - 7082604 -AGCTTTTATTGTAGGTGTTAGTTTGTTCAGGATTTTTATCAGAAAGAATTGAAAATTAACTTCATGTGGAGTC---TTCA--- i saiBol1.JH378218 C 0 M 2743 s aotNan1.NW_018513311v1 77882 77 + 287728 -AGCTTTTATTGGAGGTGTTAGTTTGTTCAGGATTTTTATCAGCAAGAATTGAAAATTAACTTCATGTGGAGTC---TTCA--- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 919372 80 + 5252280 ATGCTCTCATCCTAGGGGTCAGATTACACAGGAC-TTCATCAGCAAGCATTGAATACTACCTTCACGTAGAGTTGGGTTCA--- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89984639 58 - 120129022 CTGCCTAGAGTGGAATTG--GGTTGATTGAGGGG----------------AGACCACTGACTTCATTC--ATTC---CCCA--- i mm10.chr12 C 0 I 7 s dasNov3.JH576208 1661058 81 + 4416731 GTGATTTTATTGTAGGTGTGAGTTTATTCAGGATTTTTATCAGCAAGAATTGAATATTAACTTCATGTTGAATC---TTCTTCA i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1288267 580 + 1864846 I a score=1248138.000000 s hg38.chr2_KI270774v1_alt 83993 167 + 223625 TGTCTTGTCAAGTC--------------------------AGACATTAATGGGTAAGCC-AAAGGGGATCTT-TTT----AAAATGCCTTTTTCTTTTTACAAAAATCT-CA---------------------------------------------AAAGCTGGATTCCTTTCTAATCATGTATCCTTG-TGGC---AAAAAATCC--AGCAATACAAGTAAA-AAGGACAT----------------TCCTTTTCCAA-----------G----CCTTCCT- s panTro5.chr2A 1361594 167 + 111504155 TGTCTTGTCGAGTC--------------------------AGACATTAATGGGTAAGCC-AAAGGGGATCTT-TTT----AAAATGCCTTTTTCTTTTTACAGAAATCT-CA---------------------------------------------AAAGCTGGATTCCTTTCTAATCATGTATCCTTG-TGGC---AAAAAATCC--AGCAATACAAGTAAA-AAGGACAT----------------TCCTTTTCCAA-----------G----CCTTCCT- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1321690 167 + 114371477 TGTCTTGTCAAGTC--------------------------AGACATTAATGGGTAAGCC-AAAGGGGATCTT-TTT----AAAATGCCTCTTTCTTTTTACAAAAATCT-CA---------------------------------------------AAAGCTGGATTCCTTTCTAATCATGTATCCTTG-TGGC---AAAAAATCC--AGCAATACAAGTAAA-AAGGACAT----------------TCCTTTTCCAA-----------G----CCTTCCT- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1346589 160 + 1464242 TGTCTTGTCAAGTC--------------------------AGACATTAATGGGTAAGCC-AAAGGGGATC-T-TTT----AAAATGC------CTTTTTACAAAAATCT-CA---------------------------------------------AAAGCTGGATTCCTTTCTAATCATGTATCCTTG-TGGC---AAAAAAACC--AGCAATACAAGTGAA-AAGGACAT----------------TCCTTTTCCAA-----------G----CCTTCCT- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1072200 166 + 81552678 TGTCTTGCCAAGTC--------------------------AGATATTAATGGGTAAGCC-AAAGGAGATC-T-TTT----TAAATGCCTTTTTCTTTTTACAAAAATCT-CA---------------------------------------------AGAGATGGATTCCTTTCTAATCACGTATCCTTG-TGGCAAAAAAAAATCC--AGCAATACAAGTAAA----GACAT----------------TCCTTTTCCAA-----------G----CCTTCCT- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1402333 168 + 108979918 TGTCTTGGCAAGTC--------------------------AGACATTAATGGGTAAGCC-AAAGGGGATCTT-TTT----AAAATGCCTTTTTCCTTTTTCAAAAATCT-CA---------------------------------------------AGAGATGGATTCCTTTCTAACCATGTATCCTTG-TGGC---AAAACGTCC-AAGCAATATAAGTAAA-AAGGACAT----------------TCCTTTTCTAA-----------G----CCTCCCT- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1374734 168 - 111193037 TGTCTTGGCAAGTC--------------------------AGACATTAATGGGTAAGCC-AAAGGGGATCTT-TTT----AAAATGCCTTTTTCCTTTTTCAAAAATCT-CA---------------------------------------------AGAGATGGATTCCTTTCTAACCATGTATCCTTG-TGGC---AAAACGTCC-AAGCAATATAAGTAAA-AAGGACAT----------------TCCTTTTCTAA-----------G----CCTCCCT- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1403221 168 + 3644372 TGTCTTGGCAAGTC--------------------------AGACATTAATGGGTAAGCC-AAAGGGGATCTT-TTT----AAAATGCCTTTTTCCTTTTTCAAAAATCT-CA---------------------------------------------AGAGATGGATTCCTTTCTAACCATGTATCCTTG-TGGC---AAAACGTCC-AAGCAATATAAGTAAA-AAGGACAT----------------TCCTTTTCTAA-----------G----CCTCCCT- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1356806 161 - 10304083 TGTCTTGGCAAGTC--------------------------AGACATGAATGGGTAAGCC-AAAGGGGATCTT-TTT----AAAATG-------CCTTTTTCAAAAATCT-CA---------------------------------------------AGAGATGGATTCCGTTCTGATCATGTATCCTTG-TGGC---AAAACGTCC-AAGCAATATAAGTAAA-AAGGACAT----------------TCCTTTTCCAA-----------G----CCTCCCT- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1430527 161 - 107702431 TGTCTTGGCAAGTC--------------------------AGACATTAATGGGTGAGCC-AAAGGGGATCTT-TTT----AAAATG-------CCTTTTTCAAAAATCT-CA---------------------------------------------AGAGATGGATTCCGTTCTAATCATGTATCCTTG-TGGC---AAAATGTCC-AAGCAATGTAAGTAAA-AAGGATGT----------------TCCTTTTCCAA-----------G----CCTCCCT- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 905270 161 - 2200435 TGTCTTGGCAAGTC--------------------------AGACATTAATGGGTAAGCC-AAAGGGGATCTT-TTT----AAAATG-------CCTTTTTCAAAAATCT-CA---------------------------------------------AGAGATAGATTCCGTTCTGATCATGTATCCTTG-TGGC---AAAACGTCC-AAGCAATATAAGTAAA-AAGGACAT----------------TCCTTTTCCAA-----------G----CCTCCCT- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1340585 168 - 13651311 TGTCTTGGCAAGTC--------------------------AGACATTAATGGGTAAGCC-AAAGGGGATCTT-GTT----AAAATGCCTTTTTCCTTTTCCAAAAATCT-CA---------------------------------------------AGAGATGGATTCCTTTCTAACCATGTATCCTTG-TGGC---AAAACGTCC-AAGCAATGTAAGTAAA-AAGGACAT----------------TCCTTTTCTAA-----------G----CCTCCCT- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1347214 177 - 108792865 CGTGTTGGTGAGTC--------------------------AGACATCAATGGGTAAGCC-CAAGGGAGAGCT-TTT----AAAAA------TGCCTTTTACAAAAATCTAAA---------------------------------------------AAAGATGGATTCCTTTCTAATCATGTACCCTTG-TGGC---AAACAATCC-AAACAATATAAGTAAA-AAGGCAATTCCTTTGAAA--GCCGTCCTTTTCCAA-----------G----GCTTCCT- i calJac3.chr14 C 0 C 0 s aotNan1.NW_018513311v1 77959 183 + 287728 TGTGCTGGCCAGTC--------------------------AGACGTTAATGGGTAAGCC-CAAGGGAGAGCT-TTT----AAAACGCCTTTTACCTTTTACGAAAATCTAAA---------------------------------------------AAAGATGGATTCCTTTCTAATCATGTGTCCTTG-CGGC---AAAGAATCC-AAGCCATGTAAGTAAA-AAGGAAATTCCTTCAAAA--GCCATCCTTTTCCAA-----------G----GCTTCCT- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 919452 181 + 5252280 TGTCTCTGCAAGTC--------------------------AGGCTCTAATGAATAAGCCTAAAGGAGATGTT-TTT----AAAATGCCTTTTATCTTTTAC-AAAATGT-AA---------------------------------------------AGAGATAGATTGCTTTCTAATAATGTTTCCTTA-TGAC---CAAATATTTCAAGCACTATAAGTAAAGAAGGAGGC----------------CCCCTTTTAAAAGCCTCCTCCCA----CCCCCCT- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89984704 244 - 120129022 TGTCCTGGCAAGTCTATAGAAGCCCTGTCTCCAAaaacaaacaaacaaacaaaaaaaca-GAAGAGAGTCTTCTTT----AAAATTCCTTTcatcctttatagaaacag-aaagagcgaagaaagagagagagagagagagagagagagagagagagagagagaaaTTGCTTTCTAATCATGTGTCCTTGATGTC---AAAAAGTCA--AGCAATCTAAATAAA-AAGAAAAT----------------CCTTTCTAAAA-----------GGTCATCTTCCT- i mm10.chr12 I 7 I 562 s dasNov3.JH576208 1661139 186 + 4416731 TGTCTTGACTAGTC--------------------------A-ATATTAATGACTATGCT-GAAAGGCAGTCT-TTTAGAAAAAATCCTTATGATCTTTCACAGAAATGT-AC---------------------------------------------ATAGATT--TTTTTTTTCTGTAATATATCCTTG-TGGT---AAAATTTTC-AAACAGTCTCAGTAAA-AAGAAAACCTCTTTTAAAATGCCCTCCTTTTCCTA-----------G----CCTCTCCT i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1196948 2743 - 7082604 M e cebCap1.NW_016107827v1 1288267 580 + 1864846 I a score=752234.000000 s hg38.chr2_KI270774v1_alt 84160 97 + 223625 CGTGGCCTGAAGTAACTGTGGTGCGTCATAGTCT-CCTGTGCTGACTTTCCAACCT--------------GATGTCTGTCCTTGTAGGTCTG----GATACTCCTCACCTTGCTGT-- s panTro5.chr2A 1361761 97 + 111504155 CGTGGCCTGAAGTAACTGTGCTGCGTCGTAGTCT-CCTGTGCTGACTTTCCAACCT--------------GATGTCTGTCCTTGTAGGTCTG----GATACTCCTCACCTTGCTGT-- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1321857 97 + 114371477 CGTGGCCTGAAGTAACTGTGGTGCGTCGTAGTCT-CCTGTGCTGACTTTCCAACCT--------------GATGTCTGTCCTTGTAGGTCTG----GATACTCCTCACCTTGCTGT-- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1346749 97 + 1464242 CGCGACCTGAGGTAACTGTGGTGCGTCGTAGTCT-CCTGTGCTGACTTTCCAACCT--------------GATGTCTGTCCTTGTAGGTCTG----GATGCTCCTCACCTTGCTGT-- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1072366 97 + 81552678 CGTGGCCTGAAGTAACTGTGGTGCATCGTAGTCT-CCTGTGCTGACTTTCCAACCT--------------GACGTCTGTCCTGGTAGGTCTG----GATATTCCTCACCTTGCTGT-- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1402501 97 + 108979918 CATGGCCTGAAGCAACTGTGGGGCATCGTAGTCT-CTTGTGCTGACTTTCCAACCT--------------GACATCTGTCCTTGTAGGTCTG----GGTATTCCTCACCTTGCCGT-- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1374902 97 - 111193037 CATGGCCTGAAGCAACTGTGGGGCATTGTAGTCT-CTTGTGCTGACTTTCCAACCT--------------GACATCTGTCCTTGTAGGTCTG----GGTATTCCTCACCTTGCCGT-- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1403389 97 + 3644372 CATGGCCTGAAGCAACTGTGGGGCATCGTAGTCT-CTTGTGCTGACTTTCCAACCT--------------GACATCTGTCCTTGTAGGTCTG----GGTATTCCTCACCTTGCCGT-- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1356967 97 - 10304083 CATGGCCTGAAGCAACTGTGGGGCATCGTAGTCT-CTTGTGCTGACTTTCCAACCT--------------GACATCTGTCCTTGTAGGTCTG----GGTATTCCTCACCTTGCCGT-- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1430688 97 - 107702431 CATGGCCTGAATCAACTGTGGGGCATCGTAGTCT-CTTGTGCTGACTTTCCAACCT--------------GACATCTGTCCTTGTAGGTCTG----GGTATTGCTCACCTTGCTGT-- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 905431 97 - 2200435 CATGGCCTGAAGCAACTGTGGGGCATCGTAGTCT-CTTGTGCTGACTTTCCAACCT--------------GACATCTGTCCTTGTAGGTCTG----GGTATTCCTCACCTTGCCGT-- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1340753 97 - 13651311 CATGGCCTGAAGTAACTGTGGGGCATCGTAGTCT-CTTGTGCTGACTTTCCAACCT--------------GACATCTGTCCTTGTAGGTCTG----GGTATTCCTCACCTTGCTGT-- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1347391 97 - 108792865 CGTGCCCTGAAATAACTGTGGTGCATC-TAGTCTCCCTGTGCTGACTTTCCAACCT--------------GATATCTGCCCTTGTAGGTCTG----GGTGATGCTCACCTTGCTGT-- i calJac3.chr14 C 0 I 137 s aotNan1.NW_018513311v1 78142 96 + 287728 CGTGCCCTGAAATAACTGTGGTGCATCGTAGTCT-CCTGTGCCGACTCTCCAACCT--------------GATATCTGCCC-TGTAGGTCTG----GGTGGTCCTCACCGTGCTGT-- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 919633 90 + 5252280 CATACCCTGAAGTAAC--TGGCACGTGGCAGTCT--TCATGCC-ACTCTCCAACCT--------------GATACCCACCCC--CAGGCTGG----GAGACTCCT-GCCTGGCTGG-- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1661325 114 + 4416731 CACTCCTCAGAATAACTGTGGCATGTATTTGTCT----GTACCAGCTTTATAACCTAACAGTGTTTTGTGGACATCTTTCCTTGCCCATCTGAATAGATGGTTTTCATTCTTGTCTGA i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89984948 562 - 120129022 I e saiBol1.JH378218 1196948 2743 - 7082604 M e cebCap1.NW_016107827v1 1288267 580 + 1864846 I a score=9555.000000 s hg38.chr2_KI270774v1_alt 84257 1 + 223625 A s panTro5.chr2A 1361858 1 + 111504155 A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1321954 1 + 114371477 A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1346846 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1072463 1 + 81552678 A i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1402598 1 + 108979918 A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1374999 1 - 111193037 A i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1403486 1 + 3644372 A i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1357064 1 - 10304083 A i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1430785 1 - 107702431 A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 905528 1 - 2200435 A i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1340850 1 - 13651311 A i colAng1.NW_012118821v1 C 0 C 0 s aotNan1.NW_018513311v1 78238 1 + 287728 A i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 919723 1 + 5252280 A i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1661439 1 + 4416731 A i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89984948 562 - 120129022 I e saiBol1.JH378218 1196948 2743 - 7082604 M e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e calJac3.chr14 1347488 137 - 108792865 I a score=799994.000000 s hg38.chr2_KI270774v1_alt 84258 102 + 223625 AGCTCAGAGAGCTTCGCCTCC--AGTCCCCTCC-AGGAGACTGAG--GCTCCCATCAGCAGA--GCCTCCCA-TATCTGTGCCTGCAGGTTGGCCTGAGCTGTAGGCAGC s panTro5.chr2A 1361859 102 + 111504155 AGCTCAGAGAGCTTCGCCTCC--AGTCCCCTTC-AGGAGGCTGAG--GCTCTCATCAGCAGA--GCCTCCCA-TATCTGTGCCTGCAGGTTGGCCTGAGCTGTAGGCAGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1321955 102 + 114371477 AGCTCAGAGAGCTTCGCCTCC--AGTCCCCTCC-AGGAGGCTGAG--GCTCCCATCAGCAGA--GCCTCCTA-TATCTGTGCCTGCAGGTTGGCCTGAGCTGTAGGCAGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1346847 102 + 1464242 AGCTCAGAGAGCTTCGCCTCC--AGTCCCCTCC-AGGAGGCTGAG--GCTCCCATCAGCAGA--GCCTCCCA-TATCTGTGCCTGCAGGTTGGCCTGAGCCGCAGGCAGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1072464 102 + 81552678 AACTCAGAGAGCTTTGCCTCC--AGTCTCCTCC-AGGAGGCTGAG--GCTCCCATCAGCAGA--GCCTCCCA-TATCTGTGCCTGCAGGTTGGCCTGAGCTGCAGGCAGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1402599 102 + 108979918 AGCTCAGAGAGCTTCGCCTCC--CGTCCCCTCC-AGGAGGCTGAG--GCTCCCATCAGCAGA--GCCTCCCA-TGTCTGTGCCTCCAGGTTGGCCGGAGCTGCAGGCAGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1375000 102 - 111193037 AGCTCAGAGAGCTTCGCCTCC--CGTCCCCTCC-AGGAGGCTGAG--GCTCCCATCAGCAGA--GCCTCCCA-TGTCTGTGCCTCCAGGTTGGCCGGAGCTGCAGGCAGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1403487 102 + 3644372 AGCTCAGAGAGCTTCGCCTCC--CGTCCCCTCC-AGGAGGCTGAG--GCTTCCATCAGCAGA--GCGTCCCG-TGTCTGTGCCTCCAGGTTGGCCGGAGCTGCAGGCAGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1357065 102 - 10304083 AGCTCAGAGAGCTTCGCCTCC--CGTCCCCTCC-AGGAGGCTGAG--GCTCCCATCAGCAGA--GCCTCCCA-TGTCTGTGCCTCCAGGTTGGCCGGAGCTGCAGGCAGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1430786 102 - 107702431 AACTCAGAGAGCTTCGCCTCC--CGTCCCCTCC-AGGAGGCTGAG--GCTCCCATCAGCAGA--GCCTCCCA-TGTCTGTGCCTCCAGGTTGGCCAGAGCTGCAGGCAGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 905529 102 - 2200435 AGCTCAGAGAGCTTCGCCTCC--CGTCCCCTCC-AGGAGGCTGAG--GCTCCCATCAGCAGA--GCCTCCCA-TGTCTGTGCCTCCAGGTTGGCCGGAGCTGCAGGCAGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1340851 102 - 13651311 AGCTCAGAGAGCTTCACCTTC--CATCCCCTCC-AGGAGGCTGAG--GCTCCCATCAGCAGA--GCCTCCCA-TATCTGTGCCTCCAGGTTGGCTGGAGCTGCAGGCAAC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1347625 102 - 108792865 AACGCAGAGAGCTTCACCTGC--AGTCCCCTGC-AGGAGGCCCAG--GCACCCATCAGCAGA--GCCACCCG-TGTCTGTGCCTCCAGGCTGGCTTCAGCTGCAGGCAAC i calJac3.chr14 I 137 C 0 s aotNan1.NW_018513311v1 78239 102 + 287728 AACTCAGAGAGCTTCACCTCC--AGTCCCCTGC-AGGAGGCTGAG--GCTCCCATCGGCAGA--GCCACCCG-TGTCTGTGCCTCCAGGTTGGCCTCAGCTGCAGGCAGC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 919724 66 + 5252280 GATGCCAAGAGCCTTG----------------C-AGGGGTCTCAG--------------------------A-TGTCTGTGCCTCTGAGTCAGCCTGGActgtgagctat i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1661440 110 + 4416731 AGATGTAAGAGCATCCCATCCAGAGTCCTCTCCAAGGGAgctgagagagtccaggctgcagacggccttcagctctctgtttcctcaggttctgcttggctgtggagagc i dasNov3.JH576208 C 0 I 270 e mm10.chr12 89984948 562 - 120129022 I e saiBol1.JH378218 1196948 2743 - 7082604 M e cebCap1.NW_016107827v1 1288267 580 + 1864846 I a score=839363.000000 s hg38.chr2_KI270774v1_alt 84360 142 + 223625 GTGCACATCACAATCACCCTGCT------GAAAGAAAGTCACCCtgat------aaaagtaaaactttaggcaaaacacattgaagtgagtttacttgaccattagaagactc-gtgaattgggcagcactcggaaacagaggaggttc--------------------------------------------------------agagaa s panTro5.chr2A 1361961 142 + 111504155 GTGCACATCACAATCACCCTGCT------GAAAGAAAGTCACCCtgat------aaaagtaaaactttaggcaaaacacattgaagtgagtttacttgaccattagaagactc-gtgaattgggcagcactcggaaacagaggaggttc--------------------------------------------------------agagaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1322057 143 + 114371477 GTGCACATCACAATCACCCTGCT------GAAAGAAAGTCACCCTGAT-----Aaaaagtaaaactttaggtaaaacacattgaagtgagtttacttgaccattagaggactc-gtgaattgggcagcactcggaaacagaggaggttc--------------------------------------------------------agagaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1346949 142 + 1464242 GTGCACATCACAGTCACCCTGCT------GAAAGAAAGTCACCCtgat------aaaagtaaaactttaggcaaaacacattgaagtgagtttacttgaccattagaggactc-gtgaattgggcagcactcggaaacagaggaggttc--------------------------------------------------------agagaa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1072566 142 + 81552678 ATGCACATCACAGTCACCCTGCT------GAAAGAAAGTCACCCtgct------aaaagtaagactttaggcaaaacacattgaagtgagtttacttgaccattagaggactc-acgaattgggcagcactcagaaacagaggaggttc--------------------------------------------------------agggaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1402701 123 + 108979918 GCACACATCACAGTCACCCGGCC-------------------------------Gaaagtgaaactttaggcaaaacacattgaagtgactttacttgaccatccgaggactc-gtgaattaggcagcacttggaaacagaggaggttc--------------------------------------------------------agggaa i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1375102 123 - 111193037 GCACACATCACAGTCACCCGGCC-------------------------------Gaaagtgaaactttaggcaaaacacattgaagtgactttacttgaccatccgaggactc-gtgaattaggcagcacttggaaacagaggaggttc--------------------------------------------------------agggaa i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1403589 123 + 3644372 GCACACATCACAGTCACCCGGCC-------------------------------Gaaagtgaaactttaggcaaaacacattgaagtgactttacttgaccatccgcggactc-gtgaattaggcagcatttggaaacagaggaggttc--------------------------------------------------------agggaa i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1357167 123 - 10304083 GCACACATCACAGTCACCCGGCC-------------------------------Gaaagtgaaactttaggcaaaacacatcgaagtgagttaacttgaccatcagaggactc-gtgaattaggcagcacttggaaacagaggaggttc--------------------------------------------------------agggaa i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1430888 123 - 107702431 GCGCACATCACAGTCACCCtgcc-------------------------------aaaagtaaaactttaggcaaaacacaatgaagtgagttaacttgaccatcagaggactc-gtgaattaggcagcactcggaaacagaggaggttc--------------------------------------------------------agggaa i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 905631 177 - 2200435 GCACACAT--CAGTCACCCGGCC-------------------------------Gaaagtgaaactttaggcaaaacacatcgaagtgagttaacttgaccatcagaggactc-gtgaattaggcagcacttggaaacagaggaggttcagggaacCGTGAAGGCAGTGGCCTCTCAGACGGATGGGGAAGGAAGACAGGCACAGAGGGAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1340953 124 - 13651311 GTGCACATCACAGTCACCCTGCC-------------------------------Gaaagtaaaactttaggcaaaacgcattgaagtgagtttacttgaccatcagaggactcaatgaattaggcagcacttggaaacagaggaggttc--------------------------------------------------------agggaa i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1347727 115 - 108792865 ATG-----TACGGTCACCCtgct-------------------------------aagagaaaagctttaggcaaaacccattgaagtgagtttacttgaccattagatgactc-atgaattgggcagcactgagaaaca---gaggttc--------------------------------------------------------agagag i calJac3.chr14 C 0 C 0 s aotNan1.NW_018513311v1 78341 120 + 287728 GTGCACACCACGGTCACCCTCCt-------------------------------aagagaaaaactttaggcaaaacacattgaagtgagtttccttgaccactggaggaatc-atgaattgggcagcactcagaaaca---gaggttc--------------------------------------------------------agagag i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 919790 150 + 5252280 a---acaccacggt-actctactcaaggtgacagaatgagactctatctcaaaaaaaaaaaaaaaaaCagacaaaattaatttacctgagcttacttgagcactagaggattc-atgaatcaggcgacactcagaaacgagagaggtac--------------------------------------------------------taagaa i otoGar3.GL873658 C 0 I 8 e mm10.chr12 89984948 562 - 120129022 I e saiBol1.JH378218 1196948 2743 - 7082604 M e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e dasNov3.JH576208 1661550 270 + 4416731 I a score=1111340.000000 s hg38.chr2_KI270774v1_alt 84502 172 + 223625 gagc--------------------------------------------------------gagggcagtgacctctcagat----------------------------------------------------ggatggggaaggaagacagagacaatgcacccaatcagttagagcaggagccccagccacaggggagttggtggtttctgattagtaaagtcgctagttctctttttctgtttacaatgggctttggtttgctcactcaagaacccc s panTro5.chr2A 1362103 170 + 111504155 cagc--------------------------------------------------------gagggcagtgacctctcagat----------------------------------------------------ggatggggaaggaagacagagacaatgcacccaatcagttagagcaggagccccagccacaggggagttggtggtttctgattagtaaagtcgctagt--tctttttctgtttacaatgggctttggtttgctcactcaagaacccc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1322200 172 + 114371477 cagc--------------------------------------------------------gagggcagtgacctctcagat----------------------------------------------------ggatggggaaggaagacagagacaatgcacccaatcagttagagcaggagccccagccacaggggagttggtggtttctgattagtgaagtcgctagttctctttttctgtttacaatgggctttggtttgctcactcaagaacccc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1347091 170 + 1464242 cagc--------------------------------------------------------gagggcggtgacctctcagac----------------------------------------------------ggatggggaaggaagacagagacaatgcacccaatcagttagagcaggagccccagccacaggggagttggtggtttctgattagtaaagtcgctagt--tctttttctgtttacagtgggctttggtttgctcactcaagaacccc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1072708 169 + 81552678 cagt--------------------------------------------------------gagggcagtggcctctcagat----------------------------------------------------ggatggggaaggaagac--agacaaggcacccaatcagttagggcaggagcccc-gtcacaggggagttggtggtttctgattagtaaagtctctagttctgtttttctgtttacactgggctttggtttgctcactcaagaacccc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1402824 166 + 108979918 ctGT--------------------------------------------------------GAAGGCAGTGGCCTCTCAGAC----------------------------------------------------GGATGGGAAAGGAAGACAGACACAATGTACCCAATCAGTTa------gagcccctgccacaggggagttgctggtttctgattactaaagtcgctagttctgtttttctgtttacactgggctttggtttgctcactcaagaaccca i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1375225 166 - 111193037 ctGT--------------------------------------------------------GAAGGCAGTGGCCTCTCAGAC----------------------------------------------------GGATGGGAAAGGAAGACAGACACAATGTACCCAATCAGTTA------GAGCCCCCGCCACAGGGGagttgctggtttctgattactaaagtcgctagttctgtttttctgtttacactgggctttggtttgctcactcaagaaccca i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1403712 166 + 3644372 ctGT--------------------------------------------------------GAAGGCAGTGGCCTCTCAGAC----------------------------------------------------GGATGGGAAAGGAAGACAGACACAATGTACCCAATCAGTTA------GAGCCCCCGCCACAGGGGagttgctggtttctgattactaaagtcgctagttctgtttttctgtttacactgggctttggtttgctcactcaagaaccca i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1357290 222 - 10304083 cCGTGAAGGCAGTGGCCTCTCAGACGGATGGGAAAGGAAGACAGACACAGAGGGAACCGGGAAGGCAGTGGCCTCTCAGAC----------------------------------------------------GGATGGGAAAGGAAGACAGACACAATGTACCCAATCAGTTA------GAGCCCCCGCCACaggggagttgctggtttctgattactaaagtcgctagttctgtttttctgtttacactgggctttggtttgctcactcaagaaccca i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1431011 166 - 107702431 cCGT--------------------------------------------------------GAAGGCAGTGGCCTCTCAGAT----------------------------------------------------GGATGGGAAAGGAAGACAGACACAATGTACCCGATCAGTTA------GAGCCCCCGCCACAGGGGagttgctggtttctgattactaaagtcgctagttctgtttttctgtttacactgggctttggtttgctcactcaagaaccca i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 905808 166 - 2200435 CCGT--------------------------------------------------------GAAGGCAGTGGCCTCTCAGAC----------------------------------------------------GGATGGGGAAGGAAGACAGACACAATGTACCCAATCAGTTA------GAGCCCCCGCCACAGGGGagttgctggtttctgattgctaaagtcgctagttctgtttttctgtttacactgggctttggtttgctcacacaagaaccca i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1341077 218 - 13651311 cCGT--------------------------------------------------------GAAGGCAGTGGCCTCTTAGACGGATGGGGAAGGAAGACAGACAGAGAGGGAACCGCGAAGGCAGTGGCCTCTTGGATGGGGAAGGAAGACAGACACAATGTACCCAATCAGTTG------GAGccccaaccacaggggagttgctggtttctgattactaaagtcgctagttctgtttttctgtttacattgggctttggtttgctcacacaagaaccca i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1347842 172 - 108792865 cAGC--------------------------------------------------------AAGGGCAGCGGCCTCTCAGGC----------------------------------------------------GGATGAGGAAGGAAGACAGAGACAGAGGATCCCATCAGTTACAGCAGGAGACCCAGCCACagaggagttggcggcttccgatgaggagagtcgctagttctgtttttctgcttacactgggctttggtttgctcactcaagaactcT i calJac3.chr14 C 0 C 0 s aotNan1.NW_018513311v1 78461 169 + 287728 cagc--------------------------------------------------------aggggcagtggcctctcagag----------------------------------------------------ggatggggaaggaagac--ggacagtggatccgatcagttacagcAGGAGACCCAGCCACAGAGGAGTTGGTGGCTTCTGACGACGAGAGTCGCTCGTTCTG-TTTTCTGTTTACACTGGGCTTTGCTTTGCTCACTCAAGAACTCT i aotNan1.NW_018513311v1 C 0 I 27 e mm10.chr12 89984948 562 - 120129022 I e saiBol1.JH378218 1196948 2743 - 7082604 M e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 919940 8 + 5252280 I e dasNov3.JH576208 1661550 270 + 4416731 I a score=212125.000000 s hg38.chr2_KI270774v1_alt 84674 42 + 223625 agccctggagccttcccagcctagtgtcctcccaGCGAGAAT s panTro5.chr2A 1362273 42 + 111504155 agccctggagccttcccagcctagtgtcctcccaGCGAGAAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1322372 42 + 114371477 agccctggagccttcccagcctagtgtcctcccaGCGAGAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1347261 42 + 1464242 agccctggagccttcccagcctagtgtcctcccaGCGAGAAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1072877 42 + 81552678 agccctggagccgtcccagcctaatgtcctcccagtGAGAAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1402990 42 + 108979918 agccgtggagccgtcccagcctagtggcctcccagtGCAAAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1375391 42 - 111193037 agccgtggagccgtcccagcctagtggcctcccagtGCAAAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1403878 42 + 3644372 agccgtggagccgtcccagcctagtggcctcccagtGCAAAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1357512 42 - 10304083 agccgtggagccgtcccagtctagtgtcctcccagtGCAAAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1431177 42 - 107702431 agccgtggagccatcccggcttagtgtcctcccagtGCAAAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 905974 42 - 2200435 agccgtggagtcgtcccagcctagtgtcctcccagtGCAAAT i manLeu1.NW_012103754v1 C 0 I 129 s colAng1.NW_012118821v1 1341295 42 - 13651311 agccctggagccgtcccagcccagtgtcctcccagtGCGAAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1348014 22 - 108792865 --CGCTGGGAGGGCACTAGGCTGG------------------ i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 78630 27 + 287728 I e mm10.chr12 89984948 562 - 120129022 I e saiBol1.JH378218 1196948 2743 - 7082604 M e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 919940 8 + 5252280 I e dasNov3.JH576208 1661550 270 + 4416731 I a score=20130.000000 s hg38.chr2_KI270774v1_alt 84716 3 + 223625 GCT s panTro5.chr2A 1362315 3 + 111504155 GCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1322414 3 + 114371477 GCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1347303 3 + 1464242 GCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1072919 3 + 81552678 GCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1403032 3 + 108979918 GCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1375433 3 - 111193037 GCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1403920 3 + 3644372 GCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1357554 3 - 10304083 GCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1431219 3 - 107702431 GCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 906145 3 - 2200435 GCT i manLeu1.NW_012103754v1 I 129 C 0 s colAng1.NW_012118821v1 1341337 3 - 13651311 GCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1348036 3 - 108792865 GAT i calJac3.chr14 C 0 I 1 e aotNan1.NW_018513311v1 78630 27 + 287728 I e mm10.chr12 89984948 562 - 120129022 I e saiBol1.JH378218 1196948 2743 - 7082604 M e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 919940 8 + 5252280 I e dasNov3.JH576208 1661550 270 + 4416731 I a score=193965.000000 s hg38.chr2_KI270774v1_alt 84719 31 + 223625 GACACTACCCAC-------------------------------------------CAGGCAGCTACACCCATGA s panTro5.chr2A 1362318 31 + 111504155 GACACTACCCGC-------------------------------------------CAGGCAGCTATACCCATGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1322417 31 + 114371477 GACACTACCCAC-------------------------------------------CAGGCAGCTATACCCATGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1347306 31 + 1464242 GACACCACCTGC-------------------------------------------CAGGCAGCTACACCCATGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1072922 31 + 81552678 GACACCACCTGC-------------------------------------------CAGGCAGCTACACCCATGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1403035 31 + 108979918 GACACCACCTGC-------------------------------------------CAGGTGGCTACACCCATGA i rheMac8.chr13 C 0 I 86 s macFas5.chr13 1375436 74 - 111193037 GACACCACCTGCCAGGTGGCTACACCCATGACCCAGCCAGGCTGACACCACCTGCCAGGTGGCTACACCCATGA i macFas5.chr13 C 0 I 43 s macNem1.NW_012011978v1 1403923 31 + 3644372 GACACCACCTGC-------------------------------------------CAGGTGGCTACACCCATGA i macNem1.NW_012011978v1 C 0 I 43 s cerAty1.NW_012000820v1 1357557 31 - 10304083 GACACCACCTGC-------------------------------------------CAGGTGGCTACACCCATGA i cerAty1.NW_012000820v1 C 0 I 131 s chlSab2.chr14 1431222 31 - 107702431 GACACCACCTGC-------------------------------------------CAGGTGGCTACACCCATGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 906148 31 - 2200435 GACACCACCTGC-------------------------------------------CAGGTAGCTACACCCATGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1341340 31 - 13651311 GACACCACCTGC-------------------------------------------CAGGTAGCTACACCCATGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1348040 31 - 108792865 GCTCGTGCCTGC-------------------------------------------CAGGCAGCCACACCTGTGA i calJac3.chr14 I 1 C 0 s aotNan1.NW_018513311v1 78657 31 + 287728 GCTAGTGCCTGC-------------------------------------------CAGGCAGCCACACCTGTGA i aotNan1.NW_018513311v1 I 27 C 0 e mm10.chr12 89984948 562 - 120129022 I e saiBol1.JH378218 1196948 2743 - 7082604 M e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 919940 8 + 5252280 I e dasNov3.JH576208 1661550 270 + 4416731 I a score=901782.000000 s hg38.chr2_KI270774v1_alt 84750 127 + 223625 C--------------------------------------------CCAGCCAggccagctacagccccatagctcccctcaggaccagacaagcagagcctgcacagccctgagcttctccctctgcccatcctgctacctcctcctcctggcatgggtttgatccctaat s panTro5.chr2A 1362349 127 + 111504155 C--------------------------------------------CCAGCCAggccagctacagccccacagctcccctcaggaccagacaagcagaacctgcacagccctgagcttctccctctgcccatcctgctacctcctcctcctggcatgggtttgatccctaat i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1322448 127 + 114371477 C--------------------------------------------CCAGCCAggccagctacagccccacagctcccctcaggaccagacaagcagagcctgcacagccctgagcttctccctctgcccatcctgctacctcctcctcctggcatgggtttgatccctaat i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1347337 127 + 1464242 C--------------------------------------------CCAGCCAggccagctacagccccacagctcccctcaggaccagacaagcaaagcctgcacagccctgagcttctccctctgcccatcctgctacctcctcctcctggcatgggtttgatccctaat i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1072953 127 + 81552678 C--------------------------------------------CCAGCCAggccagctacagccccacagctcccctcaggaccagacgagcagagcctgcacagccctgaacttctccctctgcccatcctgcttcctcctcatcctggcatggatttgatccctaat i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1403152 126 + 108979918 T--------------------------------------------CCAGCCAggccagctatagccccacagctcccctcaggaccagatgagcagagcctgcacagccctgagcttctgcctctg-ccatcctgcttcctcttcctcctggcatgggtttgatccctgat i rheMac8.chr13 I 86 C 0 s macFas5.chr13 1375553 126 - 111193037 T--------------------------------------------CCAGCCAggccagctatagccccacagctcccctcaggaccagatgagcagagcctgcacagccctgagcttctgcctctg-ccatcctgcttcctcttcctcctggcatgggtttgatccctgat i macFas5.chr13 I 43 C 0 s macNem1.NW_012011978v1 1403997 126 + 3644372 T--------------------------------------------CCAGCCAggccagctatagccccacagctcccctcaggaccagatgagcagagcctgcacagccctgagcttctgcctctg-ccatcctgcttcctcttcctcctggcatgggtttgatccctgat i macNem1.NW_012011978v1 I 43 C 0 s cerAty1.NW_012000820v1 1357719 126 - 10304083 C--------------------------------------------CCAGCCAggccagctatagccccacagctcccctcaggaccagatgagcacagcctgcacagccctgagcttctgcctctg-ccatcctgcttcctcctcctcctggcatgggtttgatccccgat i cerAty1.NW_012000820v1 I 131 C 0 s chlSab2.chr14 1431253 169 - 107702431 CC-CAGCCAGGCTGACACCACCTGCCAGGTGGCTACACCCATGATCCAGCCAGGCCAGCTATAGCCCCACAGCTCCCCTCAGGACCAGATGAGCAGAGCCTGCACAGCCCTGAGCTTCTGCCTCTG-CCATCCTGTTTCCTCCTCCTCCTGGCATGGGTTTGATCCCCGAT i chlSab2.chr14 C 0 I 1041 s manLeu1.NW_012103754v1 906179 126 - 2200435 C--------------------------------------------CCAGCCAggccagctatagccccacagctcccctcaggaccagatgagcagagcctgcactgccctgagcttctgcctctg-ccatcctgcttcctcctcctcctggcatgggtttgatccctgat i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1341371 169 - 13651311 -CCCAGCCAGGCTGACACCACCTGCCAGGTGGCTACTCCCATGACCCAGCCAggccagctatagccccacagctcccctcaggaccagacgagcagagcctgcacagccctgagcttctgcctctg-ccattctgcttcctcctcctcctggcatgggtttgatccctgat i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1348071 126 - 108792865 --------------------------------------------CCCAGCCAGGCCGGCTGTAGCCCCACTG-TCCCCTCAGGACCAGAGGAGCAGAGCCCGCACAGCCCTGAGCTTCCCGCCCTGCCCATCTTGCTTCCTCCTCCTCCTGGCATGGGTTTGATCCCTAAT i calJac3.chr14 C 0 C 0 s aotNan1.NW_018513311v1 78688 125 + 287728 --------------------------------------------CCCAGCCAGGCCAGCTATAGCCCCACTG-TCCCCTCAGGACCAGAGGAGCAGAGCCTGCACAGCCCTGAGCTTCCCGCCCTTCCCCTCTGGCTTCCTCCTCCTCCTGGCACGGGTTC-ATCCCTAAT i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89984948 562 - 120129022 I e saiBol1.JH378218 1196948 2743 - 7082604 M e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 919940 8 + 5252280 I e dasNov3.JH576208 1661550 270 + 4416731 I a score=2180586.000000 s hg38.chr2_KI270774v1_alt 84877 299 + 223625 aagcattctgtacctcaaatcctgcctcagtgtcttctgcc--agagTGTGGGCTGAGCAGGTGCCTTGAACCAATATCTCAGTGATGACCTCCCAGGAAACTCTAGCCTGCAAAGCCACTCTGCAGCACATCCTGAAAGTACACACCCCTGTGGGTATTTGTCTGACTGTTAGGATAAATTCCAGATTTGGAACTGTGGGTCCAAGGGTATAGGTTAGGAGTCAAAGGGCACTGAGTGCCGCGAGCCAGCCATTTACTCAGAGATCCTACCGAGCAAGCCATGAGACAAAAGCCAGCCAG s panTro5.chr2A 1362476 299 + 111504155 aagcattctgtacctcaaatcctgcctcagtgtcttctgcc--agagTGTGGGCTGAGCAGGTGCCTTGAACCAATATCTCAGTGATGACCTCCCAGGCAACTCTAGCCTGCAAAGCCACTCTGCAGCACATCCTGAAAGTACACACCCCTGTGGGTATTTGTCTGACTGTTAGGATAAATTCCAGATTTGGAACTGTGGGTCCAAGGGTATAGGTTAGGAGTCAAAGGGCACTGAGTGCCGTGAGCCAGCCATTTACTCAGAGATCCTACCGAGCAAGCCATGAGACAAAAGCCAGCCAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1322575 299 + 114371477 aagcattctgtacctcaaatcctgcctcagtatcttctgcc--agagTGTGGGCTGAGCAGGTGTCTTGAACCAATATCTCAGTGATGACCTCCCAGGCAACTCCAGCCTGCAAAGCCACTCTGCAGCACATCCTGTAAGTATACACCCCTGTGGGTATTTGTCTGACTGTTAGGATAAATTCCAGATTTGGAACTGTGGGTCCAAGGGTATAGGTTAGGAGTCAAAGGGCATTGAGTGCCGTGAGCCAGCCATTTACTCAGAGATCCTACCGAGCAAGCCATGAGACAAAAGCCAGCCAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1347464 299 + 1464242 aagcattctgcacctcaaatcctgcctcagtgtcttctgcc--agagTGTGGGCTGAGCAGGTGCCTTGAACCAATATCTCAGTGATGAGCTCACAGGCAACTCCAGCCTGCAAAGCCACTCTGCAGCACATCCTGAAAGTACACACCCCTGTGGGTCTTTGTCTGACTGTTAGGACAAATTCCAGATTTGGAACTGTGGGTCCAAGGGTACAGGTTAGGGGTCAAAGGGCATTGAGTGCCGCAAGCCAGCCATTTACTCAGAGATCCTACCGAGCAAGCCATGAGACAAAAGCCAGCCAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1073080 298 + 81552678 aagcattctgcacctcaaatcctgcctcagtgtcttctgcc--AGAGTGTGGGCTGAGCAGGTGCCTTGAACCAGTATCTCAGTGATGACCGCACAGGCAACTCCAGCCTGCAAAGCCACTCTGCAGCACGTCCTGAACATACACACCCC-GTGGGTATTTGTTTGACTGTGAGGATAAATTCCAGATTTGGAACTGTGGGTCCAAGGGTATAGGTTAGCAGTCAAAGGGCACTGAGTGCCACGAGCCAGCCATTTACTCAGAGACCCTGCTGAGCAAGCCATGAGACAGAAGCCAGCCAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1403278 301 + 108979918 aagcattctgcacctcaaatcctgcctcagtgtcttctgccAGAGAGTGTGGGCTGAGCAGGTGCCTTGAACCAATATCTCAGTGAGGACCGCACAGGCAACTTCAGCCTGCAAAGCCACTCTGCAGCACGCCCTGAACGCACACACCCCTGTGGGTATTTGTCTGACTGTGAGGATAAATTCCAGATTTGGAACTGTGGGTCCAAGTGTATAGGTTAGGGGTCAAAGGGCGCTGAGTGCCATGAGCCGGCCATTTACTCAGAGATCCTGCTGAGTAAGTCATGAGGCAAAAGCCAGGCGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1375679 301 - 111193037 aagcattctgcacctcaaatcctgcctcagtgtcttctgccAGAGAGTGTGGGCTGAGCAGGTGCCTTGAACCAATATCTCAGTGAGGACCGCACAGGCAACTTCAGCCTGCAAAGCCACTCTGCACCACGCCCTGAACGCACACACCCCTGTGGGTATTTGTCTGACTGTGAGGATAAATTCCAGATTTGGAACTGTGGGTCCAAGTGTATAGGTTAGGGGTCAAAGGGCGCTGAGTGCCATGAGCCGGCCATTTACTCAGAGATCCTGCTGAGTAAGTCATGAGGCAAAAGCCAGGCGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1404123 301 + 3644372 aagcattctgcacctcaaatcctgcctcagtgtcttctgccAGAGAGTGTGGGCTGAGCAGGTGCCTTGAACCAATATCTCAGTGAGGACCGCACAGGCAACTTCAGCCTGCAAAGCCACTCTGCAGCACGCCCTGAACGCACACACCCCTGTGGGTATTTGTCTGACTGTGAGGATAAATTCCAGATTTGGAACTGTGGGTCCAAGTGTATAGGTTAGGGGTCAAAGGGCGCTGAGTGCCATGAGCCGGCCATTTACTCAGAGATCCTGCTGAGTAAGTCATGAGGCAAAAGCCAGGCGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1357845 301 - 10304083 aagcattctgcacctcaaatcctgcctcagtgtcttctgccagagAGTGTGGGCTGAGCAGGTGCCTTGAACCAATATCTCAGTGAGGACTGCACAGGCAACTTCAGCCTGCAAAGCCACTCTGCAGCACGCCCTGAACGCACACACCCCTGTGGGTATTTGTCTGACTGTGAGGATAAATTCCAGATTTGGAACTGTGGGTCCAAGTGTATAGGTTAGGGGTCAAAGGGCGCTGAGTGCCATGAGCCGGCCATTTACTCAGAGATCCCGCTGAGTAAGCCATGAGGCAAAAGCCAGGCGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1432463 301 - 107702431 aagcattcTGCACCTCAAATCCTGCCTCAGTGTCTTCTGCCAGAGAGTGTGGGCTGAGCAGGTGCCTTGAACCAATATCTCAGTGAGGACTGCACAGGCAACTTCAGCCTGCAGAGCCACTCTGCAGCACGCCCTGAACGCACTCACCCCTGTGGGTATTTGTGTGACTGTGAGGATAAATTCCAGATTTGGAACTGTGGGTCCACGGGTATAGGTTAGGGGTCAAAGGGCACTGAGTGCCATGAGCCGGCCATTTACTCAGAGATCCTGCTGAGTAAGCCATGAGGCAAAAGCCAGGCGG i chlSab2.chr14 I 1041 C 0 s manLeu1.NW_012103754v1 906305 300 - 2200435 aagcattctgcacctgaaatcctgcctcagtgtcttctgccAGAGAGTGTGGGCTGAGCAGGTGCCTTGAACCAATATCTCAGTGAGGACCGCACAGGCAACTTCAGCCTGCAAAGCCACTCTGCAGCACGCCCTGAACGCACACACCCCTGTGGGTATTTGTCTGACTGTGAGGATAAATTGCAGATTTGGAACTGTGGGTCCAAGTGTATAGGTT-GGGGTCAAAGGGCGCTGAGTGCCATGAGCCGGCCATTTACTCAGAGATCCTGCTGAGTAAGCCATGAGGCAAAAGCCAGGCGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1341540 301 - 13651311 aagcattctgcacctcaaatcctgcctcagtgtcttctgccAGAGAGTGTGGGCTGAGCAGGTGCCTTGAACCAGTATCTCAGTGAAGACTGCACAGGCAACTTCAGCCTGCAAAGCCGCTCTGCAGCATGCCCCGAACGCACACACCCCTGTGGGTATTTGTCTGACTGTGAAGATAAATTCCAGATTTGGAACTGTGGGTCCAAGGGTATAGGTTAGGGGTCAAAGGGCACTGAGTGCCATGAGCCAGCCATTTACTCAGAGATCCTGCTGAGCAAGCCATGAGGCAAAAGCCAGGCGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1348197 293 - 108792865 AAGCATTCTGCACTTGAAATCCTACCTCAGCGTCT-CTGCCAGAGAGTG-GGGCTGAGCAGCTGCCTTGAACCAATATCTCAGTGAGGAGCGCATAGGCAGCTCCAGCCTGCAAAGCCACTCTGCAGCACATCCTGAA--CATACACCCCTTTGGGCATTT-CCTGACTGTTAGAATAAATTCCACATTTGGAGCTGTGGGTCCAAGGATATGGTTTAGATGTCAAAGGGAATCGGGTGCC-CAAGCCAGCCATTTACTCAG--ATCCTGCTGAGCAAGCCATGAGAGAAAAGCTAGGAAG i calJac3.chr14 C 0 C 0 s aotNan1.NW_018513311v1 78813 296 + 287728 AAGCATTCTGCACTCGAAATCCTGCCTCAGTGTCTCCTGCCAGGGAGTG-GGGCTGAGCAGCTGCCGTGAACCAATATCTCAGTGATGAGCGCATGGGCAGCTCCAGCCTGCAAAGCCACTCTGCAGCACATCCTGAA--CATACACCCCTTTGGGCATTT-CCTGACTGTTAGCATAAATTCCAGATTTGGAACTGTGGGTCCAAGGGTATAGTTTAGATGTCAAAGGGAATTGGGTGCC-CAAGCCAGCCATTTACTCAGACATCCTGCTGAGCAAGCCATAAGAGAAAAGCTAGCAAG i aotNan1.NW_018513311v1 C 0 I 640 e mm10.chr12 89984948 562 - 120129022 I e saiBol1.JH378218 1196948 2743 - 7082604 M e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 919940 8 + 5252280 I e dasNov3.JH576208 1661550 270 + 4416731 I a score=30118.000000 s hg38.chr2_KI270774v1_alt 85176 6 + 223625 ACCCAC s panTro5.chr2A 1362775 6 + 111504155 ACCCGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1322874 6 + 114371477 ACCCAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1347763 6 + 1464242 ACCCAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1073378 6 + 81552678 CCCCAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1403579 6 + 108979918 CCCCAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1375980 6 - 111193037 CCCCAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1404424 6 + 3644372 CCCCAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1358146 6 - 10304083 CCCCAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1432764 6 - 107702431 CCCCAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 906605 6 - 2200435 CCCCAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1341841 6 - 13651311 CCCCAC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1348490 6 - 108792865 TCCTGT i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 79109 640 + 287728 I e mm10.chr12 89984948 562 - 120129022 I e saiBol1.JH378218 1196948 2743 - 7082604 M e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 919940 8 + 5252280 I e dasNov3.JH576208 1661550 270 + 4416731 I a score=178173.000000 s hg38.chr2_KI270774v1_alt 85182 20 + 223625 GCAGGCTGTG--TGAGTGGGCA s panTro5.chr2A 1362781 20 + 111504155 GCAGGCTGTG--TGAGTGGGCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1322880 20 + 114371477 ACAGGCTGTG--TGAGTGGGCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1347769 20 + 1464242 GCAGCCTGTG--TGAGTAGGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1073384 20 + 81552678 GCAGGCTGTG--TGAGTGGGCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1403585 20 + 108979918 GCAGGCTGTG--TGAGTGGGCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1375986 20 - 111193037 GCAGGCTGTG--TGAGTGGGCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1404430 20 + 3644372 GCAGGCTGTG--TGAGTGGGCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1358152 20 - 10304083 GCAGGCTGTG--TGAGTGGGCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1432770 20 - 107702431 GCAGGCTGTA--TGAGTGGGCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 906611 20 - 2200435 GCAGGCTGTG--TGAGTGGGCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1341847 20 - 13651311 GCAGGCTGTG--TGAGTGGACG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1348496 22 - 108792865 GCAGGCTGTGACTGAGTGGGCA i calJac3.chr14 C 0 I 681 s saiBol1.JH378218 1199761 20 - 7082604 GCAGGCTGTG--TGGGTGAGCA i saiBol1.JH378218 M 2743 C 0 s aotNan1.NW_018513311v1 79749 20 + 287728 GCAGGCTGTG--TGAGTGAGCG i aotNan1.NW_018513311v1 I 640 C 0 e mm10.chr12 89984948 562 - 120129022 I e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 919940 8 + 5252280 I e dasNov3.JH576208 1661550 270 + 4416731 I a score=903773.000000 s hg38.chr2_KI270774v1_alt 85202 108 + 223625 GGTGGAGGGCACCCAAATGCTGCTTCCTGGATGCTCCTCATCTGGATCAGAGAATGTTGCACAGACTTCAGGATGAAAGGGCTGACGGTTACCTCTGGCCACATCTCC s panTro5.chr2A 1362801 108 + 111504155 GGTGGAGGGCACCCAAATGCTGCTTCCCGGCTGCTCCTCATCTGGATCAGAGAATGTTGCACAGACTTCAGGATGAAAGGGCTGACGGTTACCTCTGGCCACATCTCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1322900 108 + 114371477 GGTGGAGGGCACCCAAATGCTGCTTCCTGGCTGCTCCTCATCTGGATCAGAGAATGTTGCACAGACTTCAGGATGAAAGGGCTGACGGTTACCTCTGGCCACATCTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1347789 108 + 1464242 GGTAGAGGGCACCCAAATGCTGCTTCCTGGCTGCTCCTCATCTGGATCAGAGAATGTTGCACAGACTTCAGGATGGAAGGGCTGACGGTTACCTCTGGCCAAATCTCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1073404 108 + 81552678 GACGGAGGGCACCCAAATGCTGCTTCCTCGCTGCCCCTCATCTGGATCAGAGAACGGTGCACAGACTTCAGGATGAAAGGGCTGACAGTCACCTCTGGCCAAATCTCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1403605 108 + 108979918 GGTGGAGGGCCCCCAAATGCTGCTTCCTGGTCACTCCTCATCTGGATCAGAGAACGTTGCACAGACTTCAGGATGAAAGGGCTGACGGTTACCTCTGGCCAAATCTCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1376006 108 - 111193037 GGTGGAGGGCCCCCAAATGCTGCTTCCTGGTCACTCCTCATCTGGATCAGAGAACGTTGCACAGACTTCAGGATGAAAGGGCTGACGGTTACCTCTGGCCAAATCTCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1404450 108 + 3644372 GGTGGAGGGACCCCAAATGCTGCTTCCTGGTCACTCCTCATCTGGATCAGAGAACGTCGCACAGACTTCAGGATGAAAGGGCTGACGGTTACCTCTGGCCAAATCTCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1358172 108 - 10304083 GGTGGAGGGCCCCCAAATGCTGCTTCCTGGTCACTCCTCATCTGGATCAGAGAACGTCGCACAGACTTCAGGATGAAAGGGCTGACGGTTACCTCTGGCCAAATCTCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1432790 108 - 107702431 GGTGGAGGGCCCCCAAGTGCTGCTTCCTGGTCACTCCTCATCTGGATCAGAGAACGTCGCACAGACTTCAGGATGAAAGGGCTGACGGTTACCTCTGGCCAAATCTCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 906631 108 - 2200435 GGTGGAGGGCCCCCAAATGCTGCTTCCTGGTCACTCCTCATCTGGATCAGAGAACGTTGCACAGACTTCAGGATGAAAGGGCTGACGGTTATCTCTGGCCAAATCTCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1341867 108 - 13651311 GGTGGAGGGCCCCCAAATGCTGCTTCCTGGTCACTCCTCATCTGGATCAGAGAGCGTTGCACAGACTTCAGGATGAAAGGGCTGATGGTTACCTCTGGCCAAATCTCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1349199 108 - 108792865 GGCGGAGGGAGCTCTGGTGCTTCTTCCTGGCTGCTCCTTATCCAGATCAGAGAATGTCGCACAGACTTCAGAATGAAAGGGCTAATGGTGACCTCTGGCCAAATCTCC i calJac3.chr14 I 681 C 0 s saiBol1.JH378218 1199781 97 - 7082604 GGTGGAGGGTGCCCAGGT-----------GCTGCACCTCATCCAGGTCAGAGAATGTCGCACAGACTTCACGATGAAAGGGCTAATGGTGACCTCTGGCTAAATCTCC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 79769 108 + 287728 GGCAGAGGGCACTCAGGTACTGCTTCCTGGCTGCTTCTCATCCAGATCAGAGAATGTCGCACAGACGTCAGGATGAAAAGGCTAATGGTGACCTCTGGCCAAATCTCC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89984948 562 - 120129022 I e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 919940 8 + 5252280 I e dasNov3.JH576208 1661550 270 + 4416731 I a score=1291952.000000 s hg38.chr2_KI270774v1_alt 85310 161 + 223625 ATCCTGTGGATTC-CGTATGCAGCCAAGTGGGCCCCAAGCCTCTCCACCTAACCA--------ATGCCTC-AGATGCAAGTGGCCCAGGGCTCATCCAGGGACCACCTGTAAAGGCCACC-CTGCCC-AGTGAGC-TGTGGTCGGCATCCAC-GGGAGGACTCCCTGACTCTGGG s panTro5.chr2A 1362909 161 + 111504155 ATCCTGTGGATTC-CGTATGCAGCCAAGTGGGCCCCAAGCCTCTCCACCTAACCA--------ATGCCTC-AGATGCAAGTGGCCCAGGGCTCATCCAGGGACCACCTGTAAAGGCCACC-CTGCCC-AGTGAGC-TGCGGTCGGCATCCAT-GGGAGGACTCCCTGACTCTGGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1323008 161 + 114371477 ATCCTGTGGATTC-CATATGCAGCCAAGAGGGCCCCAAGCCTCTCCACCTAACCA--------ATGCCTC-AGATGCAAGTGGCCCAGGGCTCATCCAGGGACCACCTGTAAAGGCCACC-CTGCCC-AGTGAGC-TGCGGTCGGCATCCAC-GGGAGGACTCCCTGACTCTGGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1347897 162 + 1464242 ATCCTGTGGATTC-TGTATGCAGCCAAGTGGGCCCCAAGCCTCTCCACCTAACCA--------ATGCCTC-AGATGCAAGTGGCCCAGGGCTCATCCAGGGACCACCTGTAAAGGCCACG-CTGCCC-AGTGAGC-TGCGGTCGGCATCCACGGGGAGGACTCCCTGACTCTGGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1073512 161 + 81552678 ATGCTGTGGATTC-TGTATGCAGCCAAGTGGGCCCTAAGCCTCTCCACCTAACCA--------ATGCCTC-AGATGCAAGTGGCCCAGGGCTCATCCAGGGACCACCTGTAAAGGCCACC-CTGCCC-AGTGAGC-TGGGGTCGGCATCCAT-GGGAGGACTCCCTGACTCTGGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1403713 161 + 108979918 ATCCTGTGGATTC-TGTATGCAGCCAAGTGGGCCCCAAGCCTCTCCACCTAACCA--------GTGACTC-AGATGCAAGTGGCCCAGGGCTCATCCAGGGACCACCTGTAAAGGCCACC-CTGCCC-AGTGAGC-TAGGGTCAGCATCCAT-GGGAGGACTCCCTGACTCTGTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1376114 161 - 111193037 ATCCTGTGGATTC-TGTATGCAGCCAAGTGGGCCCCAAGCCTCTCCACCTAACCA--------GTGACTC-AGATGCAAGTGGCCCAGGGCTCATCCAGGGACCACCTGTAAAGGCCACC-CTGCCC-AGTGAGC-TAGGGTCAGCATCCAT-GGGAGGACTCCCTGACTCTGTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1404558 161 + 3644372 ATCCTGTGGGTTC-TGTATGCAGCCAAGTGGGCCCCAAGCCTCTCCACCTAACCA--------GTGACTC-AGATGCAAGTGGCCCAGGGCTCATCCAGGGACCACCTGTAAAGGCCACC-CTGCCC-AGTGAGC-TAGGGTCAGCATCCAT-GGGAGGACTCCCTGACTCTGTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1358280 161 - 10304083 ATCCTGTGGATTC-TGTACGCAGCCAAGTGGGCCCCAAGCCTCTCCACCTAACCA--------GTGACTC-AGATGCAAGTGGCCCAGGGCTCATCCAGGGACCACCTGTAAAGGCCACC-CTGCCC-AGTGAGC-TGGGGTCAGCATCCAT-GGGAGGACTCCCTGACTCTGTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1432898 161 - 107702431 ATCCTGTGGATTC-TGTGTGCAGCCAAGTGGGCCCCAAGCCTCTCCACCTAACCA--------GTGCCTC-AGATGCGAGTGGCCCAGGGCTCATCCAGGGACCACCTGTGAAGGCCACC-CTACCC-AGTGAGC-TGGGGTCAGCATCCAT-GGGAGGACTCCCTGACTCTGTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 906739 161 - 2200435 ATCCTGTGGATTC-TGTATGCAGCCAAGGGGGCCCCAAGCCTCTCCACCTAACCA--------GTGACTC-AGATGCAAGTGGCCCAGGGCTCATCCAGGGACCACCTGTAAAGGCCACC-CTGCCC-AGTGAGC-TGGGGTCAGCATCCAT-GGGAGGACTCCCTGACTCTGTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1341975 161 - 13651311 ATCCTGTGGATTC-CGTATACAACCAAGTGGGCCCCAAGCCTCTCCACCTAACCA--------ATGCCTC-AGATGTGAGTGGCCCAGGGCTCATCCAGGGATCACCTGTAAAGGCCACC-CTGCCC-AGTGAGC-TGGGGTCGGCATCCAC-GGGAGGACTGCCTGACTCTGGG i colAng1.NW_012118821v1 C 0 M 691 s calJac3.chr14 1349307 141 - 108792865 AT-CTGTGGATTC-CTTATGCAGCCAGGTGGGCA--------CTCCATCTAACCA--------ATGCCTC-AGATGGGGGTGAC-----------CCAGGGACCACTTGTAAAGGCCTCT-CTGCCC-AGTGAGC-TGGGGTCTGCGTCTAT-GGGAGAACTCCCTGACTCTGGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1199878 139 - 7082604 AC-CTGTGGATTC-CTTATGCAGCCAAGTGGACA--------CTCCACCTAACCA--------ATGCCTCTTGACGTGGGTGAC-----------CCAGGGACCCCCTGTAAAGG---CT-CTGCGC-AGTGAGC-TGCGGTCGGCATCTGT-GGGAGGACTCTCTGACTCTGGG i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 79877 141 + 287728 AT-GTGTGGATTC-CTTATGCAGCCAAATGGGCC--------CTCCACCGAACCA--------ATGCCTC-AGATGCGGGTGAC-----------CCAGGGACCACCTGTAAAGGCCTTT-CTGCCC-GGTGAGC-TGGGGTCGGCGTCCAT-GGGAGGACTCTCTGACTCTGGG i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1661820 161 + 4416731 ATCTTGTGGATTCACAGATTCAACTAAGTGGGCT--GAGTTTTTGCATCCAATAATCTTTGGCTTGTTTT-AGAAACACAAAGTC----------ACAAGAATCGCCTCTAAAGGCCTCCTTTGCCCAAGTCTGCATGGGGTGGGAATTTGA-TCACCCATACTCAGGCCTTGGG i dasNov3.JH576208 I 270 C 0 e mm10.chr12 89984948 562 - 120129022 I e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 919940 8 + 5252280 I a score=951579.000000 s hg38.chr2_KI270774v1_alt 85471 143 + 223625 GGCAGATAGTGGAAGAGGAAGAGTACCCCCTAAATCCCACAGGGAAGGCACAGGAAGCA-----------AGACTGCTGGTAATGCCTGGCCCCGTGGAATCTCCAGACCCCGAAGGACCTGCTTAGGAAGAGACGGGAGC--ACAGAGCAAGCAG s panTro5.chr2A 1363070 143 + 111504155 GGCAGATAGTGAAAGAGGAAGAGTACCCCCTAAATCCCACAGGGAAGGCACAGGAAGCA-----------AGACTGCTGGTAATGCCTGGCCCAGTGGAATCTCCAGACCCCGAAGGACCTGCTTAGGAAGAGACGGGAGC--ACAGAGCAAGCAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1323169 143 + 114371477 GGCAGATAGTGAAAGAGGAAGAGTACCCCCTAAATCCCACAGGGAAAGCACAGGAAGCA-----------AGACTGCTGGTAATGCCTGGCCCAGTGGAATCTCCAGACCCCGAAGGACCTGCTTAGGAAGAGACGGGAGC--ACAGAGCAAGCAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1348059 143 + 1464242 GGCAGATAGTGAAAGAGGAAGAGTACCCCCTAAATCTCACAGGGAAGGCACAGGAAGCA-----------AGACTGCTGGTAATGCCTGGCCCAGTGGAATCTCCAGACCCCGAAGGACCTGCTTAGGAAGAGACGGGAGC--ACAGAGCAAGCAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1073673 143 + 81552678 GGCAGATAGTGAAAGAGGAAGGGGACCCCCTAAATCCCACAGGGAAGGCGCAGGAAGCA-----------AGACTGCTGGTAATGCCTGGCCCAGTGGAATCTCCAGAGCCTGAAGGACCTGCTTAGGAAGAGACGGGAGC--ACAGagcaagcag i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1403874 141 + 108979918 GGCAGATAATGAAAGAGGAAGGGTACCCCTCAA--TCCACAGGGAAGGCACAGAAAGCA-----------AGACCACTGGTAACGCCTGGCCCAGTGGCATCTCCAGACGCCAAAGGACCTGCTTAGGAAGCGGGGGGAGC--ACAGAGCCAGTGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1376275 141 - 111193037 GGCAGATAATGAAAGAGGAAGGGTACCCCTCAA--TCCACAGGGAAGGCACAGAAAGCA-----------AGACCACTGGTAACGCCTGGCCCAGTGGCATCTCCAGACGCCAAAGGACCTGCTTAGGAAGCGGGGGGAGC--ACAGAGCCAGTAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1404719 141 + 3644372 GGCAGATAATGAAAGAGGAAGGGTACCCCTCAA--TCCACAGGGAAGGCACAGAAAGCA-----------AGACCACTGGTAACGCCTGGCCCAGTGGCATCTCCAGACGCCAAAGGACCTGCTTAGGAAGCGGGGGGAGC--ACAGAGCCAGTAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1358441 141 - 10304083 GGCAGATAATGAAAGAGGAAGGGTACCCCTCAA--TCCACAGGGAAGGCACAGAAAGCA-----------AGACCACTGGTAACGCCTGGCCCAGTGGCATCTCCAGACCCCAAAGGACCTGCTTAGGAAGCAGGGGGAGC--ACAGAGCCAGTAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1433059 141 - 107702431 GGCAGATAATGAAAGAGGAAGGGTACCCCTCAA--TCCACAGGGAAGGCACAGAAAGCA-----------AGACCACTGGTAACGCCTGGCCCAGTGGCATCTCCAGACCCCAAAGGACCTGCTTAGGAAGCGGGGGGAGC--ACAGAGCCAGTAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 906900 130 - 2200435 GGCAGATAATGAAAGAGGAAGGGTACCCCTCAA--TCCACAGGGAAGGCACAGAAAGCA-----------AGACCACTGGTAACGCCTGGCCCAGTGGCATCTCCAGACCCCAAAGAACCTGCTTAGGAAGCGGGGGGAGC-------------AC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1349448 140 - 108792865 GGCAGAT-GTGAAAAAGGAAGAGTGCCCCGTAAATCCCACAGGAAAGGCACAGAAAGCA-----------AGACCGCTGGTAATGCCTGGGCCGGTGGAA--TCCAGACCTCGAAGGGCCTGCTTAGGAAGAGAGGGAAGC--ACAGAGCAGACAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1200017 141 - 7082604 GGCAGAT-GTGAAAAAGGAAGGATGACCGGTGAATCCCACAGGAAAGGCACAGAAAGCA-----------ACGCCGCTGGTAATGCCT-GGCCCATGGAATCTCCAGACCCCGAAGGGCCTGCTTAGGAAGAGAGAGAAGC--CCAGAGCGGACAC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 80018 141 + 287728 GGCAGAT-GTGAAAAAGGAAGGGTAGCCCATAAATCCCACAGGAAAGGCACAGAGATCA-----------AGACTGCTGGTAACGCCT-GGCCAGTGGAGTCTCCAGACCCTGAAGGGCCTGCTTAGGAAGAGAGGGAAGC--ACAGAGCAGACAC i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1661981 156 + 4416731 TGCCGGCAGAGAGAAAGGAAGGGTGAATCCTAAATTCCCTATTGAAGTCACAGTAACCATAAACCAGAGGAATCCACCAGCAGAAATCAGCCAAAAAGACTTTTCAGAGTCCAGCCAATCCGGTGAGGAAAAGAAGATAGTAAATAGAGTGAGAAG i dasNov3.JH576208 C 0 I 75 e mm10.chr12 89984948 562 - 120129022 I e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 919940 8 + 5252280 I e colAng1.NW_012118821v1 1342136 691 - 13651311 M a score=187179.000000 s hg38.chr2_KI270774v1_alt 85614 30 + 223625 GGAGCCAGCCAGTCTGGGAGCCA---------------------------ACACGGA s panTro5.chr2A 1363213 30 + 111504155 GGAGCCAGCCAGTCTGGGAGCCA---------------------------ACACGGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1323312 30 + 114371477 GGAGCCAGCCAGTCTGGGAGCCA---------------------------GCACATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1348202 30 + 1464242 GGAGCCAGCCAGTCTGAGAGCCG---------------------------GCACGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1073816 57 + 81552678 ggagccagccagtctgggagccagcatggagccagccagTCTGGGAACCGGCACAGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1404015 30 + 108979918 AGAGCCAGCCAGTCTGGGAGCAG---------------------------GCACAGA i rheMac8.chr13 C 0 I 14 s macFas5.chr13 1376416 30 - 111193037 AGAGCCAGCCAGTCTGGGAGCAG---------------------------GCACAGA i macFas5.chr13 C 0 I 3 s macNem1.NW_012011978v1 1404860 30 + 3644372 AGAGCCAGCCAGTCTGGGATCAG---------------------------GCACAGA i macNem1.NW_012011978v1 C 0 I 14 s cerAty1.NW_012000820v1 1358582 30 - 10304083 GGAGCCAGCCAGTCTGGGAGCAG---------------------------GCACAGA i cerAty1.NW_012000820v1 C 0 I 3 s chlSab2.chr14 1433200 30 - 107702431 AGAGCCAGCCAGTCTGGGAGCAG---------------------------GCACAGA i chlSab2.chr14 C 0 I 3 s manLeu1.NW_012103754v1 907030 30 - 2200435 AGAGCCAGCCAGTCTGGGAGCAG---------------------------GCACAGA i manLeu1.NW_012103754v1 C 0 I 14 s calJac3.chr14 1349588 26 - 108792865 AG----AGCCAGCCTGGGAGCAG---------------------------GCGCAGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1200158 28 - 7082604 AG--CCAGCCAGCCTGGGAGCAG---------------------------GCACAGA i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 80159 30 + 287728 AGAGCCAGCCAGCCTGGGAGCAG---------------------------GCGCAGA i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89984948 562 - 120129022 I e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 919940 8 + 5252280 I e dasNov3.JH576208 1662137 75 + 4416731 I e colAng1.NW_012118821v1 1342136 691 - 13651311 M a score=-4729.000000 s hg38.chr2_KI270774v1_alt 85644 12 + 223625 GCCAAGGGGGGT s panTro5.chr2A 1363243 12 + 111504155 GCCAAGGGGGGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1323342 12 + 114371477 GCCAAGGGGGGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1348232 12 + 1464242 GCCAAGGCGGGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1073873 12 + 81552678 GCCAAGGGCAGT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1376449 11 - 111193037 GCCACAGAGCA- i macFas5.chr13 I 3 C 0 s cerAty1.NW_012000820v1 1358615 11 - 10304083 GCCACGGAGGG- i cerAty1.NW_012000820v1 I 3 C 0 s chlSab2.chr14 1433233 11 - 107702431 ACCACAGAGCG- i chlSab2.chr14 I 3 C 0 s calJac3.chr14 1349614 4 - 108792865 AACA-------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1200186 4 - 7082604 AGCT-------- i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 80189 4 + 287728 AACA-------- i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89984948 562 - 120129022 I e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 919940 8 + 5252280 I e dasNov3.JH576208 1662137 75 + 4416731 I e colAng1.NW_012118821v1 1342136 691 - 13651311 M e manLeu1.NW_012103754v1 907060 14 - 2200435 I e macNem1.NW_012011978v1 1404890 14 + 3644372 I e rheMac8.chr13 1404045 14 + 108979918 I a score=2484812.000000 s hg38.chr2_KI270774v1_alt 85656 378 + 223625 GGG--GGATTTCCTGTTTCCTCAGtgaattagtccattttcgtgctactgataaagacatacccgagactggtcaatttatataaaggaaaagagggttaatgggctcacaaattcatatggctggggaggcctcacaatcatggcagaaggtgaaaggcatgtcttacatggtggcaggcaagagaaaataagagccaagcaaagggggaaacttcttataaaaccatcagatctcatgagacttactcagcaccaaccaggagaacagtaggggaaaaactg-cccccaggatttaattatctcccactgggtccctcccacagcacctgggaattatgggagctacaattcaagatgagattgag-gggggacacatcc s panTro5.chr2A 1363255 375 + 111504155 GGG--GGATTTCCTGTTTCCTCAGtgaattagtccattttcgtgctactgataaagacatacccgagactggtcaatt--tataaaggaaaagagggttaatgggctcacaatttcatatggc-gggggggcctcacaatcatggcagaaggtgaaaggcatgtcttacatggtggcaggcaagagaaaataagagccaagcaaagggggaaacttcttataaaaccatcagatctcatgagacttactcagcaccaaccaggagaacagtagggggaaaactg-cccccaggatttaattatctcccactgggtccctcccacagcacctgggaattatgggagctacaattcaagatgagattgag-gggggacacatcc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1323354 376 + 114371477 GGG--GGATTTCCTGTTTCCTCAGtgaattagtccattttcgtgctactgataaagacatacccgagactggtcaatt--tataaaggaaaagagggttaatgggctcacaatttcatatggctggggaggcctcacaatcatggcagaaggtgaaaggcatgtcttacatggtggcaggcaagagaaaatgagagccaagcaaagggggaaacttcttataaaaccatcagatctcatgagacttactctgtaccaaccaggagaacagtaggggtaaaactg-cccccaggatttaattatctcccactgggtccctcccacagcacctgggaattatgggagctacaattcaagatgagattgag-gggggacacatcc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1348244 377 + 1464242 GGG--GGATTTCCTGTTTCCTCAGtgaattagtccattttcgtgctactgataaagacatacccgagactggtcaatttatataaaggaaaagagggttaatgggctcacaatttcatatggctggggaggcctcacaatcatggcagaaggtgaaaggcatgtcttacatggtggcaggcaagagaaaatgagagccaagcaaagggggaaacttcttataaaaccatcagatctcatgagacttactcagcaccaatcaggagaacagtagggggaaaactg-ccaccaggatttaattatctcccactgggtccctcccacagcacctgggaattatgggagctacaattcaagatgagattga--gggggacacatcc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1073885 375 + 81552678 GGGGCGGATTGCCCATTTCCTCAGtgaattagtccattttcatgctactgataaagacataccagagattggtcaatt--tataaaggaaaaggaggttaatgggctcacaatttcatatggctggggaggcctcacaatcatggcagaagatgaaaggcatgtctcacatgatggcaggcaagaaaaaatgagaaccaagcaaaaggggaaacttcttataaaaccatcagatctcatgagacttactcagtac----caggagaccagtagggggaaaactg-cccccaggatttaattatctcccactgggtccctcccacaacacctgggaattaggggagctacaattcaagatgagattgagcggcggacacatcc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1404059 370 + 108979918 GGG--GGATTTCCCATTTCCTGAGTGAGttagtccattttcgtgctactgataaagacatacctgagactggttaatt--tataaaggaaaagagggttaatggacttacaatttcatatgactggggaggcctcacaatcatggcagatggtgaaaggcatgtcttacatggtggcaggcaagaaacaatgagagccaagcaaaaggggaaacttcttataaaaccatcagatgtcatgagacttactcagtat----caggagaacagtagggggaaaactg-cccccaagatttaattatctcccactgggtccctcccacaacac--cggagttgtgggagctacagttcaaaatgagattgag-tggggacacatcc i rheMac8.chr13 I 14 C 0 s macFas5.chr13 1376460 372 - 111193037 GGG--GGATTTCCCATTTCCTGAGTGAGttagtccattttcgtgctactgataaagacatacctgagactggttaatt--tataaaggaaaagagggttaatggacttacaatttcatatgactggggaggcctcacaatcatggcagatggtgaaaggcatgtcttacatggtggcaggcaagaaacaatgagagccaagcaaaaggggaaacttcttataaaaccatcagatgtcatgagacttactcagtac----caggagaacagtagggggaaaactg-cccccaagatttaattatctcccactgggtccctcccacaacacgtgggagttgtgggagctacagttcaaaatgagattgag-tggggacacatcc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1404904 372 + 3644372 GGG--GGATTTCCCATTTCCTGAGTGAGttagtccattttcatgctactgataaagacatacctgagactggttaatt--tataaaggaaaagagggttaatggacttacaatttcatatgactggggaggcctcacaatcatggcagatggtgaaaggcatgtcttacatggtggcaggcaagaaacaatgagagccaagcaaaaggggaaacttcttataaaaccatcagatgtcatgagacttactcagtac----caggagaacagtagggggaaaactg-cccccaagatttaattatctcccactgggtccctcccacaacacgtgggagttgtgggagctacagttcaaaatgagattgag-tggggacacatcc i macNem1.NW_012011978v1 I 14 C 0 s cerAty1.NW_012000820v1 1358626 373 - 10304083 GGG--GAATTTCCCATTTCCTGAGTGAGttagtccattttcgtgctactgataaagacatacctgagactggttaatt--tgtaaaggaaaagagggttaacggacttacaatttcatatgactggggaggcctcacaatcatggcagatggtgaaaggcacgtcttacatggtggcaggcaagaaacaatgagagccaagcaaaaggggaaacttcttataaaaccatcagatctcatgagacttactcagtac----caggagaacagtaggggggaaactgccccccaagatttcattatctcccactgggtccctcccacaacacgtgggagttgtgggagctacaattcaagatgagattgag-tggggacacatcc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1433244 369 - 107702431 GGG--GGATTTCCCGTTTCCTGAGTGAGttagtccattttcatgctactgataaagacatacctgagactggttaatt--tataaaggaaaagagggttaatggacttacaatttcatacggctggggaggcctcacaatcatggcagatggtgaaaggcatgtcttacatggtggcaggcaagaaacaatgagagccaagcaaaaagggaaacttcttataaaaccatcagatctcatgagacttactcagtac----caggagaacagta-gggggaaactg-cccccaagatttaattatctcccac--ggtccctcccacaacatgtgggagttgtgggagctacaattcaagatgagattgag-tggggacacatcc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 907074 372 - 2200435 GGG--GTATTTCCCATTTCCTGAGTGAGttagtccattttcgtgctactgataaagacatacctgagactggttaatt--tgtaaaggaaaagagggttaacggacttacaatttcatatgactggggaggcctcacaatcatggcagatggtgaaaggcacgtcttacatggtggcaggcaagaaacaatgagagccaagcaaaaggggaaacttcttataaaaccatcagatctcatgagacttactcagtac----caggagaacagtaggggggaaactg-cccccaagatttaattatctcccactgggtccctcccacaacacatgggagttgtgggagctacaattcaagatgagattgag-tggggacacatcc i manLeu1.NW_012103754v1 I 14 C 0 s calJac3.chr14 1349618 357 - 108792865 ------------CCACTTCCTCAGtgtattagtccagttt-atgctgctgataaagacacacttgagactgggtaatt--gataagggaaaagagggttaatggactgacagttccacatggc--gggaggcctcccaatcatggtggaaggtgaaagacttgtcttacatggtggcagcctagaataaatgagagccaggcgaaacgggaaactccttaccaaaccatcagatctcatgagacttcttcactac----caggagaactgtgtggggaaacctg-cccccatgacgtaacgatctcccactgggtccc-cccacaacacatgggaattatgggaacta-aattcaggatgagactgag-tggggacacagcc i calJac3.chr14 C 0 I 71 s saiBol1.JH378218 1200190 355 - 7082604 ------------CCGCCTCCTCAGtgtattagtccagtgt-atgctgctgataaagacacacttgagactgggtcact--gataaaggaaaagagggttaatggactgactgttccacatagc--gggaggcctcaaaattacggtggaaggtgaaaggcttgtctcacatgctggcagcctggaatgaatgagagccaagggaaacgggaaactccttacaaaaccatcaggtctcatgagacttcttcactac----ccggagaacagtatggggaaacc-g-cccccgtgatgtaacggtcgcccactgggtccc-cccacgacacatgggaattatgggaacta-aatccaaggtgagactgag-c-gggacatggcc i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 80193 356 + 287728 ------------CCGCTTCCTCGGtgtatca-tccagttt-atgctgctgatgaagacacacttgagactgggtaatt--gataaaggaaaagagggttcatggactgacagctccacatggctggggaggcctcacagtcatggtggaaggtgaaaggcttgtcttacatggtggcagcctggaataaatgagagccaagcgaaacgggaaactccttacaaaaccatcagatctc--gagacttcttcactac----caggagaacagcgtggggaaagctg-ctcccgtgatgtaacgatctcgcactgggtccc-cccacaacacatgggaattatgggaacta-aattcaagatgagactgag-tggggacacagcc i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89984948 562 - 120129022 I e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 919940 8 + 5252280 I e dasNov3.JH576208 1662137 75 + 4416731 I e colAng1.NW_012118821v1 1342136 691 - 13651311 M a score=96228.000000 s hg38.chr2_KI270774v1_alt 86034 19 + 223625 gaaccatatcaCCCCATAT s panTro5.chr2A 1363630 19 + 111504155 gaaccatatcaCCCCATAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1323730 19 + 114371477 gaaccatatcaCCCCATAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1348621 19 + 1464242 gaaccatatcaCCCCATAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1074260 19 + 81552678 aaaccgtatcaCCCCATAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1404429 19 + 108979918 aaacggtatcaCCCCATAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1376832 19 - 111193037 aaacggtatcaCCCCATAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1405276 19 + 3644372 aaacggtatcaCCCCATAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1358999 19 - 10304083 aaacggtatcaCCCCATAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1433613 19 - 107702431 aaacggtatcaCCCCATAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 907446 19 - 2200435 aaacggtatcaCCCCATAT i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1200545 19 - 7082604 aaaccCCGGCACCCAGCGC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 80549 19 + 287728 aaaccCCAGCACCCGGTAC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89984948 562 - 120129022 I e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 919940 8 + 5252280 I e dasNov3.JH576208 1662137 75 + 4416731 I e calJac3.chr14 1349975 71 - 108792865 I e colAng1.NW_012118821v1 1342136 691 - 13651311 M a score=1302.000000 s hg38.chr2_KI270774v1_alt 86053 2 + 223625 TT s panTro5.chr2A 1363649 2 + 111504155 GT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1323749 2 + 114371477 TT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1348640 2 + 1464242 TT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1074279 2 + 81552678 TT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1404448 2 + 108979918 TT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1376851 2 - 111193037 TT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1405295 2 + 3644372 TT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1359018 2 - 10304083 TT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1433632 2 - 107702431 TT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 907465 2 - 2200435 TT i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1200564 1 - 7082604 T- i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 80568 1 + 287728 T- i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1662212 2 + 4416731 TT i dasNov3.JH576208 I 75 C 0 e mm10.chr12 89984948 562 - 120129022 I e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 919940 8 + 5252280 I e calJac3.chr14 1349975 71 - 108792865 I e colAng1.NW_012118821v1 1342136 691 - 13651311 M a score=1170135.000000 s hg38.chr2_KI270774v1_alt 86055 168 + 223625 tgtacatcttgaatttggaaactgagcgccagtttgtttctccagaaagg--ttcccatctgcatttccaccagtggtgaatgtgtgagtccttcatttccggcatcctcattggagcca-ccattattgcatcttt-agtcactcgcaatatgggaaaagataatgtc-tca s panTro5.chr2A 1363651 167 + 111504155 TGTACATCTTGaatttggaaactgagcgccagtttgtttctccagaaagg--ttcccatctgcatttccacc-gtggtgaatgtgtgagtccttcatttccggcatcctcattggagcca-ccattattgcatcttt-agtcactcgcaatatgggaaaagataatgtc-tca i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1323751 168 + 114371477 TGTACATCTTGaatttggaaactgagcgccagtttgtttctccagaaagg--ttcccatctgcatttctaccagtggtgaatgtgcgagtccttcatttccagcatcctcattggagcca-ccatcattgcatcttt-agtcactcgcaatatgggaaaagataatgtc-tca i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1348642 168 + 1464242 TGTACATCTTGaatttgcaaactgagtgccagtttgtttctccagaaagg--ttcccatctgcatttccaccagtggtgaatgtgcaagtccttcatttccggcatcctcattggagcca-ccattattgcatcttt-agtcactcacaatatgggaaaagataatgtc-tca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1074281 169 + 81552678 tgtacatcttgaatttggaaactgagtgccagcttgtttctccagaaagg--tgcccatctgtatttccaccagtggtgaatgggcgagtccttcatttccagcttccttattggagcca-ccattattgcatcttt-agtcactcgcaatatgggaaaagataatgtcttca i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1404450 168 + 108979918 Tgtacaccttgaatttggaaacttagtgccagcttgttgctccagaatgg--tgcccatccgcatttccactagtgatgaatgagcgagtcattcacttccggcatcctcactggagcca-ccatgattgcgtcttt-agtcactcgcaatatgggaaaatataatgtc-tca i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1376853 168 - 111193037 tgtacaccttgaatttggaaacttagtgccagcttgttgctccagaatgg--tgcccatccgcatttccactagtgatgaatgagcgagtcattcgcttccggcatcctcactggagcca-ccatgattgcgtcttt-agtcactcgcaatatgggaaaatataatgtc-tca i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1405297 168 + 3644372 TGTACACCTTGAATTTGGAAACTTAGTGCCAGCTTGTTGCTCCAGAATGG--TGCCCATCCGCATTTCCACTAGTGATGAATGAGCGAGTCATTCACTTCCGGCATCCTCACTGGAGCCA-CCATGATTGCGTCTTT-AGTCACTCGCAATATGGGAAAATATAATGTC-TCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1359020 168 - 10304083 tgtacatcttgaatttggaaacttagtgccagcttgtttctccagaaagg--tatccatccgcatttccactagtgatgaatgagtgagtcattcacttccggcatcctcactggagcca-ccatgattgcgtcttt-agtcactcgtaatatgggaaaagataatgtc-tca i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1433634 168 - 107702431 tgtacatcttgaatttggaaacttagtgccagcttgtttctccagaatgg--tgcccatctgcatttccactagtgataaatgagtgagtcattcacttccggcatcctcactggagcca-ccatgattgcgtcgtt-agtcactcgtaatatgggaaaagataatgtc-tca i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 907467 168 - 2200435 TGTACGTCTTGAATTTGGCAACTTAGTGCCAGCTTGTTTCTCCAGAAAGA--TATCCATCCTCATTTCCACTAGTGATGAATGAGCGAGTCATTCACTTCCGGCATCCTCACTGGAGCCA-CCATGATTGCGTCTTT-AGTCACTTGCAATATGGGAAAAGATAATGTC-TCA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1350046 167 - 108792865 cgtgcatcttgagtttggaaacgtagtgccagatggtttctccagaaagg--ggccaatctgcgttcccaccagcggcgaacgagcgagtgcttcatttccgccatcctcactggagcca-cc-ttactgcatttct-agtcattcacaatatgggaaaagacagtgtc-tca i calJac3.chr14 I 71 C 0 s saiBol1.JH378218 1200565 164 - 7082604 CGTGCATCTTGAGtttggaaacctagtgccaggctgtttctccagagagg--tgccagtctgcgttcccagcagcggcgactgagcg-gtgcttcatttccgccatcctcactggagcca-cc-tcactgcatctct-agtccttcacgatatgggaaaag--agtgtc-tcg i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 80569 166 + 287728 CGTGCATCTTGAGtttggaaacctagtgccaggtcgtttctccaga-agg--tgccaatctgcgttcccaccagcggcgaacgagcgaaagcttcatttctgccatcctcactggagcca-cc-tcattgcgtttct-agtcattcacaatgtgggaaaagacagtgtc-tca i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1662214 167 + 4416731 tgcacatcttaaatttagaaaacta-tgccagggtgcttctccagaaaagtttatcaatttacatttctaccaataatctatgaatgggtgcat--tttcctacatctccactaagactagccattattgtgctttcgaatcattctcaatat--gaacagaacatatc-tgt i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89984948 562 - 120129022 I e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 919940 8 + 5252280 I e colAng1.NW_012118821v1 1342136 691 - 13651311 M a score=201128.000000 s hg38.chr2_KI270774v1_alt 86223 25 + 223625 ttgata-cttaacctgcgtttcctgt s panTro5.chr2A 1363818 25 + 111504155 ttgata-cttaacctgcgtttcctgt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1323919 25 + 114371477 ttgata-cttaacctgggtttcctgt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1348810 25 + 1464242 ctgata-cttaacctgcgtttcctgt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1074450 25 + 81552678 ttgata-cttaacctgcgtttcctgt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1404618 25 + 108979918 ttgaca-cttaacctgcgtttcctgt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1377021 25 - 111193037 ttgaca-cttaacctgcgtttcctgt i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1405465 25 + 3644372 TTGACA-CTTAACCTGCGTTTCCTAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1359188 25 - 10304083 ttgaca-cttaacctgcgtttcctgt i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1433802 25 - 107702431 ttgata-cttaacctgcgtttcctgt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 907635 25 - 2200435 TTGACA-CTTAACCTGCGTTTCCTGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1342835 25 - 13651311 TTGATA-CTTCACCTGTGTTTCCTGT i colAng1.NW_012118821v1 M 691 C 0 s calJac3.chr14 1350213 26 - 108792865 ctgacagcttaacctgcctttcctat i calJac3.chr14 C 0 I 3 s saiBol1.JH378218 1200729 26 - 7082604 ccgatagcttcacctgcctttcctgt i saiBol1.JH378218 C 0 I 3 s aotNan1.NW_018513311v1 80735 26 + 287728 ctgatagcctaacctgcctttcctgt i aotNan1.NW_018513311v1 C 0 I 20 s dasNov3.JH576208 1662381 22 + 4416731 ----tagtttaatttacatttacagt i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89984948 562 - 120129022 I e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 919940 8 + 5252280 I a score=51376.000000 s hg38.chr2_KI270774v1_alt 86248 9 + 223625 atcactatg------ s panTro5.chr2A 1363843 9 + 111504155 atcactaTG------ i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1323944 9 + 114371477 atcactatg------ i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1348835 9 + 1464242 atcactaTG------ i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1074475 9 + 81552678 atcactatg------ i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1404643 9 + 108979918 atcactatg------ i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1377046 9 - 111193037 atcactatg------ i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1405490 9 + 3644372 ATCACTATG------ i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1359213 9 - 10304083 atcactaTG------ i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1433827 9 - 107702431 atcactatg------ i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 907660 9 - 2200435 ATCACTATG------ i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1342860 9 - 13651311 ATCGCTATG------ i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1350242 9 - 108792865 actaatagg------ i calJac3.chr14 I 3 I 7 s saiBol1.JH378218 1200758 9 - 7082604 gctagtaag------ i saiBol1.JH378218 I 3 I 7 s dasNov3.JH576208 1662403 15 + 4416731 gttactagtaaattt i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 80761 20 + 287728 I e mm10.chr12 89984948 562 - 120129022 I e cebCap1.NW_016107827v1 1288267 580 + 1864846 I e otoGar3.GL873658 919940 8 + 5252280 I a score=2382473.000000 s hg38.chr2_KI270774v1_alt 86257 255 + 223625 tt--tttagaaagatatatttgc-attttt--tcctttgttttatgaattgcctgctcatgacctaagcc--ctttttttaagtggtgt--att----TAAGTGACTACCTTTACTT-----TGTGTTTCTCTG--TAA-CCCGCAGATGGACTGCCCAGCTCCATTCTTCT----GGGGTGTGTGGGAGCTTGTC-CG---------GGGTGCAGGGCAAGGCAATGTGAGAGCCA-----GCGGGGGCTCCGCTG-GACACAGGCCATGCC-CGGGCAGCCTGGCGATGCTTGGG s panTro5.chr2A 1363852 255 + 111504155 TT--TTTAGAAAGATATATTTGC-ATTTTT--TCCTTTGTTTTATGAATTGCTTGCTCATGACCTAAGCC--CTTTTTTTAAGTGGTGT--ATT----TAAGTGACTACCTTTACTT-----TGTATTTCTCTG--TAA-CCCGCAGATGGACTGCCCAGCTCCATTCTTCC----GAGGTGTGTGGGAGCTTGTC-CG---------GGGTGCAGGGCAAGGCAATGTGAGAGCCA-----GCGGGGGCTCTGCTG-GACACAGGCCATGCC-CGGGCAGCCTGGTGATGCTTGGG i panTro5.chr2A C 0 I 4 s panPan2.chr2A 1323953 255 + 114371477 tt--tttagagagatatatttgc-attttt--tcctttgttttatgaattgcctgctcatgacctacgcc--ctttttttaagtggtgt--ATT----TAAGTGACTACCTTTACTT-----TGTGTTTCTCTG--TAA-CCCGCAGATGGACTGCCCAGCTCCATTCTTCC----GGGGTGTGTGGGAGCTTGTC-CG---------GGGCGCAGGGCAAGGCAATGTGAGAGCCA-----GCGGGGGCTCCGCTG-GACACAGGACATGCC-CGGGCAGCCTGGCGATGCTGGGG i panPan2.chr2A C 0 I 3 s gorGor5.CYUI01015607v1 1348844 255 + 1464242 TT--TTTAGAAAGATATATTTGC-ATTTTT--TCCTTTGTTTTATGAATTGCCTGCTCATGACCTAAGCC--CTTTTTTTAAGTGGTGT--ATT----TAAGTGACTACCTTTACTT-----TGTGTTCCTCTG--TAA-CCCACAGATGGACTGCCCAGCTCCATTCTTCC----GGGGTGTGCGGGAGCTTGTC-TG---------GGGTGCAGGACAGGGCAATGTGAGAGCCA-----GCGGGGGCTCTGCTG-GACACAGGCCATGCC-CAGGCAGCCTGGCGATGCTTGGG i gorGor5.CYUI01015607v1 C 0 I 4 s nomLeu3.chr19 1074484 264 + 81552678 tt--tttagaaagatatatttgc-attttt--TCCTTTGTTTTATGAATTGCCTGCTCATGACTTACGCC--CTTTTTTTAAGTGGTAT--ATT----TAAGTGACTACCTTTACTT-----TGTGTTTCTCTG--TAA-CCCACCGATGGACTGCCCAGCTCCATTCTTCG----GGGCTGTGCGGGACCCTGTC-CAAAAGTGCCTGGGTGCAGGGCAGGGCAATGTGAGAGCCA-----GCGGGGGCTCTGCTG-GACACAGGCCATGCC-CGGGCAGCCTGGCGATGCTTGGG i nomLeu3.chr19 C 0 I 4 s rheMac8.chr13 1404652 264 + 108979918 tt--tttagaaagatatacttct-gttttt--tcctttgttttatgaattgcctgctcatgacctatgcc--ctttttttaagtggtgt--ATT----TAAGTGCCTACCTTTACTT-----TGTGTTTCTCTG--TAA-CCCACAGATGGACTGCTCAGCTCCGTTCTCCC----AGGGTGTGCGGGAGCTTGTC-CGAAAGTGCCTGGGTGCAGGGCAGGGCAATGTGAGAGCCA-----GCGGGGGCTCTGCTC-GACACAGGCCATGCC-CGGACTGCCTGGCGATGCTTGGG i rheMac8.chr13 C 0 I 4 s macFas5.chr13 1377055 264 - 111193037 tt--tttagaaagatatacttct-gttttt--tcctttgttttatgaattgcctgctcatgacctatgcc--ctttttttaagtggTGT--ATT----TAAGTGCCTACCTTTACTT-----TGTGTTTCTCTG--TAA-CCCACAGATGGACTGCCCGGCTCCGTTCTCCC----AGGGTGTGCGGGAGCTTGTC-CGAAAGTGCCTGGGTGCAGGGCAGGGCAATGTGAGAGCCA-----GCGGGGGCTCTGCTC-GACACAGGCCATGCC-CGGACTGCCTGGCGATGCTTGGG i macFas5.chr13 C 0 I 4 s macNem1.NW_012011978v1 1405499 264 + 3644372 TT--TTTAGAAAGATATACTTCT-GTTTTT--TCCTTTGTTTTATGAATTGCCTGCTCATGACCTATGCC--CTTTTTTTAAGTGGTGT--ATT----TAAGAGCCTACCTTTACTT-----TGTGTTTCTCTG--TAA-CCCACAGATGGACTGCCCAGCTCCGTTCTCCC----AGGGTGTGTGGGAGCTTGTC-CGAAAGTGCCTGGGTGCAGGGCAGGGCAATGTGAGAGCCA-----GCGGGGGCTCTGCTC-GACACAGGCCATGCC-CGGACTGCCTGGCGATGCTTGGG i macNem1.NW_012011978v1 C 0 I 4 s cerAty1.NW_012000820v1 1359222 262 - 10304083 TT--TTTAGAAAGATATA--TTT-GTTTTT--TCCTTTGTTTTATGAATTTTCTGCTCATGACCTATGCC--CTTTTTTTAAGTGGTGT--ATT----TAAGTGCCTACCTTTACTT-----TGTGTTTCTCTG--TAA-CCCACAGAGGGACTGCCCAGCTCCATTCTCCC----GGGGTGTGCGGGAGCTTGTC-CGAAAGTGCCTGGGTGCAGGGCAGGGCAATGTGAGAGCCA-----GCGGGGGCTCTGCTC-GACACAGGCCATGCC-CGGACTGCCTGGCAATGCTTGGG i cerAty1.NW_012000820v1 C 0 I 4 s chlSab2.chr14 1433836 258 - 107702431 tt--tttagaaagatata--ttt-gttttt--tcctttgttttatgaattgtctgctcatgacctatgcc--ctttttttaagtggtgt--att----TAAGTGCCTACCTTTACTT-----TGTGTTTCTCTG--TAACCCCACAGATGGACTGCCCAGTTCCATTCTCCC----GGGGTGTGCGGGAGCTTGTC-CGAAAGTGCCTGGGT-----GCAGGGCAATGTGAGAGCCA-----GCGGGGGCTCTGCTT-GACACAGGCCATGCC-CGGACTGCCTGGCGATGCTTGGG i chlSab2.chr14 C 0 I 4 s manLeu1.NW_012103754v1 907669 263 - 2200435 TT--TTTAGAAAGATATA--TTT-GTTTTT--TCCTTTGTTTTATGAATTTTCTGCTCATGACCTATGCC--CTTTTTTTAAGTGGTGT--ATT----TAAGTGCCTACCTTTACTT-----TGTGTTTCTCTG--TAACCCCACAGATGAACTGCCCAGCTCCATTCTCCC----GGGGTGTGCGGGAGCTTGTC-CGAAAGTGCCTGGGTGCAGGGCAGGGCAATGTGAGAGCCA-----GCGGGGGCTCTGCTC-GACACAGGCCATGCC-CGGACTGCCTGGCGATGCTTGGG i manLeu1.NW_012103754v1 C 0 I 4 s colAng1.NW_012118821v1 1342869 262 - 13651311 TT--TTTAGAAAGATATA--TTT-GTTTTT--TCCTTTGTTTTATGAATTACCTGCTCATGACCTATGCC--CTTTTTTTAAGTGGTGT--ATT----TAAGTGCCTACCTTTACTT-----GGTGTTTCTCTG--TAA-CCCACAGATGGGCTGCCCAGCTCCATTCTTCC----AGGGTGTGCGGGATCTTGCC-CGAAAGTGCCTGGGTGCAGGGCAGGGCCATGTGAGAGCCA-----GCAGGGGCTCTGCTT-GACACAGGCCATGCC-CAGACTGCCTGGCAATGCTTGGG i colAng1.NW_012118821v1 C 0 I 4 s calJac3.chr14 1350258 259 - 108792865 tt--tttaggaagacatatttgc-tttttt--ttctttgttttatgaatcacctactcatgacttatgcc--cttttt--AAGGGGTGT--ATT----TTAGTGTCTGCCTGTACTG-----TGTGTTCCTCTG--TAA-CC--CAGAGGGACTGCCCAGCTCCATTCTTCT----GAGGTGAGCAGGAGCTTGTT-TGAAAATGCCTGGGTGCAGGGCAGGGCACTGTG-GCACCA-----GTGGGGGCTGTGCTT-CACACCAGCCATGCC-CGGGCAGCCTGGCGATGCTTGGG i calJac3.chr14 I 7 I 14 s saiBol1.JH378218 1200774 261 - 7082604 ttactttaggaagacatatttgc-tttttt--ttctttcttttatgaattgtctgctcatgacctatgcc--cttttt-aaaggggtgt--ATT----TAAGTGTCTGCCTGTACTT-----TGTGATCCTCTG--TAA-CCCACAGAGGGACTGCCCAGCTCCA---TTCT----GTGGTGATCAGGAGCTTGTT-CGAAAGTGCCTGGGTGCAGGGCAGGGCACTGTG-GCCCCA-----GTGGGGGCTCCGCTT-CACACCAGCCATGCC-CAGGCAGCCTGGCAATGTGTGGG i saiBol1.JH378218 I 7 I 4 s cebCap1.NW_016107827v1 1288847 263 + 1864846 tt--tttaggaagacatatttgcttttttt--ttctttgttttatgaattatctgctcatgacctatgcc--cttttt-acggggatgt--att----taagtgtctgtctttACTT-----TGTGCTCCTCTG--TAA-CCCACAGAAGGACTGCTCAGCTCCATTCTTCC----GGGGTGAGCAGGAGCTTGTT-CGAAAGCGCCTGGGTGCAGGGCAGGGCACTGTG-GCACCA-----GCGGGGGCTCTGCTT-CACACCAGCCATACC-CGGGCAGCCCGGCGATGCGTGGG i cebCap1.NW_016107827v1 I 580 C 0 s aotNan1.NW_018513311v1 80781 262 + 287728 tt--tttaggaagacatatttgc-tttttt--ttctttgtttcatgaattgtctgctcatgacctgtgcc--cttttt-aaaggggtgt--ATT----TAAGTGTCTGCCTTTACTT-----TGTGTCCCTCTG--TAA-CCCACAGAGGGACTGCCCAGCTCCATTCTTCC----AGGGTGAGCAGGAGCTTGTT-CGAAAGTGCCTGGGTGCAGGGCAGGGCGCTGTG-GCACCA-----GTGGGGGCTCTGCTT-CACACCAGCCATGCC-CGGGCAGCCTGGCGATGCTTGGG i aotNan1.NW_018513311v1 I 20 I 14 s dasNov3.JH576208 1662418 286 + 4416731 tt--tttaggaaagttttttgac-attttttatcatttctctaatgaattgcccactcgtgactttggccttcttttttaaattggtgttgattttcctaagtgtttgtatttatttatttattttTTTCCCTACCTAA-ATCTCAAAT-------TCAGCTTCATTCTCCCACCAGATTTGGGGGGAAGGTTGTCTTGAAAGTATATAAGAACAtggcaaactgaaaataacaccagacatgaagaggaagtgcttggattctggtcatgcctcaagcagtctgagtgactttggg i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89984948 562 - 120129022 I e otoGar3.GL873658 919940 8 + 5252280 I a score=10424.000000 s hg38.chr2_KI270774v1_alt 86512 1 + 223625 T s panTro5.chr2A 1364111 1 + 111504155 T i panTro5.chr2A I 4 C 0 s panPan2.chr2A 1324211 1 + 114371477 T i panPan2.chr2A I 3 C 0 s gorGor5.CYUI01015607v1 1349103 1 + 1464242 T i gorGor5.CYUI01015607v1 I 4 C 0 s nomLeu3.chr19 1074752 1 + 81552678 T i nomLeu3.chr19 I 4 C 0 s rheMac8.chr13 1404920 1 + 108979918 T i rheMac8.chr13 I 4 C 0 s macFas5.chr13 1377323 1 - 111193037 T i macFas5.chr13 I 4 C 0 s macNem1.NW_012011978v1 1405767 1 + 3644372 T i macNem1.NW_012011978v1 I 4 C 0 s cerAty1.NW_012000820v1 1359488 1 - 10304083 T i cerAty1.NW_012000820v1 I 4 C 0 s chlSab2.chr14 1434098 1 - 107702431 T i chlSab2.chr14 I 4 C 0 s manLeu1.NW_012103754v1 907936 1 - 2200435 T i manLeu1.NW_012103754v1 I 4 C 0 s colAng1.NW_012118821v1 1343135 1 - 13651311 T i colAng1.NW_012118821v1 I 4 C 0 s calJac3.chr14 107439419 1 + 108792865 T i calJac3.chr14 n 14 C 0 s saiBol1.JH378218 1201039 1 - 7082604 T i saiBol1.JH378218 I 4 C 0 s cebCap1.NW_016107827v1 1289110 1 + 1864846 T i cebCap1.NW_016107827v1 C 0 I 13 s aotNan1.NW_018513311v1 203733 1 - 287728 T i aotNan1.NW_018513311v1 n 14 C 0 s dasNov3.JH576208 1662704 1 + 4416731 c i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89984948 562 - 120129022 I e otoGar3.GL873658 919940 8 + 5252280 I a score=50327.000000 s hg38.chr2_KI270774v1_alt 86513 5 + 223625 ---------CAGTC s panTro5.chr2A 1364112 5 + 111504155 ---------CAGTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1324212 5 + 114371477 ---------CAGTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1349104 5 + 1464242 ---------CAGTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1074753 5 + 81552678 ---------CAGTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1404921 5 + 108979918 ---------TAGTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1377324 5 - 111193037 ---------TAGTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1405768 5 + 3644372 ---------CAGTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1359489 5 - 10304083 ---------CAGTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1434099 5 - 107702431 ---------CAGTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 907937 5 - 2200435 ---------CAGTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1343136 5 - 13651311 ---------CAGTC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 107439420 5 + 108792865 ---------CAGTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1201040 5 - 7082604 ---------CAGTC i saiBol1.JH378218 C 0 I 4 s cebCap1.NW_016107827v1 573197 5 - 1864846 ---------CAGTC i cebCap1.NW_016107827v1 n 13 C 0 s aotNan1.NW_018513311v1 203734 5 - 287728 ---------CAGTC i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1662705 14 + 4416731 aaagatttatgttc i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89984948 562 - 120129022 I e otoGar3.GL873658 919940 8 + 5252280 I a score=1695466.000000 s hg38.chr2_KI270774v1_alt 86518 164 + 223625 CCCTTGTCCCA-----------CTGGAGGCCCAGATGGACACCACTTGCTCTCCCTCCTCCTACCATCGTGAGATAGAATGAAATTAAAGGTACTGCAGCAGCTCT----GGGCTCTCC---------------GTG-GTTCAGCTGTGAGGACACAGTGGGGCCACAGCACAGCCCTCCTCAGCAGTGGTACCT s panTro5.chr2A 1364117 164 + 111504155 CCCTTGTCCCA-----------CTGGAGGCCCAGATGGACACCACTTACTCTCCCTCCTCCTACCATCGTGAGACAGAATGAAATTAAAGGTACTGCAGCAGCTCT----GGGCTCTCC---------------GTG-GTTCAGCTGTGAGGACACAGTGGGGCCACAGCACAGCCCTCCTCAGCAGTGGTACCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1324217 164 + 114371477 CCCTTGTCCCA-----------CTGGAGGCCCAGATGGACACCACTTGCTCTCCCTCCTCCTACCATCGTGAGACAGAATGAAATTAAAGGTACTGCAGCAGCTCT----GGGCTCTCC---------------GTG-GTTCAGCTGTGAGGACACAGTGGGGCCACAGCACAGCCCTCCTCAGCAGTGGTACCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1349109 164 + 1464242 CCCTTGTCCCA-----------CTGGAGGCCCAGATGGACACCACTTGCTCTCCCTCCTCCTACCATCGTGAGACAGAATGAAATTAAAGGTACTGCAGCAGCTCT----GGGCTCTCC---------------GTG-GTTCAGCTGTGAGGACACAGTGGGGCCACAGCACAGCCCTCCTCAGCAGTGGTACCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1074758 164 + 81552678 GCCTTGTCCCA-----------CTGGAGGTCCAGGTGGACACCACCTGCTCTCCCGCCTCCCACCATCATGAGACAGAATGAAATTAAAGGTACCACAGCAGCTCT----GGGGTCTCC---------------ATG-GTTCAGCTGTGAGGACACAGTGGGGCCACAGCACAGACTTCCTCAGCAGTGGTACCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1404926 164 + 108979918 CCCTTGTCCCA-----------CTGGAGGTCCAGATGGACACCACCTGCTCTCCCTCTTCCCACCACTGTGAGACAGAATGAAATTAAAGGTACTGCAGCAGCTCT----GGGCTCTCC---------------GTG-GTTCAGCTGTGAGGACACAGTGGGGCCACAGCACAGCCCTCTTCAGCAGTGGTACCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1377329 164 - 111193037 CCCTTGTCCCA-----------CTGGAGGTCCAGATGGACACCACCTGCTCTCCCTCTTCCCACCACTGTGAGACAGAATGAAATTAAAGGTACTGCAGCAGCTCT----GGGCTCTCC---------------GTG-GTTCAGCTGTGAGGACACAGTGGGGCCACAGCACAGCCCTCTTCAGCAGTGGTACCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1405773 149 + 3644372 CCCTTGTCCCA-----------CTGGAGGTCCAGATGGACACCACCTGCTCTCCCTCTTCCCACCACTGTGAGACAGAATGAAATTAAAGGTACTGCAGCAGCTCT----GGGCTCTCC---------------GTG-GTTCAGCTGTGAGGACACAGTGGGGCCACAGCACAGCCCTCT--------------- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1359494 164 - 10304083 CCCTTGTCCCA-----------CTGGAGGTTCAGATGGACACCACCTGCTCTCCCTCCTCCCACCACTGTGAGAGAGAATGAAATTAAAAGTACTGCAGCAGCTCT----GGGCTCTCC---------------GTG-GTTCAGCTGTGAGGACACAGTGGGGCCACAGCACAGCCCTCTTCAGCAGTGGTACCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1434104 164 - 107702431 CCTTTGTCCCA-----------CTGGAGGTCCAGATGGACACCACCTGCTCTCCCTCTTCCCACCACTGTGAGACAGAATGAAATTAAAGGTACTGCAGCAGCTCT----GGGCTCTCC---------------GTG-GTTCAGCTGTGAGGACACAGTGGGGCCACAGCACAGCCCTCTTCAGCAGTGGTACCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 907942 164 - 2200435 CCCTTGTCCCA-----------CTGGAGGTCCAGATGGACACCACCTGCTCTCCCTCTTCCCACCACTGTGAGACAGAATGAAATTAAAGGTACTGCAGCAGCTCT----GGGCTCTCC---------------GTG-GTTCAGCTGTGAGGACACAGCGGGGCCACAGCACAGCCCTCTTCAGCAGTGGTACCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1343141 164 - 13651311 CCCTTGTCCCA-----------CTGGAGGTCCAGATGGACACCACCTGCTCTCCCTCCTCCCACCACTGTGAGACAGAATGAAATTAAAGATACTGCAGCAGCTCT----GGGCTCTCC---------------ATG-GTTCAGCTGTGAGGGCACAGTGGGGCCACAGCACAGCCCTCTTCAGCAGTGGTACCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 107439425 163 + 108792865 -CCTTGTTCCA-----------CTAGAGGCCCAGATGGATACCACCTGCTCTCCCTCCTCCCACCATTGTGAGACAGGATTAAATTAAAGGTACTGCAGCAGCTCT----GGGCTCTCC---------------GTG-GCTCAGCTGTGAGGACACAGTGGAGCCACAGCACAGTCCTCCTCAGCAGTGGCACCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 5879155 164 + 7082604 CCCTTGTTCCA-----------CTAGAGGCCCAGATGGGCACCACCTGCTCTCCCTCCTCCCACCATTGTGAGACAGAAGTAAATTAAAGGTACTGCAGCAGCTCT----GGGCTCTCC---------------GTG-GCTCAGCTGTGAGGACACAGTGGAGCCACGGCACAGCCCTCCTCAGCAGTGGCACCT i saiBol1.JH378218 n 4 C 0 s cebCap1.NW_016107827v1 573202 164 - 1864846 ACCTTGTTCCA-----------CTAGAGGCCCAGATAGACACCACCTGCTCTCCCTCCTCCCACCATTCTGAGACAGAATTAAATTAAAGGTACTTCAGCAGCTCT----GGGATCTCC---------------GTG-GCTCAACTGTGAGGACATAGTGGAGCCACAACACAGCCCTCCTCAGCAGTGGCACCT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 203739 164 - 287728 CCCTTGATCCA-----------CTAGAGGCCCAGATGGACACCACCTGCTCTCGCTCCTCCCACCATTGTGAGACAGACTTAAATTAAAGGTACTGCAGCAGCTCT----GGGCTCCCC---------------GTG-GCTCAGCTGTGAGGACACAGTGGAGCCACGGCACAGCCGTCCTCAGCAGTGGTACCT i aotNan1.NW_018513311v1 C 0 n 0 s dasNov3.JH576208 1662719 175 + 4416731 tctccatctcagttattatcacctggagattgaggtgaataaaatccgcacagcctcctcccgcagtcatgaga----actaaattaaataCA---CAGCAGTTTTCCACGGGCTCGTCCCCACCCACTCACGGGTGTGATCAGGGGTGAGGATAGAGTGGGG-TGCAGCTCA-CACTCATCAG----------- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89984948 562 - 120129022 I e otoGar3.GL873658 919940 8 + 5252280 I a score=39668.000000 s hg38.chr2_KI270774v1_alt 86682 6 + 223625 CCATAG s panTro5.chr2A 1364281 6 + 111504155 CCATAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1324381 6 + 114371477 CCATAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1349273 6 + 1464242 CCATAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1074922 6 + 81552678 CCACAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1405090 6 + 108979918 CCTCAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1377493 6 - 111193037 CCTCAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1405922 4 + 3644372 --TCAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1359658 6 - 10304083 CCTCAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1434268 6 - 107702431 CCTCAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 908106 6 - 2200435 CCTCAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1343305 6 - 13651311 CCTCAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 107439588 6 + 108792865 CCACAG i calJac3.chr14 C 0 n 0 s saiBol1.JH378218 5879319 6 + 7082604 CCACAG i saiBol1.JH378218 C 0 n 0 s cebCap1.NW_016107827v1 573366 6 - 1864846 CCACAG i cebCap1.NW_016107827v1 C 0 n 0 e aotNan1.NW_018513311v1 203903 0 - 287728 I e mm10.chr12 89984948 562 - 120129022 I e otoGar3.GL873658 919940 8 + 5252280 I e dasNov3.JH576208 1662894 0 + 4416731 C a score=3095971.000000 s hg38.chr2_KI270774v1_alt 86688 351 + 223625 CAGTGGTGCCTGCTGTGTCTCAGAATTGTTG---CAGGAGGCT--GTGCTCACAA-----AAATGC--CATGCACCGTGG------GTGGGGGACACTGGGGAACAATGG-GCTGGTGACCCTCAGAGT--TCTTTGGAACTACCTGTGGCTGCAGCTGCCCCCTTA-CCATGTGAACTTCAGGACGCTTCTCTGTC-AAGCAAGGCTCTTAGAAGAACGTGGTCCCGTGACAGTCCCGAGAGCGGCTCACAGATGGCTCCATCTCCCTCCTTCCGAGCACACCGTGGGTTCACATTTCACTGT-----------------GGTGTGACCACCTGGCATGCTTTAG-------------TGGGAGTG----GTGTGACC--------------------AGAGCACGCCGGGCCCCACCAAATCTCC--C s panTro5.chr2A 1364287 353 + 111504155 CAGTGGTACCTGCTGTGTCTCAGGATTGTGG---CAGGTGTCT--GTGCCCACAA-----AAATGCCACACACACACTGG------GTGGGGGACACTGGGGAACAAAGG-GCTGGTGACCCTCAGAGT--TCTTTGGAACTGCCTGTGGCCGCAGCTGCCCCCTTA-CCGTGTGAACTTCAGGATGCTTCTCTGTA-AAGCAAGGCTCTTAGAAGAACATGGTCCCATGACAGTCGCGAGAGCGGCTCACAGATGGCTCCATCTCCCTCCTTCCGAGCACACCGTGGGTTCACATTTCACTGT-----------------GGTGTGACCACCTGGCATGCTTTAG-------------TGGGAGTG----GTGTGACC--------------------AGAGCACGGTGGGCCCCACCAAATCTCC--C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1324387 351 + 114371477 CAGTGGTACCTGCTGTGTCTCAGGATTGTGG---CAGGTGGCT--GTGCCCACAA-----AAATGC--CACACACAGTGG------GTGGGGGACACTGGGGAACAATGG-GCTGGTGACCCTCAGAGT--TCTTTGGAACTACCTGTGGCTGCAGCTGCCCCCTTA-CCAGGTGAACTTCAGGACGCTTCTCTGTC-AAGCAAGGCTCTTAGAAGAACGTGGTCCCGTGACAGTCCCAAGAGCGGCTCACAGATGGCTCCATCTCCCTCCTTCTGAGCACACCGTGGGTTCACATTTCACTGT-----------------GGTGTGACCACCTGGCATGCTTTAG-------------TGGGAGTG----GTGTGACC--------------------AGAGCACGCCGGGCCCCACCAAATCTCC--C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1349279 351 + 1464242 CAGTGGTACCTGCTGTGTCTCAGGATTGTGG---CAGGTGGCT--GTGCCCAGAA-----AAATGC--CACACACACTGG------GTGGGGGACACTGGGGAACAATGG-GCTGGTGACCCTCAGAGT--TCTTTGGAACTACCTGTGGCCGCAGCTGCCCCCTTA-CCATGTGAACTTCAGGATGCTTCTCTGTC-AAGTAAGGCTCTTAGAAGAACATGGTCCCGTGATAGTCCCGAGAGCTGCTCACAGATGGCTCCATCTCCCTCCTTCCGAGCACACCGTGGGTTCACATTTCACTGT-----------------GGTGTGACCACCTGGCATGCTTTAG-------------TGGGAGTG----GTGTGACC--------------------AGAGCACGCCGGGCCCCACCAAATCTCC--C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1074928 351 + 81552678 CAGTGGTATCTGCCCTGTCACAGGATTGTGG---CAGGTGGCT--GTGCCCACAA-----AAATGC--CACACAAACTGG------GTGGGGGACACTGGGGAACAATGG-GCTGGTGACCCTCAGAGT--TCTTTGGAACTACCCGTGGCTGCAGCTGCCCCCTTA-CCATGTGAACTTCAGGATGCTTCTCTGTC-AAGCAAGGCTCTTAGAAGGACATGGTCCCATGATAGTCCCGAGAGCTGCTCACAGATGGCTCCATCTCCCTCCTTCCGAGCACACCGTGGGTTCACATTTCACTGT-----------------GGTGTGACCACCTGGCATGCTTTAG-------------TGGGAGTG----GTGTGGCC--------------------AGAGCACGCTGGGCCCCACCCAATCTCC--C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1405096 353 + 108979918 CAGTGGTACCTGCTGTGTCTCAGGATTGCGG---CAGGTGGCT--GTGCCCACAA-----AAATGC--CACACACACTGG------GTGGGGGACGCTGGGGAACAATGG-GCTGGTGACCCTCAGAGTCACCACAGGAACTACTTGTGGCTGCAGCTGCCCCTTTA-CCATGTGAATATCAGGATGCTTCTCTGTC-AGGCAAGGCTCTTAGAAGGACATGGTCCCGTGATAGTCCCGAGAGCTGCTTACAGATGGTTCCATCTCCCTCCTTCCGAGCATGCCGTGGGTTCACGTTTCACTGT-----------------GGTGTGACCACCTGGCATGCTTCAG-------------TGGGAGTG----GTGTGGCC--------------------ACAGCATGTCGGGCCGCACTCAGTCTCC--C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1377499 353 - 111193037 CAGTGGTACCTGCTGTGTCTCAGGATTGCGG---CAGGTGGCT--GTGCCCACAA-----AAATGC--CACACACACTGG------GTGGGGGACGCTGGGGAACAATGG-GCTGGTGACCCTCAGAGTCACCACAGGAACTACTTGTGGCTGCAGCTGCCCCTTTA-CCATGTGAATATCAGGATGCTTCTCTGTC-AGGCAAGGCTCTTAGAAGGACATGGTCCCGTGATAGTCCCGAGAGCTGCTTACAGATGGTTCCATCTCCCTCCTTCCGAGCATGCCGTGGGTTCACGTTTCACTGT-----------------GGTGTGACCACCTGGCATGCTTCAG-------------TGGGAGTG----GTGTGGCC--------------------ACAGCATGTCGGGCCGCACTCAGTCTCC--C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1405926 353 + 3644372 CAGTGGTACCTGCTGTGTCTCAGGATTGCGG---CAGGTGGCT--GTGCCCACAA-----AAATGC--CACACACACTGG------GTGGGGGACGCTGGGGAACAATGG-GCTGGTGACCCTCAGAGTCACCACAGGAACTACTTGTGGCTGCAGCTGCCCCTTTA-CCATGTGGATATCAGGATGCTTCTCTGTC-AGGCAAGGCTCTTAGAAGGACATGGTCCTGTGATAGTCCCGAGAGCTGCTTACAGATGGTTCCATCTCCCTCCTTCCGAGCATGCCGTGGGTTCACGTTTCACTGT-----------------GGTGTGACCACCTGGCATGCTTCAG-------------TGGGAGTG----GTGTGGCC--------------------ACAGCATGTCGGGCCGCACTCAGTCTCC--C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1359664 353 - 10304083 CAGTGGTACCTGCTGTGTCTCAGGATTGCGG---CAGGTGGCT--GTGCCCCCAA-----AAATGC--CACACACACTGG------GTGGGGGACGCTGGGGAACAATGG-GCTGGTGACCCTCAGAGTCACCACAGGAACTACCTGTGGCTGCAGCTGCCCCTTTA-CCATGTGAATATCAGGATGCTTCTCTGTC-AGGCAAGGCTCTTAGAAGGACATGGTCCCGTGATAGTCCCGAGAGCTGCTTACAGATGGTTCCATCTCCCTCCTTCAGAGCATGCCGTGGGTTCACGTTTCACTGT-----------------GGTGTGACCACCTGGCATGCTTCAG-------------TGGGAGTG----GTGTGGCC--------------------ACAGCATGTCGGGCCGCACCCAGTCTCC--C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1434274 353 - 107702431 CAGTGGTACCTGCTGTGTCTCAGGGTTGTGG---TAGGTGGCT--GTGCCCACAA-----AAATGC--CACACACACTGG------GTGGGGGACGCTGGGGAACAATGG-GCTGGTGACCCTCAGAGTCACCACACGAACTACCTGTGGCTGCAGCTGCCCCTTTA-CCATGTGAATATCAGGATGCTTCTCTGTC-AGGCAAGGCTCTTAGAAGGACATGGTCTCGTGATAGTCCTGAGAGCTGCTTAAAGATGGTTCCATCTCCCTCCTTCCGAGCACACCGTGGGTTCACGTTTCACTGT-----------------GGTGTGACCACCTGGCATGCTTCAG-------------TGGGAGTG----GTGTGGCC--------------------ACAGCACGCCGGGCCGCACCCAATCTCC--C i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 908112 353 - 2200435 CAGTGGTACCTGCTGTGTCTCAGGATTGCGG---CAGGTGACT--GTGCCCACAA-----AAATGC--CACACACACTGG------GTGGGGGACGCTGGGGAACAATGG-GCTGGTGACCCTCAGAGTCACCACAGGAACTACCTGTGGCTGCAGCTGCCCCTTTA-CCATGTGAATATCAGGATGCTTCTCTGTT-AGGCAAGGTTCTTAGAAGGACGTGGTCTCGTGATAGTCCCGAGAGCTGCTTACAGATGGTTCCATCTCCCTCCTTCCGAGCATGCCGTGGGTTCACGTTTCACTGT-----------------GGTGTGACCACCTGGCATGCTTCAG-------------TGGGAGTG----GTGTGGCC--------------------ACAGCACGCCGGGCCGCACCCAATCTCC--C i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1343311 356 - 13651311 CAGTGGTACCTGCTGTGTCTCAGGATTGTGGGCACAGGTGGCT--GTGCCCACAA-----AAATGC--CACACACACTGG------GTGGGGGACGCTGGGGAACAATGG-GCTGGTGATCCTCAGAGTCACCACAGGAACTACCTGTGGCTGCAGCTGCCCCTTTA-CCATGTGAACATCAGGATGCTTCTCTGTC-AGGCAAGGATCTTACAAGGACATGGTCCCGTGATAGTCCCGAGAGCTGTTTACAGATGGTTCCATCTCCCTCCTTCCGAGCATGCCGTGGGTTCACGTTTCACTGT-----------------GGTGTGACCACCTGGCATGCTTCAG-------------TGGGTGTG----GTGTGGCC--------------------ACAGCACGCCGGGCCGCACCCAATCTCC--C i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1350531 305 - 108792865 CAGTGGTACCTGCTGTGCCTCAGGATTGTGG---CAGGTGGCT--ATGCCCACAA-----AAATGT--CACACAC--TGG------GTGGGAGAT---GGGGAACAGTGG-GCTGCTGACCCTCA------------GAACCAGCTGTGGCTGCAGATGCCCCCTTA-CCACGTGAACATCGGGGTGCTTCTCTGTT-CAGCAAGGCTC-TAGAAGGACATGGTTCTGTGA-----------------------------TGTCTCCCCGCTTCCCAGCACACTGTGGGTTCATGTTTCACTGT-----------------GGCACTGCCACGTGGCATATGCTAG-------------TGGGATTG----GTGTGGCC--------------------AGAGCACCTCGGGGCCCACCTAATCTCC--- i calJac3.chr14 I 14 C 0 s saiBol1.JH378218 1201049 342 - 7082604 CGGTGGTACCTGCTGAGTCTCAGGATTGTGG---CAGGTGGCT--GTGCCCACAA-----AACTGT--CACACAG--TGG------GTGGGAGAT---GGAGAACAGTGG-GCTGGTGACCCTCA-GCT--TCTCTGGAACCAGCTGTGGCTGCAGATGCCCCCTTA-CCACATGAACATCAGGATGATTCTCCATT-CAGCAAGGCTC-TAGAAGGACATGGTTCTGTGATAGCCCTGAGAGCTGCTCGCAGATGGCTCTGTCTCCCCGCTTCCCAGCACACCGT-GGTTCATGTTTCAGTGT-----------------GGCACTGCCATGTGGCATATGCTAG-------------TTGGAGTG----GCGTGGCC--------------------AGAGCATCTCAGGGCCCACCTAATCTCC--- i saiBol1.JH378218 I 4 C 0 s cebCap1.NW_016107827v1 1289124 343 + 1864846 CAGTGGTATCTGCTGTGCCTCAGGATTGTAG---CAGGTGGCT--GTGCCCACAA-----AAATGT--CACTCAC--TGG------GTGGGAGAC---GGCGAACAGTGG-GCTGGTGACGCTCAGGCT--TCTCTGGAACCAGCTGTGGCTGCAGATGCCCCCTTA-CCACATGAACATCAGGATACTTCTCTGTT-CAGCAAGGCTC-TAGAAGGACATGGTTCCATGAAAGCCCTGAGAGCTGCTTGCAGATGGCTCTGTCTCCCCG--TCCCAGCACACCGTGGGTTCACGTTTCACTGT-----------------GGCACTGCCACGTGGCATACGCCAG-------------TGGGAGTG----GCGTGGCC--------------------AGAGCACCTCGGGGCCCTCCTAATCTCCC-- i cebCap1.NW_016107827v1 I 13 I 24 s aotNan1.NW_018513311v1 81057 344 + 287728 CAGTGGTACGTGCTATGCCTCAGGATTGTGG---CAGGTGGCT--GTGCCCACAA-----AAATGT--CACACAC--TGG------GTGGGAGAC---GGGGAACAGTGG-ACTGGTGACCCTCAGACT--TCTCTGGAACAAGCTGTGGCTGCAGGTGCCCCCTTA-CCACGTGAACATCAGGATTCTTCTCTGTT-CAGCAAGGCTC-TAGAAGGACATGGTTCTGTGATAGCCCTGAGAGCTGCTTGCAGATGGCTCTGTCT-CCCGCTTCCCAGCACACCGAGGGTTCATGTTTCACTGT-----------------GGCACCGCCACGTGGTGCACGCTAG-------------TGGGAGTG----GCGTGGCC--------------------AGAGTACCTCGGGGCCCACCTAATCTCC-C- i aotNan1.NW_018513311v1 I 14 I 22 s dasNov3.JH576208 1662894 410 + 4416731 --GTGAAGCCTGTCTTATCT---------GG---GGGGTAGCTTGATGGTCGCAATCTGGAAATAG--CACACACATGGGGGTGCAGGGAGAGAAGGTTGGGAACAATGGAAATGATGATGATTCAATT--TTTTGTAAACAATGAAGTTCTGCAGCCgtcatttcagctctctgggcatcagtttccttaactgttaaaacgaggTTTTTAGAGGGAGAAAGTCTGgtgatggtcgttggagctgctgacaattatttcagtctctttccttctgagcacaatgcagggtcacatttccctgtgcatcagagtaggtacaggagtgttcgtgtgacttgtttgagaagcaaatgaaaatggtagtgatatgtgtcacctctaggtggaagctttgagaaatgcatgcttcagcacatgcagtcttc--t i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89984948 562 - 120129022 I e otoGar3.GL873658 919940 8 + 5252280 I a score=184236.000000 s hg38.chr2_KI270774v1_alt 87039 31 + 223625 CTCTG----CACGCAGTGGCAGCATGGAAACGGTG s panTro5.chr2A 1364640 31 + 111504155 CTCTG----CACACAGCGGCAGCATCAAAACGGTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1324738 31 + 114371477 CTCTG----CACGCAGTGGCAGCATGGAAACGGTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1349630 31 + 1464242 CTCTG----CACGCAGCGGCAGCATCAAAACGGTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1075279 31 + 81552678 GTCTG----CATGCAGCAGCAACATCCAAACGGTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1405449 31 + 108979918 CTCTG----GATGCAGCAGCAACATCCGAACGGTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1377852 31 - 111193037 CTCTG----GATGCAGCAGCAACATCCGAACGGTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1406279 31 + 3644372 CTCTG----GATGCAGCAGCAACATCCGAACGGTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1360017 31 - 10304083 CTCTG----GATGCAGCAGCAACATCCGAACAGTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1434627 31 - 107702431 CTCTG----GATGCAGCAGCAACATCCGAACGGTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 908465 31 - 2200435 CTCTG----GATGCAGCAGCAACATCCGAACGGTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1343667 31 - 13651311 CTCTG----GATGCAGCAGCAACATCCAAACGGTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1350836 25 - 108792865 CTCTG----TGTGCAGCAGCAACATTCAA------ i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1201391 23 - 7082604 --CTG----TGTGCAGCAGCAACATCCAA------ i saiBol1.JH378218 C 0 C 0 s dasNov3.JH576208 1663304 34 + 4416731 ctatgggatgatg-accagtgacatccaaagggtg i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 81401 22 + 287728 I e mm10.chr12 89984948 562 - 120129022 I e cebCap1.NW_016107827v1 1289467 24 + 1864846 I e otoGar3.GL873658 919940 8 + 5252280 I a score=13410.000000 s hg38.chr2_KI270774v1_alt 87070 3 + 223625 GCT- s panTro5.chr2A 1364671 3 + 111504155 GCT- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1324769 3 + 114371477 GCT- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1349661 3 + 1464242 GCT- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1075310 3 + 81552678 GCT- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1405480 3 + 108979918 GCT- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1377883 3 - 111193037 GCT- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1406310 3 + 3644372 GCT- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1360048 3 - 10304083 GCT- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1434658 3 - 107702431 GCT- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 908496 3 - 2200435 GCT- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1343698 3 - 13651311 GCT- i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1663338 3 + 4416731 -cat i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 81401 22 + 287728 I e mm10.chr12 89984948 562 - 120129022 I e saiBol1.JH378218 1201414 0 - 7082604 C e cebCap1.NW_016107827v1 1289467 24 + 1864846 I e otoGar3.GL873658 919940 8 + 5252280 I e calJac3.chr14 1350861 0 - 108792865 C a score=762093.000000 s hg38.chr2_KI270774v1_alt 87073 84 + 223625 GCCCCATCAGCCTGGGACCCTGCATGGTCAGGATGAGCACAGCCCCTTGACAAAGCT-------------------------TGGGA--TGGGGG--CCTGTCTGTTACTGCA s panTro5.chr2A 1364674 84 + 111504155 GCCTCATCAGCCTGGAACCCTGCATGGTCAGGATGAGCACAGCCCCTTGACAAAGCT-------------------------TGGGA--TGGGGG--CCTTTCTGTTACTGCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1324772 84 + 114371477 GCCCCATCAGCCTGGGACCCTGCATGGTCAGGATGAGCACAGCCCCTTGACAAAGCT-------------------------TGGGA--TGGGGG--CCTGTCTGTTACTGCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1349664 84 + 1464242 GCCCCATCAGCCTGGGACCCTGCATGGTCAGGATGAGCACAGCCCCTTGACAAAGCT-------------------------TGGGA--TGGGGT--CCTGTCTGTTACTGCG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1075313 83 + 81552678 GCCCCATCAGCCTGGGACCCTGCATGGTCAGGATGAGCACAGCCCCTTGACAAAGCT-------------------------TGGGA--TGGGGG---TTGTCTGTTACTGCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1405483 83 + 108979918 GCCCCATCAGCTGGGGACCCTGCATGGTCAGGATGAGCACAGCCCCCTGACAGAGCT-------------------------TGGAG--TGGGGT---TTGCCTGTTACTGCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1377886 83 - 111193037 GCCCCATCAGCTGGGGACCCTGCATGGTCAGGATGAGCACAGCCCCCTGACAGAGCT-------------------------TGGAG--TGGGGT---TTGCCTGTTACTGCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1406313 83 + 3644372 GCCCCATCAGCTGGGGACCCTGCATGGTCAGGATGAGCACAGCCCCCTGACAGAGCT-------------------------TGGAG--TGGGGT---TTGCCTGTTACTGCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1360051 83 - 10304083 GCCCCATCAGCTGGGGACCCTGCATGGTCAGGATGAGCACAGCCCCCTGACAGAGCT-------------------------TGGAG--TGGGGT---TTGCCTGTTACTGCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1434661 83 - 107702431 GCCCCATCAGCTGGGGACCCTGCATGGTCAGGATGAGCATAGCCCCCTGACAGAGCT-------------------------TGGAG--TGGGGT---TTGCCTGTTACTGCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 908499 83 - 2200435 GCCCCATCAGCCGGGGACCCTGCATGGTCAGGATGAGCATAGCCCCCTGACAGAGCT-------------------------TGGAG--TGGGGT---TTGCCTGTTACTGCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1343701 83 - 13651311 GCCCCATCAGCCAGGGACCCTACATGGTCAGGATGAGCACAGCCCCCTGACAGAGCT-------------------------TGGAG--TGGGGT---TTGCCTGTTACTGCA i colAng1.NW_012118821v1 C 0 I 25 s calJac3.chr14 1350861 86 - 108792865 GCCGCCGCAGCCTGGGACCCTGTGCAGTCAGGGCGAGCACAGCCCCTCGACAAAGCT-------------------------TGGAA--TGGGAGGTGGCGTCTGTTACTGCA i calJac3.chr14 C 0 I 3 s saiBol1.JH378218 1201414 85 - 7082604 GCCGCAGCAGCCTGGGACCCTGCAAGGTCGGGGTGAGCCCAGCCCCTCCACAAAGCT-------------------------TGGAA--TGGG-GGTGTTGTCTGTTACCGCA i saiBol1.JH378218 C 0 I 3 s cebCap1.NW_016107827v1 1289491 86 + 1864846 GCTGCAGCAACCTGGGACCCTGCACGGTCGGGGTGAGCACAGCCCCTCCACAGAGCT-------------------------TGGAA--TGGGGGGTGTTGTCTGTTACTGCA i cebCap1.NW_016107827v1 I 24 I 3 s aotNan1.NW_018513311v1 81423 86 + 287728 GCCGCAGCAGCCTGGCACCCTGCACGGTCAGGGTGAGCACAGTCCCTCGACAAAGCT-------------------------TGGAA--TGGGGGGTGTTGTCTGTTACTGCA i aotNan1.NW_018513311v1 I 22 I 3 s dasNov3.JH576208 1663341 110 + 4416731 gtcccatcagcctgagtctctgaatgactacaatgagcagtgcccctagccaaacctcattgtgtatgttgtttaaaacctatggaatctgaggg---ttgtcctttactgca i dasNov3.JH576208 C 0 I 3 e mm10.chr12 89984948 562 - 120129022 I e otoGar3.GL873658 919940 8 + 5252280 I a score=165328.000000 s hg38.chr2_KI270774v1_alt 87157 18 + 223625 TTAA--------CCAGCCTGCACCAA s panTro5.chr2A 1364758 18 + 111504155 TTAA--------CCAGCCTGCACCAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1324856 18 + 114371477 TTAA--------CCAGCCTGCACCAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1349748 18 + 1464242 TTAA--------CCAGCCTGCACCAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1075396 26 + 81552678 TTAACCAGCCTGCCAGCCTGCACCAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1405566 18 + 108979918 TTAA--------CCAGCCTGCACCAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1377969 18 - 111193037 TTAA--------CCAGCCTGCACCAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1406396 18 + 3644372 TTAA--------CCAGCCTGCACCAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1360134 18 - 10304083 TTAA--------CCAGCCTGCACCAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1434744 18 - 107702431 TTAA--------CCAGCCTGCACCAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 908582 18 - 2200435 TTAA--------CCAGCCTGCACCAG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1350950 18 - 108792865 TTAA--------CCAGCCTGCGCCGA i calJac3.chr14 I 3 C 0 s saiBol1.JH378218 1201502 18 - 7082604 TTAA--------CCAGCCTGTGCCGA i saiBol1.JH378218 I 3 C 0 s cebCap1.NW_016107827v1 1289580 18 + 1864846 TTAA--------CCAGCCTGCGCCGA i cebCap1.NW_016107827v1 I 3 C 0 s aotNan1.NW_018513311v1 81512 18 + 287728 TTAA--------CCAGCCTGCACCGA i aotNan1.NW_018513311v1 I 3 C 0 s dasNov3.JH576208 1663454 18 + 4416731 taaa--------ctagcctgttctaa i dasNov3.JH576208 I 3 C 0 e mm10.chr12 89984948 562 - 120129022 I e otoGar3.GL873658 919940 8 + 5252280 I e colAng1.NW_012118821v1 1343784 25 - 13651311 I a score=1626124.000000 s hg38.chr2_KI270774v1_alt 87175 178 + 223625 TTCAGAGTCTTCTCAACTTTCA--GTTTTGGATATATGCAAT-CTTGCGTGAACTT-ATGCATGGAGTGGAGAATCTAATGTACCCATA-----------GCTAT-GGATCTCCCGAGCACAGATCATGCCAAAGGTAAAACCCGTGTTGTATGTGATTCTGAAACTGGAAGTGGAG--GGGCTAAG--------------------------AGACACCAG s panTro5.chr2A 1364776 178 + 111504155 TTCAGAGTCTTCCCAACTTTCA--GTTTTGGATATATGCAAT-CTTGCGTGAACTT-ATGCATGGAGCGGAGAATCTAATCTACCCATA-----------GCTAT-GGATCTCCCGAGCACAGATCATGCCAAAGGTAAAACCTGTGTTGTATGTGATTCTGAAACTGGAAGTGGAG--GAGCTAAG--------------------------AGACACCAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1324874 178 + 114371477 TTCAGAGTCTTCTCAACTTTCA--GTTTTGGATATATGCAAT-CTTGCATGAACTT-ATGCATGGAGCGGAGAATCTAATCTACCCATA-----------GCTAT-GGATCTCCCGAACACAGATCATGCCAAAGGTAAAACCTGTGTTGTATGTGATTCTGAAACTGGAAGTGGAG--GGGCTAAG--------------------------AGACACCAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1349766 178 + 1464242 TTCAGAGTCTTCCCAACTTTCA--GTTTTGGATATATGCAAT-CTTGCGTGAACTT-ACGCATGGAGCGGAGAATCTAATCTACCCATA-----------GCTAT-GGATCTCCTGAGCACAGATCATGCCAAAGGTAAAACCTGCGTTGTATGTGATTCTGAAACTGGAAGTGGAG--GGGCTAAG--------------------------AGACACCAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1075422 178 + 81552678 TTCAGAGTCTTCCCAACTTTCA--GTTTTGGATATATGCAAT-CTTGCGTGAACTT-ATGCATGGAGGGGAGAATCTAATTTACCTATA-----------GCTAT-AGATCTCCCAAGCACAAATCATGCCAAAGGTAAAACCTGTGTTGTATGTGATTCTGAAACTGAAAGTGGAA--GGGCTGAG--------------------------AGACACCAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1405584 176 + 108979918 TTCAGAGACTTCCCAACTTCCA--GTTTTTGACATATGCAAT-CTTGCGTGAACCT-ATGCACAGAGCAGAGAATCTAATTTACCTATA-----------GCTAT-AGCTCTCCCAAGCACAAATCATGCCCAAGGTAAAACCTGTGTTGTACGTGATTCTGAAAT--GAAGTGGAG--AGGCTAAG--------------------------AGACACCAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1377987 176 - 111193037 TTCAGAGACTTCCCAACTTCCA--GTTTTTGACATATGCAAT-CTTGCGTGAACCT-ATGCACAGAGCAGAGAATCTAATTTACCTATA-----------GCTAT-AGCTCTCCCAAGCACAAATCATGCCCAAGGTAAAACCTGTGTTGTACGTGATTCTGAAAT--GAAGTGGAG--AGGCTAAG--------------------------AGACACCAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1406414 176 + 3644372 TTCAGAGACTTCCCAACTTCCA--GTTTTTGACATATGCAAT-CTTGCGTGAACCT-ATGCACAGAGCAGAGAATCTAATTTACCTATA-----------GCTAT-AGCTCTCCCAAGCACAAATCATGCCCAAGGTAAAACCTGTGTTGTACGTGATTCTGAAAT--GAAGTGGAG--AGGCTAAG--------------------------AGACACCAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1360152 175 - 10304083 TTCAGAGACTT-CCAACTTCCA--GTTTTTGATATATGCAAT-CTTGCATGAACCT-ATGCACGGAGCAGAGAATCTAATTTACCTATA-----------GCTAT-AGCTCTCCCAAGCACAAATCATGCCCAAGGTAAAACCTGTGTTGTACGTGATTCTGAAAT--GAAGTGGAG--AGGCTAAG--------------------------AGACACCAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1434762 175 - 107702431 TTCAGAGACTTCCCAACTTTCC--GTTTTTGATATATGCAAT-C-TGCGTAAACTT-ATGCATAGAGCAGAGAATCTAATTTACCTGTA-----------GCTAT-AGCTCTCCCAAGCACAAATCATGCCAAAGGTAAAACCTGTGTTGTACGTGATTCTGAAAT--GAAGTGGAG--AGGCTAAG--------------------------AGACACCAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 908600 175 - 2200435 TTCAGAGACTTCCCAACTTCCA--GTTTTTGATATATGCAAT-CTTGCGTGAACTT-ATGCATGGAGCAGATAATCTAATTTACCTGTA-----------GCTAT-AGCTCTCCCAAGCACAAATCATG-CAAAGGTAAAACCTGTGTTGTACGTGATTCTGAAAT--GAAGTGGGG--AGGCTAAG--------------------------AAACAACAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1343809 178 - 13651311 TACTGAGTCTTCCCAACTTTCA--GTTTTTGATATATGCAAT-CTTGCATGAACTT-ATGCATGGAGCAGAGAATCGAATTTACCTATA-----------GCTAT-AGCTCTCCTAAGCACAAATCATGCCAAAGGTGAAACCTGTGTTGTATGTGATTCTGAAACTGGAAGTGGAG--GGGCTAAG--------------------------AGACACCAG i colAng1.NW_012118821v1 I 25 C 0 s calJac3.chr14 1350968 204 - 108792865 TTCAGATTCTTCCTAACTTTAA--GGCTTTGATGTACACAAT-CTTGCATGGACTT-AGGCATGGAGAGGAGAATCTAATTTACCAACA-----------GCTGT-AGATCTGCCAAACACAAATTGTGCCAAAGGCAAAACGTGTGTTGTGTGTGCTTCTGAAACTGGAAGTGGAG--GGGCTGAGACATGGACCTGGAATCCACGTGTGCAAGACATCAG i calJac3.chr14 C 0 I 255 s saiBol1.JH378218 1201520 178 - 7082604 CTCAGATTCTTCCCAATGTTAA--GTCTTTGATATACACAGC-CTTGCATGAACTT-AGGCATGGAGATGAGAATCTAATTTAACAATA-----------GCTGT-AGATCTCCCAAGCACAAATTGTGCCAAAGGCAAAACGTGTGTTGTGCGTGCTTCTGAAACTGGAAGGGGAG--GGGCTAAG--------------------------AGACAGCAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1289598 171 + 1864846 TTCAGATTCTTCCCAACTTTAA--GTCTTTGATATACACAAC-CTTGCATGAACTT-AGGCATGGAGAGGAGAATCTAATTTACCAGTA-----------GCTAT-GGATCTCCCAAATACAAA-TGTGCCAAAGGC-AAACGTGTGT-----GTGCTTCTGAAACTGGAAGTGGAG--GGGCTAAG--------------------------AGACACCAG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 81530 178 + 287728 CTCAGATTCTTCCCAACTTTAA--GACTTTGATATACACAGT-CTTGCATGAACTT-AGGCATGGAGAGGAGAATCTAACTTACCAATA-----------GCTAT-AGGTCTCCCAAACACAAATTGTGCCAAAGGCAAAACATGTGTTGTGAGTGCTTCTGAACCTGGAAGTGGAG--GGGCTAAG--------------------------AGACACCAG i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1663472 194 + 4416731 ttCAGATTCTTTCCAACTTTAATGTTTTTTGTTACGGGTAATGCTTGCATGGACTTAATGCATGGAGAGGAGAATCTAACTTACCTGTACGTCACATGCCGCTATGAGGTTTTCCAGGCACAAACATGGCCAAAGGTGAAATGGATGTTTTATGAGGGTCTGAAACTGGAAGTGGGGGAGGGCTAGG--------------------------GGACACT-- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89984948 562 - 120129022 I e otoGar3.GL873658 919940 8 + 5252280 I a score=137051.000000 s hg38.chr2_KI270774v1_alt 87353 17 + 223625 GCAAGCATTTTTTTCAC s panTro5.chr2A 1364954 17 + 111504155 GCAAGCATTTTTTTCAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1325052 17 + 114371477 GCAAGCATTTTTTTCAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1349944 17 + 1464242 GCAAGCATCTTTTTCAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1075600 17 + 81552678 GCAAGCATTTTTTTCAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1405760 17 + 108979918 GCAAGCATTTTTTTCAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1378163 17 - 111193037 GCAAGCATTTTTTTCAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1406590 17 + 3644372 GCAAGCATTTTTTTCAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1360327 17 - 10304083 GCAAGCATTTTTTTCAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1434937 17 - 107702431 GCAAGCATTTTTTTCAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 908775 17 - 2200435 GCAAGCATTTTTTTCAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1343987 17 - 13651311 GCAAGCATTTTTTTCAC i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1201698 15 - 7082604 ACAGGCAT--TTTTCAC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1289769 16 + 1864846 ACAGGCATC-TTTTCAC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 81708 15 + 287728 ACAGGCAC--TTTTTTC i aotNan1.NW_018513311v1 C 0 I 1 s dasNov3.JH576208 1663666 17 + 4416731 GCATATATTTTCTCCAC i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89984948 562 - 120129022 I e otoGar3.GL873658 919940 8 + 5252280 I e calJac3.chr14 1351172 255 - 108792865 I a score=2013804.000000 s hg38.chr2_KI270774v1_alt 87370 214 + 223625 CCTGGAATGCACATGTACAGACCTTGCCAGGTGTTCTCCTTAGATTCCTATCACCTGTGTTGCACGCTGTCTCAAGGGAGGAAATGTGTTCTCCTTAGCCAATTGTG-GTAATGCAGTAGC----------------------CCAT----TCTACAT-CTTTGGTACCCAAAGAGGAGTAGTCA---GGGCCTCCTCTGCTGTGACCCAGTGAGAGG-AAGATTCCTGCTCTCTTTTACTGCAGC s panTro5.chr2A 1364971 214 + 111504155 CCTGGAATGCACATGTACAGACCTTGCCAGGTGTTCTCCTTAGATTCCTATCACCTGTGTTGCACGCTGTCTCAAGGGAGGAAATGCGTTCTCCTTAGCCAATTGTG-GTAATGCAATAGC----------------------CCAT----TCTACAT-CTTTGGTGCCCAAAGAGGAGTAGACA---GGGCCTCCTCTGCTGGGACCCAGTGAGAGG-AAGATTCCTACTCTCTTTTACTGCTGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1325069 214 + 114371477 CCTGGAATGCACATGTACAGACCTTGCCAGGTGTTCTCCTTAGATTCCTATCACCTGTGTTGCACGCTGTCTCAAGGGAGGAAATGTGTTCTCCTTAGCCAATTGTG-GTAATGCAGTAGC----------------------CCAT----TCTACAT-CTTTGGTGCCCAAAGAGGAGTAGACA---GGACCTCCTCTGCTCGGACCCAGTGAGAGG-AAGATTCCTGCTCTCTTTTACTGCAGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1349961 214 + 1464242 CCTGGAATGCACATGTACAGACCTTGCCAGGTGTCCTGCTTAGATTCCAATCACCTGTGTTGCACGCTGTCTCAGGGGAGGAAATGCATTCTCCTTAGCCAATTGTG-GTAATGCAATAGC----------------------CCAT----TCTACAT-CTTTGGTGCCCAAAGAGGAGTAGACA---GGGCCTCCTCTGCTGGGACCCAGTGAGAGG-AACATTCCTGCTCTCTTTTACTGCAGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1075617 213 + 81552678 TCTGGAATGCACATGTACAGACCTTGCCAGGTGTTCTCC-TAGATTCCTATCACCTGTGTTGCACACGGTCTCAAGGGAGGAAACGCATCCTCCTTAGCCAATTGTG-GTAATGTAATAGC----------------------CCAT----TCCACAT-CTTTGGTGCCCAAAGAGGAGTAGACA---GGGCCCCCTCTGCTGGGACCCAATAAGAGA-AAGATTCCTGCTGTCTTTTACTGCAGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1405777 214 + 108979918 CCTGGAATGCACATGTACAGACCTTGCCAGGTGTTCTCCTTAGAGTCCTGTCACTTGCGTTGCACACTGTCTCAAGGGAGGAAATGCATCCTCCTTGGCCAGTTGTG-GTGATGCAATAGC----------------------CCAT----TCTACAT-CTTTGGTGCCCAAAGAGGAGTGGACG---GGGCCCGCTCTGCTGGGACCCCGTGAGAGG-AAGATTCCTGCTCTTTTTTACTGTAGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1378180 214 - 111193037 CCTGGAATGCACATGTACAGACCTTGCCAGGTGTTCTCCTTAGAGTCCTGTCACTTGCGTTGCACACTGTCTCAAGGGAGGAAATGCATCCTCCTTGGCCAGTTGTG-GTGATGCAATAGC----------------------CCAT----TCTACAT-CTTTGGTGCCCAAAGAGGAGTGGACG---GGGCCCGCTCTGCTGGGACCCCGTGAGAGG-AAGATTCCTGCTCTTTTTTACTGTAGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1406607 214 + 3644372 CCTGGAATGCACATGTACAGACCTTGCCAGGTGTTCTCCTTAGAGTCCTGTCACTTGCGTTGCACACTGTCTCAAGGGAGGAAATGCATCCTCCTTGGCCAGTTGTG-GTGATGCAATAGC----------------------CCAT----TCTACAT-CTTTGGTGCCCAAAGAGGAGTGGACG---GGGCTCGCTCTGCTGGGACCCCGTGAGAGG-AAGATTCCTGCTCTTTTTTACTGTAGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1360344 214 - 10304083 CCTGGAATGCACATGTACAGACCTTGCCAGGTGTTCTCCTTAGAGTCCTGTCACTTGCGTTGCACACTGTCTCAAGGGAGGAAATGCATCCTCCTTGGCCAGTTGTG-GTGATGCAATAGC----------------------CCAT----TCTACAT-CTTTGGTGCCCAAAGAGGAGTGGACG---GGGCCCGCTCTGCTGGGACCCCATGAGAGG-AAGATTCCTGCTCTTTTTTACTGTAGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1434954 214 - 107702431 CCTGGAATGCACATGTACAGACCTTGCCAGGTGTTCTCCTTAGATTCCTGTCACTTGCGTTGCACACTGTCTCAAGGGAGGAAATGCATCCTCCTTGGCCAGTTGTG-GTGATGCAATAGC----------------------CCAT----TCTACAT-CTTTGGTGCCCAAAGAGGAGTGGACA---GGGCTCACTCTGCTGGGACCCCGTGAGAGG-AAGATTCCTGCTCTTTTTTACTGTAGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 908792 214 - 2200435 CCTGGAATGCACATGTACAGACCTTGCCAGGTGTTCTCCTTAGAGTCCTATCACTTGCGTTGCACACTGTCTCAAGGGAGGAAATGCATCCTCCTTGGCCAGTTGTG-GTGATGCAATAGC----------------------CCAT----TCTACAT-CTTTGGTGCCCAAAGAGGAGTGGACG---GGGCCCACTCTGCTGGGACCCCGTGAGAGG-AAGATTCCTGCTCTTCTTTACTGTAGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1344004 214 - 13651311 CCTGGAATGCACATGTACAGACCTTGCCAGGTGTTCTCCTTAGATTCCTGTCACCTGCGTTGCACACTGTCTCAAGGGAGGAAATGCATCCTCCTTGGCCAGTTGTG-GTGATGCAATAGC----------------------CCAT----TCTATAT-CCTTGGTGCCCAAAGAGGAGTGGACA---GGGCCTGCTCTGCTGGGACTCTGTGAGAGG-AAGATTCCTGCTCTTTTTTACTGTAGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1351427 213 - 108792865 CCTGGAATCCACGTGTGCAGACCTTGCCAGGCGGTCTCCCTAGATTCCTGTTCCCTGTCTTGCACATTGTCTCAAGGGAGGAATTGCATCCTCCTTAGCCAGTTGTG-CTAATGCAATAGC----------------------CCAT----TCTACAT-CTTCAGTGCCCAGAGAGGAGTAGACA---GG-CCCCTGCTGCTGGAACCCAGGGAGAGG-GAGTTTCCTGCTGTCATTTACTACAGC i calJac3.chr14 I 255 C 0 s saiBol1.JH378218 1201713 213 - 7082604 CCTGGAATCCATGTGTGCAGACCTTGCCAGGTGGTCTCCTTACATTCCTGTGGCCTGTCTTGCACCTCATCTCAAGGGAGGAAGTGCATCCTGCTTAGCCACTTGTG-CCAATGCAATAAC----------------------CCAT----TCTACAT-CCTCAGTGCCCGAAGAGGAGGAGACA---GG-CCCCTGCTGCTGGGACCCAGGGAGAGG-GAGTTTGCTGCTGTCACTTCCTGCAGC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1289785 213 + 1864846 CCTGGAATCCACGTGTGCAGACCTTGCCAGGTGGTCTCCTTAGATTCCTGTGGCCTGTCTTGCACATCGTCTCAAGGGAGGAAGTGCATCCTCCTTAGCCAATTGTG-CTAATGCAATAGC----------------------CCAT----TCTACAT-CTTCAGTGCCCAAAGAGGAGTAGACA---AG-CCCCCGCTGCTGGGACCCAGGGAGAGG-GAGTTTCCTGCTGCCATTTACTGCAGC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 81724 212 + 287728 CCTAGAATCCACGGGTGCAGACCTCGCCAGGTGGTCTCCTTAGGTTCCTATTGCCTGTCTTGCACATCGTCTCGAGGGAGGAAGTGCATCCTCCTTAGCCAATTGTG-CTAATGCAGCAGC----------------------CCAT----TCTACGT-CTCCAGTGTCCAGAGAGGAGTAGACA---GG-CCCCCGCTGCAGGGACCCA-GGAGAGG-GAGTTTCCTGCTGTCATTTACTGCAGC i aotNan1.NW_018513311v1 I 1 C 0 s dasNov3.JH576208 1663683 230 + 4416731 ---------------TGTGGACTCTGCTGTGGATGTTTCCTTGAAT-CTGTCATCTACCTTGCACACTGTAACACAGGGAGAAGCATTTTCTCCTTGACCAGCTGTGAACAACGAAATGGCTGTGTGCGTGTCTTCTCCCCCACCATCAGGTCTACCTCCTTCAGCACCAAAAGGGAAGAAGAGAAATGACTCTTCACTGTAGGGACCCAGGTGGCGATAAGAATCTTGCCATCACTTATTACAGC i dasNov3.JH576208 C 0 I 2 e mm10.chr12 89984948 562 - 120129022 I e otoGar3.GL873658 919940 8 + 5252280 I a score=2362674.000000 s hg38.chr2_KI270774v1_alt 87584 249 + 223625 Ctgtttgggactgaactgtgtccccagggttcctaagttaaagggctgacccccagcatttcagaatgtacctggagataaggttgtcaaagaggtaattaagttaaagtaaggccattaggtttggccctagttacatacaactggtgtctttaataagaagaggagattaggacacagacacacacacagggatgactgtgtgaagacgcaggggaaggtgaccagccagggagagaggcctcagaa s panTro5.chr2A 1365185 249 + 111504155 Ctgtttgggactgaattgtgtccccagggttcctaagttaaagggctgacccccagcatttcagaatgtacctggagataaggttgtcaaagaggtaattaagttaaagtaaggccattaggttcgaccctagttacatacaactggtgtctttaataagaagaggagattaggacacagacacacacagagggatgactatgtgaagacagaggggaaggtgaccagccagggagagaggcctcagaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1325283 249 + 114371477 Ctgtttgggactgaactgtgtccccagggttcctaagttaaagggctgacccccagcatttcagaatgtacctggagataaggttgtcaaagaggtaattaagttaaagtaaggccattaggtttggccctagttacatacaactggtgtctttaataagaagaggagattaggacacagacacacacagagggatgactatgtgaagacacaggggaaggtgaccagccagggagagaggcctcagaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1350175 249 + 1464242 Ctgtttgggactgaactgtgtccccagggttcctaagttaaagggctgacccccagcatttcagaatgtacctggagataaggttgtcaaagaggtaattaagttaaagtaaggccattaggtttggccctagttacatacaactggtgtctttaataagaagaggagattaggacacagacacacacagagggatgactatgtgaagacacaggggaaggtgaccagccagggagagaggcctcagaa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1075830 249 + 81552678 Ctgtttgggactgaattgcatccccaaggttcctatgttaaagggctgacccccagcattttagaatgtacctggacataaggttgtcaaagaggtaattaagttaaaataaggccattaggtttggccctagttccatacatctggtgtctttaataagaagaggagattaagacacagacacacacagagggatcactatgtgaagacacaggggaagatgaccagccagggagagaggcctcagaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1405991 249 + 108979918 Ctgtttgggactgaattgcatccccagggttcctatgttaaaggactgacccccagcatttcagaatatacctggagataaggttgttaaagaggtaattaagttaaagtaaggccattaggtttgcccctagttccttacaactggtgtccttaataagaagaggagattaggacacagacccacacagagggatgactatgtgaagacgcagggaaaggtgaccagtcagggagacaggcctcagaa i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1378394 249 - 111193037 Ctgtttgggactgaattgcatccccagggttcctatgttaaaggactgacccccagcatttcagaatatacctggagataaggttgtcaaagaggtaattaagttaaagtaaggccattaggtttgcccctagttccttacaactggtgtccttaataagaagaggagattaggacacagacccacacagagggatgactatgtgaagacgcagggaaaggtgaccagtcagggagacaggcctcagaa i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1406821 249 + 3644372 Ctgtttgggactgaattgcatccccagggttcctatgttaaaggactgacccccagcatttcagaatatacctggagataaggttgtcaaagaggtaattaagttaaagtaaggccattaggtttgcccctagttccttacaactggtgtccttaataagaagaggagattaggacacagacacacacagagggatgactatgtgaagacgcagggaaaggtgaccagtcagggagacaggcctcagaa i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1360558 249 - 10304083 Ctgtttgggactgaattgcatccccagggttcctatgttaaaggactgacccccagcatttcagaatatacctggagataaggttgtcaaagaggtaattaagttaaagtaaggccattaggtttgcccctagttccttacaactggtgtccttaataagaagaggagattaggacacagacccacacagagggatgactatgtgaagatgcagggaaaggtgaccagtcagggagacaggcctcagaa i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1435168 247 - 107702431 Ctgtttgggactgaattgcatccccagggttcctatgttaaaggactgacccccagcatttcagaatatacctggagctaaggttgtcaaagaggtaattaagttaaagtaaggccattaggtttgtccctagttccttacaactggtgtccttaataagaagaggagattaggacacagacccacacagagggatgac--tgtgaagacgcaggggaaggtggccaggcagggagacaggcctcagaa i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 909006 249 - 2200435 Ctgtttgggactgaattgtatccccagggttcctatgttaaaggactgacccccagcatttcagaatatacctggagataaggttgtcaaagaggtaattaagttaaagtaaggccattaggtttgcccctagttccttacaactggtgtccttaataagaagaggagattaggacacagacccacacagagggatgactatgtgaagacgcagggaaaggtgaccagtcagggagacaggcctcagaa i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1344218 249 - 13651311 Ctgtttgggactgaattgcatccccagggttcctacattaaaggactgacccccagcatttcagaatgtacctggagataaggttgacaaagaggtaattaagttaaagtaaggccattaggtttgtccctagttccttacaactggtgtccttaataagaagaggcgattaggacgcagacccacacagagggatgactatgtgaagacgcaggggaagatgaccagtcagggagacaggcctcagaa i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1351640 244 - 108792865 Ctgtttggggctgaattgtgtccccaagattcctgtgttgaagggctcacccccagcatttcaggatgtacctggagataaggtcgtcaatgaggtaattaaggtaaggtaaggccatcagggttggccccagttccacacaacggttgtccttaata---agaagagatcagaacacagacacccacagagggatgaccatgtgaagattcagggg-agacgagctgccagggag-gaggcctcagag i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1201926 248 - 7082604 Ctgtttggggctgaattgtgtccccaagatttcctgtttgaaaggctgacccccagcatttctgaatgtacctggagataaagttgtcaaagaggtaattaaggtaaggtaaggccattagggttggccctagttccatacaactgttgtccttaataagcagaggagatcagagcacagacacccgcagagggatgaccatgtgaagactcagggg-agatgacctgccggggagagaggcctcagaa i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1289998 247 + 1864846 Ctgtttggggctgaattgtgtccccaaaattcctgtgttgaacagctca-ccgcagcatttcagaatgtacctggagataaggttgtcgaagaggtaatcaaggtaaggtaaggccgttagggttggccctggttccatacaactgttgtccttaataggaagaggagattagaacacagacacccacagagggatggacatgtgaaaactcagggg-agatgacctgccagggagagaggcctcagaa i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 81936 247 + 287728 Ctgtttggggctgaagtgtgtccccaagattcctgtgttggagggctcacccccagcatttcggaatgtacctggagataaggttgtccaagacgtaattaaggtaaggtaaggccattagggttggccttggttccatacaactggtgtccttagtaagaagaggagattagaacacagacacccacagagggatgaccatgtgaagactc-gggg-agatgacctgccagggagagaggcctcagaa i aotNan1.NW_018513311v1 C 0 I 50 e mm10.chr12 89984948 562 - 120129022 I e otoGar3.GL873658 919940 8 + 5252280 I e dasNov3.JH576208 1663913 2 + 4416731 I a score=4241.000000 s hg38.chr2_KI270774v1_alt 87833 1 + 223625 t s panTro5.chr2A 1365434 1 + 111504155 t i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1325532 1 + 114371477 t i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1350424 1 + 1464242 t i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1076079 1 + 81552678 t i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1406240 1 + 108979918 c i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1378643 1 - 111193037 t i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1407070 1 + 3644372 t i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1360807 1 - 10304083 t i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1435415 1 - 107702431 t i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 909255 1 - 2200435 t i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1344467 1 - 13651311 t i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1351884 1 - 108792865 c i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1202174 1 - 7082604 c i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1290245 1 + 1864846 c i cebCap1.NW_016107827v1 C 0 I 16 e aotNan1.NW_018513311v1 82183 50 + 287728 I e mm10.chr12 89984948 562 - 120129022 I e otoGar3.GL873658 919940 8 + 5252280 I e dasNov3.JH576208 1663913 2 + 4416731 I a score=183362.000000 s hg38.chr2_KI270774v1_alt 87834 34 + 223625 gaaaacaacccggccaacatctgactcttggacg s panTro5.chr2A 1365435 34 + 111504155 gaaaacaaccaggccaacatctgactcttggaag i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1325533 34 + 114371477 gaaaacaacccggccaacatctgactcttggacg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1350425 34 + 1464242 gaaaacaacccggccaacatctgactcttggacg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1076080 34 + 81552678 gaaaacaacccggcctacatctgactcttggact i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1406241 34 + 108979918 gaaaacaaccctgccaacatctgactcttggacg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1378644 34 - 111193037 gaaaacaaccctgccaacatctgactcttggacg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1407071 34 + 3644372 gaaaacaaccctgccaacatctgactcttggacg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1360808 34 - 10304083 gaaaacaaccctgccaatatctgactcttggatg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1435416 29 - 107702431 gaaaaca-----gccaacatctgactcttggacg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 909256 34 - 2200435 gaaaacaaccctgccaacatctaactcttggacg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1344468 34 - 13651311 gaaaacaatcctgccaacatctgactcttggacg i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1351885 18 - 108792865 -aaagcggccctgccgaca--------------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1202175 18 - 7082604 -aaagtgaccctgctgacg--------------- i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 82183 50 + 287728 I e mm10.chr12 89984948 562 - 120129022 I e cebCap1.NW_016107827v1 1290246 16 + 1864846 I e otoGar3.GL873658 919940 8 + 5252280 I e dasNov3.JH576208 1663913 2 + 4416731 I a score=447247.000000 s hg38.chr2_KI270774v1_alt 87868 77 + 223625 tttggtctccagaactgtgaagaaacaaatgtccgtggtttaaaccacccagtctgtggtactttgttatggcagtc s panTro5.chr2A 1365469 77 + 111504155 tttggtctccagaactgtgaagatacaaatgtccgtggtttaaaccacccagtctgtggtactttgttatggcagtc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1325567 77 + 114371477 tttggtctccagaactgtgaagaaacagatgtccgtggtttaaaccacccagtctgtggtactttgttatggcagtc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1350459 77 + 1464242 tttggtctccagaactgtgaagaaacaaatgtccgtggtttaaaccacccagtctgtggtactctgttatggcagtc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1076114 76 + 81552678 tttggtctccagaacggtgaagaaacaaatatccacggtttaaaccacctagtctgtggta-tttgttatggcagtc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1406275 77 + 108979918 tttggtctccagaactgtgaagaaacaaatgtccatggtttaatccacccactctgtgatactttgttatggaggtc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1378678 77 - 111193037 tttggtctccagaactgtgaagaaacaaatgtccatggtttaatccacccactctgtgatactttgttatggaggtc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1407105 77 + 3644372 tttggtctccagaactgtgaagaaacaaatgtccatggtttaatccacccactctgtgatactttgttatggaggtc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1360842 77 - 10304083 tttggtctccagaactgtgaagaaacaaatgtccatggtttaatccacccactctgtgatactttgttatggaggtc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1435445 77 - 107702431 tttggtctccagaactgtgaagaaacaaatgtccatggtttaatccacccactcggtggtactttgttacggaggcc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 909290 77 - 2200435 tttggtctccagaactgtgaagaaacaaatgtccatggtttaatccacccactctgtgatactttgttatggaggtc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1344502 77 - 13651311 tttggtctccagaactgtgaagacacaaatgtccatggtttaaaccacccactctgtgatactttgttatggcagtc i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1351903 34 - 108792865 --cggcctccagaactgtgcagaaaC-AAT----------------------------------------GGCCGTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1202193 35 - 7082604 --tggcctccagacctgtgtggaagcaaat----------------------------------------GGCAGTC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1290262 37 + 1864846 tgtggcctccagaactgcgcagaaacaaaC----------------------------------------AGCAGTC i cebCap1.NW_016107827v1 I 16 C 0 e aotNan1.NW_018513311v1 82183 50 + 287728 I e mm10.chr12 89984948 562 - 120129022 I e otoGar3.GL873658 919940 8 + 5252280 I e dasNov3.JH576208 1663913 2 + 4416731 I a score=138853.000000 s hg38.chr2_KI270774v1_alt 87945 22 + 223625 ccaggaaattcatacaCGGTCA s panTro5.chr2A 1365546 22 + 111504155 ccaggaaattcacacaCGGTCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1325644 22 + 114371477 ccaggaaattcatacaCGGTCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1350536 22 + 1464242 ccaggaaagtcatacaCGGTCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1076190 22 + 81552678 ccaggaaattaatacaCGATCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1406352 21 + 108979918 ccaggaaattaatacaCAGCC- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1378755 21 - 111193037 ccaggaaattaatacaCAGCC- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1407182 21 + 3644372 ccaggaaattaatacaCAGCC- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1360919 21 - 10304083 ccaggaaattaatacaCGGCC- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1435522 21 - 107702431 ccaggaaattaacacaCAGCC- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 909367 21 - 2200435 ccaggaaattaacacaCGGCC- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1344579 22 - 13651311 ccaggaaattaatacaCAGCCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1351937 20 - 108792865 -A-GGAAATTAAAACACCGTCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1202228 21 - 7082604 -CTGGAAATCAAAACACCGTCA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1290299 21 + 1864846 -CCGGAAATTAAAACACCGACA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 82233 22 + 287728 CCAGGAAATTGAAACACCGTCA i aotNan1.NW_018513311v1 I 50 C 0 e mm10.chr12 89984948 562 - 120129022 I e otoGar3.GL873658 919940 8 + 5252280 I e dasNov3.JH576208 1663913 2 + 4416731 I a score=207158.000000 s hg38.chr2_KI270774v1_alt 87967 19 + 223625 TTTCTTTCTTTCTAGAAGG s panTro5.chr2A 1365568 19 + 111504155 TTTCTTTCTTTCTAGAAGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1325666 19 + 114371477 TTTCTTTCTTTCTAGAAGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1350558 19 + 1464242 TTTCTTTCTTTCTAGAAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1076212 19 + 81552678 TTTCTTTCTTTCTAGAAGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1406373 19 + 108979918 TTTCTTTCTTTTTAGAAGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1378776 19 - 111193037 TTTCTTTCTTTTTAGAAGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1407203 19 + 3644372 TTTCTTTCTTTTTAGAAGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1360940 19 - 10304083 TTTCTTTCTTTTTAGAAGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1435543 19 - 107702431 TTTCTTTCTTTTTAGAAGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 909388 19 - 2200435 TTTCTTTCTTTTTAGAAGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1344601 19 - 13651311 TTTCTTTCTTTCTAGAAGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1351957 19 - 108792865 CTTCTATCTTTCTAGAAGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1202249 19 - 7082604 CTTCTTTCTTTCTAGAAGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1290320 19 + 1864846 CTTCTTTCTTTCTAGAAGG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 82255 19 + 287728 CGTCTTTCTTCCTAGAAGG i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1663915 19 + 4416731 TTTCCTTCCTCCCAGGAGA i dasNov3.JH576208 I 2 C 0 e mm10.chr12 89984948 562 - 120129022 I e otoGar3.GL873658 919940 8 + 5252280 I a score=1088676.000000 s hg38.chr2_KI270774v1_alt 87986 105 + 223625 CTGCAGCATTGGTTTTCTATTAAATCATTCTATTGAATTTATCAC--AAAAA-GTA-AGGTATTTTATAATCCAGTCCTTTTTTCTTACCTTTCAAGATTAATTTTATA s panTro5.chr2A 1365587 105 + 111504155 CTGCAGCATTGGTTTTCTATTAAATCATTCTATTGAATTTATCAC--AAAAA-GTA-AGGTATTTTATAATCCAGTCCTTTTTTCTTACCTTTCAAGATTAATTTTATA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1325685 105 + 114371477 CTGCAGCATTGGTTTTCTATTAAATCATTCTATTGAATTTATCAC--AAAAA-GTA-AGGTATTTTATAATCCAGTCCTTTTTTCTTACCTTTCAAGATTAATTTTATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1350577 105 + 1464242 CTGCAGCATTGCTTTTCTATTAAATCATTCTATTGAGTTTATCAC--AAAAA-GTA-AGGTATTTTATAATCCAGTCCTTTTTTCTTACCTTTCAAGATTAATTTTATA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1076231 105 + 81552678 CTGCAGCATTGGTTTTCTATTAAATCATTCTATTGAATTTATCAC--AAAAA-GTA-GGGTATTTTATAATCCAGTCCTTTTTTCTTACCTTTCAAGATTAATTTTATA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1406392 105 + 108979918 CTGCAGCATCGGTTTTCTATTAAATCGTTCTATTGAATTTATCAC--AAAAA-GTA-AGGTATTTTATAATCTAGTCCGTTTTTCTCATCTTTCAAGATTAATTTTATA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1378795 105 - 111193037 CTGCAGCATCGGTTTTCTATTAAATCGTTCTATTGAATTTATCAC--AAAAA-GTA-AGGTATTTTATAATCTAGTCCGTTTTTCTCACCTTTCAAGATTAATTTTATA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1407222 105 + 3644372 CTGCAGCATCGGTTTTCTATTAAATCGTTCTATTGAATTTATCAC--AAAAA-GTA-AGGTATTTTATAATCTAGTCCGTTTTTCTCACCTTTCAAGATTAATTTTATA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1360959 105 - 10304083 CTGCAGCATTGGTTTTCTATTAAATCATTCTATTGAATTTATCAC--AAAAA-GTA-AGGTATTTTATAATCTAGTCCGTTTTTCTCACCTTTCAAGATTAATTTTATA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1435562 105 - 107702431 CTGCAGCATTGGTTTTCTACTAAATCGTTCTATTGAATTTATCAC--AAAAA-GTA-AGGTATTTTATAATCTAGTCCTTTTTTCTTACCTTTCAAGATGAATTTTATA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 909407 105 - 2200435 CTGCAGCATTGGTTTTCTATTAAATCGTTCTATTGAATTTATCAC--AAAAA-GTA-AGGTATTTTATAATCTAGTCCGTTTTTCTCACCTTTCAAGATTAATTTTATA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1344620 105 - 13651311 TTGCAGCATTGGTTTTCTATTAAATTGTTCTATTGAATTTATCAC--AAAAA-GTA-AAGTATTTTATAATCTAGTCCTTTTTTCTTATGTTTCAAGATTAATTTTATA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1351976 105 - 108792865 CTGCAGCATTGGTTTTCTATTTAGTCATTCTATTGAATTT-TCAC-AAAAAA-GCG-AGGTAGTTTATAATTTAGTTCTTTTGTCTTACTTTTCAAGATTAGTTTTATA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1202268 107 - 7082604 CTGCAGCATTGCTTTTCTATTGAATCCTTCTATTGAATTTATCACAAAAAAA-GCA-AGGCAGTTTATAGTTTAGTTATTTTTTCTTTCTTTTCAAGATTAATTTTATA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1290339 106 + 1864846 CTGCAGCATTGGTTTTCTATTAAATCATTCTATTGAATTTATCAT-AAAAAA-GCA-AAGTCATTTATAATTAAGTTGTTTTTTCTTCCTTTTCAAGATGAATTTTGTA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 82274 106 + 287728 CTGCAGCACTGGTTTCTTATTAAATCATTCTGTTGAGTTTATCAC-AGAAAA-GCA-AGGTAGTTTATAATTTAGTTCTTTTTTCTTACTTTTCAAGATTAATTTTATA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 919948 92 + 5252280 CCACAGAGCTGGATCTCTATTAAATCAT-------------TCAT--AAACATGCA-AGAACTTTCATAATCTGGTCC-TTTTTCTTACCTTTTGAGATTAATTTTTCA i otoGar3.GL873658 I 8 C 0 s dasNov3.JH576208 1663934 97 + 4416731 CGGCAGAGTTGAATTTGTATTGAGTAATTCTATTGAATGCATCAT-GAGGAA-ATACAAGTCCTTTCTAATCTAGTCCTCATTT----------ACGATTAATTATACA i dasNov3.JH576208 C 0 I 8 e mm10.chr12 89984948 562 - 120129022 I a score=794728.000000 s hg38.chr2_KI270774v1_alt 88091 84 + 223625 GCGCTGGTT--------ATTATCTGTAGTTCACCCTTACAATAATTCAATCAGTTATTTAAATATGTCATTCATTTATTCAC----TTCATTCTTT---- s panTro5.chr2A 1365692 84 + 111504155 GTGCTGGTT--------ATTATCTATAGTTCACCCTTACAATAATTCAATCAGTTATTTAAATATGTCATTCATTTATTCAC----TTCATTCTTT---- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1325790 84 + 114371477 GCACTGGTT--------ATTATCTGTAGTTCACCCTTACAATAATTCAATCAGTTATTTAAATATGTCATTCATTTATTCAC----TTCATTCTTT---- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1350682 84 + 1464242 GCGCTGGTT--------ATTATCTATAGTTCACCCTTACAATAATTCAATCAGTTATTTAAATATGTCATTCATTTATTCAC----TTCATTCTTT---- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1076336 88 + 81552678 GCACTGGTT--------ATTATCTATAGTTTACCCTTACAATAATTCAATCAGTTATTTAAACATGTcattcattcattcatttcattcattcctt---- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1406497 84 + 108979918 GCACTGGTT--------ATTCTCTACAGTTCACCCTCACAATAATTCAATCAGTTATTTAAATATGTCCCTCATTTATTCAC----TTCATTCCTT---- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1378900 84 - 111193037 GCGCTGGTT--------ATTCTCTACAGTTCACCCTCACAATAATTCAATCAGTTATTTAAATATGTCACTCATTTATTCAC----TTCATTCCTT---- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1407327 84 + 3644372 GCACTGGTT--------ATTCTCTACAGTTCACCCTCACAATAATTCAATCAGTTATTTAAATATGTCACTCATTTATTCAC----TTCATTCCTT---- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1361064 84 - 10304083 GCACTGGTT--------ATTCTCTACAGTTCACCCTCACAATAATTCAATCAGTTATTTAAATATGTCACTCATTTATTCAC----TTCATTCCTT---- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1435667 83 - 107702431 GCACTGGTT--------ATTCTCTACAGTTCACCCT-ACAATAATTCAATCAGTTATTTAAATAGGTCACTCATTTATTCAC----TTCATTCCTT---- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 909512 84 - 2200435 GCACTGGTT--------ATTCTCTACAGTTCACCCTCACAATAATTCAATCAGTTATTTAAATATGTCACCCATTTATTCAC----TTCATTCCTT---- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1344725 84 - 13651311 GCACTGGTT--------ATTCTCTACAGTTCACCCTCACAATAGTTCAATCAGTTATTTAAATATGTCATTCATTTATTCTC----TTCATTCCTT---- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1352081 82 - 108792865 GCCCCAGTT--------ATTCTCTACAGTTTGCCATCACAATAATTAAGTCAGTTGTTTAAAT--GTCATTCACTTATTCAC----TTcatccatt---- i calJac3.chr14 C 0 I 4 s saiBol1.JH378218 1202375 82 - 7082604 GCACCAGTT--------ATTCTCTACAGTTTGCCTTCACAATAATTAACTCGGTTATTTAAAT--Gtcattcatttattcac----ttcatccatt---- i saiBol1.JH378218 C 0 I 4 s cebCap1.NW_016107827v1 1290445 82 + 1864846 GCACCAGTT--------ATTCTCTACAGTTCGCCCTCACAATAATTAAGTCAGTTATTTAAAT--GTcattcatttattcac----ttcctccatt---- i cebCap1.NW_016107827v1 C 0 I 4 s aotNan1.NW_018513311v1 82380 80 + 287728 ATACCAGAT--------ATTCTCTACAGTTTGCCCTCACAATAattaagtcagttatttaa----gtcattcatttattcac----ttcatccttt---- i aotNan1.NW_018513311v1 C 0 I 1134 s otoGar3.GL873658 920040 96 + 5252280 ATGCTGGTCTCCTGCTGGTTCCTTACAATCCATCCTTACTATGATCCAGTCAGTTCTTCAAATGGGTCATTCACTCATTCAC----TTCATTCACTGTTT i otoGar3.GL873658 C 0 C 0 e mm10.chr12 89984948 562 - 120129022 I e dasNov3.JH576208 1664031 8 + 4416731 I a score=651023.000000 s hg38.chr2_KI270774v1_alt 88175 80 + 223625 Tatccatcgacccattcacacatgtacccacgcagccatccattcctttattcactcatccatgcatcccacccacccac s panTro5.chr2A 1365776 80 + 111504155 Tatccatcgacccattcacacatgtacccacgcagccatccattcctttattcactcatccatgcatcccacccacccac i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1325874 80 + 114371477 Tatccatcaacccattcacacatgtacccacgcagccatccattcctttattcactcatccatgcatcccacccacccac i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1350766 80 + 1464242 Tatccatcgacccattcacacatgtacccacgcagccatccattcctttattcactcatccatgcatcccacccacccac i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1076424 80 + 81552678 tatccatccacccattcacaaatgtacccacacagccatccattcctttattcactcatccatgcatcccacccacccac i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1406581 79 + 108979918 Tatccatccacccattcacacatgtacccacgcagccatccattcc-ttattcattcatccatgcatcccacccacccag i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1378984 79 - 111193037 Tatccatccacccattcacacatgtacccacgcagccatccattcc-ttattcattcatccatgcatcccacccacccag i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1407411 79 + 3644372 Tatccatccacccattcacacatgtacccacgcagccatccattcc-ttattcattcatccatgcatcccacccacccag i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1361148 79 - 10304083 Tatccatccacccattcacacatgtacccacgcagccatccattcc-ttattcattcatccatgcatcccacccacccag i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1435750 79 - 107702431 Tatccatccacccattcacacatgtacccacgcagccatccattcc-ttattcattcatccatgcatcccacccacccag i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 909596 79 - 2200435 Tatccatccacccattcacacatgtacccacgcagccatccattcc-ttattcattcatccatgcatcccacccacccag i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1344809 75 - 13651311 Tatccatccacccattcacacatgtacccacgcagccatccattcc-ttactcattcatccatgcatcccacccac---- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1352167 72 - 108792865 tatccatccacccattcacacttgtacccatgcggccatccattcatttattcactcatccatgaatccca----c---- i calJac3.chr14 I 4 C 0 s saiBol1.JH378218 1202461 76 - 7082604 tatccatccacccattcacacttgtacccgtgcagccatccattcatttgttcactcatccatgcatcccacccgc---- i saiBol1.JH378218 I 4 C 0 s cebCap1.NW_016107827v1 1290531 80 + 1864846 tatccatccactcattcacacttgcacccatgcagccatccattcatttattcactcacccatgcatcccacccacccac i cebCap1.NW_016107827v1 I 4 I 546 s otoGar3.GL873658 920136 34 + 5252280 TACTCATCTGCCCAGTGGCA---------------------------------------------ATcccacccatcca- i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 82460 1134 + 287728 I e mm10.chr12 89984948 562 - 120129022 I e dasNov3.JH576208 1664031 8 + 4416731 I a score=329356.000000 s hg38.chr2_KI270774v1_alt 88255 47 + 223625 ccgcatagacatcgagtcatccat--------------------------------cggcccattcacccatccaccca s panTro5.chr2A 1365856 47 + 111504155 ccacatagacatcgagtcatccat--------------------------------cggcccattcacccatccaccca i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1325954 47 + 114371477 ccacatagacatcgagtcatccat--------------------------------cggcccattcacccatccaccca i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1350846 47 + 1464242 ccgcatagacatcgactcatccat--------------------------------cggcctattcacccatctaccca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1076504 47 + 81552678 ccacatagacatcaactcatccat--------------------------------ctgcccattcacccatccaccca i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1406660 47 + 108979918 ccacatagacatcgactcatccat--------------------------------ctgcccattcacccacccaccca i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1379063 47 - 111193037 ccacatagacatcgactcatccat--------------------------------ctgcccattcacccacccaccca i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1407490 47 + 3644372 ccacatagacattgactcatccat--------------------------------ctgcccattcacccacccaccca i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1361227 47 - 10304083 ccacatagacatcgactcatccat--------------------------------ctgcccattcacccacccaccca i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1435829 47 - 107702431 ccacatagacatcgactcatccat--------------------------------ctgcccattcacccacccaccca i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 909675 47 - 2200435 ccacatagacatcgactcatccat--------------------------------ctgcccattcacccacccaccca i manLeu1.NW_012103754v1 C 0 I 55 s colAng1.NW_012118821v1 1344884 47 - 13651311 ccacatagacatcgactcatccat--------------------------------ctgcccattcacccacccgccca i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1352239 46 - 108792865 ccacatagac-tccactcatccat--------------------------------ccacccacccacctattcattca i calJac3.chr14 C 0 I 12 s saiBol1.JH378218 1202537 79 - 7082604 ccacatagacatccacccatccatctgccccttcaccctcctgcctacccattcacccacccacccacctatccattca i saiBol1.JH378218 C 0 I 12 s otoGar3.GL873658 920170 28 + 5252280 -------aacaccaactcatccac--------------------------------ccaaccactca------------ i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 82460 1134 + 287728 I e mm10.chr12 89984948 562 - 120129022 I e cebCap1.NW_016107827v1 1290611 546 + 1864846 I e dasNov3.JH576208 1664031 8 + 4416731 I a score=18447.000000 s hg38.chr2_KI270774v1_alt 88302 10 + 223625 ttcaatcatc s panTro5.chr2A 1365903 10 + 111504155 ttcaatcatc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1326001 10 + 114371477 ttcaatcatc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1350893 10 + 1464242 ttcaatcatc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1076551 10 + 81552678 ttcaatcatc i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1352297 10 - 108792865 TTCAATCAGC i calJac3.chr14 I 12 C 0 s saiBol1.JH378218 1202628 10 - 7082604 ttcaatcatc i saiBol1.JH378218 I 12 C 0 e aotNan1.NW_018513311v1 82460 1134 + 287728 I e mm10.chr12 89984948 562 - 120129022 I e cebCap1.NW_016107827v1 1290611 546 + 1864846 I e otoGar3.GL873658 920198 0 + 5252280 C e dasNov3.JH576208 1664031 8 + 4416731 I e colAng1.NW_012118821v1 1344931 0 - 13651311 C e manLeu1.NW_012103754v1 909722 55 - 2200435 I e chlSab2.chr14 1435876 0 - 107702431 C e cerAty1.NW_012000820v1 1361274 0 - 10304083 C e macNem1.NW_012011978v1 1407537 0 + 3644372 C e macFas5.chr13 1379110 0 - 111193037 C e rheMac8.chr13 1406707 0 + 108979918 C a score=116141.000000 s hg38.chr2_KI270774v1_alt 88312 68 + 223625 att---cgcctatccatccatt-catca-tccaccca-cccatttatccat--tatcca-cc--cacccatccaccc-at s panTro5.chr2A 1365913 68 + 111504155 att---cgcctatccatccatt-catca-tccaccca-cccatttatccat--tatcca-cc--cacccatccaccc-at i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1326011 68 + 114371477 att---cgcctatccatccatt-catca-tccaccca-cccatttatccat--tatcca-cc--cacccatccaccc-at i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1350903 67 + 1464242 att---cgcctatccatccatt-catca-tcca-cca-cccatttatccat--tatcca-cc--cacccatccaccc-at i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1076561 68 + 81552678 att---tgcctatccatccatt-catca-tccatcca-tccatttatccat--tatcca-cc--cacccatccatcc-at i nomLeu3.chr19 C 0 I 3 s rheMac8.chr13 1406707 55 + 108979918 --------cctgtcca--------gtca-cccatcca-cccattcagtcat--catttg-cc--tatccatccattc-a- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1379110 55 - 111193037 --------cctgtcca--------gtca-cccatcca-cccattcagtcat--cattcg-cc--tatccatccattc-a- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1407537 55 + 3644372 --------cctgtcca--------gtca-cccatcca-cccattcagtcat--cattcg-cc--tatccatccattc-a- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1361274 55 - 10304083 --------cctgtcca--------gtca-ccgatcca-cccattcagtcat--cattcg-cc--tatccatccattc-a- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1435876 55 - 107702431 --------cctgtcca--------gtca-cccatcca-cccattcagtcat--cattcg-cc--tatccatccattc-a- i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1344931 25 - 13651311 --------cctgtcca--------ttca-cccatcca-cccat------------------------------------- i colAng1.NW_012118821v1 C 0 I 7 s calJac3.chr14 1352307 69 - 108792865 ATTG--GGGCTATCCA----TTGTATCACCCCACCCACCCcatttattcat--tatccagcc--caggcatccattcaa- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1202638 60 - 7082604 att---cgcctatcca----tt-tatca-cccaccca-tccatttattcat--tcaccg------aggcatccatcc-a- i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 920198 37 + 5252280 ------------------------ttca-tctacaca-ccagtttactcac-----ccg-cc--tacccat--------- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89985510 64 - 120129022 ---ATGTGCCTAt-cattcattcattca-ttcattca-ctcattcacttattTTATCCA-CCTTTACTCAT--------- i mm10.chr12 I 562 C 0 e aotNan1.NW_018513311v1 82460 1134 + 287728 I e cebCap1.NW_016107827v1 1290611 546 + 1864846 I e dasNov3.JH576208 1664031 8 + 4416731 I e manLeu1.NW_012103754v1 909722 55 - 2200435 I a score=197647.000000 s hg38.chr2_KI270774v1_alt 88380 40 + 223625 tcatcc-atccattcatccatccactcattcattcatccat s panTro5.chr2A 1365981 40 + 111504155 tcatcc-atccattcatccatccactcattcattcatccat i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1326079 32 + 114371477 tcatcc-atccactcat--------tcattcatccatccat i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1350970 36 + 1464242 tcatcc-atccattcatccatccatccattcattcat---- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1076632 40 + 81552678 tcatcc-actcactcatccatccacccacccatttgtccat i nomLeu3.chr19 I 3 C 0 s rheMac8.chr13 1406762 39 + 108979918 tcatcc-acccacccatccatcca-tcattcactcactcat i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1379165 39 - 111193037 tcatcc-acccacccatccatcca-tcattcactcactcat i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1407592 39 + 3644372 tcatcc-acccacccatccatcca-tcattcactcactcat i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1361329 39 - 10304083 tcatcc-acccacccatccatcca-tcattcactcactcat i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1435931 39 - 107702431 tcatcc-acccacccatccatcca-tcattcactcactcat i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 909777 39 - 2200435 tcatcc-acccacccgtccatcca-tcattcactcactcat i manLeu1.NW_012103754v1 I 55 C 0 s colAng1.NW_012118821v1 1344963 24 - 13651311 tcattc-acctatccatccattca-t--------------- i colAng1.NW_012118821v1 I 7 C 0 s calJac3.chr14 1352376 41 - 108792865 tcattcgactcactgatccatccactgacgcgttcatccat i calJac3.chr14 C 0 I 429 s saiBol1.JH378218 1202698 40 - 7082604 tcatcc-actcactgatccatccactcacccattcatccgt i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 920235 30 + 5252280 tcatcc-acata-----ccacccacccattcattca----- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89985574 37 - 120129022 TCACCC-ACCAATCTGCCCATA---TCTTTCGAGTGCCTAT i mm10.chr12 C 0 C 0 e aotNan1.NW_018513311v1 82460 1134 + 287728 I e cebCap1.NW_016107827v1 1290611 546 + 1864846 I e dasNov3.JH576208 1664031 8 + 4416731 I a score=44373.000000 s hg38.chr2_KI270774v1_alt 88420 10 + 223625 ccatccattt s panTro5.chr2A 1366021 10 + 111504155 ccatccattt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1326111 10 + 114371477 ccatttatcc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1351006 9 + 1464242 -catccatcc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1076672 10 + 81552678 ccattcatcc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1406801 10 + 108979918 ccatccaccc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1379204 10 - 111193037 ccatccaccc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1407631 10 + 3644372 ccatccaccc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1361368 10 - 10304083 ccatccaccc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1435970 10 - 107702431 ccatccaccc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 909816 10 - 2200435 ccatccaccc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1344987 9 - 13651311 -catccaccc i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1202738 10 - 7082604 ccacccTCTC i saiBol1.JH378218 C 0 I 11 s otoGar3.GL873658 920265 5 + 5252280 -cattg---- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89985611 10 - 120129022 GTATGTATTG i mm10.chr12 C 0 C 0 e aotNan1.NW_018513311v1 82460 1134 + 287728 I e cebCap1.NW_016107827v1 1290611 546 + 1864846 I e dasNov3.JH576208 1664031 8 + 4416731 I e calJac3.chr14 1352417 429 - 108792865 I a score=227373.000000 s hg38.chr2_KI270774v1_alt 88430 39 + 223625 atccatccatccatc-catcatccacccacccattaat-ca s panTro5.chr2A 1366031 39 + 111504155 atccatccatccatc-catcatccacccacccattaat-ca i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1326121 39 + 114371477 atccatccatgcatc-catcatccacccacccattaat-ca i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1351015 38 + 1464242 atccatccatccatc-catcat-cacctacccattaat-ca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1076682 28 + 81552678 atccatccactcatc-catcatccac-----------t-ca i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1406811 39 + 108979918 acccattcatccatc-catcatccatcctcccattaat-ca i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1379214 39 - 111193037 acccattcatccatc-catcatccatcctcccattaat-ca i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1407641 39 + 3644372 acccattcatccatc-catcatccatcctcccattaat-ca i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1361378 39 - 10304083 acccattcatccatc-catcatccatcctcccattaat-ca i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1435980 39 - 107702431 atccattcatccatc-cattatccatcctcccattaat-ca i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 909826 39 - 2200435 acccattcatccatc-catcatccatcctcccattaat-ca i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1344996 39 - 13651311 acccattcatccatc-catcatccatcctcccattaat-ca i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1352846 32 - 108792865 ATTCATCTATCCATC-CATTATCCAC-------ATAAT-CA i calJac3.chr14 I 429 C 0 s saiBol1.JH378218 1202759 32 - 7082604 ATTTATCTGTCCATC-CATCATCCAC-------ATAGT-CA i saiBol1.JH378218 I 11 C 0 s otoGar3.GL873658 920270 21 + 5252280 ctccatccactcatc-tgt------------------t-cc i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89985621 37 - 120129022 ----atacatcaatctctttatctcctcacatatcaatcca i mm10.chr12 C 0 C 0 e aotNan1.NW_018513311v1 82460 1134 + 287728 I e cebCap1.NW_016107827v1 1290611 546 + 1864846 I e dasNov3.JH576208 1664031 8 + 4416731 I a score=160939.000000 s hg38.chr2_KI270774v1_alt 88469 30 + 223625 ctcacacacatatccatccatcca-tcatcc s panTro5.chr2A 1366070 26 + 111504155 ctcacacaca----catccatcca-tcatcc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1326160 26 + 114371477 ctcacacatc----catccatcca-tcatcc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1351053 30 + 1464242 ctcacacacacatccatccatcca-tcatcc i gorGor5.CYUI01015607v1 C 0 I 172 s nomLeu3.chr19 1076710 22 + 81552678 ctcatccata----cgcccaccca-tc---- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1406850 22 + 108979918 ct----caca----catccatcca-tcatcc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1379253 22 - 111193037 ct----caca----catccatcca-tcatcc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1407680 26 + 3644372 ctcacacaca----catccatcca-tcatcc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1361417 26 - 10304083 ctcacacaca----catccatcca-tcatcc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1436019 26 - 107702431 ctcacacaca----catccatcca-tcatcc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 909865 26 - 2200435 ctcacacaca----catccatcca-tcatcc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1345035 26 - 13651311 ctcacacaca----catccatcca-tcatcc i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1352878 22 - 108792865 GTCACACACA--------CATTCG-Tcatcc i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1202791 28 - 7082604 TGCACACACACA--cattcattca-tcatcc i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 920291 27 + 5252280 ttcacacact----cacccactcattcattc i otoGar3.GL873658 C 0 I 2 s mm10.chr12 89985658 26 - 120129022 tgtaaccacc----tatccatcca-tcatcc i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1664039 26 + 4416731 CTCCTGCTCATTCCCATCAATCCA-TC---- i dasNov3.JH576208 I 8 C 0 e aotNan1.NW_018513311v1 82460 1134 + 287728 I e cebCap1.NW_016107827v1 1290611 546 + 1864846 I a score=3363.000000 s hg38.chr2_KI270774v1_alt 88499 2 + 223625 at s panTro5.chr2A 1366096 2 + 111504155 ac i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1326186 2 + 114371477 ac i panPan2.chr2A C 0 C 0 s rheMac8.chr13 1406872 2 + 108979918 ac i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1379275 2 - 111193037 ac i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1407706 2 + 3644372 ac i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1361443 2 - 10304083 ac i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1436045 2 - 107702431 ac i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 909891 2 - 2200435 ac i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1345061 2 - 13651311 ac i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1352900 2 - 108792865 ac i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1202819 2 - 7082604 tc i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 920320 1 + 5252280 G- i otoGar3.GL873658 I 2 C 0 s mm10.chr12 89985684 2 - 120129022 at i mm10.chr12 C 0 C 0 e aotNan1.NW_018513311v1 82460 1134 + 287728 I e cebCap1.NW_016107827v1 1290611 546 + 1864846 I e dasNov3.JH576208 1664065 0 + 4416731 C e nomLeu3.chr19 1076732 0 + 81552678 C e gorGor5.CYUI01015607v1 1351083 172 + 1464242 I a score=62442.000000 s hg38.chr2_KI270774v1_alt 88501 13 + 223625 tcac----t----------------catccatg s panTro5.chr2A 1366098 13 + 111504155 tcac----t----------------catccatg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1326188 13 + 114371477 tcac----t----------------catccatg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1351255 12 + 1464242 tcac----t----------------catccat- i gorGor5.CYUI01015607v1 I 172 C 0 s nomLeu3.chr19 1076732 12 + 81552678 -cac----c----------------tgtccacc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1406874 13 + 108979918 tcac----t----------------catccata i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1379277 13 - 111193037 tcac----t----------------catccata i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1407708 13 + 3644372 tcac----t----------------catccata i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1361445 13 - 10304083 tcac----t----------------catccata i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1436047 13 - 107702431 tcac----t----------------catccata i chlSab2.chr14 C 0 I 194 s manLeu1.NW_012103754v1 909893 13 - 2200435 tcac----t----------------catccata i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1345063 13 - 13651311 tcac----t----------------catccata i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1352902 13 - 108792865 ctac----t----------------catccacc i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1202821 29 - 7082604 ctac----tcatccatacacccacccatccacc i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 920321 6 + 5252280 TTGC----t----------------c------- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89985686 17 - 120129022 tcacaggtt----------------tatccatt i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1664065 10 + 4416731 ---C----T----------------CACAAAGA i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 82460 1134 + 287728 I e cebCap1.NW_016107827v1 1290611 546 + 1864846 I a score=38467.000000 s hg38.chr2_KI270774v1_alt 88514 4 + 223625 cacc s panTro5.chr2A 1366111 4 + 111504155 cacc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1326201 4 + 114371477 cacc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1351267 4 + 1464242 cacc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1076744 4 + 81552678 catc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1406887 4 + 108979918 cacc i rheMac8.chr13 C 0 I 16 s macFas5.chr13 1379290 4 - 111193037 cacc i macFas5.chr13 C 0 I 16 s macNem1.NW_012011978v1 1407721 4 + 3644372 cacc i macNem1.NW_012011978v1 C 0 I 16 s cerAty1.NW_012000820v1 1361458 4 - 10304083 cacc i cerAty1.NW_012000820v1 C 0 I 16 s chlSab2.chr14 1436254 4 - 107702431 cacc i chlSab2.chr14 I 194 C 0 s manLeu1.NW_012103754v1 909906 4 - 2200435 cacc i manLeu1.NW_012103754v1 C 0 I 5239 s colAng1.NW_012118821v1 1345076 4 - 13651311 cacc i colAng1.NW_012118821v1 C 0 I 16 s calJac3.chr14 1352915 4 - 108792865 cgtc i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1202850 4 - 7082604 cgtc i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 920327 4 + 5252280 cacc i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89985703 4 - 120129022 catc i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1664075 4 + 4416731 TACT i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 82460 1134 + 287728 I e cebCap1.NW_016107827v1 1290611 546 + 1864846 I a score=30689.000000 s hg38.chr2_KI270774v1_alt 88518 4 + 223625 caca- s panTro5.chr2A 1366115 4 + 111504155 cacc- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1326205 4 + 114371477 cacc- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1351271 4 + 1464242 cacc- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1076748 4 + 81552678 cacc- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1406907 4 + 108979918 cacc- i rheMac8.chr13 I 16 C 0 s macFas5.chr13 1379310 4 - 111193037 cacc- i macFas5.chr13 I 16 C 0 s macNem1.NW_012011978v1 1407741 4 + 3644372 cacc- i macNem1.NW_012011978v1 I 16 C 0 s cerAty1.NW_012000820v1 1361478 4 - 10304083 cacc- i cerAty1.NW_012000820v1 I 16 C 0 s chlSab2.chr14 1436258 4 - 107702431 cacc- i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1345096 4 - 13651311 cacc- i colAng1.NW_012118821v1 I 16 C 0 s calJac3.chr14 1352919 4 - 108792865 cacc- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1202854 4 - 7082604 cacc- i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 920331 4 + 5252280 caca- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89985707 4 - 120129022 cacc- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1664079 4 + 4416731 -GCCA i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 82460 1134 + 287728 I e cebCap1.NW_016107827v1 1290611 546 + 1864846 I e manLeu1.NW_012103754v1 909910 5239 - 2200435 I a score=482551.000000 s hg38.chr2_KI270774v1_alt 88522 82 + 223625 catccatccattca---tcatccat-ccacccactcg--ttcatccacccattcacccatccaccccct-----------------------catccatccttttattact s panTro5.chr2A 1366119 82 + 111504155 catccatccattca---tcatccat-ccatccactcg--ttcatccacccattcacccatccaccccct-----------------------catccatccttttattact i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1326209 82 + 114371477 catccatccattca---tcatccat-ccatccactcg--ttcatccacgcattcacccatccaccccct-----------------------catccatccttttattact i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1351275 78 + 1464242 catccatccattcatcttcatccat-ccacccactca--ttcatccacccattcacccatccaccccct-----------------------cacccatcct-------ct i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1076752 79 + 81552678 catccatccattca---tcatccat-ccacccactca--ttcatctacccattcacccatccaccccct-----------------------catccatccttttatt--- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1406911 78 + 108979918 catccgtccattca---tcatccat-ccaccaactca--ttcatccac-cattcacccatccatcccct-----------------------catccatccttttatt--- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1379314 81 - 111193037 catccatccattca---tcatccat-ccaccaactca--ttcatccac-cattcacccatccatcccct-----------------------catccatccttttattact i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1407745 81 + 3644372 catccatccattca---tcatccat-ccaccaactca--ttcatccac-cattcacccatccatcccct-----------------------catccatccttttattact i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1361482 80 - 10304083 catccatccattca---tcatccat-ccaccaactca--ttcatccac-cattcacccatccatcccct-----------------------catccatcc-tttattact i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1436262 81 - 107702431 catccatccattca---tcatccat-ccacccactca--ttcatccac-cattcacccatccatcccct-----------------------catccatccttttattact i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 915149 81 - 2200435 catccatccattca---tcatccat-ccaccaactca--ttcatccac-cattcacccatccatcccct-----------------------catccatcctttttttact i manLeu1.NW_012103754v1 I 5239 C 0 s colAng1.NW_012118821v1 1345100 81 - 13651311 catccatccattca---tcatccat-ccacccactta--ttcatccac-cattcacccatccatcccct-----------------------catccatccttttattact i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1352923 71 - 108792865 catctatccattcc---tcatccat-ccacccactca---tcatccacccattcaccta---------------------------------cgcccatccatctgttatc i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1202858 105 - 7082604 tgtccatccattcc---tcatccat-ccacgcactca--ttcatccacccattcacccacccaccccctcatccatccatttattactcgcccacccatccatccattctt i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 920335 20 + 5252280 ------------------catctgt-tcattcacaca--ct---------------------------------------------------------------------- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89985711 77 - 120129022 ----catgcatT-----GTGTCTATCCCATATATTCATGTTGatccatccatccattcatccattacca-----------------------tattcattctttcatcc-- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1664083 75 + 4416731 GCTCCTTGAACATG---CCATTCTT-TCTATTATTGG--ATCATTGAC-CCTCCATTCAGTCTTTC--------------------------CAGCCATTATATCATC--- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 82460 1134 + 287728 I e cebCap1.NW_016107827v1 1290611 546 + 1864846 I a score=426167.000000 s hg38.chr2_KI270774v1_alt 88604 56 + 223625 cacccacccatccatcca---ttcttcatccacccatc---tactcatctat-ccatccactg s panTro5.chr2A 1366201 56 + 111504155 cacccacccatccatcca---ttcttcatccacccatc---cactcatctat-ccatccaccg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1326291 56 + 114371477 cacccatccatccatcca---ttcttcatccacccatc---cactcatctat-ccatccaccg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1351353 56 + 1464242 cacccacccatccatcca---ttcttcatccacccatc---cactcatctat-ccatccaccg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1076831 53 + 81552678 -acccacccatccatcca---ttcttcatccacccatc---cattcatctat-ccatccac-- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1406989 55 + 108979918 -acccacccatccatccg---ttcatcatccacccatc---cattcatctat-ccatccaccc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1379395 56 - 111193037 cacccacccatccatccg---ttcatcatccacccatc---cattcatctat-ccatccaccc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1407826 56 + 3644372 cacccacccatccatccg---ttcatcatccacccatc---cattcatctat-ccatccaccc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1361562 59 - 10304083 cacccacccatcgaatggatattcgtcatccacccatc---cattcatctct-ccatccaccc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1436343 56 - 107702431 cacccacccatccatcca---ttcatcatccacccatc---cattcatctat-ccatccaccc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 915230 56 - 2200435 cacccacccatccatccg---ttcatcatccacccatc---cattcatctat-ccatccactc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1345181 56 - 13651311 cacccacccatccatcca---ttcgtcatcgacccatc---cattcatctat-ccatccaccc i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1352994 33 - 108792865 cacccatcaatccaccca---ttcatcatctaccca--------------------------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1202963 56 - 7082604 cacccatcaatccatcca---ttcttcatccacccatc---cattcatctat-ccatgcatcc i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1291157 56 + 1864846 cacccatcaatccaccca---ttcatcatccacccatc---cattcatctct-ccatgcattc i cebCap1.NW_016107827v1 I 546 C 0 s otoGar3.GL873658 920355 23 + 5252280 cacccacccatccatgca---ttcat------------------------------------- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89985788 56 - 120129022 catccaactattcaggtg---ctcattaatcatccatt---tatccatccac-tcacacaccc i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1664158 58 + 4416731 --CCCatccatccatcca---acgcacagacatttattgagtactaatatatggcatgcactg i dasNov3.JH576208 C 0 I 54 e aotNan1.NW_018513311v1 82460 1134 + 287728 I a score=95352.000000 s hg38.chr2_KI270774v1_alt 88660 14 + 223625 atcagtttctccat s panTro5.chr2A 1366257 14 + 111504155 atcagtttctccat i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1326347 14 + 114371477 atcagtttctccat i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1351409 14 + 1464242 atcagtttctccat i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1076884 12 + 81552678 --cagtttctccat i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1407044 14 + 108979918 atcaatttctccat i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1379451 14 - 111193037 atcaatttctccat i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1407882 14 + 3644372 atcaatttctccat i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1361621 14 - 10304083 atcaatttctccat i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1436399 14 - 107702431 atcaatttctccat i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 915286 14 - 2200435 atcaatttctccat i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1345237 14 - 13651311 atcaatttctccat i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1353027 5 - 108792865 ---------tccac i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1203019 14 - 7082604 gccaatttctccac i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1291213 14 + 1864846 accaatttctccac i cebCap1.NW_016107827v1 C 0 C 0 s mm10.chr12 89985844 2 - 120129022 at------------ i mm10.chr12 C 0 C 0 e aotNan1.NW_018513311v1 82460 1134 + 287728 I e otoGar3.GL873658 920378 0 + 5252280 C e dasNov3.JH576208 1664216 54 + 4416731 I a score=139772.000000 s hg38.chr2_KI270774v1_alt 88674 34 + 223625 ccatccatccattcacccattcatccatctatcc s panTro5.chr2A 1366271 14 + 111504155 ccatccatcc--------------------atcc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1326361 10 + 114371477 ccatcc------------------------atcc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1351423 34 + 1464242 ccatccatccatccacccattcatccatccatcc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1076896 30 + 81552678 ccatgcatccattcacccattcatcc----atcc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1407058 14 + 108979918 ccatctatcc--------------------accc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1379465 14 - 111193037 ccatctatcc--------------------accc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1407896 10 + 3644372 ccatctat------------------------cc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1361635 34 - 10304083 ccatctatccatacacccattcatccatctatcc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1436413 30 - 107702431 ccatctatccatacacccattcatcc----atct i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 915300 30 - 2200435 ccatctatccatacacccattcatcc----atct i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1345251 34 - 13651311 ccatctgtccatacacccattcatccatctatcc i colAng1.NW_012118821v1 C 0 M 308 s calJac3.chr14 1353032 30 - 108792865 ccgtccatccattcacccat----ccatccatct i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1203033 34 - 7082604 ccatccatccattcacccatccaaccatccatct i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1291227 34 + 1864846 ccatccatccattcacccatccatccatctttcc i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 83594 30 + 287728 CCATCCATCCATTCACCCGT----CCATCCATCT i aotNan1.NW_018513311v1 I 1134 C 0 s otoGar3.GL873658 920378 34 + 5252280 tcatgcattcatccacccacccatctgttcatcc i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89985846 34 - 120129022 ccatctgtccatcaatccatttgtttatccatcc i mm10.chr12 C 0 C 0 e dasNov3.JH576208 1664216 54 + 4416731 I a score=143724.000000 s hg38.chr2_KI270774v1_alt 88708 28 + 223625 accca-ccacctccccgcccatccatcca s panTro5.chr2A 1366285 28 + 111504155 accca-ccacctacccgcccatccatcca i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1326371 28 + 114371477 accca-ccacctacccgcccatccatcca i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1351457 27 + 1464242 g-cca-ccacctacccgcccatccatcca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1076926 29 + 81552678 acccacccacccacctgcccatccatcca i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1407072 17 + 108979918 ------------acccacccacccatcca i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1379479 17 - 111193037 ------------acccacccacccatcca i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1407906 17 + 3644372 ------------acccacccacccatcca i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1361669 17 - 10304083 ------------acccacccacccatcca i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1436443 17 - 107702431 ------------atccacccacccatcca i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 915330 17 - 2200435 ------------atccacccacctatcca i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1353062 29 - 108792865 atccTCCCTCTTACCTACTCACTCATCCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1203067 29 - 7082604 acccactcacccacccacccacccatcca i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1291261 29 + 1864846 acccactcacccacccacgcacccatcca i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 83624 29 + 287728 ATCCACCCACTTACCTCCTCACCCATCCA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 920412 28 + 5252280 accca-acacccacccccacatccatcca i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89985880 17 - 120129022 ------------actcacacaatcatcca i mm10.chr12 C 0 C 0 e dasNov3.JH576208 1664216 54 + 4416731 I e colAng1.NW_012118821v1 1345285 308 - 13651311 M a score=1172184.000000 s hg38.chr2_KI270774v1_alt 88736 123 + 223625 tAATCAGAACCCACCCCACTCTCCC--------AGATTTCT--TTCCACCCACCTTTTATCTCCCCCAGAACATTTCCTCATTATTTCAGCTTGTCAGGTGCCCTCTTCTGTTTTCTCACAGATTCACCCCCA s panTro5.chr2A 1366313 123 + 111504155 tAATCAGAACCCACCCCACTCTCCC--------AGATTTCT--TTCCACCCACCTTttatctcccccagaacatttcctcattatttcagcttgtcaggtgccctcttctgttttctcacagattcaccccca i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1326399 123 + 114371477 tAATCAGAACCCACCCCACTCTCCC--------AGATTTCT--TTCCACCCACCTTTTATCTCCCCCAGAACATTTCCTCATTATTTCAGCTTGTCAGGTGCCCTCTTCTGTTTACTCACAGATTCACCCCCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1351484 123 + 1464242 tAATCAGAACCCACCCCACTCTCCC--------AGATTTCT--TTCCACCCACCTTTTATCTCCCCCAGAACATTTCCTCATTATTTCAGCTTGTCAGGTGCCCTCTTCTGTTTTCTCACAGATTCACCCCCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1076955 118 + 81552678 tAATCAGAACCCCCC-----TTCCC--------AGATTTCT--TTGCACCCACCTTttatctcccccagaacatttcctcattatttcagcttgtcagttgccctcttctgtgttctcacagattcaccccca i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1407089 123 + 108979918 tAATCAGAACCCACCCCTCTCTCCC--------AGATTTCT--TTCCACCCACCTTttatctcccccagaacatttcatcattatttcagcttgtcaggtgccctcttctgtgttctctcagattcactccca i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1379496 123 - 111193037 tAATCAGAACTCACCCCTCTCTCCC--------AGATTTCT--TTCCACCCACCTTTTATCTCCCCCAGAACATTTCATCATTATTTCAGCTTGTCAGGTGCCCTCTTCTGTGTTCTCTCAGATTCACTCCCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1407923 123 + 3644372 tAATCAGAACCCACCCCTCTCTCCC--------AGATTTCT--TTCCACCCACCTTttatctcccccagaacatttcatcattatttcagcttgtcaggtgccctcttctgtgttctctcagattcactccca i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1361686 123 - 10304083 tAATCAGAACCCACCCCTCTCTCCC--------AGATTTCT--TTCCACCCACCTTttatctcccccagaacatttcatcattatttcagcttgtcaggtgccctcttctgtgttctctcagattcactcccg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1436460 123 - 107702431 tAATCAGAACCCACCCCTCTCTCCC--------AGATTTCT--TTCCACCCACCTTttatctcccccagaacatttcatcattatttcagcttgtcaggtgccctcttctgcgttctctcagattcactcccg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 915347 123 - 2200435 tAATCAGAACCCACCCCTCTCTCCC--------AGATTTCT--TTCCACCCACCTTttatctcccccagaacatttcatcattatttcagcttgtcaggtgccctcttctgtgttctctcagattcactcccg i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1353091 119 - 108792865 TAATCAGAACTCACCCCTCTTTCCC--------AGATTTCT--CTCCACCTACCTTTTATCTCCCCCAGAACATTTCCTCATTATGTCAGGTT----GTTGCTCTCTTTTGTGTTCTCACAGATTCACCTCCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1203096 122 - 7082604 TAATGGGAAATCACCTCTCTTTCCC--------AGATTTCT---TCCACCTGCCTTCCATCTCCCCCAGAACATTTCCTCATTATGTCAGGTTGTCAGTTGCCCTCTTTTGTGTTCTCACAGATTCGCCCCCA i saiBol1.JH378218 C 0 I 426 s cebCap1.NW_016107827v1 1291290 123 + 1864846 tAATCAGAACTCACCCCTCTTTCCC--------AGATTTCT--TTCCACCTACCTTCTATCTCCCCCAGCACATTTCCTCATTATGTCAAGTTGTCAGTTGCCCTCTTTTGTGTTCTCACAGATTCACCCCCA i cebCap1.NW_016107827v1 C 0 I 422 s aotNan1.NW_018513311v1 83653 122 + 287728 AAATCAGAACTTACCCCTCTTTCCC--------AGATTGCT--TTCCACCTACCTTTTATCTCCCCCAGAACATTTCCTCATTATGTCA-GTTGTCAGTTGCCCTCTTTTGTGTTCTCACAGATTCACCCCCA i aotNan1.NW_018513311v1 C 0 I 408 s otoGar3.GL873658 920440 110 + 5252280 tAA-----------CCCACTTTCCT---------GATTTCT--TTCCACTAACGCTCTATCCCCCCCTAAAGTTTTCCTCATCACAGCAGACATTTGCCCACCCTCTTCTGTGTCCACACAGATTCACCCCA- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89985897 97 - 120129022 ttg-----atcca-------tTGCC--------AGAATTCTTCTTCCTCCTTGCTGTTATCTC---------------TCATTGTGACAAGTAATCAGATAA-CTCCTCTCTGCTCCCACAGATTTACCTCCC i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1664270 130 + 4416731 ttaccagaaccttctcctttttccccatcttccagactgct--tcctactcacactttatttc-cctggaaaatttcctcaccatgtcgagtggttagttgctttcttctgtgttctcacacattcgtgtcca i dasNov3.JH576208 I 54 C 0 e colAng1.NW_012118821v1 1345285 308 - 13651311 M a score=124742.000000 s hg38.chr2_KI270774v1_alt 88859 13 + 223625 AGATTCTAATAGG s panTro5.chr2A 1366436 13 + 111504155 agattctaatagg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1326522 13 + 114371477 AGATTCTAATAGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1351607 13 + 1464242 AGATTCTAATAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1077073 13 + 81552678 cgattctaatagg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1407212 13 + 108979918 agattctaatagg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1379619 13 - 111193037 AGATTCTAATAGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1408046 13 + 3644372 agattctaatagg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1361809 13 - 10304083 agattctaatagg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1436583 13 - 107702431 agattctaatagg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 915470 13 - 2200435 agattctaatagg i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1353210 13 - 108792865 AGATTTTTGTGGG i calJac3.chr14 C 0 I 420 s saiBol1.JH378218 1203644 13 - 7082604 AGATTCTCATAGG i saiBol1.JH378218 I 426 C 0 s cebCap1.NW_016107827v1 1291835 13 + 1864846 AGATTCTCATAGG i cebCap1.NW_016107827v1 I 422 C 0 s aotNan1.NW_018513311v1 84183 13 + 287728 AGATTCTGATAGG i aotNan1.NW_018513311v1 I 408 C 0 s otoGar3.GL873658 920550 13 + 5252280 AGCTTCTAGCAGG i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89985994 11 - 120129022 --ATAATCCCAAG i mm10.chr12 C 0 I 1 s dasNov3.JH576208 1664400 13 + 4416731 ggatcctgactga i dasNov3.JH576208 C 0 C 0 e colAng1.NW_012118821v1 1345285 308 - 13651311 M a score=11153.000000 s hg38.chr2_KI270774v1_alt 88872 3 + 223625 GAA s panTro5.chr2A 1366449 3 + 111504155 gaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1326535 3 + 114371477 GAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1351620 3 + 1464242 GAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1077086 3 + 81552678 gaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1407225 3 + 108979918 aaa i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1379632 3 - 111193037 AAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1408059 3 + 3644372 aaa i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1361822 3 - 10304083 aaa i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1436596 3 - 107702431 aaa i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 915483 3 - 2200435 aaa i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1203657 3 - 7082604 GTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1291848 3 + 1864846 GTA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 84196 3 + 287728 GTA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 920563 3 + 5252280 GAC i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89986006 3 - 120129022 GGA i mm10.chr12 I 1 C 0 s dasNov3.JH576208 1664413 3 + 4416731 gac i dasNov3.JH576208 C 0 C 0 e calJac3.chr14 1353223 420 - 108792865 I e colAng1.NW_012118821v1 1345285 308 - 13651311 M a score=139148.000000 s hg38.chr2_KI270774v1_alt 88875 17 + 223625 TGTCTCCCACTCCACAG s panTro5.chr2A 1366452 17 + 111504155 tgtctcccactccacag i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1326538 17 + 114371477 TGTCTCCCACTCCACAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1351623 17 + 1464242 TGTCTCCCACTCCACAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1077089 17 + 81552678 tgtctcccactccacag i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1407228 17 + 108979918 tgtctcccacttcacag i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1379635 17 - 111193037 TGTCTCCCACTTCACAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1408062 17 + 3644372 tgtctcccacttcacag i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1361825 17 - 10304083 tgtctcccacttcacag i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1436599 17 - 107702431 tgtctcccacttcacag i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 915486 17 - 2200435 tgtctcccacttcacgg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1345593 17 - 13651311 TGTCTCCCACTTCACAG i colAng1.NW_012118821v1 M 308 C 0 s saiBol1.JH378218 1203660 17 - 7082604 TGTATCTCACTCCATGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1291851 17 + 1864846 TGTATCTCACTCCATAG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 84199 17 + 287728 TGTATCTCACGCCAAAG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 920566 12 + 5252280 CATGTCCCACTG----- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89986009 16 - 120129022 TACATCATAC-CCGCAG i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1664416 17 + 4416731 cctataatagtctacag i dasNov3.JH576208 C 0 C 0 e calJac3.chr14 1353223 420 - 108792865 I a score=3312516.000000 s hg38.chr2_KI270774v1_alt 88892 330 + 223625 AAATTAATTGCTTCTTTATCTTCCTAACTCAACTATAACTTTTACAAAGTTAGGAAGAACATCTTATTCATGTTCACACTTGTCAAGCACAGAACTTGACCCT-AAAGAAGTTCTCAGTAATTATTTGGTTTATTCA---------AAAAGAAATATGAGTCATTTATTTTACTT----AATAGAAGCAATATCCACTGGACGATATTCTAGA--TTAGGCTTC-------TTTTTAGACCTTTGT-GG-TTTTT-------------------TCTACAGTCACCACAATACAAT--------------------------------------------------------------CCCAAATC-AGCTAGAAAGAAAACACGCATCCTTTC--AAACTGTAATTTGGTCAAAACAACAT----TATTTCATTTTTAGTTT-- s panTro5.chr2A 1366469 330 + 111504155 aaattaattgcttctttatcttcctaactcaactataacttttacaaagttaggaagaacatcttattcatgttcacacttgtcaagcacagaacttgaccct-aaagaagttctcagtaattatttgGTTTATTCA---------AAAAGAAATATGAGTCAGTTATTTTACTT----AATATAAGGAATATCCACTGGACGATATTCTAGA--TTAGGCTTC-------TTTTTAGACCTTTGT-GG-TTTTT-------------------TCTGCAGTCACCACAATACAAT--------------------------------------------------------------CCCAAATC-AGCTAGAAAGAAAACACGCATCCTTTC--AAACTGTAATTTGGTCAAAACAACAT----TATTTCATTTTTAGTTT-- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1326555 330 + 114371477 AAATTAATTGCTTCTTTATCTTCCTAACTCAACTGTAACTTTTACAAAGTTAGGAAGAACATCTTATTCATGTTCACACTTGTCAAGCACAGAACTTGACCCT-AAAGAAGTTCTCAGTAATTATTTGGTTTATTCA---------AAAAGAAATATGAGTCAGTTATTTTACTT----AATATAAGCAATATCCACTGGACGATCGTCTAGA--TTAGGCTTC-------TTTTTAGACCTTTGT-GG-TTTTT-------------------TCTACAGTCACCACAATACAAT--------------------------------------------------------------CCCAAATC-AGCTAGAAAGAAAACACGCATCCTTTC--AAACTGTAATTTGGTCAAAACAACAT----TATTTCATTTTTAGTTT-- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1351640 330 + 1464242 AAATTAGTTGCTTCTTTATCTTCCTAACTCAACTAGAACTTTTACAAAGTTAGCACGAACATCTTATTCATGTTCACACTTGTCAAGCACAGAACTTCACCCT-AAAGAAGTTCTCAGTAATTATTTGGTTTATTCA---------AAAAGAAATATGAGTCATTTATTTTACTT----AATATAAGCAATATCCACTGGACGATATTCTAGA--TTAGGCTTC-------TTTTTAGTCCTTTGT-GG-TTTTT-------------------TCTACAGTCACCACAATACAAT--------------------------------------------------------------CCTAAATC-AGCTAGAAAGAAAACATGCATCCTTTC--AAACTGTAATTTGGTCATAACAACAT----TATTTCATTTTTAGTTT-- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1077106 332 + 81552678 aaatcagttgcttctttatcttcctaactcaactatagcttttacaaagttaggaagaacatcctattcatgttcgcacttgtcaagcacagaacttgaccct-aaaggagttctcagtaattatttgGCTTATTCA---------GAAAGAAATATGAGTCATTTATTTTACTT----AATATAAGCGATATCCACTGGACAATATTCTAGA--TTAGGCTTC-------TTTTTAGACCTTTGT-GGTTTTTT-------------------TCTATAATCCCCACAATACAAT--------------------------------------------------------------CCCCAATCTAGCTAGAAAGAAAACATGCATCCTTTC--AAACTGTAATTTGGTCAAAACAACAT----TATTTCATTTTTAGTTT-- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1407245 350 + 108979918 aaatcggttgcttctttatcttcctaactcaactataacttttatgaagttaggaagaacatcttattcatgttcacacttgtcaagcacagaacttgaccct-aaagaagttatcaataattatttgGTTTACTCA---------AAAAGAAATACGAGTCATTTATTTTTCTTAATCAATGTCAGAGATATCCACTGAACGATATTCTAGA--TTAGGCTTC-------TTTTTAGACCtttgt-gt-ttttttgtt----ttttgtttttttCTACAATCACCACAATACAAT--------------------------------------------------------------CCCAAATCTAGCTAGAAAGAAAACGTGCATCCTTTC--AAACTGTAATTTGGTCAAAACAACAT----TATTCCATTTTTAGTTT-- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1379652 354 - 111193037 AAATCGGTTGCTTCTTTATCTTCCTAACTCAACTATAACTTTTATGAAGTTAGGAAGAACATCTTATTCATGTTCACACTTGTCAAGCACAGAACTTGACCCT-AAAGAAGTTATCAATAATTATTTGGTTTACTCA---------AAAAGAAATACGAGTCATTTATTTTTCTTAATCAATGTAAGAGATATCCACTGAACGATATTCTAGA--TTAGGCTTC-------TTTTTAGACCtttgt-gt-ttttttgtttttttgttttttttttCTACAATCACCACAATACAAT--------------------------------------------------------------CCCAAATCTAGCTAGAAAGAAAACATGCATCCTTTC--AAACTGTAATTTGGTCAAAACAACAT----TATTCCATTTTTAGTTT-- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1408079 340 + 3644372 aaatcggttgcttctttatcttcctaactcaactataacttttatgaagttaggaagaacatcttattcatgttcacacttgtcaagcacagaacttgaccct-aaagaagttatcaataattatttgGTTTACTCA---------AAAAGAAATACGAGTCATTTATTTTTCTTAATCAATGTAAGAGATATCCACTGAACGATATTCTAGA--TTAGGCTTC-------TTTTTAGACCTTTGT-G---------------TGTTTTTTTTTTCTACAATCACCACAATACAAT--------------------------------------------------------------CCCAAATCCAGCTAGAAAGAAAACATGCATCCTTTC--AAACTGTAATTTGGTCAAAACAACAT----TATTCCATTTTTAGTTT-- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1361842 346 - 10304083 aaatcggttgcttctttatcttcctaactcaactataacttttatgaagttaggaagaacatcttattcatgttcacacttgtcaagcacagaacttgaccct-aaagaagttatcaataattatttgGTTTACTCA---------AAAAGAAATATGAGTCATTTATTTTTCTTAATCAATGTAAGAGATATCCACTGAACGATATTCTAGA--TTAGGCTTC-------TTTTTAGACCtttat-gt-ttttt--------tgttttttttttCTACAATCACCACAATACAAT--------------------------------------------------------------CCCAAATCTAGCTAGAAAGAAAACATGCATCCTTTC--AAACTGTAATTTGGTCAAAACAACAT----TATTCCATTTTTAGTTT-- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1436616 408 - 107702431 aaatcggttgcttctttatcttccttactcaactataacttttatgaagttaggaagaacatcttattcatgttcacacttgtcaagcacagaacttgaccct-aaagaagttatcaataattatttgGTTTACTCA---------AAAAGAAATACGAGTCATTTATTTTTCTTAATCAATGTAAGAGATATCCACTGAATGATATACTAGA--TTAGGCTTC-------TTTTTAGACCTTTGT-GT-TTTTT--------TGGTTTTTTTTCCTACAATCACCACAATACAACCCCAAATCTAGCTAGAAAGAAAACATGCATCCTTTCAAACTGTAATTTGGTCNNNNNNNNNNCCCAAATCTAGCTAGAAAGAAAACATGCATCCTTTC--AAACTGTAATTTGGTCAAAACAACAT----TATTCCATTTTTAGTTT-- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 915503 346 - 2200435 aaatcggttgcttctttatcttcctaactcaactataacttttatgaagttaggaagaacatcttattcatgttcacacttgtcaagcacagaacttgaccct-aaagaagttatcaataattatttgGTTTACTCA---------AAAAGAAATACGAGTCATTTATTTTTCTTAATCAATGTAAGAGATATCCACCGAACGATATTCTAGA--TTAGGCTTC-------TTTTTAGACCTTTGTGGt-ttttt--------tttttttttttCCTACAATCACCACAATACAAT--------------------------------------------------------------CCCAAATCTAGCTAGAAAGAAAACATGCATCCTTTC--AAACTGTAATTTGGT-AAAACAACAT----TATTCCATTTTTAGTTT-- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1345610 338 - 13651311 AAATCggttgcttctttatcttcctaactcaactataacttttacaaagttaggaagaatgtcttattcatgttcacacttgtcaagcacagaacttgaccct-aaagaagttctcaataattatttgGTTTACTCA---------AAAAGAAATACGAGTCATTTATTTATCTTAATCAATATAAGCGATATCCACTGGACGATATTCTAGA--TTAGGCTTC-------TTTTTAGACCTTTGT-GT-TTCTT----------------TTTTCTACAATCATCACAAAACAAT--------------------------------------------------------------CCCAAATCTAGCTAGAAAGAAAACGTGCATCCTTTC--AAACTGTAATTTGGTCAAAACAGCAT----TATTCCATTTTTAGTTT-- i colAng1.NW_012118821v1 C 0 I 510 s calJac3.chr14 1353643 341 - 108792865 AAGTCATTTGCTTCTTTATCTTCCTAACTCAAATACAAC-TTTATAAAGTCAGGAAGAACATCTCATTCATGTTCACCCTTGTCAAGCACAAAACTTGACCTT-AAAGAAGTTCTCAGTAATTATTTGGTTTATTCAAAAATAAATAAAAGAAATACGAGTCATTTATTTTACTTAATCAATATAAGCGATAGCCACTGCGCTATATT----A--TTAGGCTTC-------TTTTTAAACCTTTGT-GT-TGTTT----------------CATTTTTCCATCACCACGACACAAT--------------------------------------------------------------CCCAAATCTAGCTGGAAAGAAAACATGCATTCTTTC--CAACCGTGATTGG-TCAAAGCAACGT----TATTCCAGTGTTTGTTT-- i calJac3.chr14 I 420 C 0 s saiBol1.JH378218 1203677 341 - 7082604 AAGTCATTTGCTTCTTTATCTTCCTAACTCAACTACAAC-TTTATAAAGTGAGGAAGAACATCTGATTTGTGTTCACGCTTGTCAAGCACAGAACTTGACCCA-AAAGAAGTTCTCAGTAATTATTTGGTTTATTCAAAAAGAAATAAAAGAAATATGAGTCATTTATTTTACTTAATCGATATAAGCGATATCCACTGGGCTGTATT----A--TTAGGCTTC-------TTTTTAAACCTTTGT-AT-TGTTT----------------TATTTTTCCATCACCACAATACAAT--------------------------------------------------------------CCCAAATCTAGCTAGAAAGAAAACATGCATTCTTTC--AAACCATAATTGGTTCAAAACAGCAT----TATTCTATTG-CTGTTT-- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1291868 344 + 1864846 AAGTCATttgcttctttatcttcctaagtcaactacaac-tttataaagttaggaagaacatctgattcatgttcacgcttgccaagcacggaacttgatcca-aaagaagttctcagtaattatttgGTTTATACAAACAGAAATAAAAGAAATACAAGTCATTTATTTTACTTAATCAATATAAGCGATATCCACTGAGCTATATT----A--TTAGGTTTC-------TTTTTAAACCTTTGT-AT-TGTTT----------------TATTTTTCCATCACCGCAATGCAAT--------------------------------------------------------------CCCAAATCTAGCTAGAAAGAAAACATGCATTCTTTCATAAACCATAATTGGGTCAAAACAACAT----TATTCCATTGTTTGCTT-- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 84216 341 + 287728 AAGTCATTTGCTTCTTTATCTGCCTAACTCAACTGCAAC-TGTATAAAGTTAGGAAGAACATCTTATTCATGTTCACGCTTGTCAAGCACAGAACTTGACCCT-AAAGAAGTTCTCAGTAATTACTGGGTTTATTCAAAAAGAAATAAAAGAAATACGAGTCATTTATTTTCCTTAATCAATATGAGGGATATCCACTGGGCTGTATT----A--TCCGGCTTC-------TTTTTAAACCTTTGT-AT-TGTTT----------------TATTTTTCCATCACCACAATACAAT--------------------------------------------------------------CCCAAATCTAGCTAGAAAGAAAACATGCGTTCTTTC--CAA-CGTAATTGGGTCAGAACAACGT----TATTCCATTGTTTGCTG-- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 920578 316 + 5252280 ACATGGTCTGTCTTCCCACATGGATAATTGA----TAACTCCT-----GTAGGGGTGAGTGTCTTATTCATGCTCCTATCTGTGAAGCACAGAGCTCGGCCCT-GCAGTTAAACTCAACAATTATGT-GTGAATCCA---------AGAAGAATTACATGTCA-TTATTTTACTGAGATAGCATAAGAAATTTCAACTGGATTATGTTTTAAA--GTAGGTT---------TTCTTAGACATTTGT-AT-TTTTG---------------------TACTGTCCCCAAAATACAAT--------------------------------------------------------------TCCAAATCTAGTTGAAAAG-AGACAGGTGTCCTTTA--GAGTTGTAATTTGGCCAAACCAA-------TAGTTAATGTCTAGCTT-- i otoGar3.GL873658 C 0 I 6 s mm10.chr12 89986025 298 - 120129022 ----AAACTACTTATTTGTCCTCCCGACTGAAATATAACTTCTACAAAGAC-GTGAGTACACCTTAT--------ACACTTCCCAAATACAAATCTTATCCCT-AAAG------------------TGTTGTATGCG---------TA------------TCATTTATTCTGATGCATCAACCTAAGGAATTTCAACTGAG-----TTCTAAAAGCAGGGTTTA-------CTTACATACTTTTGT-GT-TCTTT------------TTTTCTTTTTGCTGTCACAATAGTATA----------------------------------------------------------------TCCAGGTCTACTTAGAAAGAGATTATGTAACCTTTC--AAACTGTAATTTCATCTAGACAATGTGGAGTATCTCATTTAGAGGTC-- i mm10.chr12 C 0 I 3 s dasNov3.JH576208 1664433 345 + 4416731 -aaatgattttcgaattgttttcctaaccaggctagacttttaataaacagggggagtacatcatattcatgttcatatctatcaggtacagaactcggtcctaaaagatgcattcaataattatttactgaatcca---------ggaataaatATATATCATTTATTTTAGTTCATCAATATTAAAAATTTGAACTGGATTGCATTCTAGA--TTAAGCCTTTGTGGGGTTTTTTGACCTTTGT-AT-TTTTT---------------------CATTCTCACCACAATACAAC--------------------------------------------------------------TTCAAATT-AGTCAGAAAGAGAACATGTATGCTCTC--AAACTATAATTTGGTCAAAGCGACATTAACTATTCAATTTTTAAAATTT i dasNov3.JH576208 C 0 C 0 a score=166090.000000 s hg38.chr2_KI270774v1_alt 89222 18 + 223625 TGTT--------TTGTTGTTTCCCTA s panTro5.chr2A 1366799 18 + 111504155 TGTT--------TTGTTGTTTCCCTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1326885 18 + 114371477 TGTT--------TTGTTGTTTCCCTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1351970 18 + 1464242 TGTT--------TTGTTGTTTCCCTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1077438 18 + 81552678 TGTT--------TTGTTGTTTCCCTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1407595 18 + 108979918 AGTT--------TTGTTGTTTCCCTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1380006 18 - 111193037 AGTT--------TTGTTGTTTCCCTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1408419 18 + 3644372 AGTT--------TTGTTGTTTCCCTA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1362188 18 - 10304083 AGTT--------TTGTTGTTTCCCTA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1437024 18 - 107702431 AGTT--------TTGTTGTTTCGCTA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 915849 18 - 2200435 AGTT--------TTGTTGTTTCCCTA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1353984 26 - 108792865 AATCTCCCTAAATTGTTGTTTCCCTA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1204018 15 - 7082604 AGTT-----------TTGTTTCCCTA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1292212 18 + 1864846 AGTT--------TTGTTGTTTCCCTA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 84557 18 + 287728 AGTT--------TTCTTGTTGCCCTA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 920900 18 + 5252280 TGTT--------TCATTGTTTCCCTA i otoGar3.GL873658 I 6 I 1296 s mm10.chr12 89986326 18 - 120129022 GCTT--------TCATTGCATTCCGG i mm10.chr12 I 3 C 0 s dasNov3.JH576208 1664778 15 + 4416731 ---T--------GTTCTGTTTCCCTA i dasNov3.JH576208 C 0 C 0 e colAng1.NW_012118821v1 1345948 510 - 13651311 I a score=1183197.000000 s hg38.chr2_KI270774v1_alt 89240 130 + 223625 AATTGATTGACTTGGCTGGTTCACCCTACTGTAACCTGTGTCTCTAATTCAACAGGA--ACGCACATTGCA-TCA-TTTTCTGGGGAAGCTC--AAT-GCCTGCAAGTTGGGAGCTGTTTAGTGATATTCACATCCT s panTro5.chr2A 1366817 130 + 111504155 AATTGATTGACTTGGCTGGTTCACCCTACTGTAACCTGTGTCTCTAATTCAACAGGA--ACACACACCGCA-TCA-TTTTCTGGGGAAGCTC--AAT-GCCTGCAAGTTGGGAGCTGTTTAGTGATATTCACATCCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1326903 130 + 114371477 AATTGATTGACTTGGCTGGTTCACCCTACTGTAACCTGTGTCTCTAATTCAACAGGA--ACGCACATTGCA-TCA-TTTTCTGGGGAAGCTC--AAT-GCCTGCAAGTTGGGAGCTGTTTAGTGATATTCACATCCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1351988 130 + 1464242 AATTGATTGACTTGGCTGGTTCACCCTACTGTAACCTGTGTCTCTAATTCAACAGGA--ATGCACATTGCA-TCA-TTTTCTGGGGAAGCTC--TAT-GCCTGCAAGTTGGGAGCTGTTTAGTGATATTCACATCCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1077456 127 + 81552678 AATTGACTGACTTGGCTAGTTCACCCTACTGTAACCTGTGTCTCTAATTCAACAGGA--ACGCACATTGCA-TCA----TCTGGGGAAACTC--TAT-GCCTGCAAGTTGGGAGCTATTTGGTGATATTCACATCCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1407613 130 + 108979918 AATGGATTGACTTGGCTGGTTTACCCTACTGTAACCTGTGTCTCTAATTGAACAGGA--ACGCCCATCGCA-TCA-TTTTCTGGGGAAACTC--TAT-GCTTGAAAGTCGGGAGCTATTTGGTGATATTCACATCCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1380024 130 - 111193037 AATGGATTGACTTGGCTGGTTTACCCTACTGTAACCTGTGTCTCTAATTGAACAGGA--ACGCCCATCGCA-TCA-TTTTCTGGGGAAACTC--TAT-GCTTGAAAGTCGGGAGCTATTTGGTGATATTCACATCCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1408437 130 + 3644372 AATGGATTGACTTGGCTGGTTTACCCTACTGTAACCTGTGTCTCTAATTGAACAGGA--ACGCCCATCGCA-TCA-TTTTCTGGGGAAACTC--TAT-GCTTGAAAGTCGGGAGCTATTTGGTGATATTCGCATCCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1362206 130 - 10304083 AATGGATTGACTTGGCTGGTTTACCCTACTGTAACCTGTGTCTCTAATTGAACAGGA--ACGCCCATCGCA-TCA-TTTTCTGGGGAAACTC--TAT-GCTTGAAAGTCGGGAGCTATTTGGTGATATTCACATCCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1437042 130 - 107702431 AATGGATTGACTTGGCTGGTTTACCCTACTGTAACCTGTGTCTCTAATTGAACAGGA--GCGCCCATCGCA-TCA-TTTTCTGGGGGAACTC--TAT-GCTTGAAAGTCGGGAGCTCTTTGGTGATATTCACATCCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 915867 130 - 2200435 AATGGATTGACTTGGCTGGTTTACCCTACTGTAACCTGTGTCTCTAATTGAACAGGA--ACGCCCATCGCA-TCA-TTTTCTGGGGAAACTC--TAT-GTTTGAAAGTCGGGAGCTATTTGGTGATATTCACATCCT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1354010 128 - 108792865 AATTGACTGAATTAGCTGGTTCGCCCTGTTGAAATCTCTGTCTCTAACTAAACAGGA--AAGCACGTTGCA-TCA-TTTCCTGGGGAAACTT--TGT-TCCTGCAGGTTGGGAGC-ATTTGGCAATATTCACAT-GG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1204033 128 - 7082604 AATTGATTGAATTAGCTAGTTCACCCTACTGTAATCCATGTCTCTAACTAAACAGGA--AAGCACATTGCA-TCA-TTTTCTGGAGAAAC----TGT-TCCTGCAGGTTGGGAGCTATTTGGCAATATTCACATCAT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1292230 128 + 1864846 AACTGATTGAATTAACTAGTTCACCCTACTGTAAACTATGTCTCTAACTAAACAGGA--AAGCACATTGCA-TCA-TTTTCTGGGGAAAC----TGT-TCCTGTAGGTTGGGAGCTATTTGGCAATATTCACATTGT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 84575 128 + 287728 GATTGACTGAATTAGCTACTTCGCCCTATTGTAATC--TGTCTCTAACTAAACAGGA--AAGCACATTGCA-TCG-TTTTCTGGGGAAACGT--CGT-TCCTGCAGGTTGGGAGCTATTTGGCAATATTCACATCGT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 922214 128 + 5252280 AATTGATTGATTTGCCTGTTTTGGCCTCGAGTAAGCTCTGCCTCTGACTGGACA-GA--GCACACACTTCAGCCC-TTTCCTGGGGGAGGTC--TGCAGCCTGCAAGTTGGATGCTGCTGGGTGATAT---CAGGCT i otoGar3.GL873658 I 1296 C 0 s mm10.chr12 89986344 132 - 120129022 AATTAATCTACTTGATGATTTTACCCCCCTGAAAGTTACTCTTCTAACTCAACAGAACCAAATGCATTCCT-GAT-TCCCCCAGAAAAAGGG--TAT-GCTTATAAGTCAGGGGATGTTTGGTGATAGTCAGATCTT i mm10.chr12 C 0 I 375 s dasNov3.JH576208 1664793 133 + 4416731 AATTGATCAAGTTGACTATTTTATGCACCCATAAGCTATGCCTCTAATTCAACAAGT--GCAAGCACCTCA-TCAGTTTTCTGGGGAAACTCTATAT-GCCTGCAAATCAGAAGCTATTTGGTTATATTCACATCCT i dasNov3.JH576208 C 0 C 0 e colAng1.NW_012118821v1 1345948 510 - 13651311 I a score=44243.000000 s hg38.chr2_KI270774v1_alt 89370 5 + 223625 CCTCT s panTro5.chr2A 1366947 5 + 111504155 CCTCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1327033 5 + 114371477 CCTCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1352118 5 + 1464242 CTTCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1077583 5 + 81552678 CCTCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1407743 5 + 108979918 CCTTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1380154 5 - 111193037 CCTTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1408567 5 + 3644372 CCTTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1362336 5 - 10304083 CCTTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1437172 5 - 107702431 CCTTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 915997 5 - 2200435 CCTTT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1354138 5 - 108792865 CCTCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1204161 5 - 7082604 CCTCT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1292358 5 + 1864846 CCTCT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 84703 5 + 287728 CCTCT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 922342 4 + 5252280 CCTC- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1664926 5 + 4416731 TCTCT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89986476 375 - 120129022 I e colAng1.NW_012118821v1 1345948 510 - 13651311 I a score=88656.000000 s hg38.chr2_KI270774v1_alt 89375 8 + 223625 AGAAATTA s panTro5.chr2A 1366952 8 + 111504155 AGAAATTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1327038 8 + 114371477 AGAAATTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1352123 8 + 1464242 AGAAATTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1077588 8 + 81552678 AGAAATTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1407748 8 + 108979918 AGAAATTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1380159 8 - 111193037 AGAAATTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1408572 8 + 3644372 AGAAATTA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1362341 8 - 10304083 ACAAATTA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1437177 8 - 107702431 AGAAATTA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 916002 8 - 2200435 AGAAATTA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1346458 8 - 13651311 agaaaTTA i colAng1.NW_012118821v1 I 510 C 0 s calJac3.chr14 1354143 8 - 108792865 AGAAAATA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1204166 8 - 7082604 AGAAAATA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1292363 8 + 1864846 AGAAAATA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 84708 8 + 287728 AGAAAACA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 922346 8 + 5252280 AGGGATTG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1664931 8 + 4416731 AGAAATTA i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89986476 375 - 120129022 I a score=5293651.000000 s hg38.chr2_KI270774v1_alt 89383 558 + 223625 CTTAAGTGTATTTACCGACCTTCACCACTCAGATTAGGGAAATCCACTTGGCAAGGGAAGCCATGCATTCTAATGTGTATAGATGCTAGGGCCTTTTATAGAAACTAACAATTTTGAACCTGATTGAAGTATTGGGCTTAAAAAAGTA--CCA-TT--TTTTAAAA--------------------TTTATTTTTCC---AGGGCACCTGTGTTACATTTTGTTATC-TTTTTGTGA----CTATTGTAAGACAC--AAAGAACTTAGCTTAGCCATCCTATTATC--CACGTGAATATTGTCCACTA------AC----CAGGTCCTTCTCTGCTTCCAGACATGGTCTGGCTTGGACCTGCCATGCCTGGCTTGCAGCCCCCATCACCCCTG-AGCAAGACACAGCCCTGGGCCTCTGAGATGCTCTTGCTGGCCATGGCTCTGCCTTGTGTTTTACAGAGCTCATCGGCCTGAGGGCATCTTCCTCTCTATTAATCTCACT-----------TAGGGTCACAACAT--GCT------GTGAAACA-AAGGACCAAATGCCATTCACAAT--AT-TACCC-------CTAGAAACTCCTT-CA--GGGACTGGAGTCATTTTCCTTTCAGTAATGTA s panTro5.chr2A 1366960 558 + 111504155 CTCAAGTGTATTTACCGACCTTCACCACTCAGATTAGGGAAATCCACTTGGCAAGGGAAGCCATGCATTCTAATGTGTATAGATGCTAGGGGCTTTTATAGAAACTAACAATTTTGAACCTGATTGAAGTATTGGGCTTAAAAAAGTA--CCA-TT--TTTTAAAA--------------------TTTATTTTTCC---AGGGCACCTGTGTTACATTTTGTTATC-TTTTTGTGA----CTATTGTAAGACAC--AAAGAACTTAGCTTAGCCATCCTATTATC--CACGTGAATATTGTCCACTA------AC----CAGGTCCTTCTCTGCTTCCAGACATGGTCTTGCTCGGACCTGCCATGCCTGGCTTGCAGCCCCCATCACCCCTG-AGCATGACACAGCCCTGGGCCTCTGAGATGCTCTTGCTGGCCATGGCTCTGCCTTGTGTTTTACAGAGCTCATCGGCCTGAGGGCATCTTCCTCTCTATTAATCTCACT-----------TAGGGTCACAACAC--GCT------GTGAAACA-AAGGACCAAATGCCATTCACAAT--AT-TACCC-------CTAGAAACTCCTT-CA--GGGACTGGTGTCATTTTCCTTTCAGTAATGTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1327046 558 + 114371477 CTCAAGTGTATTTACCGACCTTCACCACTCAGATTAGGGAAATCCACTTGGCAAGGGAAGCCATGCATTCTAATGTGTATAGATGCTAGGGCCTTTTATAGAAACTAACAATTTTGAACCTGATTGAAGTATTGGGCTTAAAAAAGTA--CCA-TT--TTTTAAAA--------------------TTTATTTTTCC---AGGGCACCTGTGTTACATTTTGTTATC-TTTTTGTGA----CTATTGTAAGACAC--AAAGAACTTAGCTTAGCCATCCTATTATC--CACGTGAATATTGTCCACTA------AC----CAGGTCCTTCTCTGCTTCCAGACATGGTCTTGCTTGGACCTGCCATGCCTGGCTTGCAGCCCCCATCACCCCTG-AGCATGACACAGCCCTGGGCCTCTGAGATGCTCTTGCTGGCCATGGCTCTGCCTTGTGTTTTACAGAGCTCATCGGCCTGAGGGCATCTTCCTCTCTATTAATCTCACT-----------TAGGGTCACAACAC--GCT------GTGAAACA-AAGGACCAAATGCCATTCACAAT--AT-TACCC-------CTAGAAACTCCTT-CA--GGGACTGGTGTCATTTTCCTTTCAGTAATGTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1352131 558 + 1464242 CTCAGGTGTATTTACCGACCTTCACCACTCAGATTAGGGAAATCCACTTGGCAAGGGAAGCCATGCATTCTAATGTGTATAGATGCTAGGGCCTTTTATAGAAACTAACAATTTTGAACCTGATTGAAGTATTGGGCTTAGAAAAGTA--CCA-TT--TTTTAAAA--------------------TTTATTTTTCC---AGGGCACCTGTGTTACATTTTGTTATC-TTTTTGTGA----CTATTGTAAGACAC--AAAGAACTTAGCTTAGCCATCCTATTATC--CACGTGAATATTGTCCGCTA------AC----CAGGTCCTTCTCTGCTTCCAGACATGGTCTGGCTTGGACCTGCCATGCCTGGCTTGCAGCCCCCATCACCTCTG-AGCAGGACACAGCCCTGGGCCTCTGAGATGCTCTTGCTGGCCATGGCTCTGCCTTGTGTTTTACAGAGCTCATCAGCCTGAGGGCATCTTCCTCTCTATTAATCTCACT-----------TAGGGTCACAACAC--GCT------GTGAAACA-AAGGACCAAATGCCATTCACAAT--AT-TACCC-------CTAGAAACTCCTT-CC--GGGACTGGAGTCATTTTCCTTTCAGTAGTGTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1077596 561 + 81552678 CCCAAGTGTATTTACCGACCTTCACCACTCAGATTAGGGAAATCCACTTGGTGAGGGAAGCCATGCAGTCTAATGTGTATAGATGCTAGGGCCTTTTATAGAAACTAACAATTTTAAACCTGATTGAAGTATTGGGCTTAGAAAAGTA--CCATTT--TTTTTAAA--------------------TTTATTTTTCC---AGGGCAACTGTGTTACATTTTGCTATC-TTTTTGTGA----CTATTGTAAGACAC--GAAGAACCTAGCTTAGCCATCCTATTATC--CACGTGAAATTGGTCCACTA------AC----CAGGTCCTTCTCTGCTTCCAGACATGGTCTGGCTTGGACCTAGCATGCCTGGCTTGCAGCCCCCGCCACCCCTG-AGCATGACACAGCCCTGGGTCTCTGAGGTGCTCTTGCTGGCCATGGCTCTGCCTTGTGTTTTATGGAGCTCATCAGCCTGAGGGCATCTTCCTCTCTATTAATCTCACT----------GTAGGGTCACAACAT--GCC------GTGAAACA-AAGGACCAACGGCCATTCACATT--AT-TACCC-------TTAGAAACTCCTTGCA--AGGGCTGGAGTCATTTTCCTTTCAGTAATGTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1407756 559 + 108979918 CTCAAGTGTATTTACCGACCTTCACCACTCAGATTAGGGAAATCCACTTGGTGAGGGAAGCCATGCATTCTAGTGTGTATAGACTCTAGGGCCTTTTATAGAAACTAACAATTTGGAACCTGATTGAAGTATTGGGCTTAGGACAGTA--CCA-TT--TTTTAAAA--------------------TTTATTTTTCC---AGGGCAACTGTGTTATGTTTTGCTACCTTTTTTGTGA----CTATTGTAAGACAC--AAAGAACTTAGCTTAGCCATCCTATTATC--CACATGAATAA-GTCCACTA------AC----GAGGTCCTTCTCTGCTTCCAGACATGGTCTGGCTTGGACCTGCTATGCCTGGCTTGCAGCCCCCATCACCCCTG-AGCATGACACAGCCCTGGGCCTCTGAGGCACTCTTGCTTGCCATGGCTCTGCCTTGTATTTTACAGAGCTCATCAGCCTGAGGGCATCTCCCTGTCTATTAATCCCACT----------GTAGTGTCCCAACAC--GC-------ATGAAACA-AAGGACCAAAGGCCATTCAGAAT--AT-TACCC-------CCAGAAACTCCCTGCA--AGGACCGGAGTCATTTTCCTTTCAGTAATGTG i rheMac8.chr13 C 0 I 85 s macFas5.chr13 1380167 559 - 111193037 CTCAAGTGTATTTACCGACCTTCACCACTCAGATTAGGGAAATCCACTTGGTGAGGGAAGCCATGCATTCTAGTGTGTATAGACTCTAGGGCCTTTTATAGAAACTAACAATTTGGAACCTGATTGAAGTATTGGGCTTAGGAGAGTA--CCA-TT--TTTTAAAA--------------------TTTATTTTTCC---AGGGCAACTGTGTTATGTTTTGCTACCTTTTTTGTGA----CTATTGTAAGACAC--AAAGAACTTAGCTTAGCCATCCTATTATC--CACATGAATAA-GTCCACTA------AC----GAGGTCCTTCTCTGCTTCCAGACATGGTCTGGCTTGGACCTGCTATGCCTGGCTTGCAGCCCCCATCACCCCTG-AGCATGACACAGCCCTGGGCCTCTGAGGCACTCTTGCTTGCCATGGCTCTGCCTTGTATTTTACAGAGCTCATCAGCCTGAGGGCATCTCCCTGTCTATTAATCCCACT----------GTAGTGTCCCAACAC--GC-------ATGAAACA-AAGGACCAAAGGCCATTCAGAAT--AT-TACCC-------CCAGAAACTCCCTGCA--AGGACCGGAGTCATTTTCCTTTCAGTAATGTG i macFas5.chr13 C 0 I 85 s macNem1.NW_012011978v1 1408580 559 + 3644372 CTCAAGTGTATTTACCGACCTTTACCACTCAGATTAGGGAAATCCACTTGGTGAGGGAAGCCGTGCATTCTAGTGTGTATAGACTCTAGGGCCTTTTATAGAAACTAACAATTTGGAACCTGATTGAAGTATTGGGCTTAGGAGAGTA--CCA-TT--TTTTAAAA--------------------TTTATTTTTCC---AGGGCAACTGTGTTATGTTTTGCTACCTTTTTTGTGA----CTATTGTAAGACAC--AAAGAACTTAGCTTAGCCATCCTATTATC--CACATGAATAA-GTCCACTA------AA----GAGGTCCTTCTCTGCTTCCAGACATGGTCTGGCTTGGACCTGCTATGCCTGGCTTGCAGCCCCCATCACCCCTG-AGCATGACACAGCCCTGGGCCTCTGAGGCACTCTTGCTTGCCATGGCTCTGCCTTGTATTTTACAGAGCTCATCAGCCTGAGGGCATCTCCCTGTCTATTAATCCCACT----------GTAGTGTCCCAACAC--GC-------ATGAAACA-AAGGACCAAAGGCCATTCAGAAT--AT-TACCC-------CCAGAAACTCCCTGCA--AGGACCGGAGTCATTTTCCTTTCAGTAATGTG i macNem1.NW_012011978v1 C 0 I 85 s cerAty1.NW_012000820v1 1362349 558 - 10304083 CTCAAGTGTA-TTACCTACCTTCACCACTCAGATTAGGGAAATCCACTTGGCGAGGGAAGCCATGCATTCTAGTGTGTATAGACTCTAGGGCCTTTTATAGAAACTAACAATTTGGAACCTGATTGAAGGATTGGGCTTAGGAGAGTA--CCA-TT--TTTTAAAA--------------------TTTATTTTTCC---AGGGCAACTGTGTTATGTTTTGCTACCTTTTTTGTGA----CTATTGTAAGACAC--AAAGAACTTAGCTTAGCCATCCTATCATC--CACATGAATAA-GTCCACTA------AC----CAGGTCCTTCTCTGCTTCCAGACATGGTCTGGCTTGGACCTGCTATGCCTGGCTTGCAGCCCCCATCACCCCTG-AGCATGACACAGCCCTGGGCCTCTGAGGCACTCTTGCTTGCCATGGCTCTGCCTTGTATTTTACAGAGCTCATCAGCCTGAGGGCATCTCCCTGTCTATTAATCCCACT----------GTAGTGTCCCAACAC--GC-------ATGAAACA-AAGGACCAAAGGCCATTCAGAAT--AT-TACCC-------CCAGAAACTCCTTGCA--AGGACTGGAGTCATTTTCCTTTCAGTAATGTG i cerAty1.NW_012000820v1 C 0 I 85 s chlSab2.chr14 1437185 558 - 107702431 CTCAAGTGTATTTACCGACCTTCACCACTCAGATTAGGGAAATCCACTTGGCGAGGGAAGCCATGCATTCTAGTGTGTGTAGACGCTAGGGCCTTTTATAGAAACTAACAATTTGGAACCTGATTGAAGTATTGGGCTTAGAAGAGTA--CCA-TT--TTTTAAAA--------------------TTTATTTTTCT---AGGGCAACTGTGTTATGTTTTGCTACC-TTTTTGTGA----CTATTGTAAGACAC--AAAGAACTTAGCTTAGCCATCCTATTATC--CACATGAATAA-GTCCACTA------AC----CAGGTCCTTCTCTGCTTCCAGATATGGTCTGGCTTGGACCTGCTATGCCTGGCTTGCAGCCCCCATCACCCCTG-AGCATGACACAGCCCTGGGCCTCTGAGGCACTCTTGCTTGCCATGGCTCTGCCTTGCATTTTACAGAGCTCATCAGCCTGAGGGCATCTCCCTGTCTATTAATCCCACT----------GTAGTGTCCCAACAC--GC-------ATGAAACA-AAGGACCAAAGGCCATTCAGAAT--AT-TACCC-------CGAGAAACTCCTTGCA--AGGACCAGAGTCATTTTCCTTTCAGTAATGTG i chlSab2.chr14 C 0 I 272 s manLeu1.NW_012103754v1 916010 558 - 2200435 CTCAAGTGTATTTACCGACCTTCACCACTCAGATTAGGGAAATCCACTTGGCGAGGGAAGCCATGCATTCTAGTGTGTATAGACTCTAGGGCCTTTTATAGAAACTAACAATTTGGAACCTGATTGAAGTATTGGGCTTAGGAGAGTA--CCA-TT--TTTTAAAA--------------------TTTATTTTTCC---AGGGCAACTGTGTTATGTTTTGCTACCTTTTTTGTGA----CTATTGTAAGACAC--AAAGAACTTAGCTTAGCCATCCTATTATC--CACATGAATAA-GTCCACTA------AC----CAGGTCCTTCTCTGCTTCCAGACATGGTCTGGCTTGGACCTGCTATGCCTGGCTTGCAGCCCCCATCACCCCTG-AGCATGACACAGCCCTGGGCCTCTGAGGCACTCTTGCTTGCCATGGCTCTGCCTTGTATTTTACAGAGCTCATCAGCCTGAGGGCATCTCCCTGTCTATTAATCCCACT----------GTAGTGTCCCAACAC--GC-------ATGAAACA-AAGGACCAAAGGCCATTCAGAAT--AT-TACCC-------CCAGAAACTCCTTGCA--AGGACC-GAGTCATTTTCCTTTCAGTAATGTG i manLeu1.NW_012103754v1 C 0 I 85 s colAng1.NW_012118821v1 1346466 563 - 13651311 CTCAAGTGTATTTACCAACTTTCACCACTCAGATTAGGGAAATTCACTTGGCGAGGGAAGCCATGCATTCTGGAGTGTATAGACGCTAGGGTCTTTTATAGAAACTAACAATTTGGAACCTGATTGAAGTACTGGGCTTCGAAAAGTA--CCA-TT--TTTTAAAA--------------------TTTATTTTTCC---AGGGCAACTGTGTTATGTTTTGCTATC-TTTCTGTGA----CTATTGTAAGACAC--AAAGAACTTAGCTTAGCCATCCTATTATC--CACGTGAATAATGTCCACTA------ACCAGGCAGGTCCTTCTCTGCTTCCAGACATGGTCTGGCTTGGACCTGCTATGCCTGACTTGCAGCCCCCATCACCCCTG-AGCATGACACAGCCCTGGGCCTCTGAGGCACTCTTGCTTGCCATGGCTCTGCCTTGTGTTTTACAGAGCTCATCAGCCTGAGGGCATCTCCCTGTCTATTAATCCCACT----------GTAGGGTCCCAACAC--GC-------ATGAAACA-AAGGACCAAAGGCCATTCGGAAT--AT-TACCC-------CCAGAAATGCCTTGCA--AGGACCGGAGTCATTTTCCTCTCAGTGATGTG i colAng1.NW_012118821v1 C 0 I 17 s calJac3.chr14 1354151 534 - 108792865 CCCAAGTGTGTTCACCGACCTTCACCACTCAGACTAGGGAACTCCACCTGGTGAGGGAAACCACGTATTCCAATGTGTGTAGATCCCACAGCTTTTTATAGAAACTGATAATTTTGAACCTAATTCAAGTATTGGGCTTAGAAAAGTA--CCA-TT--TTTAAAAAA------------------ACTTATTTTCCT---AGGGAAACTGTGTTACATTTTGCTATC-TTTGTGTGACAGCCTATTTTGAGATAC--AAAGAACTTAGCTTAGCAATCCTAGTATC--CACGTGGGTAATGTCCACCA------AC----CAGGTCCTTCTCTGCTTCCAGACGTGGTCTGGCTTGGGCCCGCCATGCCTGGCTGGCAGCCC-CGCCGCCCCTG-ATCATGACACGGCCCTGGGCCTGTGATGTGCTCTTGCTGG------------CTTGTGTTTTATAGAGCGCGTCAGCCTGAGGGCATCTTGCCGTCTGTGAATCTCACT----------GGAAGGTCAGAA--C--GCC------GTG--------------------ATCCAGAAT--A--CCCCCCAC----CCAGAGACCCAGCGCA--AGGACTAGAGTCATTTTCCTTTCAGTAACGTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1204174 560 - 7082604 CTCAAGTGTGTTTACCGACCTTCACCACTCAGATTAGGGAAATCCACCTAGTGAGGGAAACCGCATATTCTAATGTGTATAGATCCTACAGCTCTTTATAGAAACTAATAATTTTGAACCTAATTGAAGTATTGGGCTTAGAAAAATA--CCA-TT--TAAAAAAAA----------------------ATTTTCCT---AGGGAAATTGTGTTACATTTTGCTATC-TTTTCGTGACTGCCTATTTTGAGACAC--AAAGAACTTAGCTTAGCAATCCTCTGATC--CACGTGGGTGATGTCCACCG------GC----CAGGTCCTTCTCTACTTCCAGACGTGGTCTGGCTCGGACCTGCCATGCGTGGCTTGCAGCCC---CCGCCCC-G-ATCATGACACGGCCCTGGGCCTCTGAGGTGCTCTTGCTGG-----------CCTTGTGTTTTATAGAGCTCTTCAGCCTGAGGGCATCTTCCCGTCTATGAATCTCACTGAATCTCACGGGAGGGTCACAGCTC--GCT------GTGAAACA-AAGAGCCAAATGCTATTCAGAAT--AT-CCCCCCAC----CCAGAAGCCCAGTGCA--AGGACTGGAGTCATTTTCCTTTCAGTAATGTA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1292371 553 + 1864846 TCCAAGTGTGTTTACTGACCTTCACCACTCAGATTAGGGAAATCCACCTGGTGAGGGAAACCATGTATTCTAATGTGTATAGATCCTACAGTGTTTTATAGAAACTAATAATTTTGAACCTAATTGAAGTATTGGGCTTAGAAAAGTA--ACA-TT--TTAAAAAAA------------------TTTAATTTGCCT---AGGGAAACTGTGTTACAATTTGCTATC-TTTTTGTGACTGCCTGTTTTGAGACAC--AAAGAA-----CTTAGCAATCCTATTATC--CACATGGGTAATGTCCACCA------AC----CAGGTCCTTCTCTACTTCCAGGCGTGGTCTGGCTTGGACCTGCCATGCGTGGCTTGCAGCCC-TGCCGCCCCTG-ATCATGACACGGCCCTGGGCCTCTTATGTGCTCTTGCTGG-----------CCTTGTGTTTTATAGAGCTCGTCAGCCTGAGGGCATCTTCCCGTCTATAAATCTCACT----------GGAGGGTCACAACTC--GCT------GTGAAACA-AACAGCCAAATGCCATTCAGAAT--ATCCCCCCCAC----CCAGAAACCCAGTGCA--AGGACTGGAGTCATTTTCCTTTCAGTAACGTA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 84716 560 + 287728 CCCAAGTGTGTTTACCGACCTTCGCCACTCAGATCAGGGAAATCCACCTGGTGACGGAAACCATGTATTCTAATGTGTATAGATCCTACAGCTTTTTATAGAGACTAGTGATTTTGAACCTAATTGAAGTATTGGGCTTAGAAACGTA--CCA-TT--TTTAAAAAA-------------------TTTATTTTCCT---AGGGAAACTGTGTTACATTTTGCTATC-TTTTTGTGACTGCCTATTTTGAGACAC--AAAGAACTTAGCTTAGCAATCCTATTATC--CACGTGGGTAATGTCCACCA------AC----CAGGTCCTTCTCTACTTCCAGACGTGGTCTGGCTTGGACCTGCCATGCCTGGCTTGCAGCCC-CGCCGCCCCTG-AGCATGACACGGCCCTGGGCCTCTGATGTGCTCTTGCTGG-----------CCTTGTGTTTTATACAGCTCATCAGCCTGAGGGCATCTTCCCGTCTATGAATCTCACT----------GGAGGGTCACAACTC--TCT------GTGAAACA-AAGGGCCAAATGCCATTCAGAAT--AC-CCCCCCACCCCGCCAGAAACCCAGTGCA--AGGACTAGAGTCATTTTCCTTTCAGTAATATA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 922354 462 + 5252280 CCCA-GTGCCTTAATTGGCCTTCACCACTCAGACTGGAGAAATACACACGGTGAGAGAGGCGATGCGTTCCGACCTGTGGA---CCCACCGCCTCTCAT-GAAACCAGGGACTCTGAACCCAGCTGAAGTGCTGGGCTTCGTGACATA--ACA-TTTCTTTTAAAAT-TCCAATATATGTATTTCTTTTATTTTTCC---AAGA-AATTATGTTATGCATTCCTGTC-TTTTGGGGACTGCTGATTTTAACACAC-TCGAGGAGCCAGCTCAGCAAGGCTGCTGCC--CACCCCAGTGGTGTCTGCTGCTGCTCAC----CA----CTTCTCTGCCTTCAGACTTGACTCCGCCCAG--------------------AGCCCCAAGGGCCGCAA-TG-----------CTTGGACCTCTGAC-CGCTCCTGCTCG-------TCTCCCTTCTGT------------------------GCATC-------------ATCTCACA-----------GAGGGTCA----------------------------------------------AGT--GT-TGCTG-------TCATCAGC-CCTTGCT--AGGGCCAGCGTCACT---CCTTTGGTGGTG-- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89986851 557 - 120129022 CTCAGGTTCACTTAGTGCCCTTCCTTGTTCACATTCGAGAGGTGTTCTTGGTGA--GAAGCTCTGTGTGGCAGTGTGT---GGTTCCAGAACTATATCTAGCAACTAAAAATTCTGAGTCTGGCAGCAGTAAGGAGTGTAGGAATGCAGCCTA-TC--TTTCAAAAC-CCCAAACTGTT-------CCTATTTTTCCCTTAGACCAACTGTGTACTG--TGGTTTTC-TTTCCATGA-----------AAAGCATGTGAAGAACCTAGCTGAGC------ATTATC-ACACCTGC-CAATGTGTATTG------AT----CACAGACTTCCCAGCCTGTAGG---AATTTGGGCTGAAATCACCACTCCTGGCTTATAGCCTCCAGAAC--ATG-GGAAGAACAGCAAACTGAACTTTTGAC---CATCTGTTCATCATAGTCCTGCC-TGCATATTCTAGAGCTCAAGGACCTAGGGATATCTCACGTCCTGGT-ATCTCACA----------CCAGGGGATCAGCTT--CCTACAGTGTTGAGACGTGAAGATAGATTGGCCTTAATGCTTAAT-TGCCC-------CTAGCAACCTCTTGCAGCAGGA---AGGTCATTGGCCTTCTAGAAGTGAA i mm10.chr12 I 375 C 0 s dasNov3.JH576208 1664939 563 + 4416731 CTCAAATGCATTTATTGACCTTCACCATTCACATTAGAGAAATATAGTCTGTGAAGGAAGCTATGTATTCTAATGTGTATGGACTCCAGAGCCCTTTATATTGGCTAATAATTCTGAAACCAGCAAAAGTTTTGGGTCTAGTAACATA--ACA-TTTCTTTTAAAACTCCCAATATTTTTCT----TTTCTTTCTCT---AGGGAAACTGT---ATGTTTTACTTCCTCATTTAATATTGCCTATTTTAACATATGTGAAGAAGTTAACTCAACAGTACTATTATCTGTACCTGA-TAATACCTATCA------AA----CATATTCTTCTCTGTTTTCAGACATGAGTTGGCTTGAATTTATCATACCTCCTTTAGAGCACCCATGCTCCCTGAAGAATGTCAATGACACAGACATTTGA---------------------TCTACCCTTCAATTTCTAGAGCTTTCAAATGTGAGAGCTTTTTTCCATCTATT-ATCTTGTT----------ATATTGTAGCAACACTGAC-------GTGAAACA-GAGG--TAGGTGTTATTCTGCAT--GT-CACTCTT-----TTAGCAGCCTCTCTCA--CGGGCCAGAGTCATTTCTCTTTTAGGAATAGA i dasNov3.JH576208 C 0 C 0 a score=2995709.000000 s hg38.chr2_KI270774v1_alt 89941 329 + 223625 AATACAAGCTCCTGTTCTGCCATTAGCAAGTGGAAGGTGAAGAC--------------------------------------TATGGGAGAGGCCAAGGGT-TTGGAA----------TGAGATGAGCTTGCA------CCTTAGACAGGATGTTTCTCAAAGGAAGGAAGTA-CTTGTTTGGACCAGATC-ATTATTTGAAAGATCATCAGCCTG---GAGGGAACATGAGTATGTATTTAGTCCTCACCACACT--GTTTCATAAAT--GTATTATGTGCAGGACAATGAAAAATTTATTTTGCTGCAGG---TG--GAGGTTGAGAGGCAGACACAGGCACTGGA-------CATTGATGGAGAAGTGAGGGAAGGTGAGCAATGTAAGTATTGTGACTGC--A s panTro5.chr2A 1367518 330 + 111504155 AATACAAGCTCCTGTTCTGCCATTAGCAAGTGGAAGGTGAAGAC--------------------------------------TATGGGAGAGGCCAAGGGT-TTGGAA----------TGAGATGAGCTTGCA------CCTTAGACAGGATGTTTGTCAAAGGAAGGAAGTATCTTGTTTAGACCAGATC-ATTATTTGAAAGATCATCAGCCTG---GAGGGAACATGAGTATGTATTTAGTCCTCACCACACT--GTTTCATAAAT--GTATTATGTGCAGGACAATGAAAAACTTATTTTGCTGCAGG---TG--GAGGTTGAGAGGCAGACACAGGCACTGGA-------CATTGATGGAGAAGTGAGGGAAGGTGAGCAATGTAAGTATTGTGACTGC--A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1327604 330 + 114371477 AATACAAGCTCCTGTTCTGCCATTAGCAAGTGGAAGGTGAAGAC--------------------------------------TATGGGAGAGGCCAAGGGT-TTGGAA----------TGAGATGAGCTTGCA------CCTTAGACAGGATGTTTGTCAAAGGAAGGAAGTATCTTGTTTGGACCAGATC-ATTATTTGAAAGATCATCAGCCTG---GAGGGAACATGAGTATGTATTTAGTCCTCACCACACT--GTTTCATAAAT--GTATTATGTGCAGGACAATGAAAAACTTATTTTGCTGCAGG---TG--GAGGTTGAGAGGCAGGCACAGGCACTGGA-------CATTGATGGAGAAGTGAGGGAAGGTGAGCAATGTAAGTATTGTGACTGC--A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1352689 330 + 1464242 AATACAACCTCCTGTTCTGCCATTAGCAAGTGGAAGGTGAAGAC--------------------------------------TATGGGAGAGGCCAAGGGT-TTGGAA----------TGAGATGAGCTTGCA------CCTTAGACAGGATGTTTGTCAAAGGAAGGAAGTATCTTGTTTGGACCAGATC-ATTATCTGAAAGATAATCAGCCTG---GAGGGAACATGAGTATGTATTTAGTCCTCACCACACT--GTTTCGTAAAT--GTATTATGTGCAGGACAATGAAAAATTTATTTTGCTGCAGG---TG--GAGGTTGAGAGGCAGACACAGGCACTGGA-------CATTGATGGAGAAGTGAGGGAAGGTGAGCAATGTAAGTATTGTGACTGC--A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1078157 326 + 81552678 AATACAAGCTCCTGTTCTGCCATTAGCAAGTGGAAGGTGAAGAC--------------------------------------TATGGGAGAGGCCAAGAGT-TTGGAA----------TGAGATGAGCTTGCA------CCTAAGACAGGACGTTTGTCA----AAGGAAGTATCTTGTTTGGACCAGATC-ATTATTTGAAAGATCATCGGCCTG---GAGGGAACCTGAGAGTGTATTTAGTCCTCACCACACT--GTTTCATAAAT--GTATTACATGCAGGACAATGAAAAATTCATTTTGCTGCAGG---TG--GAGGTTGAGAGGCAGACACAGGCACTGGA-------CATTGATGGAGAAGTGAGGGAAGGTGAGCTATGTGAGTATGGTGACTGC--A i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1408400 329 + 108979918 AATACAAGCTCCTGTTCTGCCATTAGTGAGTGGAAGGTGAAGAC--------------------------------------TATGAGAGAGGCCAAGGGT-TCGGAA----------TGAGATGAACTTGCA------CCTTAGACAGGACCTTTTTCA----AAGGAAGTATCTTGTTTTGACCAGATC-ATTATTTGAAGGATCATCAGCCTGGGAGAAGGAACATGAGTGTGTATTTAGTCCTCACCACACG--GTTTCATAAAT--GTACTACGTGCAGGACAATGAAACATTCATTTGGCTGCAGG---TG--GAGGTTCAGAGGCAGACACAGGCACTGGA-------CATTGATGGAGAAGTGAGGGAAGGTGAGCTATGTGGCTATGGTAACTGC--A i rheMac8.chr13 I 85 C 0 s macFas5.chr13 1380811 329 - 111193037 AATACAAGCTCCTGTTCTGCCATTAGTGAGTGGAAGGTGAAGAC--------------------------------------TATGGGAGAGGCCAAGGGT-TCGGAA----------TGAGATGAACTTGCA------CCTTAGACAGGACCTTTTTCA----AAGGAAGTATCTTGTTTTGACCAGATC-ATTATTTGAAGGATCATCAGCCTGGGAGAAGGAACATGAGTGTGTATTTAGTCCTCACCACACG--GTTTCATAAAT--GTACTACGTGCAGGACAATGAAACATTCATTTGGCTGCAGG---TG--GAGGTTCAGAGGCAGACACAGGCACTGGA-------CATTGATGGAGAAGTGAGGGAAGGTGAGCTATGTGGCTATGGTAACTGC--A i macFas5.chr13 I 85 C 0 s macNem1.NW_012011978v1 1409224 329 + 3644372 AATACAAGCTCCTGTGCTGCCATTAGTGAGTGGAAGGTGAAGAC--------------------------------------TATGGGAGAGGCCAAGGGT-TCGGAA----------TGAGATGAACTTGCA------CCTTAGACAGGACCTTTTTCA----AAGGAAGTATCTTGTTTTGACCAGATC-ATTATTTGAAGGATCATCAGCCTGGGAGAAGGAACATGAGTGTGTATTTAGTCCTCACCACACG--GTTTCATAAAT--GTACTACGTGCAGGACAATGAAACATTCATTTGGCTGCAGG---TG--GAGGTTCAGAGGCAGACACAGGCACTGGA-------CATTGATGGAGAAGTGAGGGAAGGTGAGCTATGTGGCTATGGTAACTGC--A i macNem1.NW_012011978v1 I 85 C 0 s cerAty1.NW_012000820v1 1362992 329 - 10304083 AATACAAGCTCCTGTTCTGCCATTAGTGAGTGGAAGGTGAAGAC--------------------------------------TATGGGAGAGGCCAAGGGT-TCGGAA----------TGAGATGAACTTGCA------CCTTAGACAGGACATTTGTCA----AAGGAAGTATCTTGTTTTGACCAGATC-ATTATTTGAAGGATCATCAGCCTGGGAGAAGGAATATGAGTGTGTATTTAGTCCTCACCACACG--GTTTCATAAAT--GTACTACATGCAGGACAATGAAACATTCATTTGGCTGCAGG---TG--GAGGTTGAGAGGCAGACACAGGCACTGGA-------CATTGATGGAGAAGTGAGGGAAGGTGAGCTATGTGACTATGGTAACTGC--A i cerAty1.NW_012000820v1 I 85 C 0 s chlSab2.chr14 1438015 328 - 107702431 AATACAAGCTCCTGTTCTGCCATTAGTGAGTGGAAGGTGAAGAC--------------------------------------TACGGGAGAGGCCAAGGGT-TCGGAA----------TGAGATGAACTTGCA------CCTTAGACAGGACATTTGTCA----AAGGAAGTATCTTGTTTTGACCAGATC-ATTATTTGAAGGATCATCAGCCTGGGAGAGGGAACATGAGTGTGTATTTAGTCCTCACCACACG--GTTTCATAAAT--GTATTACGTGCAGGCCAATGAAACATTCATTTGGCTGCAGG---TG--GAGGTTGACAGGCAGACACAGGCACTGGA-------CTTTGATGGAGAAGTGAGGGAAGGTGA-CTATGTGGCTGTGGTAACTGC--A i chlSab2.chr14 I 272 C 0 s manLeu1.NW_012103754v1 916653 329 - 2200435 AATACAAGCTCCTGTTCTGCCATTAGTGAGTGGAAGGTGAAGAT--------------------------------------TATGGGAGAGGCCAAGGGT-TCAGAA----------TGAGATGAACTTGCA------CCTTAGACAGGACATTTGTCA----AAGGAAGTATCTTGTTTTGACCAGATC-ATTATTTGAAGGATCATCAGCCTGGGAGAAGGAACATGAGTGTGTATTTAGTCCTCACCACACG--GTTTCATAAAT--GTACTACGTGCAGGACAATGAAACATTCATTTGGCTACAGG---TG--GAGGTTGAGAGGCAGACACAGGCACTGGA-------CATTGATGGAGAAGTGAGGGAAGGTGAGCTATGTGGCTATGGTAACTGC--A i manLeu1.NW_012103754v1 I 85 C 0 s colAng1.NW_012118821v1 1347046 316 - 13651311 AATACGAGCTCCTGTTCTGCCATCAGCGAGTGGAAGGTGAAGAC--------------------------------------TATGGGAGAGGCCAAGGGT-TCGGAA----------TGAGATGAACTTGCA------CCTTAGACAGGACATTTGCCA----AAGGAAGTATCTTGTTTTGACCAGATC-ATTATTTGAAGGATCATCGGCCTG---GAAGGAACATGAGTGTGTATTTAGTCCTCACCATACG--ATTTCATAAAT--GTATTACGTGCAGGACAATGAAACATTCATTTGGCTGCAAG---TG--GAGGTTGAGAGGCAGACACAGGCACTGGA-------CATTGATGAAGAAGTGAG----------TTATGTGGCTATTGTAACTGC--A i colAng1.NW_012118821v1 I 17 C 0 s calJac3.chr14 1354685 328 - 108792865 AATACAGGCTCCCATTCTGCCGTCAGCAAGCGGAAGGTGAACAC--------------------------------------CAGGGG-AGAGGGCACGGT-TTGGAATGAGATGAGCTGAGATGAGCTTGCA------CCTT----AGGACATTTTTCA----AAGGAAACATCTTGTTTGGACCGGATC-GTTGCTGGGAAGGTCACAGGCCTG---CAGGGAGCACGAGCGTGTCTTCACTGCTCACCACGTG--GGTTCCTGAGT--GCCTCACGTGCAGGACAGTGAAAAATTCATTTCGCTGCAGA---TG--GAGGTTGAGAGGCAGACACGGGCACTGGG-------CATTGACGGAGAACTGAGGGAAGGTGGGCGA--TGGGTGCTGTGACTGC--- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1204734 328 - 7082604 AATATGAGCTTCCATTCTGCCGTTAGCAAGCGGAAGGTGAACAC--------------------------------------TGGGGT-GAGGCCAAGGGT-TTGGAAGGAGATGAGCTGAGATGAGCTTGCA------CCTT----AGGACATTTTTCA----AAGGAAGTGTCTTGTTTTGACCAGGTC-ATTACTGGAAAGACCACAGGCCTG---CAGGGACCGTGACTGCGTAGTTATTGTTCACCATGTG--GTTTCCGAAGT--GCATTGTGTGCAGGACAATGAAAAATTCATTTTGCTGCAGA---TG--GAGGTTGAGAGGAAGACACGGGCGCTGGC-------CACGGAGGGAGAACTGAGGGAAGGTGAGCGA--TGGGTGCTGTGACTGC--- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1292924 331 + 1864846 AATACAAGCTCCCATTCTGCCGTTAGCAAGTGGAAGGTGAACAC--------------------------------------TAGGGA-GAGGCCAAGGGT-TTGGAATAAGATGAGCTGAGATGAGCTTGCA------CGTT----AGGACATTTTTCA----AAGGAAGTATCTTGTTTTGACCAGATC-ATTAGTGGAAAGACCACAGGCCTG---CAGGGAACGTGAGTGTGTATTCACTCCTCACCACGTT--GTTTCCTAAGT--ACATTATGTGCAGGACAATGAAAAATTCATTTTGCTGCAGA---TG--GAGGTTGAGAGGCAGACACGGGCACTGGC-------CATTGATGGAGAACTGAGGGAAGGTGAGCGATGTGGGTGCTGTGACTTCA-- i cebCap1.NW_016107827v1 C 0 I 49 s aotNan1.NW_018513311v1 85276 331 + 287728 AGTACAAGCTCCCATTCTGCCGTTAGCAGGTGGAAGGTGAACAC--------------------------------------TAGGGGAGAGGCCAAGGGT-TTGGAATGAGATGAGCTGAGATGAGCTTGCA------CCTT----AGGACA-TTTTCA----AAGGAAGCATCTTGTTTTGACCAGATC-ATTACTGGAAAGATCACAGGCCTG---CAGGGAACATGAGTGTGTATTTACTCCTCACCGCATT--GTTTCCCGAGT--GCATTATGTGCAGGACAACGAAAAATCCATTTTGCTGCAGA---TG--GAGGTTGAGAGGCAGACACGGGCGCTGGA-------CACTGACGGAGAACTGAGGGAGGGTGAGCGATGTGGGTGCTGTGACTGC-C- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 922816 301 + 5252280 ---ACACACT-------TTCTATGAGCAGGTGGGGGGTGGTGACACATGTGTGGCCTTCCTCTGTCAGCGGGTATTATGGGATAAGGGGCAGGACTGGAGTCTTGGGG----------TGAGAGGGGCCTGCA-TGCACTGCTGGACAGGACGTTTG-------GAAGGAATGAATTGCCTAGGCCAGGCC-ATTGTTGGAAGCAGC-----CCTG---AAAGGCACA-------GGTCTTAGTCACCTCTCTACC--ATGTCTTAAAT--GTGCACTG----AGGCGATGGAA-ACTCCTTTTGCTGCCAG---CA--GAGACTGAGAGGCAG---------------------------TGGAGGAGTGAGGACAGGTG-------------------CTGC--A i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89987408 270 - 120129022 AGCCTGAGCTTCCTCTC------------------------AAT--------------------------------------TAAAGGAGGGAGTGTGGGT-CAGGAG-----------AGGAAGAGGATGTC--------------AGGACCTCT-TCA----AAGAAAGCAGACCACTTTGAGCAAGTCTGTCATTTGGAAGATCACAGACTTG---GAAGGAACATGAGTGAAT------TTGTCATCATGCC--ATTCAATCAGC--GCATGACCCTAGGGACAGCGGCAAATTCACTTTCCTATGAGCGTTG--GAAGTC-ATAGGCTGATACAGA-GGGAGA-------CACAGATAGGAAGGAGAGAGAA---GAGCAGTGCC----------------- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1665502 340 + 4416731 AATATGAGTAACCTTTCTCCTATTATGAAGTGGAAAGTGAAAAT--------------------------------------TGTCTGAGAGCCCTAGGGTTTTGAAA----------TGAGATAAGCTTGCATTGCATCACTAGTCAGGAAGATTTACA----AAGGAAGTAAATTATTTTGACCAAATC-ATCATTGAGAAGATCATAGACCTG---GAAGG------AGAGTTTATTTAGTCACCCCCACCCTCAATTTTATAAATACATATCAAGTATAGGACAATGAAAAATTTGCATTGTTACAGG---TGTTGAGATTGAGAGGCATACACTGGTCCTGAAGGGAAAGAATAGGTGATGGTATGAATGAAGATGTGAAGAGCATTTATTGGTGGTGC--A i dasNov3.JH576208 C 0 C 0 a score=404633.000000 s hg38.chr2_KI270774v1_alt 90270 47 + 223625 AGGGTTTGTAAGGAAAATATGGCAACACAGACATGCAGCCCTC---------AAGA s panTro5.chr2A 1367848 47 + 111504155 AGGGTTTGTAAGGAAAATACAGCAACACAGACATGCAGCCCTC---------AAGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1327934 47 + 114371477 AGGGTTTGTAAGGAAAATACGGCAACACAGACATGCAGCCCTC---------AAGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1353019 47 + 1464242 AGGGTTTGTAAGGAAAATATGGCAACACAGACATGCAGCCCTC---------AAGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1078483 47 + 81552678 GAGGTTTGTAAGGAAAATATGACAACACAGATGTGCAGCCCTC---------AAGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1408729 47 + 108979918 GAGGTTTGTAAGGAAAATATGGCAACACAGACCTGCAGCCCTC---------AAGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1381140 47 - 111193037 GAGGTTTGTAAGGAAAATACGGCAACACAGACCTGCAGCCCTC---------AAGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1409553 47 + 3644372 GAGGTTTGTAAGGAAAATATGGCAACACAGACCTGCAGCCCTC---------AAGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1363321 47 - 10304083 GAGGTTTGTAAGGAAAATATGGCAACACAGACCTGCAGCCCTC---------AAGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1438343 47 - 107702431 GAGGTTTGTAAGGAAAATACGGCAACACAGACCTGCAGCCCTC---------AAGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 916982 47 - 2200435 GAGGTTTGTAAGGAAAATATGGCAACACAGACCTGCAGCCCTC---------AAGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1347362 47 - 13651311 GAGGTTTGTACGGAAAATATGGCAACACAGACCTGCAGCCCTC---------AAGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1355013 47 - 108792865 AGGCCTCGTGGGGAAGACACGGCAACGCGGACGCACAGGCTTC---------AAGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1205062 47 - 7082604 AGGCCTCACGGGGCGGACACGGCAGCACAGACTCGCAGCCTTC---------AAGG i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 85607 46 + 287728 -GGCCTCGTGGGGACGATACGGCAACACAGACGCGCGGCCTTC---------AGGA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 923117 47 + 5252280 GGAGTTTGTGGAGAAAATGCGTCAGCACCTGTGCACAGCCTTC---------AGAG i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89987678 53 - 120129022 AGAGTTGGTAGGGAAAA---GCTAAAGCTCATGGGCAGCCTTCGGGCACATGATGA i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1665842 46 + 4416731 GCAGTTTGTA-GGAAGACACAGAAACATACAGGTATGACCTTC---------AGGA i dasNov3.JH576208 C 0 I 21 e cebCap1.NW_016107827v1 1293255 49 + 1864846 I a score=9914.000000 s hg38.chr2_KI270774v1_alt 90317 4 + 223625 CAAA s panTro5.chr2A 1367895 4 + 111504155 CAAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1327981 4 + 114371477 CAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1353066 4 + 1464242 CAAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1078530 4 + 81552678 CAAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1408776 4 + 108979918 CAAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1381187 4 - 111193037 CAAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1409600 4 + 3644372 CAAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1363368 4 - 10304083 CAAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1438390 4 - 107702431 CAAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 917029 4 - 2200435 CAAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1347409 4 - 13651311 CAAA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1355060 3 - 108792865 TGA- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1205109 3 - 7082604 TCA- i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 85653 3 + 287728 TAA- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 923164 4 + 5252280 TGAC i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89987731 4 - 120129022 TGAA i mm10.chr12 C 0 C 0 e cebCap1.NW_016107827v1 1293255 49 + 1864846 I e dasNov3.JH576208 1665888 21 + 4416731 I a score=72135.000000 s hg38.chr2_KI270774v1_alt 90321 7 + 223625 -CGTTTCC s panTro5.chr2A 1367899 7 + 111504155 -CATTTCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1327985 7 + 114371477 -CATTTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1353070 7 + 1464242 -CGTTTCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1078534 7 + 81552678 -CGTTTCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1408780 7 + 108979918 -CGTTTCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1381191 7 - 111193037 -CGTTTCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1409604 7 + 3644372 -CGTTTCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1363372 7 - 10304083 -CGTTTCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1438394 7 - 107702431 -CGTTTCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 917033 7 - 2200435 -TGTTTCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1347413 7 - 13651311 -CGTTTCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1355063 7 - 108792865 -CGTGTCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1205112 7 - 7082604 -CATGTCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1293304 7 + 1864846 -CGTGTCC i cebCap1.NW_016107827v1 I 49 C 0 s aotNan1.NW_018513311v1 85656 7 + 287728 -CGTGTCC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 923168 7 + 5252280 -TGTCTCC i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89987735 8 - 120129022 TGGTCTTC i mm10.chr12 C 0 C 0 e dasNov3.JH576208 1665888 21 + 4416731 I a score=108574.000000 s hg38.chr2_KI270774v1_alt 90328 9 + 223625 ACCGGGTTT s panTro5.chr2A 1367906 9 + 111504155 ACCGGGTTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1327992 9 + 114371477 ACCGGGTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1353077 9 + 1464242 ACCGGGTTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1078541 9 + 81552678 ACCGGGTTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1408787 9 + 108979918 ACCGGGTTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1381198 9 - 111193037 ACCGGGTTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1409611 9 + 3644372 ACCGGGTTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1363379 9 - 10304083 ACCGGGTTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1438401 9 - 107702431 ACTGGGTTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 917040 9 - 2200435 ACCGGGTTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1347420 9 - 13651311 ACCGGGTGT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1355070 9 - 108792865 ACCGGGTTT i calJac3.chr14 C 0 I 660 s saiBol1.JH378218 1205119 9 - 7082604 ACCGGGTTT i saiBol1.JH378218 C 0 I 2 s cebCap1.NW_016107827v1 1293311 9 + 1864846 ACCGGGTTT i cebCap1.NW_016107827v1 C 0 I 3 s aotNan1.NW_018513311v1 85663 9 + 287728 ACCGGGTTT i aotNan1.NW_018513311v1 C 0 I 3 s otoGar3.GL873658 923175 9 + 5252280 CCCGGATGT i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89987743 9 - 120129022 TCTGCACAT i mm10.chr12 C 0 I 3 s dasNov3.JH576208 1665909 9 + 4416731 ACTGGatat i dasNov3.JH576208 I 21 C 0 a score=2449017.000000 s hg38.chr2_KI270774v1_alt 90337 271 + 223625 ACCA---GTGGCTTTGATATCTGTTTATGTTAATATTGACAAATTGTATGTGTACTATTACTTTCCAAATACCCTTAGAAATACATTCAAGTCAGCAAAGTATCTTTCTAAATA-----------C--------C------------ACTT--TGTTCGTAAAGGAACTGAGATCTGTACCTGGGGAAAG-----TGCCAAAAC--CTGAAGTTTGTTACTGGCAGTTGTGGAATATTCTACTGGAACATTGAGAAAAGGGGTG-TGTTATGGGGCTTGTGGAGACAGCTGAAAACTGGTGAAACATTTTTC-AAA- s panTro5.chr2A 1367915 270 + 111504155 ACCA---GTGGCTTTGATTTCTGTTTGTGTTAATATTGACAAATCGTATGTGTACCATTACTTTCCAAATACCCTTAGAAATACATTCAAGTCAGCAAAGTATCTTTCTAAATA-----------C--------C------------ACTT--TGTTTGAGAAGGAACTGAGATCTGTACCTGGGGAAAG-----TGCCAAAAC--CTC--GTTTGTTACTGGCAGTTGTGGAATATTCTACTGAAACATTGAGAAAAGGGGTG-TGTTATGGGGCTTGTGGAGACAGCTGAAAACCGGTGAAACATTTTTCAAAA- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1328001 270 + 114371477 ACCA---GTGGCTTTGATTTCTGTTTGTGTTAATATTGACAAATCGTATGTGTACCATTACTTTCCAAATACCCTTAGAAATACATTCAAGTCAGCAAAGTATCTTTCTAAACA-----------C--------C------------ACTT--TGTTTGAGAAGGAACTGAGATCTGTACCTGGGGAAAG-----TGCCAAAAC--CTC--GTTTGTTACTGGCAGTTGTGGAATATTCTACTGAAACATTGAGAAAAGGGGTG-TGTTATGGGGCTTGTGGAGACAGCTGAAAACCGGTGAAACATTTTTCAAAA- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1353086 272 + 1464242 ACCA---GTGGCTTTGATTTCTGTTTATGTTAATATTGACAAATCGTATGTGTACCATTACTTTCCAAATACCCTTAGAAATACATTCAAGTCAGCAAAGTATCTTTCTAAATA-----------C--------C------------ACTT--TGTTCGAAAAGGAACTGAGATCTGTACCTGGGGAAAG-----TGCCAAAAC--CTCAAGTTTGTTACTGGCAGTTGTGGAATATTCTACTGGAACATTGAGAAAAGGGGTG-TGTTATGGGGCTTGTGGAGACAGCTGAAAACTGGTGAAACATTTTTCAAAA- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1078550 261 + 81552678 ACCGCCTGGGGCTTTGATT--TGTTTATGTTAATATTGACAAATCGTATGTGTACCATTACTTTCCAAATACCCTTAGAAATACATTCAAGTCAGCAAAGTATCTTTCTAAATA-----------C--------C------------ACTT--TGTTCGAAAAGGA------------ACCAGGGGGAAG-----TGCCAAAAC--CTCAAGCTCATTATTGGCAGTTGTGGAATAGTCTATTGGAACATTGAGAAAAGGTGTG-TGTTATGGGGCTTGTGGAGACAGCTGAAAACTGGTGAAACGTTTTTCAAAA- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1408796 274 + 108979918 ACCGCCTGGGGCTTTGATTTCTGTTTATGTTAATATTGACAAATCGTATGTGTACCATTACTTTCCAAATACCCTTAGAAATACAATCAAGTCAGCAAAGTATCTTCCTAAACA-----------C--------C------------ACTT--TGTTCGAAAATGACCTGAGAGCTGTACCTGGGGAAAG-----TGCCAAAAC--CTCAAGCTTGTTACTGGCAGTTGTGGAATATTCTATTGGAACGTTGAGAAAAGGTGTG-TGTTGTGGGGCTTGTGGAGACGGCTGAAAACTGATGAAATGTTTTTCAAA-- i rheMac8.chr13 C 0 I 12 s macFas5.chr13 1381207 274 - 111193037 ACCGCCTGGGGCTTTGATTTCTGTTTATGTTAATATTGACAAATCGTATGTGTACCATTACTTTCCAAATACCCTTAGAAATACAATCGAGTCAGCAAAGTATCTTCCTAAACA-----------C--------C------------ACTT--TGTTCGAAAATGACCTGAGAGCTGTACCTGGGGAAAG-----TGCCAAAAC--CTCAAGCTTGTTACTGGCAGTTGTGGAATGTTCTATTGGAACGTTGAGAAAAGGTGTG-TGTTGCGGGGCTTGTGGAGACGGCTGAAAACTGATGAAATGTTTTTCAAA-- i macFas5.chr13 C 0 I 1 s macNem1.NW_012011978v1 1409620 274 + 3644372 ACCGCCTGGGGCTTTGATTTCTGTTTATGTTAATATTGACAAATCGTATGTGTACCATTACTTTCCAAATACCCTTAGAAATACAATCGAGTCAGCAAAGTATCTTCCTAAACA-----------C--------T------------ACTT--TGTTCGAAACTGACCTGAGAGCTGTACCTGGGGAAAG-----TGCCAAAAC--CTCAAGCTTGTTACTGGCAGTTGTGGAATATTCTATTGGAACGTTGAGAAAAGGTGTG-TGTTGTGGGGCTTGTGGAGATGGCTGAAAACTGATGAAATGTTTTTCAAA-- i macNem1.NW_012011978v1 C 0 I 12 s cerAty1.NW_012000820v1 1363388 274 - 10304083 ACCGCCTGGGGCTTTGATTTCTGTTTATGTTAATATTGACAAATCGTATGTGTACCATTACTTTCCAAATACCCTTAGAAATACAATCAAGTCAGCAAAGTATCTTCCTAAACA-----------C--------C------------ACTT--TGTTCGAAAATGACCTGAGAGCTGTACCTGGGGAAAG-----TGCCAAAAC--CTCAAGCTTGTTACTGGCAGTTGTGGAATATTCTATTGGAATGTTGAGAAAAGGTGTG-TGTTGTGGGGCTTGTGGAGACGGCTGAAAACTGATGAAATGTTTTTCAAA-- i cerAty1.NW_012000820v1 C 0 I 12 s chlSab2.chr14 1438410 273 - 107702431 ACCGCCTGGGGCTTTGATTTCTGTTCATGTTAATATTGACAAATCGTATGTGTACCATGACTTTCCAAATACCCTTAGAAATACAATCAAGTCAGCAAAGTGTCTTCCTAAACA-----------C--------C------------ACTT--TGTTCG-AAATGACCTGAGAGCTGTACCTGGGGAAAG-----TGCCAAAAC--CTCAAGCTGGTTACTGGCAGTTGTGGAATATTCTATGGGAACGTTGAGAAAAGATGTG-TGTTGTGGGGCTTGTGGAGACGGCTGAAAACTGATGAAATGTTTTTCAAA-- i chlSab2.chr14 C 0 I 59 s manLeu1.NW_012103754v1 917049 274 - 2200435 ACCGCCTGGGGCTTTGATTTCTGTTTATGTTAATATTGACAAATCGTATGTGTACCATTACTTTCCAAATACCCTTAGAAATACAATCAAGTCAGCAAAGTATCTTCCTAAACA-----------C--------C------------ACTT--TGTTCGAAAATGACCTGAGAGCTGTACCTGGGGAAAG-----TGCCAAAAC--CTCAAGCTTGTTACTGGCAGTTGTGGAATATTCTATTGGAATGTTGCGAAAAGGTGTG-TGTTGTGGGGCTTGTGGACACGGCTGAAAACTGATGAAATGTTTTTCAAA-- i manLeu1.NW_012103754v1 C 0 I 12 s colAng1.NW_012118821v1 1347429 261 - 13651311 ACCGCCTGGGGCTTTGATTTCTGTTTATGTTAATATTGACAAGTCATATGTGTACCATTACTTTCCAAATACCCTTAGAAATACAATCAAGTCAGCAAAGTATCTTCCTAAACA-----------C--------C------------ATTT--TGTTCGAAAATG-------------ACCTGGGGAAAG-----TGCCAAAAC--CTCAAGCTCGTTACTGGCAGTTGTGGAATATTCTATTGGAACGTTGAGAAAAGGTGTG-TGTTGTGGGGCTTGTGGAGATGGCTGAAAACTGATGAAACATTTTTCAAA-- i colAng1.NW_012118821v1 C 0 I 1 s calJac3.chr14 1355739 269 - 108792865 ---ATCCGGGGCTTTCGTTTCCGCTGATGTGAATATGGACGAATCGTACGTGTGCCGTGACCTTCCAAATACCCTGAGAAATACACTCAAGTCAGCAAAGCATCTT-CCAAACA-----------C--------C------------ACTG--AGTTCAGAAACGAACCGAGACCTGTACCCGAGGAACG-----TGCT-GAAC--CTCGTGCTCGTTACTGGCGACTGCGGCATGTTCCATCAGAACGCTGAGCAAACCCGTG-AGTTCCGGGGCCTGCGGAGGCAGCTGAGAACTGAGGAACCGTTTTCCAAA-- i calJac3.chr14 I 660 I 1 s saiBol1.JH378218 1205130 271 - 7082604 ---GTCTGGGGCTTTCGTTTCTGCTTATGTTCATATTGACGAATCGTATGTGTACTGTGACTTTCCAAGTACCCTTAGAAATACACTGAGGTCAGCAAAGCATCTTACCAGATA-----------C--------C------------ACGT--AGTTCGAAAATGAACCGAGACCTGTACCTGAGGAAAG-----TGCTGGAAC--CTCATTCTCGTTACTGGCCGGTGTAGAATATTCTGTCAGAACATTGAGTAAACCTGTG-TGCTGTGGGGCTGGTGGAGACAGCTGAAAACTGATGAATCATTTTTCAAA-- i saiBol1.JH378218 I 2 I 1 s cebCap1.NW_016107827v1 1293323 254 + 1864846 ---GTCTGGGGCTTTCGTTTCTGCTTGTGTTAATATTGATGAAT-----GTGGACCATGACTTTCC------------AAATACACTCAAGTCAGCAAAGCATCTTTCCAAACA-----------C--------C------------ACTT--AGTTTGAAAATGAACCGAGACCTGTACCTGAGGAAAG-----TGCTAGAAC--CTCATGCTCGTTACTGGCGATTGTGGAATATTCTATCAGAACATTGAGTAAACCTGTG-TGTTATGGGGCTCGTGGAGACAGCTGAAAACTGAGGAATCATTTTTCAAA-- i cebCap1.NW_016107827v1 I 3 I 1 s aotNan1.NW_018513311v1 85675 271 + 287728 ---GTCTGGGGCTTTCGTTTCTGCTTATGTTAATATTGACGAATCGTGTGTGTACCGTGACTTTCCAAATACCCTTAGAAATACACTCAGGCCAGCAGAGCATCTTTCCAAACA-----------C--------C------------ACTT--AGTTCGAAAATGAACTGAGACCTGTACCTGAGGAAGG-----TGCTAGAAC--CTCACGCTCGTTCCTGGTGATTCTGGAATATTCTGTCAGAACATGGAGTAAGCCTGTG-CGTTACGGGGCTTGTGGAGACAGCGGAAAACCGAGGAATCATTTTTCAGA-- i aotNan1.NW_018513311v1 I 3 I 1 s otoGar3.GL873658 923184 263 + 5252280 -CCCACGGGGGCTTTAACCTCTGTACATGTTCATTGTAACAGGTCCTGTGTGTGCCG-----------GTGTCCTACGAAACAGGCCCGTGTC-GCAAAATGCCTTCACAAGCAGCCACAGTCTCA--------C------------ACTT--AGTCCCAGAGGGAG-TGAGATCTGTACCTGGGGGAAG-----TGCCAAGAA--GCCA-GCTCATGACCTGGGATTGCAGA---TTTTATCTGAG----GATGAGACAGGCGCTCCTGTGGGGTTTTCAG-GCTGAGTGGAAACGGGCTGGGAACTTTTCAAA-- i otoGar3.GL873658 C 0 I 1 s mm10.chr12 89987755 241 - 120129022 ---CCCAGGGGCTTTAATTCAT-TCTGTGCTAACACTGATGAGCCGTGAG-GCACCATT-CACTCCCCATGCCCTTAGAAAGGTTGTAGCGGCAGCAAAGCACCTTGCCATCCA-----------CGGGATGCTC------------ACCTGAAGCTC---ATGGCACTGAGGTGTAGATCTGGGA-------------------------------CACTGGTAGT-------GATTTTATCCAGACATCAAGATGAAGTGC--TGTTCCAGGGCTCTCAGACACAA--GAAAATTAATTGAATGCTGTGTGGA-- i mm10.chr12 I 3 I 1 s dasNov3.JH576208 1665918 287 + 4416731 --atttttttattttaatttctatttttGTTAATAGTGAAAAATCATATATGTAAAATTACTCTCAAAATATCTTTAGAGAGATGTTTAAGTCAACCAAGTGCATTTCCAAATT-----------C--------CAAGAATCCTCATATTT--AGTCTTAATTCTAACTGAGATCTATGCATGGGGGAAGGAGACTGAAAAAACAGTCCACATTAGGTA----AAGTTATGGAATACTTTATCTGAACATGGAAAAAAATTGCA-TATCCTGGGACTT-TAAAAACAACTGAAAATCAATTGGATACTTTTCAAA-A i dasNov3.JH576208 C 0 C 0 a score=48523.000000 s hg38.chr2_KI270774v1_alt 90608 10 + 223625 GTGCATCTCT s panTro5.chr2A 1368185 10 + 111504155 GCGCATCTCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1328271 10 + 114371477 GCGCATCTCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1353358 10 + 1464242 GCGCATCTCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1078811 10 + 81552678 GCACATCTCT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1381482 10 - 111193037 GCTCAGCCCT i macFas5.chr13 I 1 I 1 s colAng1.NW_012118821v1 1347691 10 - 13651311 GCGCAGCCCA i colAng1.NW_012118821v1 I 1 I 1 s calJac3.chr14 1356009 10 - 108792865 GTGCGGCTCT i calJac3.chr14 I 1 I 1 s saiBol1.JH378218 1205402 10 - 7082604 GTGCAGCTCC i saiBol1.JH378218 I 1 I 1 s cebCap1.NW_016107827v1 1293578 10 + 1864846 GTGCAGCTCT i cebCap1.NW_016107827v1 I 1 I 1 s aotNan1.NW_018513311v1 85947 10 + 287728 GTGCAGCTCT i aotNan1.NW_018513311v1 I 1 I 1 s otoGar3.GL873658 923448 10 + 5252280 GTGCAGCTCC i otoGar3.GL873658 I 1 I 1 s mm10.chr12 89987997 10 - 120129022 ATGCAGCCCC i mm10.chr12 I 1 C 0 s dasNov3.JH576208 1666205 10 + 4416731 GTGCAATTGT i dasNov3.JH576208 C 0 C 0 e manLeu1.NW_012103754v1 917323 12 - 2200435 I e chlSab2.chr14 1438683 59 - 107702431 I e cerAty1.NW_012000820v1 1363662 12 - 10304083 I e macNem1.NW_012011978v1 1409894 12 + 3644372 I e rheMac8.chr13 1409070 12 + 108979918 I a score=561833.000000 s hg38.chr2_KI270774v1_alt 90618 62 + 223625 GAATTGTTTCT-CGAATTGACCAAGCAGATGT-G-TCCTTTGTG-TAGTTGTCAATCTAACAAAAG s panTro5.chr2A 1368195 62 + 111504155 GAATTGTTTCT-CAAATTGACCAAGCAGATGT-G-TCCTTTGTG-TATTTGTCAATCTAACAAAAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1328281 62 + 114371477 GAATTGTTTCT-CAAATTGACCAAGCAGATGT-G-TCCTTTGTG-TATTTGTCAATCTAACAAAAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1353368 62 + 1464242 GAATTGTTTCT-CGAATTGACCAAGCAGATGT-G-TCCTTTGTG-TATTTGTCAATCTAACAAAAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1078821 61 + 81552678 GAATTGTTTC--CAAATTGACCAAGCAGATGG-G-TCCTTTGTG-TATTTGTCAATTTAACAAAAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1409082 61 + 108979918 GAATTGTTTCT-CAAATCGACCAAGC-GACAG-G-TCCTCTGTG-CATTTGTCAGTTTAGCAAAAG i rheMac8.chr13 I 12 C 0 s macFas5.chr13 1381493 61 - 111193037 GAATTGTTTCT-CAAATCGACCAAGC-GACAG-G-TCCTCTGTG-CATTTGTCAGTTTAGCAAAAG i macFas5.chr13 I 1 C 0 s macNem1.NW_012011978v1 1409906 61 + 3644372 GAATTGTTTCT-CAAATCGACCAAGC-GACAG-G-TCCTCTGTG-CATTTGTCAGTTTAGCAAAAG i macNem1.NW_012011978v1 I 12 C 0 s cerAty1.NW_012000820v1 1363674 61 - 10304083 GAATTGTTTCC-CAAATCGACCAAGT-GACAG-G-TCCTCTGTG-CATTTGTCAGTTTAGCAAAAG i cerAty1.NW_012000820v1 I 12 C 0 s manLeu1.NW_012103754v1 917335 61 - 2200435 GAATTGTTTCT-CAAATCGACCAAGC-GACAG-G-TCCTCTGTG-CATTTGTCAGTTTAGCAAAAG i manLeu1.NW_012103754v1 I 12 C 0 s colAng1.NW_012118821v1 1347702 62 - 13651311 GAATTGTTTCT-CAAATCGACCAAGCGGACGG-G-TCCTCTGTG-CATTTGTCAGTTTAGCAAAAG i colAng1.NW_012118821v1 I 1 C 0 s calJac3.chr14 1356020 61 - 108792865 GAATTGTTTCT-CACATTGACCAAGCCG-TGG-C-TCCTTTGTG-TATGTGTCACTTTAACAAAAG i calJac3.chr14 I 1 C 0 s saiBol1.JH378218 1205413 62 - 7082604 GAATTGTTTCT-CAGATTGACCAAGCAGATGG-G-TCCTTTGTA-TATCTGTCAATTTAACAAAAG i saiBol1.JH378218 I 1 C 0 s cebCap1.NW_016107827v1 1293589 62 + 1864846 GAGTTGTTTCT-CAGATTGATCAAGCAGATGG-G-TCCTTTGTG-TATTTGTTAATTTAACAAAAG i cebCap1.NW_016107827v1 I 1 C 0 s aotNan1.NW_018513311v1 85958 62 + 287728 GAATTGCTTCT-CCGATTGACCAAGCAGATGG-G-TCCTTTGTG-TATTTGTCACTTTTACAGAAG i aotNan1.NW_018513311v1 I 1 C 0 s otoGar3.GL873658 923459 64 + 5252280 GAATTGTTCCTACAAACTGACCAAGCAGGTGGTT-TTCTTTGTG-TATTTGTCTTTTTAACAAAAG i otoGar3.GL873658 I 1 C 0 s mm10.chr12 89988007 58 - 120129022 -CTTAGTTTTT-ACAACCAACTGAGC----AG-G-ACCTTGACATTATTTGTCACCGTAAGAAAAG i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1666215 64 + 4416731 GAATTGCTTTTACAGACTGACCAAATAGATAG-GCTCCTTTATG-CATTTGTTATTTTAACAAAAC i dasNov3.JH576208 C 0 C 0 e chlSab2.chr14 1438683 59 - 107702431 I a score=309522.000000 s hg38.chr2_KI270774v1_alt 90680 27 + 223625 CCAAATGTTTCATTTTCTTTCTTTTTA s panTro5.chr2A 1368257 27 + 111504155 CCAAATGTTTCATTTTCTTTCTTTTTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1328343 27 + 114371477 CCAAATGTTTCATTTTCTTTCTTTTTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1353430 27 + 1464242 CCAAATGTTTCATTTTCTTTCTTTTTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1078882 27 + 81552678 CCAAATGTTTCATTTTCTCTCTTTTTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1409143 27 + 108979918 CCAAATGCTTCATTTTCTTTCTTTTTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1381554 27 - 111193037 CCAAATGCTTCATTTTCTTTCTTTTTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1409967 27 + 3644372 CCAAATGCTTCATTTTCTTTCTTTTTA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1363735 27 - 10304083 CCAAATGCTTCATTTTCTTTCTTTTTA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1438742 27 - 107702431 CCAAATGCTTCATTTTCTTTCTTTTCA i chlSab2.chr14 I 59 C 0 s manLeu1.NW_012103754v1 917396 27 - 2200435 CCAAATGCTTCATTTTCTTTCTTTTTA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1347764 27 - 13651311 CCAAATGCTTCATTTTCTTTCTTTTTA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1356081 27 - 108792865 CCAGATGTTTCGTTTTATTTCTCTTTA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1205475 27 - 7082604 CCAAATGTTTCATTTTATTTCTTTTTA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1293651 27 + 1864846 CCAAAGGTTTCATTTTATTTCTTTTTA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 86020 27 + 287728 CCAAAGGTTTCGTTTTATTTCTTTTTA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 923523 23 + 5252280 -CAGAAAT---GTTATATTTATTTTTA i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89988065 26 - 120129022 -CCACTGTCTTATTTTCTTTCTTTTTA i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1666279 25 + 4416731 Caaaatattta--tttatttattttCA i dasNov3.JH576208 C 0 I 1113 a score=13073.000000 s hg38.chr2_KI270774v1_alt 90707 1 + 223625 G s panTro5.chr2A 1368284 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1328370 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1353457 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1078909 1 + 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1409170 1 + 108979918 G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1381581 1 - 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1409994 1 + 3644372 G i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1363762 1 - 10304083 G i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1438769 1 - 107702431 G i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 917423 1 - 2200435 G i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1347791 1 - 13651311 G i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1356108 1 - 108792865 G i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1205502 1 - 7082604 G i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1293678 1 + 1864846 G i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 86047 1 + 287728 G i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 923546 1 + 5252280 G i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89988091 1 - 120129022 A i mm10.chr12 C 0 C 0 e dasNov3.JH576208 1666304 1113 + 4416731 I a score=1654188.000000 s hg38.chr2_KI270774v1_alt 90708 151 + 223625 AAATGGCACATTTATTTCTAA---GAAGTCTTCCAAACTA-CCCCCTTTT-----CTTGTCTCTTAGCAGGTTGTTAGGTGATGCAGGCATTTCAGGAAA-GT--CACAAAGTTACTT---------GGTCATACCTCACCAAATATCAGTA--TTCTTAACACACAATATAAA s panTro5.chr2A 1368285 151 + 111504155 AAATGGCACATTTATTTCTAA---CAAGTCTCCCAAACTA-CCACCTTTT-----CTTGTCTCTTAGCAGGTTGTTAGGTGATGCAGGCATTTCAGGAAA-GT--CACAAAGTTACCT---------GTTCATACCTCACCAAATATCAGTA--TTCTTAACACACAATATAAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1328371 151 + 114371477 AAATGGCACATTTATTTCTAA---CAAGTCTCCCAAACTA-CCACCTTTT-----CTTGTCTCTTAGCAGGTTGTTAGGTGATGCAGGCATTTCAGGAAA-GT--CACAAAGTTACTT---------GTTCATACCTCACCAAATATCAGTA--TTCTTAACACACAATATAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1353458 151 + 1464242 AAATGGCACATTTATTTCTAA---GAAGTCTTCCAAACTA-CCCACTTTT-----CTTGTCTCTTAGAAGGTTGTTAGGTGATGCAGGCATTTCAGGAAA-GT--CACAAAGTTACTT---------GTTCATACCTCACCAAATATCAGTA--TTCTTAACACACAATATAAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1078910 151 + 81552678 AAATGGCACATTTATTTCTAA---CAAGTCTCCCAAACTA-CCCCCTTTT-----CTTGTCTCTCAGCAGGTTGTTAGGTGATGCAGGCATTTCAGGAAA-GT--CACAAAGTTACTT---------GTTCATACCTCACCAAATATCAGTA--TTCTTAACACACAATATAAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1409171 150 + 108979918 AAACGGCACGTTTATTTCTAA---GAAGTCTCCCAAACTACCCCCCTTTT-----CTTGTCTTTTAGCAGGTTGTTAGGTGATGCAGGTATTTCAGGAAA-GT--CAC--AGTTATTT---------GTTCATAACTCACCAAATATCAGTA--TTCTTAATACACGATATAAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1381582 150 - 111193037 AAACGGCACGTTTATTTCTAA---GAAGTCTCCCAAACTACCCCCCTTTT-----CTTGTCTTTTAGCAGGTTGTTAGGTGATGCAGGTATTTCAGGAAA-GT--CAC--AGTTATTT---------GTTCATAACTCACCAAATATCAGTA--TTCTTAACACACGATATAAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1409995 150 + 3644372 AAACGGCACATTTATTTCTAA---GAAGTCTCCCAAACTACCCCCCTTTT-----CTTGTCTTTTAGCAGGTTGTTAGGTGATGCAGGTATTTCAGGAAA-GT--CAC--AGTTATTT---------GTTCATAACTCACCAAATATCAGTA--TTCTTAACACACGATATAAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1363763 149 - 10304083 AAACGGCACATTTATTTCTaa---caagtctcccaaacta-ccccctttt-----cttgtcttttagcaggttgttagatgatgcaggtatttcaggaaa-gt--CAC--AGTTATTT---------GTTCATAACTCACCAAATATCAGTA--TTCTTAACACACGATATAAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1438770 151 - 107702431 AAACGGCACATTTATTTCTAA---CAAGTCTCCCAAACTA-CCCCCTTTT-----CTTGTCTTTCAGCAGGTTGTTAGGTGATGCAGGTATTTCAGGAAA-GT--CACAGAGTTATTT---------GTTCATAACTCACCAAATATCAGTA--TTCTAAACATGCGATGTAAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 917424 149 - 2200435 AAACGGCACATTTATTTCTAA---CAAGTCTCCCAAACTA-CCCCCTTTT-----CTTGTCTTTTAGCAGGTTGTTAGGTGATGCAGGTATTTCAGGAAA-GT--CAC--AGTTATTT---------GTTCATAACTCACCAAATATCAGTA--TTCTTAACACACGATATAAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1347792 151 - 13651311 AAATGGCACATTTATTTCTAA---CAAGTCTTCCAAACTA-CCCCCTTTT-----CTTGTCTTTTAGCAGGTTGTTAGGTGATGCAGGTATTTCAGGAAA-GT--TGCAGAGTTATTT---------GTTCATAACTCACCAAATATCAGTA--TTCTTAACACACGATATAAA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1356109 151 - 108792865 GAATGGCACATTTATTTCTAA---CAAGTCTTCCAAACGG-CCCCCTTTC-----CTTGCCTTTTAGCAGGTTGTGAGATGGTGCCGGCATTTCAGAAAA-GTCGCAG--AGTTATTT---------GTTCATAAGTCACCAAATACCAGTA--TTCTGAACACAGGATATGGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1205503 149 - 7082604 AAATGGCACATTTATTTCTAA---CAGGTCTTCCAAACTG-CCCCCTTTT-----CTTGTCTTTTAGCAGGTCATGAGATGATGCGGCCACTTCAGAAAA-GT--CAG--AGTTATTT---------GTTCGTAACTCACCATATATCAGTA--TTCTTAACACGCAATATAGA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1293679 149 + 1864846 AAATGGCACATTTATTTCTAG---CAAGTCTTCCAAACTG-CCCCCTTTT-----CTTGTCTTTTAGGAGGTTGTGAGATGATGCGGGCAATTCAGAAAA-GT--CAC--AGTTATTT---------GTTCATAACTCACCAAATATCAGTA--TTCTTAACACACAATATAGA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 86048 149 + 287728 AAATGGCACATTTATTTCCAA---CAAGTCTTCCAAACTG-CCCCCTTTT-----CTTGTCTTTTAGCAGGTTGTGAGATGATGCGGACATTTCAGAAAA-GT--CAC--AGTTATTT---------GTTCATAACTCACCAAATATCAGTA--TTCTTAACACACAATATAGA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 923547 147 + 5252280 GAGTGACA----TACTACTAAATCTAAATCTGCCAGACCC-TCCTCTTTT-----CCTGTGTGTTAGCAGCTTGTTAGATGATGTAGGCATTTCAGGAGA-GC--TGTGTAACTATTT---------GTTCATAACTCACCAAATAC---TA--TTCTTAAAGCACAATATAGA i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89988092 162 - 120129022 AATTGGCACATTTATTTTTTA---TAAATCTCCCAAAGCA-CTCTAATTT-----CCAGGTTGTCTTGAAACCTATAAATGAATTCTACATTCTAGAACA-AC--CCTGCAGttgtttttgtttttgtttttTACATCATCCAGTATCAGCAGTGTCTTAATGCCTACTATAAA i mm10.chr12 C 0 I 131 s dasNov3.JH576208 1667417 155 + 4416731 AAATGGCACATTTGTTTTTAA-----AACTTCTCAGATAA-TTCCTTTTTACTAGATTGTCTCTAAGCAGTTAGTTAAATGATATAGGTATTTTATGAGACAT--CATATAGCTGTTT---------GTCCCTAATTCATCAAGTAATAATA--TTTTGAATGTACAATATAAA i dasNov3.JH576208 I 1113 C 0 a score=1112164.000000 s hg38.chr2_KI270774v1_alt 90859 116 + 223625 ACTGAGGCTATCAGAATATTTAATAAACCAG-----------------------------------------------ATGAG--CACAACATCCTC--TTAATGATCAC-TAATGTTTCCATTATCCCTTGTGGCAATTTAAATTCACTAAA--ATAAGAACAATCATG s panTro5.chr2A 1368436 116 + 111504155 ACTGAGGCTATCAGAATATTTAATAAACCAG-----------------------------------------------ATGAG--CACAACATCCTC--TTAATGATCAC-TAATGTTTCCATTATCCCTTGTGGCAATTTAAATTCACTAAA--ATAAGAACAATCATG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1328522 116 + 114371477 ACTGAGGCTATCAGAATATTTAATAAACCAG-----------------------------------------------ATGAG--CACAACATCCTC--TTAATGATCAC-TAATGTTTCCATTATCCCTTGTGGCAATTTAAATTCACTAAA--ATAAGAACAATCATG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1353609 116 + 1464242 ACTGAGGCTATCAGAATATTTAATGAACCAG-----------------------------------------------ATGAG--CATAACATCCTC--TTAATGATCAC-TAAAGTTTCCATTATCCCTTGTGGCAATTTAAATTCACTAAA--ATAAGAACAATCATA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1079061 112 + 81552678 ACTGAGGCTATCAGCATATTTAATAAACCAG-----------------------------------------------ATGAG--CACAACATCCTC--TTAATGATCGC-TAATGTTTCCATTATCCTTTGTGGCAATTTAAATTCACTAAA--ATAAG----ATCATG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1409321 115 + 108979918 ACTGAGGCTATCAGAATATTTCATAAACCAG-----------------------------------------------ATGAA---ACAACATCCTC--TTAATGATCAC-TAATGTTTCCGTTATCCTTTGTGGCAACTTAAATTCACTACA--ATAAGAACAATCATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1381732 115 - 111193037 ACTGAGGCTATCAGAATATTTCATAAACCAG-----------------------------------------------ATGAA---ACAACATCCTC--TTAATGATCAC-TAATGTTTCCGTTACCCTTTGTGGCAACTTAAATTCACTACA--ATAAGAACAGTCATG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1410145 115 + 3644372 ACTGAGGCTATCAGAATATTTCATAAACCAG-----------------------------------------------ATGAA---ACAACATCCTC--TTAATGATCAC-TAATGTTTCCGTTATCCTTTGTGGCAACTTAAATTCACTACA--ATAAGAACAATCATG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1363912 115 - 10304083 ACTGAGGCTATCGGAATATTTCATAAACCAG-----------------------------------------------ATGAA---ACAATATCCTC--TTAATGATCAC-TAATGTTTCCGTTACCCTTTGTGGCAACTTAAATTCACTACA--ATAAGAACAATCATG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1438921 115 - 107702431 ACTGAGGCTATCAGAATATTTCATAAACCAG-----------------------------------------------ATGAA---ACAACATCCTT--TTAATGATCAC-TAATGTTTCCGTTATCCTTTGTGGCAATTTAAATTCACTACA--ATCAGAACAATCATG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 917573 115 - 2200435 ACTGAGGCTATCAGAATATTTCATAAACCAG-----------------------------------------------ATGAA---ACAACATCCTC--TTAATGATCAC-TAATGTTTCCGTTACCCTTTGTGGCAACTTAAATTCACTACA--ATAAGAACAATCATG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1347943 112 - 13651311 GCTGAGACTATCAGAATATTTCATAAACCAG-----------------------------------------------ATGAA---AC---ATCCTC--TTAATGATCAC-TAATGTTTCTGTCATCCTTTGTGGCAATTTAAATTCACTACA--ATAAGAACAATCATG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1356260 116 - 108792865 ATTGAAGCTATCAGAATATTTAATCAATCAG-----------------------------------------------ATGAG--CACCATATCCTC--TTAACAGTCAC-TCAACTTTCAGTTATCCCTTGTGACAATTTAAATTTCCTAAA--ACATAAATACTTATG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1205652 112 - 7082604 ATTGAAGTTATCAGAATATTT----AATCAG-----------------------------------------------ATGAG--CATGATATCCTC--TTAACAATCAC-TCAACTTTCAGTTATCCCTTGTGGCCATTTAAATTCCCTAAA--ATAAGAATAATCATA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1293828 108 + 1864846 ATTGAAGTTATCAGAATATTT----AATCAG-----------------------------------------------ATGAG--CACAATATCCTC--TTAAAAATCAC-TCAGC-TTCAGTTATCCCTTGTGGCAATTTAAATTCCCTAAA--ATAAGAA---TCATG i cebCap1.NW_016107827v1 C 0 I 14 s aotNan1.NW_018513311v1 86197 112 + 287728 AGTGAAGTTAGCAGAATATTT----AATCAG-----------------------------------------------ATGAG--CACAATATCCTC--TTAACAATCAC-TCAACTTTCAGTTATCTCTCGTGGCAATTTAAATTCCCTAAA--ATAAGAATACTCATA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 923694 109 + 5252280 AATGAGACT--CACAACATTTAATAAACCGA-----------------------------------------------ATAAG--CACAA-ATCCTC----AAGGTTCAT-TAATGTTTCGATTATCCCTTGTAGCAATTTAAA--AATCACA--AAAAATATAATTGTG i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89988385 121 - 120129022 GCTGAGCTTATCAGAAGCATTAGCAAACCAG-----------------------------------------------ATGAGGGCATACCATCTTAGGTTGATGGACATGTCAGTCTTTTCCCTTCCCTTGCAGCAACCTCAGCTCACCAAA--GTACGAGCAATTATG i mm10.chr12 I 131 C 0 s dasNov3.JH576208 1667572 164 + 4416731 GCTGAGCTTATCAGAATATTTAATTAAACAGAATGCTTAAATGTCAATGATGGAAGACAGTGTTGTCTTTCAAAAATAATGAG--CACTAAATCCTC-TTTAACATTCAT-TAATATTTCTGTTA-CCCTTGTAGCAATTTATATTCATTAAAAGATAGGAACAAT-ATG i dasNov3.JH576208 C 0 C 0 a score=118805.000000 s hg38.chr2_KI270774v1_alt 90975 16 + 223625 CAACCTTCTTTTTGGC s panTro5.chr2A 1368552 16 + 111504155 CAACCTTCTTTTTGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1328638 16 + 114371477 CAACCTTCTTTTTGGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1353725 16 + 1464242 CAACCTTCTTTTTGGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1079173 16 + 81552678 CAACCTTCTTTTTGGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1409436 16 + 108979918 CAACCTTCTTTTTGGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1381847 16 - 111193037 CAACCTTCTTTTTGGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1410260 16 + 3644372 CAACCTTCTTTTTGGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1364027 16 - 10304083 CAACCTTCTTTTTGGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1439036 16 - 107702431 CAATCTTCTTTTTGGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 917688 16 - 2200435 CAACCTTCTTTTTGGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1348055 16 - 13651311 CAACTTTCTTTTTGGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1356376 16 - 108792865 TGATTATCCTTATTGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1205764 16 - 7082604 TGATTATTCTTATTGC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 86309 16 + 287728 TGATTATTCTTGTTGC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 923803 16 + 5252280 CAACCTTCCTATTTCT i otoGar3.GL873658 C 0 I 1 s mm10.chr12 89988506 13 - 120129022 ---CCATCTTCTCTGC i mm10.chr12 C 0 I 3 s dasNov3.JH576208 1667736 12 + 4416731 AAATCCTCTTTC---- i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1293936 14 + 1864846 I a score=3357701.000000 s hg38.chr2_KI270774v1_alt 90991 301 + 223625 TTACATCAAGGA---AGATTCCATTTCTATGAAA-CCCACATCTTCAAGATTACACTGTAAAGACAAATTGAACT--AAAACTTTGAAGATTTCTACACAAATGCAAAGAATTCAGATCTGGGATTCCA--TCTTTTATTCTAATGCATACTTGATCTGGTT---GTATTCTGAATCCTCCTTACAGGAATGTGATGTGGACTGACACGTAATTTGGAAACTACTAGAAGG-CTCTTGAATGGAACCAGGGATTCTTCA-------CACTTCATAGAGCAGCTGAAAGGGACTTGAGCACTACTTGGGCCTTCTGACGCC s panTro5.chr2A 1368568 303 + 111504155 TTACATCAAGGA---AGATTCCATTTCTATGAAA-CCCCCATCTTCAAGATTACACTGTAAAGACAAATTGAACTAAAAAACTTTGAAGATTTCTACACAAACGCAAAGAATTCAGGTCTGGGATTCCA--TCTTTTGTTCTAATGCATACTTGATCTGGTT---GTGTTCTGAATCCTCCTTACAGGAATGTGATGTGGACTGACACGTAATTTGGAAACTACTAGAAGG-CTCTTGAATGGAACCAGGGATTCTTCA-------CACTTCATAGAGCAGCTGAAAGGGACTTGAGCACTACTTGGGCCTTCTGACGCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1328654 303 + 114371477 TTACATCAAGGA---AGATTCCATTTCTATGAAA-CCCCCATCTTCAAGATTACACTGTAAAGACAAATTGAACTAAAAAACTTTGAAGATTTCTACACAAACGCAAAGAATTCAGGTCTGGGATTCCA--TCTTTTGTTCTAATGCATACTTGATCTGGTT---GTGTTCTGAATCCTCCTTACAGGAATGTGATGTGGACTGACACGTAATTTGGAAACTACTAGAAGG-CTCTTGAATGGAACCAGGGATTCTTCA-------CACTTCACAGAGCAGCTGAAAGGGACTTGAGCACTACTTGGGCCTTCTGACGCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1353741 301 + 1464242 TTACATCAAGGA---AGTTTCCATTTCTATGAAA-CCCACATCTTCAAGATTACACTGTAAAGACAAATTGAACT--AAAACTGTGAAGATTTCTACACAAATGCAAAGAATTCAGATCTGGGATTCCA--TCTTTTATTCTAATGCATACTTGATCTGGTT---GTATTCTGAATCCTCCTTACAGGAATGTGATGTGGACTGACACGTAATTTGGAAACTACTAGAAGG-CTCTTGAATGGAACCAGGGATTCTTCA-------CACTTCATAGAGCAGCTGAAAGGGACTTGAGCACTACTTGGGCCTTCTGACGTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1079189 301 + 81552678 TTACATCAAGGA---AGATTCCATTTCTATGAAA-CCCCCATCTTCAAGATTACACTGTAAAGACAAATTGAACT--AAAGCTTTGAAGATTTCTGCACAAATGCAAAGAATTCAGATCTGGGATTCCA--TCTTTTATTCTAATGCATTCTTGATCTGGTT---GTATTCTGAATCCTCCTTACAGGAATGTGGTGTGGACTGACATGTAATTTGGAAACTACTAGAAGG-CTCTTGAGTGGAACCAGGGATTCTTCA-------CACTTCATAGGGCAGCTGAAAGGAGCTTGAGCACTACTTGGGCCTTCTGACGCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1409452 302 + 108979918 TTCCATCAAGGA---AGATTCCATTTCTAGGAAACCCCCCATCTTCAAGATTACACTGTAAAGACAAATTGAACT--AAAACTTTGAAGATTTCCACACAAATGCAAAGAATTCAGATCTGGGATTCCA--TCTTTTGTTCTAATGCCTACTTGATCTGGCT---GTATTCTGAATCCCCCTTACGGGAATGTGATGTGGACTGACACGTAATTTGGAAACTACTAGAAGG-CTCTTGAGTAGAACCAGGGATTCTTCA-------CGCTTCATAGAGCAGCTGAAAGGGGCTTGAGCACTACTTGGGCCTTCTGACGCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1381863 302 - 111193037 TTCCATCAAGGA---AGATTCCATTTCTAGGAAACCCCCCATCTTCAAGATTACACTGTAAAGACAAATTGAACT--AAAACTTTGAAGATTTCCACACAAATGCAAAGAATTCAGATCTGGGATTCCA--TCTTTTGTTCTAATGCCTACTTGATCTGGCT---GTATTCTGAATCCCCCTTACGGGAATGTGATGTGGACTGACACGTAATTTGGAAACTACTAGAAGG-CTCTTGAGTAGAACCAGGGATTCTTCA-------CGCTTCATAGAGCAGCTGAAAGGGGCTTGAGCACTACTTGGGCCTTCTGACGCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1410276 302 + 3644372 TTCCATCAAGGA---AGATTCCATTTCTAGGAAACCCTCCATCTTCAAGATTACACTGTAAAGACAAATTGAACT--AAAACTTTGAAGATTTCCACACAAATGCAAAGAATTCAGATCTGGGATTCCA--TCTTTTGTTCTAATGCCTACTTGATCTGGCT---GTATTCTGAATCCCCCTTACGGGAATGTGATGTGGACTGACACGTAATTTGGAAACTACTAGAAGG-CTCTTGAGTAGAACCAGGGATTCTTCA-------CGCTTCATAGAGCAGCTGAAAGGGGCTTGAGCACTACTTGGGCCTTCTGACGCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1364043 302 - 10304083 TTCCATCAAGGA---AGATTCCATTTCTAGGAAACCCCCCATCTTCAAGATTACACTGTAAAGACAAATTGAACT--AAAACTTTGAAGATTTCTACACAAATGCAAAGAATTCAGATCTGGGATTCCA--TCTTTTGTTCTAATGCCTACTTGATCTGGCT---GTATTCTGAATCCCCCTTACGGGAATGTGATGTGGGCTGACACGTAATTTGGAAACTACTAGAAGG-CTCTTGAGTAGAACCAGGGATTCTTCA-------TGCTTCATAGAGCAGCTGAAAGGGGCTTGAGCACTACTTGGGCCTTCTGACGCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1439052 301 - 107702431 TTCCATCAAGGA---AGATTCCATTTCTAGGAAA-CCCTCATCTTCAAGATTACACTGTAAAGACAAATTGAACT--AAAACTTTGAAGATTTCTACACAAATGCAAAGAATTCAGATCTGGGATTCCA--TCTTTTATTCTAATGCCTACTTGATCTGGCT---GCATTCTGAATCCTCCTTACGGGAACGTGATGTGGACTGACACATAATTTGGAAACTACTAGAAGG-CTCTTGAGTGGAACCAGGGATTCTTCA-------CGCTTCATAGAGCAGCTGAAAGGGGCTTGAGCACTACTTGGGCCTTCTGACGCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 917704 302 - 2200435 TTCCATCAAGGA---AGATTCCATTTCTAGGAAACCCCCCATCTTCAAGATTACACTGTAAAGACAAATTGAACT--AAAACGTTGAAGATTTCTACACAAATGCAAAGAATTCAGATCTGGGATTCCA--TCTTTTGTTCTAATGCCTACTTGATCTGGCT---GTATTCTGAATCCCCCTTACGGGAATGTGATGTGGACTGACACGTAATTTGGAAACTACTAGAAGG-CTCTTGAGTAGAACCAGGGATTCTTCA-------TGCTTCATAGAGCAGCTGAAAGGGGCTTGAGCACTACTTGGGCCTTCTGACGCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1348071 301 - 13651311 TTCCATCAAGGA---AGATTCCATTTCTAGGAAT-CCCCCATCTTCAAGATTACACTGTAAAGACAAATTGAACT--AAAACTTTGAAGATTTCTACACAAATGCAAAGAATTCAGATCTGGGATTCCA--TCTTTTATTCTAATGCCTACTTGATCTGGCT---GTATTCTGAATCCCCCTTACAGGAATGTGATGTGGACTGACACGTCATTTGGAAACTACTAGAAGG-CTCTTGAGTGGAATCAGGGATTCTTCA-------CGCTTCGTAGAGCAGCTGAAAGGGGCTTGAACACTACTTGGGCCTTCTGACGCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1356392 271 - 108792865 TTACATCAAGGA---AGGTTTTATTTCTATGAAA-CCCCCACCTTCAACATTACACTGTAAAGAAAAATTGTACT--AAAACTTAGAAGATTTCTACACAAATGCAAAGAATTCAGATCCGGGATTCCA--TCTTTTATTGTAACGCATACTTGATCTGGTG---ATACTCT---------------GAATGTGATGTGGACTGACAGGTCGTTTAGAAACTGCCA----------------GAACCAGGGACTCTCCA-------CACTTCATGGAGCAGCTGAAAGGGGCTTGAGCACGGCTTGGGCCTTCTGACGCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1205780 295 - 7082604 TTACATAAAGGA---AGATTTTATTTCTGTGAAA--GCCCACCTTCAACATTACACTGTAAAGAAAAATTGTACT--AAAACTT---AGATTTCTACACAAATGCAAAGAATTCAGATCTGGGATTCCA--TCTTTCATTGTAAAGCATGCTTGATCTGGTG---ATATTCTGAA-CCTCCTTAAAGGAATGTGATGTGGACTGACAGGCAGTTTGGAAACTACTAGAAGG-CTCTTGAGTGGAACCAGAGATTCTTCA-------CACTTCAGGGAGCAGCTGAAAGGGGCCTGAGCAAGGCTTGGG-CTTCTGACGCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1293950 301 + 1864846 TTACATCAAGGA---AGATTTTATTTCTATGAAA-CCCCCACCTTCAACATTACACTGTAAAGAAAAATTGTACT--AAGACTTAGATGATTTCTACACAAATGCAAAGAATTCAGATCTGGGATTCCA--TCATTTATTGTGATGCAGAGTTGATCTGGTG---ATATTCTGAATCCTCCTTAAAGGAATGTGATGTGGACTGACAGGTAGTTTGGAAACTACTAGAAGG-CTCTTGAGGGGAACCAGGTATTCTTCA-------CACTTCATGGAGCAGCTGAAAGGGGCCTGAGCACGGCTTGGGCCTTCTGACGCC i cebCap1.NW_016107827v1 I 14 C 0 s aotNan1.NW_018513311v1 86325 301 + 287728 TTACATCAAGGA---AGATTTTATTTCTATGAAA-CCCCCACCTTCAACATTACACTGTAAAGAAAACTTGTACT--AAAACTTAGGAGATTTCTACACAGATGCAAAGAATTCAGTTCTGGGACTCCA--TCTTTCACTGTAATGCCTACTTGATCTGGTG---ACATTCTGAATCCTCCTTAAAGGAGGGTGATGTGGACTGACAGGTAGTTTGGAAACTACTAGAAGG-CTCTTGAGTGGAACCAGGGATTCTTCA-------CACTTCATGGAGCAGCTGAAAGGGGCTTGAGCACGACTTGGGCCTTCTGACACC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 923820 279 + 5252280 TTATGTCAAGGA---AGACTCTGTTTCTTTTAAA-CACTAATCTTCAGATTTGCACTATAAAGAGTAATTATAAT--AAGTCTTTGAGGAACACTACACAGATGCAAAGAATTAAGCTCTGGGATTCCA--T--TTCACTCTAATG-GTGCTTG-CCTGGTG---ATATTCTGAATGCTGCCTACAAGAATGTGCTATG-----------------GAAATTACTAGAAGGCCCCTTCAGGGGAACCAAGGACTCTTCA-------CAGTTCACAGAGCAGCTAAAAGG--CGTGAGTGCTGCTTCAGCTGTCTGACGCC i otoGar3.GL873658 I 1 C 0 s mm10.chr12 89988522 297 - 120129022 TTAGGCCAAGGATACAACGGTCATGT-TGGGAAA---CTCTTCTTCAGGATAACCCTGTAAAGGTGAGCTGAACT--AGAACTACAAG------TTAACAGGTGCAAAGAATTCA-------GACTCCAGCTCATTTATCCTAATGGCTGCTGGGCCTGATGACAGCACTCTGGATCCAGC-TATGGGAGTATGATATGGTGTGGCATGTGATTTAG-AACTCCCTGAAAA-CTCCTGAGAGAGACAAAGGGCCCTTCAACATTCCCACTCCACAGAGCAGCTGTGGAAGGCACACACGGTACTTGAG-CATCTGACGTC i mm10.chr12 I 3 C 0 s dasNov3.JH576208 1667748 278 + 4416731 TTATCTCAATAA---AAATCATATTTGTTTGAAA-CCCTCATCTTCAGAATAACACTACAAAGATGAATTGCACT--AAAACTTTCAAAAGCACTATACAAATGCAAAGAAC------CTGGAGTTCCA--TTTTCCACTAT-----TTGTTTAATCTGGTG---ATACTCTG-ATAATCCTTATG-----ATAATAAGGGATAATAAG------GGAAATTATTAGACGG-CTCTTAGATGGAACATAGGAGTCTTCA-------CACTCCATAGAGCACCCAAAAGAGGCATGCACACTACTTGAGTAGTCTGACGTC i dasNov3.JH576208 C 0 C 0 a score=472616.000000 s hg38.chr2_KI270774v1_alt 91292 62 + 223625 AGAGTTACAGAATGTTCTTTTGCCAAATCATGGATGGCCACTCGAGCACACAGATATTCAGG s panTro5.chr2A 1368871 62 + 111504155 AGAGTTACAGAATGTTCTTTTGCCAAATCATGGATGGCCACTCGAGCACACAGATATTCAGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1328957 62 + 114371477 AGAGTTACAGAATGTTCTTTTGCCAAATCATGGATGGCCACTCGAGCACACAGATATTCAGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1354042 62 + 1464242 AGAGTTACAGAATGTTTTTTTGCCAAATCATGGATGGCTACTCGAGCACACAGATATTCAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1079490 62 + 81552678 AGAGTTACAGAATGTTCTTTTGCCGAATCATGGATGGCCACTTGAGCACACAGATATTCAGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1409754 62 + 108979918 AGAGTTACAGAATGTTCTTTTGCCAGATCATGGATGGTCACTCGAGCACACAGATATCCAGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1382165 62 - 111193037 AGAGTTACAGAATGTTCTTTTGCCAGATCATGGATGGTCACTCGAGCACACAGATATCCAGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1410578 62 + 3644372 AGAGTTACAGAATGTTCTTTTGCCAGATCATGGATGGTCACTCGAGCATACAGATATCCAGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1364345 62 - 10304083 AGAGTTACAGAATGTTCTTTTGCCAGATCATGGATGGCCACTCGAGCACACAGATATCCAGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1439353 62 - 107702431 AGAGTTACAGAATGTTCTTTTGCCAGATCATGGATGGTCACTTGAGCACACAGATATTCAGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 918006 62 - 2200435 AGAGTTACAGAATGTTCTTTTGCCAGATCATGGATGGCCACTCGAGCACACAGATATCCAGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1348372 62 - 13651311 AGAGTTACAGAATGTTCTTTTGCCAAATCATGGATGGTCACTCGAGCACACAGATATTCAGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1356663 23 - 108792865 AGAGTC--------------------ATCACGGAT----GTTCGGG-A-------------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1206075 28 - 7082604 AGAGTC--------------------ATCACGGATAGCCACTCGAGCA-------------- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1294251 42 + 1864846 AGAGTC--------------------ATCACTCATGGCCACTTGAGCACACGGATGTTCAGG i cebCap1.NW_016107827v1 C 0 I 31 s aotNan1.NW_018513311v1 86626 42 + 287728 AGAGTC--------------------ATCACGGGTGACCACTGGAGCACACGGATGTTCAGG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 924099 62 + 5252280 AAAGTTACAACGTGTTCTATTTCCAAACTGAGGGTGGCCACTTGACCACACAGATATGCAAG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1668026 56 + 4416731 AAAGGCACAGAACATT------CCAATTCATGGAGGATCACTTGACCACACAGGTGCACAAG i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89988819 0 - 120129022 C a score=235000.000000 s hg38.chr2_KI270774v1_alt 91354 33 + 223625 ATCCTCTTGTCCCCGTGTGCAGAGAGGCCTGG-T s panTro5.chr2A 1368933 33 + 111504155 ACCCTCTTGTCCCCGTGTGCAGAGAGGCCTGG-T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1329019 33 + 114371477 ACCCTCTTGTCCCCGTGTGCAGAGAGGCCTGG-T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1354104 33 + 1464242 ACCCTCTTGTCCCCGTGTGCAGAGAGGCCTGG-T i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1079552 33 + 81552678 ACCCCCTTGTCCCTGTGTGCAGAGAGGCCTGG-T i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1409816 33 + 108979918 ACCCCCTTGTCCCCGTGTGCAGAGAGGCCTGG-T i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1382227 33 - 111193037 ACCCCCTTGTCCCCGTGTGCAGAGAGGCCTGG-T i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1410640 33 + 3644372 ACCCCCTTGTCCCCGTGAGCAGAGAGGCCTGG-T i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1364407 33 - 10304083 ACCCCCTTGTCCCCGTGTGCAGAGAGGCCTGG-T i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1439415 33 - 107702431 ACCCCCTTGTCCCCGTGTGCAGAGAGGCCTCG-T i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 918068 33 - 2200435 ACCCCCTTGTCCCTGTGTGCAGAGAGGCCTGG-T i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1348434 33 - 13651311 ACCCCCTCGTCCCCGTGTGCAGAGAGGCCTGG-T i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1356686 30 - 108792865 --CCCCTCGGCCCCTGGTGCAGACCGCCTGGG-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1206103 30 - 7082604 --CCCCTCGGCCCCTGGTGAAGACCGCCTGGG-- i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 86668 32 + 287728 -ACCCCTTGGCCCCTGGTGCAGACCGCCCTGGG- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 924161 31 + 5252280 --ACCCTTGGTGCCCTGTGCAGAAGGCACTGG-T i otoGar3.GL873658 C 0 I 1 s dasNov3.JH576208 1668082 33 + 4416731 AACCTGTTATTCCTCTTGTCAGTGGGAACAGC-T i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89988819 0 - 120129022 C e cebCap1.NW_016107827v1 1294293 31 + 1864846 I a score=423596.000000 s hg38.chr2_KI270774v1_alt 91387 46 + 223625 ----GCTGG---------------------ATATCGTTTATGTGAGTTGAGCGGATAGCTGAGGCTATGTG s panTro5.chr2A 1368966 46 + 111504155 ----GCTGG---------------------ATATTGTTTATGTGAGTTGAGCGGATAGCTGAGGCTATGTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1329052 46 + 114371477 ----GCTGG---------------------ATATTGTTTATGTGAGTTGAGCGGATAGCTGAGGCTATGTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1354137 46 + 1464242 ----GCTGG---------------------ATATCGTTTATGTGAGTTGAGTGGATAGCCGAGGCTATGTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1079585 46 + 81552678 ----GCTGG---------------------ATACCGTTTATGTGAGTTCAGCGGATAGCTGAGGCTATGTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1409849 46 + 108979918 ----GCTGG---------------------ATACCGTTTATGTGAGATGAGCAGATAGCTGAGGCTATGTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1382260 46 - 111193037 ----GCTGG---------------------ATACCGTTTATGTGAGATGAGCAGATAGCTGAGGCTATGTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1410673 46 + 3644372 ----GCTGG---------------------ATACCGTTTATGTGAGATGAGCAGATAGCTGAGGCTATGTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1364440 46 - 10304083 ----GCTGG---------------------ATACCATTTATGTGAGATGAGCAGATAGCTGAGGCTATGTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1439448 46 - 107702431 ----GCTGG---------------------ATACCATTTATGTGAGATGAGCAGATAGCTGAGGCTATGTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 918101 46 - 2200435 ----GCTGG---------------------ATACCATTTATGTGAGATGAGCAGATAGCTGAGGCTATGTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1348467 46 - 13651311 ----GCTGG---------------------ATACTGTTTATGTGAGATGAGCAGATAACTGAGGCTATCTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1356716 46 - 108792865 ----GCTGG---------------------ATGCTGTTTATGTGAGTTGGGCTGATGGCTGAGACCACGTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1206133 46 - 7082604 ----GCTGG---------------------ATGCTGTTTATGTGAGTTGGGCTGACAGCTGAGTCCACGTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1294324 39 + 1864846 ----GCTGG---------------------ATGCTGTTTATGTGAGTTGG-------GCTGAGACCACGTG i cebCap1.NW_016107827v1 I 31 C 0 s aotNan1.NW_018513311v1 86700 46 + 287728 ----GCTGG---------------------ATGCCGTCTATGTGAGTTGGGCTGATAGCTGAGACCACGTG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 924193 58 + 5252280 ----ACTGACG--------CCTTCATAAACAAACTGTTCAAGGTGATGGCTCTGATAGCTGAG-CTTTGTG i otoGar3.GL873658 I 1 C 0 s dasNov3.JH576208 1668115 71 + 4416731 ATCCACTGACATTTAACACCCTGTACAAACAACTCAATTATGTCAGTTGTACCGATAGCTGAGGTTATGTG i dasNov3.JH576208 C 0 I 2629 e mm10.chr12 89988819 0 - 120129022 C a score=366829.000000 s hg38.chr2_KI270774v1_alt 91433 43 + 223625 GATGCATGTAA-----CTAGTTAGAGCA-TTTTACTAAGTTAATGACCG s panTro5.chr2A 1369012 43 + 111504155 AATGCACATAA-----CTAGTTAGAGCA-TTTTACTAAGTTAATGACTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1329098 43 + 114371477 AATGCACATAA-----CTAGTTAGAGCA-TTTTACTAAGTTAATGACTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1354183 48 + 1464242 GATGCACGTAACTAGTCTAGTTAGAGCA-TTTTACTAAGTTAATGACCG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1079631 43 + 81552678 GATGCACATAA-----CTCGTTAGAGCA-TCTTACCAAGTTAATGACTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1409895 43 + 108979918 GATGCACATAA-----CTAGTTAGAGTG-TTTTACTAAGTTAATGACTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1382306 43 - 111193037 GATGCACATAA-----CTAGTTAGAGTG-TTTTACTAAGTTAATGACTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1410719 43 + 3644372 GATGCACATAA-----CTAGTTAGAGTG-TTTTACTAAGTTAATGACTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1364486 43 - 10304083 GATGCACATAA-----CTAGTTAGAGTG-TTTTACTAAGTTAATGACTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1439494 43 - 107702431 GATGCACATAA-----CTAGTTAGAGTG-TTTTACTAGGTTAATGACTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 918147 43 - 2200435 GATGCACATAA-----CTAGTTAGAGTG-TTTTACTAAGTTAATGACTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1348513 43 - 13651311 GATGCACATAA-----CTAGTTAGAGCG-TTTTACTAAGTTAATGACTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1356762 42 - 108792865 GATGCACATGG-----CCAGTTAGAGCG-CTTCACTAAGTT-ATGACTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1206179 43 - 7082604 GACGCACACAG-----CCAGTGAGAGCA-CTTTACTAAGTGAATGAATG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1294363 43 + 1864846 GATGCACAcag-----ccagttagagca-ctttactaagttaacaactg i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 86746 33 + 287728 GATGCACACAG-----CCA-----------TTAACTAAGTTAATGACTG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 924251 43 + 5252280 TATGC-CGTAA-----GCAACCTGCACATTTTTACCAATTTAATTACTT i otoGar3.GL873658 C 0 C 0 e mm10.chr12 89988819 0 - 120129022 C e dasNov3.JH576208 1668186 2629 + 4416731 I a score=2153848.000000 s hg38.chr2_KI270774v1_alt 91476 230 + 223625 AAATCAGAGCTCTCAGGTCACTACTGGAATCAGCTCCTCTCCCTGTGAAGTAGTTAACTGTGG----TCATGATCTGCCCTCTGCACTTCCCAGTTAATTGCACCT-GCTTCCTGT-TTTCACGTGGGGA-GAGCATCCTCACCCAGCCTT-GGAAGCACTGACATTC---GAGTTGTGCGTGGGCTGTTGATGAATCCTGGGTCAGTGAGCTTAGCTGCCTAGGCAGGGTGGTAATTAGC- s panTro5.chr2A 1369055 231 + 111504155 AAATCAGAGCTCTCAGGTCACTACTGGAATCAGCTCCTTTCCCTGTGAAGTAGTTAACTGTGG----TCATGATCTGCCCTCTGCACTTCCCAGTTAATTGCACCT-GCTTCCTGT-TTTCACGTGGGGA-GAGCATCCTCACCCAGCCTT-GGAAGCACTGACATTC---GAGTTGTGCGTGGGCTGCTGATGAATCCTGGGTCAGTGAGCTTAGCTGCCTAGGCAGGGTGGTAATTAGCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1329141 231 + 114371477 AAATCAGAGCTCTCAGGTCACTACTGGAATCAGCTCCTTTCCCTGTGAAGTAGTTAACTGTGG----TCATGATCTGCCCTCTGCACTTCCCAGTTAATTGCACCT-GCTTCCTGT-TTTCACGTGGGGA-GAGCATCCTCACCCAGCCTT-GGAAGCACTGACATTC---AAGTTGTGCGTGGGCTGCTGATGAATCCTGGGTCAGTGAGCTTAGCTGCCTAGGCAGGGTGGTAATTAGCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1354231 231 + 1464242 AAATCAGAGCTCTCAGGTCACTACTGGAATCAGCTCCTTTCCCTGTGAAGTAGTTAACTGTGA----TCATGATCTGCCCTCTGCACTTCCCAGTTAATTGCACCT-GCTTCCTGT-TTTCACGTGGGGA-GAGCATCGTCACCCAGCCTT-GGAAGCACTGACATTC---GAGTTGTGCGTGAGCTGCTGATGAATCCTGGGTCAGTGAGCTTAGCTGCCTAGGCAGGGTGGTAATTAGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1079674 229 + 81552678 AAATCAGAGCTCTCAGGTCACTACCGGAATCAGCTCCTCTCC--GTGAAGTAGTTAATTGGGG----TCATGATCTGCCCTCTGCACGTCCCAGTTAACTGCACCT-GCTTCCTGT-TTTCATGTGGGGAGGGGCATCCTCACCT-GCCTT-GGAAGCACTGACGTTC---GAGTTGTGCGTGGGCTCCTGATGAATCCTGGGTCAGTGAGCTTAGCTGCCTAGGCAGGGTGGTAATTAGCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1409938 230 + 108979918 AAATCAGAGCTCTCTGGTCACTACTGGAATCAGCTCCTCTCTCTGTGAAGTAGTCAACTGTGG----TCCTGATCTGCCCTCTGCGCTTCCCAGTTAATTGCACCT-GCTTCCTGT-TTTCACGAGGGGA-GGGCACCCTCACTCTGCCTC-GGAAGCACTGACGTG----GAGTTGTGCATGGGCTCCTGATGGATCCTGGGCCCTTGAGCTTAGCTGCCTAGGTGGAGTAGTAATTAGCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1382349 230 - 111193037 AAATCAGAGCTCTCTGGTCACTACTGGAATCAGCTCCTCTCCCTGTGAAGTAGTCAACTGTGG----TCCTGATCTGCCCTCTGCGCTTCCCAGTTAATTGCACCT-GCTTCCTGT-TTTCACGAGGGGA-GGGCACCCTCACTCTGCCTC-GGAAGCACTGACGTG----GAGTTGTGCATGGGCTCCTGATGGATCCTGGGTCCGTGAGCTTAGCTGCCTAGGTGGAGTAGTAATTAGCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1410762 230 + 3644372 AAATCAGAGCTCTCTGGTCACTACTGGAATCAGCTCCTCTCCCTGTGAAGTAGTCAACTGTGG----TCCTGATCTGCCCTCTGCGCTTCCCAGTTAATTGCACCT-GCTTCCTGT-TTTCACGAGGGGA-GGGCACCCTCACTCTGCCTC-GGAAGCACTGACGTG----GAGTTGTGCATGGGCTCCTGATGGATCCTGGGTCCATGAGCTTAGCTGCCTAGGTGGAGTAGTAATTAGCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1364529 230 - 10304083 AAATCGGAGCTCTCTGGTCACTACTGGAATCAGCTCCTCTCCCTGTGAAGTAGTCAACTGTGG----TCCTGATCTGCCCTCTGCGCTTCCCAGTTAATTGCACCT-GCTTCCTGT-TTTCACGAGGGGA-GGGCACCCTCACTCTGCCTG-GGAGGCACTGACGTG----GAGTTGTGCGTGGGCTCCTGATGGATCCTGGGTCCGTGAGCTTAGCTGCCTAGGTGGGGTAGTAATTAGCG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1439537 230 - 107702431 AAATCAGAGCTCTCAGGTCACTACTGGAATCGGCTCCTCTCCCTGTGAAGTAGTCAACTGTGG----TCCTGATCTGCCCTCTGCACTTCCCAGTTAATTGCACCT-GCTTCCTGT-TTTCACGAGGGGA-GGGCACCCTCACCCTGCCTC-AGAAGCACTGACGTG----GAGTTGTGCGTGGGCTCCTGATGAATCCTGGGTCTGTGAGCTTAGCTGCCTAGGCGGGGTAGTAATTAGCG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 918190 230 - 2200435 AAATCAGAGCTCTCTGGTCACTACTGGAATCAGCTCCTCTCCCTGTGAAGTAGTCAACTGTGG----TCCTGATCTGCCCTCTGCGCTTCCCAGTTAATTGCACCT-GCTTCCTGT-TTTCACGAGGGGA-GGGCACCCTCACTCTGCCTT-GGAAGCACTGACGTG----GAGTTGTGCGTGGGCTCCTGATGGATCCTGGGTCCGTGAGCTTAGCTGCCTAGGTGGGGTAGTAATTAGCG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1348556 230 - 13651311 AAATCAGAGCTCTCAGGTCACTACTGGAATCAGCTCCTCTCCCTGTTAAGTAGTCAACTGTGG----TCCTGATCTGCCCTCTGCGCTTCCCAGTTAATTGCACCT-GCTTCCTGT-TTTCATGAGGGGA-GGGCATCCTCACCCTGCCTC-CGAAGCACTGACGTG----GAGTTGTGCGTGGGCTCCTGATGAATCCTGGGTCCGTGAGCTTAGCTGCCCAGGCGAGGTAGTAATTAGTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1356804 233 - 108792865 AGATCAGAGCTCTC-GGTCCCTGCTGTGATCAGCTCCTCTCCCTGTGAAGCAGTCAGCCATGG----TCCTGATCTGCCCTCTGTGCTGCCCAGCGAATCGCACCT-GCTTCCTGT-TTTCATTTGGGGA-GGGCACGCGCACCCTGCCTT-GGAAGCACTGACGTTCGAGCAGTTATGCATGGGCTCCTGATTAACCCTGAGCCAGTGAGCTTAGCTGCCTGGGTGGGCTGGTAATTAGCG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1206222 234 - 7082604 AGATCAAAGCTCTCGGGTCACTGCTGTAATCAGCTCCTCTCCTTGTGAAGCTGTCAGCCGTGG----TCCTGATCTGCCCTCTGCACTGCCCAGTGGGTCGCACCT-GCTTCCTGT-TTTCATTTGCGGA-GGGCACGCGCACCCTGCCTT-GGAAGCACTGATGTTTGAGGAGTTATGTGTGGGCCCTTGATTAACCCTGAGCCGGTGAACTGAGCTGCCTGGGTGGGTGGGTAGTTAGCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1294406 207 + 1864846 agatcagagctctc---------------------------cctgtgaagcagtcagctgtgg----tcCTGATCTGCCCTCTGCACTGCCCAGTGGATCGCACCT-GCTTCCTGT-TTTTATTTGGGGA-GGGCACACGCACCCTGCCTT-GGAAGCACTGATGTTTGAGGAGTTATGTGTGGGCCCCTGATTAACCCTGAGCCAGTGAGCTTAGCTGCCTGGGTGGGTGGGTAATTAGCG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 86779 233 + 287728 AGATCAGAGCTCTCAGGTCACTGCTGTGATCAGCTCCTCTCCCGGTGAAGCAGTCAGCCGTGG----TCCAGATCTGCCCTCTGCACTGCCCAGTGAGTCGCACCT-GCTTCCTGT-TTTCATTTGGGGA-GGGCATGTGCCCCCTGCCTT-GGAAGCACTGACGTCTGAGGAGTTCTGCGT-GGCTCCTGATTAACCCTGAGCCAGTGAGCTCAGCTGCCTGGGTGGGTTGGTAATTAGCG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 924294 231 + 5252280 AAACAAGAGTGCTCAGGTCACTGCTGTGGTCAGCTTCACTCCTGGTTAAGTAGCCGGCCAAGGATGTACCTGAACTGCCCACTGCGCTGGCCAGTGAGTCCCACCT-GCTCCCTGC-TT------GAGGG-TCATGTCCTCACCCTGCCCTAGGAAGTGCTGATGTTCCAGAGGTTTTG--TGGCATCTTGACTGATCCTTAGTGAACCAATTCAGCTGGTTACGTGCATCAGTGGTTAGTG i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89988819 197 - 120129022 AAACCGCAGCAGTCAGGTAAGGACTG---TCATTTCTTCTCCACAAACAGGAATTTACTGGTT----TCCTTAACTG----------------GGCAGTGACACCTGGCTTCCTATGTTTCAGCTGGGGA-GGGTGTCCTTGCCCTGCCTG-AGAA---------------GGGGTGTCTGCAGACTGAC-ATAGTCCCTG---CCAAGAGATTATCTGGCATCCTGGATGAGCAGTTGGT- i mm10.chr12 C 0 C 0 e dasNov3.JH576208 1668186 2629 + 4416731 I a score=997026.000000 s hg38.chr2_KI270774v1_alt 91706 114 + 223625 GTACGGAGTTTTACAGGAGAATCTACTGCATAATTCATGAGGAAACTGAAACGCAAAAAAGATGTGT----------------------------------AGTTAAAG-------CCATGTGCTCCTGTGAGTGG----GTGGGCACGTGCA---GTCA----CT s panTro5.chr2A 1369286 114 + 111504155 GCACAGAGTTTTACAGGAGAATCTACTGCATAATTCATGAGGAAACTGAAACGCAAAAAAGATGTGT----------------------------------AGTTAAAG-------CCATGTGCTCCTGTGAGTGG----GTGGGCACGTGCT---GTCA----CT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1329372 114 + 114371477 GCACAGAGTTTTACAGGAGAATCTACTGCATAATTCATGAGGAAACTGAAACGCAAAAAAGATGTGT----------------------------------AGTTAAAG-------CCATGTGCTCCTGTGAGTGG----GTGGGCACGTGCA---GTCA----CT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1354462 114 + 1464242 GCACAGAGTTTTACAGGAGAATCTACTGCATAATTCATGAGGAAACTGAAACGCAAAAAAGATGTGT----------------------------------AGTTAAAG-------CCACGTGCTCCTGTGAGTGG----GTGGGCAGGTGCA---GTCA----CT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1079903 110 + 81552678 GCACAGAGTTTTACAGGAGAATCTACTGCATAGTTCATGAGGAAACTGAAACTCAAAAAAGATGTG--------------------------------------TAAAG-------CCATGTGCTCCTGTGAGTGG----GTGGGCATGTGCA---GTCA----CT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1410168 112 + 108979918 GCACAGAGTTTTACAGGAGAATCTACTGCATAGTTCATGAGGAAACTGGAACTCAAAAAGGATGTGT----------------------------------AGTCAAAG-------CCACATGCTCCTGTGAGTGG----GTGGGCACGTGCA---GTCA------ i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1382579 112 - 111193037 GCACAGAGTTTTACAGGAGAATCTACTGCATAGTTCATGAGGAAACTGGAACTCAAAAAGGATGTGT----------------------------------AGTCAAAG-------CCACATGCTCCTGTGAGTGG----GTGGGCACGTGCA---GTCA------ i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1410992 114 + 3644372 GCACAGAGTTTTACAGGAGAATCTACTGCATAGTTCATGAGGAAACTGGAACTCAAAAAGGATGTGT----------------------------------AGTCAAAG-------CCACATGCTCCTGTGAGTGG----GTGGGCACGTGCA---GTCACT---- i macNem1.NW_012011978v1 C 0 I 696 s cerAty1.NW_012000820v1 1364759 112 - 10304083 GCACAGAGTTTTACAGGAGAATCTACTGCATAGTTCATGAGGAAACTGGAACTCAAAAAGGATGTGT----------------------------------AGTCAAAG-------CCACATGCTCCTGTGAGTGG----GTGGGCACGTGCA---GTCA------ i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1439767 112 - 107702431 GCACAGAGTTTTACAGGAGAATCTACTGCATAGTTCATGAGGAAACTGGAACTCAAAAAGGATGTGT----------------------------------AGTCAAAG-------CCACATGCTCCTGTGAGTGG----GTGGACACGTGCA---GTCA------ i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 918420 112 - 2200435 GCACAGAGTTTTACAGGAGAATCTACTGCATAGTTCATGAGGAAACTGGAACTCAAAAAGGATGTGT----------------------------------AGTCAAAG-------CCACATGCTCCTGTGAGTGG----GTGGGCATGTGCA---GTCA------ i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1348786 114 - 13651311 GCATGGAGTTTTACAGGAGAATCTACTGCATAGTTCATGAGGAAACTGAAACTCAAAAAGGACGTGT----------------------------------AGTTAAAG-------CCACGTGCTCCTGTGAGTGG----GTGGACACGTGCA---GTCA--CT-- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1357037 112 - 108792865 GCACGGAGGTTTACAGGAGAATGTACTGCATAGGTCATGAAGAAACGAAAACTCGAAAAAGATGTGT----------------------------------AGTTAAAG--------CATGTGCTCCTGC-AGGTG----GTGGGCATGTGCA---GTCA----CT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1206456 101 - 7082604 GCACAGA-GTTCACAGGAGAATGTGCTGCATAGGTCATGAAGAAACTAAAACTCAAAAAAGACGTGT----------------------------------AGTTAAAG--------CATGTGCTCCTGC-AATGG----GTGGG-------------CA----CT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1294613 113 + 1864846 ACACGGAGGTTTACAGGAGAACGTGCTGCATAGGTCATGAAGAAACTAAAACTCAAAAAAGATGTGT----------------------------------AGTTAAAG--------CATGTGCTCCTGCAAGTGG----GTGGGCACGTGTG---GTCA----CT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 87012 113 + 287728 GCACAGAGGTTTACAGGAGAATGTACTGCATAGGTCATGAAGAAACTCAAACTCAAAAAAGATGTGT----------------------------------AGTTAAAG--------CATGTGCTCCTGAAAGTGG----GTGGGCACGTGCG---GTCA----CT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 924525 74 + 5252280 GCA-------------AAGGACGTACCAGGCAGTGCATAACGA-------------------------------------------------------------TAACA-------CCATGTGCTCCTGGAAGGTG----GCAGGAACGCCCC---CTTA----CT i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89989016 117 - 120129022 GTATCCAGCTAGAAGTGGGAGTGTACTAGGTATCTCATAAAGAAACAAAAACTTAACACTGCAGTGT----------------------------------AGTTGA-G-------CTGCATGTTGCTAAAAACTGGGATGGGGGAACTTTCT---ACCC----CT i mm10.chr12 C 0 I 13 s dasNov3.JH576208 1670815 158 + 4416731 GCACAGAGTTGCAGGTAAGACTATACAAGATATTTCAGGAAGAAATTGAAACCTGAAATATATGTATAAAATTACTCTTGATTTTAACTTTTAATATATCCAATTAAAGTTAAAATTCATATATTCCTGGAAGTTA----GAGTGAATGTATACGCCTCA----CA i dasNov3.JH576208 I 2629 C 0 a score=234695.000000 s hg38.chr2_KI270774v1_alt 91820 39 + 223625 CTG-CCTGCAATAGCAGA-GGCGGAAGAGCCGCAGA---------------GACCC- s panTro5.chr2A 1369400 39 + 111504155 CTG-CCTGCAATAGCAGA-GGCGGAAGAGCCGCAGA---------------GACCC- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1329486 39 + 114371477 CTG-CCTGCAATAGCAGA-GGCAGAAGAGCTGCAGA---------------GACCC- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1354576 39 + 1464242 CTG-CCTGCAACAGCAGA-GGCGGAAGAGCCGCAGA---------------GACCC- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1080013 39 + 81552678 CTG-CCTGCAATAGCAGA-GGCGGGAGAGCCACAGA---------------GACCC- i nomLeu3.chr19 C 0 I 11 s rheMac8.chr13 1410280 33 + 108979918 -----CTGCTATAGCAGA-GG--GAAGAGCCTCAGA---------------GACCC- i rheMac8.chr13 C 0 I 10 s macFas5.chr13 1382691 33 - 111193037 -----CTGCTATAGCAGA-GG--GAAGAGCCTCAGA---------------GACCC- i macFas5.chr13 C 0 I 10 s cerAty1.NW_012000820v1 1364871 33 - 10304083 -----CTGCTATAGCAGA-GG--GAAGAGCCTCAGA---------------GACCC- i cerAty1.NW_012000820v1 C 0 I 10 s chlSab2.chr14 1439879 33 - 107702431 -----CTGCTATAGCAGA-GG--GAAGAGCCTCAGA---------------GACCC- i chlSab2.chr14 C 0 I 10 s manLeu1.NW_012103754v1 918532 33 - 2200435 -----CTGCTATAGCAGA-GG--GAAGAGCCTCAGA---------------GACCC- i manLeu1.NW_012103754v1 C 0 I 10 s colAng1.NW_012118821v1 1348900 38 - 13651311 CTG-CCTGCAATAGCAGAGGG--GAAGAGCTGCAGA---------------GACCC- i colAng1.NW_012118821v1 C 0 I 10 s calJac3.chr14 1357149 39 - 108792865 CTG-CCTGCAATAGCAGT-GGCAGAAGAGCCACAGG---------------GACCC- i calJac3.chr14 C 0 I 10 s saiBol1.JH378218 1206557 39 - 7082604 CTG-CCTGCAACGGCAGT-GTTGGAAGAGCCGCAGG---------------GACCC- i saiBol1.JH378218 C 0 I 10 s cebCap1.NW_016107827v1 1294726 39 + 1864846 CTG-CCTGCCACTGCAGT-GGCGGAAGAGCCGCAGG---------------GACCC- i cebCap1.NW_016107827v1 C 0 I 162 s aotNan1.NW_018513311v1 87125 39 + 287728 CTG-CCTGCAAGAGCAGT-GGTCGAAGAGCCGCAGG---------------GACCC- i aotNan1.NW_018513311v1 C 0 I 10 s otoGar3.GL873658 924599 37 + 5252280 CTG-CCTCT--CAGTCAA-GGCCAGAGAGCCCCAGA---------------ACCCC- i otoGar3.GL873658 C 0 I 14 s mm10.chr12 89989146 53 - 120129022 CTG-CCTTCCACTGTGCC-AGATAAAGAG-TACAGAAAACAATTCCTTCTCGATCC- i mm10.chr12 I 13 C 0 s dasNov3.JH576208 1670973 56 + 4416731 CTATTTTTAAATAGCAAT-AGCCAAAGAGCCACAGAAAACTATATCCTCCCAACCCC i dasNov3.JH576208 C 0 C 0 e macNem1.NW_012011978v1 1411106 696 + 3644372 I a score=114275.000000 s hg38.chr2_KI270774v1_alt 91859 14 + 223625 GTGGGCTCAAGAAA s panTro5.chr2A 1369439 14 + 111504155 GTGGGCTCAAGAAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1329525 14 + 114371477 GTGGGCTCAAGAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1354615 14 + 1464242 GTGGGCTCAAGAAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1080063 14 + 81552678 CTGGGCTCAAGAAA i nomLeu3.chr19 I 11 C 0 s rheMac8.chr13 1410323 14 + 108979918 GTGAGCTCAAGAAA i rheMac8.chr13 I 10 C 0 s macFas5.chr13 1382734 14 - 111193037 GTGAGCTCAAGAAA i macFas5.chr13 I 10 C 0 s cerAty1.NW_012000820v1 1364914 14 - 10304083 GTGGGCTCAAGAAA i cerAty1.NW_012000820v1 I 10 C 0 s chlSab2.chr14 1439922 14 - 107702431 GTGGGCTCAAGAAA i chlSab2.chr14 I 10 C 0 s manLeu1.NW_012103754v1 918575 14 - 2200435 GTGGGCTCAAGAAA i manLeu1.NW_012103754v1 I 10 C 0 s colAng1.NW_012118821v1 1348948 14 - 13651311 GTGGGCTCAGGAAA i colAng1.NW_012118821v1 I 10 C 0 s calJac3.chr14 1357198 14 - 108792865 TTGTGCCCAAGGAG i calJac3.chr14 I 10 C 0 s saiBol1.JH378218 1206606 14 - 7082604 TTGTGCTCAAGGAG i saiBol1.JH378218 I 10 C 0 s aotNan1.NW_018513311v1 87174 14 + 287728 TTGTGCTCAAGAAG i aotNan1.NW_018513311v1 I 10 C 0 s otoGar3.GL873658 924650 14 + 5252280 CAGAGCTCAAGGAA i otoGar3.GL873658 I 14 I 62 s mm10.chr12 89989199 14 - 120129022 TAGTACTCAGGGTA i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1671029 14 + 4416731 TTGTTTTCAAGAAA i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1294765 162 + 1864846 I e macNem1.NW_012011978v1 1411106 696 + 3644372 I a score=21898.000000 s hg38.chr2_KI270774v1_alt 91873 4 + 223625 AGTA-- s panTro5.chr2A 1369453 4 + 111504155 AGTA-- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1329539 4 + 114371477 AGTA-- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1354629 4 + 1464242 AGTA-- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1080077 4 + 81552678 AGTA-- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1410337 4 + 108979918 AGCA-- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1382748 4 - 111193037 AGCA-- i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1364928 4 - 10304083 AGCA-- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1439936 4 - 107702431 AGCA-- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 918589 4 - 2200435 AGCA-- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1348962 4 - 13651311 AGCA-- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1357212 4 - 108792865 AGTA-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1206620 4 - 7082604 CGTA-- i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 87188 4 + 287728 AGCA-- i aotNan1.NW_018513311v1 C 0 I 37 s mm10.chr12 89989213 4 - 120129022 AGTG-- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1671043 4 + 4416731 --TATA i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1294765 162 + 1864846 I e otoGar3.GL873658 924664 62 + 5252280 I e macNem1.NW_012011978v1 1411106 696 + 3644372 I a score=-48365.000000 s hg38.chr2_KI270774v1_alt 91877 3 + 223625 C--------------------------------------A---------------------------T--------- s gorGor5.CYUI01015607v1 1354633 3 + 1464242 C--------------------------------------A---------------------------T--------- i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1410341 4 + 108979918 C-------------------------------------AA---------------------------T--------- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1382752 7 - 111193037 Catt----------------------------------aa---------------------------t--------- i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1364932 3 - 10304083 C--------------------------------------A---------------------------T--------- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1439940 30 - 107702431 C--------------------------------------attaattaattaattaatnnnnnnnnnnt--------- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 918593 3 - 2200435 C--------------------------------------A---------------------------T--------- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1348966 3 - 13651311 C--------------------------------------A---------------------------T--------- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1357216 1 - 108792865 -------------------------------------------------------------------T--------- i calJac3.chr14 C 0 I 37 s saiBol1.JH378218 1206624 1 - 7082604 -------------------------------------------------------------------T--------- i saiBol1.JH378218 C 0 I 27 s mm10.chr12 89989217 2 - 120129022 ------------------------------------------------------------------CT--------- i mm10.chr12 C 0 I 11 s dasNov3.JH576208 1671047 48 + 4416731 --TCAGGTGGGTTGGTGTGAGAGGGTGGAGGTGCTTAGAA---------------------------TCAAAAGGGT i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 87192 37 + 287728 I e cebCap1.NW_016107827v1 1294765 162 + 1864846 I e otoGar3.GL873658 924664 62 + 5252280 I e macNem1.NW_012011978v1 1411106 696 + 3644372 I e nomLeu3.chr19 1080081 0 + 81552678 C e panPan2.chr2A 1329543 0 + 114371477 C e panTro5.chr2A 1369457 0 + 111504155 C a score=28364.000000 s hg38.chr2_KI270774v1_alt 91880 10 + 223625 TCATTAATTA--- s panTro5.chr2A 1369457 9 + 111504155 -CATTAATTA--- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1329543 9 + 114371477 -CATTAATTA--- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1354636 10 + 1464242 TAATTAATTC--- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1080081 9 + 81552678 -CATTAATTA--- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1410345 10 + 108979918 TAATTAATTA--- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1382759 10 - 111193037 taattaatta--- i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1364935 10 - 10304083 TAATTAATTA--- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1439970 10 - 107702431 taattaatta--- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 918596 10 - 2200435 TAATTAATTA--- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1348969 10 - 13651311 TAATTAATTA--- i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1206652 6 - 7082604 AAAGTA------- i saiBol1.JH378218 I 27 I 4 s mm10.chr12 89989230 10 - 120129022 CAGTCAGTTT--- i mm10.chr12 I 11 I 30 s dasNov3.JH576208 1671095 10 + 4416731 ---TCAATAGCAG i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 87192 37 + 287728 I e cebCap1.NW_016107827v1 1294765 162 + 1864846 I e otoGar3.GL873658 924664 62 + 5252280 I e calJac3.chr14 1357217 37 - 108792865 I e macNem1.NW_012011978v1 1411106 696 + 3644372 I a score=10920.000000 s hg38.chr2_KI270774v1_alt 91890 1 + 223625 A s panTro5.chr2A 1369466 1 + 111504155 A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1329552 1 + 114371477 A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1354646 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1080090 1 + 81552678 A i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1410355 1 + 108979918 A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1382769 1 - 111193037 a i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1364945 1 - 10304083 A i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1439980 1 - 107702431 a i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 918606 1 - 2200435 A i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1348979 1 - 13651311 A i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1357254 1 - 108792865 A i calJac3.chr14 I 37 C 0 s saiBol1.JH378218 1206662 1 - 7082604 A i saiBol1.JH378218 I 4 C 0 s aotNan1.NW_018513311v1 87229 1 + 287728 A i aotNan1.NW_018513311v1 I 37 C 0 s mm10.chr12 89989270 1 - 120129022 A i mm10.chr12 I 30 C 0 s dasNov3.JH576208 1671105 1 + 4416731 A i dasNov3.JH576208 C 0 I 3 e cebCap1.NW_016107827v1 1294765 162 + 1864846 I e otoGar3.GL873658 924664 62 + 5252280 I e macNem1.NW_012011978v1 1411106 696 + 3644372 I a score=548078.000000 s hg38.chr2_KI270774v1_alt 91891 80 + 223625 TTAATCTTATAACATAA------AAACTTTTGATGT-T-CAATCGGCCTACTCAGACATTCCTCACC----AAATAGAAGTAGGAAGGACAC s panTro5.chr2A 1369467 80 + 111504155 TTAATCTTATAACATAA------AAACTTTTGATGT-T-CAATCGGCCTACTCAGACATTCCTCACC----ATATAGAAGTAGGAAGGACAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1329553 80 + 114371477 TTAATCTTATAACATAA------AAACTTTTGATGT-T-CAATCGGCCTACTCAGACATTCCTCACC----ATATAGAAGTAGGAAGGACAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1354647 75 + 1464242 TTAATCTT-----ATAC------AAACTTTTGACGT-T-CAATCGGCCTACTCAGACATTCCTCACC----ATATAGAAGTAGGAAGGACAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1080091 80 + 81552678 TTAATTTTATAACATAA------AAACTTCTGGTGT-T-CAATCGGCCTACTCAGACACTCCTCACA----ATATGGAAGTAGGAAGGACAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1410356 82 + 108979918 TGAATTTTATAACATAAA-----AAACTTCTGGTGT-TCCAATCGGTCTACTCAGACATTCCTCACA----ATATGGAGGTAGGAGGGACAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1382770 82 - 111193037 ttaattTTATAACATAAA-----AAACTTCTGGTGT-TCCAATCGGTCTACTCAGACATTCCTCACA----ATATGGAGGTAGGAGGGACAC i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1364946 82 - 10304083 TTAATTTTATAACATAAA-----AAACTTCTGGTGT-TCCAATCGGTCCACTCAGACATTCCTCACA----ATATGGAGGTAGGAAGGACAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1439981 82 - 107702431 ttaattTTATAACATAAA-----AAACTTCTGGTGT-TCCAATCGGCCTACTCAGACATTCCTCACA----ATATGGAGGTAGGAAGGACAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 918607 82 - 2200435 TTAATTTTATAACATAAA-----AAACTTCTGGTGT-TCCAATCGGTCTACTCAGACATTCCTCACA----ATATGGAGGTAGGAAGGACAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1348980 82 - 13651311 TTAATTTTATAACATAAG-----AAACTTCTGGTGT-TTCAATAGGTCTACTCAGACATTCCTCACA----ATATGGAGGTAGGAAGGACGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1357255 77 - 108792865 TTGATTTTATACCATAAA-----AAACTTCTGGTGT-TCCAGTC-----ATTCATACATTCCCCACA----ATATGGAATTAGGAGGGACGT i calJac3.chr14 C 0 I 16 s saiBol1.JH378218 1206663 81 - 7082604 TTGATTTTATAACAT-AA-----AAGCTTCTGGTGT-TCCAATCGTCCTATTCATACATTCCCCACA----ATATGGAATGAGGAGGAACAT i saiBol1.JH378218 C 0 I 16 s aotNan1.NW_018513311v1 87230 82 + 287728 TTAATTTTATAACATAAA-----AAACTTCCGGTGT-TCCAGTCGTCCTATTCATACATTCCCCACA----ATATGGAATTAGGAGGGACAT i aotNan1.NW_018513311v1 C 0 I 16 s otoGar3.GL873658 924726 76 + 5252280 TTGACTTGATAACATGAG-----AAGCTTCCAGTCC-T----------TATGGTTATGTTCCTCATAATTTATGTGGAACAGAAAAAAATGT i otoGar3.GL873658 I 62 I 6 s mm10.chr12 89989271 70 - 120129022 TGACTCTAATAGTATACGGATTCATATTTCCAAAATATCCACTTGATCT----------------------CTATGGTTATAGGAGAGACCC i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1671109 78 + 4416731 TTAGTTTTATAATATAAA-----ATACTTCCAGTAT-T----TCATCATATTCACAAACACCTTACA----ATTTGTAAGTAGGAGGAACAT i dasNov3.JH576208 I 3 C 0 e cebCap1.NW_016107827v1 1294765 162 + 1864846 I e macNem1.NW_012011978v1 1411106 696 + 3644372 I a score=798638.000000 s hg38.chr2_KI270774v1_alt 91971 94 + 223625 -----------------GGGGAAATG--------------CAACTTTTCAATGAAGCATCCATCGGCAATTTAATGCCTTGTTTTGTCCACTTTTCCTTCTTGTGAAGAG----T--GTAATGTCGAAGTT s panTro5.chr2A 1369547 94 + 111504155 -----------------CGGGAAATG--------------CAACTTTTCAATGAAGCATCCATCAGCAATTTAATGCCTTGTTTTGTCCACTTTTCCTTCTTGTGAAGAG----T--GTAATGTCGAAGTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1329633 94 + 114371477 -----------------CGGGAAATG--------------CAACTTTTCAATGAAGCATCCATCAGCAATTTAATGCCTTGTTTTGTCCACTTTTCCTTCTTGTGAAGAG----T--GTAATGTCGAAGTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1354722 94 + 1464242 -----------------CGGGAAATG--------------CAACTTTTCAATGAAGCATCCATCAGCAATTTAATGCCTTGTTTTGTCCACTTTTCCTTCTTGTGAAGAG----T--GTAATGTCGAAGTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1080171 92 + 81552678 -----------------AGGGAAATG--------------CAACTTTTCAATGATGTATCCATCAGCAATTTAACGTCTTGTTTTGTCCACTTTTTCTTCTTGTGA--AG----T--GTAATGTCGAAGTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1410438 94 + 108979918 -----------------AGGGAAATG--------------TAACTTTCCAACGATGCATCCATCAGCAATTTAACACCTCGTTTTGTCCACTTTTCCTTCTTGTGAAGAG----G--GTAATGTCAAAGTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1382852 94 - 111193037 -----------------AGGGAAATG--------------TAACTTTCCAACGATGCATCCATCAGCAATTTAACACCTCGTTTTGTCCACTTTTCCTTCTTGTGAAGAG----G--GTAATGTCAAAGTT i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1365028 94 - 10304083 -----------------AGGGAAATG--------------TAACTTTCCAACGATGCATCCATCAGCAATTTAACACCTCGTTTTGTCCACTTTTCCTTCTTGTGAAGAG----G--GTAATGTCAAAGTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1440063 94 - 107702431 -----------------AGGGAAATG--------------CAACTTTCCAACGATGCATCCATCAGCAATTTAACACCTCGTTTTGTCCACTTTTCCTTCTTGTGAAGAG----G--GTAATGTCAAAGTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 918689 94 - 2200435 -----------------AGGGAAATG--------------TAACTTTCCAACGATGCATCCATCAGCAATTTAACACCTCGTTTTGTCCACTTTTCCTTCTTGTGAAGAG----G--GTAATGTCAAAGTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1349062 94 - 13651311 -----------------AGGGAAATG--------------CAACTTTCCAACGATGCATCCATCAGCAATTTAACGCCTCGTTTTGTCCACTTTTCCTTCTTGTGAAGAG----G--GTAATGTCAAAGTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1357348 94 - 108792865 -----------------AGGGAAAAG--------------CAACTTTTCAACGCTGCATCCAACAGCAATTTAATGCCTGGTTCTGTCCAGTCTTCCTTCTTGTGAAGAG----T--GTGATGTTGAAGTT i calJac3.chr14 I 16 I 270 s saiBol1.JH378218 1206760 94 - 7082604 -----------------GGGGAAAAG--------------CAACTTTTCAACGCTGCGTCCATCAGCAGTTTAAAGCCTCGTTCCATCCAGTCTTCCTTCTTGTGAAGGG----T--GTAATGTTGAAGTT i saiBol1.JH378218 I 16 C 0 s cebCap1.NW_016107827v1 1294927 92 + 1864846 -----------------GGGGAAAAG--------------CAACTTTCCAACGCTGCGTCCATCAGCAATTTAACGCCTCGCTCTGTC--GTCTTCCTTCTTGTGACGAG----T--GTAATGTTGAAGTT i cebCap1.NW_016107827v1 I 162 C 0 s aotNan1.NW_018513311v1 87328 94 + 287728 -----------------AGGAAAAAG--------------CAACTTTTCAACGCTGCATCCATCAGCAATTTAACGCCTCGCTCTGTCCAGTCTTCCTTCCTGTGAAGAG----T--GCAATGTTGAAGTT i aotNan1.NW_018513311v1 I 16 C 0 s otoGar3.GL873658 924808 95 + 5252280 -----------------TGGAAAAAG--------------AAACGCTTCGATGATACAT-AACTTGCAGTTAAAGGCCTTGTTTCATCTACCTGCCTTTGTTTCAAAGAC----TTCGTAAGGTCTAAATC i otoGar3.GL873658 I 6 C 0 s mm10.chr12 89989341 93 - 120129022 -----------------ATGAAAATGGAAAGCTACAGAATGAACTCTTTGCTGACGTGTGAACTGGATATTAAGCCCCTTCTTTTGTCCACTTTGTCTT--TGTGAAAAC----T--G------------- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1671187 109 + 4416731 AAGAAACTGTGAATCAAGGGAAAAAA--------------TAGTTTAGTGATAGAATTCCTAT------TTAAATTCCTTCTTTTGCCTAACTTTCCTTGTTGTATAAAAACTTT--GTAACATTGAAACT i dasNov3.JH576208 C 0 C 0 e macNem1.NW_012011978v1 1411106 696 + 3644372 I a score=182241.000000 s hg38.chr2_KI270774v1_alt 92065 20 + 223625 AGAGCCACATCTCCACCTTT s panTro5.chr2A 1369641 20 + 111504155 AGAGCCACATCTCCACCTTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1329727 20 + 114371477 AGAGCCACATCTCCACCTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1354816 20 + 1464242 AGAGCCACATCTCCACCTTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1080263 20 + 81552678 AGAGCCACATCTCCACTTTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1410532 20 + 108979918 AGGGCCACATCTCCACTTTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1382946 20 - 111193037 AGGGCCACATCTCCACTTTT i macFas5.chr13 C 0 I 335 s cerAty1.NW_012000820v1 1365122 20 - 10304083 AGGGCCACATCTCCACTTTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1440157 20 - 107702431 AGGGCCACATCTCCACTTTT i chlSab2.chr14 C 0 I 375 s manLeu1.NW_012103754v1 918783 20 - 2200435 AGGGCCACATCTCCACTTTT i manLeu1.NW_012103754v1 C 0 I 333 s colAng1.NW_012118821v1 1349156 20 - 13651311 AGGGCCACATCTCCACTTTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1357712 20 - 108792865 aaagtgACTTCTCCACTTTT i calJac3.chr14 I 270 C 0 s saiBol1.JH378218 1206854 20 - 7082604 AGAGCCACTTCTCCACATTT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1295019 20 + 1864846 AGAGCCACTTCTCCACTTTT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 87422 20 + 287728 AGAGCCACGTCTCCACCTTT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 924903 18 + 5252280 -AGATCCCATCTCTGTTTT- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89989434 9 - 120129022 -----------TCTATCTTC i mm10.chr12 C 0 I 1 s dasNov3.JH576208 1671296 20 + 4416731 AGATGTAAATCTTCACTTTT i dasNov3.JH576208 C 0 C 0 e macNem1.NW_012011978v1 1411106 696 + 3644372 I a score=159812.000000 s hg38.chr2_KI270774v1_alt 92085 15 + 223625 -AGAAAGACGTGGCTG s panTro5.chr2A 1369661 15 + 111504155 -AGAAAGACGTGGCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1329747 15 + 114371477 -AGAAAGACGTGGCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1354836 15 + 1464242 -AGAAAGACGTGGCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1080283 15 + 81552678 -AGAAAGATGTGGCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1410552 15 + 108979918 -AGAAAGACTTAGCTG i rheMac8.chr13 C 0 I 337 s macFas5.chr13 1383301 15 - 111193037 -agaaaGACGTGGCTG i macFas5.chr13 I 335 C 0 s cerAty1.NW_012000820v1 1365142 15 - 10304083 -AGAAAGACTTAGCTG i cerAty1.NW_012000820v1 C 0 I 328 s chlSab2.chr14 1440552 15 - 107702431 -AGAAAGACGTGGCTG i chlSab2.chr14 I 375 C 0 s manLeu1.NW_012103754v1 919136 15 - 2200435 -AGAAAGACGTGGCTG i manLeu1.NW_012103754v1 I 333 C 0 s colAng1.NW_012118821v1 1349176 15 - 13651311 -AGAAAGACGTGGCTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1357732 15 - 108792865 -AAAAAGACATGGCTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1206874 15 - 7082604 -AGAAAGATGTGGCTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1295039 15 + 1864846 -AGAAAGACGTGGCTG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 87442 15 + 287728 -AGAAAGACGTGGCTG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 924921 15 + 5252280 -GGGGAAATGTGGTTG i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89989444 15 - 120129022 -AAAGCAACATGGCCA i mm10.chr12 I 1 C 0 s dasNov3.JH576208 1671316 16 + 4416731 AGAAAAAATGTGGTTG i dasNov3.JH576208 C 0 C 0 e macNem1.NW_012011978v1 1411106 696 + 3644372 I a score=13923.000000 s hg38.chr2_KI270774v1_alt 92100 1 + 223625 A s panTro5.chr2A 1369676 1 + 111504155 A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1329762 1 + 114371477 A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1354851 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1080298 1 + 81552678 A i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1410904 1 + 108979918 A i rheMac8.chr13 I 337 C 0 s macFas5.chr13 1383316 1 - 111193037 A i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1365485 1 - 10304083 A i cerAty1.NW_012000820v1 I 328 C 0 s chlSab2.chr14 1440567 1 - 107702431 A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 919151 1 - 2200435 A i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1349191 1 - 13651311 A i colAng1.NW_012118821v1 C 0 M 1083 s calJac3.chr14 1357747 1 - 108792865 A i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1206889 1 - 7082604 A i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1295054 1 + 1864846 A i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 87457 1 + 287728 A i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 924936 1 + 5252280 A i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89989459 1 - 120129022 A i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1671332 1 + 4416731 A i dasNov3.JH576208 C 0 C 0 e macNem1.NW_012011978v1 1411106 696 + 3644372 I a score=609588.000000 s hg38.chr2_KI270774v1_alt 92101 89 + 223625 AATGTCTGAAGGGCAGGAGAGGTGA--CCCTTGGTG-AGAAGATGGCTCTTTGCTGATATAAGTCACCCCCGATGG-CATGGGTCCCT-GGTCA s panTro5.chr2A 1369677 89 + 111504155 AATGTCTGAAGGGCAGGAGAGGTGA--CCCTTGGTG-AGAAGATGGCTCTTTGCTGGTATAAGTCACCCCCGATGG-CATGGGTCCCT-GGTCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1329763 89 + 114371477 AATGTCTGAAGGGCAGGAGAGGTGA--CCCTTGGTG-AGAAGATGGCTCTTTGCTGGTATAAGTCACCCCCGATGG-CGTGGGTCCCT-GGTCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1354852 88 + 1464242 AATGTCTGAAGGGCAGGAGAGGTGA--CCCTTGGTG-AGAAGATGGCTCTTTGCTGGTATAAGTCA-CCCCGATGG-CGTGGGTCCCT-GGTCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1080299 89 + 81552678 AATGTCTGAAGGGCAGGAGAGGTTA--CCCTTGGTG-AGAAGACGGCTCTTTGCTGGCACAAGTCACCCCCGATGG-CGTGGGTCCCT-GGTCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1410905 88 + 108979918 AATGTCTGAAGGACAGGAGAGGTGA--CTCTTGATG-AGAAGCTAGCTCTTTGCTGGCATAATTCA-CCCTGATGG-TGTGGGTCCCT-GGTCA i rheMac8.chr13 C 0 I 1 s macFas5.chr13 1383317 88 - 111193037 AATGTCTGAAGGGCAGGAGAGGTGA--CTCTTGATG-AGAAGCTAGCTCTTTGCTGGCATAATTCA-CCCTGATGG-TGTGGGTCCCT-GGTCA i macFas5.chr13 C 0 I 1 s cerAty1.NW_012000820v1 1365486 81 - 10304083 AATGTCTGAAGGGCAGGAGAGGTGA--CTCTTGATG-AGAAGCTA-------GCTGGCATAATTCA-CCCTGATGG-TGTGGGTCCCT-GGTCA i cerAty1.NW_012000820v1 C 0 I 1 s chlSab2.chr14 1440568 88 - 107702431 AATGTCTGAAGGGCAGGAGAGGTGA--CCCTTGGTG-AGAAGATGGCTCTTTGCTGGCGTAATTCA-CCCCAATGG-TGTGGGTCCCT-GGTCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 919152 88 - 2200435 AATGTCTGAAGGGCAGGAGAGGTGA--CTCTTGATG-AGAAGCTAGCTCTTTGCTGGCATAATTCA-CCCTGACGG-TGTGGGTCCCT-GGTCA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1357748 89 - 108792865 AACGTCTAAAGGTCAGGAGAGTTGA--CCTGTTGTG-AGAAGATGGCTCTTTGCTGGCATACGTCGCCCCTGTTGG-TGTGGGTCCCT-GGTCG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1206890 89 - 7082604 AACGTCTGAAGGTCAGGAGAGTTGA--CCCGTGGTG-AGAAGATGGCTCTTTGCCGGCATACGTCACCCCTGCTGC-TGTGGGTCCCT-GGTCA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1295055 89 + 1864846 AACGTCTGAAGGCCAGGAGAGTTGA--CCCGTGGTG-AGAAGATGGCTCTTTGCCGGCATACGTCACCCCTGCTGG-TGTGGGTCCCT-GGTCA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 87458 88 + 287728 AACGTCTGAAGGTCAGGAGAGTTGA--CCCGTGGTG-AGAAGATGGCTCTTTGCCGGCACACGTCACCCCTGCTGG-CGTGGGTCCCT-GGTC- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 924937 67 + 5252280 AATGCCGGAAGGGCA--------------------G-AGAAGACGGCTCTAT---GGTATAAAAGTTCCGGGATGA-GGCTGATCCCT--GTCA i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89989460 83 - 120129022 CATGGCTACACGTCAGCGGAACCTAACACCATGCTG-AGAAGATGACTCTGGGTGGGTATGGCATATTCTGAAT---------TCCCA-GATGA i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1671333 86 + 4416731 GTTGTCTAAAGAGCTAGAAAGTTAA--CCCTTTGTATATAAGATGGCTTTTTGGTG----AACTC--TCAGGATGATTTTGAATCCCTAAATCA i dasNov3.JH576208 C 0 C 0 e colAng1.NW_012118821v1 1349192 1083 - 13651311 M e macNem1.NW_012011978v1 1411106 696 + 3644372 I a score=259971.000000 s hg38.chr2_KI270774v1_alt 92190 32 + 223625 --GG-AGGC-TGTTTTACATCCTTAGCTTGTAGAAA s panTro5.chr2A 1369766 32 + 111504155 --GG-AGGC-TGTTTTACATCCTTAGCTTGTAGAAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1329852 32 + 114371477 --GG-AGGC-TGTTTTACATCCTTAGCTTGTAGAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1354940 32 + 1464242 --GG-AGGC-TGTTTTACATCCTTAGCTTGTAGAAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1080388 32 + 81552678 --GG-AGGC-TGTTTTACATCCTTAGCTTGTAAAAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1410994 32 + 108979918 --GA-AGAC-TGTTTTATGTCCTTAGCTTGTAGAAA i rheMac8.chr13 I 1 C 0 s macFas5.chr13 1383406 32 - 111193037 --GA-AGAC-TGTTTTATGTCCTTAGCTTGTAGAAA i macFas5.chr13 I 1 C 0 s macNem1.NW_012011978v1 1411802 32 + 3644372 --GG-AGAC-TGTTTTATGTCCTTAGCTTGTAGAAA i macNem1.NW_012011978v1 I 696 C 0 s cerAty1.NW_012000820v1 1365568 32 - 10304083 --GA-AGAC-TGTTTTATGTCCTTAGCTTGTAGAAA i cerAty1.NW_012000820v1 I 1 C 0 s chlSab2.chr14 1440656 32 - 107702431 --GG-AGAC-TGTTTTATGTACTTAGCTTGTAGAAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 919240 33 - 2200435 --GGAAGAC-TGTTTTATGTCCTTAGCTTGTAGAAA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1357837 32 - 108792865 --GG-AGAC-CGTTTCACGTCATTAGCTTATAGAAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1206979 31 - 7082604 --GG-AGA--CGTTTCAGGTCATTAGCTTATGGAAA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1295144 32 + 1864846 --GG-AGAC-CATTTCACGTCATTAGCTTATAGAAA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 87546 30 + 287728 -----AGAC-CGTTCCACGTCATTAGCTTATAGAAA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 925004 33 + 5252280 --GG-GGACTTGCTCTGGGTCCTGAGCTTGTGGACG i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89989543 30 - 120129022 -----GAGT-CACTGTATAGCTTTGGCTCACAGAAA i mm10.chr12 C 0 I 257 s dasNov3.JH576208 1671419 32 + 4416731 AGAG-AGCC-CACTTTAC--TATTAGTTTAAAGAAA i dasNov3.JH576208 C 0 C 0 e colAng1.NW_012118821v1 1349192 1083 - 13651311 M a score=154243.000000 s hg38.chr2_KI270774v1_alt 92222 15 + 223625 CGCGAAGCACAGGGG s panTro5.chr2A 1369798 15 + 111504155 TGTGAAGCACAGGGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1329884 15 + 114371477 TGCGAAGCACAGGGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1354972 15 + 1464242 CGCGAAGCACAGGGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1080420 15 + 81552678 TGCGAAGCACAGGGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1411026 15 + 108979918 CGCGAAGCACAGGGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1383438 15 - 111193037 CGCGAAGCACAGGGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1411834 15 + 3644372 CGCGAAGCACAGGGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1365600 15 - 10304083 CGCGAAGCACAGGGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1440688 15 - 107702431 CACGAAGCACAGGGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 919273 15 - 2200435 CGCGAAGCACAGGGG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1357869 15 - 108792865 CGTGAGGCACAGGGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1207010 15 - 7082604 CGCGAGGCACAGGGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1295176 15 + 1864846 CATGAGGCACAGGGG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 87576 15 + 287728 CGCGAGGCACAGGGG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 925037 15 + 5252280 TGGGAATCACAGTGG i otoGar3.GL873658 C 0 I 360 s dasNov3.JH576208 1671451 15 + 4416731 TGAAAAGCCCAGTGG i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89989573 257 - 120129022 I e colAng1.NW_012118821v1 1349192 1083 - 13651311 M a score=2655.000000 s hg38.chr2_KI270774v1_alt 92237 1 + 223625 -A s panTro5.chr2A 1369813 1 + 111504155 -A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1329899 1 + 114371477 -A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1354987 1 + 1464242 -A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1080435 1 + 81552678 -A i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1411041 1 + 108979918 -A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1383453 1 - 111193037 -A i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1411849 1 + 3644372 -A i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1365615 1 - 10304083 -A i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1440703 1 - 107702431 -A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 919288 1 - 2200435 -A i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1357884 1 - 108792865 -A i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1207025 1 - 7082604 -A i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1295191 1 + 1864846 -A i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 87591 1 + 287728 -A i aotNan1.NW_018513311v1 C 0 I 323 s dasNov3.JH576208 1671466 1 + 4416731 T- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89989573 257 - 120129022 I e otoGar3.GL873658 925052 360 + 5252280 I e colAng1.NW_012118821v1 1349192 1083 - 13651311 M a score=9555.000000 s hg38.chr2_KI270774v1_alt 92238 1 + 223625 A s panTro5.chr2A 1369814 1 + 111504155 A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1329900 1 + 114371477 A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1354988 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1080436 1 + 81552678 A i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1411042 1 + 108979918 A i rheMac8.chr13 C 0 I 330 s macFas5.chr13 1383454 1 - 111193037 A i macFas5.chr13 C 0 I 326 s macNem1.NW_012011978v1 1411850 1 + 3644372 A i macNem1.NW_012011978v1 C 0 I 375 s cerAty1.NW_012000820v1 1365616 1 - 10304083 A i cerAty1.NW_012000820v1 C 0 I 465 s chlSab2.chr14 1440704 1 - 107702431 A i chlSab2.chr14 C 0 I 311 s manLeu1.NW_012103754v1 919289 1 - 2200435 A i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1357885 1 - 108792865 A i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1207026 1 - 7082604 A i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1295192 1 + 1864846 A i cebCap1.NW_016107827v1 C 0 I 309 s dasNov3.JH576208 1671467 1 + 4416731 A i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 87592 323 + 287728 I e mm10.chr12 89989573 257 - 120129022 I e otoGar3.GL873658 925052 360 + 5252280 I e colAng1.NW_012118821v1 1349192 1083 - 13651311 M a score=-1278.000000 s hg38.chr2_KI270774v1_alt 92239 4 + 223625 -TGGT s panTro5.chr2A 1369815 4 + 111504155 -TGGT i panTro5.chr2A C 0 I 328 s panPan2.chr2A 1329901 4 + 114371477 -TGGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1354989 4 + 1464242 -TGGT i gorGor5.CYUI01015607v1 C 0 I 730 s nomLeu3.chr19 1080437 4 + 81552678 -TGGC i nomLeu3.chr19 C 0 I 325 s macFas5.chr13 1383781 1 - 111193037 ----t i macFas5.chr13 I 326 I 3 s manLeu1.NW_012103754v1 919290 4 - 2200435 -GGGT i manLeu1.NW_012103754v1 C 0 I 326 s calJac3.chr14 1357886 4 - 108792865 -GGGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1207027 4 - 7082604 -GGGC i saiBol1.JH378218 C 0 C 0 s dasNov3.JH576208 1671468 4 + 4416731 TTGA- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 87592 323 + 287728 I e mm10.chr12 89989573 257 - 120129022 I e cebCap1.NW_016107827v1 1295193 309 + 1864846 I e otoGar3.GL873658 925052 360 + 5252280 I e colAng1.NW_012118821v1 1349192 1083 - 13651311 M e chlSab2.chr14 1440705 311 - 107702431 I e cerAty1.NW_012000820v1 1365617 465 - 10304083 I e macNem1.NW_012011978v1 1411851 375 + 3644372 I e rheMac8.chr13 1411043 330 + 108979918 I a score=17169.000000 s hg38.chr2_KI270774v1_alt 92243 3 + 223625 GTC s panTro5.chr2A 1370147 3 + 111504155 GTC i panTro5.chr2A I 328 C 0 s panPan2.chr2A 1329905 3 + 114371477 GTC i panPan2.chr2A C 0 I 292 s gorGor5.CYUI01015607v1 1355723 3 + 1464242 GTC i gorGor5.CYUI01015607v1 I 730 C 0 s nomLeu3.chr19 1080766 3 + 81552678 GTC i nomLeu3.chr19 I 325 C 0 s rheMac8.chr13 1411373 3 + 108979918 GTC i rheMac8.chr13 I 330 C 0 s macFas5.chr13 1383785 3 - 111193037 GTC i macFas5.chr13 I 3 C 0 s macNem1.NW_012011978v1 1412226 3 + 3644372 GTC i macNem1.NW_012011978v1 I 375 C 0 s cerAty1.NW_012000820v1 1366082 3 - 10304083 GTC i cerAty1.NW_012000820v1 I 465 C 0 s manLeu1.NW_012103754v1 919620 3 - 2200435 GTC i manLeu1.NW_012103754v1 I 326 C 0 s calJac3.chr14 1357890 3 - 108792865 ATC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1207031 3 - 7082604 ATC i saiBol1.JH378218 C 0 I 288 s dasNov3.JH576208 1671472 3 + 4416731 ATT i dasNov3.JH576208 C 0 I 28 e aotNan1.NW_018513311v1 87592 323 + 287728 I e mm10.chr12 89989573 257 - 120129022 I e cebCap1.NW_016107827v1 1295193 309 + 1864846 I e otoGar3.GL873658 925052 360 + 5252280 I e colAng1.NW_012118821v1 1349192 1083 - 13651311 M e chlSab2.chr14 1440705 311 - 107702431 I a score=9690.000000 s hg38.chr2_KI270774v1_alt 92246 2 + 223625 CC s panTro5.chr2A 1370150 2 + 111504155 CC i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1355726 2 + 1464242 CC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1080769 2 + 81552678 CC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1411376 2 + 108979918 CC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1383788 2 - 111193037 CC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1412229 2 + 3644372 CC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1366085 2 - 10304083 CC i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 919623 2 - 2200435 CC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1357893 2 - 108792865 TC i calJac3.chr14 C 0 I 288 s dasNov3.JH576208 1671503 2 + 4416731 CC i dasNov3.JH576208 I 28 C 0 e aotNan1.NW_018513311v1 87592 323 + 287728 I e mm10.chr12 89989573 257 - 120129022 I e saiBol1.JH378218 1207034 288 - 7082604 I e cebCap1.NW_016107827v1 1295193 309 + 1864846 I e otoGar3.GL873658 925052 360 + 5252280 I e colAng1.NW_012118821v1 1349192 1083 - 13651311 M e chlSab2.chr14 1440705 311 - 107702431 I e panPan2.chr2A 1329908 292 + 114371477 I a score=892.000000 s hg38.chr2_KI270774v1_alt 92248 7 + 223625 ----------------------------------------------------------------CAGAGTC----- s panTro5.chr2A 1370152 7 + 111504155 ----------------------------------------------------------------CAGAGTC----- i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1355728 7 + 1464242 ----------------------------------------------------------------CAGAGTC----- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1080771 7 + 81552678 ----------------------------------------------------------------CAGAGTC----- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1411378 7 + 108979918 ----------------------------------------------------------------CAGAGCC----- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1383790 7 - 111193037 ----------------------------------------------------------------CAGAGCC----- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1412231 7 + 3644372 ----------------------------------------------------------------CGGAGCC----- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1366087 7 - 10304083 ----------------------------------------------------------------CAGAGCC----- i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 919625 7 - 2200435 ----------------------------------------------------------------CAGAGCC----- i manLeu1.NW_012103754v1 C 0 C 0 s dasNov3.JH576208 1671505 76 + 4416731 TAGAGAATTCCCTTACAGTCGGAATTACCCTGGGAAATCTCTTTAATCACCCATAAAGTGAATGCATAGTTATATT i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 87592 323 + 287728 I e mm10.chr12 89989573 257 - 120129022 I e saiBol1.JH378218 1207034 288 - 7082604 I e cebCap1.NW_016107827v1 1295193 309 + 1864846 I e otoGar3.GL873658 925052 360 + 5252280 I e calJac3.chr14 1357895 288 - 108792865 I e colAng1.NW_012118821v1 1349192 1083 - 13651311 M e chlSab2.chr14 1440705 311 - 107702431 I e panPan2.chr2A 1329908 292 + 114371477 I a score=55569.000000 s hg38.chr2_KI270774v1_alt 92255 16 + 223625 CATGAGA------GGAGCTTCG s panTro5.chr2A 1370159 16 + 111504155 CATGAGA------GGAGCCTCG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1330200 16 + 114371477 catgaga------ggagcctca i panPan2.chr2A I 292 C 0 s gorGor5.CYUI01015607v1 1355735 16 + 1464242 CATGAGA------GGAGCCTCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1080778 16 + 81552678 CACGAGA------GGAGCCTCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1411385 16 + 108979918 CACGAGA------GGAGCCGCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1383797 16 - 111193037 CACGAGA------GGAGCCTCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1412238 16 + 3644372 CATGAGA------GGAGCCTCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1366094 16 - 10304083 CATGAGA------GGAGCCTCA i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 919632 16 - 2200435 CATGACA------TGAGCCGCA i manLeu1.NW_012103754v1 C 0 C 0 s dasNov3.JH576208 1671581 22 + 4416731 TATGAgccactttggagattaa i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 87592 323 + 287728 I e mm10.chr12 89989573 257 - 120129022 I e saiBol1.JH378218 1207034 288 - 7082604 I e cebCap1.NW_016107827v1 1295193 309 + 1864846 I e otoGar3.GL873658 925052 360 + 5252280 I e calJac3.chr14 1357895 288 - 108792865 I e colAng1.NW_012118821v1 1349192 1083 - 13651311 M e chlSab2.chr14 1440705 311 - 107702431 I a score=18117.000000 s hg38.chr2_KI270774v1_alt 92271 4 + 223625 CACA s panTro5.chr2A 1370175 4 + 111504155 CACG i panTro5.chr2A C 0 I 1796 s panPan2.chr2A 1330216 4 + 114371477 catg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1355751 4 + 1464242 CGCG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1080794 4 + 81552678 CGCG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1411401 4 + 108979918 CACG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1383813 4 - 111193037 CACG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1412254 4 + 3644372 CACG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1366110 4 - 10304083 CACG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1441016 4 - 107702431 CACG i chlSab2.chr14 I 311 C 0 s manLeu1.NW_012103754v1 919648 4 - 2200435 CACG i manLeu1.NW_012103754v1 C 0 C 0 s dasNov3.JH576208 1671603 4 + 4416731 cata i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 87592 323 + 287728 I e mm10.chr12 89989573 257 - 120129022 I e saiBol1.JH378218 1207034 288 - 7082604 I e cebCap1.NW_016107827v1 1295193 309 + 1864846 I e otoGar3.GL873658 925052 360 + 5252280 I e calJac3.chr14 1357895 288 - 108792865 I e colAng1.NW_012118821v1 1349192 1083 - 13651311 M a score=128642.000000 s hg38.chr2_KI270774v1_alt 92275 23 + 223625 GGGACAGACTGCGGTCCCCAGAG s panTro5.chr2A 1371975 23 + 111504155 GGGACAGACTGCGGTCCCCAGAG i panTro5.chr2A I 1796 C 0 s panPan2.chr2A 1330220 23 + 114371477 gggacagactgCGGTCCCCAGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1355755 23 + 1464242 GGGACAGACTGCGGTCCCCAGAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1080798 23 + 81552678 GGGACAGACTGCCGTCCCCAGAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1411405 23 + 108979918 GGGACAGACTGAGGTCCCCGGAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1383817 23 - 111193037 GGGACAGACTGAGGTCCCCGGAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1412258 23 + 3644372 GGGACAGACTGCCGTCCCCGGAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1366114 23 - 10304083 GGGACAGACTGCCGTCCCCAGAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1441020 23 - 107702431 GGGATAGACTGCCGTCCCCAGAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 919652 23 - 2200435 GGGACAGACTGCCGTCCCCAGAG i manLeu1.NW_012103754v1 C 0 C 0 s cebCap1.NW_016107827v1 1295502 23 + 1864846 GGGACAGACTGCGGTCCCCAGAG i cebCap1.NW_016107827v1 I 309 I 35 s dasNov3.JH576208 1671607 23 + 4416731 tggtctctcggtaggctcaacag i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 87592 323 + 287728 I e mm10.chr12 89989573 257 - 120129022 I e saiBol1.JH378218 1207034 288 - 7082604 I e otoGar3.GL873658 925052 360 + 5252280 I e calJac3.chr14 1357895 288 - 108792865 I e colAng1.NW_012118821v1 1349192 1083 - 13651311 M a score=90229.000000 s hg38.chr2_KI270774v1_alt 92298 28 + 223625 --------------TCCATGAG-AGGA----------GCCTCACAT-------------------------------------------GGGGACA s panTro5.chr2A 1371998 29 + 111504155 --------------TCCATGAGGAGGA----------GCCTCGCAC-------------------------------------------GAGGACA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1330243 28 + 114371477 --------------TCCATGAG-AGGA----------GCCTCACGC-------------------------------------------GGGGACA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1355778 28 + 1464242 --------------TCCATGAG-AGGA----------GCCTCACGC-------------------------------------------GGGGACA i gorGor5.CYUI01015607v1 C 0 I 299 s nomLeu3.chr19 1080821 28 + 81552678 --------------TCCACGAG-AGGA----------GCCTCATGC-------------------------------------------GGGGACA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1411428 28 + 108979918 --------------CCCACGAG-ATGA----------GCCGCACAC-------------------------------------------GGGGACA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1383840 28 - 111193037 --------------CCCACGAG-AGGA----------GCCTCACAC-------------------------------------------GGGGACA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1412281 28 + 3644372 --------------CCCATGAG-AGGA----------ACCGCACAC-------------------------------------------GGGGACA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1366137 28 - 10304083 --------------CCCATGAG-AGGA----------GCCTCACAC-------------------------------------------AGGGACA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1441043 38 - 107702431 --------------CCCATGAG-AGGAGCCTCACACGGCCTCACAC-------------------------------------------GGGGATC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 919675 28 - 2200435 --------------CCCACGAG-AGGA----------GCCTCACAC-------------------------------------------GGGGACA i manLeu1.NW_012103754v1 C 0 C 0 s dasNov3.JH576208 1671630 85 + 4416731 tctgttttcctggcagcgttag-aaca----------gattggcattgctttaaattgggcaccggatgaagttgtcggcttgtattcaggggcca i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 87592 323 + 287728 I e mm10.chr12 89989573 257 - 120129022 I e saiBol1.JH378218 1207034 288 - 7082604 I e cebCap1.NW_016107827v1 1295525 35 + 1864846 I e otoGar3.GL873658 925052 360 + 5252280 I e calJac3.chr14 1357895 288 - 108792865 I e colAng1.NW_012118821v1 1349192 1083 - 13651311 M a score=72969.000000 s hg38.chr2_KI270774v1_alt 92326 21 + 223625 GACTGC----------CGTCCCCAGAG---------TCCA------------------------ s panTro5.chr2A 1372027 20 + 111504155 GACTGA----------GGTCCC-AGAG---------TCCA------------------------ i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1330271 21 + 114371477 GACTGC----------GGTCCCCAGAG---------TCCA------------------------ i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1356105 21 + 1464242 GACTGC----------GGTCCCCAGAG---------TCCA------------------------ i gorGor5.CYUI01015607v1 I 299 C 0 s nomLeu3.chr19 1080849 21 + 81552678 GACTGC----------CGTCCCCAGAG---------TCCA------------------------ i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1411456 21 + 108979918 GACTGC----------CGTCCCCGGAG---------CCCA------------------------ i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1383868 21 - 111193037 GACTGC----------CGTCCCCGGAG---------CCCA------------------------ i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1412309 21 + 3644372 GACTGC----------CGTCCCCAGAG---------CCCA------------------------ i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1366165 21 - 10304083 GACTGC----------CGTCCCCGGAG---------CCCA------------------------ i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1441081 21 - 107702431 GACTGC----------CATCCCCAGAG---------CCCG------------------------ i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 919703 21 - 2200435 GACTGC----------CGTCCCCGGAG---------CCCA------------------------ i manLeu1.NW_012103754v1 C 0 C 0 s dasNov3.JH576208 1671715 64 + 4416731 cactgtatgaaagttatgtatccggagatgctagactccactaaatgataaagcaagatgctca i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 87592 323 + 287728 I e mm10.chr12 89989573 257 - 120129022 I e saiBol1.JH378218 1207034 288 - 7082604 I e cebCap1.NW_016107827v1 1295525 35 + 1864846 I e otoGar3.GL873658 925052 360 + 5252280 I e calJac3.chr14 1357895 288 - 108792865 I e colAng1.NW_012118821v1 1349192 1083 - 13651311 M a score=127559.000000 s hg38.chr2_KI270774v1_alt 92347 23 + 223625 T-GAGAGGAGCCTCG-CACGGGGAC s panTro5.chr2A 1372047 23 + 111504155 TAGAGAGGAGCCTCG-CACGGGGA- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1330292 23 + 114371477 T-GAGAGGAGCCTCG-CACGGGGAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1356126 23 + 1464242 T-GAGAGGAGCCTCG-CACGGGGAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1080870 23 + 81552678 C-GAGAGGAGCCTCA-CGCGGGGAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1411477 23 + 108979918 T-GAGAGGAACCGCA-CACGGGGAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1383889 23 - 111193037 T-GAGAGGAACCGCA-CACGGGGAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1412330 23 + 3644372 T-GAGAGGAGCCTCA-CACGGGGAC i macNem1.NW_012011978v1 C 0 I 46 s cerAty1.NW_012000820v1 1366186 23 - 10304083 T-GAGATGAGCCGCA-CACGGGGAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1441102 23 - 107702431 T-GAGAGGAGCCTCA-CACGGGGAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 919724 23 - 2200435 T-GAGAGGAACCGCA-CACGGGGAC i manLeu1.NW_012103754v1 C 0 I 46 s calJac3.chr14 1358183 24 - 108792865 T-GACAGGAGCCTTGCCAAGGGGAC i calJac3.chr14 I 288 C 0 s saiBol1.JH378218 1207322 24 - 7082604 T-GACAGGAGCCTCGCCAAGGGGAC i saiBol1.JH378218 I 288 C 0 s dasNov3.JH576208 1671779 23 + 4416731 c-aataggagacttg-catgaaaac i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 87592 323 + 287728 I e mm10.chr12 89989573 257 - 120129022 I e cebCap1.NW_016107827v1 1295525 35 + 1864846 I e otoGar3.GL873658 925052 360 + 5252280 I e colAng1.NW_012118821v1 1349192 1083 - 13651311 M a score=-11718.000000 s hg38.chr2_KI270774v1_alt 92370 2 + 223625 -GT s panTro5.chr2A 1372070 2 + 111504155 -GT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1330315 2 + 114371477 -GT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1356149 2 + 1464242 -GT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1080893 1 + 81552678 -A- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1411500 1 + 108979918 -A- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1383912 1 - 111193037 -A- i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1366209 1 - 10304083 -A- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1441125 1 - 107702431 -A- i chlSab2.chr14 C 0 C 0 s calJac3.chr14 1358207 1 - 108792865 -A- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1207346 1 - 7082604 -A- i saiBol1.JH378218 C 0 C 0 s dasNov3.JH576208 1671802 2 + 4416731 tg- i dasNov3.JH576208 C 0 I 5 e aotNan1.NW_018513311v1 87592 323 + 287728 I e mm10.chr12 89989573 257 - 120129022 I e cebCap1.NW_016107827v1 1295525 35 + 1864846 I e otoGar3.GL873658 925052 360 + 5252280 I e colAng1.NW_012118821v1 1349192 1083 - 13651311 M e manLeu1.NW_012103754v1 919747 46 - 2200435 I e macNem1.NW_012011978v1 1412353 46 + 3644372 I a score=230873.000000 s hg38.chr2_KI270774v1_alt 92372 34 + 223625 GA-CTGC---TGT--CCCCAGATTCCAGA-CTCCTACCTCC s panTro5.chr2A 1372072 39 + 111504155 GAGCTGCCTGTGC--CGCCAGACTCCAGATCTCCTACCTCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1330317 34 + 114371477 GA-CTGC---TGT--CCCCAGACTCCAGA-CTCCTACCTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1356151 34 + 1464242 GA-CTGC---TGT--CCCCAGATTCCAGA-CTCCTACCTCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1080894 34 + 81552678 GA-CTGC---CGT--CCCCAGAGTTTAGA-CTCCTACCTCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1411501 34 + 108979918 GA-CTGC---CGT--CCCCAGAGTCCACA-CTCATACCTCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1383913 34 - 111193037 GA-CTGC---CGT--CCCCAGAGTCCACA-CTCATACCTCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1412399 34 + 3644372 GA-CTGC---CGT--CCCCAGAGTCCACA-CTCATACCTCC i macNem1.NW_012011978v1 I 46 C 0 s cerAty1.NW_012000820v1 1366210 34 - 10304083 GA-CTGC---CGT--CCCCAGAGTCCACA-CTCATACCTCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1441126 34 - 107702431 GA-CTGC---AGT--CCCCAGAGTCCATA-CTCATACCTCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 919793 34 - 2200435 GA-CTGC---CGT--CCCCAGAGTCCACA-CTCATACCTCC i manLeu1.NW_012103754v1 I 46 C 0 s colAng1.NW_012118821v1 1350301 34 - 13651311 GA-CTGC---TGT--CCCCAGAGTCCACA-CTCCTACCTCC i colAng1.NW_012118821v1 M 1083 C 0 s calJac3.chr14 1358208 33 - 108792865 CA-CTGC---AGT--CCCCAGAACCCAGG-CTCCCA-CTTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1207347 33 - 7082604 GA-CTGT---GGT--CCCCAGAGCCCAGG-CTCCCA-CTTC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 87915 33 + 287728 GA-CTGC---GGT--CCCCAGAGCCCAGG-CTCCCA-CTTC i aotNan1.NW_018513311v1 I 323 C 0 s dasNov3.JH576208 1671809 36 + 4416731 ga-ctgg---ggtaaccacggattctgtt-ctcccatttca i dasNov3.JH576208 I 5 C 0 e mm10.chr12 89989573 257 - 120129022 I e cebCap1.NW_016107827v1 1295525 35 + 1864846 I e otoGar3.GL873658 925052 360 + 5252280 I a score=123718.000000 s hg38.chr2_KI270774v1_alt 92406 19 + 223625 TACTCAGA-AAAACTGGAGC s panTro5.chr2A 1372111 18 + 111504155 TACTCAGA-AAAAACG-AGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1330351 19 + 114371477 TACTCAGA-AAAACTGGAGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1356185 19 + 1464242 TACTCAGA-AAAACTGGAGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1080928 19 + 81552678 TACTCATA-AAAACTGGAGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1411535 19 + 108979918 TACTTGGA-AATACTGGAGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1383947 19 - 111193037 TACTTGGA-AATACTGGAGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1412433 19 + 3644372 TACTTGGA-AATACTGGAGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1366244 19 - 10304083 TACTTGGA-AACACTGGAGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1441160 19 - 107702431 TACTTGGA-AACACTGCAGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 919827 19 - 2200435 TACTTGGA-AACACTGGAGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1350335 19 - 13651311 TACTCGGA-AACACTGGAGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1358241 19 - 108792865 TACTCAGA-AACAGCGGGGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1207380 19 - 7082604 CACTCAGA-AACAGCAGGGA i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 87948 19 + 287728 TACTCAGA-AACAGTGGGGA i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 89989830 20 - 120129022 TGCTCACATTACATCTGGAC i mm10.chr12 I 257 C 0 s dasNov3.JH576208 1671845 19 + 4416731 cactcaGA-AACATCTCAAC i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1295525 35 + 1864846 I e otoGar3.GL873658 925052 360 + 5252280 I a score=81990.000000 s hg38.chr2_KI270774v1_alt 92425 9 + 223625 CATT-AAAAT s panTro5.chr2A 1372129 10 + 111504155 CATTTGAAAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1330370 9 + 114371477 CATT-GAAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1356204 9 + 1464242 CATT-AAAAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1080947 9 + 81552678 CATT-AAAAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1411554 9 + 108979918 CATT-AAAAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1383966 9 - 111193037 CATT-AAAAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1412452 9 + 3644372 CATT-AAAAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1366263 9 - 10304083 CATT-AAAAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1441179 9 - 107702431 CATT-AAAAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 919846 9 - 2200435 CATT-AAAAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1350354 9 - 13651311 CCTT-AAAAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1358260 9 - 108792865 CATT-AAAAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1207399 8 - 7082604 CATT--AAAT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1295560 9 + 1864846 CATT-AAAAT i cebCap1.NW_016107827v1 I 35 C 0 s aotNan1.NW_018513311v1 87967 9 + 287728 CGTT-AAAAT i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 89989850 9 - 120129022 TATA-GAAAC i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1671864 9 + 4416731 TAAT-GATAT i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 925052 360 + 5252280 I a score=1437305.000000 s hg38.chr2_KI270774v1_alt 92434 146 + 223625 ---GGTTACTGCTGAAT-GT--GGAGCTTTTTGTGG-T--GTGAGAGAGCCCCATGTTTATTTCCTG-AATTTCAATTAACAAAAACCCTCC---TGTA----TTTGTCTTTAGTTTTATCTGACTCATATAAACTGGGAAATT--------ACCTA--CC----------TGAGTTTGAACA s panTro5.chr2A 1372139 150 + 111504155 ---GGTTACTGCTGACTCGTTGGAAGCTTTTCGGGG-TATGTGAGAGAGCCC-ACCGTTATTTCTTGGAATTTCAAT-AACAAAAACCCTCC---TGTA----TTTGTCTTTAGTTTTATCTGACTCATATAAACTGGGAAATT--------ACCTC--AC----------TGAGTTTGAACA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1330379 146 + 114371477 ---GGTTACTGCTGACT-GT--GGAGCTTTTCGGGG-T--GTGAGAGAGCCCCATGTTTATTTCTTG-AATTTCAATTAACAAAAACCCTCC---TGTA----TTTGTCTTTAGTTTTATCTGACTCCTATAAACTGGGAAATT--------ACCTA--CC----------TGAGTTTGAACA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1356213 146 + 1464242 ---TGTTACTGCTGACT-GT--GGAGCTTTTTGGGG-T--GTGAGAGAGCCCCATGTTTATTTCTTG-AATTTCAGTTAACAAAAACCCTCC---TATA----TTTGTCTTTAGTTTTATCTGACTCATGTAAACTGGGAAATT--------ACCTA--CC----------TGAGTTTGAACA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1080956 144 + 81552678 -----TTACTGCTAACT-GT--GGAGCTTTTCGGGG-T--GTGAGAGAGCCCCATGTTTATTTCTTG-AATTTCAATTAACGAAAACCCTCC---TATA----TTTGTCTTTGGTTTTATCTGACTCATATAAACTGGCAAATT--------ACCTA--CC----------TGAGTTTGAACA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1411563 146 + 108979918 ---GGTTACTGCTAACT-GG--GGAGATTTTCGGGG-T--GTGAGAGAGCCCCATGATTATTTCTTG-AATTTCAATTAATGAAAACCCCCC---TATA----TTTGTCTTTGATTTTACCTGACTCATATAAACTGGCAAATT--------ACCTA--CC----------TGAGTTTGAACA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1383975 146 - 111193037 ---GGTTACTGCTAACT-GG--GGAGATTTTCGGGG-T--GTGAGAGAGCCCCATGATTATTTCTTG-AATTTCAATTAATGAAAACCCCCC---TATA----TTTGTCTTTGATTTTACCTGACTCATATAAACTGGCAAATT--------ACCTA--CC----------TGAGTTTGAACA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1412461 146 + 3644372 ---GGTTACTGCTAACT-GG--GGAGATTTTCGGGG-T--GTGAGAGAGCCCCATGATTATTTCTTG-AATTTCAATTAATGAAAACCCCCC---TATA----TTTGTCTTTGATTTTACCTGACTCATATAAACTGGCAAATT--------ACCTA--CC----------TGAGTTTGAACA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1366272 146 - 10304083 ---GGTTACTGCTAACT-GG--GGAGATTTTTGGGG-T--GTGAGAGAGCCCCATGATTATTTCTTG-AATTTCAATTAATGAAAACCCCCC---TACA----TTTGTCTTTGATTTTACCTGACTCATATAAACTGGCAAATT--------ACCTA--CC----------TGAGTTTGAACA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1441188 146 - 107702431 ---GGTTACTGCTAACT-GG--GGAGATTTTCGGGG-T--GTGAGACAGCCCCATGATTATTTCTTG-AATTTCAATTAATGAAAACCCCCC---TATA----TTTGTCTTTGATTTTACCTGACTCATATAAACTGGCAAATT--------ACCTA--CC----------TGAGTTTGAACA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 919855 146 - 2200435 ---GGTTACTGCTAACT-GG--GGAGATTTTCGGGG-T--GTGAGAGAGCCCCATGATTATTTCTTG-AATTTCAATTAATGAAAACCCCCC---TATA----TTTGTCTTTGATTTTACCTGACTCATATAAACTGGCAAATT--------ACCTA--CC----------TGAGTTTGAACA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1350363 145 - 13651311 ---GGTTACTGCTAACT-GG--GGAGATTTTCGGGG-T--GTGAGAGAGCCCCATGATTATTTCTTG-AATTTCAATTAATGAAAA-CCCCC---TATA----TTTGTCTTTGGTTTTATCTGACTCATATAAACTGGCAAATT--------ACCTA--CC----------TGAGTTTGAACA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1358269 145 - 108792865 ---GGTTACTGCTATCT-GG--GGAG-TTATCAGGG-T--ATGAGAGAGATCCATGTTTATTTCTTA-AATTTCAGTTCACGAAATGCCTCC---TACA----TTTGTCTTTGGTTTTATCTGACTTGTATAAACTGGCAAATA--------ACTTA--CT----------TGAGTTTGAACA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1207407 146 - 7082604 ---GGTTGCTGCTATCT-GG--GGAGTTTATCGGGG-T--GTGAGAGAGATCCATGCTTATTTCTTA-AATTTCAATTCATGAAATGCCTCC---CATG----TTTGTCTTTGGTTTTATCCGACTTGTATAAACTGGCAAATA--------ATCTA--CC----------TGAGTTTGAACA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1295569 146 + 1864846 ---GGTTAGTGCTATCT-GG--GGAGTTTATTGGGG-T--GTGAGAGAGATCCATCCTTATTTCTTA-AATTTCAATTCACGACATGCCTCC---TATA----TTTGTCTTTGGTTTTATCTGACTTGTATAAACTGGCAAATA--------ACCTA--AC----------TGAGTTTGAACA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 87976 140 + 287728 ---GGTTACTGCTATCT-GG--GGAGTTTATCGGGG-T--GTGAGAGAGATCCATGTTTATTTCTTA-AATTTCAATTCACGAAATGCCTCC---TATA----------CTTGGTTTTATCTGACTTGTATAAACTGGCAAATA--------ACCTA--CC----------TGAGTTTGAACA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 925412 139 + 5252280 ---GGTCCCTGCT-TCT-AG--GGCATTTCCCGGGG----ACAGGGGAGCACTG-GCCTGGTTACTG-ACTTCCTATCAACTGGAAGTTTCC---AGC--------GTATCTGGTCTTCTCCAACTCATGTAAATTGGCAAATT--------ACCTT--CT----------TGGGTTTGAACA i otoGar3.GL873658 I 360 I 3840 s mm10.chr12 89989859 159 - 120129022 ---TGTCATCACTAGAA-GT--GGTGGTTTTAAAGTCT--GTGGGAGAACCAC-TGTCTATTTATCT-CATTTCTGTCAACTTGTGTCTCTTCTGTACA----TGTGTCTTTGGTTTATTCTGACTTAGGTAAATTGGCAAATTGTACGCTGACCTAGGTT----------TAAGTTTGAACA i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1671873 160 + 4416731 TGCTGTTTCTGCCGAGT-A---AGAATTTTACAGAG-T--GTGGGAAAGCACCATGCTTTTTTATTG-AATTTATATTAGCTAAAAGCATTA---TATATACATATATATCTGCTTTTGTCTGG--TATATAAATTGGCAAATT--------ACTTA--ACTTACTGAGATTGAATTTTAACA i dasNov3.JH576208 C 0 C 0 a score=2235165.000000 s hg38.chr2_KI270774v1_alt 92580 266 + 223625 AAGCTGAATA--ATTTTTCAAA-T-TTTACAGGG--GAATTTAATTAAGTTTGAATGACAGC-AT------TTTATTTTC------CAGA------------tttgttttaaaatgaatt-gagctg--taataag-agttggaagataacacaga--g-ctccca-aacct-ccttcaccc----acctgctcagtgttaactctatgc-acggccacagcacagcaaccaggaccagggagtggacgtggatccaatgctggtgattacatctca-gagct----caccc-tggtatccccagcttttccatctg s panTro5.chr2A 1372289 271 + 111504155 AAGCTGAATATCATTTTTCAAAGT-TTTACAGGGCAGAATTTAATTAAG-TTGAATGACAGCAAT------TTTATTTTT------CAAA-------------TTGTTTTAAATGAGATT-GAGCTGCCTAATAAGAAGTTGGAAGATAACACAGA--GCCTCTTG-AACCTGCCTTCACCC----ACCTGCTCAGTGTTAACTCTGTGCAACGGC--CAGCAC-GCAACCA-GACCATGGCGTGGA-GTCGATCCAATGCCTGCCATTACATCTCACGAGCT----CACCC-CCGTAT-CCCAACTTTTCCATCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1330525 266 + 114371477 GAGCTGAATA--ATTTTTCAAA-T-TTTACAGGG--GAATTTAATTAAGTTTGAATGACAGC-AT------TTTATTTTC------AAAA------------tttgttttaaaatgaatt-gagctg--taataag-agttggaagataacacaga--g-ctcttg-aacct-ccttcaccc----acctgctcagtgttaactctgtgc-acggccacagcacagcaaccaggaccagggcgtggacgtggatccaatgctgctgattacatctca-gagct----caccc-ccgtatccccaacttttccatctg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1356359 266 + 1464242 AAGCTGAATA--ATTTTTCAAA-T-TTTACAGGC--GAATTTAATTAAGTTAAAATGACAGC-AT------TTTATTTTC------AAAA------------tttgttttaaaatgaatt-gagctg--taataag-agttggaagataacacaga--g-ctccag-aacct-ccttcaccc----acctgctcagtgttaactctatgc-acggccacagcacagcaaccaggaccagggcgtggacgcggatccaacgctgctgattacatctca-gagct----caccc-cggtatccccagcttttccatctg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1081100 266 + 81552678 AAGCTGAATA--ATTTTTCAAA-T-TTTACAGGG--GAATTTACTTAAGTTTGAATGACAGC-AT------TTTATTTTC------AAAA------------tttgttttaaaataaatt-gagctg--taataag-agttggaagacaacacaga--g-ctgccg-aacct-ccctcaccc----acctgctcagtgttaactctgtgc-acggccaccgcacagcaaccagaaccagggcgtggacgcggatccagtgctgctgactgcatctca-gagct----caccc-cggtatccccagcttttccatctg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1411709 266 + 108979918 AAGCTGAATA--ATTCTTCAAA-T-TTTACAGGG--AAATTTAATTAAGTT----TGACAGC-AT------TTTAttttt------aaaattt--------atttgttttaaaatgaatt-gagctg--tagtaag-agttggaaggtaacacaga--g-ctccca-aacct-ccttcacct----acctgctcagtgttacctctgtgc-acggccacagcacagcaaccagaatcagggcgtggacgcagatccgatgctgctgactacatctca-gagct----cgctc-cggtatccccagcttttccatctg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1384121 266 - 111193037 AAGCTGAATA--ATTCTTCAAA-T-TTTACAGGG--AAATTTAATTAAGTT----TGACAGC-AT------TTTAttttt------aaaattt--------atttgttttaaaatgaatt-gagctg--tagtaag-agttggaaggtaacacaga--g-ctccca-aacct-ccttcacct----acctgctcagtgttacctctgtgc-acggccacagcacagcaaccagaatcagggcgtggacgcagatccgatgctgctgactacatctca-gagct----cgctc-cggtatccccagcttttccatctg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1412607 266 + 3644372 AAGCTGAATA--ATTCTTCAAA-T-TTTACAGGG--AAATTTAATTAAGTT----TGACAGC-AT------TCTAttttt------aaaattt--------atttgttttaaaatgaatt-gagctg--tagtaag-agttggaaggtaacacaga--g-ctccca-aacct-ccttcacct----acctgctcagtgttacctctgtgc-acggccacagcacagcaaccagaatcagggcgtggacgcagatccgatgctgctgactacatctca-gagct----cgctc-cggtatccccagcttttccatctg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1366418 266 - 10304083 AAGCTGAATA--ATTCTTCAAA-T-TTTACAGGG--AAATTTAATTAAGTT----TGACAGC-AT------TTTAttttt------aaaattt--------atttgttttaaaatgaatt-gagctg--tagtaag-agttggaaggtaacacaga--g-ctccca-aacct-ccttcacct----acctgctcagtgttacctctgtgc-acggccacagcacagcaaccagaatcagcgcgcggacgcagatccgatgctgctgactacatctca-gagct----cgctc-cggtatccccagcttttccatctg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1441334 263 - 107702431 AAGCTGAATA--ATTCTTCAAA-T-TTCACAGGG--AAATTTAATTAAGTT----TGACAGC-AT------TTTATTTTA------AAAATT----------TTTGTTTTAAAATTAATT-GAGCTG--TAGTAAG-AGTTGGAAGATAACACAGA--G-CT-CGA-AACCT-CCTTCACCT----ACCTGCTCAGTGTTACCTCTGTGC-ACGGCCACAGCACAGCAACCAGAATCAGCGCGTGGACGCAGATCCGATGCTGCTGACTACATCTCA-GAGCT----CACTC-CGGTATCCCCAGCTTTTCCATCTG i chlSab2.chr14 C 0 I 676 s manLeu1.NW_012103754v1 920001 266 - 2200435 AAGCTGAATA--ATTCTTCAAA-T-TTTACAGGG--AAATTTAATTAAGTT----TGACAGC-AT------TTTAttttt------aaaattt--------atttgttttaaaatgaatt-gagctg--tagtaag-agttggaaggtaacacaga--g-ctccca-aacct-ccttcacct----acctgctcagtgttacctctgtgc-acggccacagcacagcaaccagaatcagcgcgaggacgcagatccgatgctgctgacgacatctca-gagct----cgctc-cggtatccccagcttttccatctg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1350508 253 - 13651311 AAGCTGAATA--CTTCTTCAGA-T-TTTACAGGG--GAATTTAATTAAGTT----TGACAGC-AT------TTTAtttca------aaaattt--------gtttgttttaaaatgaatt-gagctg--tagtaag-agttggaagataacacaga--g-ctccca-aaact-ccttcaccc----acctgctcagtgtta--------------ccacagcacagcaaccagaatgagggcgtggacgcagatccgatgctgctgactacatctca-gagct----cactc-cggtatccccagcttttccgtctg i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1358414 274 - 108792865 AAGATGAATA--ATTCTTCAAC-T-TTTACAGGG--GAAT----TTAAGTTTGAATTACAGC-AT------TTTATTTTC------AAAACATTTCAAGTCAtttgttttaaaatgactt-gagctc--taataag-agctggaaggtaacacagg--g-ctccca-aacac-ccttcaccc----acgtggtcagtgttaagaccctgc-acggccacagcacggccaccagaaccaggacatggacgcagatccgaggctgctgactacgtgtca-gggct----catcc-cggtgtcgccagcttttccatctg i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1207553 270 - 7082604 AAGATGGATA--ATTCTTCAGA-T-TTTACAGGG--GAATTTAATTAAGTTTGAATTACAGC-AT------TTTATTTTC------AAAACGT--------Gtttgttttaaaatgactt-gagctc--taataag-agttggaaggtaacacagg--g-ctccca-aacac-ccttcaccc----acctggtcagcattaagaccctgc-acggccacagcacggcgaccagagccaggacgtggacgcaggtccaaggctgccgacaaggtctgg-gggct----catcc-cagtgtcgccggcttttccatctg i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1295715 270 + 1864846 AAGATGGATA--ATTCTTCAAA-T-TTTACAGGG--GAATTTAATTAAGTTTGAATTACAGC-GC------TTTATTTTC------AAAATGT--------Gtttgttttaaaatgactt-gagctc--taataag-agttggaaggtgacacagg--g-ctccca-aacac-ccttcaccc----acctggtcagtgtcaagaccctgc-acggccacagcatggcgaccagatccaagacgtggatgcaggtccgaggctgctgacaacatctca-gggct----catcc-cggtgtcgccagcttttccatctg i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 88116 274 + 287728 AAGATGGATA--ACTCTTCAAA-T-TTTACAGGG--GAATTTAATTAAGTTTGAATTACAGC-CT------TTTATTTTC------AAAATGT--------Gtttgttttaaaatgactt-gagctt--taataag-agttggaaggtaacacagg--g-ctcccg-aacac-ccttcacccacctacctggtcagtgttaataccctgc-acgaccacagcacggccaccagaacgaggacagggacgcggatctgaggctgctgacgacatctca-gggct----cattc-tggtgtcgccagcttttccatctg i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 89990018 244 - 120129022 AAACCAAATG--ATTCTTTGAA-T-TCTACCAGA--TAAGTTAATTAATTT----TAATGCA-ATAAATTATTCATTTTT------AAATCCT-------AGGAAACTTTAAGATGATTC---------TCAAATG-AGCTGGAAGAC----TGGA--G-TGACCATTACCA-CCTCCCCCA----ACAGGAACATTGTAACTACAGTAT----------GTTCTTTAACCAGGA-----------ATGAAACTCCAAAATCATCCTTCATA----A-AAGCTACCCTGTTC-TGGTTTTCCTAGTTCTCCAGTCTG i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1672033 259 + 4416731 AAACTGAATA--ATTCTTCAAA-TCTTTATAGAG--AAAGTTATTTATAGTTTAATTGGAGG-AT------TTTAGTTTCTTTTAGGAAATTC--------ttttattttaaaatgatttttcattt--ttgtaag-agttgaatgataatacagaacg-ttccca-tgtat-gtttcaccc----agattccc--------catcctgg-gtatccacaata--------agactcaagaaattaacagtgatatgctcctattaatta---atca---gtt----tattcttgatttcccccattttcccacaa- i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 925551 3840 + 5252280 I a score=994681.000000 s hg38.chr2_KI270774v1_alt 92846 160 + 223625 catcc-tttcctcttccag-gatccagtcctgg-cactgtgcagcccacggccgt-cgggggtcat-ca----ggtccct-g----agt---ctcctctcatc-----catgTTCATCTCTtaaaaaat-aaactta--caaatttaaaaatacaaaa----aacaG----------TGCGCGcacacacacacacaca--- s panTro5.chr2A 1372560 165 + 111504155 CATTC-CTTCCTGTTCCAG-GATCCAGTCCTGG-CACTGTGCAGCCTACGGCCGTGCGGGGGTCATGCA----GGTCCCT-GCAGTCGT---CTCCTCTCAT------CATGTTCATCTCTTAAAAAATGAAACTTA--CAAATTTAAATAAATACAA----AACAG----------TGCACACAC-CACACACAAACA--- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1330791 157 + 114371477 catcc-tttcctgttccag-gatccagtcctgg-cactgtgcagcctacggccgt-cgggggtcat-ca----ggtccct-g----agt---ctcctctcatc-----catgTTCATCTCTtaaaaaat-aaactta--caaatttaaaaatacaaaa----aacaG----------TGcacacacacacacacac------ i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1356625 152 + 1464242 catct-tttcctgttccag-gatccagtcctgg-CACTGTGCAGCCTACGGCCGT-CGGGGGTCAT-CA----GGTCCCT-G----AGT---CTCCTCTCATC-----CATGTTCATCTCTtaaaaaat-aaactta--caaatttaaaaatacaaaa----aacaG----------TGcacacacac-----cac------ i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1081366 137 + 81552678 cctca-tttcctgttccag-gatctggtcctgg-CACTGTGCAGCCTATGGCTGT-CGGGGGTCAT-CA----AGTCCCT-G----AGT---CTCCTCTCATC-----C---------------------AAACTTA--CAAATTTAAAAATACAAAA----AACAG----------cacacgcacacacacacac------ i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1411975 170 + 108979918 tgtcc-tttcccgttccag-catccagtcctgg-caccgtgcagcctacagccct-tgggggtcat-ca----ggcccct-g----agtctcctccTCTCATC-----CATGTTCATCTCTTAAAAAAT-AAACTTA--CAAATTTAAAAATGCAAAAAACGAACAG----cacacacacacacacacacacacac------ i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1384387 170 - 111193037 tgtcc-tttcccgttccag-catccagtcctgg-caccgtgcagcctacagccct-tgggggtcat-ca----ggcccct-g----agtctcctccTCTCATC-----CATGTTCATCTCTTAAAAAAT-AAACTTA--CAAATTTAAAAATGCAAAAAACGAACAG----cacacacacacacacacacacacac------ i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1412873 148 + 3644372 tgtcc-tttcccgttccag-catccagtcctgg-caccgtgcagcctacagccct-tgggggtcat-ca----ggcccct-g----agtctcctccTCTCATC-----CATGTTCATCTCTTAAAAAAT-AAACTTA--CAAATTTAAAAATGCAAAAAACGAACAG--------------------------cac------ i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1366684 145 - 10304083 tgtcc-tttcccgttccag-catccagtcctgg-caccgtgcagcctacggccct-tgggggtcat-ca----ggcccct-g----agtctcctccTCTCATC-----CATGTTCATCTCTTAAAAAAT-AAACTTA--CAAATTTAAAAATGCAAAAAACGAACAG----------------------------------- i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 920267 148 - 2200435 tgtcc-tttcccgttccag-catccagtcctgg-cactgtgcagcctacggccct-tgggggtcat-ca----ggcccct-g----agtctcctccTCTCATC-----CATGTTCATCTCTTAAAAAAT-AAACTTA--CAAATTTAAAAATGCGAAAAACGAACAG--------------------------CGC------ i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1350761 164 - 13651311 tgtcc-tttcctgttccag-catccagtcctga-caccgtgcaacctactgccct-tgggggtcat-ca----ggcccct-g----agtctcctccTCTCATC-----CATGTTCATCTCTTAAAAGAT-AAACTTA--CAAACTTAAAAATGCAAAAAACGAACAG----------TGCGCGCGCGCGcacacac------ i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1358688 144 - 108792865 tgtcc-tttcctgccccag-gacccagtcctgg-caccgtgtagcctgc-accct-cgggggtcat-ca----ggcccct-g----agtctcctcTTCCCATC-----CATGTTGTTCTCTTAAAAAAC-AAACTTA--TAAATTATAAAATACAAAAAACAAACAG----------------------------------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1207823 153 - 7082604 tgtcc-tttcctgctcccg-gatccagtcctgg-CACCGTGCAGCCTGT-GCCCT-CGGGGGTCAT-CA----GGCCCCT-G----AGTCGCCTCTTCCCATC-----CATGTTGTTCTCttaaaaaat-aaactta--taaatttaaaaataCAAAAAGCAAACAG--------------------cacgcacac------ i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1295985 173 + 1864846 tgtcc-tttcctgctccag-gacccagtcctgg-caccgtgcagcctgt-gccct-tgggggtcat-ca----ggcccct-g----agtctcctcTTCCCGTC-----CATGTTGTTCTCTTAAAAAAT-AAACTTA--TAAATTTAAAAATACAAAAAGCAAACAGCGTGTGCAcacacacgcacacacacacac------ i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 88390 139 + 287728 tgtcc-tttcctgctccag-gatccagtcccgg-caccgtg-----tgc-gccct-tgggggtcat-ca----ggcccct-g----agtctcctcttcccatc-----cgtgTTGTTCTCTTAAAAAAT-AAACTTA--TAAATTTAAAAATACAAAAAGTAAacag----------------------------------- i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 89990262 134 - 120129022 --TCT-GTTTTTTATCCAGAGATGCAATGCAGG-TACTATGT------------T-GTGGTGTTAG-CATCGCAGACCCT-T----AGTTTCCATGGCTTAAA-----GATATTTTTTCTT---AAAAT-AATCATAATCAAGTTTATGAATGAA-------Aacac-----------------------acacac------ i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1672292 149 + 4416731 tgtcctttttccattcccg-gatccaacataggatgccat----------gttcc-aagtagtcat-ga----agtccccag----agt---ctcttctaatcggtggcaTCCTTTTCTTTTCGAACTT-AAA------AGAATTTTTAAACG---------AACAA----------CATACATACACACACACAC---ACA i dasNov3.JH576208 C 0 I 387 e otoGar3.GL873658 925551 3840 + 5252280 I e chlSab2.chr14 1441597 676 - 107702431 I a score=615286.000000 s hg38.chr2_KI270774v1_alt 93006 76 + 223625 catgcacgtgcacat-acacacacaagccaggcaccaaaagac-aaacacctcatgatctccctcctatatggaatct s panTro5.chr2A 1372725 75 + 111504155 -ATTCAAGCGCACATAACACACacaagcgaggcac--aaagacaaaacacctcatgatctccctcctatatgcaatct i panTro5.chr2A C 0 I 20 s panPan2.chr2A 1330948 75 + 114371477 -atgcacgtgcacat-acacacacaagccaggcaccaaaagac-aaacacctcatgatctccctcctatatggaatct i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1356777 75 + 1464242 -atgcacgcgcacat-acacacacaagccaggcaccaaaagac-aaacacctcatgatctccctcctatatggaatct i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1081503 73 + 81552678 -a--cacacacacac-acacacacaagccaggcaccaaaagac-aaacacctcatgatctccgtcctatatggaatct i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1412145 75 + 108979918 -acacacacacacac-acacacacacgccaagcaccaaaagac-aaacacctcatgatctccctcctatatggaatct i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1384557 75 - 111193037 -acacacacacacac-acacacacacgccaagcaccaaaagac-aaacacctcatgatctccctcctatatggaatct i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1413021 75 + 3644372 -acacacacacacac-acacacacacgccaagcaccaaaagac-aaacacctcatgatctccctcctatatggaatct i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1366829 74 - 10304083 --CGCGcacacacac-acacacacacgccaagcaccaaaagac-aaacacctcatgatctccctcctatatggaatct i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 920415 75 - 2200435 -GCGcacacacacac-acacacacacgccaagcaccaaaagac-aaacacctcatgatctccctcctatatggaatct i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1350925 75 - 13651311 -acacacacacacac-acacacacaTgccaggcaccaaaagac-aaatatctcatgatctccctcctatatggaatct i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1358832 70 - 108792865 ------TACACACAC-ACACAAACGCAccaggcaccgaaagat-aaacacttcatgatctccctcctatatggaattt i calJac3.chr14 C 0 I 1 s saiBol1.JH378218 1207976 75 - 7082604 -acacacacacacac-acacacacgcaccaggcaccaaaagac-aaacacttcatgatctccctcctatatggaattt i saiBol1.JH378218 C 0 I 1 s cebCap1.NW_016107827v1 1296158 75 + 1864846 -acgcacgcacgcac-acacgcacgcaccaggcaccaaaagat-aaacacttcatgatctcctttctatatggaattt i cebCap1.NW_016107827v1 C 0 I 1 s aotNan1.NW_018513311v1 88529 70 + 287728 ------cacacacac-acatacacacaccaggcaccaaaatat-aaacacttcatgatctccctcctgtatggaattt i aotNan1.NW_018513311v1 C 0 I 1 s mm10.chr12 89990396 73 - 120129022 -acacacacacacac-acacacacG-gccaggcat-gggagtc-aaatacttcaccatctttattgtatgtagaacct i mm10.chr12 C 0 C 0 e otoGar3.GL873658 925551 3840 + 5252280 I e dasNov3.JH576208 1672441 387 + 4416731 I e chlSab2.chr14 1441597 676 - 107702431 I a score=105363.000000 s hg38.chr2_KI270774v1_alt 93082 16 + 223625 aaaagtgtcgagctca s panPan2.chr2A 1331023 16 + 114371477 aaaaaagtcaaactca i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1356852 15 + 1464242 -aaaaagtcgagctca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1081576 16 + 81552678 aaaaaagtcgaactcg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1412220 16 + 108979918 aaaaaagtcgaactcg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1384632 16 - 111193037 aaaaaagtcgaactcg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1413096 16 + 3644372 aaaaaagtcgaactcg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1366903 16 - 10304083 aaaaaagtcgaactcg i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 920490 16 - 2200435 aaaaaagtcgaactcg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1351000 16 - 13651311 aaaaaagttgaactct i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1358903 16 - 108792865 taaaatgttgaactca i calJac3.chr14 I 1 C 0 s saiBol1.JH378218 1208052 16 - 7082604 aaaaacgtcgaactca i saiBol1.JH378218 I 1 C 0 s cebCap1.NW_016107827v1 1296234 16 + 1864846 aaaaatgttgaactca i cebCap1.NW_016107827v1 I 1 C 0 s aotNan1.NW_018513311v1 88600 16 + 287728 taaaatgttgaactca i aotNan1.NW_018513311v1 I 1 C 0 s mm10.chr12 89990469 16 - 120129022 aaaaatgacaatatta i mm10.chr12 C 0 C 0 e otoGar3.GL873658 925551 3840 + 5252280 I e dasNov3.JH576208 1672441 387 + 4416731 I e chlSab2.chr14 1441597 676 - 107702431 I e panTro5.chr2A 1372800 20 + 111504155 I a score=134944.000000 s hg38.chr2_KI270774v1_alt 93098 17 + 223625 tggaa--gcagagagtgga s panTro5.chr2A 1372820 18 + 111504155 tggaaagacagagagt-ga i panTro5.chr2A I 20 C 0 s panPan2.chr2A 1331039 17 + 114371477 tggaa--gcagagagtgga i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1356867 17 + 1464242 tggaa--gcagagagtgga i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1081592 17 + 81552678 tggaa--gcagagagtgga i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1412236 17 + 108979918 tggaa--gcagagagtggc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1384648 17 - 111193037 tggaa--gcagagagtggc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1413112 17 + 3644372 tggaa--gcagagagtggc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1366919 17 - 10304083 tggaa--gcagagagtggc i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 920506 17 - 2200435 tggaa--gcagagagtggc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1351016 15 - 13651311 tggaa--gc--agagtggc i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1358919 17 - 108792865 tggaa--acagagagtgga i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1208068 17 - 7082604 tggaa--acagagagtgga i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1296250 17 + 1864846 tggaa--acagagagtgga i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 88616 17 + 287728 tggaa--acagagagtgca i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 89990485 17 - 120129022 tggag--gtgaggaataga i mm10.chr12 C 0 I 5685 e otoGar3.GL873658 925551 3840 + 5252280 I e dasNov3.JH576208 1672441 387 + 4416731 I e chlSab2.chr14 1441597 676 - 107702431 I a score=59941.000000 s hg38.chr2_KI270774v1_alt 93115 7 + 223625 tg-gtgga s panTro5.chr2A 1372838 8 + 111504155 tgcgtgga i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1331056 7 + 114371477 tg-gtgga i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1356884 7 + 1464242 tg-gtgga i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1081609 7 + 81552678 tg-gtgga i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1412253 7 + 108979918 tg-gtgga i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1384665 7 - 111193037 tg-gtgga i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1413129 7 + 3644372 tg-gtgga i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1366936 7 - 10304083 tg-gtgga i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 920523 7 - 2200435 tg-gtgga i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1351031 7 - 13651311 cg-gtgga i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1358936 7 - 108792865 tg-gtgga i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1208085 7 - 7082604 tg-ttggA i saiBol1.JH378218 C 0 I 515 s cebCap1.NW_016107827v1 1296267 7 + 1864846 tg-gtgga i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 88633 7 + 287728 tg-gtgga i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89990502 5685 - 120129022 I e otoGar3.GL873658 925551 3840 + 5252280 I e dasNov3.JH576208 1672441 387 + 4416731 I e chlSab2.chr14 1441597 676 - 107702431 I a score=71387.000000 s hg38.chr2_KI270774v1_alt 93122 13 + 223625 cacc-tagggttac s panTro5.chr2A 1372846 14 + 111504155 caccttagggttat i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1331063 13 + 114371477 cacc-tagggttat i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1356891 13 + 1464242 cacc-tagggttac i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1081616 13 + 81552678 cacc-tagggttac i nomLeu3.chr19 C 0 I 15 s rheMac8.chr13 1412260 13 + 108979918 cacc-tagggttag i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1384672 13 - 111193037 cacc-tagggttag i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1413136 13 + 3644372 cacc-tagggttag i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1366943 13 - 10304083 cacc-tagggttag i cerAty1.NW_012000820v1 C 0 I 151 s manLeu1.NW_012103754v1 920530 13 - 2200435 cacc-tagggttag i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1351038 13 - 13651311 cacc-tagggttag i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1358943 12 - 108792865 cacc-tagggtag- i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1296274 12 + 1864846 cacc-tagggtgg- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 88640 12 + 287728 cacc-tagggtag- i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89990502 5685 - 120129022 I e saiBol1.JH378218 1208092 515 - 7082604 I e otoGar3.GL873658 925551 3840 + 5252280 I e dasNov3.JH576208 1672441 387 + 4416731 I e chlSab2.chr14 1441597 676 - 107702431 I a score=90852.000000 s hg38.chr2_KI270774v1_alt 93135 19 + 223625 g----------------gggcaggtgcggtggggg-------------------------------------- s panTro5.chr2A 1372860 18 + 111504155 -----------------gggcaggtgcgcgtgggg-------------------------------------- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1331076 19 + 114371477 g----------------gggcaggtgcggtggggg-------------------------------------- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1356904 19 + 1464242 g----------------gggcaggtgcggtggggg-------------------------------------- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1081644 19 + 81552678 g----------------gggcaggtgctgtggggg-------------------------------------- i nomLeu3.chr19 I 15 C 0 s rheMac8.chr13 1412273 19 + 108979918 g----------------gggcaagtgcagtggcgg-------------------------------------- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1384685 35 - 111193037 ggggcaagtgcagtggtgggcaggtgcagtgaggg-------------------------------------- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1413149 19 + 3644372 g----------------gggcaggtgcagtgaggg-------------------------------------- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1367107 19 - 10304083 G----------------GGGCAGGTGCAGCGGGGA-------------------------------------- i cerAty1.NW_012000820v1 I 151 C 0 s chlSab2.chr14 1442273 19 - 107702431 G----------------GGGCAGGTGCAGTGGGGA-------------------------------------- i chlSab2.chr14 I 676 C 0 s manLeu1.NW_012103754v1 920543 19 - 2200435 g----------------gggcaagtgcggtggggg-------------------------------------- i manLeu1.NW_012103754v1 C 0 I 178 s colAng1.NW_012118821v1 1351051 19 - 13651311 g----------------gggcaggtgtggtgggtg-------------------------------------- i colAng1.NW_012118821v1 C 0 I 51 s calJac3.chr14 1358955 57 - 108792865 g----------------gggcagaggtgggggggggcaggtgccagtagggggtaggtgcggtaggtaggtaG i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1296286 20 + 1864846 g----------------aggcaggtgtggttggg-------------------------------------ag i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 88652 18 + 287728 g----------------gggcaggtgcggtgggg--------------------------------------- i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89990502 5685 - 120129022 I e saiBol1.JH378218 1208092 515 - 7082604 I e otoGar3.GL873658 925551 3840 + 5252280 I e dasNov3.JH576208 1672441 387 + 4416731 I a score=125562.000000 s hg38.chr2_KI270774v1_alt 93154 16 + 223625 gcaggtgtggtggggg s panTro5.chr2A 1372878 15 + 111504155 gca-gtgcgtcggggg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1331095 16 + 114371477 gcaggtgcggtggggg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1356923 16 + 1464242 gcaggtgtggtggggg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1081663 16 + 81552678 gcaggtgtggtggggg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1412292 16 + 108979918 gcaggtgcagtgaggG i rheMac8.chr13 C 0 I 1 s macFas5.chr13 1384720 16 - 111193037 gcaggtgcggTGGGGG i macFas5.chr13 C 0 I 67 s macNem1.NW_012011978v1 1413168 16 + 3644372 gcaggtgcagtggggg i macNem1.NW_012011978v1 C 0 I 631 s cerAty1.NW_012000820v1 1367126 16 - 10304083 GCAGGTGCGGTAGGGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1442292 16 - 107702431 GCAGGTGCGGTagggg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 920740 16 - 2200435 GCAGGTGCGGTAGGGG i manLeu1.NW_012103754v1 I 178 C 0 s colAng1.NW_012118821v1 1351121 16 - 13651311 GCAGGTGCGGTagggg i colAng1.NW_012118821v1 I 51 C 0 s calJac3.chr14 1359012 16 - 108792865 GCAGGTGTGGTGGGGG i calJac3.chr14 C 0 I 18 s cebCap1.NW_016107827v1 1296306 16 + 1864846 gcaggtgtggtagggg i cebCap1.NW_016107827v1 C 0 I 235 s aotNan1.NW_018513311v1 88670 15 + 287728 -gaagcgtggtggggg i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89990502 5685 - 120129022 I e saiBol1.JH378218 1208092 515 - 7082604 I e otoGar3.GL873658 925551 3840 + 5252280 I e dasNov3.JH576208 1672441 387 + 4416731 I a score=46123.000000 s hg38.chr2_KI270774v1_alt 93170 15 + 223625 ctggtgccatgg-ggg s panTro5.chr2A 1372893 14 + 111504155 ctggtgccat-g-cgg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1331111 15 + 114371477 ctggtgccatgg-ggg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1356939 14 + 1464242 caggtgtggt-g-ggg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1081679 15 + 81552678 ctggtgccatgg-ggg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1412309 13 + 108979918 CAGGTGCAGTGG---G i rheMac8.chr13 I 1 C 0 s macFas5.chr13 1384803 16 - 111193037 ctggtgccgtggtaag i macFas5.chr13 I 67 C 0 s cerAty1.NW_012000820v1 1367142 16 - 10304083 Ctggtgccgtggtaag i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1442308 16 - 107702431 ctggtgccgtggtgag i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 920756 16 - 2200435 CTGGTGCCGTGGTAAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1351137 16 - 13651311 ctggtgccgtggtgag i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1359046 15 - 108792865 ctggtgcagtga-gtg i calJac3.chr14 I 18 C 0 s aotNan1.NW_018513311v1 88685 15 + 287728 caggtgcggTGG-GGG i aotNan1.NW_018513311v1 C 0 I 583 e mm10.chr12 89990502 5685 - 120129022 I e saiBol1.JH378218 1208092 515 - 7082604 I e cebCap1.NW_016107827v1 1296322 235 + 1864846 I e otoGar3.GL873658 925551 3840 + 5252280 I e dasNov3.JH576208 1672441 387 + 4416731 I e macNem1.NW_012011978v1 1413184 631 + 3644372 I a score=99668.000000 s hg38.chr2_KI270774v1_alt 93185 22 + 223625 ggacaggt---gccgtgagggg-cag s panTro5.chr2A 1372907 25 + 111504155 ggacagctgtcgccgtgggggg-cag i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1331126 23 + 114371477 ggacaggt---gccgtggggggacag i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1356953 22 + 1464242 ggacaggt---gccgtgggggg-cag i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1081694 22 + 81552678 ggacaggt---gctgtgggggg-cag i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1412322 22 + 108979918 GGGTAGGT---GCAGTGAGGGG-CAG i rheMac8.chr13 C 0 I 618 s macFas5.chr13 1384819 22 - 111193037 ggacaggt---gccgtggggag-cag i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1367158 22 - 10304083 ggacaggt---gccgtggggag-cag i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1442324 22 - 107702431 ggacaggt---gccgtggggag-cag i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 920772 22 - 2200435 GGACAGGT---GCCGTggggag-cag i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1351153 22 - 13651311 ggacaggt---gctatggggag-cag i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1359061 20 - 108792865 -gggaggt---gtcttgggg-g-cag i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 88700 583 + 287728 I e mm10.chr12 89990502 5685 - 120129022 I e saiBol1.JH378218 1208092 515 - 7082604 I e cebCap1.NW_016107827v1 1296322 235 + 1864846 I e otoGar3.GL873658 925551 3840 + 5252280 I e dasNov3.JH576208 1672441 387 + 4416731 I e macNem1.NW_012011978v1 1413184 631 + 3644372 I a score=204696.000000 s hg38.chr2_KI270774v1_alt 93207 52 + 223625 aaagatgctgg-tcaaaagtgaggg-tttcagttgcaggataaaaatg-ttctgg- s panTro5.chr2A 1372932 54 + 111504155 aaagatgctggctcaaaagtgagggctttcagtagcagg-taaaaatacttctga- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1331149 51 + 114371477 aaagatgctgg-tcaaaagtgaggg-tttcagttgcagg-taaaaatg-ttctgg- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1356975 52 + 1464242 aaagatgctgg-tcaaaagtgaggg-tttcagctgcaggataaaaatg-ttctgg- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1081716 52 + 81552678 aaagatgctgg-tcaaaggtgaggg-tttcagttgcaggataaaaatg-ttctgg- i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1384841 52 - 111193037 atagatactgg-tcaaaggtgagga-tttcagttgcaggataaaaatg-ttctgg- i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1367180 52 - 10304083 atagatactgg-tcaaaggtgagga-tttcagttgcaggataaaaatg-ttctgg- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1442346 52 - 107702431 atagatactgg-tcaaaggtgagga-tttcagttgcaggataaaaatg-ttctgg- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 920794 52 - 2200435 atagatactgg-tcaaaggtgagga-tttcagttgcaggataaaaatg-ttctgg- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1351175 52 - 13651311 atagatgctgg-tcaaaagtgaaga-tttcagttgcaggataaaaatg-ttctgg- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1359081 49 - 108792865 aaagatgctgg-tcaaaggtgaggg-tttcagttgtagggtaaaagcg-----gag i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 88700 583 + 287728 I e mm10.chr12 89990502 5685 - 120129022 I e saiBol1.JH378218 1208092 515 - 7082604 I e cebCap1.NW_016107827v1 1296322 235 + 1864846 I e otoGar3.GL873658 925551 3840 + 5252280 I e dasNov3.JH576208 1672441 387 + 4416731 I e macNem1.NW_012011978v1 1413184 631 + 3644372 I e rheMac8.chr13 1412344 618 + 108979918 I a score=102414.000000 s hg38.chr2_KI270774v1_alt 93259 23 + 223625 g-atctaatgtatagcttgatgac s panTro5.chr2A 1372986 21 + 111504155 ctatcta---tatgctttgatgac i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1331200 23 + 114371477 g-atctaatctatagcttgatgac i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1357027 23 + 1464242 g-atctaatgcatagcttgatgac i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1081768 23 + 81552678 g-atctaatgtatagcttgatgac i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1384893 23 - 111193037 g-atctaatgtacagcttgatgac i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1367232 23 - 10304083 g-atctaatgtacagcttgatgac i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1442398 23 - 107702431 a-atctaatgtacagcttgatgac i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 920846 23 - 2200435 g-atctaatgtacagcttgatgac i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1351227 23 - 13651311 g-atctaatgtatatcttgatgac i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1359130 23 - 108792865 g-atctaatgtgtagcttggcaac i calJac3.chr14 C 0 I 17 s saiBol1.JH378218 1208607 23 - 7082604 g-atctaatgtgtagcttggcgac i saiBol1.JH378218 I 515 I 17 e aotNan1.NW_018513311v1 88700 583 + 287728 I e mm10.chr12 89990502 5685 - 120129022 I e cebCap1.NW_016107827v1 1296322 235 + 1864846 I e otoGar3.GL873658 925551 3840 + 5252280 I e dasNov3.JH576208 1672441 387 + 4416731 I e macNem1.NW_012011978v1 1413184 631 + 3644372 I e rheMac8.chr13 1412344 618 + 108979918 I a score=676825.000000 s hg38.chr2_KI270774v1_alt 93282 111 + 223625 t--att-gtttatttgaaaatcgctaggagaatagatattaaatgttccta-tcacacacacaaaaggatga-atac-gtgaggt--gctgtatatgttaattagcttgatttaatcac s panTro5.chr2A 1373007 113 + 111504155 t--actagttta-ttgaaaatctctaggagaatagatatttaaagttcctattcacacacac-aaaggatgacatacaatgaggtgggctgt-tat-ttaattagtttgatttaatcac i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1331223 111 + 114371477 t--att-gtttatttgaaaatcgctaggagaatagatattaaatgttccta-tcacacacacaaaaggatga-atac-atgaggt--gctgtatatgttaattagtttgatttaatcac i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1357050 111 + 1464242 t--att-gtttatttgaaaattgctaggaaaatagatattaaatgttccta-tcacacacacaaaaggatga-atac-gtgaggt--gctgtatatgttaattagcttgatttaatcac i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1081791 113 + 81552678 tgcatt-gtttatttgaaaatcgctaggagaatagatattaaatgttccta-tcacacacacaaaaggacga-atat-gtgaggt--gctgtatatgttaattagcttgatttaatcac i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1384916 113 - 111193037 tgtatt-gtttatttgaaaatcgctaggagaataaatattaagtgttcgta-tcacacacacaaaaggatga-acat-gtgaggt--gctgtatatgttaattagcttgatttaatcac i macFas5.chr13 C 0 I 313 s cerAty1.NW_012000820v1 1367255 113 - 10304083 tgtatt-gtttatttgaaaatcgctaggagaataaatattaagtgttcgta-tcacacacacaaaaggatga-atat-gtgaggt--gctgtatatgttaattagcttgatttaatcac i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1442421 113 - 107702431 tgtatt-gtttatttgaaaatcgctaggagaataaatattaagtgttcgta-tcacacacacaaaaggatga-atat-gtgaggt--gctgtatatgttaattagcttgatttaatcac i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 920869 113 - 2200435 tgtatt-gtttatttgaaaatcgctaggagaataaatattaagtgttcgtg-tcacacacacaaaaggatga-gtat-gtgaggt--gctgtatatgttaattagcttgatttaatcac i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1351250 113 - 13651311 tgtatt-gtttatttgaaaatcactaggagaataaatattaagtgttcgca-tcgcacacacaaaacgatga-gtat-gtgaggt--gctgtatatgttaattagcttgatataatcac i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1359170 101 - 108792865 --tatt-gtttatttgaaaatt---------atagatcttaagtgttggta-tcacacacacaaaacaatga-gtat-gtga-gt--gctgtgtatgttaattagctggatttaatcac i calJac3.chr14 I 17 C 0 s saiBol1.JH378218 1208647 105 - 7082604 --tatt-gtttatttgaaaattgctag---aatagatcttaagtgttggta-tcacacacacaaaacgatga-gtat-gtga-gt--gcagtg--tgttaatcagcttgatttaatcac i saiBol1.JH378218 I 17 C 0 s cebCap1.NW_016107827v1 1296557 107 + 1864846 --tatt-gtttatttgaaaattgctag---aatagatcttaagtgttggta-tcacacacacagaacgatga-gtat-gtga-gt--gctgtgtatgttaattagcttgatttaatcac i cebCap1.NW_016107827v1 I 235 C 0 s aotNan1.NW_018513311v1 89283 107 + 287728 --tatt-gtttatttgaaaattgctgg---aataggtcttaagtgttggta-tcacacacacaaaacgatga-gtat-gtgg-gt--gctgtccatgttaattagcttgatgtaatcac i aotNan1.NW_018513311v1 I 583 C 0 e mm10.chr12 89990502 5685 - 120129022 I e otoGar3.GL873658 925551 3840 + 5252280 I e dasNov3.JH576208 1672441 387 + 4416731 I e macNem1.NW_012011978v1 1413184 631 + 3644372 I e rheMac8.chr13 1412344 618 + 108979918 I a score=743391.000000 s hg38.chr2_KI270774v1_alt 93393 83 + 223625 cccacagtgttta-catgtatgaaaacatca--tgtgaacataaatatgtataatttgtatttgttaatgatagcttgatgaagct s panTro5.chr2A 1373120 85 + 111504155 cccacaatgttcatcatgtatg-aaacatcaatcgtgaacataaatatgtgtaatttgtatttgttaattatagcttgatgaagct i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1331334 83 + 114371477 cccacaatgttta-catgtatgaaaacatca--cgtgaacataaatatgtgtaatttgtatttgttaattatagcttgatgaagct i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1357161 83 + 1464242 accacaatgttta-catgtatgaaaacatca--cgtgaacataaatatgtgtaatttgtatttgttaatgatagcttgatgaagct i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1081904 83 + 81552678 cccgcaatgttta-catgtatcaaagcatca--cgtgaacataaatatgtgtaatttgtattcgttaattatagctcgatgaagcc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1412962 83 + 108979918 cccacagtgttta-catgtatcaaaacatca--cgtgaacataaatctgtgtaatttttatttgttaatcatagcttgatgaagct i rheMac8.chr13 I 618 C 0 s macFas5.chr13 1385342 83 - 111193037 cccacaatgttta-catgtatcaaaacatca--cgtgaacataaatctatgtaatttttatttgttaatcatagcttgatgaagct i macFas5.chr13 I 313 C 0 s macNem1.NW_012011978v1 1413815 83 + 3644372 cccacaatgttta-catgtatcaaaacatca--cgtgaacataaatctatgtaatttttatttgttaatcatagcttgatgaagct i macNem1.NW_012011978v1 I 631 C 0 s cerAty1.NW_012000820v1 1367368 83 - 10304083 cccacaatgttta-catgtatcaaaacatca--catgaacataaatctatgtaatttttatttgttaatcatagcttgatgaagct i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1442534 83 - 107702431 cccacaatgttta-catgtatcaaaacatca--cgtgaacataaatctctgtaatttttatttgttaatcatagcttgacgaagct i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 920982 83 - 2200435 cccacaatgttta-catgtatcaaaacatca--tgtgaacataaatctatgtaatttttatttgttaatcgtagcttgatgaagct i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1351363 83 - 13651311 cccacaatgttta-catgtatcaaaacctca--cgtgaacacaaatgtatataatttttatttgttaattatagcttgatgaagct i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1359271 82 - 108792865 cccacagtattta-catgtgtcaaaacatca--catgaacataaatatatgtaatttttatt-gttaattatagcttcatgaagct i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1208752 82 - 7082604 cccacagtattca-catgtatcaaaacatca--aatgaacataaatatatgtaatttttatt-gttaattatagcttcgtgaagct i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1296664 82 + 1864846 cccacagtatttg-catgtatcaaaacatca--catgagtataaatatatgtaatttttatt-gttaattatagcttcatgaagct i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 89390 82 + 287728 cccacagtattta-catgtatcaaaacatca--catgaacataaatacatgtaatttttatt-gataattatagcttcgtggagct i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89990502 5685 - 120129022 I e otoGar3.GL873658 925551 3840 + 5252280 I e dasNov3.JH576208 1672441 387 + 4416731 I a score=894101.000000 s hg38.chr2_KI270774v1_alt 93476 112 + 223625 ggGGGCGAGGAAAACAAAAACTAAAAAGTGAATGGCAAGTAAAAAAGGCAA---CA-TCAGGCTGTAGTTTGAAGAACACAAG--GCAG-TCAGGCCCTG-GCCACATGTCAGGTGAGTC s panTro5.chr2A 1373205 108 + 111504155 ggGGG---AGAAAACAAACACT-AAAAGT-AAT-GCAAGAAAAAAGGCCAA--TCAGTGAGGCTGTAGTTTG-AGAACACAAG--GCAGTTCAGGCCCTGCGCCACATGTCAGCTGA-TC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1331417 111 + 114371477 ggGGGCGAGGAAAACAAAAACTAAAAAGTGAATGGCAAGAAAAAAGG-CAA---CA-TGAGGCTGTAGTTTGAAGAACACAAG--GCAG-TCAGGCCCTG-GCCACATGTCAGGTGAGTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1357244 112 + 1464242 ggGGGCGAGGAAAACAAAAACTAAAAAGTGAATGGCAAGTAAAAAAGGCAA---CA-TCAGGCTGTAGTTTGAAGAACACAGG--GCAG-TCAGGCCCTG-GCCACATGTCAGGTGAATC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1081987 112 + 81552678 ggGGGCGAGGAAAACAAAAACTAAAAAGTGAATGGCAAGTGAAAAAGGCAA---CA-TCAGGCTGTGGTTTGAAGAACACAAG--GCAG-TCAGGCCCTG-GCCACATGTCAGATGAGTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1413045 112 + 108979918 ggGGGTGGGGAAAACAAAAACTAAAAAGGGAATGGCAAGTAAAAAAGGCAC---CA-TCAAGCTGTAGTTTGAAGAACACAAG--GCAG-TCAGGCCCTG-GCCACATGTCAGGTGAGTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1385425 112 - 111193037 ggGGGTGGGGAAAACAAAAACTAAAAAGGGAATGGCAAGTAAAAAAGGCAC---CA-TCAAGCTGTAGTTTGAAGAACACAAG--GCAG-TCAGGCCCTG-GCCACATGTCAGGTGAGTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1413898 112 + 3644372 ggGGGTGGGGAAAACAAAAACTAAAAAGGGAATGGCAAGTAAAAAAGGCAC---CA-TCAAGCTGTAGTTTGAAGAACACAAG--GCAG-TCAGGCCCTG-GCCACATGTCAGGTGAGTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1367451 112 - 10304083 ggGGGTGGGGAAAACAAAAACTAAAAAGGGAATGGCAAGTAAAAGAGGCAC---CA-TCAGGCTGTAGTTTGAAGAACACAAG--GCAG-TCAGGCCCTG-GCCACATGTCAGGTGAGTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1442617 107 - 107702431 ggGGGTGGGGAAAACAAAAACTAAAAAGGGAATGGCAAGTAAAAAAGGCACCATCA-TCAGGCTGTAGTTTGAAGAACACA-----------AGGCCCCG-GCCACATGTCCGGTGAGTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 921065 112 - 2200435 ggGGGTGGGGAAAACAAAAACTAAAAAGGGAATGGCAAGTAAAAAAGGCAC---CA-TCAGGCTGTAGTTTGAAGAACACAAG--GCAG-TCAGGCCCTG-GCCACATGTCAGGTGAGTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1351446 112 - 13651311 ggGGGTGGGGAAAACAAAAACTAAAAAGCGAATGGCAAGTAAAAAAGGCAC---CA-TCAGGCTGTAGTTTGGAGAACACAAG--GCAG-TCAGGCCCCG-GCCACATGTCAGGTGAGTC i colAng1.NW_012118821v1 C 0 M 7155 s calJac3.chr14 1359353 112 - 108792865 ggGGGTGGGGAAAACTAAAACAAAAAAGCTAATGGCAAGTGATAAGGGCAA---CA-TCAGGCTGTAGTCTGAAGACCACGGT--GCAG-TCACACACTG-GCCACGTGTCAGGTGAGTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1208834 112 - 7082604 ggGTGTGGGGAAAACTAAAACAGAGAAGCTAAAGGCAAGTGAAAAGGGCAC---TG-TCAGGCTGTGGTTTGAAGACCACGCT--GCAG-TGACACGCTG-GCCACGTGTCAGGTGAGTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1296746 114 + 1864846 CGGGGTGGGGAAAACTAAAACAGAAAAGCTAATGGCAAGAGAAAAGGGCAA---TA-TCAGGCTGTGGTTTGAAGACTGCACTAAGCAG-TCACACCCTG-GCCATGTGTCAGGTGAGTG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 89472 112 + 287728 ggGGGTGGGGAAAACTAAAGCAGAAAAGCTAATGGCGAGTGAAAAGGGCAG---TA-TCGGGCTGTGGTTTGCAGACCACGAT--GCAG-TCACACACTG-GCCACGTGTCAGGTGAGTG i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1672828 91 + 4416731 ggagggggaggggacggaaataaataaataaatctttaaaaaaaaAGGAAT---TA-ACATGTT----------------AAT--GTGT-TGATCCCATGTGCTA------AGGTGAGTA i dasNov3.JH576208 I 387 C 0 e mm10.chr12 89990502 5685 - 120129022 I e otoGar3.GL873658 925551 3840 + 5252280 I a score=1803979.000000 s hg38.chr2_KI270774v1_alt 93588 254 + 223625 AAGTGTGAGCC-CA--CCCTG-GATCCCTTTTCTGT-T---ACAGTCACAGGCA--AGGGCCTATTACA-GGTGGT-----CCTGGGCCTCGG-TTAGGGAGAGC-CTCTTGTCTG-TGGACAGAACACA-----CGATGTCT-GCAGGGAGAAAGGTGGCC-TTTCTATGGAGACATCAAGCAAAATGTG-TGAT-TTGCTGTTTCT----------------------CATG-CATTGATCAAGGTATTCAG-TAATCAGATTTCCCCAGGATATCAAATAGTTCATTG--GCA-----CT-TGCCAA-AAAA s panTro5.chr2A 1373313 265 + 111504155 AAGTGTGAGCCACA--CCATGCGATCCCTTTT-TGTGT---ACAGTCACAGGCA--AGGG-CTATTACA-GGTGGT-----CCTGGGCCTCGGCTTAGGGAGCAC-CTC-TGTCTGTTGGACAGAACACATGGGTCGATGCCTGGCAGGGAAAAAGGTGGCCTTTTCTATGGAG-CA-CAAGCAAGAATTGCTGATCTTGCT-TTTC-----------------------CATGCCATTGATCCAGGTATACAG-TAATCAGA-TTCCCCAGGGTATCAAATAGTTCATTGGCGCA-----CTCTGCCAATAAAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1331528 254 + 114371477 AAGTGTGAGCC-CA--CCCTG-GATCCCTTTTCTGT-T---ACAGTCACAGGCA--AGGGCCTATTACA-GGTGGT-----CCTGGGCCTCGG-TTAGGGAGAGC-CTCTTGTCTG-TGGACAGAACACA-----CGATGCCT-GCAGGGAGAAAGGTGGCC-TTTCTATGGAGACATCAAGCAAAATGTG-TGAT-TTGCTGTTTCT----------------------CATG-CATTGATCAAGGTATTCAG-TAATCAGATTTCCCCAGGGTATCAAATAGTTCATTG--GCA-----CT-TGCCAA-AAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1357356 254 + 1464242 AAGTGTGAGCC-CA--CCCTG-GATCCCTCTTCTGT-T---ACAGTCACAGGCA--AGGGCCTATTACA-GGTGGT-----CCTGGGCCTCGG-TTAGGGAGAGC-CTCTTGTCTG-TGGACAGAACACA-----CAATGCCT-GCAGGGAGAAAGGTGGCC-TTTCTATGGAGACATCAAGCAAAATGTG-TGAT-TTGCTGTTTCT----------------------CATG-CATTGATCAAGGTATTCAG-TAATCAGATTTCTCCAGGGTATCAAATAGTTCATTG--GCA-----CT-TGCCAA-AAAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1082099 254 + 81552678 AAGGGTGAGCC-CA--CCCTG-GATCCCTTTTCTGT-T---ACAGTCACAGGCA--AGGGCCTATTACA-GGTGGT-----CCTCGGCCTCGG-TTAGGGAGAGC-CTCTTGTCTG-TGGACAGAACACA-----GGATGCCT-GCAGGGAGAAAGGTGGCC-TTTCTATGGAGACATCAAGCAAAATGTG-TGAT-TTGCTGTTTCT----------------------CATG-CATTGATCAAGGTATTCAG-TAATCAGATTTCCCCAGGGTATCAAATAGTTCATTG--GCA-----CT-TGCCAA-AAAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1413157 254 + 108979918 AAGCGTGAGCC-CA--TCCTG-GATCCCTATTCTGT-T---ACAGTCACGGGGA--GGGGTCCATGACC-AGTGGT-----CCTGGGTCCCAG-TTAGGGAGAAC-CTCTGGTCT--TAGACAGAACACA-----GGATGCCT-GCAGGGATAAAGGTGGCC-TTTGTGTGGAGACATTAAGCAAAATGTA-TGAT-TTGCTGTTTCT----------------------CATG-CATTGATCAAGGTATTCAG-TAGTCAGATTTCCCCAGGGTATCAAATAGTTCATTG--GCA-----CT-TGCCAAAAAAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1385537 254 - 111193037 AAGCGTGAGCC-CA--TCCTG-GATCCCTATTCTGT-T---ACAGTCACGGGGA--GGGGTCCATGACC-AGTGGT-----CCTGGGTCCCAG-TTAGGGAGAAC-CTCTGGTCT--TAGACAGAACACA-----GGATGCCT-GCAGGGATAAAGGTGGCC-TTTGTGTGGAGACATTAAGCAAAATGTA-TGAT-TTGCTGTTTCT----------------------CATG-CATTGATCAAGGTATTCAG-TAGTCAGATTTCCCCAGGGTATCAAATAGTTCATTG--GCA-----CT-TGCCAAAAAAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1414010 254 + 3644372 AAGCGTGAGCC-CA--TCCTG-GATCCCTATTCTGT-T---ACAGTCACGGGGA--GGGGTCCATGACC-AGTGGT-----CCTGGGTCCCAG-TTAGGGAGAAC-CTCTGGTCT--TAGACAGAACACA-----GGATGCTT-GCAGGGATAAAGGTGGCC-TTTGTATGGAGACATTAAGCAAAATGTA-TGAT-TTGCTGTTTCT----------------------CATG-CATTGATCAAGGTATTCAG-TAGTCAGATTTCCCCAGGGTATCAAATAGTTCATTG--GCA-----CT-TGCCAAAAAAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1367563 254 - 10304083 AAGCGTGAGCC-CA--CCCTG-GATCCCTATTCTGT-T---ACAGTCACGGGGA--GGGGTCCATTACC-AGTGGT-----CCTGGGTCCCGG-TTAGGGAGAAC-CTCTGGTCT--TAGACAGAACACA-----GGATGCCT-GCAGGGATAAAGGTGGCC-TTTGTGTGGAGACATTAAGCAAAATGTA-TGAT-TTGCTGTTTCT----------------------CATG-CATTGATCAAGGTATTCAG-TAGTCAGATTTCCCCAGGGTATCAAATAGTTCATTG--GCA-----CT-TGCCAAAAAAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1442724 254 - 107702431 AAGTGTGAGCC-CA--TCCTG-GATCCCTATTCTGT-T---ACAGTCACGGGGA--GGGGTCCATTACC-AGTGGT-----CCTGGGTCCCGG-TTAGGGAGAAC-CTCTGGTCT--TAGACAGAACACA-----GGATGCCT-GCAGGGATACAGGTGGCC-TTTGTGTGGAGACATTAAGCAAAATGTA-TGAT-TTGCTGTTTCT----------------------CATG-CATTGATCAAGGTATTCAG-TAGTCAGATTTCCCCAGGGTATCAAATAGTTCATTG--ACA-----CT-TACCAAAAAAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 921177 253 - 2200435 AAGCGTGAGCC-CA--TCCTG-GATCCCTATTCTGT-T---ACAGTCACGGGGA--GGGGTCCATTACC-AGTGGT-----CCTGGGTCCCGG-TTAGGGAGAAC-CTCTGGTCT--TAGACGGAACACA-----GGATGCCT-GCAGGGATAAAGGTGGCC-TTTGTGTGGAGACATTAAGCAAAATGTA-TGAT-TTGC-GTTTCT----------------------CATG-CATTGATCAAGGTATTCAG-TAGTCAGATTTCCCCAGGGTATCAAATAGTTCATTG--GCA-----CT-TGCCAAAAAAA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1359465 261 - 108792865 GAGCGAGAGCC-CA--CCCTG-GATCCCTTTTCTGT-G---ACGGTCACGGGGA--A-GGTCCATTCTATGGTGGT-----CCTGGGTCCCGG-CTGGGGAGAGC-CTCTTGTCTG-TGGACAGAACACG-----GAATGCCT-GCAGGGAGAAAGGTGGCA-TTTATGTGGAGGCATCCAGCGACACTTG-TGAT-TTGCTGCTTCT----------------------CATG-CATTGATCAAGGTGTTCAGCTAATCAGATGTCCCCAGGGTATCAAACAGTTCACCG--GCACTTACCT-TGCCAAAGAAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1208946 225 - 7082604 CAGTGAAAGCC-CA--GCCTG-GATCCCGCTTCTGT-G---AGGGTCACGGGGA--AGGGTCCATTCCGTGGTGGT-----CC----------------------------GTCTG-TGGACAGAACACA-----GAATGCCT-GCAGGGAGAAAGGTGGCA-CTTGTGTGGAGGCAG-CAGTGACACGTG-TGAT-TTGCTGCTTCT----------------------CATG-CATCGATCAAGGTATTCAGCGAATCAGATTTTCCCAGGGTGTCAAATCGTGCACTG--GCAGTTATCT-----------G i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1296860 262 + 1864846 CAGCGAGAGAC-CA--CCCTG-GATCCCTCCTCTGT-G---ACGGTCACGGGGA--AGGGTCCATTCCGTGGTGGT-----CCTGGGTCCCGG-TTCGGGAGAGC-CTCTTGTCTG-TGGACAGAACACA-----GAATGCCT-GCAGGGAGAAAGGTGGCA-TTTGTGTGGAGGCATCCAGTGACACGTG-TGAT-CTGCTGCTTCT----------------------CATG-CATTGATCAAGGTATTCAGCTAATCAGATTTCCCCAGGGTATCAAATAGTTCACTG--GCACTTACCT-TGCCAAAGAAA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 89584 262 + 287728 GAGCGAGAGCC-CA--CCCTG-GATCCCTTTTCTGT-G---ACGGTCACGGGGA--AGGGTCCATTCCGTGGTGGT-----CCTGGGTCCCCG-TTCGGGAGAGC-CTCTTGTCTG-TGGACAGAACACA-----GAATGCCT-GCAGGGAGAAAGGTGGCA-TTTGTGTGGAGGCACCCAGTGACACGTG-TGAT-TTGCTGCTGCT----------------------CGTG-CACTGATCAAGGTATTCAGCTAATCAGATTTCCCCAGGGTATCAAATAGTTCACTG--GCACTTACCT-TGCCAAAGAGA i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1672919 291 + 4416731 GAATTTGAACT-CAACTCCTG-G--CCTGTTTCTGC-TCACACAGTTAAGGACACTGAGGTCAATTTC--AGTGCTAGTTACCTGGTTCCGCT-GTACCAAGAACATTCTCATTTG-ATAGCTGAATCCA-----AAGGATTT-GCAAGGGAGAAAGAGCAT-TTTGGTAGAAGGTCTCAAGTGATAAATA-TCCT-TTAGTGTGTCCCCATTCTTTGATAATTACCAAGCCTG-CATGCATGAAAGTATTCAGTTAATCAGATTT-CCCATTCTATTAAATAGTTAATTG--GCAATTAACT-TACCCAAAAA- i dasNov3.JH576208 C 0 I 5336 e mm10.chr12 89990502 5685 - 120129022 I e otoGar3.GL873658 925551 3840 + 5252280 I e colAng1.NW_012118821v1 1351558 7155 - 13651311 M a score=423003.000000 s hg38.chr2_KI270774v1_alt 93842 64 + 223625 TGGAAGC-GTGCTTGTCTTCTCGGTGG---GCCCGGGACTGGAC-CGCAGGG-CTGGTGCCACTCCTTCA s panTro5.chr2A 1373578 66 + 111504155 TGGAAGC-ATGCTTGTCGTCTTTTTGGT--GGCCAGG-CTGGACGCGCAGGGCCTGCTGCCACTCCTTCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1331782 67 + 114371477 TGGAAGC-ATGCTTGTCGTCTTCTCGGTGGGCCCAGGACTGGAC-CGCAGGG-CTGGTGCCACTCCTTCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1357610 67 + 1464242 TGGAAGA-GTGCTTGTCGTCTTCTCGGTGGGCCCGGGACTGGAC-CGCAGGG-CTCGTGCCACTCCTTCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1082353 67 + 81552678 TGGAAGC-GTGCTTGTCGTCTTCTCGGTGGGCCCAGGACTGGAC-CGCAGGG-CTGGTGCCACTCCTTCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1413411 67 + 108979918 CGGAAGC-TTGCCTCTGGTCTTCTCGGTGGGCCCAGGACCGGAC-CGCAGGG-CTGGCGCCACTCCTTCG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1385791 67 - 111193037 CGGAAGC-TTGCCTCTGGTCTTCTCGGTGGGCCCAGGACCGGAC-CGCAGGG-CTGGCGCCACTCCTTCG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1414264 67 + 3644372 CGGAAGC-TTGCCTCTGGTCTTCTCGGTGGGCCCAGGACCGGAC-CGCAGGG-CTGGCGCCACTCCTTCG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1367817 67 - 10304083 CGGAAGC-TTGCCTATAGTCTTCTCAGTGGGCCCAGGACCGGAC-CAAAGGG-CTGGCGCCACTCCTTCG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1442978 67 - 107702431 CGGAAGC-TTGCCTATGGTCTTCTCGGTGGGCCCGGGACCGGAC-CGCAGGG-CTGGCGCCACTCCTTCG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 921430 67 - 2200435 CGGAAGC-TTGCCTCTGGTCTTCTCGGTGGGCCCAGGACCGGAC-CTCAGGG-CTGGCGCTACTCCTTCG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1359726 65 - 108792865 TGGAAGCAGTGCTTGCCGTCTTCTC---AGATGCGAGGCCAGAC-CGCAGGG-CTGGTGCCGCCCCTTCA i calJac3.chr14 C 0 I 1 s saiBol1.JH378218 1209171 63 - 7082604 TGGAAGT-GCGCTTACCGTCTTCTCGGTGGGTTCGAGGCCGGAC-TGCTGGG-CTG----CACGCCTTCA i saiBol1.JH378218 C 0 I 1 s cebCap1.NW_016107827v1 1297122 68 + 1864846 TGGAAGCAGTGCTTGCTGTCTTCTCGGTGGGTTCGAGGTTGGAC-CACAGGG-CTGGGGCCACTCCTTCA i cebCap1.NW_016107827v1 C 0 I 28 s aotNan1.NW_018513311v1 89846 68 + 287728 TGGAAGCAGTCCTTGCCGGCTTCTCGGTGGGTGTGAGGCCGGAC-CGCAGGG-CTGGTGCCACTCCTTCA i aotNan1.NW_018513311v1 C 0 I 1 e mm10.chr12 89990502 5685 - 120129022 I e otoGar3.GL873658 925551 3840 + 5252280 I e dasNov3.JH576208 1673210 5336 + 4416731 I e colAng1.NW_012118821v1 1351558 7155 - 13651311 M a score=608783.000000 s hg38.chr2_KI270774v1_alt 93906 104 + 223625 CTGAGACCTGCTTGTAGCAGGGCCCTGCATTCCCC-CATCCTGCCATGT-GTGAGTTGGCTTCTTACTGTATCATGCG--TTCCT-TGCAGATTTCTGTCTTCTTTGGA s panTro5.chr2A 1373644 101 + 111504155 CTGAGACCTGCTTGTAGCAGGG-CCTGCG-TCCCC-CATCCTGCAATGTGGTGAGTT-GCT--CTACTGTACCATGCG--TTCCTCTGCAGATTTCTGTCTTCCTTGGA i panTro5.chr2A C 0 I 22434 s panPan2.chr2A 1331849 104 + 114371477 CTGAGACCTGCTTGTAGCAGGGCCCTGCGTCCCCC-CATCCTGCCATGT-GTGAGTTGGCTTCTTACTGTACCATGCG--TTCCT-TGCAGATTTCTGTCTTCTTTGGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1357677 104 + 1464242 CTGAGACCTGCTTGTAGCAGGGCCCTGCATTCCCC-CATCCTGCCATGT-GTGAGTTGGCTTCTTACTGTACCATGCG--TTCCT-TGCAGATTTCTGTCTTCTTTGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1082420 104 + 81552678 CTGAGATCTGCTTGTAGCAGGGCCCTGCATTCCGC-CATCCTGATACAT-GTGAGTTGGCTTCTTACTGTACCATGCA--TTCCT-TGCAGATTTCTGTCTTATTTGGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1413478 103 + 108979918 ATGAGATCTGCTTCCAGCCAGCCCCCGCA-TTCCC-CATCCTGCTACGT-GTGAGTTGGCTCCCTAGTGTACCAAGCA--TTCCT-TGTAGATTTCCATCTTCTTTGGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1385858 103 - 111193037 ATGAGATCTGCTTCCAGCCAGCCCCCGCA-TTCCC-CATCCTGCTACGT-GTGAGTTGGCTCCCTAGTGTACCAAGCA--TTCCT-TGTAGATTTCCATCTTCTTTGGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1414331 103 + 3644372 ATGAGATCTGCTTCCAGCCAGCCCCCGCA-TTCCC-CATCCTGCTACGT-GTGAGTTGGCTCCCTAGTGTACCAAGCA--TTCCT-TGTAGATTTCCATCTTCTTTGGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1367884 103 - 10304083 ATGAGATCTGCTTCCAGCAGGCCCCCGCA-TCCCC-CATCCTGCTACGT-GTGAGTTGGCTCCCTAGTGTACCAAGCA--TTCCT-TGTAGATTTCCATCTTCTTTGGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1443045 103 - 107702431 ATGAGATCTGCTTCCAGCAGGCCCCCGCA-TCCCC-CATCCTGCTACGT-GTGAGCTGGCTCCCTAGTGTACTAAGCA--TTTCT-TGTAGATTTCCATCTTCTTTGGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 921497 103 - 2200435 ATGAGATCTGCTTTCAGCAGGCCCCTGCA-TTCCC-CATCCTGCTACGT-GTGAGTTGGCTCCCTAGTGTACCAAGCA--TTCCT-TGTAGATTTCCATCTTCTTTGGA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1359792 104 - 108792865 ACGAGGTCTGCTTCCAGCGGGGCCCTGCA-TTCCCCCATCCTGCTACGA-GTGAGTTGGCTTCATGCTGTATGATGCA--TTCCT-TGTAGATTTCTGTCTTGTTTGGA i calJac3.chr14 I 1 C 0 s saiBol1.JH378218 1209235 104 - 7082604 ACGAGGTCTGCTTCCAGCGGGGCCCTGCG-TCCCCACATCCTGCTACGA-GTGAGTTGGCTTCACGCTGTGCGATGCA--TTGCT-CGCAGATTTCTGTCTTCTTTGGA i saiBol1.JH378218 I 1 C 0 s aotNan1.NW_018513311v1 89915 104 + 287728 ACGAGGTCTGCTTCCA-CGGGGCCCTGCG-CTCCC-CACCCTGCTACGA-GTGAGTTGGCTTCATGCTGTGCGATGCATTTTCCT-TGTACATTTCTGTCTTCTTCGCA i aotNan1.NW_018513311v1 I 1 C 0 e mm10.chr12 89990502 5685 - 120129022 I e cebCap1.NW_016107827v1 1297190 28 + 1864846 I e otoGar3.GL873658 925551 3840 + 5252280 I e dasNov3.JH576208 1673210 5336 + 4416731 I e colAng1.NW_012118821v1 1351558 7155 - 13651311 M a score=240932.000000 s hg38.chr2_KI270774v1_alt 94010 32 + 223625 GCTCCTTGATTTTTCTCATAATGGGAGAAGAC s panTro5.chr2A 110120739 32 - 111504155 GCTCCTTGATTTTTCTCATAATGGGAGAAGAC i panTro5.chr2A n 22434 C 0 s panPan2.chr2A 1331953 32 + 114371477 GCTCCTTGATTTTTCTCATACTGGGAGAAGAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1357781 32 + 1464242 GCTCCTTGATTTTTCTCATAATGGGAGAAGAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1082524 32 + 81552678 GTTCCTTAATTTTTCTCATAATGGGAGAAGAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1413581 32 + 108979918 GCGCCTTGATTTTTCTCATAATGGGAGAAGAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1385961 32 - 111193037 GCGCCTTGATTTTTCTCATAATGGGAGAAGAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1414434 32 + 3644372 GCGCCTTGATTTTTCTCATAATAGGAGAAGAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1367987 32 - 10304083 GCGCCTTGATTTTTCTCATAATGGGAGAAGAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1443148 32 - 107702431 GCGCCTTGATTCTTCTCATAATGGGAGAAGAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 921600 32 - 2200435 GCGCCTTGATTTTTCTCATAATGGGAGAAGAC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1359896 32 - 108792865 GCTTCTTGATTTTTCTCATAATGGGAGAAGAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1209339 31 - 7082604 GCTTCTTGATTTTTCTCCTAATGGGAGAA-AC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 90019 32 + 287728 GCGTCTTGGTTTTTCTCATAATGGGAGAAGAC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89990502 5685 - 120129022 I e cebCap1.NW_016107827v1 1297190 28 + 1864846 I e otoGar3.GL873658 925551 3840 + 5252280 I e dasNov3.JH576208 1673210 5336 + 4416731 I e colAng1.NW_012118821v1 1351558 7155 - 13651311 M a score=1945693.000000 s hg38.chr2_KI270774v1_alt 94042 255 + 223625 GTGTATTTTTTTCTTTCCTTCTCATGGCTAAAACTGTCCTCTTTCTCACTGAGTCT-CCCCTGCAATCTCTCTGCTCTCCATTGCTGGGTGGCCACGTCTTCCCAATGCTCCTTTCTGACAGAGACTGGGGGCTTCAGCCAGATCTTTAGTTGCCTCTCTTTCATTCTCCCATTATGTGATAGCCTCGGGTTTTCCACGTCCCCCTGCAGAAATCTTCCTTCCCAAGTCCCCCGTCTTCTTTCTCAAAAATGTGTG s panTro5.chr2A 110120771 255 - 111504155 GTGTATTCTTTTCTTTCCTTCTCATGGCTAAAACTGTCCTCTTTCTCACTGAGTCT-CCCCTGCAATCTCTCTGCTCTCCATTGCTGGGTGGCCACGTCTTCCCAATGCTCCTTTCTGACAGAGACTGGGGGCTTCAGCCAGATCTTTAGTTGCCTCTCTTTCATTCTTCCATTATGTGATAGCCTCGGGTTTTCCATGTCCCCCTGCAGAAATCTTCCTTCCCAAGTCCCCCGTCTTCTTTCTCAAAAATGCGTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1331985 255 + 114371477 GTGTATTCTTTTCTTTCCTTCTCATGGCTAAAACTTTCCTCTTTCTCACTGAGTCT-CCCCTGCAATCTCTCTGCTCTCCATTGCTGGGTGGCCACGTCTTCCCAATGCTCCTTTCTGACAGAGACTGGGGGCTTCAGCCAGATCTTTAGTTGCCTCTCTTTCATTCTTCCATTATGTGATAGCCTCGGGTTTTCCATGTCCCCCTGCAGAAATCTTCCTTCCCAAGTCCCCCGTCTTCTTTCTCAAAAATGCGTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1357813 255 + 1464242 GTGTATTTTTTTCTTTCCTTCTCATGGCTAAAACTGTCCTCTTTCTCACTGAGTCT-CCCCTGCAATCTCTCCGCTCTCCATTGCTGGGTGGCCACGTCTTCCCAATGCTCCTTTCTGACAGAGACTGGGGGCTTCAGCCAGATCTTTAGTTGCCTCTCTTTCATTCTTCCATTATGTGATAGCCTCGGGTTTTCCACGTCCCCCTGCAGAAATCTTCCTTCCCAAGTCCCCCATCTTCTTTCTCAAAAACGTGTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1082556 254 + 81552678 GTGTATTCTTTTCTTTCCTTCTCATGGCTAAAACTGTCCTCTTTCTCACTGAGTCT-CCCCTGCAGTCTCTCCGCTCTCCATTGCTGGGTGGCCACATCTTCCCAGTGCGCCTTCCTGACAGAGACCAGGGACTTCAGCCAGATCTTTAGTTGCCTCTCTTTCATTCTTTCGTTATGTGATA-CCTCAGGTTTTCCACGTCCCCCTGCAGAAATCTTCCTTCCTAAGTCCCCCGTCCTCTTTCTCAAAAACGTGTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1413613 253 + 108979918 ATGTATTCTTTTCTTTCCTTCTCATGGCTAAAACTGTCCTCTTTCTCACCGAGTCT-CCCCTGCAATCTCTCCGCTCTGCGTCGCTGGGTGACCACGTCTTCCAAATGCTCCTTCCTGACACAGCCTGGGGGCTTCAGCCAGATCTTTAGTTGC--CTCTTTCATTCTTCCATTATGTGACACCCTTGAGTTTTCCATTTCTCCCTGCAGAAATCTTCCTTCCCAACTCCCCCGTCCTCTTTCTCCAAAACATGTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1385993 253 - 111193037 ATGTATTCTTTTCTTTCCTTCTCATGGCTAAAACTGTCCTCTTTCTCACCGAGTCT-CCCCTGCAATCTCTCCGCTCTGCGTCGCTGGGTGACCACGTCTTCCAAATGCTCCTTCCTGACACAGCCTGGGGGCTTCAGCCAGATCTTTAGTTGC--CTCTTTCATTCTTCCATTATGTGACACCCTTGAGTTTTCCATTTCTCCCTGCAGAAATCTTCCTTCCCAACTCCCCCATCCTCTTTCTCCAAAACATGTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1414466 253 + 3644372 ATGTATTCTTTTCTTTCCTTCTCATGGCTAAAACTGTCCTCTTTCTCACCGAGTCT-CCCCTGCAATCTCTCCGCTCTGCGTCGCTGGGTGACCACGTCTTCCAAATGCTCCTTCCTGACACAGCCTGGGGGCTTCAGCCAGATCTTTAGTTGC--CTCTTTCATTCTTCCATTATGTGACACCCTTGAGTTTTCCATTTCTCCCTGCAGAAATCTTCCTTCCCAACTCCCCCGTCCTCTTTCTCCAAAACATGTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1368019 255 - 10304083 GTGTATTCTTTTCTTTCCTTCTCGTGGCTAAAACTGTCCTCTTTCTCACCGAGTCT-CCCCTGCAATCTCTCCGCTCTGCGTCGCTGGGTGACCACGTCTTCCAAATGCTCCTTCCTGACAGAGCCTGGGGGCTTCAGCCAGATCTTTAGTTGCCTCTCTTTCATTCTTCCATTATGTGACACCCTTGGGTTTTCCATTTCTCCCTGCAGAAATCTTCCTTCCCAACTCCCCCGTCCTCTTTCTCCAAAACATGTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1443180 255 - 107702431 GTGTATTCTTTTCTTTCCTTCTCGTGGCTAAAACTGTCCTCTTTCTCACCGAGTCT-CCCCTGCAATCTCTCCGCTCTGCGTCGCTGGGTGACCACGTCTTCCAAATGCTCCTTCCTGACAGAGCCTGGGGGCTTCAGCCAGATCTTTAGTTGCCTCTCTTTCATTCTTCCATTATGTGACACCCTTGGGTTTTCCATTTCTCCCTGCAGAAATCTTCCTTCCCAACTCCCCTGTCCTCTTTCTCCAAAACACGTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 921632 255 - 2200435 GTGTATTCTTTTCTTTCCTTCTCGTGGCTAAAACTGTCCTCTTTCGCACCGAGTCT-CCCCTGCAATCTCTCCGCTCTGCGTCGCTGGGTGACCACGTCTTCTAAATGCTCCTTCCTGACAGAGCCTGGGGGCTTCAGCCAGATCTTTAGTTGCCTCTCTTTCATTCTCCCATTATGTGACACCCTTGGGTTTTCCATTTCTCCCTGCAGAAATCTTCCTTCCCAACTCCCCCGTCCTCTTTCTCCAAAACATGTG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1359928 244 - 108792865 CTGTATTC------TTTCTTCCCAAGGCTAAAGCTGTC--CTTTCTCACTGAGTCTGTCCCTGGAATCTCTCAGCTCTGCGTTGCTGGGTGGCCACATCTTCCAAACGCTCCCACCTGACAGAGACGGG-GGCTTCGCTCAGATCTTTAGATGC--CTCTTTAATTCTTCCATGATGTGACACCCTCAGGTTTTCCATTTC-CCTTGTGGAACTCTTCGTTCCCAAGTTCCCCGGCCGTCTCCTCAAAAATGTGTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1209370 249 - 7082604 GTGTATTCTTTTCTTTTCTTCTCATGGCTAAAGCTGTC--CTTTCTCCCTGAGTCTGTCCCTGGAATGTCTCAGCCCTGCGTTGCTGGGTGACCACATCTTCCAAATGCTCCCACCTGACAGAGCCGGA-CGCTTCGCTCAGATC-TTAGATGCCTCTCTTTAATTCTTCCAGGATGTGACACCCTCAGGTTTTCCATTTT-CCCTGTGGAACGCCTCCTTCCCAAGTCCCCCGGCCCCTTCCTCGAAAC--GGTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1297218 253 + 1864846 GTGTATTCTTTTCTTTTCTTCTCATGGCTAAAGCTGCC--CTTTCTCACTGAGTCTGTCCCTGGAACCTCTCAGCTCTGCGTTGCTGGGTGGCCACATCTGCCAAATGCTCCCACCTGACAGAGACGGGAGGCTTCGCTCAGATGTTTAGATGCCTCTCTTTAATTCTTCCATGATGTGACACCCTCAGGTTTTCAACTTT-CCCTGTGGAACTCTTCCTTCCCAAGTCCCCCAGCCTCTTCCTCAAAAATGTGTG i cebCap1.NW_016107827v1 I 28 I 44 s aotNan1.NW_018513311v1 90051 253 + 287728 GTGTATTCTTTTCTTTTCTTCTCATGGCGAAAGCTGTC--CTTTCTCACCGAGTCTGTCCCTGGAATCTCTCAGCTCTGCGTTGCTGGGTGGCCACATCTTCCGAATGCTCCCACCTGACAGAGACGGGGGGCATCGCTCAGATCTCCAGATGCCTCTCTTTAATTCTTCCGTGATGTGACACCCTCAGGTTTTCCATTTC-CCCTGCGGGACTCTTCCTTCCCAAGTCCCCCGGCCTCTTCCTCAGAAACGTGTG i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89990502 5685 - 120129022 I e otoGar3.GL873658 925551 3840 + 5252280 I e dasNov3.JH576208 1673210 5336 + 4416731 I e colAng1.NW_012118821v1 1351558 7155 - 13651311 M a score=283313.000000 s hg38.chr2_KI270774v1_alt 94297 48 + 223625 TGCTATCCAGTGGGCCTCCTGCAAACCCGCCATTCTCAGACT-TTTCTC s panTro5.chr2A 110121026 48 - 111504155 TGCTATCCAGTGGGCCTCCTGCAAACCCACCATGCTCAGACT-TTTCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1332240 48 + 114371477 TGCTATCCAGTGGGCCTCCTGCAAACCCGCCATGCTCAGACT-TTTCTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1358068 48 + 1464242 TGCTATCCAGTGGGCCTCCTCCAAACCCACCATTCTCAGACT-TTTCTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1082810 48 + 81552678 TGCCGTCCAATGGGCCTCCTCTAAACCCGCCATTCTCAGACT-TTTCTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1413866 48 + 108979918 TGCCGTCCAGTGGGCCTTCTCCAAACCCGCCATTCTCAGGCT-TTTGTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1386246 48 - 111193037 TGCCGTCCAGTGGGCCTTCTCCAAACCCGCCATTCTCAGGCT-TTTGTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1414719 48 + 3644372 TGCCGTCCAGTGGGCCTTCTCCAAACCCGCCATTCTCAGGCT-TTTGTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1368274 48 - 10304083 TGCCGTCCAGTGGGCCTTCTCCAAACCCGCCATTCTCAGACT-TTTGTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1443435 48 - 107702431 TGCCGTCCAGTGGGCCTTCTCCAAACCCGCCATTCTCAGGCT-TTTGTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 921887 48 - 2200435 TGCTGTCCAGTGGGCCTTCTCCAAACCCGCCATTCTCAGACT-TTCGTC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1360172 46 - 108792865 TGCCGTTCAGTGGGTCTGCTCCAAGCCAGCCCTTCTCAGAGT-TTTC-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1209619 47 - 7082604 TGCCATGCGGTGGGTCATCTCCACGCCAGCCCTTCTCAGAGCGTTTC-- i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 90304 47 + 287728 TGCCGTGCAGCGGGTCTTCTCCAAGCCAGCCCTTCTCAGAGTTTCTC-- i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89990502 5685 - 120129022 I e cebCap1.NW_016107827v1 1297471 44 + 1864846 I e otoGar3.GL873658 925551 3840 + 5252280 I e dasNov3.JH576208 1673210 5336 + 4416731 I e colAng1.NW_012118821v1 1351558 7155 - 13651311 M a score=2293052.000000 s hg38.chr2_KI270774v1_alt 94345 304 + 223625 CGCTCCCCTCTCAACATTTCCAGTGTAAC---AGCTTCCATTGTACTTGATGCATTATTTATATTGTTTAATTAGTATTAAAATAAGCACATCATGTAATCCAGCTAAAATATGTATTTTCAAATGATAGATACATTTCTCATATTTGTGCGGGGTCAAATGGTAACAGCAACTTAGAGGAGAGGCTACAAAACGACCTGGAGAGTTGATGTGCCGGCTCGGCCTCCC----CCAGCTGTGCATGCAAACCCCCTCTT---CCCAGGTCTCCATCGGCACTCGGCATTTTCAAGCGTCCTTCTGTGATGAAAAG s panTro5.chr2A 110121074 304 - 111504155 CGCTCACCTCTCAACATTTCCAGTGTAAC---AGCTTCCATTGTACTTGATGCATTATTTATATTGTTTAATTAGTATTAAAATAAGCACATCATGTAATCCGGCTAAAATATGTATTTTCAAATGATAGATACATTTCTCATATTTGTGCGGGGTCAAATGGTAACAGCAACTTAGAGGAGAGGCTACAAAACGACCTGGAGAGTTGATGTGCCGGCTCGGCCTCCC----CCAGCTGTGCATGCAAACCCCCTCTT---CCCAGGTCTCCATGGGCACTCGGCATTTTCAAGCGTCCTTCTGTGATGAAAAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1332288 304 + 114371477 TGCTCACCTCTCAACATTTCCAGTGTAAC---AGCTTCCATTGTACTTGATGCATTATTTATATTGTTTAATTAGTATTAAAATAAGCACATCATGTAATCCAGCTAAAATATATATTTTCAAATGATAGATACATTTCTCATATTTGTGCGGGGTCAAATGGTAACAGCAACTTAGAGGAGAGGCTACAAAACGACCTGGAGAGTTGATGTGCCGGCTCGGCCTCCC----CCAGCTGTGCATGCAAACCCCCTCTT---CCCAGGTCTCCATGGGCACTCGGCATTTTCAAGCGTCCTTCTGTGATGAAAAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1358116 304 + 1464242 TGCTCACCTCTCAACATTTCCAGTGTAAC---AGCTTCCATTGTACTTCATGCATTATTTATATTGTTTAATTAGTATTAAAATAAGCACATCACATAATCCAGCTAAAACATGTATTTTCAAATGATAGATACATTTCTCATATTTGTGCGGGGTCAAATGGTAACAGCAACTTAGAGGAGAGGCTACAAAACGACCTGGAGAGTTGATGTGCCGGCTCGGCCTCCC----CCAGCTGTGCATGCAAACCCCCTCTT---CCCAGGTCTCCATCGGCACTCGGCATTTTCAAGCGTCCTTCTGTGATGAAAAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1082858 304 + 81552678 CACTCACCTCTCAACATTTCCAGTGTAAC---AGCTTCCATTGTACTTGATGCATTATTTATATTGTTTAATTAGTATTAAAATAAGCACATCACATAATCCAGCTAAAATATGTATTTTCAAATGATAGATACATTTCTCATGTTTGTGTGGGGTCAAATGGTAACAGCAACTTAGAGGAGAGGCTACAAAATGCCCTGGAGAGGTGATGTGCTGGCTCGGCCTCCC----CCAGCCGTGCGTGCAAAACCCCTCTC---CCCAGGTCTCCATCGTCACTCCGCATTTTCAAGCATCCTTCTGTGATGAAAAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1413914 304 + 108979918 CGCTCACCTCTCAACATTTCCAGTGTAAC---AGCTTCCATCGTACTCGCTGCATTATTTATACTGTTTAATTAGTATTAATATAAGCA---CATATAATCTAGCTAAAATATGTATTTTCAAATGATAGATACGTTTCTCATATTTGTGCATGGTCACTTGGTAACAGCAACTTAGAGGAGAGGCTACAAAACGCCCTGGAGAGGTGAAGTGCCGGCTCAGCCTCCC----CCAGCCGTGCGCGCAAACCCCTTCTTCTCCCCAGGTCTCCATCGGCACTTGGCATTTTCAAGTGTCCTTCTGTGATGAAAAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1386294 304 - 111193037 CGCTCACCTCTCAACATTTCCAGTGTAAC---AGCTTCCATCGTACTCGCTGCATTATTTATACTGTTTAATTAGTATTAAAATAAGCA---CATATAATCTAGCTAAAATATGTATTTTCAAATGATAGATACGTTTCTCATATTTGTGCATGGTCACTTGGTAACAGCAACTTAGAGGAGAGGCTACAAAACGCCCTGGAGAGGTGAAGTGCCGGCTCAGCCTCCC----CCAGCCGTGCGCGCAAACCCCTTCTTCTCCCCAGGTCTCCATCGGCACTTGGCATTTTCAAGTGTCCTTCTGTGATGAAAAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1414767 304 + 3644372 CGCTCACCTCTCAACATTTCCAGTGTAAC---AGCTTCCATTGTACTCGCTGCATTATTTATACTGTTTAATTAGTATTAAAATAAGCA---CATATAATCTAGCTAAAATATGTATTTTCAAATGATAGATACGTTTCTCATATTTGTGCATGGTCACTTGGTAACAGCAACTTAGAGGAGAGGCTACAAAACGCCCTGGAGAGGTGAAGTGCCGGCTCAGCCTCCC----CCAGCCGTGCGCGCAAACCCCTTCTTCTCCCCAGGTCTCCATTGGCACTTGGCATTTTCAAGTGTCCTTCTGTGATGAAAAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1368322 305 - 10304083 CGCTCAC--CTCAACATTTCCAGTGTAAC---AGCTTCCATTGTGCATGATGCATTATTTATACTGTTTAATTAGTATTAAAATAAGCACACCATGTAATCTAGCTAAAATATGTATTTTCAAATGATAGATACGTTTCTCATATTTGTGCAGGGTCACTTGGTAACAGCAACTTAGAGGAGAGGCTACAAAACGCCCTGGAGAGGTGAAGTGCCGGCTCGGCCTCCC----CCAGCCGTGCGTGCAAACCCCTTCTTCTCCCCAGGTCTCCATCGGCACTCGGTGTTTTCAAGTGTCCTTCTGTGATGAAAAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1443483 307 - 107702431 CGCTCACGTCTCAACATTTCCAGTGTAAC---AGCTTCCATTGTACTTGATGCATTATTTATACTGTTTAATTAGTATTAAAATAAGCACATCATGTAATCTAGCTAAAATACGTATTTTCAAATGATAGATACGTTTCTCATATTTGTGCAGGGTCACTTGGTAACAGCAACTTAGAGGAGAGGCTACAAAACGCCCTGGAGAGGTGATGTGCCGGCTTGGCCTCCC----CTAGCCGTGCGCACAAACCCCTTCTTCTCCCCAGGTCTCCATCGGCACTCGGCGTTTTCAAGTGTCCTTCTGTGATGAAAAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 921935 307 - 2200435 CGCTCACCTCTCAACATTTCCAGTGTAAC---AGCTTCCATTGTACTCGCTGCATTATTTATACTGTTTAATTAGTATTAAAATAAGCACATCATGTAGTCTAGCTAAAATATGTATTTTCAAATGATAGATACGTTTCTCACATTTGTGCAGGGTCACTTGGTAACAGCAACTTAGAGGAGAGGCTACAAAACGCCCTGGAGAGGTGAAGTGCCGGCTCGGCCTCCC----CTAGCCGTGCGCGCAAACCCCTTCTTCTCCCCAGGTCTCCATCGGCACTCGGTGTTTTCAAGTGTCCTTCTGTGATGAAAAG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1360218 301 - 108792865 CACTCACCTCTCAGCATTTCCAGCAGAACTTACGCTTCTATTTTACTTGGCACATTATTTGTATTGTTTAATTGGTATTAAA-----CACATAATATAATCTAGGTAAAATATATATTTCCAAATGATGGGCACATTTCTCATATTTGTGCTGGATCACGTGGTAAGAGCATCCTAGAGGAGAGACTGGAAAACGCCGCAGAGAGGTGGCGTGGCGGCTCAGCCTCCTGGGGCCGGCCGTGCGCGCAGTCCCCTCT-----CCCAGGTCCCCATCAGCACTGGGCGTTTTCAAGTGTC---CTGTGATGGAAAG i calJac3.chr14 C 0 I 1 s saiBol1.JH378218 1209666 304 - 7082604 CACTCACCTCTCAGCATTTCCAGCATAACGTAAGCTTCTGTTTTACTTGGTGCATTATTTATATTGCTTAATTAGCATTAAA-----CACATAATATAATCTAGCTAAAATATGTATTTCCAAATGATGGGTGCATTTCCCATATTTGTGCTGGATCAAATGGTAAGAGCATCCTAGAGGGGAGGCCAGAAAAAGACCCGGAGAGGTGGTGTCGCGGCTCGGCCCCCCGGGGCCGGCCCAGCACGCAACCCCCTCT-----GCCAGGTCGCCCTCGGCACTGGGCGTTTTCAAGTGTCCTTCTGTGATGGAAAG i saiBol1.JH378218 C 0 I 1 s cebCap1.NW_016107827v1 1297515 301 + 1864846 CACTCACCTCTCAGCATTTCCAGCATCACTGAAGCTTCTGTTTTACTTGGCACATTATTTATATTGTTTAATTAGTATTAAA-----CACATAATATAATCTAGCCGAAATATGTATTTCCAAATGATGGGTACATTTCTCATATTTGTGCTGGATCAAATGGTAAGAGCATCCTAGAGGGGAGGCTGGAAAACGCCCCGGAGAGGTGGTGTGGGGGCTCAGCCTCCCGGGGCCGGCCGTGCACGCAATCCCCTCT-----CCCAGGTCGCCCTCAGCACTGGGCGTTTTCAAGTGTC---CTGTGATGGAAAG i cebCap1.NW_016107827v1 I 44 I 1 s aotNan1.NW_018513311v1 90351 300 + 287728 CACTCACCTCTCGGCATTTCCAGCATAACTTAAGCTTCTATTTTACTTGGCGCATTATTTATATTGTTTAATTAGTATTAAA-----CACATAATATAATCTAGCTAAAATATGTATTTCCAAATGATGGGTACATCTCTCATATTTGTCCTGGACCAAATGGTAAGAGCATCCTGGAGGAGAGGCTGGAAAACGCCCCGGAGAGGTGGTGTGGCGGCTCAGCCTCCC-GGGCCGGCCGTGCACGCGGTCCCCTCT-----CCCAGG-CGCCATCAGCACCGGGCA--CTCAAGTGTCCCTCTGTGATGGAAGG i aotNan1.NW_018513311v1 C 0 I 34 e mm10.chr12 89990502 5685 - 120129022 I e otoGar3.GL873658 925551 3840 + 5252280 I e dasNov3.JH576208 1673210 5336 + 4416731 I e colAng1.NW_012118821v1 1351558 7155 - 13651311 M a score=209843.000000 s hg38.chr2_KI270774v1_alt 94649 34 + 223625 AGCATCCAGTCAGTATTTACTTTACATTTTAATG s panTro5.chr2A 110121378 34 - 111504155 AGCATCCAGTCAGTATTTACTTTACATTTTAATG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1332592 34 + 114371477 AGCATCCAGTCAGTATTTACTTTACATTTTAATG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1358420 34 + 1464242 AGCATCCAGTCAGTATTTCCTTTACATTTTAATG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1083162 34 + 81552678 AGCATCCAGTCAGTATTTACTTTACATTTTAATG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1414218 34 + 108979918 AGCGTCCAGTCAGTATTTAATTTACATTTTAATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1386598 34 - 111193037 AGCGTCCAGTCAGTATTTAATTTACATTTTAATG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1415071 34 + 3644372 AGCGTCCAGTCAGTATTTAATTTACATTTTAATG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1368627 34 - 10304083 AGCATCCAGTCAGTATTTAATTTACATTTTAATG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1443790 33 - 107702431 AGTGTCCAGTCAGTATTTAATTTACA-TTTAATG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 922242 34 - 2200435 AGCATCCAGTTAGTATTTAATTTACATTTTAATG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1360520 34 - 108792865 AACGCCTGGTCAGTGTTCAATTCACACCTGAATC i calJac3.chr14 I 1 C 0 s saiBol1.JH378218 1209971 34 - 7082604 AATGTCCGGACAGCATTTAATCCACACCTTAATG i saiBol1.JH378218 I 1 C 0 s cebCap1.NW_016107827v1 1297817 34 + 1864846 AACGTCTGGTCAGCGTTCTATTCACAGCTTCATG i cebCap1.NW_016107827v1 I 1 C 0 e aotNan1.NW_018513311v1 90651 34 + 287728 I e mm10.chr12 89990502 5685 - 120129022 I e otoGar3.GL873658 925551 3840 + 5252280 I e dasNov3.JH576208 1673210 5336 + 4416731 I e colAng1.NW_012118821v1 1351558 7155 - 13651311 M a score=2025907.000000 s hg38.chr2_KI270774v1_alt 94683 256 + 223625 CTTTCTTCTTCAAACTCTTCCTTGAGTATTTGC--CCCACGCTGTCTCATTTTACCACCCACCTTTCTGGCTGTGTGAATTTCCTGCGAATGCC-TTAACAAAGGGCCACGTGCTTAGTGGCTT----------------TACTCCATCAGCTCCGGAGGTCATAGATCCAAATGAGACTTTTGGCAGCAAGGTCCAGGGACAGGCCTGGTTGTGCCTGGAGACCCC-AGAGGCCCTgctcctggcctcctccagtttctggaggctcatggccac s panTro5.chr2A 110121412 256 - 111504155 CTTTCTTCTTCAAACTCTTCCTTGAGTATTTGC--CCCACACTGTCTCATTTTACCACCCACCTTTCTGGCtgtgtgaatttcctgtgaatgcc-ttaacaaagggccacatgcttagtggctt----------------tactccatcagctccggaggtcatagatccaaatgagacttttggcagcaaggcccagggacagggctggttgtgcctggagacccc-agaggccctgctcctggcctcctccagtttctggaggctcatggccat i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1332626 256 + 114371477 CTTTCTTCTTCAAACTCTTCCTTGAGTATTTGC--CCCACACTGTCTCATTTTACCACCCACCTTTCTGGCtgtgtgaatttcctgtgaatgcc-ttaacaaagggccacatgcttagtggctt----------------tactccatcagctccggaggtcatagatccaaatgagacttttggcagcaaggcccagggacaggactggttgtgcctggagacccc-agaggccctgctcctggcctcctccagtttctggaggctcatggccat i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1358454 256 + 1464242 CATTCTTCTTCAAACTCTTCCTTGAGTATTTGC--CCCACACTGTCTCATTTTACCACCCACCTTTCTGGCtgtgtgaatttcctgtgaatgcc-ttaaaaaagggccacatgctcagtggctt----------------tactccatcagctccggaggtcatagatccaaatgagacttttggcagcaaggcccagggacagggctggttgtgcctggagacccc-agaggccctgctcctggcctcctgcagtttctggaggcTCATGGCCAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1083196 256 + 81552678 CTCTCTTCTCCAAACTCTTCCTTGAGTATTTGC--CCCACACTGTCTTGTTTGACCACCCACCTTTCTGGCCgtgtgaatttcctatgaatgcc-ttaacgaagggccacatgcttagtggctt----------------tactccatcagctccggaggtcatggatccaaatgagacttttggcagcaaggcccagggacagggctggttctgcctggaggcccc-agaggccctgctcctggcctcctccagtttctggaggctcatggccac i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1414252 256 + 108979918 CTCTCTTCTCCAAACTCTTCCTTGAGTATTTGC--CCCACACTGTCTCGTTTTACCACCCACCTTTCTGGCTGTGTGAATTTCCTGTGAATGCC-TTAACAGAGGGCCACACGCTTAGTGACTT----------------TCCTCCATCAGCTCCGGAGGTCACAGATCCAAACGAGCCTTTTGGCAGCAAGGCCCAGGGACAGAGCGGGTTCTGCCTGGAGGCCCC-AGAGGCCCTGCTCCTGGCCTCCTCCAGTTGCTGGAGGCTCATGGCCAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1386632 256 - 111193037 CTCTCTTCTCCAAACTCTTCCTTGAGTATTTGC--CCCACACTGTCTCGTTTTACCACCCACCTTTCTGGCTGTGTGAATTTCCTGTGAATGCC-TTAACAGAGGGCCACACGCTTAGTGACTT----------------TCCTCCATCAGCTCCGGAGGTCACAGATCCAAACGAGCCTTTTGGCAGCAAGGCCCAGGGACAGAGCGGGTTCTGCCTGGAGGCCCC-AGAGGCCCTGCTCCTGGCCTCCTCCAGTTGCTGGAGGCTCATGGCCAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1415105 256 + 3644372 CTCTCTTCTCCAAACTCTTCCTTGAGTATTTGC--CCCACACTGTCTCGTTTTACCACCCACCTTTCTGGCTGTGTGAATTTCCTGTGAATGCC-TTAACAGAGGGCCACACGCTTAGTGACTT----------------TCCTCCATCAGCTCCGGAGGTCACAGATCCAAACGAGCCTTTTGGCAGCAAGGCCCAGGGACAGAGCGGGTTCTGCCTGGAGGCCCC-AGAGGCCCTGCTCCTGGCCTCCTCCAGTTGCTGGAGGCTCATGGCCAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1368661 255 - 10304083 CTCTCTTCTCCGAACTCTTCCTTGAGTATTTGC--CCCACACTGTCTCGTTTTACCACCCACCTTTCTAGCTGTGTGAATTTCCTGTGAATGCC-TTAACAGAGGGCCACACGCTTAGTGACTT----------------TCCTCCATCAGCTCCGGAGGTCACAGATCCAAATGAGCC-TTTGGCAGCAAGGCCCAGGGACAGAGCTGGTTCTGCCTGGAGGCCCC-AGAGGCCCTGCTCCTGACCTCCTCCCGTTGCTGGAGGCTCATGGCCAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1443823 255 - 107702431 CTCTCTTCTCCGAACTCTTCCTTGAGTATTTGC--CCCACACTATCTCGTTTTACCACCCACCTTTCTGGCTGTGTGAATTTCCTGTGAATGCC-TTAACGGAGGGCCACACACTTAGTGACTT----------------TCCTCCATCAGCTCCGGAGGTCACAGAACCAAATGAGCC-TTTGGCAGCAAGGCCCAGGGACAGAGCTGGTTCTGCCTGGAGGCCCC-AGAGGCCCTGCTCCTGGCCTCCTCCAGTTGCTGGAGGCTCATGGCCAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 922276 255 - 2200435 CTCTCTTCTCCGAACTCTTCCTTGAGTATTTGC--CCCACACTGTCTCGTTTTACCACCCACCTTTCTAGCTGTGTGAATTTCCTGTGAATGCC-TTAACAGAGGGCCACACGCTTAGTGACTT----------------TCCTCCATCAGCTCCGGAGGTCACAGATCCAAATGAGCC-TTTGGCAGCAAGGCCCAGGGACAGAGCTGGTTCTGCCTGGAGGCCCC-AGAGGCCCTGCTCCTGACCTCCTCCAGTTGCTGGAGGCTCATGGCCAC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1360554 273 - 108792865 CTCTCTTCTCCAAACTCTCCCTTGAGGATTTGCACCACACGCTG-AGTATTTTGCCGCACACCTGTCTGACtgtgtgaatttcctgtgagtgcc-ttagcaaaggaccatgcatgtagtggctttaaacaacgc-aaatctactccatgggctctggaggtcacagatccaaatgagcccattagcagcaaagccagggggcagggctggctttgcctggaggccccgggagaccctgctcctggcctcctgcagtttctggaggcTCACAGCCAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1210005 275 - 7082604 CTCTCTTCTCCAAACTGTCCCTTGAGTATTTGCACCACACACCGTCTTATTTTGCCACACACCTGTCTGACtgtgtgaatttcctgtgaatgcc-ttaacaaatgaccgcatgcttagtgtctttaaacaacacaaaatttactccatcggctctggaggtcgcagatccaaatgagcccgtttgcagcaaggccaagggacagggctggctttgcctggaggccccgggagcccctgctcctggcctcctccagtttctggaggctcacagccac i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1297851 273 + 1864846 CTCTCTTCTCCAAACTCTCCCTTGAGTATTTGCAACACACACTGCCTTATTTTGCCACACACCTGTCTGACtgtgtgaaattcccgtgaatgcc-ttaacaaatgaccacacgcttagtgactttaaacaacac-aagtttaccccatcggctctggaggtcacagatccaaatgcacccgttttcagcaaggccaagggacagggctggctttgcctggaggccctgggagaccctgct-gtggcctcctccggtttctggaggctcacagccac i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 90685 259 + 287728 CTCTCTTCTCCACACTCTACCTTGAGTGTTTGCACCACACACTG----------------TCCTGTCTGACTGTGGGaatttcccgtgaatgcctttaacaaataaccacaagcttagtggctttaaacaacac-aaatttactccacgggctctggaggtcacagatccaaatgagcccgtttgcagcaaggccaagggacagggctggctttgcccggaggccccgggagaccctgctcctggcctcctccagtttctggaggctcacagccac i aotNan1.NW_018513311v1 I 34 C 0 e mm10.chr12 89990502 5685 - 120129022 I e otoGar3.GL873658 925551 3840 + 5252280 I e dasNov3.JH576208 1673210 5336 + 4416731 I e colAng1.NW_012118821v1 1351558 7155 - 13651311 M a score=351407.000000 s hg38.chr2_KI270774v1_alt 94939 45 + 223625 ggccctccagtctcagtttccatcatcacttccccctttctcccc- s panTro5.chr2A 110121668 45 - 111504155 ggccctccagtctcagtttccaacatcacttccccctttctcccc- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1332882 45 + 114371477 ggccctccagtctcagtttccatcatcacttccccctttctcccc- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1358710 45 + 1464242 GGCCctccagtctcagtctccatcatcacttccccctttctcccc- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1083452 45 + 81552678 ggccctccaatctcagtttccatcatcacttcctcctttcttccc- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1414508 45 + 108979918 GGCCctccaatcccggctcccatcatcacttcccccttcctcccc- i rheMac8.chr13 C 0 I 2 s macFas5.chr13 1386888 45 - 111193037 GGCCctccaatcccggctttcatcatcacttcccccttcctcccc- i macFas5.chr13 C 0 I 2 s macNem1.NW_012011978v1 1415361 45 + 3644372 GGCCctccaatcccggcttccatcatcacttcccccttcctcccc- i macNem1.NW_012011978v1 C 0 I 2 s cerAty1.NW_012000820v1 1368916 45 - 10304083 CGCCctccaatctcggcttccatcatcacttcccgcttcctcccc- i cerAty1.NW_012000820v1 C 0 I 2 s chlSab2.chr14 1444078 45 - 107702431 AGCCCTCCAATCTCGGCTTCCATCATCACTTCCCCCTTCCTCCCC- i chlSab2.chr14 C 0 I 130 s manLeu1.NW_012103754v1 922531 45 - 2200435 TGCCctccaatctcggcttccatcatcacttcccccttcctcccc- i manLeu1.NW_012103754v1 C 0 I 2 s colAng1.NW_012118821v1 1358714 45 - 13651311 GGCCctccaatctcagcttccatcatcacttccctctttccccgc- i colAng1.NW_012118821v1 M 7155 I 2 s calJac3.chr14 1360827 44 - 108792865 GCCCCTGGAA--tcggcttccatcatcgcttcccccttcctccccc i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1210280 44 - 7082604 gcccctgaaatctcggcttccatcctcactttccc--ttcctcccc i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1298124 45 + 1864846 gcccctggaatctcggtttctgtactcacctccccc-ttcctcccc i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 90944 46 + 287728 gcccctggaatctcggcttccatcatcacttcccccttcctccccc i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89990502 5685 - 120129022 I e otoGar3.GL873658 925551 3840 + 5252280 I e dasNov3.JH576208 1673210 5336 + 4416731 I a score=-7744.000000 s hg38.chr2_KI270774v1_alt 94984 1 + 223625 -t s panTro5.chr2A 110121713 1 - 111504155 -t i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1332927 1 + 114371477 -t i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1358755 1 + 1464242 -t i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1083497 1 + 81552678 -t i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1360871 1 - 108792865 a- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1210324 1 - 7082604 a- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1298169 1 + 1864846 a- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 90990 1 + 287728 a- i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89990502 5685 - 120129022 I e otoGar3.GL873658 925551 3840 + 5252280 I e dasNov3.JH576208 1673210 5336 + 4416731 I e colAng1.NW_012118821v1 1358759 2 - 13651311 I e manLeu1.NW_012103754v1 922576 2 - 2200435 I e chlSab2.chr14 1444123 130 - 107702431 I e cerAty1.NW_012000820v1 1368961 2 - 10304083 I e macNem1.NW_012011978v1 1415406 2 + 3644372 I e macFas5.chr13 1386933 2 - 111193037 I e rheMac8.chr13 1414553 2 + 108979918 I a score=146860.000000 s hg38.chr2_KI270774v1_alt 94985 14 + 223625 cagactttcccacc s panTro5.chr2A 110121714 14 - 111504155 cagactttcccacc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1332928 14 + 114371477 cagactttcccacc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1358756 14 + 1464242 cagactttcccacc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1083498 14 + 81552678 cagactttcccacc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1414555 14 + 108979918 cagactttcccacc i rheMac8.chr13 I 2 C 0 s macFas5.chr13 1386935 14 - 111193037 cagactttcccacc i macFas5.chr13 I 2 C 0 s macNem1.NW_012011978v1 1415408 14 + 3644372 cagactttcccacc i macNem1.NW_012011978v1 I 2 C 0 s cerAty1.NW_012000820v1 1368963 14 - 10304083 cagactttcccgcc i cerAty1.NW_012000820v1 I 2 C 0 s chlSab2.chr14 1444253 14 - 107702431 cagacttttccacc i chlSab2.chr14 I 130 C 0 s manLeu1.NW_012103754v1 922578 14 - 2200435 cagactttcccacc i manLeu1.NW_012103754v1 I 2 C 0 s colAng1.NW_012118821v1 1358761 14 - 13651311 cagactttcccacc i colAng1.NW_012118821v1 I 2 C 0 s calJac3.chr14 1360872 14 - 108792865 cgggctttcccacc i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1210325 14 - 7082604 caggctttcccacc i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1298170 14 + 1864846 caggctttcccacc i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 90991 14 + 287728 caggctttgccacc i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89990502 5685 - 120129022 I e otoGar3.GL873658 925551 3840 + 5252280 I e dasNov3.JH576208 1673210 5336 + 4416731 I a score=6449387.000000 s hg38.chr2_KI270774v1_alt 94999 749 + 223625 tttgtcttgtaaggagctgtgtgctaacactaaggccagtggataatccaggctaatctcccctcctcaaaa-tcttaactgaatcccatctgcaaagccccttttgccatgcaggttg-cagtcacaggctgggg-----GACTGTGT-CC---------------------CC--TAGACGCTGGTGCTCTGA-----------G----CTACTCTTGAGGTCTTTTCCATCC--ACATTCTCCCAAGAAGAATCCCATTCACTCACAGTCCACTACTGTA-TCCCCCCTCAGGACTCCCAAATGTGTCTTTTTAAG-CTGGACTTCACCCAACAGCTGAAA-GTACATTTCCAAATGCCCAAGAGCTCACTGCCCGCCTGTGCCACGGGCACCTCCAACACAA-TTCCAAGCCTGAGTCTGCTGCTCCTT------TGCTTGTCACAGCCAGTCTCCTTTCTTCTCTGGCCTTCCTAGGGCCAGTACATGAGATTTTCACTTGCTTAGGC-ATCAAACCAAGGATGGCTGAATCCTCAGAGGCTC--TGTGCTTTTCTTCTGTTCCCAACAGTAACTCATCATTGAGCCATG-GAATCCTCTTTAATGAGCCACCGAGTCTGGTCCTTCCTCTCTATC-CAAACCCCACCCTCCTAGTGACCATTCTCAG-GGTGCGTGGGGGGATTA----TATCACTGTTGGCTGATCTCCTCCCTGCTCTTCAGAGCTTGTCTAACTCATTTGTTATCTT-CACCCATTTGAGGGGTGAGTGATGAGGATTGAGGGGAGAATG-------TTAAAGGCAAATCATCACA s panTro5.chr2A 110121728 749 - 111504155 tttgtcttgtaaggagctgtgtgctaacactaaggccagtggataatccaggctaatctcccctcctcaaaa-tcttaactgaatcccatctgcaaagccccttttgccatgcaggttg-cagtcacaggctgggg-----GACTGCGT-CC---------------------CC--TAGACGCTGGTGCTCTGA-----------G----CTACTCTTGAGGTCTTTTCCATCC--ACATTCTCCCAAGAAGAATCCCATTCACTCACAGTCCACTACTGTA-TACCCCCTCAGGACTCCCAAATGTGTCTTTTTAAG-CTGGACTTCACCCAACAGCTGAAA-GTACATTTCCAAATGCCCAAGAGCTCACTGCCCGCCTGTGCCACGGGCACCTCCAACACAA-TTCCAAGCCTGAGCCTGCTGTTCCTT------TGCTTTTCACAGCCAGTCTCCTTTCTTCTCTGGCCTTCCTAGGGCCAGTACATGAGATTTTCACTTGCTTAGGC-ATCAAACCGAGGATAGCTGAATCCTCAGAGGCTC--TGTGCTTTTCTTCTGTTCCCAACAGTAACTCATCATTGAGCCATG-GAATCCTCTTTAATGAGCCACCGAGTCTGGTCCTTCCTCTCTATC-CAAACCCCACCCTCCTAGTGACCATTCTCAG-GGTGCGTGGAGGGATTA----TATCACTGTTGGCTGATCTCCTCCCTGCTCTTCAGAGCTTGTCTAACTCATTTGTTATCTT-CACCCATTTGATGGGTGAGTGATGAGGACTGAGGGGAGAATG-------TTAAAGGCAAATCATCACA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1332942 749 + 114371477 tttgtcttgtaaggagctgtgtgctaacactaaggccagtggataatccaggctaatctcccctcctcaaaa-tcttaactgaatcccatctgcaaagccccttttgccatgcaggttg-cagtcacaggctgggg-----gACTGCGT-CC---------------------CC--TAGACGCTGGTGCTCTGA-----------G----CTACTCTTGAGGTCTTTTCCATCC--ACATTCTCCCAAGAAGAATCCCATTCACTCACAGTCCACTACTGTA-TCCCCCCTCAGGACTCCCAAATGTGTCTTTTTAAG-CTGGACTTCACCCAACAGCTGAAA-GTACATTTCCAAATGCCCAAGAGCTCACTGCCCGCCTGTGCCACGGGCACCTCCAACACAA-TTCCAAGCCTGAGCCTGCTGTTCCTT------TGCTTTTCACAGCCAGTCTCCTTTCTTCTCTGGCCTTCCTAGGGCCAGTACATGAGATTTTCACTTGCTTAGGC-ATCAAACCGAGGATAGCTGAATCCTCAGAGGCTC--TGTGCTTTTCTTCTGTTCCCAACAGTAACTCATCATTGAGCCATG-GAATCCTCTTTAATGAGCCACCGAGTCTGGTCCTTCCTCTCTATC-CAAACCCCACCCTCCTAGTGACCATTCTCAG-GGTGCGTGGAGGGATTA----TATCACTGTTGGCTGATCTCCTCCCTGCTCTTCAGAGCTTGTCTAACTCATTTGTTATCTT-CACCCATTTGATGGGTGAGTGATGAGGATTGAGGGGAGAATG-------TTAAAGGCAAATCATCACA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1358770 750 + 1464242 tttgtcttgtaaggagctgtgtgctaacactaaggccagtggataatccaggctaatctcccctcctcaaaa-tcttaactgaatcccatctgcaaagccccttttgtcatgcaggttg-cagtcacaggctgggg-----GACTGCGT-CC---------------------CC--TAGACGCTGGTGCTCTGA-----------G----CTACTCTTGAGGTCTTTTCCATCC--ACATTCTCCCAAGAAGAATCCCATTCACTCACAGTCCACTACTGTATTCCCCCCTCAGGACTCCCAAATGTGTCTTTTTAAG-CTGGACTTCACCCAACAGCTGAAA-GTACATTTCCAAATGCCCAAGAGCTCACTGCCCACCTGTGCCACGGGCACCTCCAACACAA-TTCCAAGCCTGAGCCTGCTGCTCCTT------TGCTTTTCACAGCCAGTCACCTTTCTTCTCTGGCCTTCCTAGGGCCAGTACATGAGATTTTCACTTGCTTAGGC-ATCAAACGGAGGATGGCTGAATCCTCAGAGGCTC--TGTGCTTTTCTTCTGTTCCCAACAGTAACTCATCATTGAGCCATG-GAATCCTCTTTAATGAGCTACCGAGTCTGGTCCTTCCTCTCTATC-CAAACCCCACCCTCCTAGTGACCATTCTCAG-GGTGCGTGGAGGGATTA----TATCACTGTTGGCTGATCTCCTCCCTGCTCTTCAGAGCTTGTCTAACTCATTTGTTATCTT-CATCCATTTGATGGGTGAATGATGAGGATTGAAGGGAGAATG-------TTAAAGGCAAATCATCACA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1083512 756 + 81552678 tttgtcttgtaaggagctgtgtgctaacac-aagaccagtgtataatccaggctaatctcccctcctcaaaa-tcttaactgaattccatctgcaaagccccttttgccatgcaggttg-cagtcacaggctgggg-----GACTGCGTCCC---------------------CC--TAGACACTGGTGCTCTGA-----------G----CTACTCTTGAGGTCTTTTCCATCC--ACATTCTCCCAAGAAGAATCCCATTCACTCACAGTCCACTACTGTA-TCCCCCCTCAGGACTCCCAAATGTGTCTCTTTAAG-CTGGACTTCACCCAACAGCTGAAA-GTACATTTCCAAATGCCCAAGAGCTCACTGCCCGCCTGTGCCATGGGCACCTCCAACACAA-TTCCAAGCCTAAGCCTGCTGCCACTT------TGCTTTTCACAGCCAGTCTCCTTTCTTCTCTGGCCTTCCTAGGGCCAGTACATGAGATTTTCACTTGCTTAGGC-ATCAAACCGAGGACGGTTGAATCCTCAGAGGCTC--TGTGCTTTTCTTCTGTTCCCAACAATAACTCATCATTGAGCCATG-GAATCCTCTTTAATGAGCCACCAAGTCTGGTCCTTCCTCTCTATC-CAAACCCCACCCTCCTAGTGACCATTCTCAG-GGTGCATGGAGGGATTG----TATCACTGTTGTCTGATCTCCTCCCTGCTCTTCAGAGCTTGTCTAACTCATTTGTTATCTT-CACCCATTTGATGGGTGCGTGATGATGATTGAGGGGAGAATGTTATCTTTTAAAGGCAAATCATCACA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1414569 746 + 108979918 tttgtcttgtagggagctgtgtgctaacactaagaccagtggataatccaggttgatctctccaccccaaaa-tctttactgaatcccatctgcaaagccccttttgccatgcagggtt-cagtcacaggctcggg-----gactGCAT-CC-----------------------------CGCTAGTGCTCTGA-----------G----CTACTCTTGACGtcttttccatcc--atgttctcccaagaagaatcccattcactcacagtccac-actgta-t-ccccctcaggactcccaaatgtgtctctttaag-ctggactctacccaatggttgaaa-gtacatttccaaatgcccaagagctcactgcctgcctgtgccatggacacctccaacacaa-ttccaagcctgagcctgctgccgctt------tgctattcatagccagtctgccttcttctctggccttcctaggatcagtacatgagattttcacttgctcaggc-atcaaaccGAGAATAGCTGAATCTTCAGATTTTCTCTGTGCTTTTCTTCTGTTCCCAACAATAACTCGTCATTGAGCCATG-GAATCCTCCTTAATGAGCCACCAAGTCTGGTCCTTCCTGTCTGTC-CAAACCCCGCCCTCCTAGTGACCATGCTCAG-GGTACAT-GAGGGATTA----TATCACTGTTGACTGAT---CTCCCTGTTCTTCAGAGCTTGTCTGACTCATTTGTTATCTT-CACCCATTTGATGGGTGTGTGATGGTGATTGAGGGGAGAATGTTATCTTTTAAAGGCAAATCATCACA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1386949 747 - 111193037 tttgtcttgtagggagctgtgtgctaacactaagaccagtggataatccaggttgatctctccaccccaaaa-tctttactgaatcccatctgcaaagccccttttgccatgcagggtt-cagtcacaggctcggg-----gactGCAT-CC-----------------------------CGCTAGTGCTCTGA-----------G----CTACTCTTGACGTCTTTTCCATCC--ATGTTCTCCCAAGAAGAATCCCATTCACTCACAGTCCAC-ACTGTA-T-CCCCCTCAGGACTCCCAAATGTGTCTCTTTAAG-CTGGACTCTACCCAATGGTTGAAA-GTACATTTCCAAATGCCCAAGAGCTCACTGCCTGCCTGTGCCATGGACACCTCCAACACAA-TTCCAAGCCTGAGCCTGCTGCCGCTT------TGCTATTCATAGCCAGTCTGCCTTCTTCTCTGGCCTTCCTAGGATCAGTACATGAGATTTTCACTTGCTCAGGC-ATCAAACCGAGAATAGCTGAATCTTCAGATTTTCTCTGTGCTTTTCTTCTGTTCCCAACAATAACTCGTCATTGAGCCATG-GAATCCTCCTTAATGAGCCACCAAGTCTGGTCCTTCCTCTCTGTC-CAAACCCCGCCCTCCTAGTGACCATGCTCAG-GGTACATGGAGGGATTA----TATCACTGTTGACTGAT---CTCCCTGTTCTTCAGAGCTTGTCTGACTCATTTGTTATCTT-CACCCATTTGATGGGTGTGTGATGATGATTGAGGGGAGAATGTTATCTTTTAAAGGCAAATCATCACA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1415422 747 + 3644372 tttgtcttgtagggagctgtgtgctaacactaagaccagtggataatccaggttgatctctccaccccaaaa-tctttactgaatcccatctgcaaagccccttttgccatgcagggtt-cagtcacaggctcgga-----gactGCAT-CC-----------------------------CGCTAGTGCTCTGA-----------G----CTACTCTTGACGtcttttccatcc--atgttctcccaagaagaatcccattcactcacagtccac-actgta-t-ccccctcaggactcccaaatgtgtctctttaag-ctggactctacccaatggttgaaa-gtacatttccaaatgcccaagagctcactgcctgcctgtgccatggacacctccaacacaa-ttccaagcctgagcctgctgccgctt------tgctattcatagccagtctgccttcttctctggccttcctaggatcagtacatgagattttcacttgctcaggc-atcaaaccGAGAATAGCTGAATCTTCAGATTTTCTCTGTGCTTTTCTTCTGTTCCCAACAATAACTCATCATTGAGCCATG-GAATCCTCCTTAATGAGCCACCAAGTCTGGTCCTTCCTCTCTGTC-CAAACCCCGCCCTCCTAGTGACCATGCTCAG-GGTACATGGAGGGATTA----TATCACTGTTGACTGAT---CTCCCTGTTCTTCAGAGCTTGTCTGACTCATTTGTTATCTT-CACCCATTTGATGGGTGTGTGATGATGATTGAGGGGAGAATGTTATCTTTTAAAGGCAAATCATCACA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1368977 741 - 10304083 tttgtcttgcagggagctgtgtgctaacacgaagaccagtggataatccaggttaacctccccacctcaaaa-tctgtactgaatcccatctgcaaagccccttttgccatgcagggtg-cagtcacaggctgggg-----GACTGCAT-CC-----------------------------CGCTAGTGCTCTGA-----------G----CTACTCTTGACGTCTTTTCCATCC--ATGTTCTCCCAAGAAGAATCCCATTCACTCACAGTCCAC-ACTGTA-T-CCCCCTCTGGACTCCCAAATGTGTCTCTTTAAG-CTGGACTCCACCCAATGGCTGAAA-GAACATTTCCAAATGCCCAAGAGCTCACTGCCCGCCTGTGCCATGGACACCTCCAACACAA-TTCCAAGCCTGAGCCTGCTCCCACTT------TGCTTTTCATAGCCAGTCTGCCTTCTTCTCTGGCCTTCCTAGGATCAGTACATGAGATTTTCACTTGCTCAGGC-ATCAAACCAAGAATGGCTGAATCTTCAGAGGCTC----TGCTTTTCTTCTGTTCCCAACAATAACTCGTCATTGAGCCATG-GAATCCTCCTTAACGAGCCACCAAGTCTGGTCCTTCCTCTCTGTC-CAAACCCCACCCTCCTAGTGACCATGCTCAG-GGTGCATGGAGGGATTA----TATCACTGTTGACTGAT---CTCCCTGCTCTTCAGAGCTTGTCTAACTCATTTGTTATCTT-CACCCATTTTATGGGTGCGTGATGGTGATTGAGGGGAGAATGT--TCTTTTAAAGGCAAATCATCACA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1444267 741 - 107702431 tttgtcttgtagggagctgtgtgctaacacgaagaccagtggataatccaggttaacctccccacctcaaaa-tctttactgaatcccatctgcaaagccccttttgccacgcagggtg-cagtcacaggctcggg-----gactGCAT-CC-----------------------------CGCTAGTGCTCTGA-----------G----CTACTCTTGACGTCTTTTCCATCC--ATGTTCTCCCAAGAAGAACCCCATTCACTCTCAGTCCAC-ACTGTA-T-CCCCCTCAGGACTCCCAAATGTGTCTCTTTAAG-CTGGACTCCACCCAATGGCTGAAA-GAACATTTCCAAATGCCCAAGAGCTCACTGCCCGCCTGTGCCATGGACACCTCCAACACAA-TTCCAAGCCTGAGCCTGCTCCCACTT------TGCTTTTCATAGCCAGTCTGCCTTCTTCTCTGGCCTTCCTAGGATCAGTACATGAGATTTTCACTTGCTCAGGC-ATCAAACCAAGAATGGCTGAATCTTCAGAGGCTC----TGCTTTTCTTCTGTTCCCAACAATAACTCGTCATTGAGCCATG-GAATCCTCCTTAACGAGCCACCAAGTCTGGTCCTTCCTCTCTGTC-CAAACCCCACCCTCCTAGTGACCATGCTCAG-GGTGCATGGAGGGATTA----TATCACTGTTGACTGAT---CTCCCTGCTCTTCAGAGCTTGCCTAACTCATTTGTTATCTT-TACCCATTTTATGGGTGTGTGATGGTGATTGAGGGGAGAATGT--TCTTTTAAAGGCAAATCATCACA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 922592 740 - 2200435 tttgtcttgcagggagctgtgtgctaatacgaagaccagtggataatccaggttaacctccccacctcaaaa-tctgtactgaatcccatctgcaaagccccttttgccatgcagggtg-cagtcacaggctcggg-----gactGCAT-CC-----------------------------CGCTAGTGCTCTGA-----------G----CTACTCTTGACAT-TTTTCCGTCC--ATGTTCTCCGAGGAAGAATCCCATTCACTCACAGTCCAC-ACTGTA-T-CCCCCTCTGGACTCCCAAATGTGTCCCTTTAAG-CTGGACTCCACCCAATGACTGAAA-GAACATTTCCAAATGCCCAAGAGCTCACTGCCCGCCTGTGCCATGGACACCTCCAACACAA-TTCCAAGCCTGAGCCTGCTCCCACTT------TGCTTTTCATAGCCAGTCTGCCTTCTTCTCTGGCCTTCCTAGGATCAGTACATGAGATTTTCACTTGCTCAGGC-ATCAAACCAAGAATGGCTGAATCTTCAGAGGCTC----TGCTTTTCTTCTGTTCCCAACAATAACTCGTCATTGAGCCATG-GAATCCTCCTTAACGAGCCACCAAGTCTGGTCCTTCCTCTCTGTC-CAAACCCCACCCTCCTAGTGACCATGCTCAG-GGTGCGTGGAGGGATTA----TATCACTGTTGACTGAT---CTCCCTGCTCTTCAGAGCTTGTCTAAGTCATTTGTTATCTT-CACCCATTTTATGGGTGCGTGATGGTGTCTGAGGGGAGAATGT--TCTTTTAAAGGCAAATCATCACA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1358775 740 - 13651311 tttgtcttgtagggagctgtgcactaacacgaagaccagtggataatccaggttaatctccccacctcaaaa-tctttactgaatcccatccgcaaagccccttttgccatgca-ggtg-cagtcacaggctcggg-----gactGCAT-CC-----------------------------CGCCAGTGCTCTGA-----------G----CTACTCTTGACGTCTTTTCCATCG--ACGTTCTCCCAAGAAGAATCCCATTCACT--CAGTCCAC-ACTGTA-T-CCCCCTCAGGACTCTCAAATGTGTCTCTGTAAG-CTGGACTCCACCCAATGGCTGAAA-GTACATTTCCAAATGCCCAAGAGCTCACTGCCCGCCTGTGCTATGAACACCTCCAACACAA-TTCCAAGCCTGAGCCTGCTGCCGCTT------TGCTTTTCGTAGCCAGTCTGCCTTCTTCTCTGGCCTTCCTAGAGTCAGTACATGAGATTTTCACTTGCTCAAGC-ATCAAACCAAGAATGGCTGAATCTTCAGAGGCTC----TGCTTTTCTTCTGTTCCCAACAATAACTCATCATTGAGCCACG-GAATCCTCCTTACTGAGCCACCAAGTCTGGTCCTTCCTCTCTGTC-CAAACCCCACCCTCCTAGTGACCATGCTCAG-GGTGCATGAAGGGATTA----TATCACTGTTGACTGAT---CTCCCTGCTCTTCAGAGCTTGTCTAACTCATTTGTTATCTC-CACCCATTTGATGGGTACGTGATGATGATTAAGGGGAGAATGTTATCTTTTAAAGGCAGATCATCACG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1360886 715 - 108792865 tgtgtcttgtaaggagccatgtgctaacactgaggccagcagataatccaggttaatctccccacctctgaattcttacctgaatcctatccgcaaagcctcttttgccaagcagggcg-cagtcacgggctccgg-----ggCTGCAT-CC---------------------CCCTTAGACGCTGCTGCTCTGA-----------GCACGCCACTCGTAGAGTCTTTTCCATCC--ACTTTCTCCCACGAAGAACCCCATTCACTCACATTCCGCCGCCGCA-TCCCCACTCAGGACTCCCAAATGTGTCTCTTGAAG-TTGGACTCCACCCAACGGCTGAAA-GTGCATTTCCAAAAGCCCAGGGGCTCACTGCCCACCTGTGCCACGGA-ACCTCCAGCACAAGGTCCAAGCCTGAGCCTGCCG---CTC------CGCTTTCCATAACCAGCCTCC---CCTCTCTGCCCTTCCTAGG-TCAGTGCCTGAGATTATCACTTGCTCAGGC-ATCAAACCGAAGATGGCTGAGTCCTCAGAGGCTC--TGTGCTTTTCTCCTGTTCCCAATCATAACTTGCCA-TGAGCCATG-GAATTCTCC-TAATGAGCCTCCAACTGTTGTCCGTGTTCTGTATC-CAAACCCCACCCTGCTAGGGACCAGTCTCG--GGCCTGTGGAGGGATAA----T-TCACTGTTGACTGATCCCCTCCCGGCTCTTCAGATCTTGAATAACTCATTTGCTACCTT-CCC----------------------------AGGGAA---------CGTTTAAAGGCAAACCATGATA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1210339 705 - 7082604 tgtgtcttgtaaggagccgtgtgctaacactgaggccagtggataatccaggtcagtctactcacctccgaattcttacctgaatcccatccgcaaagccccatttgccaagcagggca-cagccgcaggctccgg-----ggCCGAAT-CC---------------------CCCTTGG-------TGCTCTGA-----------GCACGCTACTTG-AGAGTCTTTTCCACCC--ACCTTCTCCCACGAAGAATCCCGTTCACCCACATTCTGCCGCCGTA-TCCCCACTCAGGACTCCCAAATGTGTGTCTTTAAG-CGGGACTCCACCCAACGGCTGAAA-GTACATTTCCAAAA-CCCAGGGGCTCACTGCCCACCTGTGCCACAGA-ACGTCCAACGCGAGGTCCGAGCC-GAGCCTGCCG---CTC------CGCTTTCCATAACCAGCCTCC---CTTCTCTGCCCTTCCTAGG-TCAGGACGTGCGATTAGCACTCGCTCAGGC-ATCAAATCGAGGGTGGCTGAGTCCTCAGAGGCTC--TGTGCTGTTCTCCTTTTCCCAATAATAACTCGCCG-TGAGCCCTG-GAATTCTCC-TCATGAGCCTCCGAGCGCTGTCTGAGCTCTCTATC-CAAACCCCACCGTCCTAGGGACCAGTCTCA--GGCCTGTGGAGGGATAA----T-TCACTGCTGACGGATCCCCTCTGGGCTCTGTGGATCTTGAATAACTGATTTGTTACCTT-CCC----------------------------AGGGAA---------CTTTTAAAGGCAAATCATCATA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1298184 712 + 1864846 tgtgtcttgtaaggagccgtgtgctaacactgaggccagtggataatccaggtcaatctacccacctccgaattcttacctgaatcccatctgcaaagccccgtttgccaagcagggca-cagccacaggctccgg-----ggCTGCAT-CC---------------------CCCTTGGACGCTGGTGCTCTGA-----------GCACACTACTCT-AGAGTCTTTTCCACCC--ACATTCTCTCACGAAGAATCCCATTCACTCACATTCCGCTGCCGTT-TCCCCACTCAGGGCTCCCAAATGTGTCTCTTTAAG-CTGGACTCCACCCAACGGCTGAAA-GTACATTTCCAAAAGCCCAGGGGCTCACTGCCCACCTGTGCCACGGA-ACCTCCAACACAAGGTCCAAGCCTGAGCCTGCTG---CTC------TGCTTTCCATAGCCAGCCTCC---CTTCTCTGCCCTTCCTAGG-TCAGTACGTGAGATTAGCACTCGCTCAGGC-ATCAAACCAAGGATGGCCGAGTCCTCAGAGGCTC--TCTGCTGTTCTCCTGTTCCCAATAACAGCCCGCCA-TGAGCCCTG-GAATTCTCC-TAATGAGCCTCCAAGTGCTGTCCATGCTCTCTATC-CAAACCCCACCCTCCTAGGGACCAGTCTCA--GGCCTGTGGA-GGATAA----T-TCACTGCTGACTGA-CCCCTCCAGGCTCTTTGGATCTTGAATAACTCATTCGTTACCTT-CCC----------------------------AGGGAA---------CTTTTAAAGACCAATCATCATA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 91005 715 + 287728 tgtgtcttgtaaggagccatgtgctaacattgaggccagtggataatccaggttaatcttcccacctccgaattcttacctgaatcccatccgcagagccccttttgccaagcagggtg-cagtcacaggctccgg-----ggCTGCAT-CC---------------------CTCTTAGACGCTGGTGCTCTGA-----------GCACGCTACTCTTAGAGTCTTTTCCATCC--ACATTCTCCCACGAAGAATCCCATTCACTCACATTCCGCCTCCGTA-TCCCCACTCAGGACTCCCAAATGTGTCTCTTTAAG-CTGAACTCCACCCAACGGCTGAAA-GTACATTTCCAAAAGCCCAGGGGCTCCCTGCCCGCCTGTGCCACAGA-ACCTCCAACAAAAGGTGCAAGCCTGAGCCTGCCG---CTC------CGCCTTCCATAACCAGCCTCC---CTTCTCTGCCCTTCCTAGG-TCAGTACATGTGATTATCACTTGCTCAGGC-ATCAAACCCAGGATGGCTGAGGCCTCAGAGGCTC--TGTGCTCTTCTCCTCATCCCAATAATAACTCGCCA-TGAGCCATG-GAATTCTCC-TAATGAGCCTCCAAGTGTTGTCCGTGCTCCATGTC-CACACCCCACCCTCCTAGGGACCAGTCTCA--GGCCTGTGGAGGGATAA----T-TCACTGTTGACTGGCCCCCTCCAGGCTCTTCGGATCTTGAATAACTCATTCGTTACCTT-CCC----------------------------AGGGAA---------CTTTTAAAGGCAAATCATCATA i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1678546 783 + 4416731 tttttcttataagaacacttatcattatattgggtccactgggaaatccagaataatttccccacctaaagatccttaacttactcacatgtgcaaagtcccttttgacatgtaaaatgacattcacaaattgcagCGTTTGCCAGCAT-CCTGGCTATGGTCTAGTGCAcgccctttagatattggtgtccttaagctttctactg----ctacccaccttgtcttttcaatcctagagtccttcactgaatgactctatttactcatattcagctactata-tctatgcggatgagcaccaaatacttttcttcaagaccatattctacccatagttccaaatgtgtatttacaaattcctactggctcactatctctatgtaccactagaatctcaaattcaatatccaaatatgaaataattacctctctatttgtgccttctatacctagtgtccct-cttcacgagctttcgcgaagtcagtaaatggtatcatcatgcacttaggctgtctaactaaagatggttgagccatctcagtctc--tatccttctcttttgttccccacaatatttaatcattagctcatattaattctttttaaagtaccaccaaatcttgtcctctctttctgtcaaaaatcttactgccatacttccaattctcagcattacggagatttataactcttataactcttgactgatttcccacctgttttttagatctctgctaactcatttattgtgttacattca-------------------------gaggga--------tctttctaatgctaatcatcata i dasNov3.JH576208 I 5336 C 0 e mm10.chr12 89990502 5685 - 120129022 I e otoGar3.GL873658 925551 3840 + 5252280 I a score=1604201.000000 s hg38.chr2_KI270774v1_alt 95748 174 + 223625 TTCTTGGGCTTCAGAACATCTTCTAACAA--AGAT-TAATGTTCTGAAGCCTTTGCATCGTGTTTTAGCATTTGGTTTCAAATTACCTAGAGGAAGCATCAGTCACATTT--------------GGAGAGG------GG-AAAGAAAAGGAGAAAG------ATGAAGATGATTTTCACAAACTAGAAACCCATAGGACTTCCG s panTro5.chr2A 110122477 175 - 111504155 TTCTTGGGCTTCAGAACATCTTCTAACAA--AGAT-TAATGTTCTGAAGTCTTTGCATCGTGTTTCAGCATTTAGTTTCCAATTACCTAGAGGAAGCATCAGTCACATTT--------------GGAGAGG------GGGAAAGAAAAGGAGAAAG------ATGAAGATGATTTTCACAAACTAGAAACCCATAGGACTTCCG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1333691 175 + 114371477 TTCTTGAGCTTCAGAACATCTTCTAACAA--AGAT-TAATGTTCTGAAGTCTTTGCATCGTGTTTCAGCATTTAGTTTCAAATTACCTAGAGGAAGCATCAGTCACATTT--------------GGAGAGG------GGGAAAGAAAAGGAGAAAG------ATGAAGATGATTTTCACAAACTAGAAACCCATAGGACTTCCG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1359520 177 + 1464242 TTCTTGGGCTTCAGAACATCTTCTAACAAACAGAT-TAATGTTCTGAAGTCTTTGCATCGTGTTTTAGCATTTAGTTTCAAATTACCTAGAGGAAGCATCAGTCACATTT--------------GGAGAGG------GGGAAAGAAAAGCAGAAAG------ATGAAGATGATTTTCACAAACTGGAAACCCATGGGACTTCCG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1084268 173 + 81552678 TTCTTGGGCTTCAGAACATCTTCTAACAA----AC-TAATGTTCTGAAGTCTTTGCATTATGTTTTAGCATTTAGTTTCAAATTACCAAGAGGAAGCATAAGTCACATTT--------------ggagagg------gggaaagagaaggagaaag------atgaagATGATTTTCACAAACTAGAAACCCACAGGACTTCCG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1415315 177 + 108979918 TTCTTAGGCTTCAGAAGATCTTCTAACAAACAGACTTAATATTTGGAAGCCTTTGCATCATGTTTTAGCATTTACTTTCAAATTACCTAGAGGAAGCATCAGTCACATTT--------------GGAGAGG------GGGAAAGAGAAG-AGAAAG------ATGAAGACGATTTTCACAAAGTAGACACCCAAAGGACTTCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1387696 177 - 111193037 TTCTTAGGCTTCAGAAGATCTTCTAACAAACAGACTTAATATTTGGAAGCCTTTGCATCATGTTTTAGCATTTACTTTCAAATTACCTAGAGGAAGCATCAGTCACATTT--------------GGAGAGG------GGGAAAGAGAAG-AGAAAG------ATGAAGACGATTTTCACAAAGTAGACACCCAAAGGACTTCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1416169 174 + 3644372 TTCTTAGGCTTCAGAAGA---TCTAACAAACAGACTTAATATTTGGAAGCCTTTGCATCATGTTTTAGCATTTACTTTCAAATTACCTAGAGGAAGCATCAGTCACATTT--------------GGAGAGG------GGGAAAGAGAAG-AGAAAG------ATGAAGACGATTTTCACAAAGTAGACACCCAAAGGACTTCTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1369718 176 - 10304083 TTCTTAGGGTTCAGAAGATCTTCTAACAAACAGAC-TAATATTTGGAAGCCTTTGCATCATGTTTTAGCATTTACTTTCAAATTACCTAGAGGAAGCATCAGTCACATTT--------------GGAGAGG------GGGAAAGAGAGG-AGAAAG------ATTAAGATGATTTTCACAAAGTAGAAACCCAAAGGACTTCCG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1445008 176 - 107702431 TTCTTAGGCTTCAGAAGATCTTCTAACAAACAGAC-TAATATTTGGAAGCCTTTGCATCATGTTTTAGCATTTACTTTCAAGTTACCTAGAGGAAGCATCAGTCACATTT--------------GGAGAGG------GGGAAAGAGAGG-AGAAAG------ATTAATATGATTTTCACAAAGTAGAAACTCAAAGGACTTCCG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 923332 176 - 2200435 TTCTTAGGGTTCAGAAGATCTTCTAACAAACAGAC-TAATATTTGGAAGCCTTTGCATCATGTTTTAGCATTTACTTTCAAATTACCTAGAGGAAGCATCAGTCACATTT--------------GGAGAGG------GGGAAAGAGAGG-AGAAAG------ATTAAGATGATTTTCACAAAGTAGAAACCCAAAGGACTTCCG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1359515 176 - 13651311 TTCTTAGGCTTTAGAAGATCTTCTAACAAACAGAC-TAATATTTGGAAGCCTTTGCATCATGTTTTAGCATTTACTTTCAAATTACCTAGAGGAAGCATCAGTCACATTT--------------GGAGAGG------GGGAAAGAGAGG-AGAAAG------ATGAAGATGATTTTCACAAAGTAGAAACCCAAAGGACTTCCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1361601 174 - 108792865 TTCTTGGGCCTCAGAACATCTTCTAACAAACAGAC-TAATATTCAGAAGTCTTTGCATCATGTTATAGAATTTAATTTCAAATTACATAAAGGAAGCATCAGTCACATCT--------------GGAGAGG------G--AAAAAGTGG-AGAAAG------ACGAAGATGATTTTCAGGAAGTATAAAGGAAAGGGACTTCCG i calJac3.chr14 C 0 I 1 s saiBol1.JH378218 1211044 160 - 7082604 TTCTTGTGCTTCAGAACA---TCTAACAAACAGAC-TAATATTCAAAAGTCTTTGCATCATGTTATAGAATTTAATTTCAAGTTACATAAAGGAAGCATCAGTCACATTT--------------GGAGA------------------GG-AGAAAG------ACGAAGATGGTTTTCA-CAAGGAGAAAGGGGGAGGGCTTCCG i saiBol1.JH378218 C 0 I 1 s cebCap1.NW_016107827v1 1298896 174 + 1864846 TTCTTGGGCCTCAGAACATCTTCTAGCAAACAGAC-TAATATTCAGAAGTCTTTGCCTCATGTTACAGAATTTAATTTCGAATTACATAAAGGAAGTATCAATCACATTT--------------GGAGAGG------G--AAAAAGAGG-AGAAAG------ACGAAGATGATTTTCACAAAGTAGAAAGGTAAAGGACTTCCG i cebCap1.NW_016107827v1 C 0 I 1 s aotNan1.NW_018513311v1 91720 146 + 287728 TTCTTGGGCCTCAGAACATCTTCTAACAAACAGAC-TGATATTCAGAGGTCTTTGCATCATGTTATAGAATTTAATTTCAAATTACATAAAGGAAGCATCAGTCACATTT--------------GGAGAGG------G--AAAAAGAGG-AG----------------------------------AAAGGGAAAGGACTTCCG i aotNan1.NW_018513311v1 C 0 I 164 s otoGar3.GL873658 929391 187 + 5252280 TCCTTCTGCTTCGTGACGCCTTCTAACCTGCAGGC-TCATGTTCAGACATCTGTGCAGAATGTTCTGGAATTGAGTTTCACATTTCC-AGAGGAATCATGAGTCACATTA--------------GAATAAGCACTTAAGGAGAGAAAAG-AGAAGGAACACAAGGGAGGTGGATCTCATAAACTCGAAACCCCAAAGACTGACA i otoGar3.GL873658 I 3840 I 1 s dasNov3.JH576208 1679329 189 + 4416731 ttcttttgggtcgaaatatctcctaactttcAGGT-GGATATTCAGATGGCTTTGCCTAATGTTTTAGAATTTAGTCTCAGCTTTCCTAGGGGAAACATCATTCACATTGGAAAAAGTGCTAAAGAAGAGG------GGAAGAAGGAGG-AGAATG------AAGCAGATGATTC-CATAAAGTAGAAACCAAAAATACTAATA i dasNov3.JH576208 C 0 I 1 e mm10.chr12 89990502 5685 - 120129022 I a score=1171280.000000 s hg38.chr2_KI270774v1_alt 95922 161 + 223625 GGGGCATGAAGAGGCTCCAAGTC---------------------------------------------TCAG---------------------------------------------------GAGCGGGTCATTGAAGATGT--GTTA-TTTT-ATCATTTTCATGATG--AGATACAGCC--TGAAAGCAGATCACCCATGAAAACATGTCATCTCCCAGTGTTCGGAATGCAGTCATGGTG----ACCTTCCTACAGAACATCTCT- s panTro5.chr2A 110122652 162 - 111504155 GGGGCATGAAGAGGCTCCAAGTC---------------------------------------------TCAG---------------------------------------------------GAGCGGGTCATTGAAGATGT--GTTT-TTTTTATCATTTTCATGATG--AGATACAGCC--TGAAAGCAGATCACCCATGAAAACATGTCATCTCCCAGTGTTCGGAATGCAGTCACGGTG----ACCTTCCTACAGAACAACTCT- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1333866 162 + 114371477 GGGGCATGAAGAGGCTCCAAGTC---------------------------------------------TCAG---------------------------------------------------GAGCGGGTCATTGAAGATGT--GTTT-TTTTTATCATTTTCATGATG--AGATACAGCC--TGAAAGCAGATCACCCATGAAAACATGTCATCTCCCAGTGTTCGGAATGCAGTCACGGTG----ACCTTCCTACAGAACAACTCT- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1359697 161 + 1464242 GGGGCATGAAGAGGCTCCAAGTC---------------------------------------------TCAG---------------------------------------------------GAGCGGGTCATTGAAGATGT--GTTA-TTTT-ATCATTTTCATGATG--AGATACAGCC--TGAAAGCAGATCACCCATGAAAACATGTCATCTCCCAGTGTTCGGAATGCAGTCATGGTG----ACCTTCCTACAGAACATCTCT- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1084441 161 + 81552678 GGGGCATGAAGAGGCTCCAAGTC---------------------------------------------TCAG---------------------------------------------------GAGCGGGTCACTGAAGACGT--GTTA-TTTT-ATCATTTTCATGATG--AGATACAGCC--TGAAAGCAGATCACCCATGAAGACATGTCATCTCCCAGCGTTCAGAGTGCAACCGTGGTG----ACCTTCCTACCGGGCATCTCT- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1415492 163 + 108979918 GACGCGTGAAGAGGCTCAGAGTC---------------------------------------------TCAG---------------------------------------------------GAGCGGGTCATTGAAGACACATGTTA-TTTT-ATCATTTTCATGATG--AGATACAGCC--TGAAAGCAGATCAACTGTGAAGACACGTCATCTCCCAGTGTTGAGAATGCAGTTGTGGTG----ACCTTCCTACTGGGTATCTCT- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1387873 163 - 111193037 GACGCGTGAAGAGGCTCAGAGTC---------------------------------------------TCAG---------------------------------------------------GAGCGGGTCATTGAAGACACATGTTA-TTTT-ATCATTTTCATGATG--AGATACAGCC--TGAAAGCAGATCAACTGTGAAGACACGTCATCTCCCAGTGTTGAGAATGCAATTGTGGTG----ACCTTCCTACTGGGTATCTCT- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1416343 163 + 3644372 GACGCGTGAAGAGGCTCAGAGTC---------------------------------------------TCAG---------------------------------------------------GAGCGGGTCATTGAAGACACATGTTA-TTTT-ATCATTTTCATGGTG--AGATACAGCC--TGAAAGCAGATCAACTGTGAAGACACGTCATCTCCCAGTGTTGAGAATGCAATTGTGGTG----ACCTTCCTACTGGGTATCTCT- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1369894 163 - 10304083 GGGGCACGAAGAGGCTCAGAGTC---------------------------------------------TCAG---------------------------------------------------GAGCGAGTCATTGAAGACACATGTTA-TTTT-ATCATTTTCATGATG--AGATACAGCC--TGAAAGCAGATCAACTGTGAAGACACGTCATCTCCCAGTGTTGAGAATGCAATTGTGGTG----ACCTTCCTACTGGGTATCTCT- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1445184 163 - 107702431 GACGCGTGAAGAGGCTCAGAGTC---------------------------------------------TCAG---------------------------------------------------GAGCGGGTCATTGAAGACACATGTTA-TTTT-ATCATTTTCATGATG--AGATACAGCC--TGAAAGCAGATCAACCGTGAAGACACCTCATCTCCCAGTGTTGAGAATGCAATCGTGGTG----ACCTTCCTACTGGGTATCTCT- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 923508 163 - 2200435 GGGGCACGAAGAGGCTCAGAGTC---------------------------------------------TCAG---------------------------------------------------GAGCGGGTCATGGAAGACACATGTTA-TTTT-ATCATTTTCATGATG--AGATACAGCC--TGAAAGCAGATCAACCGTGAAGACACGTCATCTCCCAGTGTCGGGAATGCAATGGTGGTG----ACCTTCCTACTGGGTTTCTCT- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1359691 161 - 13651311 GGGGCATGAGGAGGCTCAGAGTC---------------------------------------------TCAG---------------------------------------------------GAGCGGGTCATTGAAAACAC--GTTA-TTTT-ATCATTTTCATGATG--AGATACAGCC--TGAAAGCAGATCAACCGTGAAGACACGTCATCTCCCAGCGTTGAGAATGCAATCGTGGTG----ACCTTCCTACTGGGCATCTCT- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1361776 164 - 108792865 GGGGCACAAAGAGGCTCAG-GTC---------------------------------------------TCAG---------------------------------------------------GAGAGGGTC-TTGAAGACAC--GCTGTTTTT-TTCATTTTCATGATG--AGATGCAGCC--CGAAAGCAGATCAACCACGAAGACCCGTCATCTCTCAGCTTTTGAAACGCCATCGTGGTGACTAACCTTCCTACTGTGTGTCTCT- i calJac3.chr14 I 1 I 2 s saiBol1.JH378218 1211205 152 - 7082604 GGGGCACAAAGGGGCGCC--GCC---------------------------------------------TCCG---------------------------------------------------GACAGGGTCGTTGGAGACGC--GCCG-CTTT-TTCGTTTTCATGATG--AGATGCAGTC--TGAAAGCAGATCCACCACGAGGCCCCGTCCTCTCTCAGCTTTTGAAACGCTGTCGTGGTG----ACCTTCCTGCTGTG-------- i saiBol1.JH378218 I 1 C 0 s cebCap1.NW_016107827v1 1299071 154 + 1864846 GGGGCCCAAAGACGCTCAACGTC---------------------------------------------TCAG---------------------------------------------------GAGAGGGTCGTTGAAGACAC--GCCG-CTTT-TTCACTTTCATGATG--AGATGCAGCC--CGAAAACAGATCAACCACAAAGACCTGACCTCTCTCAGCTTTTGAAACGCCGTCGTGGTG----ACCTTCCTACTGTG-------- i cebCap1.NW_016107827v1 I 1 C 0 s otoGar3.GL873658 929579 204 + 5252280 AGGGAGTGGGGAGCTTCAAAGCCAAATAAACCCCTGGGATGGAGACCTTCCTAGTGATGTCATGATAGCCAG---------------------------------------------------AAG-GAACCACTGAAAACTCACACTAATTTT-TCCACTTCTACACTC--ACATGTGGCCAGTGAAGACTGACATTCTG---AACCAGCTCCTCTCCTGCCTTTCAGGGTGTGG-CATGCTG-----CCTTCTCGTTG-GCGGCCCT- i otoGar3.GL873658 I 1 I 2 s dasNov3.JH576208 1679519 218 + 4416731 AGAAAATGGAGAGGTTCAAAGGC---------------------------------------------TCAGGTCAATTCACAGCTACAATGAAAGTCTTTATAATGATGCCATAATTAGCCTGAAAGTATCATTGAAAATACATGTTA-GTTTGATCATTTTCATACTGACATATATAATC--AAAAGCTGGATTAACCATGAAAACATTTCATCTCTCACCTTTTAGAATAGAGACACTATG----ACCTTCATCTTCATCATATCTC i dasNov3.JH576208 I 1 C 0 e aotNan1.NW_018513311v1 91866 164 + 287728 I e mm10.chr12 89990502 5685 - 120129022 I a score=147913.000000 s hg38.chr2_KI270774v1_alt 96083 25 + 223625 GTCTTTGTGGGGACTCTT-TTGA---------------------------------------------------------------------------------------TGG s panTro5.chr2A 110122814 25 - 111504155 GTCTTTGTGGGGACTCTT-TTGA---------------------------------------------------------------------------------------TGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1334028 25 + 114371477 GTCTTTGTGGGGACTCTT-TTGA---------------------------------------------------------------------------------------TGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1359858 25 + 1464242 GTCTTTGTGGGGACTCTT-TTGA---------------------------------------------------------------------------------------TGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1084602 25 + 81552678 GTCTTTGTGGGGACTCTC-TTGA---------------------------------------------------------------------------------------TTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1415655 25 + 108979918 GTCTTTGTGGGGACTCTT-TTGA---------------------------------------------------------------------------------------TGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1388036 25 - 111193037 GTCTTTGTGGGGACTCTT-TTGA---------------------------------------------------------------------------------------TGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1416506 25 + 3644372 GTCTTTGTGGGGACTCTT-TTGA---------------------------------------------------------------------------------------TGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1370057 25 - 10304083 GTCTTTGTGGGGACTCTT-TTGA---------------------------------------------------------------------------------------TGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1445347 25 - 107702431 GTCTTTGTGGGGACTCTT-TTGA---------------------------------------------------------------------------------------TGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 923671 112 - 2200435 GTCTTTGTGGGGACTCTT-TTGATGGGTGTGTGACGTGGATTGAGGGGAGAATGGGTGTGTGACGTGGATTGAGGGGAGAATGGGTGTGTGACGTGGATTGAGGGGAGAATGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1359852 25 - 13651311 GTCTTTGTGGGGACTCTT-TTGA---------------------------------------------------------------------------------------TGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1361942 25 - 108792865 ATCTTTGTGGAGACTCTT-CGGA---------------------------------------------------------------------------------------CGG i calJac3.chr14 I 2 C 0 s saiBol1.JH378218 1211357 19 - 7082604 ------GTGGAGACTCTT-CTGA---------------------------------------------------------------------------------------TGG i saiBol1.JH378218 C 0 I 9 s cebCap1.NW_016107827v1 1299225 8 + 1864846 -------------CGCCT-CGG------------------------------------------------------------------------------------------- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 92030 25 + 287728 GTCTTTGTGGAGACTCTT-CCGA---------------------------------------------------------------------------------------TGC i aotNan1.NW_018513311v1 I 164 C 0 s otoGar3.GL873658 929785 23 + 5252280 GCCTCAGTGCTGCCTCTTGCCGA------------------------------------------------------------------------------------------ i otoGar3.GL873658 I 2 C 0 s dasNov3.JH576208 1679737 15 + 4416731 ----------AGACTTTT-TTGG---------------------------------------------------------------------------------------TGT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89990502 5685 - 120129022 I a score=197883.000000 s hg38.chr2_KI270774v1_alt 96108 28 + 223625 GTGCATGATGAGGATT-GAGGGGAGAATG-------- s panTro5.chr2A 110122839 28 - 111504155 GTGCGTGATGAGGATT-GAGGGGAGAATG-------- i panTro5.chr2A C 0 I 4 s panPan2.chr2A 1334053 28 + 114371477 GTGCGTGATGAGGATT-GAGGGGAGAATG-------- i panPan2.chr2A C 0 I 4 s gorGor5.CYUI01015607v1 1359883 27 + 1464242 GTGCATGATGAGGATT-GA-GGGAGAATG-------- i gorGor5.CYUI01015607v1 C 0 I 4 s nomLeu3.chr19 1084627 28 + 81552678 GTGCATGACGAGGATT-GAGGGGAGAATG-------- i nomLeu3.chr19 C 0 I 4 s rheMac8.chr13 1415680 28 + 108979918 GTGTGTGATGTGGATT-AAGGGGAGAATG-------- i rheMac8.chr13 C 0 I 4 s macFas5.chr13 1388061 28 - 111193037 GTGTGTGATGTGGATT-AAGGGGAGAATG-------- i macFas5.chr13 C 0 I 4 s macNem1.NW_012011978v1 1416531 28 + 3644372 GTGTGTGATGTGGATT-AAGGGGAGAATG-------- i macNem1.NW_012011978v1 C 0 I 4 s cerAty1.NW_012000820v1 1370082 28 - 10304083 GTGTGTGATGTGGATT-AAGGGGAGAATG-------- i cerAty1.NW_012000820v1 C 0 I 4 s chlSab2.chr14 1445372 28 - 107702431 GTGTGTGATGTGGATT-AAGGGGAGAATG-------- i chlSab2.chr14 C 0 I 4 s manLeu1.NW_012103754v1 923783 28 - 2200435 GTGTGTGACGTGGATT-AAGGGGAGAATG-------- i manLeu1.NW_012103754v1 C 0 I 4 s colAng1.NW_012118821v1 1359877 28 - 13651311 GTGTGTGATGTGGATT-AAGGGGAGAATG-------- i colAng1.NW_012118821v1 C 0 I 4 s calJac3.chr14 1361967 29 - 108792865 GTGCATGATGAGGATTGGGGGGGAGAACA-------- i calJac3.chr14 C 0 I 7 s cebCap1.NW_016107827v1 1299233 28 + 1864846 GTGCGTGATGCGGATT-GCGGGGAGAACA-------- i cebCap1.NW_016107827v1 C 0 I 7 s aotNan1.NW_018513311v1 92055 28 + 287728 GGGCGTGACGAGGACT-GCGGGGAGAACG-------- i aotNan1.NW_018513311v1 C 0 I 7 s otoGar3.GL873658 929808 24 + 5252280 --GTCCACAGGGGATG-GAGTGGGCAG---------- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1679752 36 + 4416731 ATCCATAATGAGAATG-GCATTAGGAACATTGCCTCG i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89990502 5685 - 120129022 I e saiBol1.JH378218 1211376 9 - 7082604 I a score=2153597.000000 s hg38.chr2_KI270774v1_alt 96136 254 + 223625 CATGCTGGT---GAACACACACTGAACTGTGctcatttttcacctcaacaaattggaaaa--aagtgtactttattcacctcttagtgataagaaaactaggggcttggggacaggaagcaaaaggctcagagttgtagagcgagtcatcggtgggcctgggagctgca----cccaACCCA-ATCCTCGGAAGATTAACAGCCCCTTTTTCACAGG--GTATTTAACTGT-GAAAGTAAGAGGGAGGAAAATGCAAGTGTCACAAG s panTro5.chr2A 110122871 254 - 111504155 CATGCTGGC---GAACACACACTGAACTGTGctcatttttcacctcaacacgttggaaaa--aagtgtactttattcacctcttagtgataagaaaactaggggctcagggacaggaaacaaaaggctcagagttgtagagcgagtcatcggtgggcctgggagctgca----cccaACCCA-ATCCTGGGAAGATTAACAGCCCCTTTTTCACAGG--GTATTTAACTGT-GAAAGTAAGAGGGAGGAAAATGCAAGTGTCACAAG i panTro5.chr2A I 4 C 0 s panPan2.chr2A 1334085 254 + 114371477 CATGCTGGC---GAACACACACTGAACTGTGctcatttttcacctcaacacattggaaaa--aagtgtactttattcacctcttagtgataagaaaactaggggctcggggacaggaagcaaaaggctcagagttgtagagcgagtcatcggtgggcctgggagctgca----cccaACCCA-ATCCTCGGAAGATTAACAGCCCCTTTTCCACAGG--GTATTTAACTGT-GAAAGTAAGAGGGAGGAAAATGCAAGTGTCACAAG i panPan2.chr2A I 4 C 0 s gorGor5.CYUI01015607v1 1359914 253 + 1464242 CATGCTGGC---GAACACACACTGAACTGTGctcatttttcacctcaacacattggaaaa--aagtgtactttattcacctcttagtgataagaaaactaggggctcggggacaggaagc-aaaggctcagagttgtagagcgagtcatcggtgggcctgggagctgca----cccaACCCA-ATCCTCAGAAGATTAACAGCCCCTTTTTCACAGG--GTATTTAACTGT-GAAAGTAAGAGGGAGGAAAATGCAAGTGTCACAAG i gorGor5.CYUI01015607v1 I 4 C 0 s nomLeu3.chr19 1084659 254 + 81552678 CGTGCTGGC---GAACACACGCTGGACTGCGctcatttttcacctcaacaaattggaaaa--aactgtactttattcacctcttagtgataagagaactgagggctcagggacagaaagcatcaggctcggagttgtagagcgagtcatcgctgggcccgggagctgca----cccaACCCA-ATCCTCAGAAGATTAACAGCCCCTTTTTCACAGG--GTATTTCACTGA-GAAAGTAAGAGGGAGGAAAATGCAAGTGTCACAAG i nomLeu3.chr19 I 4 C 0 s rheMac8.chr13 1415712 253 + 108979918 TGTGCTGGT---GAACACACGCTAGACTGTGctcatttttcacctcaacaaattgggaaa--aagtgtagtttattcacctcttaatgataagaaaact-ggttttcagggatagaaagcaataggctcagagttgtagagtgagtcattggtgggcctgggagctgca----cccaACCCA-GTCCTCGGGAGATTAGCAGCCCCTTTTTTACAGG--GTATTTAACTGC-GAAAGTAAGAGGGAGGAAAATGCGAGTGTCACAAG i rheMac8.chr13 I 4 C 0 s macFas5.chr13 1388093 253 - 111193037 TGTGCTGGT---GAACACACGCTAGACTGTGctcatttttcacctcaacaaattgggaaa--aagtgtagtttattcacctcttaatgataagaaaact-ggttttcagggacagaaagcaataggctcagagttgtagagtgagtcattggtgggcctgggagctgca----cccaACCCA-GTCCTCGGGAGATTAGCAGCCCCTTTTTTACAGG--GTATTTAACTGC-GAAAGTAAGAGGGAGGAAAATGCGAGTGTCACAAG i macFas5.chr13 I 4 C 0 s macNem1.NW_012011978v1 1416563 254 + 3644372 TGTGCTGGT---GAACACACGCTAGACTGTGctcatttttcacctcaacaaattgggaaa--aagtgtagtttattcacctcttaatgataagaaaact-ggttttcagggacagaaagcaataggctcagagttgtagagtgagtcattggtgggcctgggagctgca---ccccaACCCA-GTCCTCGGGAGATTAGCAGCCCCTTTTTTACAGG--GTATTTAACTGC-GAAAGTAAGAGGGAGGAAAATGCGAGTGTCACAAG i macNem1.NW_012011978v1 I 4 C 0 s cerAty1.NW_012000820v1 1370114 253 - 10304083 TGTGCTGGT---GAACACACGCTAGACTGTGctcatttttcacctcaacaaattgggaaa--aagtgtagtttattcacctcttaatgataagaaaact-ggttttcagggacagaaagcaacaggctcagagttgtagagtgagtcattggtgggcctgggagctgca----cccaACCCA-GTCCTCGGGAGATTAACAGCCCCTTTTTCACAGG--GTATTTAACTGC-GAAAGTAACAGGGAGGAAAATGCGAGTGTCACAAG i cerAty1.NW_012000820v1 I 4 C 0 s chlSab2.chr14 1445404 253 - 107702431 CGTGCTGGT---GAACACACGCTGGACTGTGctcatttttcacctcaacaaattgggaaa--aagtgtagtttattcacctcttaatgataagaaaact-ggttttcagggacagaaagcaacaggctcagagttgtagagtgagtcatcggtgggcccgggagctgca----cccaACCCA-ATCCTCGGGAGATTAACAGCCCCTTTTTCACAGG--GTATTTAACTGC-GAAAGTAACAGGGAGGAAAATGCGAGTGTCACAAG i chlSab2.chr14 I 4 C 0 s manLeu1.NW_012103754v1 923815 253 - 2200435 TGTGCTGGT---GAACACACGCTGGACTGTGctcatttctcacctcaacaaattgggaaa--aagtgtagtttattcacctcttaatgataagaaaacc-ggttttcagggacagaaagcaacaggctcagagttgtagagtgagtcattggtgggcctgggagctgca----cccaaccca-gtcctcgggagattaccagcccctttttcACAGG--GTATTTAACTGC-GAAAGTAACAGGGAGGAAAATGCGAGTGTCACAAG i manLeu1.NW_012103754v1 I 4 C 0 s colAng1.NW_012118821v1 1359909 253 - 13651311 CGTGCTGGT---GAACACACGCTGGACTGTGctcgtttttcacctcaacaaattgggaaa--aagtgtagtttattcacctcttaatgataacaaaact-ggttttcagggacagaaagcaacaggctcagagttgtagagcgagtcatcggtgggcccgggagctgca----cccaACCCA-ATCCTCGGGAGATTAACAGCCCCTTTTGCACAGG--GTATTTAACTGT-GAAAATAAGAGGGAGGAAAATGTAAGTGTCACAAG i colAng1.NW_012118821v1 I 4 M 6210 s calJac3.chr14 1362003 242 - 108792865 CATGCTGGC---GAACACGGGCTGGACTGTGCTCATTTTTCACCTCCACAAACTGGAAAA--AAGTGTATTTTATCCACCTCATAGTGATAAGAAAACTGAGGGCTGA-GTACAGAAAGGAACAGGCTCCGAGCTGCAG-GCTAGTCCTCGGCGGGCCCGGGAGCTGCA----CCCATCCCA-GTTCCTGCAAGAGTCACATCCC--TTTCCACAGG--GTAGTTAACCGC--AGAGGAAGAGGAAGGC-------AGTGTCACCAG i calJac3.chr14 I 7 C 0 s saiBol1.JH378218 1211385 243 - 7082604 CGTGCTGGC---GAACACGTGCTGGACTGTGCTCGTTTTTCACCTCAACAAACTGGAAAA-GAAGTGTATTTTATTCACCTTGTAGTGATAAGAAAACTGAGGGCTCA-GGACAGAAAGGAACAGGCTCTGAGCTGCAG-GCGAGCCCTCGGCGGGCCCGGGAGCTGCA----CCCGTCCCA-GTCCCCGCGAGAGTCACATCCC--TTTTCACAGG--GGATTTAACTGC--AGAAGAAGAGGAAGGC-------AGTGTCGCCAG i saiBol1.JH378218 I 9 C 0 s cebCap1.NW_016107827v1 1299268 244 + 1864846 CATGCTGGC---GAACATGTGCTGGACTGTGctcatttttcacctcaacaaactggaaaaaaaagtgtattttatccacctcgtagtgataagaaaactgagggctca-gggCAGAAAGGAACAGGCTCCGAGCTGCAG-GCGAGCCCTCGGTGGCCCCGGGAGCTGCA----CCCGTCCCA-GTCCCCAAAAGAGTCACGTCCC--TTTTCACAGG--GTATTTAACTGC--AGAAAAAGAGGAAGGC-------GGTGTCACCGG i cebCap1.NW_016107827v1 I 7 C 0 s aotNan1.NW_018513311v1 92090 242 + 287728 CGCGCTGGC---GAACACGTGCTGGACTGTGCTCATTTCTCACCTCAACACACTGGGAAA--AAGTGTATTTCATCCACCTCGTGGTGATAAGAAAACCGAGGGCTCA-GGACGGAAAGGAACAGGCTCCGAGCTGCAG-GCGAGTGCTCGGCGGGCCCAGGAGCTGCA----CCCATCCCG-GTCCCCGCAAGAGTCACGTCCC--TTTTCACCGG--GTATTTAGCGGC--AGGGTAAGAGGAAGGC-------AGTGTCACCAG i aotNan1.NW_018513311v1 I 7 C 0 s otoGar3.GL873658 929832 219 + 5252280 ----CTGGCTGAGAGCACATCCTGCATCCTGTTCATGCTCCAGC-CATGGGGCTGG--AA--AAGCATATTTCCTTCAGCTTCCAGTGGTTAGGACAGCATGGCCTCAGGGAC------------------AGCTGTAAGGACAGC-----ATGGCCTCAGGGACAGCAGACAACCAGCCCA-GGCCT-GCAGGAGTCG--------TCGGGGCAGGCAGTGCTGTGCTGAGGACAGGAAGAGGCAGGAA------ACTGCCGTGGG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1679788 228 + 4416731 TAAGCTGGT---GAACGCCTCCTGGATAGTattcatttactcagtcaccaaactgggaaa--tatggttcactatttaccttatagaaatatagaaatt-------tagaaatgctaaataactgatccaaaattacacagctagtcagtagtagtccca-cagtaaaa----cccaagcagttttcttccaaggttattctcctctTTTTT---GT--ACATTTAACTCA-GAA---AAGAAAGAGGAAAATG------------- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89990502 5685 - 120129022 I a score=346149.000000 s hg38.chr2_KI270774v1_alt 96390 50 + 223625 TCTGGATT-TAGTTGGTTTATTCTTTCTCCCTGTATAA--TTTTTCCCCTCTT s panTro5.chr2A 110123125 50 - 111504155 TCTGGATT-TAGTTGGTTTATTCTTTCTCCCTGTATAA--TTTTTCCCCTCTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1334339 50 + 114371477 TCTGGATT-TAGTTGGTTTATTCTTTCTCCCTGTATAA--TTTTTCCCCTCTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1360167 50 + 1464242 TCTGGATT-TAGTTGGTTTATTCTTTCTCCCTGTATAA--TTTTTACCCTCTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1084913 50 + 81552678 GGTGGATT-TAGTTGGTTTATTCTTTCTCCCTGTATAA--TTTTTCCCCTCTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1415965 51 + 108979918 GTTGGATT-TAGTTGGTTTATTCTTTCTCCCTGTATAA-TTTTTTCCCCTCTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1388346 51 - 111193037 GTTGGATT-TAGTTGGTTTATTCTTTCTCCCTGTATAA-TTTTTTCCCCTCTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1416817 51 + 3644372 GTTGGATT-TAGTTGGTTTATTCTTTCTCCCTGTATAA-TTTTTTCCCCTCTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1370367 51 - 10304083 GTTGGATT-TAGTTGGTTTATTCTTTCTCCCTGTATAA-TTTTTTCCCCTCTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1445657 51 - 107702431 GTTGGATT-TAGTTGGTTTATTCTTTCTCCCTGTATAA-TTTTTTCCCCTCTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 924068 51 - 2200435 GTTGGATT-TAGTTGGTTTATTCTTTCTCCCTGTATAA-TTTTTTCCCCTCTT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1362245 45 - 108792865 GGCGA-TT-TAG-----TTGTTCTTTCTCTCCAGGTAA-GTTTTTCCCCTTTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1211628 42 - 7082604 GGCGG-----AC-----TTATTCTTTCTCCCCGTGTAA-GGTTTTCCCCTGTT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1299512 46 + 1864846 GGCGGATT-TAG-----TTATTCTTTCTCCTTGTGTAA-GTTTTTTCCCTGTT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 92332 46 + 287728 GGCGGATT-TAG-----TTATTCTTTCTCCCTGTGTAA-CTTTTCCCCCTTTT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 930051 53 + 5252280 GGTGGGTTGCCATTGTTTTCTCTCTTCTCCACACACAGATTTTCTTTCCTTTT i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1680016 48 + 4416731 --TGAATT-TAACTGTTTTTAAATTTCTCATTAAATAA-GTTTTCTTTCCCT- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89990502 5685 - 120129022 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=3360762.000000 s hg38.chr2_KI270774v1_alt 96440 363 + 223625 CTTCCTAACTCATTCGGCCAGAGGCTGGACTGCATGTGGACCCCGATGACATGGCACTTTGTTTCTGACCAGTCAGGACACACAAGAGGCCCGGCGCAAACACAACAAAGC-CCGCAGACATTCTGTCCCCACGAAGAACGGA--CGCCACTCGACTTCCTAGCATCTTGACGGGCTATCCAAGCGCAGAGTCAGTTTATAAGGTGGGTAACCAAGTCCCTGGAAGGCAATTGAGGCGCCCATTTCAGAAGAGTTACAGCCGTGAA--AATTACTCAGCAGTGCA----------G---------TT--------------GGCTGAGAAGAGGAAA--AAAGGTCAGGTTGTAAAGCTTTTTATTTTTCCATTTTCTAAGAGAAATTCATCATTGGAACTTG s panTro5.chr2A 110123175 363 - 111504155 CTTCCTAACTCATTCGGCCAGAGGCTGGACTGCATGTGGACCCTGATGACATGGCACTTTGTTTCTGACCAGTCAGGACACACAAGAGGCCCGGCGCAAACACAACAAAGC-CCGCAGACATTCTGTCCCAACGAAGAACAGA--CGCCACTCCACTTTCTAGCGTCTTGACGGGCTATCCAAGCGCGGAGTCAGTTTATAAGGTGGGTAACCAAGTCCCTGGAAGGCAATTGAGGCGCCCATTTCAGAAGAGTTACAGCCGTGGA--AATTACCCAACAGTGCA----------G---------TT--------------GGCTGAGAAGAGGAAA--AAAGGTCAGGTTGTAAAGCTTTTTATTTTTCCATTTTCTAAGAGAAATTCATCATTGGAACTTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1334389 363 + 114371477 CTTCCTAACTCATTCGGCCAGAGGCTGGACTGCATGTGGACCCTGATGACATGGCACTTTGTTTCTGACCAGTCAGGACACACAAGAGGCCCGGCGCAAACACAACAAAGC-CCGCAGACATTCTGTCCCAACGAAGAACAGA--CGCCACTCCACTTTCTAGCGTCTTGACGGGCTATCCAAGCGCGGAGTCAGTTTATAAGGTGGGTAACCAAGTCCCTGGAAGGCAATTGAGGCGCCCATTTCAGAAGAGTTACAGCCGTGGA--AATTACCCAACAGTGCA----------G---------TT--------------GGCTGAGAAGAGGAAA--AAAGGTCAGGTTGTAAAGCTTTTTATTTTTCCATTTTCTAAGAGAAATTCATCATTGGAACTTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1360217 363 + 1464242 CTTCCTAACTCATGCGGCCAGAGGCTAGACTGCATGTGGACCCCGATGACATGGCACTTTGTTTCTGACCAGTCAGGACACACAAGAGGCCCGGCGCAAACATAACAAAGC-CCGCAGACATTCTGTCCCCACGAAGAACAGA--CGCCACTCCACTTCCTAGCATCTTGACGGGCTATCCGAGCGCGGAGTCAGTTTATAAGGTGGGTAACCAAGTCCCTGGAAGGCAATTGAGGCGCCCATTTCAGAAGAGTTACAGCCGTGGA--AATTACCCAACAGTGCA----------G---------TT--------------GGCTGAGAAGAGGAAA--AAAGGTCAGGTTGTAAAACTTTTTATTTTTCCATTTGCTAAGAGAAATTCATCATTGGAACTTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1084963 363 + 81552678 CTTCCTAACTCATTCGGCCAGAGGCTGGACCGCATGTGGACCCCGATGACATGGCACTTTGTTTCTGACCAGTCAGGACACACAAGAGGCCTGGCGCAAACACAACAAAGC-CCGCAGACATTCTGTTCCCATGAAGAACGGA--CGCCACTCCACTTCCCAGCATCTTGACGGGGTATCAGAGCGCGGAGTCGGTTTATAAGGCGGGTAACCAAGTCCCTGGGAGGCAATTGAGGCGCACATTTCAGAAGAGTTACAGCTGTGGA--AAGTACCCAACAGTGCA----------G---------TT--------------GGCTGAGAAGAGGAAA--AAAGGTCAGGTTGTAAAGCTTTTTATTTTTCCATTTTCTAAGAGAAATTCATCATTGGAACTTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1416016 361 + 108979918 CTTCCTAACTCATACGGCCAGAGGTTGGACCACCTGTGCACCCCGATGACATGGCAGTTTGTTTCTGACCAGTCAGGACACACAAGAAGCCTGGTGCAAACACAACAAAGC-CCGCAGACATTCTGTTCCCACGAAGAACGGG--CGCCACTCCACTTCCTAGCATCTTGACGGGGTATCAGAGCGTGGAGTCGGTTTATAAGGTGGGTAACCAAGTCCCTGGAAGGCAATTGAGGCGCTCATTTCAGAAGAGTTACAGCCGCACA--AAGTGCCCAACACTGCA----------G---------CT--------------GGCTGAGAAGA-GAAG--AAAGGTCAGGTTGTAAAA-TTTTTATGTTTCCATTTTCTAAGAGAAATCCATCACTGGAACTTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1388397 361 - 111193037 CTTCCTAACTCATACGGCCAGAGGTTGGACCACCTGTGCACCCCGATGACATGGCAGTTTGTTTCTGACCAGTCAGGACACACAAGAAGCCTGGTGCAAACACAACAAAGC-CCGCAGACATTCTGTTCCCACGAAGAACGGG--CGCCACTCCACTTCCTAGCATCTTGACGGGGTATCAGAGCGTGGAGTCGGTTTATAAGGTGGGTAACCAAGTCCCTGGAAGGCAATTGAGGCGCTCATTTCAGAAGAGTTACAGCCGCACA--AAGTGCCCAACACTGCA----------G---------CT--------------GGCTGAGAAGA-GAAG--AAAGGTCAGGTTGTAAAA-TTTTTATGTTTCCATTTTCTAAGAGAAATCCATCACTGGAACTTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1416868 361 + 3644372 CTTCCTAACTCATACGGCCAGAGGTTGGACCACATGTGCACCCCGATGACATGGCAGTTTGTTTCTGACCAGTCAGGACACACAAGAAGCCTGGTGCAAACACAACAAAGC-CCGCAGACATTCTGTTCCCACGAAGAACGGG--CGCCACTCCACTTCCTAGCATCTTGACGGGGTATCAGAGCGTGGAGTCGGTTTATAAGGTGGGTAACCAAGTCCCTGGAAGGCAATTGAGGCGCTCGTTTCAGAAGAGTTACAGCCGCACA--AAGTGCCCAACACTGCA----------G---------CT--------------GGCTGAGAAGA-GAAG--AAAGGTCAGGCTGTAAAA-TTTTTATGTTTCCATTTTCTAAGAGAAATCCATCACTGGAACTTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1370418 360 - 10304083 CTTCCTAACTCATACGGCCAGA-GTTGGACCACATGTGCACCCCGATGACATGGCAGTTTGTTTCTGACCAGTCAGGATACACAAGAAGCCTGGTGCAAACACAACAAAGC-CCATAGACATTCTGTTCCCACGAAGAACGGG--CGCCACTCCACTTCCTAGCATCTTAATGGGGTATCAGAGCGTGGAGTCGGTTTATAAGGCGGGTAACCAAGTCCCTGGAAGGCAATTGAGGCGCTCATTTCAGAAGAGTTACAGCCGCAGA--AAGTGCCCAACACTGCA----------G---------TT--------------GGCTGAGAAGA-GAAA--AAAGGTCAGGTTGTAAAA-TTTTTATTTTTCCATTTTCTAAGAGAAATCCATCACTGGAACTTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1445708 361 - 107702431 CTTCCTAACTCATACGGCCAGAGGTTGGACCACATGTGCACCCCGATGACATGGCAGTTTGTTTCTGACCAGTCAGGACATACAAGAAGCCTGGTGCAAACACAACAAAGC-CCGCAGACATTCTGTTCCCACGAAGAACGGG--CACCACTCCACTTCCTAGCATCTTAATGGGGTATCAGAGCATGGAGTCGGTTTATAAGGCGTGTAACCAAGTCCCTGGAAGGCAATTGAGGCGCACATCTCAGAAGAGTTACAGCCGCAGA--AAGTGCCCAACAGTGCA----------G---------TT--------------GGCTGAGAAGA-GAAA--AAAGGTCAGGTTGTAAAA-TTTTTATTTTTCCATTTTCTAAGAGAAATCCATCACTGGAACTTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 924119 360 - 2200435 CTTCCTAACTCGTACGGCCAGA-GTTGGACCACATGTGCACCCCGATGACATGGCAGTTTGTTTCTGACCAGTCAGGACACACAAGAAGCCTGGTGCAAACACAACAAAGC-CCATAGACATTCTGTTCCCACGAAGAACGGG--CGCCACTCCACTTCCTGGCATCTTAATGGGGTATCAGAGCGTGGAGTTGGTTTATAAGGTGGGTAACCAAGTCCCTGGAAGGCAATTGAGGCGCTCATTTCAGAAGAGTTACAGTCGCAGA--AAGTGCCCAACACTGCA----------G---------TT--------------GGCTGAGAAGA-GAAG--AAAGGTCAGGTTGTAAAA-TTTTTATTTTTCCATTTTCTAAGAGAAATCCATCACTGGAACTTG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1362290 365 - 108792865 CTTCCTGACCCTCACAGCCAGAGGCCGGACCGCACATGAACCCCGATGACAGGGCACCTTGTTTCTGACCAGTCAGGACGCACAAGAGGCCTGGCACCTGCACAACAGAGCTCCGCGGACATTCCTTTCCTGCAAAGAGTGGA--GGCCACTCCACCTGCTGGCATCTTGACCGGGTATCAGAGCGTGGAGTCAGCTTATAAGGCGGGTAACTGAGTCCCTGTGAGGCAATTGCGGTG-ACATTTCAAAAGAGTCACAGCCACAGATAAAGTACCCAACAGTGCA----------G---------GT--------------GGCCGAGAAGA-GAAAGGAAAGGTCA-GTTGTAAAGCTTTTCATTTTTCCATTTTCGGAGAGAAATCCATCATTGAAACTTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1211670 364 - 7082604 CTTCCTGA--CTCACAGCCACAGGCCGGACCGCACGTGGACGCTGACGACGCGGCCCTTTGTTTCTGACCAGTCGGGACACACAAGAGGCCTGGCGCGTGCACAACAGAGCCCCGCGGACATTCCGTTCCTGCGAAGGGCGGA--GGCCACTCCAGCTGCTGGCATCTTGACCGGGTATCCGAGCGTGGAGTTGGCTTATAAGGCGGGTAACTGCGTCCCTGGGAGGCCATTGTGGCG-ACATTTCAGAAGAGTCACAGCCACGGATGAAGTACCCAACAGCGCA----------G---------GT--------------GGCCGAGAAGA-GAAAAGAAAGGTCAGGTCGTAAAGCTTTTCGTTTTTCCATTTTCTAAGAGAAATCCATCATTGACCCTTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1299558 361 + 1864846 CTTCCTGACTCACACGGCCAGAGGCCGGACCGCACGTGAACCCTG-TGACACGGGACTTTGTTTCTGACCCATCAGGACACACAAGAGCCCTGGCGCACGCACAACAGAGC-CCGCGGACATTCCGTTCCTGCAAAGAGTGGA--GGCCACTCCACCTGCTGGCATCTTGACCGGGCATCAGAGCGCGGAGTTGGCTTATAAGGCGGGTAACTGAGTCCCCGGGAGGCAATTGCAGCG-ACATTTCAGAAGAGTCACAGCCACGGATAAAGTACCCAAAGGTGCA----------G---------GT--------------GGCCGAGGAGA-GAA---AAAGGTCAGGCTGTAAAGCTTTTCATCTTTCCATCTTCTAAGAGAAATCCATCATTGAAACTTG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 92378 360 + 287728 CTTCCTGACCCACACGGCCAGAGGCCGGACCGCACGTGAACCCTGAGGACACGGCACTTTGCTTCTGACCAGTCAGGACACACAAGAGGCCTGGCACGTGCAC-ACAGAGCCCCGCGGACATTCCGTTCCTGTGAAGAGCGGA--GGCCACTCCACCTGCTGGCATCTTGACCGGGTATCAGAGCGCGGAGTCGGCTTAAAGGGCGGGTAACTGAGTCCCTGGGAGGCAGCTGCGGCC-ACACTTCAGAGGAGTCACAGCCACGGATGAAGCGCCCAGCAGTGCA----------G---------GT--------------GGCCGAGAAGA-G-----AAAGGTCAGGTTGTGAGGCTTTTCATTTCCCCATTTTCTAAGAGAAATCCGTCACTGAAACGTG i aotNan1.NW_018513311v1 C 0 I 90 s otoGar3.GL873658 930104 362 + 5252280 CTTCCTAACTCATGTGGCCAGAGGCTGGACCTCAAGTGGACCCAAATGACGTGGTGCTTTGTTTCTGGACAGTCAGGACACTCAAGAAGCCTTGAGCAAACACAGCAATGTCCTGCAAACGTGCCGTTCCTGCAGAGGGCGGGGCCGCCA----------TGACATCTGGAGTGGGCATCAGAGCGTGGAGTCGGTTTATATGGGGG----CTGCGTCCCTGGGAAGCACTTGAGGTGCTCAGTTCAGAAGTGTCAACACCACAGATAAGGCACCC-GCAGTGCACACATGAGTCC---------TT--------------GGCTGAGAAGA-GAAC--GGAGGTGAGGATGTTAAATTCTTGATTTTTCTGTTTTCACAGAGAAAGCCATCACTGAGGGCTG i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89996187 346 - 120129022 ctCTCTGTCTTTCTAGGTCAGGGG---GACTGAATGT---CCTCTAGGA-GTGGCACTTTTTTCCTGACCACCCAGGACACACAAGCA-CTTGGCAGAAACACAATACTAA---ACAAACAT-------------AGAATGGA---GCCACTCC---CACCAGAAGCTTGAGTGGGCATCAGAGCACAGAGTCCATTTATACAGGGAG--ATCAAGTCCCCAGAAAATCATCCAGATTCACATTTCAGAA--GTTAAGACCACAGAGAACACACCCAGCGGTGCA----------C---------ATCCTGCTTCTTCCGCTGCTGAGAAAA-GGAA--AACGTTCAGGTTGTAAAACTTTTTATTTTCCCCATTTCTGAGAGAAATCTATCATT-AAACGTG i mm10.chr12 I 5685 C 0 s dasNov3.JH576208 1680064 330 + 4416731 -TTCTTAAGTCGCGTGGCCAGGAAATGAATCTCATGTGAACGTAAGTGA------------------------------------------TGGTGCAAACATAACAATACCAAGCAAGCATTTCGTGGCCACAAAGAACAAA--GGCCACTCCATTTCCTAACAGCTTGAGTGGGTATCAGAGCATAGAGTCAGTTTATATGGTGGACAACTAAGTCCCTGGAAAGCAATTGAGGTTCACATTTCAGAAGAGCTACAGCCAATGATAAACTGCCGCACCTTGTG----------AGCTTGCCTCCT--------------GGCTGAGAAGA-GAA---AAAGGTCAGATTGTAAAACTTTCGATTTTTCCATTTTCTAAGAGAAATTCATCATTGAAACTTG i dasNov3.JH576208 C 0 C 0 e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=702670.000000 s hg38.chr2_KI270774v1_alt 96803 103 + 223625 TAAAGTGGCCCAAGAGTGGCTGTAATTTGGGCCATTATAGCAGGTATGGGTGGCGTCTCTCAGCAAAGctgactgactgactgatgagtgc------tgTTTGCAATGA s panTro5.chr2A 110123538 103 - 111504155 TAAAGTGGCCCAAGAGAGGCTGTAATTTGGGCCATTATAGCAGGTATGGGTGGCGTCTCTCAGCAAAGctgactgactgactgatgagtgc------tgTTTGCAATGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1334752 103 + 114371477 TAAAGTGGCCCAAGAGAGGCTGTAATTTGGGCCATTATAGCAGGTATGGGTGGCGTCTCTCAGCAAAGctgactgactgactgatgagtgc------tgTTTGCAATGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1360580 103 + 1464242 TAAAGTGGTCCAAGAGAGGCTGTAATTTGGGCCATTATAGCAGGTATGGGTGGCGTCTCTCAGCAAAGctgactgactgactgatgagtgc------tgTTTGCAATGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1085326 103 + 81552678 TAAAGTGGTCCAAGAGAGGCTGTAATTTAGGCCATTATAGCAGGTATGGGTGGCGTCTCTCAGCAAAGctgactgactgactgatgaatgc------tgTTTGCAATGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1416377 103 + 108979918 TAAACTGGTCCAAGAGAGGCTGTAATTTGGGCCATTATGGCAGGTGCAGGTGGCGTCTCCCAGCAAGGCGGACTGACTGACTGATGAGTGC------TGTTTGCAATGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1388758 103 - 111193037 TAAACTGGTCCAAGAGAGGCTGTAATTTGGGCCATTATGGCAGGTGCAGGTGGCGTCTCCCAGCAAGGCGGACTGACTGACTGATGAGTGC------TGTTTGCAATGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1417229 103 + 3644372 TAAACTGGTCCAAGAGAGGCTGTAATTTGGGCCATTATGGCAGGTGTGGGTGGCGTCTCCCAGCAAGGCGGACTGACTGACTGATGAGTGC------TGTTTGCAATGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1370778 103 - 10304083 TAAACTGGTCCAAGAGAGGCTGTAATTTGGGCCATTATGGCAGGTGCGGGTGGCGTCTCCCAGCAAGGTGGACTGACTGACTGATGAGTGC------TGTTTGCAATGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1446069 103 - 107702431 TAAACTGGTCCAAGAGAGGCTGTAATTTGGGCCATTATGGCAGGTGCAGGTGGCGTCTCCCAGCAAgacggactgactgactgatgagtgc------tgTTTGCAATGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 924479 103 - 2200435 TAAACTGGTCCAAGAGAGGCTGTAATTTGGGTCATTATGGCAGGTGCGGGTGGCGTCTCCCAGCAAGGCGGACTGACTGACTGATGAGTGC------TGTTTGCAATGA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1362655 86 - 108792865 -AACGTGGTCCATCAGAGGCTGTCCTTTGGGCCGTTGTGGCAGGTCTGGGTGGCGTCTCTTAGCAAGGCTGGCTGGCTGACTGGTGA---------------------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1212034 86 - 7082604 -AAAGTGGTCCAGCAGAGGCTGCCATTTGGGCCACTGTGGCGGGGCTGGGTGGCATCTCTTAGCAAGGCCGGCTGGCTGACTGGTGA---------------------- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1299919 86 + 1864846 -AAAGTGGTCCAGCAGAGGCTGTCATGTGGGCCATCGTGGCAGGTCTGGGTGGCGTCTCTTAGCAAGGCCGGCTGGCTGACTGGTGA---------------------- i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 930466 73 + 5252280 TAAAGTGGTCCGAGAAAGGCCATTACT-------------------CAGGGAGCTTTGCTCAGCCAAG----CTGACTGGCTGGTGACCGC------TGTGC------- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89996533 86 - 120129022 TAAAATTGTCTATGGGAGACCATTATT--GGGCAGTGTGGCAAA--TAGGT-GCTCTCCCTAACAAAGC-----------CTGGTGGTACC------CGTTCCTATTC- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1680394 104 + 4416731 GAAAGTAGTCCAA-AAAAGCCATTGTTAGGGCCTGTATGGTAAATACGGGTAGGTTCTCTTAACAAAG----TTAATCGATTGGTGGTTTTTTTGTGTGTTTTCAGTTG i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 92738 90 + 287728 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=4842488.000000 s hg38.chr2_KI270774v1_alt 96906 583 + 223625 CCTCCGCT-GGAACATG----------TGAGTCCTGTAGGGTCGATTCCTAGATCACCGTCTACTGAGACACATTCCTGTCAGCATGGACTCACTGGTGCTATCCTGCTTAACAAAATTAGTGGCTCAAAAATAGCCACAGAAAGCCTAAGAG-AAGAAAACAAGGA-TTTGAAAGTAGAAATGATGAATTTTGAATCTTCTGTTTTGTCTTAACAACT--AGAATTCTAAAATCATTTTA----TGGACATAAGAATGCTTTAAGAAATTCAATAGGCATT-TAGGGGTTTTATTTATCACTTTTATAAAGACTAAATTTCTAATAG----TACTCACTTTTTGCCACATAGATGC---ATTAGGGGAAACAGA---TTTTTTTCATTCCCAATAATTATTCCCAGTACTGTTACACTATTTGACATTACCAAAAATTTAAATAGGTTATTACTGAGATATATTGGCAACTGGAGCTGCC-AACATAAAAACTCTG------------------------------TTTTTGAATAATGGGGGCCT-GGGAGG----CCTGCTCAGCGCTGCAGTTT----CTGTA----------ACCTCCTGACATGGACGGCGAC-------TCTG-GTCTCGCAGACCCC---AGGC----CTGTGAGGGTCGCTCACTGCGG s panTro5.chr2A 110123641 583 - 111504155 CCTCCGCT-GGAACATG----------TGAGTCCTGTAGGGTCGATTCCTAGATCACCGTCTACTGAGACACATTCCTGTCAGCATGGACTCACTGGTGCTATCCTGCTTAACAAAATTAGTGGCTCAAAAATAGCCACAGAAAGCCTAAGAG-AAGAAAACAAGGA-TTTGAAAGTAGAAATGATGAATTTTGAATCTTCTGTTTTGTCTTAACAACT--AGAATTCTAAAATGATTTTA----TGGACATAAGAATGCTTTAAGAAATTCAATAGGCATT-TAGGGGTTTTATTTATCACTTTTATAAAGACTAAATTTCTAATAG----TATTCACTTTTTGCCACATAGATGC---ATTAGGGGAAACAGA---TTTTTTTCATTCCCAATAATTATTCCCAGTACTGTTACACTATTTGACATTACCAAAAATTTAAATAGGTTATTACTGAGATATATTGGCAACTGGAGCTGCC-AACATAAAAACTCTG------------------------------TTTTTGAATAATGGGGGCCT-GGGAGG----CCTGCTCAGCACTGCAGCTT----CTGTA----------ACCTCCTGACATGGACGGTGAC-------TCTG-GTCTCGCAGACCCC---AGGC----CTGTGAGGGTCGCTCACCGCGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1334855 583 + 114371477 CCTCCGCT-GGAACATG----------TGAGTCCTGTAGGGTCGATTCCTAGATCACCGTCTACTGAGACACATTCCTGTCAGCATGGACTCACTGGTGCTATCCTGCTTAACAAAATTAGTGGCTCAAAAATAGCCACAGAAAGCCTAAGAG-AAGAAAACAAGGA-TTTGAAAGTAGAAATGATGAATTTTGAATCTTCTGTTTTGTCTTAACAACT--AGAATTCTAAAATGATTTTA----TGGACATAAGAATGCTTTAAGAAATTCAATAGGCATT-TAGGGGTTTTATTTATCACTTTTATAAAGACTAAATTTCTAATAG----TATTCACTTTTTGCCACATAGATGC---ATTAGGGGAAACAGA---TTTTTTTCATTCCCAATAATTATTCCCAGTACTGTTACACTATTTGACATTACCAAAAATTTAAATAGGTTATTACTGAGATATATTGGCAACTGGAGCTGCC-AACATAAAAACTCTG------------------------------TTTTTGAATAATGGGGGCCT-GGGAGG----CCTGCTCAGCACTGCAGCTT----CTGTA----------ACCTCCTGACATGGACGGTGAC-------TCTG-GTCTCGCAGACCCC---AGGC----CTGTGAGGGTCGCTCACCGCGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1360683 584 + 1464242 CCTCCGCT-GGAACACG----------TGAGTCCTATAGGGTCGATTCCTAGATCACCGTCTACTGAGACACATTCCTGTCAGCATGGACTCACTGGTGCTATCCTGCTTAACAAAATTAGTGGCTCAAAAATAGCCACAGAAAGCCTAAGAG-AAGAAAACAAGGA-TTTGAAAGTAGAAATGATGAATTTTGAATCTTCTGTTTTGTCTTAACAACT--AGAATTCTAAAATCATTTTA----TGGACATAAGAATGCTTTAAGAAATTCAATAGGCATT-TAGGGGTTTTATTTATCACTTTTATAAAGACTAAATTTCTAATAG----TATTCACTTTTTGCCACATAGATGC---ATTAGGGGAAACAGA---TTTTTTTCATTCCCAATAATTATTCCCAGTACTGTTATACTATTTGACATTACCAAAAATTTAAATAGGTTATTACTGAGATATATTGGCAACTGGAGCTGCCAAACATAAAAACTCTG------------------------------TTTTTGAATAATGGGGGCCT-GGGAGG----CCTGCTCAGCACTGCAGCTT----CTGTA----------ACCTCCTGACATGGACGGCGAC-------TCTG-GTCTCGCAGACCCC---AGGC----CTGTGAGGGTCGCTCACTGCGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1085429 585 + 81552678 CCTCCGCT-GGAACGCG----------TGAGTCCTGTAGGGTCGATTCCTAGATCACCGTCTACTGAGACACATTCCTGTCAGCATGGACTCACTGGTGCTATCCTGCTTAACAAAATTAGTGGCTCAAAAATAGCCACAGAAAGCCTAAGAG-AAGAAAACAAAGA-TTTGAAAGTAGAAATGATGAATTTTGAATCTTCTGTTTTGTCTTAACAACT--GTAATGCTAAAATCATTTTA----TGGACATAAGAATGCTTTAAGAAATTCAATAGGCATT-TAGGAGTTTTATTTATCACTTTTATAAAGACTAAATTTCTAATAG----TATTCACTTTTTGCCACATAGACAC---GTTAGGGGAAACGGA---TTTTTTTCATTCCCAATAATTATTCCCAGGACTGTTATACTATTTGACATCACCAAAAATTTAAATAGGTTATTACTGAGATATTTTGGCAACTGGAGCTGCCAAACATAAAAACTCTG------------------------------TTTTTGAATAATCGGGGCCT-GGGAGG----CCCGCTCAGCACTGCAGCTT----CTGTG--------C-ACCTCCTGACATGGACGGCAAC-------CGTG-GCCTCCCAGACCCC---AGGC----CTGTGGGGGTCGCTCACTGTGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1416480 586 + 108979918 CCTCCGCT-GGAACATG----------TGGGTCCCGTAGGGTCAGTTCCTAGATCATCGTCTGCGGAGACACGTTCCCGCCAGCACAGACTCACTGGTGCTATCCTGCTTAACGAAATTAGTGGCTCAAAAATAGTCACAGAAAGCCTAAGAG-AAAAAAAACAGGA-TTTGAAAGTAGAAATGACGAATTTTGAATCTTCTGTTTTGTCTTAACAACT--ATAATTCTGAAATCATTTTA----TGGACATAAGAATGCTTCAAGAAATTCAGTAGGCATC-TAGGGGTTTTATTTATCACTTTTATAAAGGCTAGATTTCTAATAG----TATTCACTTTTTGCCAGATAGATAC---ATTAGGGGAAACAGA---TTTTTTTCATTCCCAATAATTATTCCCAGTAATGTTATACTATTTGACATTACCAAAAATTTAAATAGGTTGTTACTGAGATATTTTGGCAACTGGAGCTGCCAAACATAAAAATTCTG------------------------------TTTTTGAATAATCAGGGCCTGGGGAGG----CCTGCTCAGCACTGCAGCTT----CTGTG--------C-ACCTCCTGACATGAAGGGCGGC-------TCTG-GCCTCGCAGACCCC---AGGC----CTGTAAGGGTCGCTCACCGCCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1388861 586 - 111193037 CCTCCGCT-GGAACATG----------TGGGTCCCGTAGGGTCAATTCCTAGATCATCGTCTGTGGAGACACGTTCCCGCCAGCACAGACTCACTGGTGCTATCCTGCTTAACGAAATTAGTGGCTCAAAAATAGTCACAGAAAGCCTAAGAG-AAAAAAACCAGGA-TTTGAAAGTAGAAATGACGAATTTTGAATCTTCTGTTTTGTCTTAACAACT--ATAATTCTGAAATCATTTTA----TGGACATAAGAATGCTTCAAGAAATTCAGTAGGCATC-TAGGGGTTTTATTTATCACTTTTATAAAGGCTAGATTTCTAATAG----TATTCACTTTTTGCCAGATAGATAC---ATTAGGGGAAACAGA---TTTTTTTCATTCCCAATAATTATTCCCAGTAATGTTATACTATTTGACATTACCAAAAATTTAAATAGGTTGTTACTGAGATATTTTGGCAACTGGAGCTGCCAAACATAAAAATTCTG------------------------------TTTTTGAATAATCAGGGCCTGGGGAGG----CCTGCTCAGCACTGCAGCTT----CTGTG--------C-ACCTCCTGACATGAAGGGCGGC-------TCTG-GCCTCGCAGACCCC---AGGC----CTGTAAGGGTCGCTCACTGCCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1417332 586 + 3644372 CCTCCGCT-GGAACATA----------TGGGTCCCGTAGGGTCAATTCCTAGATCATCGTCTGCGGAGACACGTTCCCGCCAGCACAGACTCACTGGTGCTATCCTGCTTAACGAAATTAGTGGCTCAAAAATAGTCACAGAAAGCCTAAGAG-AAAAAAACCAGGA-TTTGAAAGTAGAAATGACGAATTTTGAATCTTCTGTTTTGTCTTAACAACT--ATAATTCTGAAATCATTTTA----TGGACATAAGAATGCTTCAAGAAATTCAATAGGCATC-TAGGGGTTTTATTTATCACTTTTATAAAGGCTAGATTTCTAATAG----TATTCACTTTTTGCCAGATAGATAC---ATTAGGGGAAACAGA---TTTTTTTCATTCCCAATAATTATTCCCAGTAATGTTATACTATTTGACATTACCAAAAATTTAAATAGGTTGTTACTGAGATATTTTGGCAACTGGAGCTGCCAAACATAAAAATTCTG------------------------------TTTTTGAATAATCAGGGCCTGGGGAGG----CCTGCTCAGCACTGCAGCTT----CTGTG--------C-ACCTCCTGACATGAAGGGCGGC-------TCTG-GCCTCGCAGACCCC---AGGC----CTGTAAGGGTCGCTCACCGCCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1370881 585 - 10304083 CCTCCGCT-GGAACATG----------TGGGTCCCGTAGGGTCAATTCCTAGATCATCGTCTACGGAGACACATTCCCGCCAGCACGGACTCACTGGTGCTATCCTGCTTAACGAAATTAGTGGCTCAAAAATAGTCACAGAAAGCCTAAGAG-AAAAAAACCAGGA-TTTGAAAGTAGAAATGACGAATTTTGAATCTTCTGCTTTGTCTTAACAACT--ATAATTCTGAAATCATTTTA----TGGACGTAAGAATGCTTTAAGAAATTAAATAGGCATC-TAGGGGTTTTATTTATCACTTTTATAAAGGCTAGATTTCTAATAG----TATTCACTTTTTGCCAGATAGATAC---ATTAGGGGAAACAGA---TTTTTTTCATTCCCAAAAATTATTCCCAGTAATGTTATACTATTTGACATTACCAAAAATTTAAATGGGTTGTTACTGAGATATTTTGGCAACTGGAGCTGCCAAACATAAAAACTCTG------------------------------TTTTTGAATAATCAGGGCCT-GGGAGG----CCTGCTCAGCACTGCAGCTT----CTGTG--------C-ACCTCCTGACATGAAGGGCGGC-------TCTG-GCCTCGCAGACCCC---AGGC----CTGTGAGGGTCACTCACCGCGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1446172 585 - 107702431 CCTCTGCT-GGAACATG----------TGGGTCCCGTAGGGTCGATTCCTAGATCATCGTCTACGGAGACACATTCCCGCCAGCACGGACTCACTGGTGCTATCCTGCTTAACAAAATTAGTGGCTCAAAAATAGTCACAGAAAGCCTAAGAG--AAAAAACCAGGA-TTTGAAAGTAGAAATGATGAATTTTGAATCTTCTGTTTTGTCTTAACAACT--ATAATTCTGAAATCATTTTA----TGGACATAAGAATGCTTTAAGAAATTCAATAGGCATT-TAGGGGTTTTATTGATCACTTTTATAAAGGCTAGATTTCTAATAG----TATTCACTTTTTGCCAGATAGATAC---ATTAGGGGAAACAGA---TTTTTTTCATTCCCAATAATTATTCCCAGTAATGTTATACTATTTGACATTACCAAAAATTTAAATAGGTTGTTACTGAGATATTTTGGCAACTGGAGCTGCCAAACATAAAAATTCTG------------------------------TTTTTGAATTATCAGGGCCTGGGGAGG----CCTGCTCAGCACTGCAGCTT----CTGTG--------C-ACCTCCTGACATGAAGGGTGAC-------TCTG-GCCTCGCAGACCCC---AGGT----CTGTGAGGGTCACTCACCGTGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 924582 585 - 2200435 CCTCCGCT-GGAACATG----------TGGGTCCCGTAGGGTCAATTCCTAGATCATCGTCTACGGAGACACATCCCCGCCAGCACGGACTCACTGGTGCTATCCTGCTTAACGAAATTAGTGGCTCAAAAATAGTCACAGAAAGCCTAAGAG-AAAAAAACCAGGA-TTTGAAAGTAGAAATGATGAATTTTGAATCTTCTGTTTTATCTTAACAACT--ATAATTCTGAAATCATTTTA----TGGACATAAGAATGCTTTAAGAAATTCAATAGGCATT-TAGGGGTTTTATTTGTCACTTTTATAAAGGCTAGATTTCTAATAG----TATTCACTTTTTGCCAGATAGATAC---ATTAGGGGAAACAGA---TTTTTTTCATTCCCAATAATTATTCCCAGTAATGTTATACTATTTGACATTACCAAAAATTTAAATAGGTTGTTACTGAGATATTTTGGCAACTGGAGCTGCCAAACATAAAAACTCTG------------------------------TTTTTGAATAATCAGGGCCT-GGGAGG----CCTGCTCAGCACTGCAGCTG----CTGTG--------C-ACCTCCTGACATGAAGGGCGGC-------TCTG-GCCTCGCAGACCCC---AGGC----CTGTGAGGGTCACTCCCCGCGG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1362741 571 - 108792865 CCTCGGCT-GGAACGCG----------TGCGTCCTGTACGGTGGGTTCACAGGTCATCGTCCCCTGAGACACATTCC--TCCACACGGGCTCACTGGTACTA-CCTGCTTAACAAAATTACCAGCTC-AAAGTAGCCACAGAACCCCCAAGAT-AAGAAAACAAGGG-TTTG-AAGTAGAAATGGTGGATTTTGAGTCTTCGGTTTTGTCTTAACAACT---TGATTCTGAAATCATTTTG----TGGACATAACAACGTTGTAAGAAAT-----AGGCGTT-TAGGGGTTTTATTTATCACTTTTTAAAAGGCTAAGTTTCTAATAG----TGTTCACTTTTTGCCACACGGATGT---ATTAGGGGAATCAGA---TGTTTTTCATTCCCAATCATTATTCCTAGTTAGTCGATACTGTGTGACATTAACAGACATTTAAATGGGCTGTTACTGAGACACTTTGGCAAGAGGAGCAGCC-AATGTAAAAACTCTG------------------------------CCTTTGAATCACCAGGGACT-GGGGGG----CCTGCTCAGTGTTGCAGCTT----CTGTG--------C-ATCTCCCGACACGGAC-GCGAC-------TCT--GCCCCACAGACCCC---AGGT----CTGTGAGAGCCGCCTGCCGCAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1212120 575 - 7082604 CCTCGGCTGGGAACACA----------GGGGTCCTGGAGGGCCGGTTCACAGGCCATCGTCCACTGAGACACCTTCC--TCCACACGGGCTCCCTGGTGCCA-CCCGCTTAACAAAATTACTGGCTC-AAAGTAGCCACAGAACTCCCAAGCT-AAGAAAACAAGGA-TTTG-AAGTAGAAATGGTGGATTTTGAATCTTCGGTTTTGTCTTAACAACT---TAATTCTGAAATCATTTTA----TGGACGTAAGGATGGCTTAAGGAATTCAACAGGCATT-TAGGGGT----TTTATCACTTTTTAAAAGGCTAAGTTTCTAACAG----TATTCACTTTTTGCCACATAGATAT---ATTAGGGGAAACAGA--TTTTTTTTCATTCCCAATAATCATTCCTGGTAAGTTGATACTATGTGACGTTACCAGGCATTTAAATAGGCTGTTACTGAGATGCTTTGGCAAGTGGAGCTGCCAAATGTAAGAACTCTG------------------------------CCTGTGAATCACCAGGGCCT---GGGG----CCTGCTCAGGGCCACGGCTT----CTGTG--------C-ACCTCCCGGCAGGGACGGCGGC-------TCTG-GCCTCGCAGACCCC---AGGT----CGGTGACAGCTGCCTGCCGCAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1300005 581 + 1864846 CCATGGCT-GGGACGCG----------CGGGTCCTGGAGGGCCAGTTCACAGGTCATCGTCCACTGAGACACGTTCC--TTCACGCGGGCTCACTGGTGCTA-CCTGCTTAGCAAGATTACTGGCTC-GAAGTAGCCACAGAAC-CCCAAGAT-AAGAAAACAAGGA-TTTG-AAGTAGAAATGGTGGATTTTGAATCTTCGGTTTTGTCTTAACAACT---TAATTTTGAAATCATTTTA----TGGACATAAGAATGTTTTAAGAAATTCAACAGGCATT-TAGGAGTTCTATTTATCACTTTTTAAAAGGCTAAGTTTCTAATAG----TATTCACTTTTTGCCTCATAGATAT---ATTAGGGGAAACAGATTTTTTTTTTCATTCCCAATAATTATTCCTAGTAAGTTGATACTGTGTGACGTTACCAGACATTTAAATAGGCTGTTACTGAGATACTTTGGCAAGTGGAGCTGCCAAATGTAAAAACTCTG------------------------------CCTGTGAATGACCAGGGCCT-AGGGGA----CCTGCTCAGTGCTGCGGCTT----CTGCG--------C-ACCTCCCGACAGGGACGGCGAC-------TCTG-GCCTCGCAGACCCC---ACGT----CTGTGAGAGCCGCCTGCCGCAG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 92828 560 + 287728 CCTCGGCT-GGAACGCG----------CGGGTCCTGTAGGGCCGGTTCACGGGTCAGCATCCACTGAGACACGTTCC--TCCACACGGGCTCACTGGTGCCG-CCTGATGAACAAAACTACGGGCTC-AAAGTAGCCACAGGACTCCTGAGAT-AAGAAAACAAGGA-TGTG-AAGTAGAAATGGTGCATTTTGAA------------TCTTAACAACT---TAATTCTGAAATCATTTTA----TGGACATAAGAATGTTTTAAGAAATTCGACAGGCATT-CAGGGGTTTTATTTATCACTTTTTAAAAGGCCAAGTTTCTAACAG----TATTCACATTTTGCCACGTAGATAT---ATC-----AAACAGA---TTTCTTTCATTCCCAACAATTATTCCTAGTAAGTTGACACTGTGTGACATTACCAGACATTCAAATCGGCTGTTACTGAGATACTTTGGCAAGTGAAGCTGCCAACTGTGAAAACTCTG------------------------------CCTTTGAATCACCAGGGCCT--GGGGG----CCGGCTCAGCGCCGCGGCTT----CTGCG--------C-CCCTCCCGACAGGG-CGGCGAC-------GCCG-GCCTCGCAGACCCC---GGGT----CTCTGAGAGCCGCCTGCCGCGG i aotNan1.NW_018513311v1 I 90 I 58 s otoGar3.GL873658 930539 561 + 5252280 ---------------TG----------TGGGT-------GGCCACTTCTCTGGTCACCG-ATGCTGGGACATGCCCCCGTCAGAACGTTCTTGGTAGCCCCACCCTGCTCAACAAAGTCAGGGGTCCAACAGTAGCTATGGAAGGTCTAAGATTAAGAAAACAAAGATTTTGTAAGTAGAAATGATTGATTTTGTATTTCCTACTCTGTCTT-ACTTCT--GTAATTCTGAAATCATTTTA----TAAGCAT-----------AAGAAATTCAATAGGCATG-TAGGGAT-TTAGTTATTGCTTTTATAAAGGCTAAATTCCTAATAT----TATTCATCTTCTGCCACACAGATACACTATTAGGAGAAATATA---TTTCTTTTATTCCCAACAAT-ATTACCAGTGATTTTACACTGCTTGACATTATCATAAATTAAAATAAGTTGTTACTGAGATAGTTCAGTGATGAGAGCTGTCAAATATGAAAAATCTG------------------------------TTCTTAAATAATTAGGACCC-TGGAGG----CCTGCCCAGCACCACGGCTT----GGGTG--------TGAGGCTCCGAGCTGGAAGGTGGCCAGGACTTTCA-GACCTGCAGACCCC---AAGC----TTGTAGAAGCAG-TCGCCACTG i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89996619 408 - 120129022 CTTCAGTT-----CAGG----------TGTGC----TAGGGC--ACCTACAGACCCATATTTACTATGATGTGTTCATCTCAGGATGTTCCT-------------------ACAAAGTCAAGGATTCAAGAAT-----CTCAATGTCCAAGACTAAGAAAACAAAAAGTTAGAAAGTGGATGTGATCCATTTTGGATCTT--GTTTCGTC------------------TGAAATCATGTCA----TTAAAATCCTCGTGCCATAAAAGAT---GCAGCCACTGCCAGGGACTTACTTA------TTATAAGTGCTGAATTCTTCATGTTAGCTATTCGCTT-----CACATAGATGT---GTTTGAAGAGAGAGA-----TTTCCCATTCTC--TAGTTACACC---------------------------------------------------------------------------------------------------------------------------TTTCTGATGAATTGGGGACC----AGG----TCTGTTTAGCACTACAGGTTGACAGTGTG----------TCTTCCTGGTTCTGAAGATGGT-------TC-A-GTATCCTAAA-----------------GTGACAGCCT---------- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1680498 556 + 4416731 TCTGAACT-CCAATGTGTATGGCCTGTTAAGTCATGTTAGGTCATTTCATTGATCATAGTTTATTGAAACATATTCCCACCAGAATATACACATTAGTACTACCATGGTTAA--AAATGAATGATTAGAAAATAACTACCGAGAGTCTTAGAA-AA-------AGAT-TTTTAAAGTAGAA----TCAATTTTTAATCCTTTACTTTGTCTTAACAACTCTGTAATTCTGAAATAATCTTACAAGTGGAAA-AAGAATGCTGCAAGAAATTCAATATTCATC-GAGGAGTTTTATTTAACACTTT---------------------------------------------------C------------------------------------------ACTCCCAGTAATTCAACACTATTTGGCAACACTATGGATTAAAATTGGTTGTTCCTGTGATATTTTGGTGACTATAGCTGCCAAATATGTAATTTCAGCTAAGTCAGACAAAATAGATGTCTCTATCATTTTCAGATAACTCAGACAT-AATAGATGTCTCTGTTTAACACCATTGCCTGA--TTGTGGATAACGat-ctttcttgattcagaggtcaat-------ccagaatcttccagacctctagaggcaaaattaggagaatcagtcacctctg i dasNov3.JH576208 C 0 C 0 e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=336007.000000 s hg38.chr2_KI270774v1_alt 97489 83 + 223625 TAGAGGCT-GCGTGGAGTCA-GTGGAGGGAGCCC---CTCAGC---------------AGGGAGACAAGGACAC----AGCGGTTCCCA--------TGG---CCTTGTCAGTGCTTG s panTro5.chr2A 110124224 83 - 111504155 TAGAGGCT-GCGTGGAGTCA-GTGGAGGGAGCCC---CTCAGC---------------AGGGAGACAAGGACAC----AGCGGTTCCCA--------TGG---CCTTGTCAGTGCTTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1335438 83 + 114371477 TAGAGGCT-GCGTGGAGTCA-GTGGAGGGAGCCC---CTCAGC---------------AGGGAGACAAGGACAC----AGCGGTTCCCA--------TGG---CCTTGTCAGTGCTTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1361267 83 + 1464242 TAGAGGCT-GCGTGGAGTCA-GTGGAGGGAGCCC---CTCAGC---------------AGGGAGACAAGGACAC----AGCGGTTCTCA--------TGG---CCTTGTCAGTGCTTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086014 83 + 81552678 TACAGGCT-GCGTGGAGTCA-GTGGTGGGAGCCC---CTCAGC---------------AGGGAGACAAGGACGC----AGCAGTTCTCA--------CGG---CCTTGTCAGTGCTTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417066 83 + 108979918 TACAGGCT-GTGTGGAGTCA-GCGGCGGGAGCCT---CTCAGC---------------AAGGAGACGCAGACAC----AGTGGTTCCCA--------TGG---CCTCATTGGTGCTTA i rheMac8.chr13 C 0 I 1 s macFas5.chr13 1389447 83 - 111193037 TACAGGCT-GTGTGGAGTCA-GCGGCGGGAGCCT---CTCAGC---------------AAGGAGACGCAGACAC----AGTGGTTCTCA--------TGG---CCTCATTGGTGCTTA i macFas5.chr13 C 0 I 1 s macNem1.NW_012011978v1 1417918 83 + 3644372 TACAGGCT-GTGTGGAGTCA-GCGGCGGGAGCCT---CTCAGC---------------AAGGAGACGCAGACAC----AGTGGTTCTCA--------TGG---CCTCATTGGTGCTTA i macNem1.NW_012011978v1 C 0 I 1 s cerAty1.NW_012000820v1 1371466 83 - 10304083 TAGAGGCT-GCGTGAAGTCA-GCGGCGGGAGCCT---CTCAGC---------------AAGGAGACGCGGACAC----AATGGTTCTCA--------TGG---CCTCATCGGTGCTTA i cerAty1.NW_012000820v1 C 0 I 1 s chlSab2.chr14 1446757 83 - 107702431 TAGAGATT-GCGTAGAGTCA-GCGGCAGGAGCCG---CTCAGC---------------AAGGAGAAGTGGACGC----AGTGGTTCTCA--------TGG---CCTCGTCAGTGCTTA i chlSab2.chr14 C 0 I 259 s manLeu1.NW_012103754v1 925167 83 - 2200435 TAGAGGCT-GCGTGGAGTCG-GCGGCGGGAGCCG---CTCAGC---------------AAGGAGACGCCGACAC----AGTGGTTCTCA--------TGG---CCTCATCGGTGCTTA i manLeu1.NW_012103754v1 C 0 I 1 s calJac3.chr14 1363312 53 - 108792865 TGGAGGCT-GCGTGAGTCTGCGGGG-----------------------------------------------------AGCGGTTCCCA--------CGG---CCTGGCCGCTGCTTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1212695 52 - 7082604 GGGAGGCC-GCGTGGAGTCG-GGGG-----------------------------------------------------AGCGGCTCCCA--------TGG---CCTTGCTGCTGCTTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1300586 52 + 1864846 TGGAGGCT-GCGTGGAGTCG-GGGG-----------------------------------------------------AGCGGTTCCCA--------CGG---CCTTGCCGCTGCTTG i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 931100 84 + 5252280 CAGAGGCT-G---GGGGCCA-GCTCACAGAGACCTCGCTAACC--------------TAAGGAGAGGCCGGGGC-----GCAGTTGCTG--------CGG--CCCCTGCCACTGCCTG i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89997027 72 - 120129022 ------------TGGACTTA-GGAGGA----------CCCACC---------------TGAGAGGCCTGGGTATTTATGGTACATCCCA--------CAGTACTCTGCTGACTATCTG i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1681054 106 + 4416731 tagtgaccagctaggagtca-gttgatagagatc---tctagctaacaaaatgcACATAAAAACAAACAAACAC----AGCACAGCACAGCAAAAACGAG---CTTTTCTTTTGCTG- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 93388 58 + 287728 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=54084.000000 s hg38.chr2_KI270774v1_alt 97572 8 + 223625 ATTACATA s panTro5.chr2A 110124307 8 - 111504155 ATTGCATA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1335521 8 + 114371477 ATTGCATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1361350 8 + 1464242 ATTGCATA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086097 8 + 81552678 ATTGCATA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417150 8 + 108979918 GTTGCATA i rheMac8.chr13 I 1 C 0 s macFas5.chr13 1389531 8 - 111193037 GTTGCATA i macFas5.chr13 I 1 C 0 s macNem1.NW_012011978v1 1418002 8 + 3644372 GTTGCATA i macNem1.NW_012011978v1 I 1 C 0 s cerAty1.NW_012000820v1 1371550 8 - 10304083 GTTGCATA i cerAty1.NW_012000820v1 I 1 C 0 s chlSab2.chr14 1447099 8 - 107702431 GTTGCATA i chlSab2.chr14 I 259 C 0 s manLeu1.NW_012103754v1 925251 8 - 2200435 GTTGCATA i manLeu1.NW_012103754v1 I 1 C 0 s calJac3.chr14 1363365 8 - 108792865 ACTGCACA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1212747 8 - 7082604 ACTGCACA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1300638 8 + 1864846 ACCGCACA i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 931184 8 + 5252280 TCTGCATG i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89997099 4 - 120129022 ATTA---- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1681160 8 + 4416731 TTTGCATG i dasNov3.JH576208 C 0 I 5 e aotNan1.NW_018513311v1 93388 58 + 287728 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=3755299.000000 s hg38.chr2_KI270774v1_alt 97580 372 + 223625 CTCTGTCTCCTTCCGTTAATTTTAGAATGAG---------AGCGCTGGCTGTGCTGTCTGTCACGCTGGTTATGGCCTGCACAGAAGCCTTCTTCCCCTTCATCTCGAGAGGGAAAGAACTCCTTTGGGGTAAGTAGCAAACACATTGCGGTCTTCTGGCCTTATAAAGTTATTT-TTCACACTTACTAAAATAGAGGGCATAATGGT--AGCTCCTGAGAGTCACTTTAGGCCCCTGTAGTGTATGCTTTGTTATGCTT-A----AG-AAAAAAAAATTGTAATTCTTGATTTTAGAAGGATTGAAATAT-------GTACATTTCTTTCTTTAAAAAAGAGCTGATTTTCCTTGGATGACACAATAGACAATTTTCACTTTTACCTATTCATATA s panTro5.chr2A 110124315 372 - 111504155 CTCTGTTTCCTTCCGTTAATTTTAGAATGAG---------AGCGCTCGCTGTGCTGTCTGTCACGCTGGTTATGGCCTGCACAGAAGCCTTCTTCCCCTTCATCTCAAGAGGGAAAGAGCTCCTTTGGGGTAAGTAGCAAACACATTGTGGTCTTCTGGCCTTATAAAGTTATTT-TTCACACTTACTAAAATAGAGGGCATAATGGT--AGCTCCTGAGAGTCAGTTTAGGCCCCTGTAGTGTATGCTTTGTTATGCTT-A----AG-AAAAAAAAATTGTAATTCTTGATTTTAGAAGGATTGAAATAC-------GTACATTTCTTTCTTTAAAAAAGAGCTGATTTTACTTGGATGACACAATAGACAATTTTCACTTTTACCTATTCATATA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1335529 372 + 114371477 CTCTGTTTCCTTCCGTTAATTTTAGAATGAG---------AGCGCTCGCTGTGCTGTCTGTCACGCTGGTTATGGCCTGCACAGAAGCCTTCTTCCCCTTCATCTCAAGAGGGAAAGAGCTCCTTTGGGGTAAGTAGCAAACACATTGTGGTCTTCTGGCCTTATAAAGTTATTT-TTCACACTTACTAAAATAGAGGGCATAATGGT--AGCTCCTGAGAGTCAGTTTAGGCCCCTGTAGTGTATGCTTTGTTATGCTT-A----AG-AAAAAAAAATTGTAATTCTTGATTTTAGAAGGATTGAAATAC-------GTACATTTCTTTCTTTAAAAAAGAGCTGATTTTCCTTGGATGACACAATAGACAATTTTCACTTTTACCTATTCATATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1361358 372 + 1464242 CTCTGTTTCCTTCCGTTAATTTTAGAATGAG---------AGCACTCGCTGTGCTGTCTGTCACGCTGGTTATGGCCTGCACAGAAGCCTTCTTCCCCTTCATCTCGAGAGGGAAAGAACTCCTTTGGGGTAAGTAGCAAACACATTGTGGTCTTCTGGCCTTATAAAGTTATTT-TTCACACTTACTAAAATAGAGGGCATAATGGT--AGCTCCTGAGAGTCAATTTAGGCCCCTGTAGTGTATGCTTTGTTATGCTT-A----AG-AAAAAAAAATTGTAATTCTTGATTTTAGAAGGATTGAAATAC-------GTACATTTCTTTCTTTAAAAAAGAGCTGATTTTCCTTGGATGACACAATAGACAATTTTCACTTTTACCTATTCATATA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086105 373 + 81552678 CTCTGTTTCCTTCCGTTAATTTTAGAATGAG---------AGCGCTCGCTGTCCTGTCTGTCACGCTAGTTATGGCCTGCACAGAAGCCTTCTTCCCTTTCATCTCGAGAGGGAAAGAACTCCTTTGGGGTAAGTAGCAAATGCATTGTGGTCTTCTGGCCTTATAAAGTTATTT-TTCACACTTACTAAAATAGAGGGCATAATGGT--AGCTCCTGAGAGTCCGTTTAGGCCCCTGTAGTGTAGGCTTTGTTATGCTT-A----AGAAAAAAAAAATTGTAATTCTTGATTTTAGAAGGATGGAAATAC-------GTACATTTCTTTCTTTAAAAAAGAGCTGGTTTTCCTTGGATGACACAATAGAAAATTTTCACTTTTACCTATTCATATA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417158 371 + 108979918 CTCTGTTTCCTTCCCTTAATTTTAGAATGAG---------AGCGTGGGCTGTCCTGGCTGTCACGCTGATTATGGCCTGCACAGAAGCCTTCTTCCCTTTCATCTCAAGAGGCAAAGAACTCCTTTGGGGTAAGTAGCAAATACATTGTGGTCTTCTGGCCTTATAAAGTTATTT-TTCACACTTACTAAAATAGAGGGCATGATGGT--AGCTCCCGAGAGTCAGTTTAGGCCCCTGTAGCGTATGCTTTGTTATACTT-A-------GAAAAAAAATTGTAATTCTTGATTTTAGAAGGATTAAAATAC------TGTACATTTCTTTCTTTTAAAAAGAGCTGATTTTCCTTGGATAACACAATAGAAAATTTTCACTTTTACCTATTCATATA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1389539 371 - 111193037 CTCTGTTTCCTTCCCTTAATTTTAGAATGAG---------AGCGTGGGCTGTCCTGGCTGTCACGCTGATTATGGCCTGCACAGAAGCCTTCTTCCCTTTCATCTCAAGAGGCAAAGAACTCCTTTGGGGTAAGTAGCAAATACATTGTGGTCTTCTGGCCTTATAAAGTTATTT-TTCACACTTACTAAAATAGAGGGCATGATGGT--AGCTCCCGAGAGTCAGTTTAGGCCCCTGTAGCGTATGCTTTGTTATACTT-A-------GAAAAAAAATTGTAATTCTTGATTTTAGAAGGATTAAAATAC------TGTACATTTCTTTCTTTTAAAAAGAGCTGATTTTCCTTGGATAACACAATAGAAAATTTTCACTTTTACCTATTCATATA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418010 371 + 3644372 CTCTGTTTCCTTCCCTTAATTTTAGAATGAG---------AGCGTGGGCTGTCCTGGCTGTCACGCTGATTGTGGCCTGCACAGAGGCCTTCTTCCCTTTCATCTCAAGAGGCAAAGAACTCCTTTGGGGTAAGTAGCAAACACATTGTGGTCTTCTGGCCTTATAAAGTTATTT-TTCACACTTACTAAAATAGAGGGCATGATGGT--AGCTCCCGAGAGTCAGTTTAGGCCCCTGTAGCGTATGCTTTGTTATACTT-A-------GAAAAAAAATTGTAATTCTTGATTTTAGAAGGATTAAAATAC------TGTACATTTCTTTCTTTTAAAAAGAGCTGATTTTCCTTGGATAACACAATAGAAAATTTTCACTTTTACCTATTCATATA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1371558 371 - 10304083 CTCTGTTTCCTTCCCTTAATTTTAGAATGAG---------AGCGCGGGCTGTCCTGGCTGTCACGCTGATTATGGCCTGCACAGAAGCCTTCTTCCCTTTCATCTCAAGAGGCAAAGAACTCCTTTGGGGTAAGTAGCAAATACATTGTGGTCTTCTGGCCTTATAAAGTTGTTT-TTCACACTTACTGAAATAGAGGGCATGACGGT--AGCTCCCGAGAGTCAGTTTAGGCCCCTGTAGTGTATGCTTTGTTATGCTT-A-------GAAAAAACATTGTAATTCTTGATTTTAGAAGGATTAAAATAC------TGTACATTTCTTTCTTTTAAAAAGAGCTGATTTTCCTTGGATAACACAGTAGAAAATTTTCACTTTTACCTATTCATATA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447107 372 - 107702431 CTCTGTTTCCTTCCGTTAATTTTAGAATGAG---------AGCGCTGGCTGTCCTGGCTGTCACGCTGATTATGGCCTGCACAGAAGCCTTCTTCCCTTTCATCTCAAGAGGCAAAGAACTCCTTTGGGGTAAGTAGCAAATACATTGTGGTCTTCTGGCCTTATAAAGTTATTT-TTCACACTTACTAAAATAGAGGGCATAATGGT--AGCTCCCGAGAGTCAGTTTAGGCCCCTGTAGTGTATGCTTTGTTATGCTTAA-------GAAACAAAATTGTAATTCTTGATTTTAGAAGGATTAAAATAC------TGTACATTTCTTTCTTTTAAAAAGAGCTGATTTTCCTTGGATAACACAATAGAAAATTTTCACTTTTACCTATTCATATA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 925259 371 - 2200435 CTCTGTTTCCTTCCCTTAATTTTAGAATGAG---------AGCGCGGGCTGTCCTGGCTGTCACGCTGATTATGGCCTGCACAGAAGCCTTCTTCCCTTTCATCTCAAGAGGCAAAGAACTCCTTTGGGGTAAGTAGCAAATACATTGTGGTCTTCTGGCCTTATAAAGTTATTT-TTCACACTTACTGAAATAGAGGGCATGACGGT--AGCTCCCGAGAGTCAGTTTAGGCCCCTGTAGTGTATGCTTTGTTACGCTT-A-------GAAAAAACATTGTAATTCTTGATTTTAGAAGGATTAAAATAC------TGTACATTTCTTTCTGTTAAAAAGAGCTGATTTTCCTTGGATAACACAATAGAAAATGTTCACTTTTACCTATTCATATA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1363373 370 - 108792865 CTCTGTTTCCTTCCATTAATTTTAGAATGAG---------AACACTCGCTGTCCTGGCTGCCACGCTGGTTATGGCCTGCACGGAAGCCTTCTTCCCTTTCATCTCGAGAGGCAAGGAACTCGTCTGGGGTAAGCAGCAAGCACGTTGTGGTCTTCTGGCCTCATAAAGTTACTT-TTCTCACTCACCAAAATAGAGGGTGTAATGGT--AGCTCTTGAGGGTCAGTTTAGGCCGCTGTAGCCTATGTTTTGTTATGCTT-C-------AGAAAAGGATTGTAATTCTTGATTTTAGAA-GATTAAAATAC------TGTACGTTTCTTTCTTTAAAAAGGAACTGATTTTCCTTGGATGACACAAGAGGAAATTTTCACTTTTACCTATTCATATA i calJac3.chr14 C 0 I 4 s saiBol1.JH378218 1212755 368 - 7082604 CTCCGCTTCCTTCCGTTAATTTTAGAATGAG---------AACGCTCGCTGTCCTGGCAGCCACGCTGGTTCTGGCCTGCACGGAAGCCTTCTTCCCTTTCATCTCGAGAGGCAAAGAGCTCCTTTGGGGTAAGCAGTGAACGCATGGTGGTCTTCTGGCCTCATAAATTTACTT-TTCTCACTTATCAAAATAGAGGGCGTAATGGT--AGCTCTTGAGGGTCAGTTCAGGCCCCTGTAGTGTATGTTTTGTTATGCTT-C-------AGAAAAGAATTGTAATTCTTGATTTTAGAA-GATTAAAATAC------TGGACATTTCTTTCTTTAAAAACGAACTGGTTTTCCTTGGGTG--ACAATAGAAAATTTTCACTTTTACCTATTCatata i saiBol1.JH378218 C 0 I 9 s cebCap1.NW_016107827v1 1300646 370 + 1864846 CTCTGTTTCCTTCTGTTAATTTTAGAATGAG---------AACACTCGCTGTCCTGGCTGCCACGCTGGTTCTGGCCTGCACGGAAGCCTTCTTCCCGTTCATCTGGAGAGGCAAAGAACTCCTTTGGGGTAAGCAGCAAATACGTTGTGGTCTTCTGGCCTTATAGAGTTACTT-TTCTCACTTACCGAAATAGAGGGCATAATGGC--AGCTCTTGAGGGTCAGTTTAGGCCCCTGTGGCATATGTTTTGTTATGCTT-C-------AGAAAAGAATTGTAATTCCTGATTTTAGAA-GATGAAAATAC------TGTACATTTCTTTCTTTAAAAAGGAACTGATTTTCCTGGGATGACACAGTAGAAAATTTTGACTTTTACCTATTCATATA i cebCap1.NW_016107827v1 C 0 I 4 s aotNan1.NW_018513311v1 93446 369 + 287728 CTCTGTTTCCCTCCGGTAACTGCAGAATGAG---------AGCACTCGCTGTCCTGGCTGCCGCGCTCGCCATGGCCTGCACGGACGCCTTCTTCCCTTTCATCTCGAGAGGCAAAGAACTCCTCTGGGGTAAGCAGCTAACACGTTGTGGTCTTCGGGCCTCATACAGTTACTT-TTCTCACTTACCAAAATAGAGGGCGTAACGGT--AGCTCTTGAGGGTCAGTGTAGGCCCCTGCAGCGTATG-TTTGTTATGCTT-C-------AGAAAAGAATTGTAATTCTTGACTTTAGAA-GTTTAAAATAC------TGTACATTTCCTTCTTTAAAAAGGAACTGATTTTCCTTGGATGACACAATAGAAAATTTTCACTTTTACCTATTCATATC i aotNan1.NW_018513311v1 I 58 I 3 s otoGar3.GL873658 931192 373 + 5252280 --CTGTCTCTCTGT-TTCATTTTAGGATGAG---------AATGGTTGTAGTCCTGGCTGGCACCCTGGTCATAATCGGCGCCCACCTTTTCTTCACTTTCATCTTAAGAGACAAAGAACTCCTTTGGGGTACGTAGCAAATAAATC-TGTTTTTTTGGCTTCATAAAGTTCTTTCTTCAAAATTATAAAAATAAGGAGCATAATGGT--AGTTTTGGGGAGTCAATTAAGACC-CTATAGTGTATGTTTTGTTACACTC-C----AT-GAGGAAAAGTTGTAATTCTTAAGTTTAGAAGGATTAAAATACTGATACTGTACAGTTCTTTC--TGAAAGAGAACTGATTTTCCTGTGGTTACACAATAGAAAATTTCCATTGATCTCTGCTCatata i otoGar3.GL873658 C 0 I 2 s mm10.chr12 89997103 350 - 120129022 -TCTCTTCCACCACTTCAGCTCTAGAATGAG---------AACACTTGGAGCTATGGCAATAATGCTGGTGGTTATGGGAACTGTAATTTTCCTCTCTTTTATCCTGAGAAGCAGAGACATCTTGTGTGGTAAGTAACAAATGATGTGGGATCTTTTAGTCTTGTAAAGTTGTTT-TTCACACTCAACAAACCAAA---CATGTCAGTGCGGTTGCTGAGGATCAGTTAAAGACCCTTTTGTGCTTG-----------TC-A-------AAAAGAATAATGTAATTCTTCAGTTTAGAAGGATTAAATTAT-----------AATTCCTCCTTT--AAAAGAACTGATTTTTCCATTATTATAGAATAAATCATTTCCA-TTTTATCTGTACATATA i mm10.chr12 C 0 I 3 s dasNov3.JH576208 1681173 376 + 4416731 TTTTGTTTATTTCTTTTAATTTTAGAATGAGAGCACTTGTAGCACTCGTAGTATTGGGAATGACAATGATTTGGGCCTATAGTGGAGTTTTCTTCCCTTTCATCTTGAGAGGCAAAGACATCTTTTGGGGTAAGTAATAAAGAAAATTTGATCTTTTGAACTTATAAGATTATTT-TTCACACATACCAAAACATAAAGCATTATGGT--ACTGCTTGAGAGTCAGGTAAGATCCCTTTAGTATATGTTTTGTTATACTT-TTCTAAT-GAAAAAAAA---TAATTCTTGAGCTTTGAAGGATTGCCATAC-----------AATTCTTTCTGTAAAAA--ATCTGAAGTTTCTATTATTTTACCATTAGAAATTTCCACTTTCACCTGCTCATATA i dasNov3.JH576208 I 5 C 0 e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=-4069.000000 s hg38.chr2_KI270774v1_alt 97952 8 + 223625 ACTG-----AAAA s panTro5.chr2A 110124687 8 - 111504155 TTTG-----AAAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1335901 8 + 114371477 TTTG-----AAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1361730 9 + 1464242 ATTG---A-AAAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086478 9 + 81552678 TTTG---A-AAAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417529 9 + 108979918 TTTG---A-AAAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1389910 9 - 111193037 TTTG---A-AAAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418381 9 + 3644372 TTTG---G-AAAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1371929 9 - 10304083 TTTG---A-AAAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447479 12 - 107702431 TTTGAAAA-AAAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 925630 9 - 2200435 TTTG---A-AAAA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1363747 5 - 108792865 TTTG---A----- i calJac3.chr14 I 4 C 0 s cebCap1.NW_016107827v1 1301020 5 + 1864846 TTTA---A----- i cebCap1.NW_016107827v1 I 4 C 0 s aotNan1.NW_018513311v1 93818 6 + 287728 TTTA---AA---- i aotNan1.NW_018513311v1 I 3 C 0 s otoGar3.GL873658 931567 8 + 5252280 tttt---a-aaa- i otoGar3.GL873658 I 2 C 0 s mm10.chr12 89997456 5 - 120129022 TTTA---A----- i mm10.chr12 I 3 C 0 s dasNov3.JH576208 1681549 7 + 4416731 TTTG---A-CA-- i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1213123 9 - 7082604 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=1541662.000000 s hg38.chr2_KI270774v1_alt 97960 158 + 223625 AAAAATTCTTTGGGAGT--GTTTTTCTTCCTTTGCTACAGAATTATTTTTTATTAAATAACTTCTGTGATGTATTTTCTGGAATCAGTGTGCTACTATGTGAAAACAAGTTAAGAAAGCTACTGAGATGCAGTGGTTAAA--ATAATCACAGATCAAGCTCT s panTro5.chr2A 110124695 158 - 111504155 AAAAATTCTTTGGGAGT--GTTTTTCTTCCTTTGCTACAGAATTATTTTTTATTAAATAACTTCTGTGATGTATTTTCTGGAATCAGTGTGCTACTATGTGAAAACAAGTTAAGAAAGCTACTGAGAGGCAGGGGTTAAA--ATAATCACAGATCAAACTCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1335909 158 + 114371477 AAAAATTCTTTGGGAGT--GTTTTTCTTCCTTTGCTACAGAATTATTTTTTATTAAATAACTTCTGTGATGTATTTTCTGGAATCAGTGTGCTACTATGTGAAAACAAGTTAAGAAAGCTACTGAGAGGCAGGGGTTAAA--ATAATCACAGATCAAACTCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1361739 158 + 1464242 AAAAATTCTTTGGGAGT--GTTTTTCTTCCTTTGCTACAGAATTATTTTTTATTAAATAACTTCTTTGATGTATTTTCTGGAATCAGTGTGCTACTATGTGAAAACAAGTTAAGAAAGCTACTGAGATGCAGTGGTTAAA--ATAATCACAGATCAAACTCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086487 153 + 81552678 AAAATTTCTTTGGGAGT--GTTTTTCTTCCTTTGCTATAGAATTATTTTTTGTTAAATAACTTCTGTAATGTATGTTCTAGAATCAGTGTGCTACTATGTGAAAAC-----AAGAAAGCTACTGAGATGCAGTGGTTAAA--ATAGTCACAGATCAAACTCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417538 158 + 108979918 AAAATTTCTTTGGGAGT--GTTTTTCTTCCTTTGCTACAGAATCATTTTTTCTTAAATAACTTCTGTGATGTATTTTCTGGAATCAGTGTGCTACTATATGAAAACAAGTTAAGAAAGCTACTGAGATGCAGTGGTTAAA--ATAATCACAGATCAAACTCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1389919 158 - 111193037 AAAATTTCTTTGGGAGT--GTTTTTCTTCCTTTGCTACAGAATCATTTTTTCTTAAATAACTTCTGTGATGTATTTTCTGGAATCAGTGTGCTACTATGTGAAAACAAGTTAAGAAAGCTACTGAGATGCAGTGGTTAAA--ATAATCACAGATCAAACTCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418390 158 + 3644372 AAAATTTCTTTGGGAGT--GTTTTTCTTCCTTTGCTACAGAATCATTTTTTCTTAAATAACTTCTGTGATGTATTTTCTGGAATCAGTGTGCTACTATATGAAAACAAGTTAAGAAAGCTACTGAGATGCAGTGGTTAAA--ATAATCACAGATCAAACTCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1371938 158 - 10304083 GAAATTTCTTTGGGAGT--GTTTTTCTTCCTTTGCTACAGAATCATTTTTTCTCAAATAACTTCTGTGATGTGTTTTCTGGAATCAGTGTGCTGCTATGTGAAAACAAGTTAAGAAAGTTACTGAGATGCAGTGGTTAAA--ATCATCACAGATCAAACTCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447491 158 - 107702431 AAAATTTCTTTGGGAGT--GTTTTTCTTCCTTTGCTACAGAATTATTTTTTCTTAAATAACTTCTGTGATGTATTTTCTGGAATCAGTGTGCTACTATGTGAAAACAAGTTAAGAAAGTTACTGAGATGCAGTGGTTAAA--ATAATCACAGATCAAACTCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 925639 158 - 2200435 AAAATTTCTTTGGGAGT--GTTTTTCTTCCTTTGCTACAGAATCATTTTTTCTTAAATAACTTCTGTGATGTATTTTCTGGAATCAGTGTGCTGCTATGTGAAAACAAGTTAAGAAAGCTACTGAGATGCAGTGGTTAAA--ATCATCACAGATCAAACTCT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1363752 156 - 108792865 AAAATTTCTTTGGGAGT--GTCTTTCTTCTTCTGCTACAAAATTCGTTTTTATTAAATAACTTTTGAG-TTTGTTTTCTGGACTCAGGC-GCTACAATGTGAAAACAGGTTCAGAAAGCTGCTAAGATGCAGTGGTTAAA--ATAATCACAGATCAAACTCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213132 158 - 7082604 aaaaattCCTTGGGAGT--GTTTTTCTTCTGCTGCTACAAAATTAGTTTTCATTAAATAACTTTTGAGATATATTTTCTGGAATGAGTCTGCTCCAATGTGAAAACAGGTTAAGAAAGCTGCTAAGATGGAGTGGTTAAA--ATAGTCACAGATCAAACTCT i saiBol1.JH378218 I 9 C 0 s cebCap1.NW_016107827v1 1301025 152 + 1864846 AAAATTTCTTTGGGAGT--GTTTTTCTTCTGCTGCTACAAAATTAGTTTTTGTTAAATAACTTTTGAGATATATTTTC------CAGTCTGCTACAATGTGAAAACAGGTTAAGAAAGCTGCTAAGATGCAGTGGTTAAA--ATAATCACAGATCAAACTCT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 93824 158 + 287728 AAAATTTCTTTGGGAGT--GTTTTTCTTCTTCTGCTACGAAATTAGTTTTTATTAAACAACTTTTGGGATATGTTTTCTGGAATCAGTCTGGTACAGCGTGAAAACAGGCTAAGAAAGCCGCTAAGGTGCAGTGGTTAAA--ATAATCACAGATCAAACTCT i aotNan1.NW_018513311v1 C 0 I 132 s otoGar3.GL873658 931575 140 + 5252280 aatatttCTTGTGGAGT--ATTTTTCTTTC----CTACAAAATCATTTTTTATTAAATAAC--------------TTCTGGAATCAGTGTGCTACAGTGTGAAATCAGATTAAGAAAACTATGGAGATACAGTGGTTAAA--ATAATCAGGTATCAAACTCT i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89997461 135 - 120129022 AAGG-----TTGTGACA--ATTTTTGTTTCTTTGTTAGAAAATCATCTCAAGTTAAATA---TCTCTGGTATAGCT--AGGTTTTGGTTGAGTTGTATGGGAAATTATAGTAAGAAAGCTACTGAAATATATGGATTAAC--ATAATCA------------- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1681556 160 + 4416731 AACATTTCTTTGGGAATAAGTGAGTGTTCCTAAGCTACAAAATTATTTTCTGTTAAATAAC--CTGGGATCTATTTTCTGCAATCAGGATGCTACAATGCCAAATTGGTTTAAGAAAACTACAGGGATGGGGTCCTTAAAATATAATCACAGGTCCAAATGT i dasNov3.JH576208 C 0 C 0 e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=59343.000000 s hg38.chr2_KI270774v1_alt 98118 6 + 223625 TTGCTT s panTro5.chr2A 110124853 6 - 111504155 TTGCTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336067 6 + 114371477 TTGCTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1361897 6 + 1464242 TTGCTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086640 6 + 81552678 TTGCTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417696 6 + 108979918 TTGCTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390077 6 - 111193037 TTGCTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418548 6 + 3644372 TTGCTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372096 6 - 10304083 TTGCTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447649 6 - 107702431 TTGCTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 925797 6 - 2200435 TTGCTT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1363908 6 - 108792865 TGGCTT i calJac3.chr14 C 0 I 3 s saiBol1.JH378218 1213290 6 - 7082604 TTGCTT i saiBol1.JH378218 C 0 I 3 s cebCap1.NW_016107827v1 1301177 6 + 1864846 TTGCTT i cebCap1.NW_016107827v1 C 0 I 44 s otoGar3.GL873658 931715 6 + 5252280 TCGCTT i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89997596 5 - 120129022 -TTCTT i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1681716 6 + 4416731 TTGGGT i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=123415.000000 s hg38.chr2_KI270774v1_alt 98124 23 + 223625 TTCTTTTAATAAAAT--------------AAATAA----AG s panTro5.chr2A 110124859 23 - 111504155 TTCTTTTGATAAAAT--------------AAATAA----AG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336073 23 + 114371477 TTCTTTTGATAAAAT--------------AAATAA----AG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1361903 23 + 1464242 TTCTTTTGATAAAGT--------------AAATAA----AG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086646 23 + 81552678 TTCTTTTGATAAAAT--------------AAATAA----AG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417702 23 + 108979918 TTCTTTTGATAAAAT--------------AAATGA----AG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390083 23 - 111193037 TTCTTTTGATAAAAT--------------AAATGA----AG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418554 23 + 3644372 TTCTTTTGATAAAAT--------------AAATGA----AG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372102 23 - 10304083 TTCTTTTGATAAAAT--------------AAATGA----AG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447655 23 - 107702431 TTCTTTTGATAAAAT--------------AAATGA----AG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 925803 23 - 2200435 TTCTTTTGATAAAAT--------------AAATGA----AG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1363917 37 - 108792865 CTAAATAAATAAACTCTTCACTTTTGCCAAAATGA----AG i calJac3.chr14 I 3 C 0 s saiBol1.JH378218 1213299 37 - 7082604 CTAAATAAATAAACTCTTCACCTTTGCCAAAATGA----AG i saiBol1.JH378218 I 3 C 0 s otoGar3.GL873658 931721 27 + 5252280 TTCTTTTGCTAACAT--------------AAATTAATTGAA i otoGar3.GL873658 C 0 C 0 s mm10.chr12 89997601 23 - 120129022 TGCTATAAAgaagaa--------------aaacaa----ag i mm10.chr12 C 0 I 195 s dasNov3.JH576208 1681722 21 + 4416731 TGTGTTTTGTAAAAT----------------TCAA----AG i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e cebCap1.NW_016107827v1 1301183 44 + 1864846 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=27337.000000 s hg38.chr2_KI270774v1_alt 98147 5 + 223625 TTCCA s panTro5.chr2A 110124882 5 - 111504155 TTCCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336096 5 + 114371477 TTCCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1361926 5 + 1464242 TTCCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086669 5 + 81552678 TCCCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417725 5 + 108979918 TCCCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390106 5 - 111193037 TCCCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418577 5 + 3644372 TCCCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372125 5 - 10304083 TCCCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447678 5 - 107702431 TCCAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 925826 5 - 2200435 TCCCA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1363954 4 - 108792865 TCCC- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213336 4 - 7082604 TCCC- i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 931748 5 + 5252280 TTCCA i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1681743 5 + 4416731 TCCCA i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301183 44 + 1864846 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=218611.000000 s hg38.chr2_KI270774v1_alt 98152 26 + 223625 AACCCTGAGAACAAGTTTCACTGGAG s panTro5.chr2A 110124887 26 - 111504155 AACCCTGAGAACAAGTCTCACTGGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336101 26 + 114371477 AACCCTGAGAACAAGTCTCACTGGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1361931 25 + 1464242 AACCCTG-GAACAAGTTTCACTGGAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086674 26 + 81552678 AACCCTGAGAACAAGTTTCACTGGAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417730 26 + 108979918 AACCCTGAGAACAGGTTTCACTGGAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390111 26 - 111193037 AACCCTGAGAACAGGTTTCACTGGAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418582 26 + 3644372 AACCCTGAGAACAGGTTTCACTGGAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372130 26 - 10304083 AACCCTGAGAACAGGTTTCACTGGAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447683 26 - 107702431 AACCCTGGGAACAGGTTTCACCAGAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 925831 26 - 2200435 AACCCTGAGAACAGGTTTCACTGGAG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1363958 26 - 108792865 AACCCTGAGAACACCTTTCACTGGAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213340 26 - 7082604 AACCCTGAGAACACTTTTCACCGGAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1301227 26 + 1864846 AACCCTGAGAACACGTTTCACTGGAG i cebCap1.NW_016107827v1 I 44 I 57 s otoGar3.GL873658 931753 25 + 5252280 AACCCTCAGAA-AAGTCTCACAGATG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1681748 26 + 4416731 AACAGTGAGAACAAGTTTTACTCCTG i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=345943.000000 s hg38.chr2_KI270774v1_alt 98178 52 + 223625 -TGAATACTGCAGGGGCATTTGCCTGGACATT-TTA-CCCCATGGACACC--GCTGG- s panTro5.chr2A 110124913 52 - 111504155 -TGAACACTGCAGGGGCATTTGCCTGGACATT-TCA-CCCCATGGACACC--GCTGG- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336127 52 + 114371477 -TGAACACTGCAGGGGCATTTGCCTGGACATT-TCA-CCCCATGGACACC--GCTGG- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1361956 52 + 1464242 -CGAACACTGCAGGGGCATTTGCCTGGACATT-TCA-CCCCATGGACACC--GCTGG- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086700 52 + 81552678 -CAAACACTGCAGGGGTGTTTGCCTGGACATT-TCA-CCCCATGGACACC--GCTGG- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417756 52 + 108979918 -CGAACACTGCAGGGGCGTTTGCCTGGACATT-TCA-CCCCACAGACACT--CCTGG- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390137 52 - 111193037 -CGAACACTGCAGGGGCGTTTGCCTGGACATT-TCA-CCCCACAGACACT--CCTGG- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418608 52 + 3644372 -CGAACACTGCAGGGGCGTTTGCCTGGACATT-TCA-CCCCACAGACACT--CCTGG- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372156 52 - 10304083 -CGAACACTGCAGGGGCGTTTGCCCGGACATT-TCA-TCCCATAGACACT--CCTGG- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447709 52 - 107702431 -CGAACACTGCAGGGGCGTTTGCCTGGACATT-TCA-CCCCACGGACACT--GCTGG- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 925857 52 - 2200435 -CGAACACTGCAGGGGCGTTTGCCTGGACATT-TCA-CCCCACAGACACT--CCTGG- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1363984 53 - 108792865 -CAAAGCCCGTGGGGGCGTCTGCCTGGACATTCCCA-CCCCACAGACACC--ACTGG- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213366 53 - 7082604 -CGAAGCCTGCGGGGGCGTCTGTCTGGACGTTCCCA-CCCCACAGACACC--GCTGG- i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 931778 54 + 5252280 -CCAATGGTG-AGGGGCATTTGCCTAGAAACT-TCAGCCCTATGGACACCCTCTTGG- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1681774 55 + 4416731 CAGGAAGCTGTAGGGGCATTTGCCTAGGAATT-TCAACCTTGTGGATCCT--CGTTAG i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=7800.000000 s hg38.chr2_KI270774v1_alt 98230 1 + 223625 C s panTro5.chr2A 110124965 1 - 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336179 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362008 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086752 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417808 1 + 108979918 C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390189 1 - 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418660 1 + 3644372 C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372208 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447761 1 - 107702431 C i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 925909 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 C 0 s otoGar3.GL873658 931832 1 + 5252280 C i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1681829 1 + 4416731 C i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e saiBol1.JH378218 1213419 0 - 7082604 C e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e calJac3.chr14 1364037 0 - 108792865 C e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=103040.000000 s hg38.chr2_KI270774v1_alt 98231 18 + 223625 --CCCGGGAGCAGGTGACAC s panTro5.chr2A 110124966 18 - 111504155 --CCCGGGAGCAGATGACAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336180 18 + 114371477 --CCCGGGAGCAGGTGACAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362009 18 + 1464242 --CCCAGGAGCAGGTGACAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086753 18 + 81552678 --CCCAGAAGCAGGTGACAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417809 18 + 108979918 --CCCGCGAGCGGGTGACAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390190 18 - 111193037 --CCCGCGAGCGGGTGACAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418661 18 + 3644372 --CCCGCGAGCGGGTGACAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372209 18 - 10304083 --CCCGCGAGCCGGTGACAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447762 18 - 107702431 --CCTGGGAGCAGGTGACAC i chlSab2.chr14 C 0 T 14 s manLeu1.NW_012103754v1 925910 18 - 2200435 --CCCGCGAGCGGGTGACAC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364037 18 - 108792865 --CCCAGGAGCAGGTGACTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213419 18 - 7082604 --CCCAGGAGCAGGTGACTC i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 931833 17 + 5252280 ---CCTGGGACAGTTGTCAC i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1681830 19 + 4416731 CTTCTGGAAGGGTTTAACC- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=101357.000000 s hg38.chr2_KI270774v1_alt 98249 16 + 223625 CTCGCTGGGCAGGTCC s panTro5.chr2A 110124984 16 - 111504155 CTCGCTGGGCAGGTCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336198 16 + 114371477 CTCGCTGGGCAGGTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362027 16 + 1464242 CTCACTGGGCAGGTCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086771 16 + 81552678 CTCGCTGGTCAGATCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417827 16 + 108979918 CTCACTGGGCAGGTCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390208 16 - 111193037 CTCACTGGGCAGGTCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418679 16 + 3644372 CTCACTGGGCAGGTCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372227 16 - 10304083 CTCACTGGGCAGGTCC i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 925928 16 - 2200435 CTCACTGGGCAGGTCC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364055 16 - 108792865 CTCACTGGGCAGGTCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213437 16 - 7082604 CTCGCCGGGCAGGTGC i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 931850 16 + 5252280 CTACCTGAGTGTCACC i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1681849 16 + 4416731 CTCCCTCAGCAGGCCC i dasNov3.JH576208 C 0 I 61 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M e chlSab2.chr14 1447780 14 - 107702431 T a score=38178.000000 s hg38.chr2_KI270774v1_alt 98265 6 + 223625 CTGGGC s panTro5.chr2A 110125000 6 - 111504155 CTGGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336214 6 + 114371477 CTGGGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362043 6 + 1464242 CTGGGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086787 6 + 81552678 CTGGGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417843 6 + 108979918 CTGGGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390224 6 - 111193037 CTGGGC i macFas5.chr13 C 0 T 43 s macNem1.NW_012011978v1 1418695 6 + 3644372 CTGGGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372243 6 - 10304083 CTGGGC i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 925944 6 - 2200435 CTGGGC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364071 6 - 108792865 CTGGGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213453 6 - 7082604 CTGGGC i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 931866 4 + 5252280 CTGG-- i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M e chlSab2.chr14 1447780 14 - 107702431 T a score=75923.000000 s hg38.chr2_KI270774v1_alt 98271 18 + 223625 CTCTGCACACAGTCCCGG s panTro5.chr2A 110125006 18 - 111504155 CTCTGGACACAGTCCTGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336220 18 + 114371477 CTCTGGACACAGTCCTGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362049 18 + 1464242 CTCTGGACACAGTCCTGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086793 18 + 81552678 CTCTGGACACAGTCCCAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417849 18 + 108979918 CTCTGGACACAGTCCTGA i rheMac8.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418701 18 + 3644372 CTCTGGACACAGTCCTGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372249 18 - 10304083 CTCTGGACACAGTCCTGA i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 925950 18 - 2200435 CTCTGGACACAGTCCTGA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364077 16 - 108792865 CTCTGG--ACAGTCTTGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213459 18 - 7082604 CTCTGGACACAGTCTCGG i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 931870 9 + 5252280 ---------CTGCCCTGT i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M e chlSab2.chr14 1447780 14 - 107702431 T e macFas5.chr13 1390230 43 - 111193037 T a score=17618.000000 s hg38.chr2_KI270774v1_alt 98289 3 + 223625 GGC s panTro5.chr2A 110125024 3 - 111504155 GGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336238 3 + 114371477 AGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362067 3 + 1464242 GGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086811 3 + 81552678 GGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417867 3 + 108979918 GAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390187 3 - 111193037 GGC i macFas5.chr13 T 43 C 0 s macNem1.NW_012011978v1 1418719 3 + 3644372 GGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372267 3 - 10304083 GGC i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 925968 3 - 2200435 GAC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364093 3 - 108792865 GGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213477 3 - 7082604 GGC i saiBol1.JH378218 C 0 T 61 s otoGar3.GL873658 931879 3 + 5252280 AGC i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M e chlSab2.chr14 1447780 14 - 107702431 T a score=-3209.000000 s hg38.chr2_KI270774v1_alt 98292 1 + 223625 -C s panTro5.chr2A 110125027 1 - 111504155 -C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336241 1 + 114371477 -C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362070 1 + 1464242 -C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086814 1 + 81552678 -C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417870 1 + 108979918 -A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390190 1 - 111193037 -C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418722 1 + 3644372 -C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372270 1 - 10304083 -C i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 925971 1 - 2200435 -A i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364096 1 - 108792865 -C i calJac3.chr14 C 0 T 59 s saiBol1.JH378218 1213419 1 - 7082604 -C i saiBol1.JH378218 T 61 C 0 s otoGar3.GL873658 931882 1 + 5252280 A- i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M e chlSab2.chr14 1447780 14 - 107702431 T a score=14552.000000 s hg38.chr2_KI270774v1_alt 98293 3 + 223625 CCT s panTro5.chr2A 110125028 3 - 111504155 CCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336242 3 + 114371477 CCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362071 3 + 1464242 CCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086815 3 + 81552678 CCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417871 3 + 108979918 CCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390191 3 - 111193037 CCG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418723 3 + 3644372 CCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372271 3 - 10304083 CCT i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 925972 3 - 2200435 CCT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364038 3 - 108792865 CCA i calJac3.chr14 T 59 C 0 s saiBol1.JH378218 1213420 3 - 7082604 CCA i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 931883 3 + 5252280 CTT i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M e chlSab2.chr14 1447780 14 - 107702431 T a score=263231.000000 s hg38.chr2_KI270774v1_alt 98296 39 + 223625 -----------GGAGCAGGTGACACCTCGCCGGGCAGGTCCCT-GGGCCTC s panTro5.chr2A 110125031 39 - 111504155 -----------GGAGCAGGTGACACCTTGCCAGGCAGGTCCCT-GGGCCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336245 39 + 114371477 -----------GGAGCAGGTGACACCTTGCCAGGCAGGTCCCT-GGGCCTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362074 39 + 1464242 -----------GGAGCAGGTGACACCTCGCCGGGCAGGTCCCT-GGGCCTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086818 39 + 81552678 -----------GGAGCAGGTGACACCTCGCTGGGCAGGTCCCT-GGGCCTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417874 39 + 108979918 -----------GGAGCAGGTGACACCTCACTGGGCAGGTCCCT-GGGCCTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390194 39 - 111193037 -----------CGAGCGGGTGACACCTCACTGGGCAGGTCCCT-GGGCCTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418726 39 + 3644372 -----------GGAGCAGGTGACACCTTGCTGGGCAGGTCCCT-GGGCCTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372274 39 - 10304083 -----------GGAGCAGGTGACACCTCACTGGGCAGGTCCCT-GGGCCTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447766 40 - 107702431 -----------GGAGCAGGTGACACCTCACTGGGCAGGTCTCTGGGGCCCC i chlSab2.chr14 T 14 C 0 s manLeu1.NW_012103754v1 925975 39 - 2200435 -----------GGAGCAGGTGACACCTTGCTGGGCAGGTCCCT-GGGCCTC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364041 39 - 108792865 -----------GGAGCAGGTGACTCCTCACTGGGCAGGTCCCT-GGGCCTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213423 39 - 7082604 -----------GGAGCAGGTGACTCCTCGCCGGGCAGGTGCCT-GGGCCTC i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 931886 50 + 5252280 GGACCTTGCTCGTGCCAGGTCACCCCCTGCCCCCCAGAACTTG-AGGCTTC i otoGar3.GL873658 C 0 I 929 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=34218.000000 s hg38.chr2_KI270774v1_alt 98335 7 + 223625 TGGACAC s panTro5.chr2A 110125070 7 - 111504155 TGCACAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336284 7 + 114371477 TGCACAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362113 7 + 1464242 TGCACGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086857 7 + 81552678 TGGACAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417913 7 + 108979918 TGGACAC i rheMac8.chr13 C 0 T 106 s macFas5.chr13 1390233 7 - 111193037 TGGACAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418765 7 + 3644372 TGGACAC i macNem1.NW_012011978v1 C 0 T 106 s cerAty1.NW_012000820v1 1372313 7 - 10304083 TGCACAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447806 7 - 107702431 TGGACAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926014 7 - 2200435 TGCACAC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364080 5 - 108792865 TGG--AC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213462 7 - 7082604 TGGACAC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=27401.000000 s hg38.chr2_KI270774v1_alt 98342 7 + 223625 AGTCCCA s panTro5.chr2A 110125077 7 - 111504155 AGTCTCG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336291 7 + 114371477 AGTCTCG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362120 7 + 1464242 AGTCCCG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086864 7 + 81552678 AGTCCCG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1390240 7 - 111193037 AGTCCTG i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1372320 7 - 10304083 AGTCTCA i cerAty1.NW_012000820v1 C 0 T 61 s chlSab2.chr14 1447813 7 - 107702431 AGTCCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926021 7 - 2200435 AGTCCTG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364085 7 - 108792865 AGTCTTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213469 7 - 7082604 AGTCTCG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M e macNem1.NW_012011978v1 1418772 106 + 3644372 T e rheMac8.chr13 1417920 106 + 108979918 T a score=1778.000000 s hg38.chr2_KI270774v1_alt 98349 1 + 223625 G s panTro5.chr2A 110125084 1 - 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336298 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362127 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086871 1 + 81552678 G i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1390247 1 - 111193037 A i macFas5.chr13 C 0 T 61 s cerAty1.NW_012000820v1 1372266 1 - 10304083 A i cerAty1.NW_012000820v1 T 61 C 0 s chlSab2.chr14 1447820 1 - 107702431 A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926028 1 - 2200435 A i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364092 1 - 108792865 G i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213476 1 - 7082604 G i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M e macNem1.NW_012011978v1 1418772 106 + 3644372 T e rheMac8.chr13 1417920 106 + 108979918 T a score=14133.000000 s hg38.chr2_KI270774v1_alt 98350 3 + 223625 GGC s panTro5.chr2A 110125085 3 - 111504155 GGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336299 3 + 114371477 GGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362128 3 + 1464242 GGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086872 3 + 81552678 GGC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1390187 3 - 111193037 GGC i macFas5.chr13 T 61 C 0 s cerAty1.NW_012000820v1 1372267 3 - 10304083 GGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447821 3 - 107702431 GAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926029 3 - 2200435 GAC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364093 3 - 108792865 GGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213477 3 - 7082604 GGC i saiBol1.JH378218 C 0 T 61 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M e macNem1.NW_012011978v1 1418772 106 + 3644372 T e rheMac8.chr13 1417920 106 + 108979918 T a score=1639.000000 s hg38.chr2_KI270774v1_alt 98353 1 + 223625 C s panTro5.chr2A 110125088 1 - 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336302 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362131 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086875 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1390190 1 - 111193037 C i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1372270 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447824 1 - 107702431 A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926032 1 - 2200435 A i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364096 1 - 108792865 C i calJac3.chr14 C 0 T 59 s saiBol1.JH378218 1213419 1 - 7082604 C i saiBol1.JH378218 T 61 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M e macNem1.NW_012011978v1 1418772 106 + 3644372 T e rheMac8.chr13 1417920 106 + 108979918 T a score=13947.000000 s hg38.chr2_KI270774v1_alt 98354 4 + 223625 CCTG s panTro5.chr2A 110125089 4 - 111504155 CCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336303 4 + 114371477 CCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362132 4 + 1464242 CCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086876 4 + 81552678 CCTG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1390191 4 - 111193037 CCGC i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1372271 4 - 10304083 CCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447825 4 - 107702431 CCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926033 4 - 2200435 CCTG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364038 4 - 108792865 CCAG i calJac3.chr14 T 59 C 0 s saiBol1.JH378218 1213420 4 - 7082604 CCAG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M e macNem1.NW_012011978v1 1418772 106 + 3644372 T e rheMac8.chr13 1417920 106 + 108979918 T a score=114113.000000 s hg38.chr2_KI270774v1_alt 98358 18 + 223625 GAGCAGGTGACACCTCGC s panTro5.chr2A 110125093 18 - 111504155 GAGCAGGTGACACCTTGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336307 18 + 114371477 GAGCAGGTGACACCTTGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362136 18 + 1464242 GAGCAGGTGACACCTCGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086880 18 + 81552678 GAGCAGGTGACACCTCGC i nomLeu3.chr19 C 0 T 61 s rheMac8.chr13 1417814 18 + 108979918 GAGCGGGTGACACCTCAC i rheMac8.chr13 T 106 C 0 s macFas5.chr13 1390195 18 - 111193037 GAGCGGGTGACACCTCAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418666 18 + 3644372 GAGCGGGTGACACCTCAC i macNem1.NW_012011978v1 T 106 C 0 s cerAty1.NW_012000820v1 1372275 18 - 10304083 GAGCAGGTGACACCTCAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447829 18 - 107702431 GAGCAGATGTCACCTCAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926037 18 - 2200435 GAGCAGGTGACACCTTGC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364042 18 - 108792865 GAGCAGGTGACTCCTCAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213424 18 - 7082604 GAGCAGGTGACTCCTCGC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=158053.000000 s hg38.chr2_KI270774v1_alt 98376 22 + 223625 CGGGCAGGTCCCTGGGCCTCTG s panTro5.chr2A 110125111 22 - 111504155 CAGGCAGGTCCCTGGGCCTCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336325 22 + 114371477 TGGGCAGGTCCCTGGGCCTCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362154 22 + 1464242 TGGGCAGGTTCCTGGGCCTCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086837 22 + 81552678 TGGGCAGGTCCCTGGGCCTCTG i nomLeu3.chr19 T 61 C 0 s rheMac8.chr13 1417832 22 + 108979918 TGGGCAGGTCCCTGGGCCTCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390213 22 - 111193037 TGGGCAGGTCCCTGGGCCTCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418684 22 + 3644372 TGGGCAGGTCCCTGGGCCTCTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372293 22 - 10304083 TGGGCAGGTCCCTGGGCCTCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447847 22 - 107702431 TGGGCAGGTCCCTGGGCCTCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926055 22 - 2200435 TGGGCAGGTCCCTGGGCCTCTG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364060 22 - 108792865 TGGGCAGGTCCCTGGGCCTCTG i calJac3.chr14 C 0 T 45 s saiBol1.JH378218 1213442 22 - 7082604 CGGGCAGGTGCCTGGGCCTCTG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=58895.000000 s hg38.chr2_KI270774v1_alt 98398 13 + 223625 CACACAGTCCCGG s panTro5.chr2A 110125133 13 - 111504155 CACACAGTCTCGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336347 13 + 114371477 GACACAGTCCTAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362176 13 + 1464242 GACACAGTCCCAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086859 13 + 81552678 GACACAGTCCCGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417854 13 + 108979918 GACACAGTCCTGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390235 13 - 111193037 GACACAGTCCTGA i macFas5.chr13 C 0 T 61 s macNem1.NW_012011978v1 1418706 13 + 3644372 GACACAGTCCTGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372315 13 - 10304083 CACACAGTCTCAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447869 13 - 107702431 CACACAGTCCTGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926077 13 - 2200435 CACACAGTCCTGA i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1213464 13 - 7082604 GACACAGTCTCGG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e calJac3.chr14 1364082 45 - 108792865 T e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=17171.000000 s hg38.chr2_KI270774v1_alt 98411 3 + 223625 GGC s panTro5.chr2A 110125146 3 - 111504155 GGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336360 3 + 114371477 GGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362189 3 + 1464242 GGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086872 3 + 81552678 GGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417867 3 + 108979918 GAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390187 3 - 111193037 GGC i macFas5.chr13 T 61 C 0 s macNem1.NW_012011978v1 1418719 3 + 3644372 GGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372328 3 - 10304083 GGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447882 3 - 107702431 GGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926090 3 - 2200435 GAC i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1213477 3 - 7082604 GGC i saiBol1.JH378218 C 0 T 61 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e calJac3.chr14 1364082 45 - 108792865 T e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=5232.000000 s hg38.chr2_KI270774v1_alt 98414 1 + 223625 C s panTro5.chr2A 110125149 1 - 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336363 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362192 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086875 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417870 1 + 108979918 A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390190 1 - 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418722 1 + 3644372 C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372331 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 T 118 s chlSab2.chr14 1447885 1 - 107702431 C i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926093 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364037 1 - 108792865 C i calJac3.chr14 T 45 C 0 s saiBol1.JH378218 1213419 1 - 7082604 C i saiBol1.JH378218 T 61 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=17390.000000 s hg38.chr2_KI270774v1_alt 98415 4 + 223625 CCTG s panTro5.chr2A 110125150 4 - 111504155 CCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336364 4 + 114371477 CCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362193 4 + 1464242 CCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086876 4 + 81552678 CCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417871 4 + 108979918 CCTG i rheMac8.chr13 C 0 T 61 s macFas5.chr13 1390191 4 - 111193037 CCGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418723 4 + 3644372 CCTG i macNem1.NW_012011978v1 C 0 T 61 s chlSab2.chr14 1447886 4 - 107702431 CCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926094 4 - 2200435 CCTG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364038 4 - 108792865 CCAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213420 4 - 7082604 CCAG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M e cerAty1.NW_012000820v1 1372332 118 - 10304083 T a score=310299.000000 s hg38.chr2_KI270774v1_alt 98419 51 + 223625 GAGCAGGTGACACCTCACCGGGCAGGTCCCTGGGCCTCTGGACACAGTCCC s panTro5.chr2A 110125154 51 - 111504155 GAGCAGGTGACACCTTGCTGGGCAGGTCCCTGGGCCTCTGGACACAGTCCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336368 51 + 114371477 GAGCAGGTGACACCTCGCCGGGCAGGTCCCTGGGCCTCTGCACACAGTCCC i panPan2.chr2A C 0 T 61 s gorGor5.CYUI01015607v1 1362197 51 + 1464242 GAGCAGGTGACACCTCACTGGGCAGGTCCCTGGGCCTCTGCACACAGTCCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086880 50 + 81552678 GAGCAGGTGACACCTCGCTGGGCACGGTCTTGGGGCCGTGG-CACAGCACT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417814 51 + 108979918 GAGCGGGTGACACCTCACTGGGCAGGTCCCTGGGCCTCTGGACACAGTCCT i rheMac8.chr13 T 61 C 0 s macFas5.chr13 1390195 51 - 111193037 GAGCGGGTGACACCTCACTGGGCAGGTCCCTGGGCCTCTGGACACAGTCCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418666 51 + 3644372 GAGCGGGTGACACCTCACTGGGCAGGTCCCTGGGCCTCTGGACACAGTCCT i macNem1.NW_012011978v1 T 61 C 0 s cerAty1.NW_012000820v1 1372214 51 - 10304083 GAGCCGGTGACACCTCACTGGGCAGGTCCCTGGGCCTCTGGACACAGTCCT i cerAty1.NW_012000820v1 T 118 C 0 s chlSab2.chr14 1447890 51 - 107702431 GGGCAGATGTCACCTCACTGGGCAGGTCCCTGGGCCTCTGGACACAGTCCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926098 51 - 2200435 GAGCAGGTGACACCTCACTGGGCAGGTCCCTGGGCCTCTGCACACAGTCCT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364042 49 - 108792865 GAGCAGGTGACTCCTCACTGGGCAGGTCCCTGGGCCTCTGG--ACAGTCTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213424 51 - 7082604 GAGCAGGTGACTCCTCGCCGGGCAGGTGCCTGGGCCTCTGGACACAGTCTC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=22953.000000 s hg38.chr2_KI270774v1_alt 98470 5 + 223625 GGGGC s panTro5.chr2A 110125205 5 - 111504155 AGGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336358 5 + 114371477 AGGGC i panPan2.chr2A T 61 C 0 s gorGor5.CYUI01015607v1 1362248 5 + 1464242 GGGGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086930 5 + 81552678 AGGAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417865 5 + 108979918 GAGAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390246 5 - 111193037 GAGAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418717 5 + 3644372 GAGGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372265 5 - 10304083 GAGGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447941 5 - 107702431 GCGGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926149 5 - 2200435 GAGAC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364091 5 - 108792865 GGGGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213475 5 - 7082604 GGGGC i saiBol1.JH378218 C 0 T 61 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=1353.000000 s hg38.chr2_KI270774v1_alt 98475 1 + 223625 C s panTro5.chr2A 110125210 1 - 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336363 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362253 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086935 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417870 1 + 108979918 A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390251 1 - 111193037 A i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418722 1 + 3644372 C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372270 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447946 1 - 107702431 C i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926154 1 - 2200435 A i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364096 1 - 108792865 C i calJac3.chr14 C 0 T 59 s saiBol1.JH378218 1213419 1 - 7082604 C i saiBol1.JH378218 T 61 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=24218.000000 s hg38.chr2_KI270774v1_alt 98476 4 + 223625 CCTG s panTro5.chr2A 110125211 4 - 111504155 CCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336364 4 + 114371477 CCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362254 4 + 1464242 CCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086936 4 + 81552678 TCTG i nomLeu3.chr19 C 0 T 121 s rheMac8.chr13 1417871 4 + 108979918 CCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390252 4 - 111193037 CCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418723 4 + 3644372 CCTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372271 4 - 10304083 CCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447947 4 - 107702431 CCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926155 4 - 2200435 CCTG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364038 4 - 108792865 CCAG i calJac3.chr14 T 59 C 0 s saiBol1.JH378218 1213420 4 - 7082604 CCAG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=280320.000000 s hg38.chr2_KI270774v1_alt 98480 40 + 223625 GAGCAGGTGACACCTCACTGGGCAGGTCCCTGGGCCTCTG s panTro5.chr2A 110125215 40 - 111504155 GAGCAGGTGACACCTCGCCGGGCAGGTCCCTGGGCCTCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336368 40 + 114371477 GAGCAGGTGACACCTCGCCGGGCAGGTCCCTGGGCCTCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362258 40 + 1464242 GAGCAGGTGACACTTCGCCGGGCAGGTCCCTGGGCCTCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086819 40 + 81552678 GAGCAGGTGACACCTCGCTGGGCAGGTCCCTGGGCCTCTG i nomLeu3.chr19 T 121 C 0 s rheMac8.chr13 1417875 40 + 108979918 GAGCAGGTGACACCTCACTGGGCAGGTCCCTGGGCCTCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390256 40 - 111193037 GAGCAGGTGACACCTCACTGGGCAGGTCCCTGGGCCTCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418727 40 + 3644372 GAGCAGGTGACACCTTGCTGGGCAGGTCCCTGGGCCTCTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372275 40 - 10304083 GAGCAGGTGACACCTCACTGGGCAGGTCCCTGGGCCTCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447951 40 - 107702431 GAGCAGGTGACACCTCGCTGGGCAGGTCCCTGGACCCCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926159 40 - 2200435 GAGCAGGTGACACCTCGCTGGGCAGGTCCCTGGGCCTCTG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364042 40 - 108792865 GAGCAGGTGACTCCTCACTGGGCAGGTCCCTGGGCCTCTG i calJac3.chr14 C 0 T 45 s saiBol1.JH378218 1213424 40 - 7082604 GAGCAGGTGACTCCTCGCCGGGCAGGTGCCTGGGCCTCTG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=52438.000000 s hg38.chr2_KI270774v1_alt 98520 11 + 223625 CACACAGTCCC s panTro5.chr2A 110125255 11 - 111504155 CACACAGTCCC i panTro5.chr2A C 0 T 122 s panPan2.chr2A 1336408 11 + 114371477 CACACAGTCCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362298 11 + 1464242 GACACAGTCCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086859 11 + 81552678 GACACAGTCCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417915 11 + 108979918 GACACAGTCCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390296 11 - 111193037 GACACAGTCCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418767 11 + 3644372 GACACAGTCCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372315 11 - 10304083 CACACAGTCTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447991 11 - 107702431 GACATGGTCCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926199 11 - 2200435 CACACAGTCTC i manLeu1.NW_012103754v1 C 0 T 61 s saiBol1.JH378218 1213464 11 - 7082604 GACACAGTCTC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e calJac3.chr14 1364082 45 - 108792865 T e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=20009.000000 s hg38.chr2_KI270774v1_alt 98531 5 + 223625 GGGGC s panTro5.chr2A 110125144 5 - 111504155 GGGGC i panTro5.chr2A T 122 C 0 s panPan2.chr2A 1336419 5 + 114371477 GGGGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362309 5 + 1464242 AGGGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086870 5 + 81552678 GGGGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417926 5 + 108979918 GAAGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390307 5 - 111193037 GAAGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418778 5 + 3644372 GAAGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372326 5 - 10304083 AGGGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1448002 5 - 107702431 GAAGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926149 5 - 2200435 GAGAC i manLeu1.NW_012103754v1 T 61 C 0 s saiBol1.JH378218 1213475 5 - 7082604 GGGGC i saiBol1.JH378218 C 0 T 61 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e calJac3.chr14 1364082 45 - 108792865 T e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=5232.000000 s hg38.chr2_KI270774v1_alt 98536 1 + 223625 C s panTro5.chr2A 110125149 1 - 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336424 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362314 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086875 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417931 1 + 108979918 C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390312 1 - 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418783 1 + 3644372 C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372331 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 T 61 s chlSab2.chr14 1448007 1 - 107702431 C i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926154 1 - 2200435 A i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364037 1 - 108792865 C i calJac3.chr14 T 45 C 0 s saiBol1.JH378218 1213419 1 - 7082604 C i saiBol1.JH378218 T 61 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=299696.000000 s hg38.chr2_KI270774v1_alt 98537 49 + 223625 CCTGGAGCAGGTGACACTTCGCCGGGCA-GGTCCCTGGGCCTCTGGACAC s panTro5.chr2A 110125150 49 - 111504155 CCTGGAGCAGGTGACACCTTGCTGGGCA-GGTCCCTGGGCCTCTGGACAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336425 49 + 114371477 CCTGGAGCAGGTGACACCTCGCTGGGCA-GGTCTCTGGGCCTCTGCACAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362315 49 + 1464242 CCTGGAGCAGGTGACACCTCACTGGGCA-GGTCCCTGGACCTCTGCACAC i gorGor5.CYUI01015607v1 C 0 T 61 s nomLeu3.chr19 1086876 48 + 81552678 CCTGGAGCAGGTGACACCTCGCTGGGCACGGTCTTGGGGCCGTGGCAC-- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417932 49 + 108979918 CCTGGAGCAGGTGACACCTTGCTGGGCA-GGTCCCTGGGCCTCTGCACAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390313 49 - 111193037 CCTGGAGCAGGTGACACCTTGCTGGGCA-GGTCCCTGGGCCTCTGCACAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418784 49 + 3644372 CCTGGAGCAGGTGACACCTTGCTGGGCA-GGTCCCTGGGCCTCTGCACAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372271 49 - 10304083 CCTGGAGCAGGTGACACCTCACTGGGCA-GGTCCCTGGGCCTCTGCACAC i cerAty1.NW_012000820v1 T 61 C 0 s chlSab2.chr14 1448008 49 - 107702431 CCTGGAGCAGGTGACACCTCGCTGGGCA-GGTCCCTAGGCCTCTGCACAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926155 49 - 2200435 CCTGGAGCAGGTGACACCTCGCTGGGCA-GGTCCCTGGGCCTCTGCACAC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364038 47 - 108792865 CCAGGAGCAGGTGACTCCTCACTGGGCA-GGTCCCTGGGCCTCTGG--AC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213420 49 - 7082604 CCAGGAGCAGGTGACTCCTCGCCGGGCA-GGTGCCTGGGCCTCTGGACAC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=59574.000000 s hg38.chr2_KI270774v1_alt 98586 11 + 223625 AGTCTCGGGGC s panTro5.chr2A 110125199 11 - 111504155 AGTCCTAGGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336474 10 + 114371477 AGTC-CGGGGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362303 11 + 1464242 AGTCCCAGGGC i gorGor5.CYUI01015607v1 T 61 C 0 s nomLeu3.chr19 1086924 11 + 81552678 AGCACTAGGAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417981 11 + 108979918 AGTCTCAGGGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390362 11 - 111193037 AGTCTCAGGGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418833 11 + 3644372 AGTCTCAGGGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372320 11 - 10304083 AGTCTCAGGGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1448057 11 - 107702431 AGTCTCAGGGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926204 11 - 2200435 AGTCTCAGGGC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364085 11 - 108792865 AGTCTTGGGGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213469 11 - 7082604 AGTCTCGGGGC i saiBol1.JH378218 C 0 T 61 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=7800.000000 s hg38.chr2_KI270774v1_alt 98597 1 + 223625 C s panTro5.chr2A 110125210 1 - 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336484 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362314 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086935 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417992 1 + 108979918 C i rheMac8.chr13 C 0 T 122 s macFas5.chr13 1390373 1 - 111193037 C i macFas5.chr13 C 0 T 122 s macNem1.NW_012011978v1 1418844 1 + 3644372 C i macNem1.NW_012011978v1 C 0 T 61 s cerAty1.NW_012000820v1 1372331 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 T 118 s chlSab2.chr14 1448068 1 - 107702431 C i chlSab2.chr14 C 0 T 289 s manLeu1.NW_012103754v1 926215 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 T 122 s calJac3.chr14 1364096 1 - 108792865 C i calJac3.chr14 C 0 T 59 s saiBol1.JH378218 1213419 1 - 7082604 C i saiBol1.JH378218 T 61 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=16343.000000 s hg38.chr2_KI270774v1_alt 98598 4 + 223625 CCTG s panTro5.chr2A 110125211 4 - 111504155 CCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336485 4 + 114371477 CCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362315 4 + 1464242 CCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086936 4 + 81552678 TCTG i nomLeu3.chr19 C 0 T 182 s rheMac8.chr13 1417871 4 + 108979918 CCTG i rheMac8.chr13 T 122 C 0 s macFas5.chr13 1390252 4 - 111193037 CCTG i macFas5.chr13 T 122 C 0 s macNem1.NW_012011978v1 1418784 4 + 3644372 CCTG i macNem1.NW_012011978v1 T 61 C 0 s manLeu1.NW_012103754v1 926094 4 - 2200435 CCTG i manLeu1.NW_012103754v1 T 122 C 0 s calJac3.chr14 1364038 4 - 108792865 CCAG i calJac3.chr14 T 59 C 0 s saiBol1.JH378218 1213420 4 - 7082604 CCAG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M e chlSab2.chr14 1448069 289 - 107702431 T e cerAty1.NW_012000820v1 1372332 118 - 10304083 T a score=72379.000000 s hg38.chr2_KI270774v1_alt 98602 13 + 223625 GAGCAGGTGACAG s panTro5.chr2A 110125215 13 - 111504155 GAGCAGGTGACAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336489 13 + 114371477 GAGCAGGTGACAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362319 13 + 1464242 GAGCAGGTGACAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086758 13 + 81552678 AAGCAGGTGACAC i nomLeu3.chr19 T 182 C 0 s rheMac8.chr13 1417875 13 + 108979918 GAGCAGGTGACAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390256 13 - 111193037 GAGCAGGTGACAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418788 13 + 3644372 GAGCAGGTGACAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372214 13 - 10304083 GAGCCGGTGACAC i cerAty1.NW_012000820v1 T 118 C 0 s manLeu1.NW_012103754v1 926098 13 - 2200435 GAGCAGGTGACAC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364042 13 - 108792865 GAGCAGGTGACTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213424 13 - 7082604 GAGCAGGTGACTC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M e chlSab2.chr14 1448069 289 - 107702431 T a score=174785.000000 s hg38.chr2_KI270774v1_alt 98615 27 + 223625 CTCACCGGGCAGGTCCCT-GGGCCTCTG s panTro5.chr2A 110125228 27 - 111504155 CTCGCCGGGCAGGTCCCT-GGGCCTCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336502 27 + 114371477 CTTGCCGGGCAGGTCCCT-GGGTCTCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362332 27 + 1464242 CTCACTGGGCAGGTCCCT-GGACCTCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086771 27 + 81552678 CTCGCTGGTCAGATCCCT-GGGCCTCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417888 27 + 108979918 CTCACTGGGCAGGTCCCT-GGGCCTCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390269 27 - 111193037 CTCACTGGGCAGGTCCCT-GGGCCTCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418801 27 + 3644372 CTTGCTGGGCAGGTCCCT-GGGCCTCTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372227 27 - 10304083 CTCACTGGGCAGGTCCCT-GGGCCTCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447780 28 - 107702431 CTCACTGGGCAGGTCTCTGGGGCCCCTG i chlSab2.chr14 T 289 C 0 s manLeu1.NW_012103754v1 926111 27 - 2200435 CTCACTGGGCAGGTCCCT-GGGCCTCTG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364055 27 - 108792865 CTCACTGGGCAGGTCCCT-GGGCCTCTG i calJac3.chr14 C 0 T 45 s saiBol1.JH378218 1213437 27 - 7082604 CTCGCCGGGCAGGTGCCT-GGGCCTCTG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=23937.000000 s hg38.chr2_KI270774v1_alt 98642 5 + 223625 CACAC s panTro5.chr2A 110125255 5 - 111504155 CACAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336529 5 + 114371477 GACAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362359 5 + 1464242 CACAC i gorGor5.CYUI01015607v1 C 0 T 122 s nomLeu3.chr19 1086798 5 + 81552678 GACAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417915 5 + 108979918 GACAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390296 5 - 111193037 GACAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418828 5 + 3644372 CACAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372254 5 - 10304083 GACAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447808 5 - 107702431 GACAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926138 5 - 2200435 CACAC i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1213464 5 - 7082604 GACAC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e calJac3.chr14 1364082 45 - 108792865 T e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=35893.000000 s hg38.chr2_KI270774v1_alt 98647 8 + 223625 AGTCCCGG s panTro5.chr2A 110125260 8 - 111504155 AGTCCCGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336534 8 + 114371477 AGTCTTGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362242 8 + 1464242 AGTCCCGG i gorGor5.CYUI01015607v1 T 122 C 0 s nomLeu3.chr19 1086803 8 + 81552678 AGTCCCAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417920 8 + 108979918 AGTCCTGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390301 8 - 111193037 AGTCCTGA i macFas5.chr13 C 0 T 122 s macNem1.NW_012011978v1 1418833 8 + 3644372 AGTCTCAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372259 8 - 10304083 AGTCCTGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447813 8 - 107702431 AGTCCTGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926143 8 - 2200435 AGTCCTGA i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1213469 8 - 7082604 AGTCTCGG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e calJac3.chr14 1364082 45 - 108792865 T e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=11632.000000 s hg38.chr2_KI270774v1_alt 98655 3 + 223625 GGC s panTro5.chr2A 110125268 3 - 111504155 GGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336542 3 + 114371477 GGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362250 3 + 1464242 GGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086811 3 + 81552678 GGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417928 3 + 108979918 AGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390187 3 - 111193037 GGC i macFas5.chr13 T 122 C 0 s macNem1.NW_012011978v1 1418841 3 + 3644372 GGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372267 3 - 10304083 GGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447821 2 - 107702431 -GA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926151 2 - 2200435 -GA i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1213477 3 - 7082604 GGC i saiBol1.JH378218 C 0 T 61 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e calJac3.chr14 1364082 45 - 108792865 T e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=7800.000000 s hg38.chr2_KI270774v1_alt 98658 1 + 223625 C s panTro5.chr2A 110125271 1 - 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336545 1 + 114371477 C i panPan2.chr2A C 0 T 182 s gorGor5.CYUI01015607v1 1362253 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086814 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417931 1 + 108979918 C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390190 1 - 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418844 1 + 3644372 C i macNem1.NW_012011978v1 C 0 T 179 s cerAty1.NW_012000820v1 1372270 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447823 1 - 107702431 C i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012103754v1 926153 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 I 1 s calJac3.chr14 1364037 1 - 108792865 C i calJac3.chr14 T 45 C 0 s saiBol1.JH378218 1213419 1 - 7082604 C i saiBol1.JH378218 T 61 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=19016.000000 s hg38.chr2_KI270774v1_alt 98659 4 + 223625 CCTG s panTro5.chr2A 110125272 4 - 111504155 CCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336364 4 + 114371477 CCTG i panPan2.chr2A T 182 C 0 s gorGor5.CYUI01015607v1 1362254 4 + 1464242 CCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086815 4 + 81552678 CCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417932 4 + 108979918 CCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390191 3 - 111193037 -CCG i macFas5.chr13 C 0 I 1 s cerAty1.NW_012000820v1 1372271 4 - 10304083 CCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447825 4 - 107702431 CCTG i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012103754v1 926155 4 - 2200435 CCTG i manLeu1.NW_012103754v1 I 1 C 0 s calJac3.chr14 1364038 4 - 108792865 CCAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213420 4 - 7082604 CCAG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M e macNem1.NW_012011978v1 1418845 179 + 3644372 T a score=349314.000000 s hg38.chr2_KI270774v1_alt 98663 55 + 223625 GAGCAGGTGACACCTCGCTGGGCAGGTCCCTGGGCCTCTGCACATAGTCCCGGGG s panTro5.chr2A 110125276 55 - 111504155 GAGCAGGTGACACCTCGCTGGGCAGGTCTCTGGGCCTCTGCACATAGTCCCGGGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336368 55 + 114371477 GAGCAGGTGACACCTCGCCGGGCAGGTCCCTGGGCCTCTGCACACAGTCCCGGGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362258 55 + 1464242 GAGCAGGTGACACTTCGCCGGGCAGGTCCCTGGGCCTCTGGACACAGTCCCAGGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086819 55 + 81552678 GAGCAGGTGACACCTCGCTGGGCAGGTCCCTGGGCCTCTGGACACAGTCCCGGGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417936 55 + 108979918 GAGCAGGTGACACCTTGCTGGGCAGGTCCCTGGGCCTCTGCACACAGTCTCAGGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390195 55 - 111193037 GAGCGGGTGACACCTCACTGGGCAGGTCCCTGGGCCTCTGGACACAGTCCTGAGA i macFas5.chr13 I 1 C 0 s macNem1.NW_012011978v1 1418666 55 + 3644372 GAGCGGGTGACACCTCACTGGGCAGGTCCCTGGGCCTCTGGACACAGTCCTGAGG i macNem1.NW_012011978v1 T 179 C 0 s cerAty1.NW_012000820v1 1372275 55 - 10304083 GAGCAGGTGACACCTCACTGGGCAGGTCCCTGGGCCTCTGCACACAGTCTCAGGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447829 55 - 107702431 GAGCAGATGTCACCTCACTGGGCAGGTCCCTGGGCCTCTGCACACAGTCCTGAGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926159 55 - 2200435 GAGCAGGTGACACCTCGCTGGGCAGGTCCCTGGGCCTCTGCACACAGTCTCAGGG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364042 53 - 108792865 GAGCAGGTGACTCCTCACTGGGCAGGTCCCTGGGCCTCTGG--ACAGTCTTGGGG i calJac3.chr14 C 0 T 58 s saiBol1.JH378218 1213424 55 - 7082604 GAGCAGGTGACTCCTCGCCGGGCAGGTGCCTGGGCCTCTGGACACAGTCTCGGGG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=6600.000000 s hg38.chr2_KI270774v1_alt 98718 1 + 223625 C s panTro5.chr2A 110125331 1 - 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336423 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362313 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086874 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417991 1 + 108979918 C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390250 1 - 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418721 1 + 3644372 C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372330 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447884 1 - 107702431 C i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926214 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1213479 1 - 7082604 C i saiBol1.JH378218 C 0 T 61 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e calJac3.chr14 1364095 58 - 108792865 T e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=5232.000000 s hg38.chr2_KI270774v1_alt 98719 1 + 223625 C s panTro5.chr2A 110125332 1 - 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336424 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362314 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086875 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417992 1 + 108979918 C i rheMac8.chr13 C 0 T 122 s macFas5.chr13 1390251 1 - 111193037 A i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418722 1 + 3644372 C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372331 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 T 118 s chlSab2.chr14 1447885 1 - 107702431 C i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926215 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 T 61 s calJac3.chr14 1364037 1 - 108792865 C i calJac3.chr14 T 58 C 0 s saiBol1.JH378218 1213419 1 - 7082604 C i saiBol1.JH378218 T 61 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=21526.000000 s hg38.chr2_KI270774v1_alt 98720 4 + 223625 CCTG s panTro5.chr2A 110125333 4 - 111504155 CCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336425 4 + 114371477 CCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362315 4 + 1464242 CCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086876 4 + 81552678 CCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417871 4 + 108979918 CCTG i rheMac8.chr13 T 122 C 0 s macFas5.chr13 1390252 4 - 111193037 CCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418723 4 + 3644372 CCTG i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1447886 4 - 107702431 CCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926155 4 - 2200435 CCTG i manLeu1.NW_012103754v1 T 61 C 0 s calJac3.chr14 1364038 4 - 108792865 CCAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213420 4 - 7082604 CCAG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M e cerAty1.NW_012000820v1 1372332 118 - 10304083 T a score=220735.000000 s hg38.chr2_KI270774v1_alt 98724 35 + 223625 GAGCAGGTGACACCTTGCCGGGCA-GGTCCCTGGGT s panTro5.chr2A 110125337 35 - 111504155 GAGCAGGTGACACCTTGCCGGGCA-GGTCCCTGGGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336429 35 + 114371477 GAGCAGGTGACACCTCGCTGGGCA-GGTCTCTGGGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362319 35 + 1464242 GAGCAGGTGACACCTCACTGGGCA-GGTCCCTGGAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086880 36 + 81552678 GAGCAGGTGACACCTCGCTGGGCACGGTCTTGGGGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417875 35 + 108979918 GAGCAGGTGACACCTCACTGGGCA-GGTCCCTGGGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390256 35 - 111193037 GAGCAGGTGACACCTCACTGGGCA-GGTCCCTGGGC i macFas5.chr13 C 0 T 61 s macNem1.NW_012011978v1 1418727 35 + 3644372 GAGCAGGTGACACCTTGCTGGGCA-GGTCCCTGGGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372214 35 - 10304083 GAGCCGGTGACACCTCACTGGGCA-GGTCCCTGGGC i cerAty1.NW_012000820v1 T 118 C 0 s chlSab2.chr14 1447890 35 - 107702431 GGGCAGATGTCACCTCACTGGGCA-GGTCCCTGGGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926159 35 - 2200435 GAGCAGGTGACACCTCGCTGGGCA-GGTCCCTGGGC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364042 35 - 108792865 GAGCAGGTGACTCCTCACTGGGCA-GGTCCCTGGGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213424 35 - 7082604 GAGCAGGTGACTCCTCGCCGGGCA-GGTGCCTGGGC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=30804.000000 s hg38.chr2_KI270774v1_alt 98759 6 + 223625 CTCTGG s panTro5.chr2A 110125372 6 - 111504155 CTCTGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336464 6 + 114371477 CTCTGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362354 6 + 1464242 CTCTGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086916 6 + 81552678 CGTGGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417910 6 + 108979918 CTCTGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390230 6 - 111193037 CTCTGG i macFas5.chr13 T 61 C 0 s macNem1.NW_012011978v1 1418762 6 + 3644372 CTCTGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372249 6 - 10304083 CTCTGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447925 6 - 107702431 CTCTGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926194 6 - 2200435 CTCTGC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364077 6 - 108792865 CTCTGG i calJac3.chr14 C 0 T 46 s saiBol1.JH378218 1213459 6 - 7082604 CTCTGG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=16741.000000 s hg38.chr2_KI270774v1_alt 98765 4 + 223625 ACAC s panTro5.chr2A 110125378 4 - 111504155 ACAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336470 4 + 114371477 ACAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362360 4 + 1464242 ACAC i gorGor5.CYUI01015607v1 C 0 T 61 s nomLeu3.chr19 1086922 2 + 81552678 AC-- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417916 4 + 108979918 ACAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390236 4 - 111193037 ACAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418768 4 + 3644372 ACAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372255 4 - 10304083 ACAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447931 4 - 107702431 ACAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926200 4 - 2200435 ACAC i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1213465 4 - 7082604 ACAC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e calJac3.chr14 1364083 46 - 108792865 T e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=21244.000000 s hg38.chr2_KI270774v1_alt 98769 6 + 223625 AGTCTT s panTro5.chr2A 110125382 6 - 111504155 AGTCTT i panTro5.chr2A C 0 T 122 s panPan2.chr2A 1336474 5 + 114371477 AGTCC- i panPan2.chr2A C 0 T 60 s gorGor5.CYUI01015607v1 1362303 6 + 1464242 AGTCCC i gorGor5.CYUI01015607v1 T 61 C 0 s nomLeu3.chr19 1086924 6 + 81552678 AGCACT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417920 6 + 108979918 AGTCCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390240 6 - 111193037 AGTCCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418772 6 + 3644372 AGTCCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372259 6 - 10304083 AGTCCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447935 6 - 107702431 AGTCCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926204 6 - 2200435 AGTCTC i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1213469 6 - 7082604 AGTCTC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e calJac3.chr14 1364083 46 - 108792865 T e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=18025.000000 s hg38.chr2_KI270774v1_alt 98775 5 + 223625 GGGGC s panTro5.chr2A 110125266 5 - 111504155 GGGGC i panTro5.chr2A T 122 C 0 s panPan2.chr2A 1336419 5 + 114371477 GGGGC i panPan2.chr2A T 60 C 0 s gorGor5.CYUI01015607v1 1362309 5 + 1464242 AGGGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086930 5 + 81552678 AGGAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417926 5 + 108979918 GAAGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390246 5 - 111193037 GAGAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418778 5 + 3644372 GAAGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372265 5 - 10304083 GAGGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447941 5 - 107702431 GCGGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926210 5 - 2200435 AGGGC i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1213475 5 - 7082604 GGGGC i saiBol1.JH378218 C 0 T 61 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e calJac3.chr14 1364083 46 - 108792865 T e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=5232.000000 s hg38.chr2_KI270774v1_alt 98780 1 + 223625 C s panTro5.chr2A 110125271 1 - 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336424 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362314 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086935 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417931 1 + 108979918 C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390251 1 - 111193037 A i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418783 1 + 3644372 C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372270 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447946 1 - 107702431 C i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926215 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 T 122 s calJac3.chr14 1364037 1 - 108792865 C i calJac3.chr14 T 46 C 0 s saiBol1.JH378218 1213419 1 - 7082604 C i saiBol1.JH378218 T 61 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=24218.000000 s hg38.chr2_KI270774v1_alt 98781 4 + 223625 CCTG s panTro5.chr2A 110125272 4 - 111504155 CCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336425 4 + 114371477 CCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362315 4 + 1464242 CCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086936 4 + 81552678 TCTG i nomLeu3.chr19 C 0 T 97 s rheMac8.chr13 1417932 4 + 108979918 CCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390252 4 - 111193037 CCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418784 4 + 3644372 CCTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372271 4 - 10304083 CCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447947 4 - 107702431 CCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926094 4 - 2200435 CCTG i manLeu1.NW_012103754v1 T 122 C 0 s calJac3.chr14 1364038 4 - 108792865 CCAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213420 4 - 7082604 CCAG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=140722.000000 s hg38.chr2_KI270774v1_alt 98785 24 + 223625 GAGCAGGTGACACCTCGCTGGGCA s panTro5.chr2A 110125276 24 - 111504155 GAGCAGGTGACACCTCGCTGGGCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336429 24 + 114371477 GAGCAGGTGACACCTCGCTGGGCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362319 24 + 1464242 GAGCAGGTGACACCTCACTGGGCA i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1417936 24 + 108979918 GAGCAGGTGACACCTTGCTGGGCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390256 24 - 111193037 GAGCAGGTGACACCTCACTGGGCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418788 24 + 3644372 GAGCAGGTGACACCTTGCTGGGCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372275 24 - 10304083 GAGCAGGTGACACCTCACTGGGCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447951 24 - 107702431 GAGCAGGTGACACCTCGCTGGGCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926098 24 - 2200435 GAGCAGGTGACACCTCACTGGGCA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364042 24 - 108792865 GAGCAGGTGACTCCTCACTGGGCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213424 24 - 7082604 GAGCAGGTGACTCCTCGCCGGGCA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M e nomLeu3.chr19 1086940 97 + 81552678 T a score=128060.000000 s hg38.chr2_KI270774v1_alt 98809 21 + 223625 GGTCCCTGGGCCTCTGCACAT s panTro5.chr2A 110125300 21 - 111504155 GGTCTCTGGGCCTCTGCACAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336453 21 + 114371477 GGTCTCTGGGCCTCTGCACAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362343 21 + 1464242 GGTCCCTGGACCTCTGCACAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086843 21 + 81552678 GGTCCCTGGGCCTCTGGACAC i nomLeu3.chr19 T 97 C 0 s rheMac8.chr13 1417960 21 + 108979918 GGTCCCTGGGCCTCTGCACAC i rheMac8.chr13 C 0 T 61 s macFas5.chr13 1390280 21 - 111193037 GGTCCCTGGGCCTCTGGACAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418812 21 + 3644372 GGTCCCTGGGCCTCTGCACAC i macNem1.NW_012011978v1 C 0 T 61 s cerAty1.NW_012000820v1 1372299 21 - 10304083 GGTCCCTGGGCCTCTGCACAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447975 21 - 107702431 GGTCCCTGGACCCCTGGACAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926122 21 - 2200435 GGTCCCTGGGCCTCTGCACAC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364066 19 - 108792865 GGTCCCTGGGCCTCTGG--AC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213448 21 - 7082604 GGTGCCTGGGCCTCTGGACAC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=4664.000000 s hg38.chr2_KI270774v1_alt 98830 1 + 223625 A s panTro5.chr2A 110125321 1 - 111504155 A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336474 1 + 114371477 A i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1086864 1 + 81552678 A i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417920 1 + 108979918 A i rheMac8.chr13 T 61 C 0 s macFas5.chr13 1390301 1 - 111193037 A i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418772 1 + 3644372 A i macNem1.NW_012011978v1 T 61 C 0 s cerAty1.NW_012000820v1 1372320 1 - 10304083 A i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1447996 1 - 107702431 G i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926143 1 - 2200435 A i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364085 1 - 108792865 A i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213469 1 - 7082604 A i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M e gorGor5.CYUI01015607v1 1362364 0 + 1464242 C a score=10938.000000 s hg38.chr2_KI270774v1_alt 98831 3 + 223625 GTC s panTro5.chr2A 110125322 3 - 111504155 GTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336475 2 + 114371477 GT- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362364 2 + 1464242 GT- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086865 3 + 81552678 GTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417921 3 + 108979918 GTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390302 3 - 111193037 GTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418773 3 + 3644372 GTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372321 3 - 10304083 GTC i cerAty1.NW_012000820v1 C 0 I 3 s chlSab2.chr14 1447997 3 - 107702431 GTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926144 3 - 2200435 GTC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364086 3 - 108792865 GTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213470 3 - 7082604 GTC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=25630.000000 s hg38.chr2_KI270774v1_alt 98834 7 + 223625 CCGGAGC s panTro5.chr2A 110125325 7 - 111504155 CCGGGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336477 7 + 114371477 CCGGGGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362366 7 + 1464242 CCCGGGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086868 7 + 81552678 CCGGGGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417924 7 + 108979918 CTGAAGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390305 7 - 111193037 CTGAAGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418776 7 + 3644372 CTGAAGC i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1448000 7 - 107702431 CCGAAGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926147 7 - 2200435 CTGAGAC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364089 7 - 108792865 TTGGGGC i calJac3.chr14 C 0 T 59 s saiBol1.JH378218 1213473 7 - 7082604 TCGGGGC i saiBol1.JH378218 C 0 T 61 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M e cerAty1.NW_012000820v1 1372324 3 - 10304083 I a score=19172.000000 s hg38.chr2_KI270774v1_alt 98841 4 + 223625 CCCT s panTro5.chr2A 110125332 4 - 111504155 CCCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336484 4 + 114371477 CCCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362373 4 + 1464242 CCCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086875 4 + 81552678 CCCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417931 4 + 108979918 CCCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390312 4 - 111193037 CCCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418783 4 + 3644372 CCCT i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1448007 4 - 107702431 CCCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926154 4 - 2200435 ACCT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364037 4 - 108792865 CCCA i calJac3.chr14 T 59 C 0 s saiBol1.JH378218 1213419 4 - 7082604 CCCA i saiBol1.JH378218 T 61 C 0 e aotNan1.NW_018513311v1 93982 132 + 287728 I e mm10.chr12 89997624 195 - 120129022 I e cebCap1.NW_016107827v1 1301253 57 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M e cerAty1.NW_012000820v1 1372324 3 - 10304083 I a score=149597.000000 s hg38.chr2_KI270774v1_alt 98845 19 + 223625 GGAGCAGGTGACACCTTGC s panTro5.chr2A 110125336 19 - 111504155 GGAGCAGGTGACACCTTGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336488 19 + 114371477 GGAGCAGGTGACACCTTGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362377 19 + 1464242 GGAGCAGGTGACACTTCGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086879 19 + 81552678 GGAGCAGGTGACACCTCGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417935 19 + 108979918 GGAGCAGGTGACACCTTGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390316 19 - 111193037 GGAGCAGGTGACACCTTGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418787 19 + 3644372 GGAGCAGGTGACACCTTGC i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1448011 19 - 107702431 GGAGCAGGTGACACCTCGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926158 19 - 2200435 GGAGCAGGTGACACCTCGC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364041 19 - 108792865 GGAGCAGGTGACTCCTCAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213423 19 - 7082604 GGAGCAGGTGACTCCTCGC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1301310 19 + 1864846 GGAGCAGGTGACTCCTCGC i cebCap1.NW_016107827v1 I 57 C 0 s aotNan1.NW_018513311v1 94114 19 + 287728 GGAGCAGGTGACTCCTCGC i aotNan1.NW_018513311v1 I 132 C 0 e mm10.chr12 89997624 195 - 120129022 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M e cerAty1.NW_012000820v1 1372324 3 - 10304083 I a score=133504.000000 s hg38.chr2_KI270774v1_alt 98864 20 + 223625 CGGGCAGGTCCCTGGGTCTC s panTro5.chr2A 110125355 20 - 111504155 CGGGCAGGTCCCTGGGTCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336507 20 + 114371477 CGGGCAGGTCCCTGGGTCTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362396 19 + 1464242 CGGGCAGGTCCCTGGG-CTC i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1417954 20 + 108979918 TGGGCAGGTCCCTGGGCCTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390335 20 - 111193037 TGGGCAGGTCCCTGGGCCTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418806 20 + 3644372 TGGGCAGGTCCCTGGGCCTC i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1448030 20 - 107702431 TGGGCAGGTCCCTAGGCCTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926177 20 - 2200435 TGGGCAGGTCCCTGGGCCTC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364060 20 - 108792865 TGGGCAGGTCCCTGGGCCTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213442 20 - 7082604 CGGGCAGGTGCCTGGGCCTC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1301329 20 + 1864846 TGGGCAGGTCCCTGGGCCTC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 94133 20 + 287728 TGGGCAGGTCCCTGGGCCTC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89997624 195 - 120129022 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M e cerAty1.NW_012000820v1 1372324 3 - 10304083 I e nomLeu3.chr19 1086898 0 + 81552678 C a score=15795.000000 s hg38.chr2_KI270774v1_alt 98884 2 + 223625 TG s panTro5.chr2A 110125375 2 - 111504155 TG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336527 2 + 114371477 TG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362415 2 + 1464242 TG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086898 2 + 81552678 TG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417974 2 + 108979918 TG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390355 2 - 111193037 TG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418826 2 + 3644372 TG i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1448050 2 - 107702431 TG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926197 2 - 2200435 TG i manLeu1.NW_012103754v1 C 0 I 11 s calJac3.chr14 1364080 2 - 108792865 TG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213462 2 - 7082604 TG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1301349 2 + 1864846 CG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 94153 2 + 287728 TG i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89997624 195 - 120129022 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M e cerAty1.NW_012000820v1 1372324 3 - 10304083 I a score=55260.000000 s hg38.chr2_KI270774v1_alt 98886 11 + 223625 GACACAGTCTT s panTro5.chr2A 110125377 11 - 111504155 GACACAGTCTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336529 11 + 114371477 GACACAGTCTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362417 11 + 1464242 GACACAGTCTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086900 11 + 81552678 GGCACGGTCTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417976 11 + 108979918 CACACAGTCTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390357 11 - 111193037 CACACAGTCTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418828 11 + 3644372 CACACAGTCTC i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1448052 11 - 107702431 CACACAGTCTC i chlSab2.chr14 C 0 C 0 s calJac3.chr14 1364082 9 - 108792865 G--ACAGTCTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213464 11 - 7082604 GACACAGTCTC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1301351 11 + 1864846 GACACGGTCCC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 94155 11 + 287728 GACACAGTCTC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89997624 195 - 120129022 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M e manLeu1.NW_012103754v1 926199 11 - 2200435 I e cerAty1.NW_012000820v1 1372324 3 - 10304083 I a score=2677.000000 s hg38.chr2_KI270774v1_alt 98897 1 + 223625 G s panTro5.chr2A 110125388 1 - 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336540 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362428 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086911 1 + 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417987 1 + 108979918 A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390368 1 - 111193037 A i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418839 1 + 3644372 A i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1448063 1 - 107702431 A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926210 1 - 2200435 A i manLeu1.NW_012103754v1 I 11 C 0 s calJac3.chr14 1364091 1 - 108792865 G i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213475 1 - 7082604 G i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1301362 1 + 1864846 A i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 94166 1 + 287728 G i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89997624 195 - 120129022 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M e cerAty1.NW_012000820v1 1372324 3 - 10304083 I a score=298972.000000 s hg38.chr2_KI270774v1_alt 98898 34 + 223625 GGGCCATGGCACAGCACTGGCACCTCTGCCCTCA s panTro5.chr2A 110125389 34 - 111504155 GGGCCATGGCACAGCACTGGCACCTCTGCCCTCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336541 34 + 114371477 GGGCCATGGCACAGCACTGGCACCTCTGCCCTCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362429 34 + 1464242 GGGCCATGGCACAGCACTGGCACCTCTACCCTCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086912 34 + 81552678 GGGCCGTGGCACAGCACTAGGACCTCTGCCCTTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1417988 34 + 108979918 GGGCCGTGGCACAGCACTAGCACCTCTGCCCTCG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390369 34 - 111193037 GGGCCGTGGCACAGCACTAGCACCTCTGCCCTCG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418840 34 + 3644372 GGGCCGTGGCACAGCACTAGCACCTCTGCCCTCG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372327 34 - 10304083 GGGCCGTGGCACAGCACTAGCACCTCTGCCCTCG i cerAty1.NW_012000820v1 I 3 C 0 s chlSab2.chr14 1448064 34 - 107702431 GGGCCGTGGCACAGCCCTAGCACCTCTGCCCTCG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926211 34 - 2200435 GGGCCGTGGCACAGCACTAGCACCTCTGCCCTCG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364092 34 - 108792865 GGGCCGTGGCGCAGCACTAGGACCTCTGCCCTCG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213476 34 - 7082604 GGGCGGTGGTGCAGCACTAGGACCTCTGCCCTCG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1301363 34 + 1864846 GGGCCGCAGCGCAGCACTAGGACCTCTGCCCTCG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 94167 34 + 287728 GGGCCGTGGCGCAGCACTAGGACCTCTGCCCTCG i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89997624 195 - 120129022 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1681865 61 + 4416731 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=103801.000000 s hg38.chr2_KI270774v1_alt 98932 13 + 223625 CCAGCCTTTCCCA--- s panTro5.chr2A 110125423 13 - 111504155 CCAGCCTTTCCCA--- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336575 13 + 114371477 CCAGCCTTTCCCA--- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362463 13 + 1464242 CCAGCCTTTCCCA--- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086946 13 + 81552678 CCAGCCTTTCCCA--- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1418022 13 + 108979918 CCGGCCTTTCCCA--- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390403 13 - 111193037 CCGGCCTTTCCCA--- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418874 13 + 3644372 CCTGCCTTTCCCA--- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372361 13 - 10304083 CCGGCCTTTCCCA--- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1448098 13 - 107702431 CCGGCCTTTCCCG--- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926245 13 - 2200435 CCGGCCTTTCCCA--- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1364126 13 - 108792865 ACAGCATTTCCCA--- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213510 13 - 7082604 ACAGCCCGTCCCA--- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1301397 13 + 1864846 ACAGCCTTTCCCA--- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 94201 13 + 287728 ACAGCCTTTCCCA--- i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1681926 16 + 4416731 CCAGCCTCCCCGTTAG i dasNov3.JH576208 I 61 C 0 e mm10.chr12 89997624 195 - 120129022 I e otoGar3.GL873658 931936 929 + 5252280 I e colAng1.NW_012118821v1 1360162 6210 - 13651311 M a score=546658.000000 s hg38.chr2_KI270774v1_alt 98945 60 + 223625 GGACTGGAGGC------CTTGTCTGTCGTTCAGGG--TCACAGA---ATCTGGAGTCCTCGCTGTTCCCAG s panTro5.chr2A 110125436 60 - 111504155 GGACTGGAGGC------CTTGTCTGTCGTTCAGGG--TCACAGA---ATCTGGAGTCCTCGCTGCTCCCAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336588 60 + 114371477 GGACTGGAGGC------CTTGTCTGTCGTTCAGGG--TCACAGA---ATATGGAGTCCTCGCTGCTCCCAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362476 60 + 1464242 GGACTGGAGGC------CTTGTCTGTCGTTCAGGG--TCACAGA---ATCTGGAGTCCTCGCTGTTCCCAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1086959 60 + 81552678 GGACTGGAGGC------CTTGTCTGTAGTTCAGGA--TCACAGG---CTCTGGAGTCCTCACTGCTCCCAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1418035 59 + 108979918 GGACTGGA-GA------CTTGTCTGTAGTTCAGGG--TCACAGA---CTCTGGAGTCCTCACTGCTCCCAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390416 59 - 111193037 GGACTGGA-GA------CTTGTCTGTAGTTCAGGG--TCACAGA---CTCTGGAGTCCTCACTGCTCCCAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418887 59 + 3644372 GGACTGGA-GA------CTCGTCTGTAGTTCAGGG--TCACAGA---CTCTGGAGTCCTCACTGCTCCCAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372374 59 - 10304083 GGACTGGA-GA------CTTGTCTGTAGTTCAGGG--TCACAGA---CTCTGGAGTCCTCACTGCTCCCAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1448111 59 - 107702431 GGACTGCA-GC------CTTGTTTGTAGTTCAGGG--TCACAGA---CTCTGGAGTCATCACTGCTCCCAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926258 59 - 2200435 GGACTGGA-GA------CTTGTCTGTAGTTCAGGG--TCACAGA---CTCTGGAGTCCTCACTGCTCCCAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1366377 59 - 13651311 GGACTGGA-GC------CTTGTCTGTAGTTCAGGA--TCACAGA---CTCTGGAGTCCTCACTGCTCCCAG i colAng1.NW_012118821v1 M 6210 C 0 s calJac3.chr14 1364139 60 - 108792865 GGCCTGGAGGC------CTCGTCTGTGGTTCAGGG--GCACAGG---CTCTGGAGCCCTCGCTGCCCCCAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213523 60 - 7082604 GGCCTGGAGGC------CTCGTCTGTGGTTCAGGG--GCACGGG---CTCTGGAGTCCTCGCTGCTCCCAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1301410 60 + 1864846 GGCCTGCAGGC------CTTGTCTGTGGTTCAGGG--GCACAGG---CTCTGGAGTCCTCGCCGCTCCCAG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 94214 60 + 287728 GGCCTGCGGGC------CTCGTCTGTGCTTCAGGG--GCACAGG---CTCTGGAGTCCTCGCTGCTCCCAG i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1681942 71 + 4416731 AAATTAGAAGCCTGTCTCTCATCTGTCTTCCAGGGCATTGCTGAGCTCTTCTGAGACCTTGCTGCCTGCCT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89997624 195 - 120129022 I e otoGar3.GL873658 931936 929 + 5252280 I a score=253894.000000 s hg38.chr2_KI270774v1_alt 99005 25 + 223625 CCACACCCAGCCCAGCCTCCTGCT-G s panTro5.chr2A 110125496 25 - 111504155 CCATACCCAGCCCAGCCTCCTGCT-G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336648 25 + 114371477 CCACACCCAGCCCAGCCTCCTGCT-G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362536 25 + 1464242 CCACACCCAGCCTAGCCTCCTGCT-G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1087019 25 + 81552678 CCACACCCAGCCCAGCCTCCTGCT-G i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1418094 25 + 108979918 CCACACCCAGCCCAGCCTTCTGCT-G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390475 25 - 111193037 CCACACCCAGCCCAGCCTTCTGCT-G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418946 25 + 3644372 CCACACCCAGCCCAGCCTTCTGCT-G i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372433 25 - 10304083 CCACACCCAGCCCAGCCTTCTGCT-G i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1448170 25 - 107702431 CCACACCCAGCCCAGCCGCCTGCT-G i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926317 25 - 2200435 CCACACCCAGCCCAGCCTTCTGCT-G i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1366436 25 - 13651311 CCACACCCAGCCCAGCCTTCTGCT-G i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1364199 25 - 108792865 CCACGCCCAGCCCAGCCTCCTGCGG- i calJac3.chr14 C 0 I 267 s saiBol1.JH378218 1213583 24 - 7082604 CCACACCCAGCCCAGCCTCTTGCG-- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1301470 24 + 1864846 ACACACCCAGCCCAGCCTCTTGCG-- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 94274 24 + 287728 CCACACCCAGCCCAGCCTCTTGTG-- i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 89997819 25 - 120129022 CTACATTCAGACCTACTTCCTGCT-A i mm10.chr12 I 195 C 0 s dasNov3.JH576208 1682013 25 + 4416731 CCACACCACACTGTGCCTCCTGCT-G i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 931936 929 + 5252280 I a score=996569.000000 s hg38.chr2_KI270774v1_alt 99030 112 + 223625 GGGGCC--ACATTTTACCCCAATTTTTCTGCATCTCAGGACTTCAC-AACCATATT-AGGAGTGGCAGTGAAGTCCATAACAGACTCGTAGGCTCCTTAAAAAAA-CTCTCCCTCCA s panTro5.chr2A 110125521 111 - 111504155 GGGGCC--ACATTTTACCCCAATTTTTCTGCATCTCAGGACTTCAC-AACCATATT-AGGAGCTGCAGTGAAGTCCATAACAGACTCGTAGGCTCCTTAAAAAA--CTCTCCCTCCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336673 111 + 114371477 GGGGCC--ACATTTTACCCCAATTTTTCTGCATCTCAGGACTTCAC-AACCATATT-AGGAGCTGCAGTGAAGTCCATAACAGACTCGTAGGCTCCTTAAAAAA--CTCTCCCTCCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362561 110 + 1464242 GGGGCC--ACATTTTACCCCAATTTTTCTGCATCTCAGGACTTCAC-AACCATATT-AGGA-CGGCAGTGAAGTCCATAACAGACTCGTAGGCTCCTTAAAAAA--CTCTCCCTCCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1087044 112 + 81552678 GGGGCC--ACA-TTTAACCCAATTTTTCTGCATCTCAGGACTTCAC-CACCATATT-AGGAGCTGCAGTGAAGTCCATAACAGACTTGTAGGCTCCTTAAAAAACTCTCTCCCTCCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1418119 112 + 108979918 GGGGCC--ACATTTTATCCCAATGTTTCTGCATCTCAGGACTTCACAAACCATATT-AGGAGCTGCAGTGAAGTCCATAACAGACTCGTAGACTCCTTAAAGCA--CTCTCCCTCCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390500 112 - 111193037 GGGGCC--ACATTTTATCCCAATGTTTCTGCATCTCAGGACTTCACAAACCATATT-AGGAGCTGCAGTGAAGTCCATAACAGACTCGTAGACTCCTTAAAGCA--CTCTCCCTCCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1418971 112 + 3644372 GGGGCC--ACATTTTATCCCAATGTTTCTGCATCTCAGGACTTCACAAACCATATT-AGGAGCTGCAGTGAAGTCCATAACAGACTCGTAGACTCCTTAAAGCA--CTCTCCCTCCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372458 112 - 10304083 GGGGCC--ACATTTTATCCCAATGTTTCTGCATCTCAGGACTTCACAAATCATATT-AGGAGCTGCAGTGAAGTCCATAACAGACTCGCAGACTCCTTAAAGCA--CTCTCCCTGCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1448195 114 - 107702431 GGGGCC--ACATTTTATCCCAATGTTTCTGCATCTCAGGACTTCACAAACCATGTT-AGGAGCTGCAGTGAAGTCCGTAACAGACTCGTAGACTCCTTAAAACACTCTCTCCCTCCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926342 112 - 2200435 GGGGCC--ACATTTTATCCCAATGTTTCTGCATCTCAGGACTTCACAAACCATATT-AGGAGCTGCAGTGAAGTCCATAACAGACTCGCAGACTCCTTAAAGCA--CTCTCCCTCCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1366461 113 - 13651311 GGGGCC--ACATTTTATCCCAATGTTTCTGCATCTCAGGACTTCAC-AACCATATT-AGGAGCTGCAATGAAGTCCATAACAGACTCGTAGACTCCTTAAAACACTCTCTCCCTCCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1364491 101 - 108792865 GGGGAC--ACATTTTCTTCCCAATC---------TCAGGACTTCAC-AGTCATGTT-AGGATCTGCCCTGAAGTCCCCAACAGACTCG-AGACTCCTTA--GAACTCTCTCCTTCCA i calJac3.chr14 I 267 C 0 s saiBol1.JH378218 1213607 113 - 7082604 GAGGCC--ACATTTTCTTCCCAATTTTCTGCATGTCAGGACTTCAT-AGTCATATT-AGGAGCTGCCGTGAAGTCCCTAACAGACTCATAGGCTCCTTAAGGAACTCTCTCCCTCCA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1301494 113 + 1864846 GGGGCC--ACATTTTCTTCCCAATTTTCTGCATCTCAGGACTTCAT-AGTCATATT-AGGAGCTGCCATGAAGTCCCTAACAGACTCATAGGCTCCTTAAAGAACGCTCTCCCTCCA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 94298 111 + 287728 GGGGCC--ACATTTTCTTCCCAATTTTCTGCATCTCAGGACTTCAT-AGTCATATT-ATGAGCTGCCGTGAAGTCCCTAACAGACTCGTAGGCTCCTTAAAGAA--CTCTCCCTCCA i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 89997844 104 - 120129022 GGAGCT--ACATGCTGTT-TAAATTTTCTG----TCTGAACATCAT-GACTGTACT--GCAGTCACCCTGCTG-CCTTCCCAGGCTCAGGAGCTCCTAAAGAAA--GCATCCTTCCA i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1682038 103 + 4416731 --AACCTGACCTTCTTTTTTCACTTTTA-----CTGACTACCTCAT-GGCCATATTTACAAGGGGCACAAAAGTCCTTCCCAGGATCATAGGCTTCTTAAGAGT------TCCTTCa i dasNov3.JH576208 C 0 I 17 e otoGar3.GL873658 931936 929 + 5252280 I a score=139481.000000 s hg38.chr2_KI270774v1_alt 99142 17 + 223625 CAGCCCCCAGGACTTCC s panTro5.chr2A 110125632 17 - 111504155 CAGCCCCCAGGACGTCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336784 17 + 114371477 CAGCCCCCAGGACGTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362671 17 + 1464242 CAGCCCCCAGGACGTCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1087156 17 + 81552678 CAGCCCCCAGGACATGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1418231 17 + 108979918 CAGCTCCCAAGAAGTGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390612 17 - 111193037 CAGCTCCCAAGAAGTGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1419083 17 + 3644372 CAGCTCCCAAGAAGTGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372570 17 - 10304083 CAGCTCCCAGGACGTGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1448309 17 - 107702431 CAGCCCCCAGGACGTGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926454 17 - 2200435 CAGCTCCCAAGACGTGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1366574 17 - 13651311 CAGCCCCCAGGACGTGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1364592 17 - 108792865 CTGCCCCCAGGACATGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213720 17 - 7082604 CAGCCGCCAGGACGTGC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1301607 16 + 1864846 -AGCCTCCAGGACGTGC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 94409 17 + 287728 CAGCCCCCAGGATGTGC i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 89997948 17 - 120129022 TCTTTCCTTCTGGGTAT i mm10.chr12 C 0 C 0 e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1682141 17 + 4416731 I a score=1113675.000000 s hg38.chr2_KI270774v1_alt 99159 116 + 223625 TGGTCACTGCCCG---CTCTGAGATCAGGGAAGCCG----TGGGGCCTCTCCCTGCCAGCTTCC-ATCCATGCCCCA-AGGATGGGCTACTC--ACCCCTAAT---TCCTGtccctcccctgc-aaatgga s panTro5.chr2A 110125649 116 - 111504155 TGGTCACTGCCCA---CTCTGAGATCAGGGAAGCCG----TGGGGCCTCTCCCTGCCAGCTTCC-ATCCATGCCCCA-Aggatgggctactc--acccctcat---tcctgtccctcacctgc-aaatgga i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336801 116 + 114371477 TGGTCACTGCCCA---CTCTGAGATCAGGGAAGCCG----TGGGGCCTCTCCCTGCCAGCTTCC-ATCCATGCCCCA-Aggatgggctactc--acccctcat---tcctgtccctcacctgc-aaatgga i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362688 116 + 1464242 TGGTCACTGCCCA---CTCTGAGATCAGGGAAGCCG----TGGGGCCTCTCCCTGCCAGCTTCC-ATCCATGCCCCG-AGGATGGGCTACTC--ACCCCTAAT---TCCTGtccctcacctgc-aaatgga i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1087173 116 + 81552678 TGGTCACTGCCCA---CTCTGAGATCAGGGAAGCCA----TGGGGCCTCTCCCTGCCAGCTTCC-ATCCATGCCCCA-AGGATGGGCTACTC--ACCCCTAAT---TCCTGtccctcacctgc-aaatgga i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1418248 116 + 108979918 CAGTCACTGCCCA---CTCTGAGATCAGGGAAGCCG----TGGGGCCTCTCCCTGCCAGCTTCC-ATCCATGCCCCA-AGGATGGGCTACTC--ACCCCCAAT---TCCTGtccctcacctgc-aagtgga i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390629 116 - 111193037 CAGTCACTGCCCA---CTCTGAGATCAGGGAAGCCG----TGGGGCCTCTCCCTGCCAGCTTCC-ATCCATGCCCCA-AGGATGGGCTACTC--ACCCCCAAT---TCCTGtccctcacctgc-aagtgga i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1419100 116 + 3644372 CAGTCACTGCCCA---CTCTGAGATCAGGGAAGCCG----TGGGGCCTCTCCCTGCCAGCTTCC-ATCCATGCCCCA-AGGATGGGCTACTC--ACCCCCAAT---TCCTGtccctcacctgc-aagtgga i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372587 116 - 10304083 CAGTCACTGCCCA---CTCTGAGATCAGGGAAGCCG----TGGGGCCTCTCCCTGCCAGCTTCC-ATCCATGCCCCA-AGGATGGGCTACTC--ACCCCCAAT---TCCTGtccctcacctgc-aagtgga i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1448326 116 - 107702431 CAGTCACTGCCCA---CTCTGAGATCAGGGAAGCTG----TGGGGCCTCTCCCTGCCAGCTTCC-ATCCATGCCCCA-AGGATGGGCTACTC--ACCCCCAGT---TCCTGTCCCTCACCTGC-AAGTGGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926471 116 - 2200435 CAGTCACTGCCCA---CTCTGAGATCAGGGAAGCCG----TGGGGCCTCTCCCTGCCAGCTTCC-ACCCATGCCCCA-AGGATGGGCTACTC--ACCCCCAAT---TCCTGtccctcacctgc-aagtgga i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1366591 116 - 13651311 CAGTCACTGCCCA---ctctgagatcagggaagccg----tggggcctctccctgccagcttcc-atccatgcacca-gggatgagctactc--acccccaat---tcctatccctcacctgc-aagtgga i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1364609 117 - 108792865 TGGTCACTGCCCA---CGCTGAGACGGGGGAAGCCA----CGGGGGCTTTCCCTGCCAGCTTCT-GTCCATGCTACAGAGGATGCGCTACTC--ACCCCTAAT---TCCTGCCCCTCACCCGC-ACATGGA i calJac3.chr14 C 0 I 3082 s saiBol1.JH378218 1213737 116 - 7082604 TGGTCACTGCCCA---CTCTGAGATGGGAGAAGCCA----CGGGGACCTTCCCTGCCAGCTTCC-ATCCATGCTGCA-AGGATGCGCCACTC--ACCCCTGAT---TCCTGCCCCTCACCTGC-ACGTGGA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1301623 116 + 1864846 TGGTCACTGCCCA---CTCTGAGATGGAGGAAGCCA----CGGGGCCTTTCCCTGCCAGCTTCC-ATCCATGCTGCA-AGGATGTGCTACTC--ACCCCTAAT---TCCTGCCCCTCACCTGA-GCACGGA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 94426 116 + 287728 TGGTCACTGCCCA---CTCTGAGATGGGGGAAGCCA----CGGGGCCTTTCCCTGCCAGCTTCC-ATCCATGCTGCA-AGGAAACGCTACTC--ACCCCTGGT---TCCTGCCCCTCACCTGC-ACATGGA i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 89997965 61 - 120129022 CAG-CACTGTCTA---CTCT---------------A----TAAAGCACTTCTT-------------------------CTGATGGGCATGTC--ACTCCCCTT---CCAAGTCT----------------- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1682158 130 + 4416731 tggttacgaaccagagctctgaaatgagataaagcaggttcagaacctattttagccctttactaagtaaggcactt-tgggtaagttacttaaactctttatgcatccatttctacatctataaaatgga i dasNov3.JH576208 I 17 C 0 e otoGar3.GL873658 931936 929 + 5252280 I a score=780872.000000 s hg38.chr2_KI270774v1_alt 99275 98 + 223625 gaacactggaaaattactcatcgcagtcattatttgtgagcaagaa-tgagatacttcatttaaagcggtgaatgcagtac-ctcggcaA--------------------TCACCAAAAA s panTro5.chr2A 110125765 98 - 111504155 gaacactggaaaattactcatcacagtcattattcgtgagcaagaa-tgagatactccatttaaagtggtgaatgcagtac-ctcggcaA--------------------TCACCAAAAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1336917 98 + 114371477 gaacactggaaaattactcatcacagtcattattcgtgagcaagaa-tgagatactccatttaaagtggtgaatgcagtac-ctcggcaA--------------------TCACCAAAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362804 97 + 1464242 gaacact-gaaaattactcatcacagtcattattcgtgagcaagaa-tgagatactccatttaaagcggtgaatgcagtac-ctcggcaA--------------------TCACCAAAAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1087289 98 + 81552678 gaacactggaaaattactcatcacagtcattattcatgagcaagaa-tgagatactccatttaaagcggtgaatgcagtac-cccggcaA--------------------TCACCAAAAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1418364 98 + 108979918 gaacgctggaaaattacccatcacaatcgttattcatgagcaagaa-tgagatactccatttaaagcagcgaatgcagtgc-cctggcaa--------------------acaCACACAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390745 98 - 111193037 gaacgctggaaaattacccatcacaatcgttattcatgagcaagaa-tgagatactccatttaaagcagcgaatgcagtgc-cctggcaa--------------------acaCACACAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1419216 98 + 3644372 gaacgctggaaaattacccatcacaatcgttattcatgagcaagaa-tgagatactccatttaaagcagcgaatgcggtgc-cctggcaa--------------------acaCACACAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372703 118 - 10304083 gaacgctggaaaattacccatcacaatcgttattcatgagcaagaa-tgagatactccatttaaagcagcgaatgcagtgc-cctggcaAacacacacacacacacacacacacacacac i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1448442 98 - 107702431 GAACACTGGGAAATTGCCCATCACAATCGTTATTCATGAGCAAGAA-TGAGATACTCCATTGAAAGCAGCGAATGCAGTGC-CCTGGCAA--------------------acacgcacac i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926587 98 - 2200435 gaacgctggaaaattacccatcacaatcgttattcatgagcaagaa-tgagatactccatttaaagcagcgaatgcagtgc-cctggcaA--------------------acacacacac i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1366707 98 - 13651311 gaacactggaaaattacccattacaatcgttattcatgagcaagaa-tgagatactccatttaaagcaatgaatgcagtgc-cctggcaA--------------------acacacacac i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1213853 96 - 7082604 TAACACCAGAAAATTACCCATTACCATCATTATTCGTGAGCAAGAA-TGAGATGCTCCATTTAAAGCTGCAAGTGCAATGC-CCTGGCAA--------------------ACACTGAA-- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1301739 98 + 1864846 TAACACTGGAAAATTACCCATCACCATCATTATTCATGAGCAAGAA-TGAGATACTCCATTTAAGGCTGAAAGTGCAGTGC-TCTGGCAA--------------------ACACTAAAGA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 94542 98 + 287728 TAACACTggaaaattacccatcaccaccgttattcgtgagcaagaa-tgagatactccatttaaagctgcaagtgcagtgc-cctggcaa--------------------acactaaAAA i aotNan1.NW_018513311v1 C 0 I 2 s mm10.chr12 89998026 65 - 120129022 -----------GACTAC-CACTACAGGTATTCCTGGTGAGCATTAA-T--------------AACTTGGGAATTGTGTTTC-CATGACAA--------------------CTA------- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1682288 100 + 4416731 gaaaattggaaacttattcatcatagttataatctgtgagcattaagtgagatactccatttaaagtatcatgtgccctgtaaCTGGTCA--------------------TTACTGGGAA i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 931936 929 + 5252280 I e calJac3.chr14 1364726 3082 - 108792865 I a score=-17028.000000 s hg38.chr2_KI270774v1_alt 99373 3 + 223625 ACA s panTro5.chr2A 110125863 3 - 111504155 ACA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1337015 2 + 114371477 AC- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362901 2 + 1464242 AC- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1087387 3 + 81552678 ATA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1418462 1 + 108979918 A-- i rheMac8.chr13 C 0 I 1 s macFas5.chr13 1390843 1 - 111193037 A-- i macFas5.chr13 C 0 I 1 s macNem1.NW_012011978v1 1419314 1 + 3644372 A-- i macNem1.NW_012011978v1 C 0 I 1 s cerAty1.NW_012000820v1 1372821 1 - 10304083 a-- i cerAty1.NW_012000820v1 C 0 I 1 s chlSab2.chr14 1448540 1 - 107702431 a-- i chlSab2.chr14 C 0 I 2 s manLeu1.NW_012103754v1 926685 1 - 2200435 a-- i manLeu1.NW_012103754v1 C 0 I 17 s colAng1.NW_012118821v1 1366805 1 - 13651311 a-- i colAng1.NW_012118821v1 C 0 I 2 s calJac3.chr14 1367808 1 - 108792865 a-- i calJac3.chr14 I 3082 C 0 s saiBol1.JH378218 1213949 1 - 7082604 A-- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1301837 1 + 1864846 A-- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 94642 1 + 287728 A-- i aotNan1.NW_018513311v1 I 2 C 0 s mm10.chr12 89998091 1 - 120129022 A-- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1682388 1 + 4416731 A-- i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 931936 929 + 5252280 I a score=9337.000000 s hg38.chr2_KI270774v1_alt 99376 4 + 223625 AAAA s panTro5.chr2A 110125866 4 - 111504155 AAAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1337017 4 + 114371477 AAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362903 4 + 1464242 AAAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1087390 4 + 81552678 TAAA i nomLeu3.chr19 C 0 C 0 s chlSab2.chr14 1448543 4 - 107702431 caca i chlSab2.chr14 I 2 I 23 s colAng1.NW_012118821v1 1366808 4 - 13651311 caca i colAng1.NW_012118821v1 I 2 I 21 s calJac3.chr14 1367809 4 - 108792865 caca i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213950 4 - 7082604 AAAA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1301838 4 + 1864846 GAAA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 94643 4 + 287728 AAAA i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 89998092 4 - 120129022 AGAA i mm10.chr12 C 0 I 1 s dasNov3.JH576208 1682389 1 + 4416731 ---A i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 931936 929 + 5252280 I e manLeu1.NW_012103754v1 926686 17 - 2200435 I e cerAty1.NW_012000820v1 1372822 1 - 10304083 I e macNem1.NW_012011978v1 1419315 1 + 3644372 I e macFas5.chr13 1390844 1 - 111193037 I e rheMac8.chr13 1418463 1 + 108979918 I a score=7060.000000 s hg38.chr2_KI270774v1_alt 99380 3 + 223625 ATA s panTro5.chr2A 110125870 3 - 111504155 ATA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1337021 3 + 114371477 ATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362907 3 + 1464242 ATA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1087394 3 + 81552678 ATT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1418464 3 + 108979918 ACA i rheMac8.chr13 I 1 C 0 s macFas5.chr13 1390845 3 - 111193037 ACA i macFas5.chr13 I 1 C 0 s macNem1.NW_012011978v1 1419316 3 + 3644372 ACA i macNem1.NW_012011978v1 I 1 C 0 s cerAty1.NW_012000820v1 1372823 3 - 10304083 aca i cerAty1.NW_012000820v1 I 1 C 0 s chlSab2.chr14 1448570 3 - 107702431 aca i chlSab2.chr14 I 23 C 0 s calJac3.chr14 1367813 3 - 108792865 ATT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213954 3 - 7082604 ATT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1301842 3 + 1864846 ATT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 94647 3 + 287728 ATT i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 89998097 2 - 120129022 AC- i mm10.chr12 I 1 C 0 s dasNov3.JH576208 1682390 3 + 4416731 ATA i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 931936 929 + 5252280 I e colAng1.NW_012118821v1 1366812 21 - 13651311 I e manLeu1.NW_012103754v1 926686 17 - 2200435 I a score=19520.000000 s hg38.chr2_KI270774v1_alt 99383 2 + 223625 AA s panTro5.chr2A 110125873 2 - 111504155 AA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1337024 2 + 114371477 AA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362910 2 + 1464242 AA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1087397 2 + 81552678 AA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1418467 2 + 108979918 AA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390848 2 - 111193037 AA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1419319 2 + 3644372 AA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372826 2 - 10304083 AA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1448573 2 - 107702431 ca i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926703 2 - 2200435 aA i manLeu1.NW_012103754v1 I 17 C 0 s calJac3.chr14 1367816 2 - 108792865 AA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213957 2 - 7082604 AA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1301845 2 + 1864846 AA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 94650 2 + 287728 AA i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 89998099 2 - 120129022 AA i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1682393 2 + 4416731 AG i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 931936 929 + 5252280 I e colAng1.NW_012118821v1 1366812 21 - 13651311 I a score=2816801.000000 s hg38.chr2_KI270774v1_alt 99385 283 + 223625 AATGGAGTCACAATATAAAGAACCTCAGGAAAAAGTGATTTTGCATCTTCCCAGAATAAATCAGTCACTCTATCACCTGGAACATGCTAGATGTTCAG----CCAATGGTTTGTAAATTAATTACTTTGTTATTTTATTTCATATTTAGT-AGGACCTGGTTGTATAAAACCAGAGTAAAACATGTTAGAAGTCAAG-AGCTAGTTCTGAGCAAGTT-GTGATACATGAGAGCTATTCAACAAAATATTT-AAAACTTTGTAACATGTTTTTTAATTT-TAAAAATCACATT s panTro5.chr2A 110125875 283 - 111504155 AATGGAGTCACAATATAAAGAACCTCAGGAAAAAGTGATTTTGCATCTTCCCAGAATAAATCAGTCACTCTGTCACCTGGAACATGCTAGATGTTCAG----CCAATGGTTTGTAAATTAATTACTTTGTTATTTTATTTCATATTTAGT-AGGACCTGGTTGTATAAAACCAGAGTAAAACATGTTAGAAGTCAAG-AGCTAGTTATGAGCAAGTT-GTTATACATGAGAGCTATTCAACAAAATATTT-AAAACTTTGTAACATGTTTTTTAATTT-TAAAAATCACATT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1337026 283 + 114371477 AATGGAGTCACAATATAAAGAACCTCAGGAAAAAGTGATTTTGCATCTTCCCAGAATAAATCAGTCACTCTGTCACCTGGAACATGCTAGATGTTCAG----CCAATGGTTTGTAAATTAATTACTTTGTTATTTTATTTCATATTTAGT-AGGACCTGGTTGTATAAAACCAGAGTAAAACATGTTAGAAGTCAAG-AGCTAGTTATGAGCAAGTT-GTTATACATGAGAGCTATTCAACAAAATATTT-AAAACTTTGTAACATGTTTTTTAATTT-TAAAAATCACATT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1362912 285 + 1464242 AATGGAGTCACAATATAAAGAACCTCAGGAAAAAGTGATTTTGCAGCTTCCCAGAATAAATCAGTCACTCTATCACCTGGAACATGCTAGATGTTCAG----CCAATGGTTTGTAAATTAATTACTTTGTTATTTTATTTCATATTTAGTAAGAACCTGGTTGTATAAAACCAGAGTAAAACATGTTAGAAGTCAAG-AGCTAGTTATGAGCAAGTT-GTTATACATGAGAGCTATTCAACAAAATATTTAAAAACTTTGTAACATGTTTTTTAATTT-TAAAAATCACATT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1087399 284 + 81552678 AATAGAGTCACAATATAAGGAACCTCAGGAAAAAGTGATTTTGCATCTTCCCAGAAGAAATCAATCACTCTATCACCTGGAACATGCTAGATGTTCAG----CCAATGGTTTGTAAATTAATTACTTTGTTATTTTATTTCATATTTAGTAAGGACCTGGTTGTATAAAACCATAGTAAAACACGTTAGAAGTCAAG-AGCTAGTTATGAGCAAGTT-ATTATACATGAGAGCTATTCAACAAAATATTT-AAAACTTTGCAACCTGTTTTTTAATTT-TAAAAATGACATT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1418469 284 + 108979918 AACTGAGTCACAATATAAAGAACCTCAGGAAAAAGTGATTTTGCATCTTCCAATAATAAATCAGTCACTCTATCACCCAGAACATGCTAGATGTTCAG----CCAATGGTTTGTAAATTAATTAATTTGTTATTTTATTTCATACTTACTAAGGACCTGGTTGTATAAAACCAAAGTAAAATATGTTAGAAATCAAG-AGCTAGTTATGAGCAAGTC-GTTATACATGGGAGCTGTTCAACGAAATATTT-AAAACTCTGTAACATGTTTTTTAATTT-AAAAAATCACATT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1390850 284 - 111193037 AACTGAGTCACAATATAAAGAACCTCAGGAAAAAGTGATTTTGCATCTTCCAATAATAAATCAGTCACTCTATCACCCAGAACATGCTAGATGTTCAG----CCAATGGTTTGTAAATTAATTAATTTGTTATTTTATTTCATACTTACTAAGGACCTGGTTGTATAAAACCAAAGTAAAATATGTTAGAAATCAAG-AGCTAGTTATGAGCAAGTC-GTTATACATGGGAGCTGTTCAACGAAATATTT-AAAACTCTGTAACATGTTTTTTAATTT-AAAAAATCACATT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1419321 284 + 3644372 AACTGAGTCACAATATAAAGAACCTCAGGAAAAAGTGATTTTGCATCTTCCAATAATAAATCAGTCACTCTATCACCCAGAACATGCTAGATGTTCAG----CCAATGGTTTGTAAATTAATTAATTTGTTATTTTATTTCATACTTACTAAGGACCTGGTTGTATAAAACCAAAGTAAAATATGTTAGAAATCAAG-AGCTAGTTATGAGCAAGTC-GTTATACATGGGAGCTGTTCAACGAAATATTT-AAAACTCTGTAACATGTTTTTTAATTT-AAAAAATCACATT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1372828 285 - 10304083 AACTGAGTCACAATATAAAGAACCTCAGGAAAAAGTGATTTTGCATCTTCCAATAATAAATCAGTCACTCTATCACCCAGAACATGCTAGATGTTCAG----CCAATGGTTTGTAAATTAATTAATTTGTTATTTTATTTCATACTTACTAAGGACCTGGTTGTATAAAACCAAAGTAAAATATGTTAGAAATCAAG-AGCTAGTTATGAGCAAGTC-GTTATACATGGGAGCTGTTCAACGAAATATTT-AAAACTCTGTAACATGTTTTTTAATTTAAAAAAATCACATT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1448575 284 - 107702431 cacTGAGTCACAATATAAAGAACCTCAGGAAAAAGTGATTTTGCAAATTCCAAGAATAAATCAGTCACTCTATCACCCAGAACATGCTAGATGTTCAG----CCAATGGTTTGTAAATTAATTAATTTGTTATTTTATTTCATACTTATTAAGGACCTGGTTGTATAAAACCAAAGTAAAACATATTAGAAGTCAAG-AGCTAGTTATGAGCAAGTC-GTTATACATGAGAGCTGTTCAATGAAATATTT-AAAACTCTGTAACATGTTTTTTAATTT-AAAAAATCACATT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926705 285 - 2200435 AACTGAGTCACAATATAAAGAACCTCAGGAAAAAGTGATTTTGCATCTTCCAATAATAAATCAGTCACTCTATCACCCAGAACATGCTAGATGTTCAG----CCAATGGTTTGTAAATTAATTAATTTGTTATTTTATTTCATACTTACTAAGGACCTGGTTGTATAAAACCAAAGTAAAATATGTTAGAAATCAAG-AGCTAGTTATGAGCAAGTC-GTTATACATGGGAGCTGTTCAACGAAATATTT-AAAACTCTGTAACATGTTTTTTAATTTAAAAAAATCACATT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1366833 284 - 13651311 aACTGAGTCACAATATAAAGAACCTCAGGAAAAAGTGATTTTGCATCTTCCAAGATTAAATCAGTCTCTCTATCACCCAGAACATGCTAGATGTTCAG----CCAATGGTTTGTAAATTAATTAATTTGTTATTTTATTTCATACTTACTAAGGACCTGGTTGTATAAAACCAAAGTAAAACATGTTAGAAGTCAAG-AGCTAGTTATGAGCAAGTC-GTTATACATGAGAGCTATTCAACGAAATAGTT-AAAACTCTGTAACATGTTTTTTAATTC-AAAAAATCACATT i colAng1.NW_012118821v1 I 21 C 0 s calJac3.chr14 1367818 281 - 108792865 ATCAGAGTCACAGTATCAAGAACCTCAGGAAAAAGTGATTCTGCGTCTTCCCAGAACAAATCGGTCACTCTGTCACCCAGAACATGCTAGGTGCTCAG----CCAGTGGTTTGTAAATTAATTAC--GGTTATTTTATTTCATATGTATTAAGGATCTGAATGGATAAAACCACAGTAAAGCATGTTAGAAGTCAGG-AGCTAGTTAGGAGCAAGTC-GTTATACTTGAGAGCTACTCAACAAAATATTT-AAAACTTTGTAACGTG-TTTTTAATTT-TAAAAATCACATT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1213959 281 - 7082604 ATCAGAGTCACAATATCAAGAACCTCAGGAAAAAGTGATTCTGCATCTTCCCAGAATAAATCAATCACTCTGTCACCCAGAACATGCCAGGTGCTCAG----CCAGTGGCTTGTAAATTAATTCC--TGTTATTTTACATCATATGTATTAAGGGTCTGAGTGTATAAAACCATAGTAAAGCATGTTAGAAGTCAAG-AGCTAGTTATGAGCAAGTT-GTTATACTTGAGAGCTACTCAACAAAATACTT-AAAACTTTATAACATG-TTTTTAATTT-TAAAGATCATATT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1301847 281 + 1864846 ATCAGAGTCACAATATCAAGAACCTCAGGAAAAAGTGATTCTGCATCTTCCCAGATTAAATCAGTCACTCTGTCACCCAGAACATGCCAGGTGCTCAG----CCAGTGGTTTGTAAATTAATTAC--TGTTATTTTATTTCATATGTATTAAGGATCTGGATATATAAAACCATAGTAAAGCATGTTAGAAGTCAGG-AGCTAGTTATGAGCAAGTC-GTTGTACTTGAGAGCTACTCAAAAAAATATTT-AAAACTTTGTAACATG-TTTTTCATTT-TAAAAATCACATT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 94652 280 + 287728 ATCAGAGTCACAATATCATGAATCTCAGGAAAAAGTGATTCTGTATCTTCCCAGAATAAATCAGCC-CTCCGTCACCCAGAACATGCCAGGTGCTCAG----CCAGTGGTTTGTGAATCAGTTAC--TGTTATTTTATTTCATATGTATTAAGGATCTGGATGTATAAAACCAGAGTAAAGCATGTTAGAAGTCAGG-AGCTAGTTATGATCAAGTC-GTTATACCTGAGAGCTACTCAACAAAATATTT-AAAACTTTGTAACATG-TTTTTAATTT-TAAAAATCACATT i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 89998101 265 - 120129022 GAGGGGTTCTCCTTTTAA--ATCTCCAAGAAAACCTAAGTATCCCCATT-------TGTACCAATCCTTCTAACATCTGGAACATGACAGGTGTTCAGCACACCGAAGG-----AAATAAATCACTTTTTCCTTTTGTTCAATAGCTATCGAGACCCTAGAGGAATAAAGCAAGACTGAA--AAGATAGAGGTCGAG--TCTAGTCAAGAACTCGAT-ATTGCACCTGTGAGCTGTTCACAAAAACATCT-GCA------CAGTGTGGCTTTAAAGTT-TTGAAATGATATT i mm10.chr12 C 0 I 963 s dasNov3.JH576208 1682395 254 + 4416731 GACTGATTCAACTATTAAATTTTCTCAAATAAAAATAATTACATGTCTTCCCACAATAAATCAGTCATTCTAGTATCTGGTACACGATTTATGTTCAA----CAAATGTTTTGTGAAGTTATTAATCTGCCCCATTATTCCATATTTATTAAGGTCCTACATCTGTAAAATCATAATAATTAAAATTGTAAGTTATGTAGATGGTTGTGAAAAAATTGGTTAAGCATGAGAGCTATTCAATAAAGTA----AAGATAATCTA------------------------------ i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 931936 929 + 5252280 I a score=2475341.000000 s hg38.chr2_KI270774v1_alt 99668 281 + 223625 TAAAAAGCCATCAGGAATGCAGTAGCCACAGCTTTTGCTAAAACAGTTTTTAAAAATTATTTTTCCATATCTGGGAGATTTGACCTTTTCGTTTTGCTTAAACTTTTGGTTGACACATCACGAGTGCACAGGACAGCAGCTGACAACTGCCCCGCGTGCTGGG-CACATGCTTCTGCCTGC----TCCAATAT-TTCAAAGCTGACTTATTGTTTGCTTGAAATGTGAATGAGTTACTG-AAAAA-ATATTATGTGTCTCACAGTATTTCTATTTTACAGCCTTTAATA s panTro5.chr2A 110126158 281 - 111504155 TAAAAAGCCATCAGGAATGCAGTATCCACAGCTTTTGCTAAAACAGTTTTTAAAAATTATTTTTCCATCTCTGGGAGATTTGACCTTTTCGTTTTGCTTAAACTTTTGGTTGACACGTCACGAGTGCACAGGACGGCAGCTGACAACTGCCCCGCGTGCTGGG-CACATGCTTCTGCCTGC----TCCAATAT-TTCAAAGCTGACTTATTGTTTGCTTGAAATGTGAATGAGTTACTG-AAAAA-ATATTATGTGTCTCACAGTATTTCTATTTTACAGCCTTTAATA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1337309 281 + 114371477 TAAAAAGCCATCAGGAATGCAGTATCCACAGCTTTTGCTAAAACAGTTTTTAAAAATTATTTTTCCATCTCTGGGAGATTTGACCTTTTCGTTTTGCTTAAACTTTTGGTTGACACGTCATGAGTGCACAGGACGGCAGCTGACAACTGCCCCGTGTGCTGGG-CACATGCTTCTGCCTGC----TCCAATAT-TTCAAAGCTGACTTATTGTTTGCTTGAAATGTGAATGAGTTACTG-AAAAA-ATATTATGTGTCTCACAGTATTTCTATTTTACAGCCTTTAATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1363197 281 + 1464242 TAAAAAGCCATCAGGAATGCAGTATCCACAGCTTTTGCTAAAACAGTTTTTAAAAATTATTTTTCCATCTCTGAGAGATTTGACCTTTTCCTTTTGCTTAAACTTTTGGTTGACACGTCATGAGTGCACAGGACGGCAGCTGACAACTGCCCCGCGTGCTGGG-CACATGCTTCTGCCTGC----TCCAATAT-TTCAAAGCTGACTTATTGTTTGCTTGAAATGTGAATGAGTTACTG-AAAAA-ATATTATGTGTCTCACAGTATTTCTATTTTACATCCTTTAATA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1087683 282 + 81552678 TAAAAAGCCATCAGGAATGCAGTATCCACAGCTTTTGCTAAAACAGTTTTTAAAAATTATTTTTCCATCTCTGAGCGATTTGACCTTTTCCTCTTGCTTAAACTTTTGGTCAACACGTCACAAGTGCACAGGACGGCAGCTGACAGCTGCCCCGTGTGCTGGG-CACATCCTCCTGCCTGC----TTCATTAT-TTCAAAGCTGACTTATTATTTGCTTGACATGTGAATGAGTTACTG-AAAAAGACATTACATGTCTCACAGTGTTTCTACTGTACATCCTTTAATA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1418753 278 + 108979918 TAAAAAGCTATCAGGAATGCAATATCCACAACTTTTGCTAAAGCAGTTTTTAAAAATTATTTTTCCATCTCTGAGAGATTTGACCTTTTCCTTTTGCTTAAGCTTTTGGTTGATACGTCGCGAGTGCACAGGATGGCAGCTGCCGACTATGCCACACACTGGG-CACATCGTTCTGCCCGC----TCCAGTGT-TTCCACGCTGACTTATTATTTGCTTGACATGTAAATGAGTTACTG-AAAAA-ACAT---GTGTCTCACAGTACTTCAGTTTTCCATCCTTTAATA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1391134 278 - 111193037 TAAAAAGCTATCAGGAATGCAATATCCACAACTTTTGCTAAAGCAGTTTTTAAAAATTATTTTTCCATCTCTGAGAGATTTGACCTTTTCCTTTTGCTTAAGCTTTTGGTTGATACGTCGCGAGTGCACAGGATGGCAGCTGCCGGCTATGCCACACACTGGG-CACATCGTTCTGCCCGC----TCCAGTGT-TTCCACGCTGACTTATTATTTGCTTGACATGTAAATGAGTTACTG-AAAAA-ACAT---GTGTCTCACAGTACTTCAGTTTTCCATCCTTTAATA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1419605 278 + 3644372 TAAAAAGCTATCAGGAATGCAATATCCACAACTTTTGCTAAAGCAGTTTTTAAAAATTATTTTTCCATCTCTGAGAGATTTGACCTTTTCCTTTTGCTTAAACTTTTGGTTGATACGTCGCGAGTGCACAGGATGGCAGCTGCCGGCTATGCCACACACTGGG-CACATCGTTCTGCCCGC----TCCAGTGT-TTCCACGCTGACTTATTATTTGCTTGACATGTAAATGAGTTACTG-AAAAA-ACAT---GTGTCTCACAGTACTTCAGTTTTCCATCCTTTAATA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1373113 278 - 10304083 TAAAAAGCTATCAGGAATGCAATATCCACAACTTTTGCTAAAGCAGTTTTTAAAAATTATTTTTCCATCTCTGAGAGATTTGACCTTTTCCTTTTGCTTAAACTTTTGGTTGATACGTTGCGAGCGCACAGGACGGCAGCTGACGGCTACGCCACACACTGGG-CACATCGTTCTGCCCGC----TCCAATGT-TTCCACGCTGACTTATTATTTGCTTGACATGTAAATGAGTTACTG-AAAAA-ACAT---GTGTCTCACAGTACTTCAGTTTTCTATCCTTTAATA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1448859 278 - 107702431 TAAAAAGCTATCAGGAATGCAGCATCCACAACTTTTGCTAAAGCAGTTTTTAAAAATTATTTTTCCATCTCTGAGAGATTTGACCTTTTCCTTTTGCTTAAACTTTTGGTTGATACGTCGCGAGTGCACAGGACGGCAGCTGACGGCTACGCCACACACTGGG-CACATCGTTCTGCCCTC----TCCAATGT-TTCCAAGCTGACTTATTATTTGCTTGACATGTAAATGAGTTACTG-AAAAA-ACAT---GTGTCTCACAGTACTTCAGTTTTCCATCCTTTAATA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 926990 278 - 2200435 TAAAAAGCTATCAGGAATGCAATATCCACAGCTTTTGCTAAAGCAGTTTTTAAAAATTATTTTTCCGTCTCTGAGAGATTTGACCTTTTCCTTTTGCTTAAACTTTTGGTTGATACGTCGCGAGTGCACAGGACGGCAGCTGACGGCTACGCCACACACTGGG-CACATCGTTCTGCCCGC----TCCAGTGT-TTCCACGCTGACTTCTTATTTGCTTGACATGTAAATAAGTTACTG-AAAAA-ACGT---GTGTCTCACAGTACTTCAGTTTTCTATCCTTTAATA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1367117 278 - 13651311 TAAAAAGCTATCAGGAATGCAGTATCCACAACTTTTGCTAAAGCAGTTTTTAAAAATTATTTTTCCATCTCTGAGAGATTTGACCTTTTCCTTTTGCTTAAACTTTTGGTTGATACATCATGAGTGCACAGGACGGCAGCTGACAGCTACGCCACACACAGGG-CGCATCATTCTGCCCGC----TCCAACGT-TTCCAAGCTGACTTATCATTTGCTTGAAATGTAAATGAGTTACTG-AAAAA-ACAT---GTGTCTCACAGTACTTCAGTTTTCCGTCCTTTAATA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1368099 284 - 108792865 TAAAAAGCCACCAGGAATGAAGGATCCACAGCTTTTGCTAAAGCAGTTTTTTAAAATTATTTTTTCGTCTCTGAGACATTTGACGTTTTCCTTTTGCTTACACATTTGCTTAACACGTCACGAGCGCACAGCATGACAGCTG--GGTTTCTCCACACACTGGGACACATCCTTCTGCCTGCCCTCTCCAGTAT-TCCCAAGCTGACTTATTATTTATTTGAAATGTGAATGAGTTACTT-AAAAA-ATGTTATGTGTCTCACAGGCTTTCAATTTTACGTCCTTTAAGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1214240 275 - 7082604 TAAAAAGCCAACAGGAAAGCAGGATCCACAGCTTTTGCTAAAGCAGTTTTTTAAAATTATTTTTCCATCTCTGAGACATTTGACCTTTTCCT------------TTTGCTTAATACGTGGCGAGTGCACAGCATGACAGCTGACAGTTTCTCCACACACTGGGACACATCCTTCTGCCCGCCCACGCCAGTGT-TTCCAGGCTGATTTATTATTTATTTGAAATGTGAAGGAGTTACTTAAAAAA-ATGTTATGTGTCTCACAGGGTTTCAATTTTACATCCTTTGAGA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1302128 286 + 1864846 TAAAAAGCCATCAGGAAGGCAGGATCCACAGCTTTTGCTAAAGCATTTTTTTAGAATTATTTTTCCATCTGTGAGACATTTGACCTTTTCCTTTTGCTTACACGTTTGCTTAATACGTGACGAGTGCACAGCATGACAGCTGACAGTTTCTCTGCACACTGGGACACATCCTTCTGCGGGCCCATGCCAATGT-TTCCAAGCTGACTTGTTATTTATTTGAAATGTGAAGGAGTCACAT-AAAAA-ATGTTATGTGTCTCACAGGGTTTCAATTTTACATCCTTTAAGA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 94932 285 + 287728 TAAAAAGCCAACAGGAATGCAGGATCCACAGCTTTTGCTAAAGCAGTTTTTTAAAATTATTTTTCCATCTCTGAGACGTTTGACCTTTTCCTTTTGCTTACACGTTTGCGTGACACATCCCGAGTGCACAGCATGACGGCTGACAGTTTCTCCGCACAGCGGGACGCATCCTTCTGCCCGCCCACTCCAATAT-TTCCAAGCTGACTTATTATTTATTTG-AATGTGAATGAGTTACTT-TAAAA-ATGTTATGTGTCTCACAGGGTTTCAATTTTACATCCTTTAAGA i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1682649 237 + 4416731 --------------------------------------TACATCATTTTT-----ATTATTTTCCTATCTCTGAGAGGTTTGCTCTTATTTCTCTGCTTAAATTTTCAGTAAATATATGAATAATGCACAATACAGCCCCTGGTAATAATAATGCACTTTGAA-GATAT--TTTTGTTCAT----TAGGGCACATTTGAAACTGGCTTACGACTTGCTTGCTTTTAAGATTACTAACTT-AGAAA-ATATTATTTGCCTCACAGTGTTTCAATTTTACATTATTTTATA i dasNov3.JH576208 C 0 I 5072 e mm10.chr12 89998366 963 - 120129022 I e otoGar3.GL873658 931936 929 + 5252280 I a score=3339585.000000 s hg38.chr2_KI270774v1_alt 99949 405 + 223625 GTTGTTTTGCAGCTTTAAATCTGTTTGGAAA---ATGATGCCCAATGACTGTGTGTGGGTTTATGTCACCTGTGCTCACAGAC-ATGTGAAGCAAAAACCTTGGCCTGCTCCCCAGCCTCTGTGCAGGACAAGCCAAAGAGCAGGCAGCGGCAGGGCCAAGAGGATCCAGGCTCCCCCTGGACCACACACGGT--CACC-GTAAGCACATGGTGCTC---------C-GGGGGGTCCTGCTTGGTGGGTGGCTCACC-CTTATGTGTCAGGCACCCATTTTATAGATCAAAACGTAGAGGTCTGGAAGTCTCAGAAGCAGCAAGGCTGTGGCCGCTCAGTCTCACAGTCTCACGTCCCAGGTCTTTACAGAGAACCAACACACATCCTCATACTT--GAAGCTCGATGATAAG---TACTCAGCGAAA s panTro5.chr2A 110126439 397 - 111504155 GTCGTTTTGCAGCTTTAAATCTGTTTGGAAA---ATGATGCCCAATGACTGTGTGTGGGTTTATGTCACCTGTGCTCACAGAC-ATGTGAAGCAAAAAACTTGGCCTGCTCCCCAGCCTCTGTGCAGGACAAGCCAAAGAGCAGGCAGTGGCAGGGCCAAGAGGATCCAGGCTTCCTCTGGACCACACACGGT--CACC-GTAAGCAGATGGTGCTC---------C-GGGGGGTCCTGCTTGGTGGGTGGCTCACC-CTTATGTGTCAGGCACCCATTTTACAGATCAAAACGTAGAGGTCTGGAAGTCTCAGAAGCAGCAAGGCTGTGGCCGCT--------CAGTCTCATGTCCCAGGTCTTTACAGAGAACCAACACACATCCTCATACTT--GAAGCTCGATGATAAG---TACTCAGCGAAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1337590 397 + 114371477 GTCGTTTTGCAGCTTTAAATCTGTTTGGAAA---ATGATGCCCAATGACTGTGTGTGGGTTTATGTCACCTGTGCTCACAGAC-ATGTGAAGCAAAAACCTTGGCCTGCTCCCCAGCCTCTGTGCAGGACAAGCCAAAGAGCAGGCAGCGGCAGGGCCAAGAGGATCCAGGCTTCCTCTGGACCACACACGGT--CACC-GTAAGCAGATGGTGCTC---------C-GGGGGGTCCTGCTTGGTGGGTGGCTCACC-CTTATGTGTCAGGCACCCATTTTACAGATCAAAACGTAGAGGTCTGGAAGTCTCAGAAGCAGCAAGGCTGTGGCCGCT--------CAGTCTCATGTCCCAGGTCTTTACAGAGAACCAACACACATCCTCATACTT--GAAGCTCGATGATAAG---TACTCAGCGAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1363478 396 + 1464242 GTTGTTTTGCAGCTTTAAATCTGTTTGGAAA---ATGACGCCCAATGACTGTGTGTGGGTTTATGTCACCTGTGCTCACAGAC-ATGTGAAGCAAAAACCTTGGCCTGCTCCCCAGCCTCTGTGCAGGACAAGCCAAAGAGCAGGCAGCGGCAGGGCCAAGAGGATCCAGGCTTCCTCTGGATCACACACGGT--CACC-GTAAGCAGATGGTGCTC---------C--GGGGGTCCTGCTTGGTGGGTGGTTCACC-CTTATGTGTCAGGCACCCATTTTACAGATCAAAACATAGAGGTCTGGAAGTCTCAGAAGCAGCAAGGCTGTGGCCGCT--------CAGTCTCACGTCCCAGGTCTTTACAGAGAACCAACACACATCCTCATACTT--GAAGCTCGATGATATG---TACACAGTGAAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1087965 403 + 81552678 GTGGTTTTGCAGCTTTAAATCTGTTTGGAAAACGATGATGCCTAATGACTGTGTGTGGGTTTGTGTCACCTGTGCTCACAGAC-ATGTGAAGCAAAAACCTTGGCCTGCTCCCCAGCCCCTGTGCAGGACAAGCCAAAGAGCAGGCAGTGGCAGGGCCAAGAGGATCCAGGCTCCCCCTGGACCACACAGGGT--CACC-ATAAGCAGATGGTGCTC---------C-AGGGGGTCCTGCTTGGTGGGTGGTTCACCGATTATGTGTCAGGCACCCATTTTACAGATCAAAACGTAGAGGTCTATAAGTCTCAGAAGCAGCGAGGCTGTGGCCACT--------CAGTCTCACGTCCCAGGTCTTTACAGAAAACCAACACACATCCTCATACTTCGGAAGCTTGATGATAAG---TACTCAGTGAAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1419031 411 + 108979918 GTTGTTTTGCAGCTTTAAATCCGTTTGGAAAATGATGATACCCGATGATTGCGTGTGGGTTTATGTCACCTGTGCTCACAGCC-ATGTGAAGCAAAAACCTTGGCCTGCTCCCCAGCCTCTGTGCAGGACAAGCCAAAGAGCAGCCAGTGGCAGGGCCAAGAGGATCCAGGCTTCCCC-GGACCACACATGGTCACACC-ATAAGCAGATGGTGCCCGGGGGGTCCC-GGGGGGTCCTGCTTGGTGGGTGGCTCACCCATTATGTGTCAGGCACCCCTTTTATGGATCAAAACATAGAAGTCTGGAAGTCTCAGAAGCAGCAAGGCTGTGGCCACT--------CAGCCTCAAGCCCCAGGTCTTTACAGAGAACCAACACACATCCTCATACTT--GAAGCTTGATGATAAG---TACTCAGTGAAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1391412 411 - 111193037 GTTGTTTTGCAGCTTTAAATCCGTTTGGAAAATGATGATACCCGATGATTGCGTGTGGGTTTATGTCACCTGTGCTCACAGCC-ATGTGAAGCAAAAACCTTGGCCTGCTCCCCAGCCTCTGTGCAGGACAAGCCAAAGAGCAGCCAGTGGCAGGGCCAAGAGGATCCAGGCTTCCCC-GGACCACACATGGTCACACC-ATAAGCAGATGGTGCCCGGGGGGTCCC-GGGGGGTCCTGCTTGGTGGGTGGCTCACCCATTATGTGTCAGGCACCCCTTTTATGGATCAAAACGTAGAAGTCTGGAAGTCTCAGAAGCAGCAAGGCTGTGGCCACT--------CAGCCTCAAGTCCCAGGTCTTTACAGAGAACCAACACACATCCTCATACTT--GAAGCTTGATGATAAG---TACTCAGTGAAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1419883 411 + 3644372 GTTGTTTTGCAGCTTTAAATCCGTTTGGAAAATGATGATACCCGATGATTGCGTGTGGGTTTATGTCACCTGTGCTCACAGCC-ATGTGAAGCAAAAACCTTGGCCTGCTCCCCAGCCTCTGTGCAGGACAAGCCAAAGAGCAGCCAGTGGCAGGGCCAAGAGGATCCAGGCTTCCCC-GGACCACACATGGTCACACC-ATAAGCAGATGGTGCCCGGGGGGTCCC-GGGGGGTCCTGCTTGGTGGGTGGCTCACCCATTATGTGTCAGGCACCCCTTTTATGGATCAAAACGTAGAAGTCTGGAAGTTTCAGAAGCAGCAAGGCTGTGGCCACT--------CAGCCTCAAGTCCCAGGTCTTTACAGAGAACCAACACACATCCTCATACTT--GAAGCTTGATGATAAG---TACTCAGTGAAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1373391 409 - 10304083 GTTGTTTTGCAGCTTTAAATCTGTTTGGAAAATGATGATACCCGATGATTGCGTGTGGGTTTATGTCACCTGTGCTCACAGCC-ATGTGAAGCAAAAACCTTGGCCTGCTCCCCAGCCTCTGTGCAGGACAAGCCAAACAGCAGCCAGTGGCAGGGCCAAGAGGATCCAGGCTTCCCC-GGACCACACATGGT--CACC-ATAAGCAGATGGTGCCCGGGGGGTCCC-GGGGGGTCCTGCTTGGTGGGTGGCTCACCCATTATGTGTCAGGCACCCCTTTTATGGATCAAAACGTAGAAGTCTGGAAGTCTCAGAAGCAGCAAGGCTGTGACCACT--------CAGCCTCAAGTCCCAGGTCTTTACAGAGAACCAACACACATCCTCATACTT--GAAGCTTGATGATAAG---TACTCAGTGAAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1449137 409 - 107702431 GTTGTTTTGCAGCTTTAAATCCGTTTGGAAAATGATGATACCCAATGATTGCGTGTGGGTTTATGTCACCTATGCTCACAGCC-ATGTGAAGCAAAAACCTTGGTCTGCTCCCCAGCCTCTGTGCAGGACAAGCCAAAGAGCAGCCAGTGGCAGGGCCGAGAGGATCCAGGCTTCCCC-GGACCACACATGGT--CACC-ATAAGCAGATGGTGCCCGGGGGGTCCC-GGGGGGTCCTGCTTGGTGGGTGGCTCACCCATTATGTGTCAGGCACCCCTTTTACGGATCAAAGCGTAGAGGTCTGGAAGTCTCAGAAGCAGCAAGGCTGTGGCCACT--------CAGCCTCAAGTCCCAGGTCTTCACAGAGAACCAACACACATCCTCATACTT--GAAGCTTGATGATAAG---TACTCAGTGAAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 927268 410 - 2200435 GTTGTTTTGCAGCTTTAAATCCGTTTGGAAAATGATGATACCCGATGCTTGCGTGTGGGTTTATGCCACCTGTGCTCACAGCC-ATGTGAAGCAAAAACCTTGGCCTGCTCCCCAGCCTCTGTGCAGGACAAGCCAAAGAGCAGCCAGTGGCAGGGCCAAGAGGATCCAGGCTTCCCC-GGACCACACATGGTCACACC-ATAAGCAGATGGTGCCCGGGGGGTCCC-GGGGGGTCCTGCTTGGTGGGTGGCTCACCCATTATGTGTCAGGCACCCCTTTTATGGATCAAAACGTAGAGGTCTGGAAGTCTCAGAAGCAGCAAGGCTGTGGCCACT--------CAGCCTCAAGTCCCAGGTCTTTACAGAGAACC-ACACACATCCTCATACTT--GAAGCTTGATGATAAG---TACTCAGTGAAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1367395 383 - 13651311 GTTGTTTTGCAGCTTTAAATCCGTTTGGAAATTGATGACACCCGATGATGGTGTGTGGGTTTATGTCACCTGTGCTCACAGCC-ATGTGAAGCAAGACCCTTGGCCTGATCCCCAGCCTCTGTGCAGGACAAGCCAAAGAGCAGCCAGTGGCAGGGCCAAGAGGATCCAGGCTCCCCC-GAACCACACATGGT--CACC-ATAAGCAGATGGTGCTCCGG-------------------------GGGTGGCTCACCCATTATGTGTCAGGCACCCCTTTT-CGGATCAAAACGTAGAGGTCTGGAAGTCTCAGAAGCAGCAAGGCTGTGGCCACT--------CAGCCTCAAGTCCCAGGTCTTTACAGAGAACCAACACACATCCTCATACTT--GAAGCTCGATGATAAG---TACTCAGTGAA- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1368383 361 - 108792865 GTTGTTTTGCAGTTTTAAATTCATTTGGAAA---ATGATGCCCAGTGAC------TGTGTTTATGACACCTGTGCTCACAGATTCTGTGAAGCAAAAGCCTCGGCCTGCTCCCCAGCCTCTGTGC------------------------GGCAGGGCCACGAGGACCCCGG-TTCCCC-AGGCCATGTACGGT--CACCTGTAAGCAGACACTGCTC---------C-CAGGGGTCCTGCTTGGCAGGT-GCTTGCCCAGGATTTGTCAGGCAcccattttacagatcaaaacatagaggtctggagtgctcagaagtggcggggctgtggtcact--------cagcCTCACATCCCAGG-CTTCACAGAGAACCAGCACTCATCCTCATACCT--GAAG-----TGGTAAG---TGCTCAGTGAGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1214515 363 - 7082604 GTTGTTTTGCAGTTTTAAATTCATTTGGAAAGTGATGACGCCCAGTGAT---GTGTGTGTTTATGACACCTGTGCGCACAGACTCTGTGAAGCAAAAGCCTTGGCCTGCTCCCCAGCCTCTGTGT------------------------GGCAGGG-GACGAGGACCCTGG-TTCCCC-AGGCCACGTGCAGT--CACCTGTAAGCAGACAGTGCTC---------CTCAGGGGTCCTGCTTGGAAAGTGGCTTGCCCA-----------GTACCCATTTTACAGATCAAAACAGAGAGGTCTGGAGTGCTCAGAAGTGGCAAGACTGTGTTCACT--------CAGCCTCACGTCCCAGGTCTTCACAGAGAACCAACACTCATCCTCGTACTT--GAAGCGTGATGATAAG---TGCTCAGTGAGA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1302414 380 + 1864846 GTTGTTTTACAGTTTTAAATTCGTTTGGAAAATGATGATGCCCAGTGACTA-TTGTGTGTTTATGACACCTGTGCTCACAGACTCTGTGAAGCAAAAGCCTCAGCCTGCTGCCCAGCCTCTGCAC------------------------GGCAGGGCCACGAGGACCCCGG-TTCCCC-AGGCCACGTGCGGT--CACCTGTAAGCAGACAGTGCTC---------CACAGGGGTCCTGCTTGGCAGGTGGCTTGCCcagtatttgtcaggcacccattttacagatcaaaacatagaggtcaggagtgctcagaagtggcaaggctgtggtcact--------cagcCTCACGTCCCAGATCTTCACAGAGAGCCAACATTCATCCTCATACTT--GAACTGTGATGATAAGTGCTGCTCAGTGAGA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 95217 375 + 287728 GTTGTTTTGCAGTTTTAAATTCGTTTGGAAAATGCTGATGCCCAGTGATTATGTGTGTGTTTATGGCACCTGTGCTCACAGACTCTGGGAAGCAAAAGCCTCAGCCTGCTCCCCAGCCTCTGTGC------------------------GGCAGGGCCACGAGGACCCCGG--TCCCC-AGGCCACGT--GGT--CACCTGTAAGCAGACAGCGCTC---------CGCAGGGGTCCTGCTTGGCAGGCGACTTGCCCAGTATTTGTCAGGCACCCATTTTACAGATCAAAGCATAGAGGTCTGCAGTGCTCAGAAGTGGCAAGGCTGTGGTCACT--------CAGTCTCACGTCCCAGGTCTTCACAGAGAACCAACACTCATCCGCACACTT--GAAGCGTGATGATAAG---TGCTCAGTGAGA i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89998366 963 - 120129022 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1682886 5072 + 4416731 I a score=5730.000000 s hg38.chr2_KI270774v1_alt 100354 7 + 223625 AGTATCA s panTro5.chr2A 110126836 7 - 111504155 AGTATCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1337987 7 + 114371477 AGTATCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1363874 7 + 1464242 AGTATCC i gorGor5.CYUI01015607v1 C 0 I 86 s colAng1.NW_012118821v1 1367778 7 - 13651311 AGTATCA i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 95592 0 + 287728 C e mm10.chr12 89998366 963 - 120129022 I e saiBol1.JH378218 1214878 0 - 7082604 C e cebCap1.NW_016107827v1 1302794 0 + 1864846 C e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1682886 5072 + 4416731 I e calJac3.chr14 1368744 0 - 108792865 C e manLeu1.NW_012103754v1 927678 0 - 2200435 C e chlSab2.chr14 1449546 0 - 107702431 C e cerAty1.NW_012000820v1 1373800 0 - 10304083 C e macNem1.NW_012011978v1 1420294 0 + 3644372 C e macFas5.chr13 1391823 0 - 111193037 C e rheMac8.chr13 1419442 0 + 108979918 C e nomLeu3.chr19 1088368 0 + 81552678 C a score=31167.000000 s hg38.chr2_KI270774v1_alt 100361 36 + 223625 GGCCAGTGCCGTGACTCACATCTGCAATCCCAACAC s panTro5.chr2A 110126843 36 - 111504155 GGCCAGTGCCGTGACTCACATCTGCAATCCCAACAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1337994 36 + 114371477 GGCCAGTGCCGTGACTCACATCTGCAGTCCCAACAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1363967 36 + 1464242 GGCCAGTGCCGTGACTCACATCTGCAGTCCCAACAC i gorGor5.CYUI01015607v1 I 86 C 0 s colAng1.NW_012118821v1 1367785 36 - 13651311 GGCCAGTGTCAtgactcacatctgatatcccaacac i colAng1.NW_012118821v1 C 0 I 1231 e aotNan1.NW_018513311v1 95592 0 + 287728 C e mm10.chr12 89998366 963 - 120129022 I e saiBol1.JH378218 1214878 0 - 7082604 C e cebCap1.NW_016107827v1 1302794 0 + 1864846 C e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1682886 5072 + 4416731 I e calJac3.chr14 1368744 0 - 108792865 C e manLeu1.NW_012103754v1 927678 0 - 2200435 C e chlSab2.chr14 1449546 0 - 107702431 C e cerAty1.NW_012000820v1 1373800 0 - 10304083 C e macNem1.NW_012011978v1 1420294 0 + 3644372 C e macFas5.chr13 1391823 0 - 111193037 C e rheMac8.chr13 1419442 0 + 108979918 C e nomLeu3.chr19 1088368 0 + 81552678 C a score=14.000000 s hg38.chr2_KI270774v1_alt 100397 6 + 223625 AGTATC s panTro5.chr2A 110126879 3 - 111504155 AGT--- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1338030 3 + 114371477 AGT--- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1364003 6 + 1464242 AGTATC i gorGor5.CYUI01015607v1 C 0 T 89 e aotNan1.NW_018513311v1 95592 0 + 287728 C e mm10.chr12 89998366 963 - 120129022 I e saiBol1.JH378218 1214878 0 - 7082604 C e cebCap1.NW_016107827v1 1302794 0 + 1864846 C e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1682886 5072 + 4416731 I e calJac3.chr14 1368744 0 - 108792865 C e colAng1.NW_012118821v1 1367821 1231 - 13651311 I e manLeu1.NW_012103754v1 927678 0 - 2200435 C e chlSab2.chr14 1449546 0 - 107702431 C e cerAty1.NW_012000820v1 1373800 0 - 10304083 C e macNem1.NW_012011978v1 1420294 0 + 3644372 C e macFas5.chr13 1391823 0 - 111193037 C e rheMac8.chr13 1419442 0 + 108979918 C e nomLeu3.chr19 1088368 0 + 81552678 C a score=47478.000000 s hg38.chr2_KI270774v1_alt 100403 86 + 223625 ATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGTATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGT s panTro5.chr2A 110126882 86 - 111504155 ATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGTATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1338033 86 + 114371477 ATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGTATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGT i panPan2.chr2A C 0 T 129 s gorGor5.CYUI01015607v1 1363920 86 + 1464242 ATCCGGCCAGTGCCGTGACTCACATCTGCAGTCCCAACACAGTATCCGGCCAGTGCCGTGACTCACATCTGCAGTCCCAACACAGT i gorGor5.CYUI01015607v1 T 89 C 0 e aotNan1.NW_018513311v1 95592 0 + 287728 C e mm10.chr12 89998366 963 - 120129022 I e saiBol1.JH378218 1214878 0 - 7082604 C e cebCap1.NW_016107827v1 1302794 0 + 1864846 C e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1682886 5072 + 4416731 I e calJac3.chr14 1368744 0 - 108792865 C e colAng1.NW_012118821v1 1367821 1231 - 13651311 I e manLeu1.NW_012103754v1 927678 0 - 2200435 C e chlSab2.chr14 1449546 0 - 107702431 C e cerAty1.NW_012000820v1 1373800 0 - 10304083 C e macNem1.NW_012011978v1 1420294 0 + 3644372 C e macFas5.chr13 1391823 0 - 111193037 C e rheMac8.chr13 1419442 0 + 108979918 C e nomLeu3.chr19 1088368 0 + 81552678 C a score=0.000000 s hg38.chr2_KI270774v1_alt 100489 3 + 223625 ATC e aotNan1.NW_018513311v1 95592 0 + 287728 C e mm10.chr12 89998366 963 - 120129022 I e saiBol1.JH378218 1214878 0 - 7082604 C e cebCap1.NW_016107827v1 1302794 0 + 1864846 C e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1682886 5072 + 4416731 I e calJac3.chr14 1368744 0 - 108792865 C e colAng1.NW_012118821v1 1367821 1231 - 13651311 I e manLeu1.NW_012103754v1 927678 0 - 2200435 C e chlSab2.chr14 1449546 0 - 107702431 C e cerAty1.NW_012000820v1 1373800 0 - 10304083 C e macNem1.NW_012011978v1 1420294 0 + 3644372 C e macFas5.chr13 1391823 0 - 111193037 C e rheMac8.chr13 1419442 0 + 108979918 C e nomLeu3.chr19 1088368 0 + 81552678 C e gorGor5.CYUI01015607v1 1364006 0 + 1464242 C e panPan2.chr2A 1338119 129 + 114371477 T e panTro5.chr2A 110126968 0 - 111504155 C a score=1623.000000 s hg38.chr2_KI270774v1_alt 100492 4 + 223625 ATCA s panTro5.chr2A 110126968 4 - 111504155 ATCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1337990 4 + 114371477 ATCA i panPan2.chr2A T 129 C 0 s gorGor5.CYUI01015607v1 1364006 4 + 1464242 ATCC i gorGor5.CYUI01015607v1 C 0 T 129 e aotNan1.NW_018513311v1 95592 0 + 287728 C e mm10.chr12 89998366 963 - 120129022 I e saiBol1.JH378218 1214878 0 - 7082604 C e cebCap1.NW_016107827v1 1302794 0 + 1864846 C e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1682886 5072 + 4416731 I e calJac3.chr14 1368744 0 - 108792865 C e colAng1.NW_012118821v1 1367821 1231 - 13651311 I e manLeu1.NW_012103754v1 927678 0 - 2200435 C e chlSab2.chr14 1449546 0 - 107702431 C e cerAty1.NW_012000820v1 1373800 0 - 10304083 C e macNem1.NW_012011978v1 1420294 0 + 3644372 C e macFas5.chr13 1391823 0 - 111193037 C e rheMac8.chr13 1419442 0 + 108979918 C e nomLeu3.chr19 1088368 0 + 81552678 C a score=15393.000000 s hg38.chr2_KI270774v1_alt 100496 28 + 223625 GGCCAGTGCCGTGACTCACATCTGCAAT s panTro5.chr2A 110126972 28 - 111504155 GGCCAGTGCCGTGACTCACATCTGCAAT i panTro5.chr2A C 0 T 129 s panPan2.chr2A 1337994 28 + 114371477 GGCCAGTGCCGTGACTCACATCTGCAGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1363881 28 + 1464242 GGCCAGTGCCGTGACTCACATCTGTAAT i gorGor5.CYUI01015607v1 T 129 C 0 e aotNan1.NW_018513311v1 95592 0 + 287728 C e mm10.chr12 89998366 963 - 120129022 I e saiBol1.JH378218 1214878 0 - 7082604 C e cebCap1.NW_016107827v1 1302794 0 + 1864846 C e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1682886 5072 + 4416731 I e calJac3.chr14 1368744 0 - 108792865 C e colAng1.NW_012118821v1 1367821 1231 - 13651311 I e manLeu1.NW_012103754v1 927678 0 - 2200435 C e chlSab2.chr14 1449546 0 - 107702431 C e cerAty1.NW_012000820v1 1373800 0 - 10304083 C e macNem1.NW_012011978v1 1420294 0 + 3644372 C e macFas5.chr13 1391823 0 - 111193037 C e rheMac8.chr13 1419442 0 + 108979918 C e nomLeu3.chr19 1088368 0 + 81552678 C a score=53808.000000 s hg38.chr2_KI270774v1_alt 100524 97 + 223625 CCCAACACAGTATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGTATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGT s panTro5.chr2A 110126871 97 - 111504155 CCCAACACAGTATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGTATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGT i panTro5.chr2A T 129 T 129 s panPan2.chr2A 1338022 97 + 114371477 CCCAACACAGTATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGTATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1363909 97 + 1464242 CCCAACACAGTATCCGGCCAGTGCCGTGACTCACATCTGCAGTCCCAACACAGTATCCGGCCAGTGCCGTGACTCACATCTGCAGTCCCAACACAGT i gorGor5.CYUI01015607v1 C 0 C 0 e aotNan1.NW_018513311v1 95592 0 + 287728 C e mm10.chr12 89998366 963 - 120129022 I e saiBol1.JH378218 1214878 0 - 7082604 C e cebCap1.NW_016107827v1 1302794 0 + 1864846 C e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1682886 5072 + 4416731 I e calJac3.chr14 1368744 0 - 108792865 C e colAng1.NW_012118821v1 1367821 1231 - 13651311 I e manLeu1.NW_012103754v1 927678 0 - 2200435 C e chlSab2.chr14 1449546 0 - 107702431 C e cerAty1.NW_012000820v1 1373800 0 - 10304083 C e macNem1.NW_012011978v1 1420294 0 + 3644372 C e macFas5.chr13 1391823 0 - 111193037 C e rheMac8.chr13 1419442 0 + 108979918 C e nomLeu3.chr19 1088368 0 + 81552678 C a score=0.000000 s hg38.chr2_KI270774v1_alt 100621 3 + 223625 ATC e aotNan1.NW_018513311v1 95592 0 + 287728 C e mm10.chr12 89998366 963 - 120129022 I e saiBol1.JH378218 1214878 0 - 7082604 C e cebCap1.NW_016107827v1 1302794 0 + 1864846 C e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1682886 5072 + 4416731 I e calJac3.chr14 1368744 0 - 108792865 C e colAng1.NW_012118821v1 1367821 1231 - 13651311 I e manLeu1.NW_012103754v1 927678 0 - 2200435 C e chlSab2.chr14 1449546 0 - 107702431 C e cerAty1.NW_012000820v1 1373800 0 - 10304083 C e macNem1.NW_012011978v1 1420294 0 + 3644372 C e macFas5.chr13 1391823 0 - 111193037 C e rheMac8.chr13 1419442 0 + 108979918 C e nomLeu3.chr19 1088368 0 + 81552678 C e gorGor5.CYUI01015607v1 1364006 0 + 1464242 C e panPan2.chr2A 1338119 0 + 114371477 C e panTro5.chr2A 110126968 129 - 111504155 T a score=68625.000000 s hg38.chr2_KI270774v1_alt 100624 126 + 223625 ATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGTATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGTATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACAC s panTro5.chr2A 110126839 126 - 111504155 ATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGTATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGTATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACAC i panTro5.chr2A T 129 C 0 s panPan2.chr2A 1338119 126 + 114371477 ATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGTATTAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGTATCAGGCCAgtgccgtgactcacatctgcaatcccaacac i panPan2.chr2A C 0 T 215 s gorGor5.CYUI01015607v1 1364006 126 + 1464242 ATCCGGCCAGTGCCGTGACTCACATCTGCAGTCCCAACACAGTATCAGGCCAGTGCTGTGACTCACATCTGTAATCCCAAGACAGTATCCGGCCAgtgccgtgactcacatctgtaatcccaacac i gorGor5.CYUI01015607v1 C 0 T 172 e aotNan1.NW_018513311v1 95592 0 + 287728 C e mm10.chr12 89998366 963 - 120129022 I e saiBol1.JH378218 1214878 0 - 7082604 C e cebCap1.NW_016107827v1 1302794 0 + 1864846 C e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1682886 5072 + 4416731 I e calJac3.chr14 1368744 0 - 108792865 C e colAng1.NW_012118821v1 1367821 1231 - 13651311 I e manLeu1.NW_012103754v1 927678 0 - 2200435 C e chlSab2.chr14 1449546 0 - 107702431 C e cerAty1.NW_012000820v1 1373800 0 - 10304083 C e macNem1.NW_012011978v1 1420294 0 + 3644372 C e macFas5.chr13 1391823 0 - 111193037 C e rheMac8.chr13 1419442 0 + 108979918 C e nomLeu3.chr19 1088368 0 + 81552678 C a score=1692.000000 s hg38.chr2_KI270774v1_alt 100750 3 + 223625 AGT s panTro5.chr2A 110126965 3 - 111504155 AGT i panTro5.chr2A C 0 T 86 s panPan2.chr2A 1338030 3 + 114371477 AGT i panPan2.chr2A T 215 C 0 s gorGor5.CYUI01015607v1 1363960 3 + 1464242 AGT i gorGor5.CYUI01015607v1 T 172 C 0 e aotNan1.NW_018513311v1 95592 0 + 287728 C e mm10.chr12 89998366 963 - 120129022 I e saiBol1.JH378218 1214878 0 - 7082604 C e cebCap1.NW_016107827v1 1302794 0 + 1864846 C e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1682886 5072 + 4416731 I e calJac3.chr14 1368744 0 - 108792865 C e colAng1.NW_012118821v1 1367821 1231 - 13651311 I e manLeu1.NW_012103754v1 927678 0 - 2200435 C e chlSab2.chr14 1449546 0 - 107702431 C e cerAty1.NW_012000820v1 1373800 0 - 10304083 C e macNem1.NW_012011978v1 1420294 0 + 3644372 C e macFas5.chr13 1391823 0 - 111193037 C e rheMac8.chr13 1419442 0 + 108979918 C e nomLeu3.chr19 1088368 0 + 81552678 C a score=46008.000000 s hg38.chr2_KI270774v1_alt 100753 89 + 223625 ATCATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGTATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGT s panTro5.chr2A 110126882 86 - 111504155 ATCA---GGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGTATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGT i panTro5.chr2A T 86 T 129 s panPan2.chr2A 1338033 86 + 114371477 ATCA---GGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGTATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1363963 86 + 1464242 ATCC---GGCCAGTGCCGTGACTCACATCTGCAGTCCCAACACAGTATCCGGCCAGTGCCGTGACTCACATCTGCAGTCCCAACACAGT i gorGor5.CYUI01015607v1 C 0 C 0 e aotNan1.NW_018513311v1 95592 0 + 287728 C e mm10.chr12 89998366 963 - 120129022 I e saiBol1.JH378218 1214878 0 - 7082604 C e cebCap1.NW_016107827v1 1302794 0 + 1864846 C e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1682886 5072 + 4416731 I e calJac3.chr14 1368744 0 - 108792865 C e colAng1.NW_012118821v1 1367821 1231 - 13651311 I e manLeu1.NW_012103754v1 927678 0 - 2200435 C e chlSab2.chr14 1449546 0 - 107702431 C e cerAty1.NW_012000820v1 1373800 0 - 10304083 C e macNem1.NW_012011978v1 1420294 0 + 3644372 C e macFas5.chr13 1391823 0 - 111193037 C e rheMac8.chr13 1419442 0 + 108979918 C e nomLeu3.chr19 1088368 0 + 81552678 C a score=282.000000 s hg38.chr2_KI270774v1_alt 100842 3 + 223625 ATC s panPan2.chr2A 1338119 3 + 114371477 ATC i panPan2.chr2A C 0 C 0 e aotNan1.NW_018513311v1 95592 0 + 287728 C e mm10.chr12 89998366 963 - 120129022 I e saiBol1.JH378218 1214878 0 - 7082604 C e cebCap1.NW_016107827v1 1302794 0 + 1864846 C e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1682886 5072 + 4416731 I e calJac3.chr14 1368744 0 - 108792865 C e colAng1.NW_012118821v1 1367821 1231 - 13651311 I e manLeu1.NW_012103754v1 927678 0 - 2200435 C e chlSab2.chr14 1449546 0 - 107702431 C e cerAty1.NW_012000820v1 1373800 0 - 10304083 C e macNem1.NW_012011978v1 1420294 0 + 3644372 C e macFas5.chr13 1391823 0 - 111193037 C e rheMac8.chr13 1419442 0 + 108979918 C e nomLeu3.chr19 1088368 0 + 81552678 C e gorGor5.CYUI01015607v1 1364049 0 + 1464242 C e panTro5.chr2A 110126968 129 - 111504155 T a score=1122.000000 s hg38.chr2_KI270774v1_alt 100845 4 + 223625 ATCA s panTro5.chr2A 110126839 4 - 111504155 ATCA i panTro5.chr2A T 129 C 0 s panPan2.chr2A 1338122 1 + 114371477 ---A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1364049 4 + 1464242 ATCA i gorGor5.CYUI01015607v1 C 0 T 172 e aotNan1.NW_018513311v1 95592 0 + 287728 C e mm10.chr12 89998366 963 - 120129022 I e saiBol1.JH378218 1214878 0 - 7082604 C e cebCap1.NW_016107827v1 1302794 0 + 1864846 C e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1682886 5072 + 4416731 I e calJac3.chr14 1368744 0 - 108792865 C e colAng1.NW_012118821v1 1367821 1231 - 13651311 I e manLeu1.NW_012103754v1 927678 0 - 2200435 C e chlSab2.chr14 1449546 0 - 107702431 C e cerAty1.NW_012000820v1 1373800 0 - 10304083 C e macNem1.NW_012011978v1 1420294 0 + 3644372 C e macFas5.chr13 1391823 0 - 111193037 C e rheMac8.chr13 1419442 0 + 108979918 C e nomLeu3.chr19 1088368 0 + 81552678 C a score=67482.000000 s hg38.chr2_KI270774v1_alt 100849 122 + 223625 GGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGTATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGTATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACAC s panTro5.chr2A 110126843 122 - 111504155 GGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGTATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGTATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1338123 122 + 114371477 GGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGTATTAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGTATCAGGCCAgtgccgtgactcacatctgcaatcccaacac i panPan2.chr2A C 0 T 126 s gorGor5.CYUI01015607v1 1363881 122 + 1464242 GGCCAGTGCCGTGACTCACATCTGTAATCCCAACACAGTATCCGGCCAGTGCCGTGACTCACATCTGCAGTCCCAACACAGTATCCGGCCAGTGCCGTGACTCACATCTGCAGTCCCAACAC i gorGor5.CYUI01015607v1 T 172 C 0 e aotNan1.NW_018513311v1 95592 0 + 287728 C e mm10.chr12 89998366 963 - 120129022 I e saiBol1.JH378218 1214878 0 - 7082604 C e cebCap1.NW_016107827v1 1302794 0 + 1864846 C e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1682886 5072 + 4416731 I e calJac3.chr14 1368744 0 - 108792865 C e colAng1.NW_012118821v1 1367821 1231 - 13651311 I e manLeu1.NW_012103754v1 927678 0 - 2200435 C e chlSab2.chr14 1449546 0 - 107702431 C e cerAty1.NW_012000820v1 1373800 0 - 10304083 C e macNem1.NW_012011978v1 1420294 0 + 3644372 C e macFas5.chr13 1391823 0 - 111193037 C e rheMac8.chr13 1419442 0 + 108979918 C e nomLeu3.chr19 1088368 0 + 81552678 C a score=846.000000 s hg38.chr2_KI270774v1_alt 100971 3 + 223625 AGT s panTro5.chr2A 110126965 3 - 111504155 AGT i panTro5.chr2A C 0 T 129 s gorGor5.CYUI01015607v1 1364003 3 + 1464242 AGT i gorGor5.CYUI01015607v1 C 0 C 0 e aotNan1.NW_018513311v1 95592 0 + 287728 C e mm10.chr12 89998366 963 - 120129022 I e saiBol1.JH378218 1214878 0 - 7082604 C e cebCap1.NW_016107827v1 1302794 0 + 1864846 C e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1682886 5072 + 4416731 I e calJac3.chr14 1368744 0 - 108792865 C e colAng1.NW_012118821v1 1367821 1231 - 13651311 I e manLeu1.NW_012103754v1 927678 0 - 2200435 C e chlSab2.chr14 1449546 0 - 107702431 C e cerAty1.NW_012000820v1 1373800 0 - 10304083 C e macNem1.NW_012011978v1 1420294 0 + 3644372 C e macFas5.chr13 1391823 0 - 111193037 C e rheMac8.chr13 1419442 0 + 108979918 C e nomLeu3.chr19 1088368 0 + 81552678 C e panPan2.chr2A 1338245 126 + 114371477 T a score=282.000000 s hg38.chr2_KI270774v1_alt 100974 3 + 223625 ATC s gorGor5.CYUI01015607v1 1364006 3 + 1464242 ATC i gorGor5.CYUI01015607v1 C 0 C 0 e aotNan1.NW_018513311v1 95592 0 + 287728 C e mm10.chr12 89998366 963 - 120129022 I e saiBol1.JH378218 1214878 0 - 7082604 C e cebCap1.NW_016107827v1 1302794 0 + 1864846 C e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1682886 5072 + 4416731 I e calJac3.chr14 1368744 0 - 108792865 C e colAng1.NW_012118821v1 1367821 1231 - 13651311 I e manLeu1.NW_012103754v1 927678 0 - 2200435 C e chlSab2.chr14 1449546 0 - 107702431 C e cerAty1.NW_012000820v1 1373800 0 - 10304083 C e macNem1.NW_012011978v1 1420294 0 + 3644372 C e macFas5.chr13 1391823 0 - 111193037 C e rheMac8.chr13 1419442 0 + 108979918 C e nomLeu3.chr19 1088368 0 + 81552678 C e panPan2.chr2A 1338245 126 + 114371477 T e panTro5.chr2A 110126968 129 - 111504155 T a score=43657.000000 s hg38.chr2_KI270774v1_alt 100977 83 + 223625 ATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGTATTAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACAC s panTro5.chr2A 110126839 83 - 111504155 ATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGTATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACAC i panTro5.chr2A T 129 C 0 s panPan2.chr2A 1338119 83 + 114371477 ATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACACAGTATTAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACAC i panPan2.chr2A T 126 C 0 s gorGor5.CYUI01015607v1 1364009 80 + 1464242 ---CGGCCAGTGCCGTGACTCACATCTGCAGTCCCAACACAGTATCAGGCCAGTGCTGTGACTCACATCTGTAATCCCAAGAC i gorGor5.CYUI01015607v1 C 0 C 0 e aotNan1.NW_018513311v1 95592 0 + 287728 C e mm10.chr12 89998366 963 - 120129022 I e saiBol1.JH378218 1214878 0 - 7082604 C e cebCap1.NW_016107827v1 1302794 0 + 1864846 C e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1682886 5072 + 4416731 I e calJac3.chr14 1368744 0 - 108792865 C e colAng1.NW_012118821v1 1367821 1231 - 13651311 I e manLeu1.NW_012103754v1 927678 0 - 2200435 C e chlSab2.chr14 1449546 0 - 107702431 C e cerAty1.NW_012000820v1 1373800 0 - 10304083 C e macNem1.NW_012011978v1 1420294 0 + 3644372 C e macFas5.chr13 1391823 0 - 111193037 C e rheMac8.chr13 1419442 0 + 108979918 C e nomLeu3.chr19 1088368 0 + 81552678 C a score=375395.000000 s hg38.chr2_KI270774v1_alt 101060 43 + 223625 AGTATCAGGCCAgtgccgtgactcacatctgcaatcccaacac s panTro5.chr2A 110126922 43 - 111504155 AGTATCAGGCCAGTGCCGTGACTCACATCTGCAATCCCAACAC i panTro5.chr2A C 0 T 80344 s panPan2.chr2A 1338202 43 + 114371477 AGTATCAGGCCAgtgccgtgactcacatctgcaatcccaacac i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1364089 43 + 1464242 AGTATCCGGCCAgtgccgtgactcacatctgtaatcccaacac i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1088368 43 + 81552678 AGTATCAGGCCAgtgccgtgactcacatctgtaatcccaacac i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1419442 43 + 108979918 AGTATCAGGCCAGTGCCAtgactcacatctgtaatcccaacac i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1391823 43 - 111193037 AGTATCAGGCCAGTGCCATTActcacatctgtaatcccaacac i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1420294 43 + 3644372 AGTATCAGGCCAGTGCCAtgactcacatctgtaatcccaacac i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1373800 43 - 10304083 AGTATCAGGCCAGTGCCAtgactcatatctgtaatcccaacac i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1449546 43 - 107702431 AGTATCAGGCCAGTGCCAtgactcacatctgtaatcccaacac i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 927678 43 - 2200435 AGTATCAGGCCAGTGCCAtgactcacatctgtaatcccaacac i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1368744 43 - 108792865 AGTATCAGGCCAGTGGggtggctcacacctgtaatcccaacac i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1214878 43 - 7082604 AGCATCAGGCCAGTGGggtggctcacacctgtcatcccaacac i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1302794 43 + 1864846 AGTATCAGGCCAGTGAggtggctcacacctgtaatcccaacac i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 95592 43 + 287728 AGTATCAGGCCAGTGGggtggctcacacctgtaaccccaacac i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89998366 963 - 120129022 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1682886 5072 + 4416731 I e colAng1.NW_012118821v1 1367821 1231 - 13651311 I a score=1678148.000000 s hg38.chr2_KI270774v1_alt 101103 258 + 223625 tttgggaggccgaggcgggaagatcacttgaggct----aggagttcaagacca-----gcctgaccaacatggcaaaaccccatctctactaaaaatac-aaaaaaaaat------tagctgggcgtggtggtgcccacctgtcatcccagctactcgggaggctgaggcacgagaatcagttgaacccaggaggtggaggttgca--gagtcgagatcacaccactgcactccagtctaggtgacagagtgagaatccatct------caaaaaaaaaaa s panPan2.chr2A 1338245 258 + 114371477 tttgggaggccgaggcgggaagatcacttgaggct----aggagttcaagacca-----gcctgaccaacatggcaaaaccccatctctactaaaaatac--aaaaaaaat------tagctgggcgtggtggtgcccacctgtcatcccagctactcgggaggctgaggcacgagaatcagttgaacccaggaggtggaggttgca--gagtcgagatcacaccactgcactccactctaggtgacagagtgagaatccatct-----acaaaaaaaaaaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1364132 256 + 1464242 tttgggaggccgaggc-ggaagatcacttgaggct----aggagttcaagacca-----gcctgaccaacatggcaaaaccccatctctactaaaaatac--aaaaaaaat------tagctgggcgtggtggtgcccacctgtcatcccagctactcgggaggctgaggcacgagaatcagttgaacccaggaggtggaggttgca--gagtcgagatcacaccactgcactccagtctaggtgacagagtgagaatccatct------caaaaaaaaaaa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1088411 251 + 81552678 --tgggaggctgaggcgggaaggtcacttgaggct----aggagttcaagacca-----gcctgaccaacatggcaaaaccccatctctactaaaaatacaaaaaaaaaat------tagctgggcgtggtggtgcccacctgtcatcccagctactc------cggaggcaggagaatcagttgaacccaggaggtggagtttgca--gagttgagatcacaccactgcactccagtctaggtgacagagtgaaaatctacct------caaaaaaaaaaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1419485 266 + 108979918 tttgggaggccgaggcaggaagatcacttgaggctaggaaggagtgcaagaccaggagtgcctgaccaacatggcaaatccccatctctactaaaaacgc--aaaaaaaataacaactagctggacgtggtggtacccacctgtcatcccagctacttgggaggccgaggcacaagaatcagttgaacccaggaggtggaggttgca--gagtcgagatcacatcactgcactccagcctaggtgacaaggtgagaatctatct------------aaaaaa i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1391866 262 - 111193037 tttgggaggccgaggcaggaagatcacttgaggctaggaaggagtgcaagacca-----gcctgaccaacatggcaaatccccatctctactaaaaacgc--aaaaaaaataacaactagctggacgtggtggtacccacctgtcatcccagctacttgggaggccgaggcacaagaatcagttgaacccaggaggtggaggttgca--gagtcgagatcacatcactgcactccagcctaggtgacaaggtgagaatctatct-----------aaaaaaa i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1420337 263 + 3644372 tttgggaggccgaggcaggaagatcacttgaggctaggaaggagttcaagacca-----gcctgaccaatatggcaaatccccatctctactaaaaacgc--aaaaaaaataacaactagctggacgtggtggtacccacctgtcatcccagctacttgggaggccgaggcacaagaatcagttgaacccaggaggtggaggttgca--gagtcgagatcacatcactgcactccagcctaggtgacaaggtgagaatctatct----------aaaaaaaa i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1373843 263 - 10304083 tttgggaggccgaggcaggaagatcacttgaggctaggaaggagttcaagacca-----gcctgaccaacatggcaaatccccatctctactaaaaacgc--aaaaaaaataacaactagctggacgtggtggtacccacctgtcatcccagctacttgggaggccaaggcacaagaatcagttgaacccaggaggtggaggttgca--gagtcgagatcacatcactgcactccagcctaggtgacaaggtgagaatctatct----------aaaaaaaa i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1449589 266 - 107702431 ttcgggaggccgaggcaggaagatcacttgaggctaggaaggagttcaagacca-----gcctgaccaacatggcaaatccccatctctactaaaaacgc-aaaaaaaaataacaactagctggacgtggtggtacccacctgtcatcccagctacttgggaggccgaggcacaagaatcagttgaacccaggaggtggaggttgcagtgagtcgagatcacatcactgcactccagcctagg-gacaaggtgagaatctatct---------aaaaaaaaa i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 927721 266 - 2200435 tttgggaggccgaggcaggaagatcacttgaggctaggaaggagttcaagacca-----gcctgaccaacatggcaaatccccatctctactaaaaacgc--aaaaaaaataacaactagctggacgtggtggtacccacctgtcatcccagctacttgggaggcggaggcacaagaatcagttgaacccaggaggtggaggttgcaatgagtccagatcacatcactgcactccagcctaggtgacaaagtgagaatctatct---------aaaaaaaaa i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1368787 248 - 108792865 tttgggg-gccgaggcaggaagatcacttgaggct----aggagttcaagacca-----gcctgaccaacatggcaaaaccccatctctactcaaaatac--aaaaacag-------tagctgggcatggtggtgcccatctgtcatcccagctactcaggaggcggaggcacgagaatcagtggaacccaggaggtggaggttgcaatgcgtggagatcatggcactgcactccagcctgggtgacagagtgagaatct---c------------aaagac i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1214921 262 - 7082604 tttggggagccgaggcgggaagatcccttgaggct----aggagttcaagacca-----gcctgaccaacatggcaaaaccccatctctactcaaaatacaaaaaaaaag-------tcgctggacatggtggtgtccatctgtcatcccagctactcaggaggctgaggtgcgagaatcagtggaaccca-gaggtggaggctgcagtgagtggggatcatgacactgcactccagccgaggtgacagagcgagagtct---cagagagagagagagagag i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1302837 239 + 1864846 tttggggggccgaggtgggaagatccctcgaggct----aggagttcaagacca-----ggctgaccaacatggcaaaaccccatctctactcaaa------------ag-------tagctggacatggtggtgtccatctgtcatcccagctactcaggaggctgaggcgcgagaatcagtggaacgcaggaggtggaggttgctgtgagtggagatcatgacactgcaccccagccgaggtgacagagtgagaatct---c------------aaagac i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 95635 245 + 287728 tttggggggccgaggtgggaagatcacttgaggct----aggagttcaagaccg-----gcctgaccaacatggcaaaaccccatctctactcaaaatac--aagaaaag-------taactggacatggtggtgaccatctgtcatcccagctactcaggaggctgaggcacgagaatcagtggaacccaggaggtggaggttgcagtgagtggagatcgtgacactgcactccagcctgggtgacagagtgagaatct---c------------ag---- i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 89998366 963 - 120129022 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1682886 5072 + 4416731 I e colAng1.NW_012118821v1 1367821 1231 - 13651311 I e panTro5.chr2A 110126965 80344 - 111504155 T a score=1040.000000 s hg38.chr2_KI270774v1_alt 101361 9 + 223625 -aaaaagaga- s panPan2.chr2A 1338503 9 + 114371477 -aaaGAGAGA- i panPan2.chr2A C 0 I 804 s gorGor5.CYUI01015607v1 1364388 9 + 1464242 -aaaaaaaaa- i gorGor5.CYUI01015607v1 C 0 I 2 s nomLeu3.chr19 1088662 8 + 81552678 -aaaaaaaa-- i nomLeu3.chr19 C 0 I 2 s rheMac8.chr13 1419751 7 + 108979918 -acagaga--- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1392128 7 - 111193037 -acagaga--- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1420600 7 + 3644372 -acagaca--- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1374106 7 - 10304083 -acagaga--- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1449855 7 - 107702431 -acagaga--- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 927987 7 - 2200435 -acagaga--- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1369035 7 - 108792865 -agagaga--- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1215183 7 - 7082604 -agagaga--- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1303076 5 + 1864846 ---agaga--- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 95880 5 + 287728 ---agaga--- i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1687958 9 + 4416731 AAAAAATA--A i dasNov3.JH576208 I 5072 C 0 e mm10.chr12 89998366 963 - 120129022 I e otoGar3.GL873658 931936 929 + 5252280 I e colAng1.NW_012118821v1 1367821 1231 - 13651311 I e panTro5.chr2A 110126965 80344 - 111504155 T a score=930774.000000 s hg38.chr2_KI270774v1_alt 101370 163 + 223625 gagagagaaaAA-AAGAAAAGCATCAGTCCTGG--ATAGAGTTTA-GGTTGTATCAACTTGCCTGCAAACTGTAGGAAGGTGAGAATAAGAAGGGAAAGATCTTGGCTGGTGCTCAGACTGGGTGGGT-GCAGGAGAGACTCTTG------------TTCCAGGGCAGGATCCCCT-AGGG--- s panPan2.chr2A 1339316 163 + 114371477 GAGAGAAAAAAA-AAGAAAAGCATCAGTCCTGG--ATAGAGTTTA-GGTTGTATCAACTTGTCTGCGAACTGTAGGAAGGTGAGAATAATAAGGGAAAGATCTCGGCCAGTGCTCAGACTGGGTGGGT-GCAGGAGAGACTCTTG------------TTCCAGAGCAGGATCCCGT-AGGG--- i panPan2.chr2A I 804 C 0 s gorGor5.CYUI01015607v1 1364399 163 + 1464242 GAGAGAGAGAGA-AAGAAAAGCATCAGTCCTGG--GTAGAGTTTA-GGTTGTATCAACTTGTCTGCAAACTGTAGGAAGGTGAGAATAAGAAGGGAAAGATCTCGGCCAGTGCTCAGACTGGGTGGGT-GCAGGAGAGACTCTTG------------TTCCAGAGCAGGATCCCCT-AGGG--- i gorGor5.CYUI01015607v1 I 2 C 0 s nomLeu3.chr19 1088672 162 + 81552678 GAGAGAGAGA-A-AAGAAAAGCATCAGTCCTGG--ATAGAGTTTA-GGTTGTATCGACTTGTCTGCAAACTGTAGGAAGGTGAGAATAAGAAGGGAAAGATCTCGGCCAGTGCTCAGACTGGGTGGGT-GCAGGAGAGACTCTTG------------TTCCAGAGCAGGGTCCCCT-AGGG--- i nomLeu3.chr19 I 2 C 0 s rheMac8.chr13 1419758 155 + 108979918 --------gaga-aagaaaaGCATCAGTCCTGG--ATAGAGTTTA-GGTTGTATCAACTTGTCTGTAAACCTTAGGAAGCTG-GAATAAGAAGGGAGCGGTCTCGGCGGGTGCTCAGACTGGGTGGGT-GCAGGAGAAACTCTTG------------CTCCAGAGCAGGACCCCCTAAGGG--- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1392135 155 - 111193037 --------gaga-aagaaaaGCATCAGTCCTGG--ATAGAGTTTA-GGTTGTATCAACTTGTCTGTAAACCTTAGGAAGCTG-GAATAAGAAGGGAACGATCTCGGCGGGTGCTCAGACTGGGTGGGT-GCAGGAGAGACTCTTG------------CTCCAGAGCAGGACCCCCTAAGGG--- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1420607 154 + 3644372 --------gaga-aagaaaaGCATCAGTCCTGG--ATAGAGTTTA-GGTTGTATCAACTTGTCTGTAAACCTTAGGAAGGTG-GAATAAGAAGGGAACGATCTCGGCGGGTGCTCAGACTGGGTGGGT-GCAGGAGAGACTCTTG------------CTCCAGAGCAGGATCCCCT-AGGG--- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1374113 154 - 10304083 --------gaga-aagaaaaGCATCAGTCCTGG--ATAGCGTTTA-GGTTGTATCAACTTGTCTGTAAACCTTACGAAGGTG-GAATAAGAAGGGAACGATCTCGGCCGGTGCTCAGACTGGGTGGGT-GCAGGAGAGACTCTTG------------CTCCAGAGCAGGATCCCCT-AGGG--- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1449862 154 - 107702431 --------gaga-aagaaaaGCATCAGTCCTGG--ATAGAGTTTA-GGTTGTATCAGCTTGTCTGTAAACCTTAGGAAGGTG-GAATAAGAAGGGAACGATCTCGGCCAGTGCTCAGACTGGGTGGGT-GCAGGAGAGACTCTTG------------CTCCAGAGCAGGATCCCCT-AGGG--- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 927994 154 - 2200435 --------gaga-aagaaaaGCATCAGTCCTGG--ATAGAGTTTA-GGTTGTATCAACTTGTCTGTAAACCTTAGGAAGGTG-GAATAAGAAGGGAACGATCTCGGCCGGTGCTCAGACTGGGTGGGT-GCAGGAGAGACTCTTG------------CTCCAGAGCAGGATCCCCT-AGGG--- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1369042 149 - 108792865 ------gagagagaagaaaaaCATCAGTTCTGG--AGAGAGTATATAGGTTTATCAACTTGTCTGTAAATCGTACGAAGATGTGTATAACGAGCGAAAGGTCTCGGCAGGTGCTCAGACTG-----------GGAGAGACTCTTG------------TTCCAGAGCAAGATCTCCC-AGGG--- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1215190 149 - 7082604 ------gagagagaAGAAAAACGTCAGACCTGG--AGAGAGTATATAGGTTTATCAACTTGTCTGTAAATGGTAGAAAGATGTGAATAAGCAGGTCAAGATCTCTGCAGGTGCTCAGACTG-----------GGAGAGACTCTTG------------TTCCAGAGCAAGATCTCCC-AGGG--- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1303081 149 + 1864846 ------gagagagaagaaaaaCCTCAGTCCTGG--AGAGAGTATATGGGTTTGCCAACTTGTCTGTAAATTGTAGGAAGATGTGAATAAGGAGGGGAAGATCTCGGCAGGTTCTCAGACTG-----------GGAGAGACTCTTG------------TTCCAGGGCAAGATCTCCC-AGGG--- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 95885 148 + 287728 ------gagagagaagaacaaCATCAGTCCTGG--AGAGAGTCTGTAGCTTTATCAACTTGTCTGTAAATCAT-GGAAGATGTGAATCAGGAGGGAAAGATCTCGGCAGGTGCTCAGACTC-----------GGAGAGACTCTTG------------TTCCAGAGCAAGATCCCCC-AGGG--- i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1687967 169 + 4416731 --------AGGA-AAGAAAAA---CAGTCTTGGGTATATATTTTC-AGTTTCATAAATTAGGATGTAAATTATGGGTATGTTAGAGTATCAAAAGAGAGGCCATATCAAGT-CCATGTCTTTATGTATAGTATGAAAGATATCTGGTATGGTAAGAATTCCAGCATATGATTCCAG-GTGGTAG i dasNov3.JH576208 C 0 C 0 e mm10.chr12 89998366 963 - 120129022 I e otoGar3.GL873658 931936 929 + 5252280 I e colAng1.NW_012118821v1 1367821 1231 - 13651311 I e panTro5.chr2A 110126965 80344 - 111504155 T a score=978021.000000 s hg38.chr2_KI270774v1_alt 101533 127 + 223625 TCAAAGCACAAAGAGAAATAAACTTCAGCACCTG-AAA-ATTCTGTAAT--AAGAGTCTTTGAAAATGGAAAAAAAA------------------TCTATGCTTGACCATTGT-TGTCTAAGAGAAGTTTGCTATCAATCCCTCCTCTAA s panPan2.chr2A 1339479 129 + 114371477 TCAAAGCACAAAGAGAAATAAACTTCAGCACCTG-AAA-ATTCTGTAAT--AAGAGTCTTTGAAAATGGAAAAAAAA----------------AATCTATGCTTGACCATTGT-TGTCTAAGAGAAGTTTGCTATCAATCCCTCCTCTAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1364562 128 + 1464242 TCAAAGCACAAAGAGAAATAAACTTCAGCACCTG-AAA-ATTCTGTAAT--AAGAGTCTTCGAAAATGGAAAAAAAA-----------------ATCTATGCTTGACCATTGT-TGTCTAAGAGAAGTTTGCTATCAATCCCTCCTCTAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1088834 125 + 81552678 TCAAAACACAAAGAGAAATACACTTCAGCACCTG-AAA-ATTCTCTAAT--AAGAGTCTTTGAAAATGTAAACAA--------------------TCTATGCATGACCATTGT-TGTCTAAGAGAAGTTTGTTATCAATCCCTCCTCTAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1419913 145 + 108979918 TCAAAGCACAAAGAGAAATAAACTTCAGCACCTG-AAA-ATTCTGTAAT--AAGAGTCTTTGAAATTGGAAAAAGATTTCATTTTCCCTCCAAAGTCTGTGCATGACCATTGT-TGTCTGAGAGAAGTTTGCTACCAGTCCCTCCTCTAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1392290 145 - 111193037 TCAAAGCACAAAGAGAAATAAACTTCAGCACCTG-AAA-ATTCTGTAAT--AAGAGTCTTTGAAATTGGAAAAAGATTTCATTTTCCCTCCAAAGTCTGTGCATGACCATTGT-TGTCTAAGAGAAGTTTGCTACCAGTCCCTCCTCTAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1420761 145 + 3644372 TCAAAGCACAAAGAGAAATAAACTTCAGCACCTG-AAA-ATTCTGTAAT--AAGAGTCTTTGAAATTGGAAAAAGATTTCATTTTCCCTCCAAAGTCTGTGCATGACCATTGT-TGTCTGAGAGAAGTTTGCTACCAGCCCCTCCTCTAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1374267 145 - 10304083 TCAAAGCACAAAGAGAAATAAACTTCAGCACCTG-AAA-ATTCTGTAAT--AAGAGTCTTTGAAATTGGAAAAAGATTTCATTTTCCCTCCCAAGTCTGTGCATGACCATTGT-TGTCTAAGAGAAGTTTGCTACCAGTCCCTCCTCTAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1450016 145 - 107702431 TCAAAGCACAAAGAGAAATAAACTTCAGCACCTG-AAA-ATTCTGTAAT--AAAAGTCTTTGAAATTGGAAAAATATTTCATTTTCCCTCCAAAGTCTGTGCATGACCATTGT-TGTCTAAGAGAAGTTTGCTACCAGTCCCTCCTCTAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 928148 145 - 2200435 TCAAAGCACAAAGAGAAATAAACTTCAGCACCTG-AAA-ATTCTGTAAT--AAGAGTCTTTGAAATTGGAAAAAGATTTCATTTTCCCTCCCAAGTCTGTGCATGACCATTGT-TGTCTAAGAGAAGTTTGCTACCAGTCCCTCCTCTAA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1369191 141 - 108792865 TCAAACCACAAAGAGAAATGATCTTCAGCACCTG-AAA-ACTCTGTAAC--AAGAGGCTTTGAAAATCA-AAAAGATTTCATTTCCCCCC--AAATCTGTGCATGCCCGTTGC-CATCT-AGAGAAGTTTGCTCCCCAGTCCCTTCCTCT i calJac3.chr14 C 0 M 246 s saiBol1.JH378218 1215339 143 - 7082604 TCAAACCAC--AGAGAAATGAACTTCAGCACCTGAAAA-ATTCTGTAAC--AAGAGGCTTTGAAAATCAGAAAAGATTTCATTTCCCCCC-AAAATCCGTGCATGCCCACTGT-CACCTAAGAGAAGTTTGCTCCCAATCCCTTCTCTAT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1303230 145 + 1864846 CCAAACCACAAAGAGAAATGAACTTCAGCACCTGAAAA-ATTCTGTAAC--AAGAGCCTTTGAAAATCGAAAAAGATTTCATTTCCCCCC-AAAATCTATGCATGCCCCCTGT-CATCCAAGAGAAGTTTGCTCTCAATCCCTTCTCTAA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 96033 144 + 287728 TCAAACCACAAGGAGAAATGAACTTCAGCACCTG-CAA-ATTCTGTAAC--AAGAGGCTTTGAAATTCGAAAAAGATTTCATTTCCCCCC-AAAATCTACTCATACCCATTGT-CATCTAAGAGAAGTTTGCTCTCAACCCCCGCTCTAA i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 89999329 144 - 120129022 TCAAAGCACAGAGGAAAAGAAACCTCGGCACCTG-GAA-ATTCAGTAAT--AAACTACT--GAAAATGAAAAAAAGGTTTCATTTTCTCCTAAAGTATACCCATGACCATTATAAATCTAGGAAAACTTTGCTCGTAGCCTCTCTTGACA i mm10.chr12 I 963 I 1 s dasNov3.JH576208 1688136 142 + 4416731 TCAAATCATGGGAAAAAATAAACTGCAGCACCAG-AAATATTCTATAATTAAAAATAATATGAAAATGGAAAACGATTTCAATTTTGCTCAGAA-----TGCATGACCATTGT-GGTTTGAAAAAAATCAATT-TAAACCCCTTTTCAAA i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 931936 929 + 5252280 I e colAng1.NW_012118821v1 1367821 1231 - 13651311 I e panTro5.chr2A 110126965 80344 - 111504155 T a score=187121.000000 s hg38.chr2_KI270774v1_alt 101660 36 + 223625 CGCCCTGAACAGAATGTTCTTCACCA-GAACCCTGTG s panPan2.chr2A 1339608 36 + 114371477 AGCCCTGAACAGAATGTTCTTCACCA-GAACCCTGTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1364690 36 + 1464242 AGCCCTGAACAGAATGCTCTTCACCA-GAACCCTGTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1088959 34 + 81552678 AGCCCTGAACAG--TGTTCTTCACCG-CAGCCCTGTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1420058 36 + 108979918 AACCCTGAACAGAGTGTTCATCACCG-GAGCCCTGTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1392435 36 - 111193037 AACCCTGAACAGCGTGTTCATCACCG-GAGCCCTGTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1420906 36 + 3644372 AACCCTGAACAGCGTGTTCATCACCG-GAGCCCTGTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1374412 36 - 10304083 AACCCTGAACAGAGTGTTCATCACCG-GAGCCCTGTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1450161 36 - 107702431 AACCCTGAACAGAGTGTTCATCACCG-GAGCCCTGTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 928293 36 - 2200435 AACCCTGAGCAGAGTGTTCATCACCG-GAGCCGTGTG i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1215482 36 - 7082604 CCCGCTGAATTGAATGCTCATCACCG-GAGCCCTGGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1303375 35 + 1864846 AGTGCTGAATTGAGTGCTCA-CACCG-GAGCCCTGGG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 96177 36 + 287728 AGCGCTGAATTGAGTGCTCATCACCG-GAGCCCTGTG i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 89999474 33 - 120129022 --CCCTCTGTAGCACATGCTCCA-TG-AAGCACTGCG i mm10.chr12 I 1 C 0 s dasNov3.JH576208 1688278 37 + 4416731 AACAGTGACTTGAGGGTATATTATGATAAGCCATATG i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 931936 929 + 5252280 I e calJac3.chr14 1369332 246 - 108792865 M e colAng1.NW_012118821v1 1367821 1231 - 13651311 I e panTro5.chr2A 110126965 80344 - 111504155 T a score=2962282.000000 s hg38.chr2_KI270774v1_alt 101696 379 + 223625 TATTCATCACCACACAGGCTGAG-AGGCA-TTCCAGCATTTGTGCAACATCAAGATTTATGTGCAATTATCTTTATGGCAAATGTTCCA-CAA---GTTATAGCTGTTAAAAGAAAATAAGATGCAAATGAACAAGAAGAAGCAGAGGCGCTGCCTGCAGCCT-----GGGAAAATTTGGGAAGCTAGCCTAATGAGTGAATTTGTTTTAAAAGGAAAGTTGGCAAACCTTATTCCAGTTCATTAAATTTCAACAAACAGCAAGGATTAAAGTAAGAATC--AACACACAACTCTAAACAGGAATCAAGCGCTTAGAA----TTAGGAGCAAAGCTCTGGC-CCTGGGGGC---T-TATGGTTTTGGAGAAGAAAGATTTTGGCTTTCATATAT--ATA-----------------------------TTTA s panPan2.chr2A 1339644 370 + 114371477 TATTCATCACCACACAGGCTGAG-AGGCA-TTCCAGCATTTGTGCAAAATCAAGATTTATGTGCAATTATCTTTATGGCAAATGTTCCA-CAA---GTTATAGCTGTTAAAA-----TAAGATGCAAATGAACAACAGGAAGCAGAGGCGCTGCCTGCAGCCT-----GGGAAAATTTGGGAAGCTAGCCTAATGAGTGAATTTGTTTTAAAAGGAAAGTTGGCAAACCTTATTCCAGTTCATTAAATTTCAACA----GCAAGGATTAAAGTAAGAATC--AACACACAACTCTAAACAGGAATCAAGCGCTTAGAA----TTAGGAGCAAAGCTCTGGC-CCTGGGGGC---T-TATGGTTTTGGAGAAGAAAGATTTTGGCTTTCATATAT--ATA-----------------------------TTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1364726 377 + 1464242 TATTCATCACCACACAGGCTGAG-AGGCA-TTCCAGCATTTGTGCAAAATCAAGATTTATGTGCAATTATCTTTATGGCAAATG-TCCA-CAA---GTTATAGCTGTTAAAAGAAAATAAGATGCAAATGAACAACAGGAAGCAGA-GCGTTGCCTGCAGCCT-----GGGAAAATTTGGGAAGCTAGTCTAATGAGTGAATTTGTTTTAAAAGGAAAGTTGGCAAACCTTATTCCAGTTCATTAAATTTCAACAAACAGCAAGGATTAAAGTAAGAATC--AACACACAACTCTAAACAGGAATCAAGCGCTTAGAA----TTAGGAGCAAAGCTCTGGC-CCTGGGGGC---T-TATGGTTTTGGAGAAGAAAGATTTTGGCTTTCATATAT--ATA-----------------------------TTTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1088993 380 + 81552678 TATTCATCACCACACAGGCTGAG-AGGCA-TTCAAGCATTTGCGCAAAATCAAGATTTATGTGCAATTATCTTTATGGCAAATGTTCCACCAA---GTTATAGCTGTTAAAAGAAAATAAGATGCAAATGAACAACAGGAAGCAGAGGCGCTGCCTGCAGCCT-----GGGAAAATTTGGGAAGCTAGCCTAATGAGTGAATTTGTTTTAAAAGGAAAGTTGGCAAACCTTATTCCAGTTCATTAAATTTCAACAAACAGCAATGATTAAAGTGAGAATC--AACCCACAACTCTAAACAGGAATCAAGCGCTTAGAA----TTAGGAGCAAAGCTCTGGC-CTTGGGGGC---T-TATGGTTTTGGAGAAGAAAGATTTTGGCTTTCATTTAT--ATA-----------------------------TTTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1420094 405 + 108979918 TATTCATCCCCTCGCGGGCTGAG-CGGCA-TTCCAGCATTTGTGCAAAATCAAGATTTATGTGCAATTAGCTTTATGGCAAATGTTCCA-CAA---GTTATAGCTGTTAAAAGAAAACAAGATGCAAATGAACAACGGGAAGCAGCGGCGCTGCCTGCAGACT-----GGGAAAATTTGGGAAGCTAGCCTAATGAGTGGATTTGTTTTAAAAGGAAAGTTGGCAAACCTTATTCCAGTTCATTAAATTTCAACAGACAGCAATGATTAAAGTGAGAATC--AACGCACGACTCTAAACAGGAATCCAGCGCTTAGAG----TTAGGGGCAAAGCTCTGGC-CCTGGGGGC---T-TAGGGTTTTGGAGAAGA---ATTTTGGCTTTCatataa--atatagatatgtatttatatatatataGGTTTTTTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1392471 405 - 111193037 TATTCATCCCCTCGCAGGCTGAG-CGGCA-TTCCAGCATTTGTGCAAAATCAAGATTTATGTGCAATTAGCTTTATGGCAAATGTTCCA-CAA---GTTATAGCTGTTAAAAGAAAACAAGATGCAAATGAACAACGGGAAGCAGAGGCGCTGCCTGCAGACT-----GGGAAAATTTGGGAAGCTAGCCTAATGAGTGGATTTGTTTTAAAAGGAAAGTTGGCAAACCTTATTCCAGTTCATTAAATTTCAACAGACAGCAATGATTAAAGTGAGAATC--AACACACGACTCTAAACAGGAATCCAGCGCTTAGAG----TTAGGGGCAAAGCTCTGGC-CCTGGGGGC---T-TAGGGTTTTGGAGAAGA---ATTTTGGCTTTCatataa--atatagatatgtatttatatatatataGGTTTTTTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1420942 405 + 3644372 TATTCATCCCCTCGCAGGCTGAG-CGGCA-TTCCAGCATTTGTGCAAAATCAAGATTTATGTGCAATTAGCTTTATGGCAAATGTTCCA-CAA---GTTATAGCTGTTAAAAGAAAACAAGATGCAAATGAACAACGGGAAGCAGAGGCGCTGCCTGCAGACT-----GGGAAAATTTGGGAAGCTAGCCTAATGAGTGGATTTGTTTTAAAAGGAAAGTTGGCAAACCTTATTCCAGTTCATTAAATTTCAACAGACAGCAATGATTAAAGTGAGAATC--AACACACGACTCTAAACAGGAATCCAGCGCTTAGAG----TTAGGGGCAAAGCTCTGGC-CCTGGGGGC---T-TAGGGTTTTGGAGAAGA---ATTTTGGCTTTCatataa--atatagatatgtatttatatatatataGGTTTTTTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1374448 405 - 10304083 TATTCATCCCCTCGCAGGCTGAG-TGGCA-TTCCAGCATTTGTGCAAAATCAAGATTTATGTGCAATTATCTTTATGGCAAATGTTCCA-CAA---GTTATAGCTGTTAAAAGAAAACAAGATGCAAATGAACAACGGGAAGCAGAGGCGCTGCCTGCAGACT-----GGGAAAATTTGGGAAGCTAGCCTAATGAGTGAATTTGTTTTAAAAGGAAAGTTGGCAAACCTTATTCCAGTTCATTAAATTTCAACAGACAGCAATGATTAAAGTGAGAATC--AACATACGACTTTAAACAGGAATCCAGTGCTTAGAG----TTAGGGGCGAAGCTCTGGC-CCTGGGGGC---T-TAGGGTTTTGGAGAAGA---ATTTTGGCTTTCatataa--atatatatatgtatttatatatatataGGTTTTTTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1450197 407 - 107702431 TATTCATCCCCTCGCAGGCTGAG-CGGCA-TTCCAGCATTTGTGAAAAATCAAGATTTATGTGCGATTATCTTTATGGCAAATGTTCCA-CAA---GTTATAGCTGTTAAAAGAAAACAAGATGCAAATGAACAACAGGAAGCAGAGGCACTGCCTGCAGATT-----GGGAAAATTTGGGAAGCTAGCCTGATGAGTGAATTTGTTTTCAAAGGAAAGTTGGCAAACCTTATTCCAGTTCATTAAATTTCAACAGACAGCAATGATTAAAGTGAGAATC--AACGCACGACTCTAAACAGGAATCCAGCGCTTAGAA----TTAGGGGCGAAGCTCTGGC-CCTGGGGGC---T-TAGGGTTTTGGAGAAGA---ATTTTGGCTTTCatataaatatatatatatgtagttatatatatataGGTTTTTTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 928329 405 - 2200435 TATTCATCCCCTCGCAGGCTGAG-CGGCA-TTCCAGCATTTGTGCAAAATCAAGATTTATGTGCAATTATCTTTATGGCAAATGTTCCA-CAA---GTTATAGCTGTTAAAAGAAAACAAGATGCAAATGAACAACGGGAAGCAGAGGCGCTGCCTGCAGACT-----GGGAAAATTTGGGAAGCTAGCCTAATGAGTGAATTTTTTTTAAAAGGAAAGTTGGCAAACCTTATTCCAGTTCATTAAATTTCAACAGACAGCAATGATTAAAGTGAGAATC--AACACACGACTCTAAACAGGAATCCAGCACTTAGAA----TTAGGGGCAAAGCTCTGGC-CCTGGGGGC---T-TAGGGTTTTGGAGAAGA---ATTTTGGCTTTCatataa--atatatatatgtatttatatatatataGGTTTTTTT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1369585 400 - 108792865 TGTTTATCACTACACAGACTGAG-CTGCA-GTCCAGCATTTGTGTAAAATCAAGATTTATGTGTGATTATCTTTGTGGCAAATGTTCCA-CAA---GTTACAGTGGTTAAAAGAAAATAGGATGCAAATGAGCAACAGGAAGCGGAGGCAGTGCCCGCCAACTTCAGCTGGAAGATGTGGGAAGCTTGCCTAGCAAGTGAGTTTGTTTAAAAAGGAAAGTTGGCAAACCTTCCCCCAGTTTA-TAAATTTCAGCCAAGAGCAATGATTAAAGTGAGGATC--AACACACAACTCTGAATGGAAATCAAGTGCTTAGAATCATTCAGGGGCAAAGCTCTGGT-CCTGGGGGC---T-TATGGTTTTGGTGAAGAAAGATTTTGGCTTTCatatat--atatatataatttttt----------------ttta i calJac3.chr14 M 246 C 0 s saiBol1.JH378218 1215518 375 - 7082604 TGTCTGTCACTACACAGACTGAG-CTGCA-CCCT--------TGTAAAATCACGATTTATGTGTGATCATCGTTATGGCAAATGTTCCA-CAA---GTTACAGTGGTTAATAGAAAATAAGATGCAAATGAGCAACGGGAAGCGGAGGCGGTGCCCG-CGACT-----GGGAAGACGTGAGAAGCTTGCCGAGCGAGCGAGTTTGTTTAAAAAGGAAACTTGGCAAACCTTCCCCCAGTTTA-TAAATTTCGGGCAACAGCAATGATTAAAGTGAGGAAC--AACACTCAACTCTGAATGGAAATCAAGCGCTTAGAATCATTCAGTGGCAAAGCTCTGGT-CCTGGGGGC---T-TATGGTTTTGGTGAAGAAAGATTTTGGCTTTCATATAT--ATATA---------------------------TTTT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1303410 395 + 1864846 TGTTTATCGCTACACAGACTGAG-CTGCA-GTCCAGCATTCGTGTAAAATCAAGATTTATGTGTGATTATCTTTATGGCAAATGTTCCA-CAA---GTGACAGTGGTTAAAAGAAAATAAGATGCAAATGAGCAACGGGAAGCGGAGGCAGTGCCCGCGGACT-----GGGAAGACAAGGGGAGCTTGCCGAGCGAGTGAGTTTGTTTAAAAAGGAAAGTTGGCAAACCTTCCCCCAGTTTA-TAAATTTTGGCCAACAGCAATGATTAAAGTGAGGATC--AACACTCAACTCTGAACGGAAATCAAGTGCTTAGAATCAGTCAGGGGCAAAGCTCTGGT-CCTGGGGCC---T-TATGGTTTTGGTGAAGAAACATTTTGGCTTTCATATAT--ATATACATATTTTTTT----------------TTTT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 96213 393 + 287728 TGTTTATCACTGCACAGACCGAG-CTGCA-GTCCAGCATTTGTGTAAAATCAAGATTTATGTGCAATTATCTTTATGGCAAATAGTCCA-CAA---GTTACAGTGGTTAAAAGAAAATAAGACGCAAATGAGCAACGGGAAGCCGAGGCAGTGCCCGCGGACT-----GGGAAGATGTGGGGAGCTTGCCTAGCGAGTGAGTTTGTTTAAAAAGGAAAGTTGGAAAACCTTCCCCCAGTTTA-TAAATTTCGGCCAACAGCAATGATTAAAGTGAGGATC--AACACACAACTCTGAACGGAAATCAAGCGCTTAGAATCATTCAGGGGCAAAGCTCTGGT-CCTGGGGCC---T-TATGGTTTTGGTGAAGAAAGATTTTGGCTTTCATATAT--ATATATATAATTTT------------------TTTT i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 89999507 375 - 120129022 TATTCCTCTC--AACAGACTGAGATGGGC-TTCCAGTGTTTGTGCAAAATTAAGATCCATGTGAAATTATCTTTATGGCGAAC--TCAG-CGGCTCGTTGTAGCTGTGAAAAGAAAATAAGATGCAAATGAACAGCGTG-AGCAGGAAAGCTGCCTGCAAATC-----CTGAGA--TTGGGAAGCCAGCCTAGTGGGGGAGTCT-----AAAAGGAAAGCTGGCCAGCTCTGTTCCAGTTCACCAGATTTCTGAAAACAGAGATCATCAAAACACG-ATC--CACACAGAACGCTGAGTGAATCCCAGGTGACCAGAGTCAGCCAAGGGCAGCACGTGGGAGCCTGGGGCC---TCTGTGGCTTTGGACAGGA-AGACATTGGCTTTCTTTCAC--TTC-----------------------------TTTT i mm10.chr12 C 0 I 9 s dasNov3.JH576208 1688315 416 + 4416731 TATTCATCAC--CACAGATTGTG-GCGCATTTTCAGTGATTGTGCAAAGTCAAGATTTATGTGCAATTATCTTTATGGAAAATGGCCCAACAA---GTTATAGCTGTTAAAAGAAAATAAGATGCAAATGAACAAGTAGAAGCAGAGGCATTGCTTGTAGATT-----GGGAAAATTTGGGAAGCCAGCCTAATGAGTGAATTTGCTTAAAAATGAAAGTTGGCAAACTTTATTCCTGTTCATTGGATTTCTGAAAACAGGGATTATTTAAGTAAGAATCAAAATGCAGAGCTCTAAGTAAAAACCAAGTATTCAGAGTTAGTGAAGGATAAGCCTTGGGA-GCCAGGCACATTT-TATGATTTTGGAGAAGGAAGATTTCAGCTTTCTTGAAT--Ttatacatacacacatacacacacatacatatata- i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 931936 929 + 5252280 I e colAng1.NW_012118821v1 1367821 1231 - 13651311 I e panTro5.chr2A 110126965 80344 - 111504155 T a score=2701467.000000 s hg38.chr2_KI270774v1_alt 102075 298 + 223625 ----------------------------------ACATAAA-CAGCCTTTGGAACAAGGCAACTTCCTTCTTCTTTCTGAAATGTGGTATGTTCTTGCCTAATGTGTCCCTGAATTCCACCTCTTTTATGAACAATATGAATATGCATAAAGGAGAA---TTTGGGGGAACCGTGCCATGCG------CCCCTCAGAGCAGGAGCAATCTTGAGAAGGCGCAGGCA-----------GAGAGCAGCGGGCGGCTTCTCCAGAGCAA---------------GTAATT------AAGTCCCGTGACTCCCTAGAACTCAGTGTTCAGTTCTGAAAAA-----AAACTTCGGGTTCAAACTCCCTAAGTCTATGGTCCTTG s panPan2.chr2A 1340014 298 + 114371477 ----------------------------------ACATAAA-CCGCCTTTGGAACAAGGCAACTTCCTTCTTCTTTCTGAAATGTGGTATGTTCTTGCCTAATGTGTCCCTGAATCCCACCTCTTTTATGAACAATATGAATATGCATAAAGGAGAA---TTTGGGGGAACCGTGCCATGCG------CCCCTCAGAGCAGGAGCAATCTTGAGAAGGCGCAGGCA-----------GAGAGCAGCGGGCGGCTTCTCCAGAGCAA---------------GTAATT------AAGTCCCGTGACTCCCTAGAACTCAGTGTTCAGTTCTGAAAAA-----AAACTTGGGGTTCAAACTCCCTAAGTCTATGGTCCTTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1365103 296 + 1464242 ----------------------------------ACATAAA-CAGCCTTTGGAACAAGGCAACTTCCTTCTTCTTTCTGAAATGTGGTATGTTCTTGCCTAATGTGT-CCTGAATCCCACCTCTTTTATGAACAATATGAATATGCAC-AAGGAGAA---TTTGGGGGAACCGTGCCATGCG------CCCCTCAGAGCAGGAGCAATCTTGAGAAGGCGCAGGCA-----------GAGAGCAGCGGGCGGCTTCTCCAGAGCAA---------------GTAATT------AAGTCCTGTGACTCCCTAGAACTCAGTGTTCAGTTCTGAAAAA-----AAACTTCGGGTTCAAACTCCCTCAGTCTATGGTCCTTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1089373 301 + 81552678 ----------------------------------ACATAAA-CAGCCTTTGGAACAAGGCAGCTTCCTTCTTCTTTCTGAAATATGGTATGTTCTTGCCTAATGTGTCCCTGAATCCCACCTCTTTTATGAACAATATGAATATGCATAAAGGAGAA---TTTGGGGGAACCGTGCCATGCG------CCTCTCAGAGCAGGAGCAATCTTGAGAAGGCGCAGCCA-----------GAGAGCAGCGGGCGGCTTCTCCAGAGAAA---------------GTAATT------AAGTCCCGTGACTCCCTAGAATTCAGTGTTCAGTTCTGAAAAA--AATAAAGTTCAGGTTCAAACTCCCTAAGTCTATGGTCCTTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1420499 301 + 108979918 ----------------------------------ACATAAA-CAGCCTTTGGAACAAGGCAACTTCCTTCTTCTTTCTGAAATATAGTATGTTCTTGCCGAATGTGTCCCTGAATCCCACCTCTTTTATGAACAATATGAATATGCGTAAAGGAGAA---TTTGGGGGAACCGTGCCATGCA------CCTCTCAGAGCAGGAGCAATCTCGAGAAGGCGCAGGCA-----------GAGGGCAGTGGGCAGCTTCTCCAGAGCAA---------------GTAATT------AAGTCCCGTGACTCCCTAGAATTCAGTGTTCAGTTCTGAAAAA--AATAAAGTTCAGGTTCAGACTCCCTAAGTCTATGGTCCTTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1392876 301 - 111193037 ----------------------------------ACATAAA-CAGCCTTTGGAACAAGGCAACTTCCTTCTTCTTTCTGAAATATAGTATGTTCTTGCCGAATGTGTCCCTGAATCCCACCTCTTTTATGAACAATATGAATATGCGTAAAGGAGAA---TTTGGGGAAACCGTGCCATGCA------CCTCTCAGAGCAGGAGCAATCTCGAGAAGGCGCAGGCA-----------GAGAGCAGTGGGCAGCTTCTCCAGAGCAA---------------GTAATT------AAGTCCCGTGACTCCCTAGAATTCAGTGTTCAGTTCTGAAAAA--AATAAAGTTCAGGTTCAGACTCCCTAAGTCTATGGTCCTTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1421347 301 + 3644372 ----------------------------------ACATAAA-CAGCCTTTGGAACAAGGCAACTTCCTTCTTCTTTCTGAAATATAGTATGTTCTTGCCGAATGTGTCCCTGAATCCCACCTCTTTTATGAACAATATGAATATGCGTAAAGGAGAA---TTTGGGGGAACCGTGCCATGCA------CCTCTCAGAGCAGGAGCAATCTCGAGAAGGCGCAGGCA-----------GAGAGCAGTGGGCAGCTTCTCCAGAGCAA---------------ATAATT------AAGTCCCGTGACTCCCTAGAATTCAGTGTTCAGTTCTGAAAAA--AATAAAGTTCAGGTTCAGACTCCCTAAGTCTATGGTCCTTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1374853 301 - 10304083 ----------------------------------ACATAAA-CAGCCTCTGGAACAAGGCAACTTCCTTCTTCTTTCTGAAGTATAGTATGTTCTTGCCGAATGTGTCCCTGAATCCCACCTCTTTTATGAACAATATGAATATGCATAAAGGAGAA---TTTGGGGGAACCGTGCCATGCA------CCTCTCAGAGCAGGAGCAGTCTTGAGAAGGCGCAGGTG-----------GAGAGCAGTGGGCAGCTTCTCCAGAGCAA---------------GTAATT------AAGTCCCGTGACTCCCTAGAATTCAGTGTTCAGTTCTGAAAAA--AATAAAGTTCAGGTTCAGACTCCCTAAGTCTATAGTCCTTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1450604 301 - 107702431 ----------------------------------ACATAAA-CAGCCTTTGGAACAAGGCAACTTCCTTCTTCTTTCTGAAATATAGTATGTTCTTGCCGAATGTGTCCCTGAATCCCACCTCTTTTATGAACAATATGAATATGCATAAAGGAGAA---TTTGGGGGAACCGTGCCATGCA------CCTCTCAGAGCAGGAGCAATCTTGAGAAGGCGCAGGTG-----------GAGAGCAGTGGGCAGCTTCTCCAGAGCAA---------------GTAATT------AAGTCCCGTGACTCCCTAGAATTCAGTGTTCAGTTCTGAAAAA--AATAAAGTTCAGGTTCAGACTCCCTAAGTCTATGGTCCTTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 928734 301 - 2200435 ----------------------------------ACATAAA-CAGCCTTTGGAACAAGGCAACTTCCTTCTTCTTTCTGAAATATAGTATGTTCTTGCCGAATGTGTCCCTGAATCCCACCTCTTTTATGAACAATATGAATACGCATAAAGGAGAA---TTTGGGGGAACCGTGCCATGCA------CCTCTCAGAGCAGGAGCAGTCTTGAGAAGGCGCAGGTG-----------GAGAGCAGTGGGCAGCTTCTCCAGAGCAA---------------GTAATT------AAGTCCCGTGACTCCCTAGAATTCAGTGTTCAGTTCTGAAAAA--AATAAAGTTCAGGTTCAGACTCCCTAAGTCTATAGTCCTTG i manLeu1.NW_012103754v1 C 0 M 3735 s colAng1.NW_012118821v1 1369052 301 - 13651311 ----------------------------------ACATAAA-CAGCCTTTGGAACAAAGCAACTTCCTTCTTCTTTCTGAAGTATAGTATGTTCTTGCCGAATGTGTCTCTGAATCCCACCTCTTTTATGAACAATATGAATATGCATAAAGGAGAA---TTTGGGGGAACCGTGCCATGCG------CCTCTCAGAGCAGGAGCAATCTTGAGAAGGCGCAGGCA-----------GAGAGCAGTGGGCAGCTTCTCCAGAGCAA---------------GTAATT------AAGTCCCGTGACTCTCTAGAATTCAGTGTTCAGTTCTGAAAAA--AATAAAGTTCAGGTTCAGACTCCCTAAGTCTATGGTCCTTG i colAng1.NW_012118821v1 I 1231 C 0 s calJac3.chr14 1369985 299 - 108792865 ----------------------------------aCATGAA-CAGTCTTTGGAACAAGACAACTTCCTCTTTCTTTCTGAAATACAGTGTGTTCTCGCATAATGCGTCCCTGAATCCCACCTGTTTAATAAACAATATGAATCTGCATAAAGGAGAA---TTT-GGGGACCCATGCCTTGTG------CCTCTCAGAGCAGGAGCCATCTTGAGAAGGCGCAGGCA-----------GAGAGCATC-GGCCACTTCTGCAGAGCAA---------------GTAACT------AAGTCCTGCACCTCCCTAGAATTCAGTGTTCAGTTCTGAAAAA--CATAAAGGTCAGGTTTAAACCCCGTAAATCTGTGGTCCTTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1215893 298 - 7082604 ----------------------------------ACATGAA-CAGTCTTTGGAACAAGGCAACTTCC---TTCTTTCTGAAATACAGTGTGTTCTTGCATAATGCATCCCTGAATCCCACTTGTTTAATCAACAATGTGAATGTACATAAAGGAGAA---TTTGGGGGACCCACGCCTTGTG------CCTCCCAGAGCAGGAGCAACCTTGAGAAGGTGCAGGCT-----------GAGAGCATTGGGCCACTTCTGCAGAGCAA---------------GTAATT------AAGTCCTGTGACTCCCTAGAATTCAGTGTTCAGTTCTGAAAAT--AATAAAGGTCAGGTTCAAACTCCTTAAGTCTATGGTCCTTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1303805 301 + 1864846 ----------------------------------ACATGAA-CAGTCTTTGGAACAAGGCAACTTCCTTCTTCTTTCTGAAATACAGTGTGTTCTTGCATAATGCATCCCTGAATCCCACCTGTTTAATAAACAATATGAATGTGCATAAAGGAGAA---TTTGGGGGACCCGTGCCTTGCG------CCTCTCAGAGCAGGAGCAATCTTGTGAAGGCGCAGGCA-----------GAGAGCATCGGGCCACTTCTGCAGAGCAA---------------GTAATT------AAGTCCTGTGACTCCCTAGAATTCAGTGTTCAGTTCTGAAAAA--CATAAGGGTCAGGTTCAAACTCCTTAAGTCTATGGTCCCTG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 96606 301 + 287728 ----------------------------------ACATGAA-CAGTCTTTGGAACAAGGTAACTTCCTTCTTTTTTCTGAAATACAGTGTGTTCTTGCATAATGCATCCCTGAATCCCACCTGTTTAATAAACAATATGAAAGTGCATAAAGGAGAA---TTGGGGGGACCCATGCCTTGCG------CCTCTCGGAGCAGGAGCAATCTTGAGAAGGCGCAGGCA-----------GAGAGCATCGGGCCACTTCTGCAGGGCGA---------------GTAATT------AAGTCCTGTGACTCCCTGGAATTCAGTGTTCAGTTCTGAAAAA--AATAAAGGTCAGGTTCAAACTCCTTAAGTCTATGGTCCTGG i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 89999891 267 - 120129022 ----------------------------------TTGTGAA-CA-TGTCTGGAAGTATGTAGCCTGTTTCTTTGTCCTGGCATACGGTATCTTCATGTATAATGGCTTCTTGCATTCCAGT--------------TATGAATATGCAAGAGGTGGGA---TTCTAGAGGCCAG-----TGTG------CCTCCCAGAGCAGATGGCACTTTCAGGACATACACATA-----------GAAAGC---------------CGGGACAG---------------GGAA-T------AAGTCATGTTACTCTCTAGAATTTGGATTTCTGTTCTAGACAAACAGAAGAGACCAAGTTGAAATTCTTAGGATCATTGACTCTAG i mm10.chr12 I 9 C 0 s dasNov3.JH576208 1688731 363 + 4416731 ACAGAGGTGGCTGTCTAAAGACAATCTAAAGTCTATATAAAGTCTCTTTTGAAATAAGGC----------TTATTTCTGAAAAATAGTATTTTCTTGCATGACGAATTCTTGAATTTCAGCTATTTTATATAAAAGATGAACATGCATGGACAAGAACCTTTCGTGGGGATGAGATAGGGCAATAAATCCTATcagagagacaactcattttagcaagtgcacatacccagagtctggagaccagagtgtta--gctccagatcaactattatataactgtgtgattttagacaagtcatgtaactttctagagtttagttttcagacccaaaaag--a--aaataataGGTTCAAATTCTATAAGTCTACGACCATAC i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 931936 929 + 5252280 I e panTro5.chr2A 110126965 80344 - 111504155 T a score=216237.000000 s hg38.chr2_KI270774v1_alt 102373 28 + 223625 CATCAGACGCCTCTTCCCTGGGATTGCT s panPan2.chr2A 1340312 28 + 114371477 CATCAGACGCCTCTTCCCTGGGACTGCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1365399 28 + 1464242 CATCAGACGCCTCTTCCCTGGGACTGCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1089674 28 + 81552678 CATCAGACACCTCTTCCCTGGGACTGCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1420800 28 + 108979918 CATCCGACGCCTCTTCCCTGGGACTGCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1393177 28 - 111193037 CATCCGACGCCTCTTCCCTGGGACTGCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1421648 28 + 3644372 CATCCGACGCCTCTTCCCTGGGACTGCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1375154 28 - 10304083 CATCCGACGCCTCTTCCCTGGGACTGCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1450905 28 - 107702431 CATCCGACGCCTCTTCCCTGGGACTGCT i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1369353 28 - 13651311 CATCCGACGCCTCTTCCCTGGGACTGCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1370284 28 - 108792865 CATTCGATTCCTCTTCCCTGGGACTGCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1216191 28 - 7082604 CATCCGACTCCTCTTCCCTGGGACTGCT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1304106 28 + 1864846 CATCCGATTCCTCTTCCCTGGGACTGCT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 96907 28 + 287728 CATCCGACTCCTCTTCCCTGGGACTGCT i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90000158 3 - 120129022 ----------------CCT--------- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1689094 28 + 4416731 AATTTGCTGTCACTCCTCTGGACTTCCT i dasNov3.JH576208 C 0 I 89 e otoGar3.GL873658 931936 929 + 5252280 I e manLeu1.NW_012103754v1 929035 3735 - 2200435 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=2175558.000000 s hg38.chr2_KI270774v1_alt 102401 370 + 223625 GGGAACTGAGGAAGGAAGGGC-GCTGCAGAGCTAACGATAGCAAGGGGCTCAGAGCTGgccaccccagctccctggtggcaggagagctaatgtgagctgatggaaactgagaagcagcagataaaggaaaagccatctgccctgcct----------------ctatt-gcctaaaa-------gtagaacataaatccgcaaaagtgaccatttccctctccaacagaaaggacagaaattcatcaccagggaccccagg-ccctca-acagcctggaaccagccccagaggcatttgtgtggcaaacct--ctgcagccc-------------cggcctcccttcctgtagttgccccagagaggcctcctcaaaacgtgtttcctgggaactcaaagtcctttgcttt s panPan2.chr2A 1340340 371 + 114371477 GGGAACCGAGGAAGGAAGGGC-GCTGCAGAGCTAACGATAGCAAGGGGCTCAGAGCTGgccaccccagctccctggtggcaggagagctaatgtgagctgatggaaactgagaagcagcagataaaggaaaagccatctgccctgcct----------------ctatttgcctaaaa-------gtagaacataaatccgcagaagtgaccatttccctctccaacagaaaggacagaaattcatcaccagggaccccagg-ccctca-acagcctggaaccagccccataggcatttgtgtggcaaacct--ctgcagccc-------------tggcctcccttcctgtagttgccccagagaggcctcctcataacgtgtttcctgggaactcaaagtcctttgcttt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1365427 370 + 1464242 -GGAACCGAGGAAGGAAGGGC-GCTGCAGAGCTAACGATAGCAAGGGGCTCAGAGCTGgccaccccagctccctggtggcaggagagctaatgtgagctgatggaaactgagaagcagcagataaaggaaaagccatctgccctgcct----------------ctatttgcctaaaa-------gtagaacataaatccgcaaaagtgaccatttccctctccaacagaaaggacagaaattcatcaccagggaccccagg-ccctca-acagcctggaaccagccccagaggcatttgtgtggcaaacct--ctgcagccc-------------tggcctcccttcctgtagttgccccagagaggcctcctcacaatgtgtttcctgggaactcaaagtcctttgcttt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1089702 371 + 81552678 GGGAACCAAGGAAGGAAGGGCAGCCGCTGAGCTAAGGATAGCAAGGGGCTCAGAGC-GGCCACCCCAGCTCCCTGGTGTCAGGAGAGCTAATGtgagctgatggaaactgagaagcagcagataatggaaaagccatctgccctcctt----------------ctatttgcctaaaa-------gtagtacataaatccacaaaagtgaccctttccctctccagcagaaaggacagaaattcgtcaccggggaccgcagg-ccctca-acagcccggcaccagccccagaggcatttgtgtgacaaacct--ctgcagccc-------------tggcctcccttcctgtagttgccccagagaggcctcctcacaaggtgtttcccgggagctcaaagtcctttgcttt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1420828 354 + 108979918 GGGAACCGAGGAAGGAGGGGCAGCTGCAGAGCTAATGATGGCAGGGGGGTCAGAGCCAGCTACCCCTGCTCCCTGGCGGCAGGAAAGCTAACGtgagctgatggaaactgagaagcagcagataaaggaaaagccatctgccctccct----------------ctgtttggctaaaa-------gtagaacataaat-------------cctttccctgtccagcagagaggacagaaa-tcaccatgggggacccgagg-cct-----cagcctgggaccagtcccagaggcatctgtgtggcaaacct--ctgcagccc-------------tggcctcccttcctgtagctgccccagagagacctcctcacagtatgtttcccgggagctcaaagccctttgcttt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1393205 354 - 111193037 GGGAACCGAGGAAGGAGGGGCAGCTGCAGAGCTAACGATGGCAGGGGGGTCAGAGCCAGCTACCCCTGCTCCCTGGCGGCAGGAAAGCTAACGtgagctgatggaaactgagaagcagcagataaaggaaaagccatctgccctccct----------------ctgtttggctaaaa-------gtagaacataaat-------------cctttccctgtccagcagagaggacagaaa-tcaccatgggggacccgagg-cct-----cagtctgggaccagtcccagaggcatctgtgtggcaaacct--ctgcagccc-------------tggcctcccttcctgtagctgccccagagagacctcctcacagtatgtttcccgggagctcaaagccctttgcttt i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1421676 354 + 3644372 GGGAACCGAGGAAGGAGAGGCAGCTGCAGAGCTAACGATGGCAGGGGGGTCAGAGCCAGCTACCCCTGCTCCCTGGCAGCAGGAAAGCTAACGtgagctgatggaaactgagaagcagcagataaaggaaaagccatctaccctccct----------------ctgtttggctaaaa-------gtagaacataaat-------------cctttccctgtccagcagagaggacagaaa-tcaccatgggggacccgagg-cct-----cagcctgggaccagtcccagaggcatctgtgtggcaaacct--ctgcagccc-------------tggcctcccttcctgtagctgccccagagagacctcctcacagtatgtttcccaggagctcaaagccctttgcttt i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1375182 353 - 10304083 GGGAACCGAGGAAGGAGGGGCAGCTGCAGAGCTAACGATGGCGGGGGGGTCAGAGCCAGCTACCCCTGCTCCCTGGTGGCAGGAAAGCTAACGtgagctgatggaaa-tgagaagcagcagataaaggaaaagccatctgccctccct----------------ctgtttgcctaaaa-------gtagaacataaat-------------cctttccctgtccagcagaaaggacagaaa-tcaccatgggggacccgagg-cct-----cagcctggaaccagccccagaggcatctgtgtggcaaacct--ctgcagccc-------------cagcgtcccttcctgtagctgccccagagaggcctcctcacagtgtgtttcccgggagctcaaagccctttgcttt i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1450933 366 - 107702431 GGGAACCGAGGAAGGAGGGGCAGCTGCAGAGCTAACGATGGCGGGGGGGTCAGAGCCAGCTACCCCTGCTCCCTGGCGGCAGGAAAGCTGACGtgagccgatggaaactgagaagcagcagataaaggaaaagccatctgccctccct----------------ctgtttggctaaaa-------gtagaacataaatccgc-aaagtgtccctttccctgtccagcagaaaggacagaaa-tcaccatgggggaccccagg-cct-----cagcctgggaccagtcccagaggcatctgtgtggcaaacct--ctgcagccc-------------tggcctcccttcctgtagctgccccagagaggcctcctcacaatgtgtttcccgggagctcaaagccctttgcttt i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1369381 368 - 13651311 GGGAACCAAGGAAGGAAGGGCAGCTGCAGAGCTAACGATGGCACGGGGGTCAGAGCCAGCTACCCCAGCTCCCTGGTGGTAGGAAAGCTAATGtgagctgatggaaactgagaagcagcagataaaggaaaagccatctgccctccct----------------ctgtttgcctaaaa-------gtagaacataaatccgcaaaagtgtccctttccctctccagcagaaaggacagaaattcatcatgggggaccccaggccct-----cagcctggaaccagccccagaggcttttgtgtggcaaacct--ctgcagccc-------------tggcctcccttcctgtagttgccccagagaggcctcctcacagtgtg-ttcccgggagctccaagtcctttgcttt i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1370312 349 - 108792865 TGGCAC-GAGGAAGGAAGGGCAGCTGCAGGGCTGACGATGGGAAGGGGCTCAAAGCCGACCA-CCCAGCTCCCTGGtggcgggagagctaatgtgagctgctggaaactg---aaaagcagacgcaggaaaagctgtctgcacccccgctc---------cccaccgtttgcctaaaa-------gtagaacatagatccgcaaaagtgtccccttccctctctagcagag-------------------------cccaga-ccctcc-acagcctggagccag-cccagaggcgtttgtgtggggagcctgactgcagccc-------------cagcctcccttcccgt-gctgccccagagcggcctcctcacagtgtgtttcccgggagctcaaagtcctttgcttt i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1216219 362 - 7082604 TGGCAC-GAGGAAGGAAGGGCAGCTGCAGGGCTGACGGTGGGAAGGGGCTCAAAGCCGGCCA-CCCAGCTCCCTGGGGGCGAGAGAGCTAACGtgagcttctggaaactgagaagaagcagatgcaggaaaagctgtctgcacccccccacacacacacacaccccgtttgcctaaaa-------gtagaacatagatccgcaaaagtgtccccttccctctccagcagag-------------------------cccagg-ccctca-acagcctggaaccgg-cccagaggcatttgtgtggggagcctgcctgcagccc-------------cagcctcccttcccgtagctgccccagagcggcctcctggcagtgtgtttcctgggagctcaaagtccttcgcttt i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1304134 344 + 1864846 TGGCAC-GAGGAAGGAAGGGCAGCTGCAGGGCTGACGGTGGgaaggggctcaaagccggcca-cccagctcactggt-gcgggagagctaatgtgagctgctggaaactgagaataataagatgcaggaaaagctgtctgcaacccc-----------------ccgtttgcctaaaa-------gtagaacataaatccgcaaaagtgtccccttccctctccagcagag-------------------------cccagg-ccctca-acagcctggaaccag-cccagaggcatttgtgtggggagcctgcctgcagtcc-------------cagcctcccttcccgtagctgccctggagcggcctcctcgcaatgtgtttcctgggagctcaaagtccttcgcttt i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 96935 344 + 287728 TGGCAC-AAAGAAGGACGGGCAGCTGCAGGGTTGACGATGGgaaggggctcaaagccggcca-cccagctccctggtggcgggagagctaacgtgagctgctggaaactgagaagaagcagacgcaggaaaagctgtctgcacccc------------------ccgtttgcctaaaa-------gtagaacataaatccgcagaagtgtccccttccctctccatcagag-------------------------cccagg-ccctca-acagcctggaaccag-cccagaggcatttgtgtggggagcctgactgcagccc-------------cagcctcccttcccgtagctgccccagagcggcctcctcgcaatgtgtttcctgggagctcaaagtccttcgcttt i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90000161 297 - 120129022 --------------------CAACCACAAGTCCGA-GATAGC-------------CTGGCCA--CCTGCCTGCTGG-----GTAGATCT----TGAGATGCAAAAGAATG-----CCACAGGTCTTAGAGAAGCACTCTGTTTCCCC-----------------CTGCTGGTCAAGAAATCCATTGCAGAGTAT-----------------CTCCCCACTCCCTACCAGGAAGAATGAAAG----------GAGACTCCAGG-TCTCTAGGCAGCCACACACT---TCCAGGAACCCACATTAACAACACAG--CTGCCAGCCAGTGGCCAGGAGGCAGTCCCCATTTATCT---------------GCCTATTTGAAGCTTGTTCCCTAGTAAGAAACAACCCTTCTCTTT i mm10.chr12 C 0 I 31 e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1689122 89 + 4416731 I e manLeu1.NW_012103754v1 929035 3735 - 2200435 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=596065.000000 s hg38.chr2_KI270774v1_alt 102771 90 + 223625 ggtcttgcagcttcttggaaaacgattgttcttttgctga-ggggctgtgcagcagagttctaacgatccattcgagtttccatcttgggg s panPan2.chr2A 1340711 90 + 114371477 ggtcttgcagcttcttggaaaatgattgttcttttgctga-ggggctgtgcagcagagttctaacgatccgttcaagtttccatctcgggg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1365797 90 + 1464242 ggtcttgcagcttcttggaaaatgattgttcttttgctga-ggggctgtgcagcagagttctaacgatccgttcgagtttccatctcgggg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1090073 90 + 81552678 ggtcttgcagcttcttggaaaatgattgttcttttgctga-ggggctgtgcagcagagctctaacaatctgtttgagtttccatctcaggg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1421182 90 + 108979918 ggtcttgcagcttcttggaaaatgatggtccttttgttga-ggggctgtgtggccgagttctaactgtccgttcaagtttcgatcttggtg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1393559 90 - 111193037 ggtcttgcagcttcttggaaaatgatggtccttttgttga-ggggctgtgtggccgagttctaactgtccgttcaagtttccatcttgggg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1422030 90 + 3644372 ggtcttgcagcttcttggaaaatgattgtccttttgttga-ggggctgtgtggccgagttctaactgtccgttcaagtttccatcttgggg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1375535 90 - 10304083 ggtcttgcagcttcttggaaaatgattgtccttttgttga-ggggctgtgcagccgagttctaactgtccgttcaagtttccatcttgggg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1451299 90 - 107702431 ggtcttgtagcttcttggaaaatgattgtccttttgttga-ggggctgtgcggccgagttctaactgtccgttcaagtttccatcttgggg i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1369749 87 - 13651311 ggtcttgcagcttcttggaaaatgattgtccttttgttgagggggctgtgcacccgagtt----ctgtctgttcaagtttccatcttgggg i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1370661 90 - 108792865 ggtcttgcagcttcttgaaaatggggtgttcttttcctga-ggggctgtacagtggagttctaactctccctccaagttcccatctcaggg i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1216581 89 - 7082604 ggtcttgcagcttcttggaaat-gggcgttcttttgctga-cgggctgtgcagcagagttctaactgtccctccaagtttccctctggggg i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1304478 87 + 1864846 ggtcttgcagcttcttggaaatggggtgttcttttgctga-ggggctgtgcagcggagttctaactgtccctccaagtttccatctcg--- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 97279 90 + 287728 ggtctcgcagcttcttggaaatggggtgttcttttgctga-ggggctgtgcagcggagttctaactgtccctccaagtttccatctccggg i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90000458 31 - 120129022 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1689122 89 + 4416731 I e manLeu1.NW_012103754v1 929035 3735 - 2200435 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=431456.000000 s hg38.chr2_KI270774v1_alt 102861 68 + 223625 cgctcagggggctccctcgtggaagcag----gagtccaggctaataa-cccctgtgagt---tttcctcctgtga s panPan2.chr2A 1340801 68 + 114371477 cgctcaggggtctccctcgtggaagcag----gagtccaggctaataa-cccctgtgagt---tttcctcctgtga i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1365887 68 + 1464242 cgctcagggggctccctcgtggaagcag----gagtccaggctaataa-cccctgtgagt---tttcctcctgtga i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1090163 68 + 81552678 cgctgagggggctccttcgtggaagcag----gaggccaggctaataa-cccctgtgagt---tttcctcctgtga i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1421272 68 + 108979918 cgctcagggggctccctcgtggaagcag----gaggccaggttaataaccccctgtgtgt---tttcc-cttggga i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1393649 68 - 111193037 cgctcagggggctccctcgtggaagcag----gaggccaggttaataaccccctgtgtgt---tttcc-cttggga i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1422120 68 + 3644372 cgctcagggggctccctcgtggaagcag----gaggccaggttaataaccccctgtgtgt---cttcc-cttggga i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1375625 67 - 10304083 cgctc-gggggctccctcgtggaagcag----gaggccaggttaataa-cccctgtgtgt---tttcctctcgaga i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1451389 69 - 107702431 cgctcagggtgctccctcgtggaagcag----gaggccaggttaataatcccctgtgtgt---tttcctcttggga i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1369836 69 - 13651311 cgctcagggggctccctcgtgggagcag----gaggccaggttaaggaccccctgtgtgt---tttcctcttgtga i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1370751 69 - 108792865 cgctcaaggggctcccttgtggaagcag----gaggccaggttagtaacccgctgtgggt---tttcctcttgcga i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1216670 69 - 7082604 cgctcagggggctccctcgtggaagcgg----gaggccaggttagtagccccctatgggt---tttcctcttgtga i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1304565 49 + 1864846 --------------------gaaagcag----gaggccaggttagtaaccccctgtgggt---tttccccttgtga i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 97369 68 + 287728 cgctca-ggggctcccttgcggaagcag----gaggccaggttagtaacccgctgtgggt---tttcctcttgtga i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90000489 70 - 120129022 TGCCCCAGCAGCTCCCCTGAGAAGTCAGCACACAGACCAAGGT------CTGCTGGCAGCCAGttttctcttgttt i mm10.chr12 I 31 C 0 e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1689122 89 + 4416731 I e manLeu1.NW_012103754v1 929035 3735 - 2200435 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=733595.000000 s hg38.chr2_KI270774v1_alt 102929 91 + 223625 ctctgccttttgtcagtctaattt-caatgcccc-agaaaattaatctaagatgcagggagagaaaaggtttcttcttcccctacaGATGGAT s panPan2.chr2A 1340869 91 + 114371477 ctctgccttttgtcagtctaattt-caatgcccc-agaaaattaatctaagatgcagagagagaaaaggtttcttcttcccctacaGATGGAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1365955 90 + 1464242 ctctgcc-tttgtcagtctaattt-caatgcccc-agaaaattaatctaagatgcagggagagaagaggtttcttcttcccctacaGATGGAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1090231 92 + 81552678 ctctgccttttgtcagtctaatttacgatgcccc-agaaacttaatctaagatgcagggagagaaaaggtttcttcctcccctgcaGATGGAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1421340 92 + 108979918 ctctgccttttgtcagtataatttacaatgcccc-agaaaattaacctaagatgcagggagagaaaaggtttcttcctcccctacaGATGGAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1393717 92 - 111193037 ctctgccttttgtcagtataatttacaatgcccc-agaaaattaacctaagatgcagggagagaaaaggtttcttcctcccctacaGATGGAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1422188 92 + 3644372 ctctgccttttgtcagtataatttacaatgcccc-agaaaattaacctaagatgcagggagagaaaaggtttcttcctcccctacaGATGGAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1375692 92 - 10304083 ctctgccttttgtcagtataatttacaatgcccc-agaaaattaacctaagatgcagggagagaaaaggtttcttcctcccctacGGATGGAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1451458 92 - 107702431 ctctgccttttgtcagtataatttacaatgcccc-agaaaattaacctaagatgcagggagagaaaagatttcttcctcccctacaGATGGAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 932770 92 - 2200435 Ctctgccttttgtcagtataatttacaatgcccc-agaaaattaacctaagatgcagggagagaaaaggtttcttcctcccctacGGATGGAT i manLeu1.NW_012103754v1 M 3735 C 0 s colAng1.NW_012118821v1 1369905 92 - 13651311 ctctgccttttgtcggtataatttacaacgcccc-agaaaattaacctaagatcctgggagagaaaaggtttcttcctcccctGTGGAGGGAC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1370820 93 - 108792865 atgtgccttttgtcagtggaatttaaaatgccccagaaaaatcaatctaagatgcagggagagctgaggttccttcctcccctccaGAGGGAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1216739 92 - 7082604 atgtgcctttcgtcagtcgaatttaaaatgtccc-ggaaaattaatctaaggtgcagggagagctgaggtttcttcctcccctgcaGAGAGAT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1304614 92 + 1864846 atgagccttttgtcagtcgaatttaaaatgcccc-aggaaattaatctaagatgcagggagcactgagtttccttcctcccctgcaGAGGGAT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 97437 86 + 287728 atgtgccttttgtcagtcgaatttaaaatgcccc-agaaaat-----taagatgcagggagagcggaggttccttcctcccctacaGAGGG-T i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90000559 91 - 120129022 atccttcctttgcctgtctaattcattcggcccc-agaaagttgagggaagatgggcaga-agagaaGATGCTCTCCTCTGATGCGGATGAAT i mm10.chr12 C 0 C 0 e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1689122 89 + 4416731 I e panTro5.chr2A 110126965 80344 - 111504155 T a score=2642014.000000 s hg38.chr2_KI270774v1_alt 103020 319 + 223625 GTCAGTCATCTCTATTCAGCCAAGAAGTAGTTAACCTAAACAATGAAAACACCACCGGTTCCAGTAGAGACTTGAGACTATC--TGATGA--GAGTTATGTGTCTCTGGGAGGAAGTTTT-CAATACAGAAATGGATTTATTTT----ATGAAAC-TTAAAAGAC--TAATAATCTGCAAGCCTATAAGAA---TGTTTT----AATTCTGTAAAATATTTTACAATAAGAAAAGAAACTAGAGACTAAGCAACATATGATCAGTTAAACTTGAATAACAATATATTAATATTGGTCAATAACAAGG------AATGATCTCTCTAGTAACTGCCGTTTCCAAG s panPan2.chr2A 1340960 319 + 114371477 GTCAGTCATCTCTATTCAGCCAAGAAGTAGTTAACCTAAACAATGAAAACACCACCAGTTCCAGTAGAGACTTGAGACTATC--TGATGA--GAGTTATGTGTCTCTGGGAGGAAGTTTT-CAATACAGAAATGGATTTATTTT----ATGAAAC-GTAAAAGAC--TAATAATCTGCAAGCCTATAAGAA---TGTTAT----AATTCTGTAAAATATTTTACAATAAGAAAAGAAACTAGAGACTAAGCAACATATGATCAGTTAAACTTGAATAACAATATATTAATATTGGTCAATAACAGGG------AATGATCTCTCTAGTAACTGCCGTTTCCAAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1366045 311 + 1464242 GTCAGTCATCTCTATTCAGCCAAGAAGTACTTAACCTAAACAATGAAAACACCACCAGTTCCAGTAGAGACTTGAGAATATC--TGATGA--GAGTTATGTGTCTCTGGGAGGAAGTTTT-CCATACAGAAATGGATTTATTTT----ATGAAAC-GTAAAAGAC--TAATAATCTGCAAGCCTATAAGAA---TGTTTT----AATTCTGTAAAATATTTTACAATAAGAAAAGAAACTAGAG--------ACATATGATCAGTTAAACTTGAATAACAATATATTAATATTGGTCAATAACAGGG------AATGATCTCTCTAGTAACTGCCGTTTCCAAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1090323 321 + 81552678 GTCAGTCATCTCTATTCAGCCAAGAAGTAGTTAACCTAAACAATGAAAACACCACTGGTTCCAGTAGAGACTGGAGACTATC--TGATGA--GAATTATGTGTCTCTGGGAGGAAGTTTT-CAATACAAAAATGGATTTATTTT----ATGAAAC-TTAAAAGACAATAATAATCTGCAAGCCTATAAAAA---TGTTTT----AATTCTGTAAAACATTTTACAGTAAGAAAAGAAACTAGAGACTAAGCAACATGTGATCAGTTAAACTTAAATAACAATATATTAATATTGGTCAATAACAAGA------AATGATCTCTCTAGTAACTGCCATTTTCAAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1421432 319 + 108979918 GTCAGTCACCTCTATTCAGCCAAGAAGTAGTTAACCTAAACAGTGAAAACACTACCGGTTCCAGCAGACACTTAGGACCATC--TGATGA--GAATTATGTGTCTCTGAT-GGGAGTTTT-CAATACAAAAATGGATTTATTTT----ATGAAAC-TTAAAAGACAATAATAATCTGCAAGCCTATAAAAA---TGTTTT----AATTTTGTGAAATATTTCACAATAAGAAAAGAAACTAGAGACTAAGCAACATGTGATCAGTTAAACTTAAATAACAATATATTAA-ATTTGTCAATAACAAGG------AATGATCTCTCTAGAAACTGCCATTTCCAAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1393809 319 - 111193037 GTCAGTCACCTCTATTCAGCCAAGAAGTAGTTAACCTAAACAGTGAAAACACTACCGGTTCCAGCAGACACTTAGGACCATC--TGATGA--GAATTATGTGTCTCTGAT-GGGAGTTTT-CAATACAAAAATGGATTTATTTT----ATGAAAC-TTAAAAGACAATAATAATCCGCAAGCCTATAAAAA---TGTTTT----AATTTTGTGAAATATTTCACAATAAGAAAAGAAACTAGAGACTAAGCAACATGTGATCAGTTAAACTTAAATAACAATATATTAA-ATTTGTCAATAACAAGG------AATGATCTCTCTAGAAACTGCCATTTCCAAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1422280 314 + 3644372 GTCAGTCACCTCTATTCAGCCAAGAAGTAGTTAACCTAAACAGTGAAAACACCACCGGTTCCAGCAGACACTTAGGACTATC--TGATGA--GAATTATGTGTCTCTGAT-GGGAGTTTT-CAATACAAAAATGGATTTATTTT----ATGAAAC-TTAAAAGACAATAATAATCTGCAAGCCTATAAAAA---TGTTTT----AATTTTGTGAAATATTTCACAAT-----AAGAAACTAGAGACTAAGCAACATGTGATCAGTTAAACTTAAATAACAATATATTAA-ATTTGTCAATAACAAGG------AATGATCTCTCTAGAAACTGCCATTTCCAAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1375784 320 - 10304083 GTCAGTCACCTCTATTCAGCCAAGAAGTAGTTAACCTAAACAGTGAAAACACCACCGGTTCCAGCAGACACTTAGGACTATC--TGAGGA--GAATTATGTGTCTCTGAT-GGGAGTTTT-CAATACAAAAATGGATTTATTTT----ATGAAAC-TTAAAAGACACTAATAATCTGCAAGCCTATAAAAA---TGTTTT----AATTTTGTAAAATATTTCACAATAAGAAAAGAAACTAGAGACTAAGCAACATGTGATCAGTTAAACTTAAATAACAATATATTAATATTTGTCAATAACAAGG------AATGATCTCTCTAGAAACTGCCATTTCCAAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1451550 317 - 107702431 GTCAGTCACCTCTACTCAGCCAAGAAGTCGTTAACCTAAACAGTGAAAACACCACCAGTTCCAGCAGAGACTTGAGACTATC-----TGA--GAATTATCTGTCTCTGAT-GGGAGTTTT-CAATACAAAAATGGATTTATTTT----ATGAAAC-TTAAAAGACAATAATAATCTGCAAGCCTCTAAAAA---TGTTTT----AATTTTGTGAAATATTTCACAATAAGAAAACAAACTAGAGACTAAGCAACAAGTGATCAGTTAAACTTAAATAACAATATATTAATATTTGTCAATAACAAGG------AACGATCTCTCTAGAAACTGCCATTTCCAAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 932862 320 - 2200435 GTCAGTCACCTCTATTCAGCCAAGAAGTAGTTAACCTAAACAGTGAAAACACCACCGGTTCCAGCAGACACTTAGGACTATC--TGATGA--GAATTATGTGTCTCTGAT-GGGAGTTTT-CAATACAAAAATGGATTTATTTT----ATGAAAC-TTAAAAGACACTAATAATCTGCAAGCCTATAAATA---TGTTTT----AATTTTGTGAAATATTTCACAATAAGAAAAGAAACTAGAGACTAAGCAACATGTGATCAGTTAAACTTAAATAACAATATATTAATATTTGTCAATAACAAGG------AATGATCTCTCTAGAAACTGCCATTTCCAAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1369997 320 - 13651311 GTCGGTCACCTGTATTCAGCCAAGGAGTAGTTAACCTAAACAATGAAAACACCACCGGTTCCAGCAGAGGCTTGAGACTATC--TGATGA--GAATTATGTGTCTCTGAT-GGGAGTTTT-CAATACAAAAATGGATTTATTTT----ATGAAAC-TTAAAAGACAATAATAATCTGCAAGCCTATAAAAA---TGTTTT----AATTTTGTAAAATATTTCACAATAAGGAAAGAAACTAGAGACTAAGCAACATGTGATCAGTTAAACTTAAGTAACAATATACTAATATTTGTCAATAACAAGG------AATGATCTCTCTAGAAACTGCCATTTCCAGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1370913 320 - 108792865 GCCAGTTGTCTCTATTCAGCCAAGAAGTAGTTAACCCAAACAGTGAAAACACCTCCGGTTCCAGCAGAGACTTGAGACTATC--TGATGA--GAATTGTGTGTCTCTGGCAGGAAGTTTT--AATACAAAAATGTATTTATTTT----ATGAAAC-TTAAAAGACAGTAATAATCTGTAAGCCtataaaaatattatttt----aattCTGTAAAACATTTTCCAATCAGAAAAGAAACTAGAGACTAAGCA--ATGTGAACGGTTAAACTTAAATAACAATATATTAATATTGATCAATAACGGAA------AATGATCTC-CTAGTAACTGCCATTTCCAAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1216831 307 - 7082604 GCCAGT--------------CAAGAAGCAGTTATCCCAAACAATGAAAATGCTGCCGGTTCCAATGGAGA-TTGAGACTAT---TGATGA--GAATTGTGTGTCTCTGGCAGGAAGCTTT--AATACAAAAATGTATTTATTTT----ATGAAAC-TTAAAAGACAATAATAATCTGTAAGCCTATAAAAATATTGTTTT----AATTCTGTAAAATATTTTCCAATCAGAAAAGAAACTAGAGACTAAGCAACATGTGACTGCTTAGACTTAAATAACAATATATTAATACTGATCCATAACAGAA------AATGATCTCTCTGGTAACCGCCATTTCCAAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1304706 317 + 1864846 GCCAGG--CATCTCTTCAGCCAAGAAGCAGTTAACCCAAACAATGCAAACACTGCTGATTCCAATAGAGACTTGAGAC-ATC--TGATGA--GAATTATGTGTCTCTGGCAGGAAGTTTT--AATACAAAAATGTATTTATTTT----ATGAAAC-TTAAAAGA---TAATAATCTGTAAGCCTATAAAAATATTATTTT----AATTCTGTAAAATATTTTCCAATCAGAAAAGAAACTAGAGACTAAGCAACATGTGACCGGTTAAACTTAAATAACAATATATTAATATTGATGAATAACAGAA------AATGATCTCTCTAGTAACTGCCATTTCCAAG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 97523 315 + 287728 ACCGATCATCTCTATTCAGCCGAGAAGTATTTAACCCAAACAATG-AAACACCGCGGCTCCCAATAGAGACTTGAGACTATC--CGATGA--GAATTGTGTGTCTCTGGCAGGACGTTTT---ATACAGAAATGTATTTAGTTT----ATGAAAC-TTAAAAGACAATAATAATTTGTAAGCCTATAAAAATATTGTTTT----AATTCTGTAAAATATTTTCCAATC--AAAAGAAACTAGAGAGTAAGCAACATGTGACCGGTTAAACT----GAACAATATACTAATATTGATCAATAACAGAA------AATGACCTCTCTAGTAACTGCCATTTCCAAG i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90000650 268 - 120129022 G--AGACACCTCTAGTCATCCCAAACATAATTAATTTA--------AAATCTATCCGGCTCCA-CAGAGAGTTTAGAAGATCACAGAGGA--GAA----GTGTTTCTGTGGGAAATTTTT-CAACAGAAAAAT--CTTTAGTTCAAAGATAAAAT-TTGA--------AATAATC----AACCT----------TTCTTT----AAAGTTGGGCA--------------------AAATGGAAGCATAAGCAATACATGATCGTGATAATTTAAATATCAGC---TTAATATTGGTCAATAATAGGA------TATTAGTTCACTGGCAGCTACTATTCCCCAG i mm10.chr12 C 0 I 2670 s dasNov3.JH576208 1689211 324 + 4416731 GTCAGGAATCTCCATTCATCAAAGaaataattaattttaaaaat----atCCAACTAGTTCTAGCAGAGATTTGAGATTATT--ATAAAATGGAACTATATTTTTCTGTG-GGAAGTTTTTCAACACAGAA------TCATATT----ATACAATATTTGAAGAGAATAAAATTACACAGGGCTATAGAAC---TATCTTTAAAATTTCAGCACACTATTTTATAAGAATAAAAGAATATAAAGAATAAGAACTACATGATAAATTAAGTTTAGATAAAAATATATTAAGATTGGTCAATAATAAGAAACAATAACAATCTCTATAGCAGCTGCTATTTCTAAG i dasNov3.JH576208 I 89 C 0 e otoGar3.GL873658 931936 929 + 5252280 I e panTro5.chr2A 110126965 80344 - 111504155 T a score=6390454.000000 s hg38.chr2_KI270774v1_alt 103339 830 + 223625 CATAGTAGAGAAGGATAAGCATGTTTCTTTATATTTAATCAGTTGGTTCTTAAATAATTGTCAAG-TGCCTGCTGAAAACCAGCCTTTGGTCTTGGTCGTGAATAGCGCAGAACTTTGCAG------------AGCCCTGAAGAGACTCTCAGTGATA-GGATGCATATACACAGGTGGTGTGAGTGACAGAGCTAA-TTT-TTTTTCTGGTACCTAAAGATCAGCAGGATCAAAA---TTTCATAAAGGAA---------GAGCTGGGAGCTTGAGATTGACAATTTCATGAGATGAAGGATAAATTGTGCGTTACCTCCACAG-CTCTGCAACATGGAGATT-GGTCTTGGGCAGGTGGTGGACGTCCTGGATTC--TGA-GGAAGAC-CTGCACGCAATT-CAGTGGGCATCAGG-AGCCTTCAG--ATG-CTTTCATCAAA-GGCACAGGCACAAGCA-GGCCTTGG-TTTAGAAAGGTCACTTGGGTGACAGCAGGAGGGACAGAAGGATGGT----GGGGAGA---TCAGTGCAGGAGCCAGTCAAGA----GCTCCTTCT---------------------ACTAAGGCAGTAGAAAGTGAGACTGACAACGGCCAGGCAGGAGCAGAACGTTCTCCCAGAGACATTATGGGGAAATTCACACCACATGGTGAGTGAAAGGCAAGGAA----AGCCACGGCTGGGCTTCTTGCTTGGGGACTTGAGCTGGTAGGGTGGTTATTTCAGGCTGTTAACACCCCTCAACA--GGGAACAGAGGAGGATGG---CGTGACTCAGGAGAGAAGTTCAAGTGGAAAACGGGCGT----TTGGGAGAGGACCAAAGGAGGGTGAGAGGAGAGGGCAAAGATCAGAGGAGCCAGA----A---ATGCACCCGAGGTGACACTCAC s panPan2.chr2A 1341279 829 + 114371477 CATAGTAGAGAAGGATAAGCATGTTTCTTTGTATTTAATCAGTTGGTTCTTAAATAATTGTCAAG-TGCCTGCTGAAAACCAGCCTTTGGTCTTGGTCGTGAATAGCGTAGAACTTTGCAG------------AGTCCTGAAGAGACTCTCAGTGATA-GGGTGCATATACACAGGTGGTGTGAGTGACAGAGCTAA-TTT-TTTTTCTGGTACCTAAAGATCAGCAGGATCAAAA---TTTCATAAAGGAA---------GAGCTGGGAGCTTGAGATTGACAATTTCATGAGATGAAGGATAAATTGTGCGTTACCTCCACAG-CTCTGCAACATGGAAATT-GGTCTTGGGCAGGCTGTGGACGTCCTGGATTC--TGA-GGAAGAC-CTGCACGCAATT-CAGTGGGCATCAGG-AGCCTTCAG--ATG-CTTTCATCAAA-GGCACAGGCACAAGCA-GGCCTTGG-TTTAGAAAGGTCACTTGG-TGACAGCAGGAGGGACAGAAGGATGGT----GGGGAGA---TCAGTGCAGGAGCCAGTCAAGA----GCTCCTTCT---------------------ACTAAGGCAGTAGAAAGTGAGACTGGCAAGGGCCAGGCAGGAGCAGAATGTTCTCCCAGAGATGTTATGGGGAAATTCACACCACATGGTGAGTGAAAGGCAAGGAA----AGCCATGGCTGGGCTTCTTGCTTGGGGACTTGAGCTGGCAGGGTGGTTATTTCAGGCTATTAACACCCCTCAACA--GGGAACAGAGGAGGATGG---CGTGACTCAGGAGAGAAGTTCAAGTGGAAAACGGGCAT----TTGGGAGAGGACCAAAGGAGGGTGAGAGGAGAGGGCAAAGATCAGAGGAGCCAGA----A---ATGCACCCGAGGTGACACTCAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1366356 822 + 1464242 CATAGTAGAGAAGGATAAGCATGTTTCTTTATATTTAATCAGTTGGTTCTTAAATAATTGTCAAG-TGCCTGCTGAAAACCAGCCTTTGGTCTTGGTCGTGAATAGCGCAGAACTTTGCAG------------AGCCCTGAAGAGACTCTCAGTGATA-GGATGCATATACACAGGTGGTGTGAGTGACAGAGCTAA-TTT-TTTTTCTGGTACCTAAAGATCAGCAGGATCAAAA---TTTCATAAAGGAA---------GAGCTGGGAGCTTGAGATTGACAATTTCATGAGATGAAGGATAAATTGTGCATTACCTCCCCAG-CTCTGCAACATGGAGATT-GGTCTTGGGCAGGTTGTGGACGTCCTGGATTC--TGA-GGAAGAC-CTGCATGCAATT-CAGTGGGCATCAGG-AGCCTTCAG--ATG-CTTTCATCAAA-GGCACAGGCACAAGCA-GGCCTTGG-TTTAGAAAGGTCACTTGGGTGACAGCAGGAGGGACAGAAGGATGGT----GGGGAGA---TCAGTGCAGGAGCCAGTCAAGA----GCTCCTTCT---------------------ACTAAGGCAGTAGAAAGTGAGACTGGCAA-GGCCAGGCAGGAACAGAATGTTCTCCCAGAGATATTATGGGCAAATTCACACCACACGGTGAGTGAAAGGCAAGGAA----AGCCATGGCTGGGCTTCTTGCTT-GGGACTTGAGCTGGCAGGGTGGTTATTTCAGGCTGTTAACACCCCCCAACA--GGGAACAGAGGAGGATGG---CGTGACTCAGGAGAGAAG-TCAAGTGAAA-----GGGT----TTGGGAGAGGACCAAAGGAGGGTGAGAGGAGAGGGCAAAGATCAGAGGAGCCAGA----A---ATGCACCCGAGGTGACACTCAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1090644 837 + 81552678 CATAGTAGAGAAAGATAAGCATGTTTCTTTATATGTAATCAGTTGGTTCTTAAATAATTGTCAAG-TGCCTGCTGAAAACCAGCCTTTGGTCTTGGTCGTGAACAGCGCAGAACTTTGCAG------------AGCCCTGAAGAGACTCTCAGTGATA-GGATGCATATACACAGGTGGTGTGAGTGACAGAGCCAA-TTT-TATTTCTGGTACCTAAAGATCAGCAGGATCAAAA---TTTCATAAAGGAA---------GACCTGGGAGCTGGAGATTGACAATTTCATGGGATGAAGGATAAATTGTGCATTACGTCCACAG-CTCTGCAACATGGAGATC-GGTCTTGGGCAGGTTGTGGACGTCCTGGATTC--TGAGGGAAGAC-CTGCCCGCAATTCCAGTGGGGGTCAGG-AGCCTTCAG--AAGTTTTTTGTCAAAGGGCACAGGCACAAGCAGGGCCTTGGTTTTAGAAAGGTCACTTGGGTGCAAGCAGGAGGGACAGAAGGATGGTG---GGGGAGA---TCAGTGCAGGAGCCAGTCGAGA----GCTCCTTCT---------------------ACTAAAGCAGTAGAAAGTGAGACTGGCAAGGGCCAGGCAGGAGCAGAACATTCTCCCAGAGACATTATGGGGAAATCCACACCACATCGTGAGTGAAAGGCAAGGAA----AGCCACGGCTGGGCTTCTTGCTTGGGGACTTGAGCTGGCAGGGTAGTTATTTCAGGCTGTTAACACCCCCTAACA--GGGAACAGAGGAGGATGG---CGTGACTCAGGAGAGAAGTTCAAGTTGAAAACGGGCAT----TTGGGAGAGGACCAAAGGAGGGTGAGAGGAGAGGGCAAAGATCAGAGGAGCCAGA----A---ATGCACCTGAGTTGACACTCAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1421751 849 + 108979918 CATAGTAGGGAAAGCTAAGCATGTTTCTTTATATTTCATCAGTTGGTTCTTAAATAATTGTCAAGTTGCCTGCTGAAAACCAGCCTTTGGTCTTGGCTGTGAATAGCGCAGAAGTTTGCAG------------AGTCCTGAAGAAACTCTCAGTGACA-GG-TGCATAAACACAGGTGGTGTGAGTGACAGAGCTAA-TATGTTTTTCTGGGACCTAAAGATCAGCAGGATCAAAA---TTTCATAAAGGAA---------GAGCTGGGAGCTTGAGATTGACAATTTCATGAGATGAAGGATAAATTGCATTTTACATCCACAG-CTCTGCAACACAGAGATG-GGTTTTGGGCGGGTTGTGGAAGTCCTGGATTC--TGA-GGAGGAC-CTGCACGCAATT-CCGTGGGCATCAGG-AGCCTTCAG--ATG-CTTTCATCAAA-GGCACAGGCACAAGCA-GGCCTTGT-TTTAGAAAGGTCACTTGGGTGACAGCAGGAGGGACAGAAGGCTGGG----GGAGAGA---TCAGTGCCGGAGACAGTCGAGA----GCTCCTTCTACTAAGGCAGTAGAAAGGGAGACTAAGGCAGTAGAAAGGGAGACTGGCAAGGGCCAGGCAGGAGCAGAACGTTCTACCAGAGATATTATGGGGAAATCAGCACAACACGGCGAATGAAAGGCAAGCAA----AGCCGTGGCTGGGTTTCTGGCTTGGGGACCTGAGCTGGCAGGGTGGTTATTTCAGGCTGTTAATTCCCCCGAGT----GGAACAGAGGAGGATGG---CGTGACTCGGGAGAGAAGTTCAAG-TGAAAACGGGCAT----TTGGGTGAGGACGAAAGGAGGGTGAGAGGAGACGGCAAAGATCAGAGGAGCCAGA----A---ATGCACCCATGGTGACATTCAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1394128 851 - 111193037 CATAGTAGGGAAAGCTAAGCATGTTTCTTTATATTTCATCAGTTGGTTCTTAAATAATTGTCAAGTTGCCTGCTGAAAACCAGCCTTTGGTCTTGGCTGTGAATAGCGCAGAAGTTTGCAG------------AGTCCTAAAGAAACTCTCAGTGACA-GG-TGCATAAACACAGGTGGTGTGAGTGACAGAGCTAA-TTTGTTTTTCTGGTACCTAAAGATCAGCAGGATCAAAA---TTTCATAAAGGAA---------GAGCTGGGAGCTTGAGATTGACAATTTCATGAGATGAAGGATAAATTGCATTTTACATCCACAG-CTCTGCAACATGGAGATG-GGTTTTGGGCGGGTTGTGGAAGTCCTGGATTC--TGA-GGAGGAC-CTGCACGCAATT-CCGTGGGCATCAGG-AGCCTTCAG--ATG-CTTTCATCAAA-GGCACAGGCACAAGCA-GGCCTTGT-TTTAGAAAGGTCACTTGGGTGACAGCAGGAGGGACAGAAGGCTGGG----GGACAGA---TCAGTGCCGGAGACAGTCGAGA----GCTCCTTCTACTAAGGCAGTAGAAAGGGAGACTAAGGCAGTAGAAAGGGAGACTGGCAAGGGCCAGGCAGGAGCAGAACGTTCTACCAGAGATATTATGGGGAAATCAGCACAACACGGCGAATGAAAGGCAAGGAA----AGCCGTGGCTGGGTTTCTGGCTTGGGGACCTGAGCTGGCAGGGTGGTTATTTCAGGCTGTTAATTCCCCCGAGTG--GGGAACAGAGGAGGATGG---CGTGACTCGGGAGAGAAGTTCAAG-TGAAAACGGGCAT----TTGGGTGAGGACGAAAGGAGGGTGAGAGGAGACGGCAAAGATCAGAGGAGCCAGA----A---ATGCACCCATGGTGACATTCAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1422594 851 + 3644372 CATAGTAGGGAAAGCTAAGCATGTTTCTTTATATTTCATCAGTTGGTTCTTAAATAATTGTCAAGTTGCCTGCTGAAAACCAGCCTTTGGTCTTGGCTGTGAATAGCGCAGAAGTTTGCAG------------AGTCCTAAAGAAACTCTCAGTGACA-GG-TGCATAAACACAGGTGGTGTGAGTGACAGAGCTAA-TTTGTTTTTCTGGTACCTAAAGATCAGCAGGATCAAAA---TTTCATAAAGGAA---------GAGCTGGGAGCTTGAGATTGACAATTTCATGAGATGAAGGATAAATTGCATTTTACATCCACAG-CTCTGCAACATGGAGATG-GGTTTTGGGCGGGTTGTGGAAGTCCTGGATTC--TGA-GGAGGAC-CTGCACGCAATT-CCGTGGGCATCAGG-AGCCTTCAG--ATG-CTTTCATCAAA-GGCACAGGCACAAGCA-GGCCTTGT-TTTAGAAAGGTCACTTGGGTGACAGCAGGAGGGACAGAAGGCTGGG----GGAGAGA---TCAGTGCCGGAGACAGTCGAGA----GCTCCTTCTACTAAGGCAGTAGAAAGGGAGACTAAGGCAGTAGAAAGGGAGACTGGCAAGGGCCAGGCAGGAGCAGAACGTTCTACCAGAGATATTATGGGGAAATCAGCACAACACGGTGAATGAAAGGCAAGGAA----AGCTGTGGCTGGGTTTCTGGCTTGGGGACCTGAGCTGGCAGGGTGGTTATTTCAGGCTGTTAATTCCCCCGAGTG--GGGAACAGAGGAGGATGG---CGTGACTCGGGAGAGAAGTTCAAG-TGAAAACGGGCAT----TTGGGTGAGGACGAAAGGAGGGTGAGAGGAGACGGCAAAGATCAGAGGAGCCAGA----A---ATGCACCTATGGTGACATTCAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1376104 818 - 10304083 CACAGTAGGGAAAGATAAGCATGTTTCTTTATATTTCATCAGTTGGTTCTTAAATACTTGTCAAGTTGCCTGCTGAAAACCAGCCTTTGGTCTTGGCCGTGAATAGCGTAGAACTTTGCAG------------AGCCCTGAAGAAACTCTCAGTGACA-GGATGCATAAACACAGGTGGTGTGAGTGACAGAGCTAA-TTTGTTTTTCTGGTACCTAAAGATCAGCAGGATCAAAA---TTTCATAAAGGAA---------GACCTGGGAGCTTGAGATTGACAATTCCATGAGATGAAGGATAAATTGCGTTTTACATCCACAG-CTCTGCAACATGGAGATG-GGTCTTGGGCGGGTTGTGGAAGTGCTGGATTC--TGA-GGAGGAC-CTGCACGCAATT-CCGTGGGCATCACG-AGCCTTCAG--ATG-CTTTCATCAAA-GGCACAGGCACAAGCA-GGCCTTGT-TTTAGAAAGGTCACTTGGGTGACAGAAGGAGGGACAGAAGGCTGGG----GGAGAGA---TCAGTGCTGGAGACAGTCGAGA----GCTCCTTCT---------------------ACTAAGGCAGTAGAAAGGGAGACTGGCAAGGGCCAGGCAGGAGCAGAACGTTCTACCAGAGATATTATGGGGAAATCAGCACAACGTGGCGAATGAAAGGCAAGGAA----AGCCGTGGCTGGGTTTCTGGCTTGGGGACCTGAGCTGGCAGGGTGGTTATTTCAGGCTGTTAATTCGCCCCAATG--GGGAGCAGAGGAGGATGA---CGTGACTCGGGAGAGAAGTTCAAGTTGAAAACGGGCAT----TTGGGTGAGGATGAAAGGAGGGTG--------------AGATCAGAGGAGCCAGA----A---ATGCACCCGTGGTGACATTCAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1451867 831 - 107702431 CATAGTAGGGAAAAATAAGCATGTTTCTTGGCATTTCATCAGTTGGTTCTTAAATAATTGTCAAGTTGCCTGCTGAAAACCAGCCTTTGGTCTTGGCCGTGAATAGCGCAGAACTTTGCAG------------AGCCCTGAAGAAACTCTCAGTGACAGGG-TGCATAAACACAGGTGGTGTGAGTGACAGAGCTGATTTTTTTTTTCTGGTACCTAAAGATCAGCAGGATCAACA---TTTCATAAAGGAA---------GAGCTGGGAGCTTGAGATTGACAGTTTCATGAGATGAAGGATAAATTGAGTTTTACATCCACAG-CTCTGCAACATGGAGATG-GGTTTTGGGCGGGTTGTGGAAGTCCTCGATTC--TGA-GGAGGAC-CTGCACGCAATT-CCGTGGGCATCAGG-AGCCTTCAG--ATG-CTTTCATCAAA-GGCACAGGCACAAGCA-GGCCTTGT-TTTAGAAAGGTCACTTGGGTGACAGCAGGAGGGACAGAAGGATGGG----GGAGAGA---TCAGTGCCGGAGACAGTCGAGA----GCTCCTTCT---------------------ACTAAAGCAGTAGAAAGGGAGACTGGCCAGGGCCAGGCAGGAGCAGAACGTTCTACCAGAGATATTATGGGGAAATCAGCACAACACGGCGAATGAAAGGCAAGGAG----AGCCGTGGCTGGGTTTCTGGCTTGGGGACCTGAGCTGGCA-GCTGGTTATTTCAGGCTGTTAATTCCCCCGAGTG--GGGAGCAGAGGGGGATGG---CGTGACTCGGGAGAGAAGTTCAAG-TGAAAACGGGCAT----TTGGGTGAGGATGAAAGGAGGGTGAGAGGAGACGGCAAAGATCAGAGGAGCCAGA----A---ATGCACCCGTGGTGACATTCAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 933182 830 - 2200435 CACAGTAGGGAAAGATAAGCATGTTTCTTTGTATTTCATCAGTTGGTTCTTAAATACTTGTCAAGTTGCCTGCTGAAAACCAGCCTTTGGTCTTGGCCGTGAATAGCGCAGAACTTTGCAG------------AGCCCTGAAGAAACCCTCAGTGACA-GG-TGCATAAACACAGGTGGTGTGAGTGACAGAGCTAA-TTTGTTTTTCTGGTACCTAAAGATCAGCAGGATCAAAA---TTTCATAAAGGAA---------GAGCTGGGAGCTTGAGATTGACAATTTCATGAGATGAAGGATAAATTGAGTTTTACATCCACAG-CTCTGCAACATGGAGATG-GGTTTTGGGCGGGTTGTGGAAGTCCTGGATTC--TGA-GGAGGAC-CTGCACGCAATT-CCGTGGGCATCAGG-AGCCTTCAG--ATG-CTTTCATCAAA-GGCACAGGCACAAGCA-GGCCTTGT-TTTAGAAAGGTCACTTGTGTGACAGCAGGAGGGACAGAAGGATAGG----GGAGAGA---TCAGTGCCGGAGACAGTCGAGA----GCTCCTTCT---------------------ACTAAGGCAGTAGAAAGGGAGACTGGCAAGGGCCAGGCAGGAGCAGAACGTTCTACCAGAGATATTATGGGGAAATCAGCACAACACGGCGAATGAAAGGCAAGGAA----AGCCGTGGCTGGGTTTCTGGCCTGGGGACCTGAGCTGGCAGGGTGGTTATTTCAGGCTGTTAATTCGCCCCAGTG--GGGAGCAGAGGAGGATGG---CGTGACTCGGGAGAGAAGTTCAAG-TGAAAACGGGCAT----TTGGGTGGGGACAAAAGGAGGGTGAGAGGAGAGGGCAAAGATCAGAGGAGCCAGA----A---ATGCACCCGTGGTGACATTCAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1370317 832 - 13651311 CATAGTAGGGAAAGATAAGCATGTTTCTTTATATTTCATCTGTTGGTTCTTAAATAATTGTCAAG-TGCCTGCTGAAAACCAGCCTTTGGTCTTGGCCATGAATAGCGCAGAACTTTGCAG------------AGCCCTGAAGAAGCTCTCGGTGACA-GGATGCATAAACACAGGCGCTGTGAGTGACAGAGATCATTTTCTTTTTTTGGTACCTAAAGATCAGCAGGATCAAAA---TTTCATAAAGGAA---------GACCTGGGAGCTTGAGATTGACAATTTTATGAGATGAAGGATAAATTGCGTTTTACATCCACAG-CTCTGCCACATGGAGATG-GGTCTCGGGCAGGTTGTGGAAGTCCTGGATTC--TGA-GGAGGAC-CTGCACGCAATT-CTGTGGGCATCAGG-AACCTTCAG--ATG-CTTTCATCAAA-GGCACAGTCACAAGCA-GGCCTTGT-TTTAGAAAGGTCACTTGGGTGACCGCAGGAGGGACAGAAGGATGGG----GGAGAGA---TCAGTGCAGGAGACAGTCGAGA----GCTCCTTCT---------------------ACTAAGGCAGTAGAAAGGGAGACTGGCCAGGGCCAGGCAGGAGCAGAACATTCTACCAGAGATATTATGGGGAAATCAACACAACATGGTGAATGAAAGGCAAGGAA----AGCCATGGCTGGGTTTCTGGCTTGGGGACTTGAGCTGGCAGGGTGGTTATTTCAGGCTGTTAATTCGCCCCAGTG--GGGAATAGAGGAGGATGG---TGTGACTCGGGAGAGAAGTTCAAGTTGAAAATGGGCAT----TTGGGTGAGGATGAAAGGAGGGTGAGAGAAGAGGGCAAAGATCAGAGGAGCCAGA----A---ATGCACCCGCCGTGACATTCAC i colAng1.NW_012118821v1 C 0 M 5150 s calJac3.chr14 1371233 794 - 108792865 CACAGTGGGAAAAGACAAGCA--TTTCTTTGTATTTAATCAGTTGCTTCCTAAATAATTATCCAG-TACCTGCTGAAAACCAGCCTGTGGTCTCAGTCGTGAATAGCGCAGAATTTTGCAG------------AGCC-----------CTCACTGACA-AAATGCACCTACACAGGTGGTGTGAG-GACAGAGCTAA-TTT-TTTTTCTGGTTCTTAAAGTTCAGCAGGATCAAAA---TTTCATAAAGGAA---------AAGCTGGGAGCTTGAGGTTGACAGTTTCATGAGACGAAGGAT-AGTCGTGCACTATGTCCTCAG-CTCTGCGGCGTGGAGGTC-AGTCTTGGCCAGGCTGTGGACGTCCTGAATTC--TGA-GGAGGGT-CTGCGTGCCATC-CCGTGGGCATCCAG-AGCCTTCAG--ATG-CTTCCATCAAA-GGCACAGGCACAGGCA-GACCTTGC-TCTAGAAAGGTCGCTTGGGTGACAGTAGGAGGGAC-GGAGGACGGGAGGT-GCAGGA---TCAGTGCAGGAGCCTGTCGAGA----GCCTCTTCT----------------------------------AGT--GAGAGTCGCAGGTGCCAGGCAGGAGTGAGACATTCTTCCGGAGGGATTGTGGGGAAGTCAGCACAGCAT---------------GGGAA----GACCCTGCCTGGGTTTCTTGCTGGGGGACTGGAGTTCGCAGGGTGATTGTTTCAGGCCATTAACCCCCCTCAATG--GGGAACAGAGGAGGATGG---GGTGGCCCAGGAGAGGCCTTCAAGTTGAAAACAGGCATCTATTTGGGAGAGCATGAAAGGAGGGTGAGAAGAGAGGGTAAAGGTCAGAGGAGCCAGA----AAGGAGGCACCTGGGGTGACGCCAAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1217138 818 - 7082604 CATAGTGGAAAAAGATAAGCA--TTTCTTTGTATTTAATCAGTTGCTTCCTACATAATTATCAAG-TACCTGCTGAAAACCAGCCTTTGGTCTCAGTCACGAATAGTGCAGATTTTTGCAG------------AGCC-----------CTCACTGATA-AAACGCGCGTACACAGGGGGTGTGAGTGACAGAGCTAA--TT-TTTTTCTGGTTC-TAAAGATCAGCAAGATCAAAA---TTTCATAAAGGAA---------AAGCTGGGAGCTTGAGGTTGACAATTTTGTGGGACGAAGGAT-AATCGTGCACTACGTCCTCAG-CTCTGTGGCGTGGAGGTC-GGTCCTGGCCAGGCTGTGGACGTCCTGAATTC--TGA-GGAGGGC-CTGCGTGCCCTT-CCATGGGCATCCAG-AGCCTTCAG--ATG-CTTTCATCAAG-GGCGCAGGCACAGGCA-GGCCTTGT-TCTAGAAAGGTCGCTTGGGTGACAGCAGGCGGGACAGAAGGACGGGAGGTGGGGGGA---TCAGTGCGGGAGCCTGTCCAGA----GCTCCTTCC---------------------ACGAAGGCAGTGGAAC--GTGAGTCGCAGGGGCCAGGCAGGAGTGAGACGTTCTTCCAGCGGGGTTGTGGGGACATCAGCACAGCATGGTGAGTGAACGGCAGGACA----GACCATGCGTGGGTTCCTCGCTGGGGGACTGGGGCGGGCAGAGGGATTATTTCAGGCCGTTAACTCTTCTCCGTG--GGGAACACAGGAGGATAG---TGTGGCCTGGGAGAGGCGTTCCAGTTGAAAACAGGCATTTATTTGGGAGAGGACGAAAGCAGGGTGAGAGGAGAGGGTAAAGGTCAGAGGAGCCAGA----A---ATGCACCTGGGGCG--GCCAGC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1305023 822 + 1864846 CATAGTAGAAAAAGATAAGCA--TTTATTTGTATTTAATCATTTGCTTCCTAAATAATTATCAAG-TGCCTGCTGAAAACCAGCCTTTGGTCTCAGTTGTGAATAGCGCAGAATTTTGCAG------------AACC-----------CTCACGGATA-AAATGCACATACACAG--GGTGTGAGTGAGAGAGCTAA-TTT-TTTTTCTGGTTTCTAAAGATCAGTAGGATCAAAA---TTTCATAAAGGAA---------AAGCTGGGAGCTTGAGGTTGACAATGTCGTGAGATGAAGGAC-AATCGTACTCTATGTCCTCAG-CTCTGCAGCGTGGAGGTC-GGTCTTGGCCAGGCCGTGGACGTCCTGAATCC--TGA-GCAGGGC-CTGCGTACCATT-CCATGGGCATCCAG-AGCCTTCAG--ATG-CTTTCATCAAA-GGCACAGGCACAGGCA-GGCCTTGT-TCTAGAAAGGCCGCTTGGGTGACAGCAGAAGGGACAGGAGGACGGGAGGTGGGGGGA---TCAGTGCAGGAGCCTGTCGAGA----GCTCCTTCT---------------------ACTGAGGCAGTGGAACATGAGAGTTGCAGGGGCCAGGCAGGAGTGAGACGTTCTTCCAGAGGGGCTGTGGGAACATCAGCACAGCATGGTGAGTGAAGGGCAGGATA----GACCACGCCTGGGTTTCTTGCTGGGGGACTGGAGTGGGCAGGGGGATTATTTCAGGCCATTAACTCCCCTCAGTG--GGGAACAGAGGAGGATGG---CGTGGCCCGGGAGAGGCGTTCAAGTTGAAAACAGGCATTTATTTGGGAGAGGACGAAAGCAGGGTGAGAGGAGAGGGTAAAGGTCAGAGGAGCCAGA----A---ATGCACCTGGGGTGACGCCAAC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 97838 807 + 287728 CATAGTGGGAAA--ACAAGCA--TTTCCTTGTATTTAATCAGTTGCTTCCTAAATAATTATAAAG-TACCTGCTGAAAACCAGCCTTTGGTCTCAGTCGTGAATAGCACAGAATTTTGCAG------------AGCC-----------CTCACTGAGA-AAATGCACGTACACAGGTGGTGTGAGGGACAGAGCTAA-TTT-TTTTTCTGGTTCCTAAAGATCAGCAGGATCAAAA---TTTCATAAAGGAA---------AAGCTGGGAGCTTGAGGTTGACAATTTCGTGAGACGAAGGAT-AATC---------GTCCTCAG-CTCTGCAGCACGGAGGTC-AGTCTTGGCCAGGCTGTGGACGTCCTGAATTC--TGA-GGAGGGC-CTGCGTGCAATT-CCATGGGCATCCAG-AGCCTTCAG--ATG-CTTTCATCAAA-GGCACAGGCAGAGGCA-GGTCTTGT-TCTAGAAAGGTCGCTTGGGTGACA-CAGGAGGGACAGGAGGACGGGAGGTGGGGGGA---TCAGTGCAGGAGCCTGTGGAGA----GCTCCTTCT---------------------ACTAAGGCAGTGGAACGTGAGAGTCGCAGGGGCCAGGCAGGAGTGAGACGTTCTTCCAGAGGGATTGTGGGGACAT---CACAGCATGGTGAGTGAACGGCAGGACA----GACCACGCCCGGGTTTCTTGCTGGGGGACTGGAGTTGTCAG-GTGATTATTTCAGGCCATTAACTCCCCTCAGTG--GGGAACAGAGGAGGATGG---CGTGGCCCAGGAGAGGCGTTAAGGTTGAAAACAGGTGTTTA-CTGAGAGAGGACGAAAGGAGGGTGAGAGGGGAGGGTAAAGGTCAGAGGAGCCAGG----A---ATGCACCTGGGGTGATGCCAAC i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1689535 834 + 4416731 GATAGTGGAGACAGATAATT---TTTCTTTATATTTAATCAATTGGTTCTTAAATAATT-TCAAA-T-TCTACTAAGAACCAACCATTTATCCAAGTACTGTAGAG-ATATAAATGTAAAGAAAATAATACCTAACCCTAAAGAAAGTC------ACG-AGACTTACATACACAGTTGACATGACCCAAGGAATTAG-TTTTTTTTTCTGGTGTGTAAAAAGtggaagattcaagaaagactcctagagggggaggtatttgagctgtaaacttgaGTTTGAATATTTTATAACATGGATAAGAAATTGGGCATTATGTACAAAGACACTGAAATATGAAAATTAGGTCATGATCAGATTGTAGGAG-CCTGAATTCCATAA-TAAGGATGCTAGACATAAAT--GGTAGACATTGGGAAATCATCAAATATG-CTTTAATAAAA-GCCAGAAACATATTCA-GGTGTTGT-TCTAGAAAGAGCACTTGGATGATAGCACA----ACCAAAGGATAGG----GGATGGAGATTAAATGCAGAAAACAGATAAGAGGTTGCTCTTTCT---------------------AT--GGGCAGTAGGACTGGGGAATTA----GATAAGGCAA----AAAATATT---TCAGAGGTACTAAGGAGAAATTAACACAACATAGTAAAAGAAAGGGAAAAAAACACAACAACTGCTGAGTGTCTTGCTGTGGAACTTGA-CTTGCTGGGTGACTATTCAAGGCCCTTAACACATGTGGACAATGGAAGAGCAGAAGCATGGATTTGAACTTTAGGAGAGAAGTTCAAGATGAAAATGGATAT----TTTAGATAAGATGAAAG-AGGTTGAGTAGAGAGTGAAAAGACCAGAAGGGCTAAAGACCA---ATGCTC---------------- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90000918 2670 - 120129022 I e otoGar3.GL873658 931936 929 + 5252280 I e panTro5.chr2A 110126965 80344 - 111504155 T a score=179689.000000 s hg38.chr2_KI270774v1_alt 104169 26 + 223625 AGGAGGGAGACCATGGAGAGAAGAGA s panPan2.chr2A 1342108 26 + 114371477 AGGAGGGAGACCATGGAGAGAAGAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1367178 26 + 1464242 AGGAGGGAGACCATGGAGAGAAGAGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1091481 26 + 81552678 GGGAGGGAGACCATGGAGAGAAGAGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1422600 26 + 108979918 GGGAGGGAGACCGTGGAGGGAAGAGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1394979 26 - 111193037 GGGAGGGAGACCGTGGAGGGAAGAGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1423445 26 + 3644372 GGGAGGGAGACCGTGGAGGGAAGACA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1376922 22 - 10304083 ----GGGAGACCGTGGAGGGAAGAGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1452698 26 - 107702431 GGGAGGGAGACCGTGGAGGGAAGAGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 934012 26 - 2200435 GGGAGGGAGACCATGGAGGGAAGAGA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1372027 26 - 108792865 AGGAGGGAGACCACTGGGGGAAGAGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1217956 26 - 7082604 AGGAGGGAGACCACTGAGGGACGAGA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1305845 26 + 1864846 AGGAGGGAGACCACTGAGGGAAGAGA i cebCap1.NW_016107827v1 C 0 I 143 s aotNan1.NW_018513311v1 98645 26 + 287728 AGGAGGGAGACCACTGAGGGAAGAGA i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1690369 14 + 4416731 GGTATGGAGGCTAT------------ i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90000918 2670 - 120129022 I e otoGar3.GL873658 931936 929 + 5252280 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=12709.000000 s hg38.chr2_KI270774v1_alt 104195 2 + 223625 GC s panPan2.chr2A 1342134 2 + 114371477 GC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1367204 2 + 1464242 GC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1091507 2 + 81552678 GC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1422626 2 + 108979918 GC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1395005 2 - 111193037 GC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1423471 2 + 3644372 GC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1376944 2 - 10304083 GC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1452724 2 - 107702431 GC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 934038 2 - 2200435 GC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1372053 2 - 108792865 AC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1217982 2 - 7082604 GC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 98671 2 + 287728 AC i aotNan1.NW_018513311v1 C 0 I 14 e mm10.chr12 90000918 2670 - 120129022 I e cebCap1.NW_016107827v1 1305871 143 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1690383 0 + 4416731 C e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=67669.000000 s hg38.chr2_KI270774v1_alt 104197 18 + 223625 CACAGTGACCGAGGCTGA s panPan2.chr2A 1342136 18 + 114371477 CACAGTGACCGAGGCTGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1367206 18 + 1464242 CACAGTGACCGAGGCTGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1091509 18 + 81552678 CACGGTGACCAAGGCTGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1422628 18 + 108979918 CACGGTGACCGAGGCTGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1395007 18 - 111193037 CACGGTGACCGAGGCTGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1423473 18 + 3644372 CACGGTGACCGAGGCTGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1376946 18 - 10304083 CACGGTGACCGAGGCTGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1452726 18 - 107702431 CACGGTGACTGAGGCTGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 934040 18 - 2200435 CACGGTGACCGAGGCTGG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1372055 10 - 108792865 --------CTGGGGCTGC i calJac3.chr14 C 0 I 2 s saiBol1.JH378218 1217984 5 - 7082604 --------CTGGG----- i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 98673 14 + 287728 I e mm10.chr12 90000918 2670 - 120129022 I e cebCap1.NW_016107827v1 1305871 143 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1690383 0 + 4416731 C e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=365343.000000 s hg38.chr2_KI270774v1_alt 104215 64 + 223625 GAGAGAGAGTGGCCAGAGA-CTGAAAGCAAAAGGCACGACGGCCGGGAGCACTGAACGCTTGCCA s panPan2.chr2A 1342154 64 + 114371477 GAGAGACAGTGGCCAGAGA-CTGAAAGCAAAAGGCACAACGGCCGGGAGCACTGAACGCTTGCCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1367224 64 + 1464242 GAGAGAGAGTGGCCAGAGA-CTGAAAGCAAAAGGCACAACGGCCGGGAGCACTGAACGCTTGCCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1091527 64 + 81552678 GAGAGAGAGTGGCCAGAGA-TTGAAAGCAAAAGGCACGACGGCCGGGAGCACTGAGCGCTTGCCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1422646 63 + 108979918 GAGAGGGAGCGGCCAGAAA-CTGAAAGCAGAAGGCACGACGGCCGGGAGCACTGAG-GCTTGCCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1395025 63 - 111193037 GAGAGGGAGCGGCCAGAAA-CTGAAAGCAGAAGGCACGACGGCCGGGAGCACTGAG-GCTTGCCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1423491 63 + 3644372 GAGAGGGAGCGGCCAGAAA-CTGAAAGCAGAAGGCACGACGGCCGGGAGCACTGAG-GCTTGCCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1376964 63 - 10304083 GAGAGGGAGCGGCCAGAAA-CTGAGAGCAGAAGGCACGGCGGCCGGGAGCACTGAG-GCTTGCCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1452744 63 - 107702431 GAGAGCGAGCGGCCAGAAA-CTGAAAGCAGAAGGCACGACGGCCGGGAGCACTGAG-GCTTGCCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 934058 63 - 2200435 GAGAGGGAGCGGCCAGAAA-CTGAAAGCAGAAGGCACGACGGCTGGGAGCACTGAG-GCTTGCCA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1372067 64 - 108792865 CTGACAGAGCGGCCAGAGG-CCGAAAGCAAAAGGCGGGACGGTCGGGAGCACTGAGCGCTTGGCA i calJac3.chr14 I 2 C 0 s saiBol1.JH378218 1217989 62 - 7082604 --GACTGAGCGGCCAGAGG-CTGAAAGCAAAAGGCGCGAGGGTCGGGAGCGCTGAGTGCTTGCCA i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 98687 64 + 287728 GAGAGAGAGCGGCCAGAGG-CTGAAAGCAAAAGGCACCAGGATCTGGAGCACTGAGCGCTTGCCA i aotNan1.NW_018513311v1 I 14 C 0 s dasNov3.JH576208 1690383 37 + 4416731 -----AGGGTAGTCAAAGACCTAGGAGTAGAA----------CCAGGAGAAA------------- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90000918 2670 - 120129022 I e cebCap1.NW_016107827v1 1305871 143 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=5500.000000 s hg38.chr2_KI270774v1_alt 104279 1 + 223625 G s panPan2.chr2A 1342218 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1367288 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1091591 1 + 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1422709 1 + 108979918 G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1395088 1 - 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1423554 1 + 3644372 G i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1377027 1 - 10304083 G i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1452807 1 - 107702431 G i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 934121 1 - 2200435 G i manLeu1.NW_012103754v1 C 0 C 0 s dasNov3.JH576208 1690420 1 + 4416731 G i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 98751 0 + 287728 C e mm10.chr12 90000918 2670 - 120129022 I e saiBol1.JH378218 1218051 0 - 7082604 C e cebCap1.NW_016107827v1 1305871 143 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e calJac3.chr14 1372131 0 - 108792865 C e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=234452.000000 s hg38.chr2_KI270774v1_alt 104280 61 + 223625 GCCC----TGGACCAAAAGCCGTGCAAACCTCTC----------------------------------------------------------------------TGTAAAACCATCCTAAGACGTAACTCTGTGC s panPan2.chr2A 1342219 61 + 114371477 GCCC----TGGACCAAAAGCCGTGCAAACCTCTC----------------------------------------------------------------------TCTAAAACCATCCTAAGACGTAACTCTGTGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1367289 61 + 1464242 GCCC----TGGAACAAAAGCTGTGCAAACCTCTC----------------------------------------------------------------------TCTAAAACCATCCTAAGACGTAACTCTGTGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1091592 131 + 81552678 GCCC----TGGACCAAAAGCCGTGCAAACCTCTCTCTAAAACCATCCTAAGACGTAACTCTGCATGCTTACCAGGCCCTCGGCCCAGAGCTGTGAAAACTTCTTTCTAAAACCATCCTAAGACGTAACTCTGCGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1422710 61 + 108979918 GCCC----TCAGCCAAAAGCCGTGCGAACTTCTC----------------------------------------------------------------------TCTAAAACCATCCTAAGACATAACTCTGCGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1395089 61 - 111193037 GCCC----TCAGCCAAAAGCCGTGCGAACTTCTC----------------------------------------------------------------------TCTAAAACCATCCTAAGACGTAACTCTGCGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1423555 61 + 3644372 GCCC----TCAGCCAAAAGCCGTGCGAACTTCTC----------------------------------------------------------------------TCTAAAACCATCCTAAGACGTAACTCTGCGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1377028 61 - 10304083 GCCC----TCAGCCAAAAGCCGTGCAAACTTCTC----------------------------------------------------------------------TCTAAAACCATCCTAAGACGTAGCTCTGCGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1452808 61 - 107702431 GCCC----TCAGCCAAGAGCTGTGCAAACTTCTC----------------------------------------------------------------------TCTAAAACCATCCTAAGACATAACTCTGCGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 934122 61 - 2200435 GCCC----TCAGCCAAGAGCCGTGCAAACTTCTC----------------------------------------------------------------------TCTAAAACCATCCTAAGACGTAACTCTGCGC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1372131 61 - 108792865 GCCC----GAGGTCAAGAGCCCTGCAAACTTCTC----------------------------------------------------------------------TCTAAAGCCATCCTAAGACGTCACTGTGCGC i calJac3.chr14 C 0 T 61 s dasNov3.JH576208 1690421 36 + 4416731 GCACATGGTAGATTAAAAA-------------------------------------------------------------------------------------TCTAA---CTTTCTAGGA-----------GC i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 98751 0 + 287728 C e mm10.chr12 90000918 2670 - 120129022 I e saiBol1.JH378218 1218051 0 - 7082604 C e cebCap1.NW_016107827v1 1305871 143 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=39783.000000 s hg38.chr2_KI270774v1_alt 104341 27 + 223625 ACTTGCCAGGCCCTCA-----------GCCCAGAGCCG s panPan2.chr2A 1342280 27 + 114371477 ACTTGCCAGGCCCTCA-----------GCCCAGAGCCG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1367350 27 + 1464242 ACTTGCCAGGCCCTCA-----------GCCCAGAGCCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1091723 27 + 81552678 ACTTGCCAGGCCCTCG-----------GCCCAGAGCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1422771 16 + 108979918 ACTTGCCAGGCCCTCA---------------------- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1395150 27 - 111193037 ACTTGCCAGGCCCTCAGCCAAGAGCTG----------- i macFas5.chr13 C 0 T 97 s macNem1.NW_012011978v1 1423616 16 + 3644372 ACTTGCCAGGCCCTCA---------------------- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1377089 16 - 10304083 ACTTGCCAGGCCCTCA---------------------- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1452869 16 - 107702431 ACTTGCCAGGCCCTGA---------------------- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 934183 16 - 2200435 ACTTGCCAGGCCCTCA---------------------- i manLeu1.NW_012103754v1 C 0 C 0 s dasNov3.JH576208 1690457 12 + 4416731 ACTT--CAAATTCA------------------------ i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 98751 0 + 287728 C e mm10.chr12 90000918 2670 - 120129022 I e saiBol1.JH378218 1218051 0 - 7082604 C e cebCap1.NW_016107827v1 1305871 143 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e calJac3.chr14 1372192 61 - 108792865 T e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=12486.000000 s hg38.chr2_KI270774v1_alt 104368 24 + 223625 TGCAAACTTCTCTCTTCAGAGCAC s panPan2.chr2A 1342307 24 + 114371477 TGCAAACTTCTCTCTTCAGAGCAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1367377 24 + 1464242 TGCAAACTTCTCTCTTCAGAGCAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1091750 24 + 81552678 TGCAAACTTCTCTCTTCAGAGCAC i nomLeu3.chr19 C 0 C 0 s dasNov3.JH576208 1690469 11 + 4416731 TTAGAACTTCt------------- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 98751 0 + 287728 C e mm10.chr12 90000918 2670 - 120129022 I e saiBol1.JH378218 1218051 0 - 7082604 C e cebCap1.NW_016107827v1 1305871 143 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e calJac3.chr14 1372192 61 - 108792865 T e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e manLeu1.NW_012103754v1 934199 0 - 2200435 C e chlSab2.chr14 1452885 0 - 107702431 C e cerAty1.NW_012000820v1 1377105 0 - 10304083 C e macNem1.NW_012011978v1 1423632 0 + 3644372 C e macFas5.chr13 1395177 97 - 111193037 T e rheMac8.chr13 1422787 0 + 108979918 C e panTro5.chr2A 110126965 80344 - 111504155 T a score=7252.000000 s hg38.chr2_KI270774v1_alt 104392 9 + 223625 ACTTGCGAG s panPan2.chr2A 1342331 9 + 114371477 ACTTGCGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1367401 9 + 1464242 ACTTGCGAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1091774 9 + 81552678 ACTTGCGAG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1395080 9 - 111193037 GCTTGCCAG i macFas5.chr13 T 97 C 0 e aotNan1.NW_018513311v1 98751 0 + 287728 C e mm10.chr12 90000918 2670 - 120129022 I e saiBol1.JH378218 1218051 0 - 7082604 C e cebCap1.NW_016107827v1 1305871 143 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e dasNov3.JH576208 1690480 0 + 4416731 C e calJac3.chr14 1372192 61 - 108792865 T e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e manLeu1.NW_012103754v1 934199 0 - 2200435 C e chlSab2.chr14 1452885 0 - 107702431 C e cerAty1.NW_012000820v1 1377105 0 - 10304083 C e macNem1.NW_012011978v1 1423632 0 + 3644372 C e rheMac8.chr13 1422787 0 + 108979918 C e panTro5.chr2A 110126965 80344 - 111504155 T a score=74920.000000 s hg38.chr2_KI270774v1_alt 104401 18 + 223625 GCCCTCGGCCAAGAGCTG s panPan2.chr2A 1342340 18 + 114371477 GCCCTCGGCCAAGAGCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1367410 18 + 1464242 GCCCTCGGCCAAGAGCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1091783 18 + 81552678 GCCCTCGGCCAAGAGCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1422787 11 + 108979918 -------GCCAAGAGCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1395089 18 - 111193037 GCCCTCAGCCAAAAGCCG i macFas5.chr13 C 0 I 70 s macNem1.NW_012011978v1 1423632 11 + 3644372 -------GCCAAGAGCTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1377105 11 - 10304083 -------GCCAAGAGCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1452885 11 - 107702431 -------GCCAAGAGCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 934199 11 - 2200435 -------GCCAAGAGCTG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1372131 18 - 108792865 GCCCGAGGTCAAGAGCCC i calJac3.chr14 T 61 C 0 s saiBol1.JH378218 1218051 18 - 7082604 GCCCGCGGTCAAGAGCCC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 98751 18 + 287728 GCCCGCGGTCAAGAGCCC i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1690480 11 + 4416731 -------gccaagggtat i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90000918 2670 - 120129022 I e cebCap1.NW_016107827v1 1305871 143 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=274187.000000 s hg38.chr2_KI270774v1_alt 104419 49 + 223625 TGCAAACTTCTCTCTA---------AAACCATCCTAAGATGTAACTCTGCAGCTAGGA s panPan2.chr2A 1342358 49 + 114371477 TGCAAACTTCTCTCTA---------AAACCATCCTAAGATGTAACTCTGCAGCTAGGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1367428 49 + 1464242 TGCAAACTTCTCTCTA---------AAACCATCCTAAGATGTAACTCTACAGCTAGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1091801 49 + 81552678 TGCAAACTTCTCTCTA---------AAACCATCCTAAGATGTAACTCTGCAGCTAGGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1422798 49 + 108979918 TGCAAACTTCTCTCTA---------GAACGATCCTGCCAGGTAACTCTGCCGCTAGGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1395177 49 - 111193037 TGCAAACTTCTCTCTA---------GAACGATCCTGCCAGGTAACTCTGCCGCTAGGA i macFas5.chr13 I 70 C 0 s macNem1.NW_012011978v1 1423643 49 + 3644372 TGCAAACTTCTCTCTA---------GAACGATCCTGCCAGGTAACTCTGCCGCTAGGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1377116 49 - 10304083 TGTAAACTTCTCTCTA---------GAACGATCCTGCCATGTAACTCTGCCACTAGGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1452896 49 - 107702431 TGCAAACTTCTCTCTG---------AAACTATCCTGCCATGTAACTCTGCCGCTAGGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 934210 49 - 2200435 TGCAAACTTCTCTCTA---------GAACGATCCTGCCATGTAACTCTGCCGCTAGGA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1372149 49 - 108792865 TGCAAACTTCTCTCTA---------AAGCCATCCTAAGACGTCACTGTGCGCCTAGCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1218069 49 - 7082604 TGAAAACTTCTCTCTA---------AAAGCAGCCTAAGACGTCACCCTGCGGCTAGCA i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 98769 49 + 287728 TGCAAACTTCTCTCTA---------AAACCATCCTAAGACGTCACTCTGCGGCTAGCA i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1690491 58 + 4416731 aacataattctctttataaccctcgaaacaattctatgaagtaattatcataaaaggt i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90000918 2670 - 120129022 I e cebCap1.NW_016107827v1 1305871 143 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=965111.000000 s hg38.chr2_KI270774v1_alt 104468 131 + 223625 GAGAAAACCG-------------CGCCAGGT---GAAGTGAGCTGC---CGCGTCACTCGGAGATTGATTTGTCTCACTCCAGAGCCCATGGCCGTCACCCCTCTGCCACTTAAGAATGCCGGCAACATCCCAAAAGCACCAGAGTCCTG s panPan2.chr2A 1342407 131 + 114371477 GAGAAAACCG-------------CGCCAGGT---GAAGTGAGCTGC---CGCGTCACTCGGAGATTGATTTGTCTCACTCCAGAGCCCATGGCCGTCACCCCTCTGCCACTTAAGAATGCCGGCAACATCCCAAAAGCACCAGAGTCCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1367477 131 + 1464242 GAGAAAACTG-------------CGCCAGGT---GAAGTGAGCTGC---CGCGTCACTCGGAGATTGATTTGTCTCACTCCAGAGCCCATGGCCGTCACCCTTCTGCCACTTAAGAATGCCGGCAACATCCCAAAAGCACCAGAGTCCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1091850 131 + 81552678 GAGAAAACTG-------------CGCCAGGT---GAAGTGAGCTGC---CGCGTCACTCGGAGATTGATTTGTCTCACTCCAGAGCCCATGGCCGTCACCCCTCTGCCACTTAAGAATGCCGGCAACATCCCAAAAGCACCAGAGTCCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1422847 131 + 108979918 GAGAAAGCTG-------------CGCCAGGT---GAAGGGGTCCGC---TGCGTCACTCGGAGATTGATTTGTCTCACTCCAGAGCTCATGGCCGTCACCCCTCTGCCACCTAAGAATGCCGGCAACATCCCAAAAGCACCAGAGTCCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1395226 131 - 111193037 GAGAAAGCCG-------------CGCCAGGT---GAAGGGGTCCGC---TGCGTCACTCGGAGATTGATTTGTCTCACTCCAGAGCTCATGGCCGTCACCCCTCTGCCACCTAAGAATGCCGGCAACATCCCAAAAGCACCAGAGTCCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1423692 130 + 3644372 GAGAAAGCCG-------------CGCCAGGT---GAAGGGGTCCG----TGCGTCACTCGGAGATTGATTTGTCTCACTCCAGAGCTCATGGCCGTCACCCCTCTGCCACCTAAGAATGCCGGCAACATCCCAAAAGCACCAGAGTCCTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1377165 131 - 10304083 GAGAAAGCCG-------------CGCCAGGT---GAGGTGGTCTGC---TGCGTCACTCGGAGATTGATTTGTCTCACTCCAGAGCTCATGGCCGTCACCCCTCTGCCACCTAAGAATGCCGGCAACATCCCAAAAGCACCAGAGTCCTA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1452945 131 - 107702431 GAGAAAGCCG-------------CGCCAGGT---GAAGTGGTCTGC---TGCGTCACTCGGAGATTGATTTGTCTCACTCCAGAGCTCATGGCCGTCACCCCTCTGCCACCTAAGAATGCCGGCAACATCCCAAAAGCACCAGAGTCCTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 934259 131 - 2200435 GAGAAAGCCG-------------CGCCAGGT---GAGGTGGTCTGC---TGCGTCACTCGGAGATTGATTTGTCTCACTCCAGAGCCCATGGCCGTCACCCCTCTGCCACCTAAGAATGCCGGCAACATCCCAAAAGCACCAGAGTCCTG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1372198 129 - 108792865 GAGAAAACCG-------------TGCAAGGT---GAAGTGATCTG----TGCGTCATGCGGAGGCAGATTGGTCTCACTCCAGAGCCCATGGCCGTCACCCCTCTGCCACTTAAGAATGCCAG-AACACCCCAAAAGCACCAGAGTCTTG i calJac3.chr14 C 0 I 5 s saiBol1.JH378218 1218118 129 - 7082604 GAGAAAACCG-------------TGCAAGGT---GAAGTGACCTGC---TACGTCACGC-GAGGCAGACTGGTCTCGCTCCAGAGCCCATGGCCGTCACCCCTCTGCCACTTAAGGATGCCGG-AACATCCCAAAAGCGCCAGAGTCGTG i saiBol1.JH378218 C 0 I 5 s cebCap1.NW_016107827v1 1306014 130 + 1864846 GAGAAAACCG-------------TGCAAGGT---GAAGTGATCTGC---TGCGTCACATGGAGGCAGATTGGTCTCACTCCAGAACCCATGGCCGTCACCCCTCTGCCACTTAGGAATGCCAG-AACATCCCAAAAGCACCAGAGTCTTG i cebCap1.NW_016107827v1 I 143 I 31 s aotNan1.NW_018513311v1 98818 129 + 287728 GAGAAAACTG-------------TGCAAGGT---GAAGTGATCTGC---TGCGTCACGTGGAGGCAGATTGGTCTCACTCCAGAGCCCATGGCCGTCACCCC-CTGCCACTTAAGAATGCCAG-AACATCCCAAAAGCACCAGAGTCTTG i aotNan1.NW_018513311v1 C 0 I 33 s dasNov3.JH576208 1690549 142 + 4416731 gagaaaactaaaaaaaactaatttgccaagtcggtaagtgattttcaaaggtacaactcaaaagtaga----tctaacttcaaagcctgtattGATAACAACTCAACTACATAATAATGCTAATAATGTCGC--ATGTACCAAAGTCA-- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90000918 2670 - 120129022 I e otoGar3.GL873658 931936 929 + 5252280 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=8380.000000 s hg38.chr2_KI270774v1_alt 104599 2 + 223625 GG s panPan2.chr2A 1342538 2 + 114371477 GG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1367608 2 + 1464242 GG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1091981 2 + 81552678 GG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1422978 2 + 108979918 GG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1395357 2 - 111193037 GG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1423822 2 + 3644372 GG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1377296 2 - 10304083 GG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1453076 2 - 107702431 GG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 934390 2 - 2200435 GG i manLeu1.NW_012103754v1 C 0 C 0 s dasNov3.JH576208 1690691 2 + 4416731 AA i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 98947 33 + 287728 I e mm10.chr12 90000918 2670 - 120129022 I e saiBol1.JH378218 1218247 5 - 7082604 I e cebCap1.NW_016107827v1 1306144 31 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e calJac3.chr14 1372327 5 - 108792865 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=8051.000000 s hg38.chr2_KI270774v1_alt 104601 28 + 223625 GAGGTGGGGGGCGGGG-CTGGT-TACTGCA s panPan2.chr2A 1342540 28 + 114371477 GAGGTGGGGGGCAGGG-GTGGT-TACTGCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1367610 27 + 1464242 GAGGT-GGGGGCGGGG-GTGGT-TACTGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1091983 19 + 81552678 GGGTTGGGG----------GGT-TACTGCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1422980 14 + 108979918 GGG---------------TGGT-TACTGTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1395359 14 - 111193037 GGG---------------TGGT-TACTGTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1423824 14 + 3644372 GGG---------------TGGT-TACTGTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1377298 14 - 10304083 GGG---------------TGGT-TACTGTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1453078 14 - 107702431 GGG---------------TGGT-TACTGCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 934392 14 - 2200435 GGG---------------TGGT-TACTGTG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1372332 29 - 108792865 GGGGTGAGGAGCAGGGTGGGGTGCACTGC- i calJac3.chr14 I 5 C 0 s saiBol1.JH378218 1218252 28 - 7082604 GGGGTGAGGAGTGGGGTGGGGT-CCCTGC- i saiBol1.JH378218 I 5 C 0 s dasNov3.JH576208 1690693 20 + 4416731 -------TAGGTAGAG--TAAT-TATTGGA i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 98947 33 + 287728 I e mm10.chr12 90000918 2670 - 120129022 I e cebCap1.NW_016107827v1 1306144 31 + 1864846 I e otoGar3.GL873658 931936 929 + 5252280 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=2051890.000000 s hg38.chr2_KI270774v1_alt 104629 291 + 223625 TTTGGCAAATAAGCGGTCGTGACTGACCACAGAATACAAAATGTGAGTTGAGTTGCCTGGGCAGTTGCAGTGGG--TTT----AGAAGGAAATAAGAGGAAAATAAAGGAAAATTCCAGGTGTCTTATATCTCAAGCTTTTGTGGGAACAGGAGGTTCCCTGATTCTTGAGAGCTGAAAGAAATCTCCATAAAGCCCGGAATGCTGGTCCTT-GAGGTCCACACC----TGCCACCGATCCTGCGACGCCCAGGCCGCC--CCTCCCCTCTCGGCTCCTACTCACTCTTGGTGGCATC-GTCCCA s panPan2.chr2A 1342568 291 + 114371477 TTTGGCAAATAAGCGGTCGTGACTGACCGCAGAATACAAAATGTGAGTTGAGTTGCCTGGGCAGTTGCAGTGGG--TTT----AGAAGGAAATAAGAGGAAAATAAAGGAAAATTCCAGGTGTCTTATATCTCAAGCTTCTGTGGGAACAGGAGGTTCCCTGATTCTTGAGAGCTGAAAGAAATCTCCATAAAGCCCGGAATGCTGGTCCTT-GAGGTCCACACC----TGCCACCGGTCCTGCGACGCCCAGGCCGCC--CCTCCCCTCTCGGCTCCTACTCACTCTTGGTGGCATC-GTCCCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1367637 289 + 1464242 TTTGGCAAATAAGC-GTCGTGACTGACCGCAGAATACAAAATGTGAGTTGAGTTGCCTGGGCAGTTGCAGTGGG--TTT----AGAAGGAAATAAGAGGAAAATAAAGGAAAATTCCAAGTGTCTTATATCTCAAGCTTTTGTGGGAACAGGAGGTTCCCTGATTCTTGAGAGCTGAAAGAAATCTCCATAAAGCCCGGAATGCTGGTCCTT-GAGGTCCACACC----TGCCACCGGTCCTGCGACGCCCAGGCCGCC--CCT-CCCTCTCGGCTCCTACTTACTCTTGGTGGCATC-GTCCCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1092002 291 + 81552678 TTTGGCAAATAAGCGGCCATGGCTGACCTCAGAATACTAAATGTTAGTTGAGTTGCCCGGGCAGTTGCAGTGGG--TTT----AGAAGGAAGTAAGAGGAAAATAAAGGCAAATTCCAAGTGTCTCATATCTCAAGCTTTTGTGGGAACAGGAAGTTCCCTGGCTCTTGAGAGCTGAGAGAAATCTCCATAAAGCCCGGAATGCTGGTCCTT-GAGGTCCATACC----TGCCACCGGTCCTGCGATGCCCAGGCCGCC--CCTCCCCTCTCGGCTCCTACTCACTCTTGGTGGCATC-ATCCCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1422994 292 + 108979918 TTTGGCAAGTAAGCGGCCGTGACTGACCTCAGAATACTAAATGTGAGTTGAGTTGCCCAGGCAGTTGCAGTGGG--TTT----AGAAGGAAATACGAGGAAAATAAACGAAAATTCCAAGTGTCTTATATCTCAAGCTTTTGTGGGAACAGGAAGTTCCCTTGCTCTTGAGAGCTGAAAGAAATCTCCATAAAGCCCAGAATGCTGGTCCTT-GAGGTCCACACC----TGCCACTGGTCCTGAGATGCCCAGGCCGCC--CCTCCTTTTTCGGCTCCTACTCACTCCCACTGGCATTTGTTCCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1395373 292 - 111193037 TTTGGCAAGTAAGCGGCCGTGACTGACCTCAGAATACTAAATGTGAGTTGAGTTGCCCAGGCAGTTGCAGTGGG--TTT----AGAAGGAAATACGAGGAAAATAAACGAAAATTCCAAGTGTCTTATATCTCAAGCTTTTGTGGGAACAGGAAGTTCCCTTGCTCTTGAGAGCTGAAAGAAATCTCCATAAAGCCCAGAATGCTGGTCCTT-GAGGTCCACACC----TGCCACTGGTCCTGCGATGCCCAGGCCGCC--CCTCCTTTTTCGGCTCCTACTCACTCCCACTGGCATCTGTTCCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1423838 292 + 3644372 TTTGGCAAGTAAGCGGCCGTGACTGACCTCAGAATACTAAATGTGAGTTGAGTTGCCCAGGCAGTTGCAGTGGG--TTT----AGAAGGAAATACGAGGAAAATAAACGAAAATTCCAAGTGTCTTATATCTCAAGCTTTTGTGGGAACAGGAAGTTCCCTTGCTCTTGAGAGCTGAAAGAAATCTCCATAAAGCCCAGAATGCTGGTCCTT-GAGGTCCACACC----TGCCACTGGTCCTGCGATGCCCAGGCCGCC--CCTCCTTTTTCGGCTCCTACTCACTCCCACTGGCATCTGTTCCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1377312 292 - 10304083 TTTGGCAAGTAAGCGGCCATGACTGACCTCAGAATACTAAATGTGAGTTGAGTTGCCCAGGCAGTTGCAGTGGG--TTT----AGAAGGAAATACGAGGAAAATAAATGAAAATTCCAAGTGTCTTATATCTCAAGCTTTTGTGGGAATAGGAGGTTCCCTTGCTCTTGAGAGCTGAAAGAAATCTCCATAAAGCCCAGAATGCTGGTCCTT-GAGGTCCACACC----TGCCACCGGTCCTGCGATGCCCAGGCCGCC--CCTCCTTTTTCGGCTCCTACTCACTCCCACTGGCATCCGTTCCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1453092 292 - 107702431 TTTGGCAAGTAAGCGGCCGTGACTGACCTCAGAATACTAAATGTGAGTTGAGTTGCCCAGGCAGTTGCAGTGGG--TTT----AGAAGGAAATACGAGGAAAATAAACGAAAATTCCAAGTGTCTTATATCTCAAGCTTTTGTGGGAATAGGAGGTTCCCTTGCTCTTGAGAGCTGAAAGAAATCTCCATAAAGCCCGGAATGCTGGTCCTT-GAGGTCCACACC----TGCCACCAGTCCTGCGATGCCCAGGCCACC--CCTCCTTTTTCGGTTCCTACTCACTCCCAGTGGCATCCGTTCCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 934406 292 - 2200435 TTTGGCAAGTAAGCGGCCATGACTGACCTCAGAATACTAAATGTGAGTTGAGTTGCCCAGGCAGTTGCAGTGGG--TTT----AGAAGGAAATACGAGGAAAATAAACGAAAATTCCAAGTGTCTTATATCTCAAGCTTTTGTGGGAATAGGAGGTTCCCTTGCTCTTGAGAGCTGAAAGAAATCTCCATAAAGCCCAGAATGCTGGTCCTT-GAGGTCCACACC----TGCCACCGGTCCTGCGATGCCCAGGCCGCC--CCTCCTTTTTCGGCTCCTACTCACTCCCACTGGCATCCGTTCCC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1372361 288 - 108792865 TTTGATAAATAAGCTGCCCTGGCTGACTTCAGAATACAAACTGTGAGTTAAGTTGCCT-GGAAATTGCAGTGGG--TTT----GGAAGGAAATA--AGGAAAATAGATGAAAATTCCAGGTTTCTTATACCTCAAGCTTTTGT-GGAACAGGAGGTTCCCTGGCTCTTGAGAGCTGAAAGACATCTTGGTAAAGCCCTGAATGCTGGTCCTT-GAGGTCTGCCTC----TGCCACTGGTCCTGTGATTCCCAGGCTGCC--CTTCCTCTCTCTGCTCCTACTGACCCCCAGGGGCATCCGTCCCG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1218280 272 - 7082604 TTTGACAAATAAGCTGCC----------TCAGAATACAAACTGTGAGCTGAGTTGCCTGGGAAATTGCAGTGGGAATTTCTAAAGAAGGAAATAAGAGGAAAATAAGTGAAAATTCCCAGTGTCTTATACCTCAAGCTTTTGT-GGAACAGGCGGTTCCCTGGCTCTTGAGA-CTGAAAGGCATCTTGGTAAAGCCCTGAATGCTGGTCCTT-GAGGTCCG------------------CCTGTGATTCCCAGGCTGCC--CTTCCTGTCTCCGCTCCTACTCACTCCCAGAGGCATCTGTCCCA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1306175 289 + 1864846 TTCAACAAATAAGCTGCCATGGCTGACCTCAGAATACAAACTGTGAGCTGAGTTGCCTGGGAAATTGCAGTGGG--TTT----AGAAGGAAATA--AGGAAAATAAATGAAAATTCCAAGTGTCTTATACCTCAAGCTTTTGC-GGAAGAGGAGGTTCCCTGGCTCTTGAGAGCTGAAAGGCATCTTGGTAAAGCCCTGAATGCTGGTCCTT-GAGGTCTGCCTC----TGCCGCCGGTCCTGTGATGACCAGGCTGCC--CTTCCTGTCTCCGCTGCTACTCACTCCCAGGGGCATCTGTCCCA i cebCap1.NW_016107827v1 I 31 C 0 s aotNan1.NW_018513311v1 98980 291 + 287728 TTTGACAAATAAGCTGCCATGGCTGACCTCAGAATCCAAACTGTGAGTTGAGTCGCCTGGGAAATTGCAGCGGG--TTC----AGAAGGAAATAAGAAGAAAATAAATGAAAATTCCAAGTGTCTTATACCTCAAGCCTTTGT-GGAATAGGTGGTTCCCTGGCTCTTGAGAGCTGAAAGGCATCTTGGTAAAGCCCCGAATGCTGCTCCTT-GAGGTCGGCCTC----TGCCACCGGTCCTGTGAGTCCCAGACTGCC--CTTCCTCTCTCTGCTCCTACTCACTCCCAGGGGCATCCGTCCCA i aotNan1.NW_018513311v1 I 33 C 0 s dasNov3.JH576208 1690713 280 + 4416731 -TTTACAAATAAGAGGTCATAGATGACTTCAGAAATTAAAATGCAAATTGAGTTGTGAGACCAGTTACGGTGTG--TTC----AGAAGGGAATAAGGAGAAAATATGTGAAATTCACAAGTGTATTAGAGCCCAGTCTTTTATG-----AGGAGCTTCCTGGTCCCTTGAGAACTAGTGAAATTCCTTTAAAGGTCCAAAACTTTGATCCTTGGAAGTTCAAATCCCGTTTGCAGAGTTCAGTAGATCTCCAGGTCCTTTACCTTCTTCTTGGTTTCCTA-TGTCTCT---TGGCA--------- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90000918 2670 - 120129022 I e otoGar3.GL873658 931936 929 + 5252280 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=379376.000000 s hg38.chr2_KI270774v1_alt 104920 63 + 223625 C---------------ATTGCACTGTCCCCAGCACGCACACATTGGCGTAAAGCCAGG-TCCCCTCTTCAGATTCCACA s panPan2.chr2A 1342859 63 + 114371477 C---------------ATTGCACTGTCCCAAGCACGCACACACTGGCGTAAAGCCAGG-TCCCCTCTTCAGATTCCACA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1367926 63 + 1464242 C---------------ATTGCACTGTCCCAAGCACGCACACATTGGCGTAAAGCCAGG-TCCCCTCTTCAGATTCCACA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1092293 63 + 81552678 C---------------ATTGCACTGTCCCAAGCACGCACACACTGGCGTAAAGCCGGG-TCCCCTGTTCAGATTCCACA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1423286 63 + 108979918 C---------------ATCGCACTTTCCCAAGCATGCACATGCTGGCGCAAAACCGGG-TCCCCTGTTCAGACTCCACA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1395665 63 - 111193037 C---------------ATCGCACTTTCCCAAGCATGCACATGCTGGCGCGAAACCGGG-TCCCCTGTTCAGACTCCACA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1424130 63 + 3644372 C---------------ATCGCACTTTCCCAAGCATGCACATGCTGGCGCAAAACCGGG-TCCCCTGTTCAGACTCCACA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1377604 63 - 10304083 C---------------ATCGCACTTTCCCAAGCATGCACATGCTGGCGCGAAACCGGG-TCCCCTGTTCAGACTCCACA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1453384 63 - 107702431 C---------------ATCGCACTTTCCCAAGCATGCATGTGCTGGCGCGAAACCGGG-TCCCCTGTTCAGACTCCACA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 934698 63 - 2200435 C---------------ATCGCACTTTCCCAAGCATGCACATGCTGGCACGAAACCGGG-TCCCCTGTTCAGACTCCACA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1372649 72 - 108792865 C-------CCCCCCACATTTCACTTCCCTGAGCTCGCCCACGCTGGTGCAAAACTGGGTTCCCCTGTTCAAACTCCACA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1218552 75 - 7082604 C---CCCACCCCCCCAATCTCACTTCCCTGAGCTTGCCCATGCTGGTGCGAAACCGGG-TCCCCTGTTCAGACTCCACA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1306464 78 + 1864846 CCCGCCCCCCCACCCCATCTCACTTCCCCGAGCTCGCCCACGCTGGTGCGAAACTGGG-TCCCCTGTTCAGACTCCACA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 99271 69 + 287728 C--------CCCCTACATCTTACTT-CCTGAGCTCGCCCACGCTGGTGTGAAACCGGG-TCCCCTGTTCAGACTCCACA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 932865 66 + 5252280 ----------CAGTCCCCTGTCCCTTGCTGAGCGTGAGCACACCG--CTAACAGGAGG-CTACCCCTGCAGGCTTCACT i otoGar3.GL873658 I 929 C 0 s dasNov3.JH576208 1690993 54 + 4416731 --------------------CATTCCTCCAGCTAACCACA-GTTCTTCTAA---TAGG-TCCCTTGTTCAAATTCCATA i dasNov3.JH576208 C 0 I 95 e mm10.chr12 90000918 2670 - 120129022 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=418126.000000 s hg38.chr2_KI270774v1_alt 104983 67 + 223625 CCCAGAG--------------CCTGCAGCTCTGACGGCTGTGCTGGGGGTCCCCGGC-G-AGCTGTGAGCCCGTGCTAGGTGT s panPan2.chr2A 1342922 67 + 114371477 CCCAGAG--------------CCTGCAGCTCTGACGGCTGTGCTGGGGGTCCCCGGC-G-AGCTGTGAGCCCGTGCTAGGTGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1367989 67 + 1464242 CCCAGAG--------------CCTGCAGCTCTGACGGCTGTGCTGGGGGTCCCCGGC-A-AGCTGTGAGCCCGTGCTAGGTGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1092356 67 + 81552678 CTCAGAG--------------CCCGCAGCTCTGACGGCTGTGCTGGGGGTCACCGGC-G-AGCTGTGAGCCCATGCTGGGTGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1423349 67 + 108979918 CCCAGAG--------------CCCGCAGCTCTGACGACTGTACTGCGTGGCCCTGGTGG-AGCTGTGAGCCCATGCTGGGTG- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1395728 67 - 111193037 CCCAGAG--------------CCCGCAGCTCTGACGACTGTACTGCGTGGCCCTGGTGG-AGCTGTGAGCCCATGCTGGGTG- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1424193 67 + 3644372 CCCAGAG--------------CCCGCAGCTCTGACGACTGTACTGCGTGGCCCTGGTGG-AGCTGTGAGCCCATGCTGGGTG- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1377667 67 - 10304083 CCCAGAG--------------CCCGCAGCTCTGACGGCTGTACTGCGTGGCCCTGGTGG-AGCTGTGAGCCCATGCTGGGTG- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1453447 67 - 107702431 CCCAGAG--------------CCCGCAGCTCTGACGACTATACTGCGGGGCCCTGGTGG-TGTTGTGAGCCCATGCTGGGTG- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 934761 67 - 2200435 CCCAGAG--------------CCCGCAGCTCTGACGGCTGTACTGCGGGGCCCTGGTGG-AGCTGTGAGCCCATGCTGGGTG- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1372721 68 - 108792865 CCCAGAA--------------CCCACAGCTCTGCTGGCTGTGCTGGGGGTCCCTGATGGAAGCTGTGAGCCCA-GCTGGGTGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1218627 66 - 7082604 CCCAGAG--------------CACGCAGCTCTGCTGGCTGTGCTGGGGG-CCCTGGCGG-AGCTGTGAGCCCA-GCTGGGTGC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1306542 67 + 1864846 CCCAGAG--------------CCTGCAGCTCTGCTGGCTGTGCTGTGGGACCCTGATGG-AGCTGTGAGCCCA-GCTGGGTGC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 99340 67 + 287728 CCCAGAG--------------CCCGCAGCTCTGCTGGCTGTGCTGGGGGGCCCTGGTGG-AGCTGTGAGCCCA-GCTGGGTGC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 932931 76 + 5252280 CCCCAGGGGACAGCACTGGGCCCAGGAGTGGGGGTGGTAGTGCTGGA-----CTGGCAA-AGCTGTGACCCTGGGCGTGGTG- i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90000918 2670 - 120129022 I e dasNov3.JH576208 1691047 95 + 4416731 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=1914434.000000 s hg38.chr2_KI270774v1_alt 105050 275 + 223625 TCCTCCCTCCCTCCTGCCCTTGC---CCCAGGGAGCCCCACACC----------GGGGGGCTCTG---TTCATTGCTCTCTGCCCAACCC---T--GAGGGGTCACCCTCTGCCCCAAGTGCTTAACCACTGGTTACTCATCCCAGAA-CCCAAGAGA-GATCCAGCACGGAGGTTTTCTTAACTTTGCTGTAT--CACACTGTAAGAAACTGGGTGGCCAATGGAACAGA---------CGGAGCAGGGCAGAGTGAGCA-GGAAGAAATGATGCTGGGGAATTTGTGTGCTCCTTGGGTGGGGACGAG s panPan2.chr2A 1342989 275 + 114371477 TCCTCCCTCCCTCCTGCCCTTGC---CCCAGGGAGCCCCACACC----------GGGGGGCTCTG---TTCATTGCTCTCTGCCCAACCC---T--GAGGGGTCACCCTCTGCCCCAAGTGCTTAACCACTGGTTACTCATCCCAGAA-CCCAAGAGA-GATCCAGCACGGAGGTTTTCTTAACTTTGCTGTAT--CACACTGTAAGAAACTGGGTGGCCAACGGAACAGA---------CGCAGCAGGGCAGAGTGAGCA-GGAAGAAGTGATCCTGGGGAATTTGTGTGCTCCTTGGGTGGGGACGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1368056 275 + 1464242 TCCTCCCTCCCTCCTGCCCTTGC---CCCAGGGAGCCCCACACC----------GGAGGGCTCTG---TTCATTGCTCTCTGCCCAACCC---T--GAGGGGTCACCCTCTGCCCCAAGTGCTTAACCACTGGTTACTCATCCCAGAA-CCCAAGAGA-GATCCAGCACGGAGGTTTTCTTAACTTTGCTGTAT--CACACTGTGAGAAACTGGGTGGCCAATGGAACAGA---------CGGAGCAGGGCAGAGTGAGCG-GGAAGAAGTGATGCTGGGGAATTTGTGTGCTCCTTGGGTGGGGACGAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1092423 275 + 81552678 CCCTCCCTCCCTCTTGCCCTTGC---CTCAGGGAGCCCCACACC----------GGGGAGCCCTG---TTCATTGCTCTCTGCCCAACCC---T--GAGGGGTCACCCTCTACCCCAAGTGCTTAACCACTGGTTACTCATCCCAGAA-CCCAAGAGA-GATCCAGCACAGAGGTTTTCTTAACTTTGCTGTAT--TGCACTGTAAGAAACCCGGTGGCCAACGGAACAGA---------CGGAGCAGGGCAGAGTGAGCA-GGAAGAAGTGATGCTGGGGAATTTGTTTGCTCCTTGGGTGGGGACGAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1423416 275 + 108979918 -CCCCCCTCCCTCCCGCCCTGGC---CCCAGGGAGCCCCACACC---------AGGGGGGCTCTG---TTCATTGCTCTCTGCCCAACCC---T--GAGAGGTCACCCTCTGCCCCAAGTGCTTAACCACTGGTTACTCATCCCAGAA-CCCAAGAGA-GATCCATCATGGAGGTTTTCTTAACTTTGTTGTAT--CGCACTGTAAGAAACTGGGTAGACAACGGAACAGA---------CGGAGCAGGGCAGAGTGAGCA-GGAAGAAGGGATGGTGGGGAATTTGTGTGCTCCTTGGGTGGGGACGAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1395795 275 - 111193037 -CCCCCCTCCCTCCCGCCCTGGC---CCCAGGGAGCCCCACACC---------AGGGGGGCTCTG---TTCATTGCTCTCTGCCCAACCC---T--GAGAGGTCACCCTCTGCCCCAAGTGCTTAACCACTGGTTACTCATCCCAGAA-CCCAAGAGA-GATCCATCATGGAGGTTTTCTTAACTTTGTTGTAT--CGCACTGTAAGAAACTGGGTAGACAACGGAACAGA---------CGGAGCAGGGCAGAGTGAGCA-GGAAGAAGGGATGGTGGGGAATTTGTGTGCTCCTTGGGTGGGGACGAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1424260 275 + 3644372 -CCCCCCTCCCTCCCGCCCTGGC---CCCAGGGAGCCCCACACC---------AGGGGGGCTCTG---TTCATTGCTCTCTGCCCAACCC---T--GAGAGGTCACCCTCTGCCCCAAGTGTTTAACCACTGGTTACTCATCCCAGAA-CCCAAGAGA-GATCCATCATGGAGGTTTTCTTAACTTTGTTGTAT--CGCACTGTAAGAAACTGGGTAGACAACGGAACAGA---------CGGAGCAGGGCAGAGTGAGCA-GGAAGAAGGGATGGTGGGGAATTTGTGTGCTCCTTGGGTGGGGACGAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1377734 275 - 10304083 CCCCCCCTCCCTCCCGCCCTGGC---TCCAGGGAGCCCCACACC----------GGGGGGCTCTG---TTCATTGCTCTCTGCCCAACCC---T--GAGAGGTCACCCTCTGCCCCAAGTGCTTAACCACTGGTTACTCATCCCAGAA-CCCAAGAGA-GATCCATCATGGAGGTTTTCTTAACTTTGTTGTAT--CGCACTGTAAGAAACTGGGTAGACAATGGAACAGA---------CGGAGCAGGGCAGAGTGAGCA-GGAAGAAGGGATAGTGGGGAATTTGTGTGCTCCTTGGGTGGGGACGAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1453514 274 - 107702431 -CCCCCCTCCCACCCGCCCTGGC---CCCAGGGAGCCCCACACC----------GGGGGGCTCTG---TTCATTGCTCTCTGCCCAACCC---T--GAGAGGTCACCCTCTACCCCAAGTGCTTAACCACTGGTTACTCATCCCAGAA-CCCAAGAGA-GATCCATCATGGAGGTTTTCTTAACTTTGTTGTAT--CACACTGTAAGAAACTGGGTAGACAACAGAACAGA---------CGGAGCAGGGCAGAGTGAGCA-GGAAGAAGGGATGGTGGGGAATTTGTGTGCTCCTTGGGTGGGGACGAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 934828 277 - 2200435 CCCCCCCTCCCTCCCGCCCTGGC---TCCAGGGAGCCCCACACC----------GGGGGGCTCTG---TTCGTTGCTCTCTGCCCAACCC---T--GAGAGGTCACCCTCTGCCCCAAGTGCTTAACCACTGGTTACTCATCCCAGAA-CCCAAGAGA-GATCCATCATGGAGGTTTTCTTAACTTTGTTGTATCACACACTGTAAGAAACTGGGTAGACAACGGAACAGA---------CGGAGCAGGGCAGAGTGAGCA-GGAAGAAGGGATGGTGGGGAATTTGTGTGCTCCTAGGGTAGGGATGAG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1372789 272 - 108792865 CCCTCCCTCCCTCCTGCCCTTGC---TCCAGGAAGCCCTG---A-----------AAAGCCTCTG---TGCATTGCTCTCTGCCTAACCCCTAT--GAGGGGTCACCCTCTGCCCCCATTGCTTAACCACTGGTAATTCTTCCCAGAACCCCAAGAGA-GATCCGCCATGGA-GTTTTCTTAACCTGGCTCTGT--CACACCAAGAGAAACTGGGTGGTCCAGGGAATGGA---------TGGGGTGGGGCAGAGTGAGTA-GGAAGAAGTGATG--GGGGAGTTTGTTTGCTGCCTGGGTGGGGACCAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1218693 272 - 7082604 CCCTCCCTCCCTCCGGCCCTTGC---TCCAGGAAACCTCACACC-----------AGGGCCTCTG---TGCATTGCTCTCTGCCCAACCC---T--GAGGGGTCACCCTCTGCCCCAAGTGCTTAACCACTGGTGACTCATCCCAGAACCCCAAGAGA-GATCCGCCGTGGA-GTTTTCTTAACTTGGCTGTGT--CACATCAAGAGAAATTGGGTGGTCCAGGCAACGGA---------CGGGGCGGGGCAGAGTGAGTA-GGAAGAAGTGATG--GGGGGCGTTGTTTGCTGCCTGGGTGGGGACCAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1306609 272 + 1864846 CCCTCCCTCCCTCCTGCCCTTGC---TCCAGGAAGCCCCACACC-----------GGGGCCTCTG---TGCATTGCTCTCTGCCCAACTC---T--GAGGGGTCATCCTCTGCCCCGAGTGCTTAACCACTGGAAACTCATCCCAGAACCCCAAGAGA-GATCCGCCATGGA-GTTTTCCTAACCTGACTGTGT--CACACGAAGAGAAATTGGGTGGTCCAGGGAATGGA---------CGGGGCGGGGCAGGGTGAGTA-GGAAGAAGTGACG--GGGGAGTTTGTTTGCTGCCTGGGTGGGGACCAG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 99407 260 + 287728 ccctccctccctcctgccctcgc---tccATGAAGCCCCACACC-----------GGGGCCTCTG---------------TGCCCAACCC---T--GAGGGGTCACCCTCTGCCCCGAGTGCTTAACCACGGGTAACTCATCCCAGAACCCCAAGAGA-GATCCGCCATGGA-GTTTTCTTAACCTGGCTGTGT--CACACCAGGAGAAATTGGGTGGTCCAGGGAACAGA---------CGGGGCGGGGCAGAGTGAGGA-GGAAGAAGTGATG--GGGGAGTTTGTTTGCTGCCTGGGTGGGGACCAG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 933007 247 + 5252280 CCCTCCACCTCTCCCAGC--TGC---TTTCTGCTGCCCTGCCCATGTCCATCCACTTGGGATCTGGCCTTGGTCGCTCCCTGCTGGACCT---G--GGGATGGCACCCTCTGCCCCAAGCACT----CAGTGGCA--TCATCCAGAGC-CCTGAGAGACAATTCATGACGGG-TTCTTCTTAATTTTGTTATAC--TGAGCTCTATGGAATTG----------------------------GTGACAGGGCAGAGAAACCACAGCAGCTCTTATGGTATGGGAT---------------GTGGATAGGGG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1691142 286 + 4416731 TCCTCTCTTCTTCCCACCCTTCCTTGCTCGTCTAGCCCACCTTC-----TCCAGCGAACACTCAG---TTCACCTGGCTCCCCCAGACTG---TTCACGGATTCACAC---GCCCCAAGCAGTCAAGGACTAAGTATGTCTCCCTTAC-CCCAAGCAACCATCTATGATGGGATTTTTCTTAACTTGGTTGACT--ATACTTTTTAAAAGCTTGGTGGTCAAAGGAATAGCAGTTTCACTCTAAGCAGAATTAAATAGGAA-AACAAAATGTATGCTGTAGAAT------AGTTCTTGTTTGGGGGTGGG i dasNov3.JH576208 I 95 I 523 e mm10.chr12 90000918 2670 - 120129022 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=176428.000000 s hg38.chr2_KI270774v1_alt 105325 26 + 223625 CATGGAAGGCGCGTGGGACTGAAGCC s panPan2.chr2A 1343264 26 + 114371477 CATGGAAGGCGCGTAGGGCTGAAGCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1368331 24 + 1464242 CATGGAAGGCGCGT-GGGTTGAAG-C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1092698 26 + 81552678 CATGGAAGGCGCGTGGGGCCGAAGCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1423691 26 + 108979918 CATGGAAGGCACTTGGGGCTGAAGCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1396070 26 - 111193037 CGTGGAAGGCACTTGGGGCTGAAGCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1424535 26 + 3644372 CATGGAAGGCACTTGGGGCTGAAGCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1378009 26 - 10304083 CATGGAAGGCACTTGGGGCTGAAGTC i cerAty1.NW_012000820v1 C 0 I 29 s chlSab2.chr14 1453788 17 - 107702431 CATGGAAGGCACTTGGG--------- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 935105 26 - 2200435 CATGGAAGGCACTTGGGGCTGAAGCC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1373061 26 - 108792865 CATGGAAGGCGCTTGGGGCTGAAGCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1218965 26 - 7082604 CATGGGAGGCACTTGGGGCTGAAGCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1306881 26 + 1864846 CATGGAAGGCGCTTGGGGCTGAAGCC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 99667 26 + 287728 CATGGAAGGCGCTTGGGGCTGAAGCC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 933254 26 + 5252280 CAGGGAGAGTTTTTGGGCCCTGGGTC i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90000918 2670 - 120129022 I e dasNov3.JH576208 1691428 523 + 4416731 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=90430.000000 s hg38.chr2_KI270774v1_alt 105351 38 + 223625 TTGA-AGACCCCGCAGGCGCCTCTCCT---------GGACCGACCTCG s panPan2.chr2A 1343290 38 + 114371477 TTGA-AGACCCTGCAGGCGCCTCTCCT---------GGACCGACATTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1368355 35 + 1464242 TTGA-AGA-CCTGCAGGCGCCTCTCCT----------GACCGACAT-G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1092724 38 + 81552678 TTGA-AGACCCTGCAGGCGCCTCTCCT---------GCACCGACCTCG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1423717 39 + 108979918 TTGAGAGGCGCTGCAGTCGCCTGTCCT---------GGGCTGACCTCG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1396096 39 - 111193037 TTGAGAGGCGCTGCAGTCGCCTGTCCT---------GGGCTGACCTCG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1424561 39 + 3644372 TTGAGAGGCGCTGCAGTCGCCTGTCCT---------GGGCTGACCTCG i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1453805 23 - 107702431 ---------GCTGCAGTCGCCTGTCCT---------GGGCT------- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 935131 32 - 2200435 TTGAGAGGTGCTGCAGTCGCCTGTCCT---------GGACT------- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1373087 24 - 108792865 CTGA-AGAACCTACAGGTGCCTTTC----------------------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1218991 24 - 7082604 TTGA-AGAACCTGCAGGCGCCTCTC----------------------- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1306907 38 + 1864846 TTGA-AGAACCTGCAGGCGCCTCTCCT---------GGGCCAACCTCC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 99693 38 + 287728 TTGA-AGAACCTGCAGGCGCCTCTCCT---------GGGCCGACCTCC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 933280 37 + 5252280 -----------TACACCTGCTCATCCTGCAAGGCCTGGGGTGACCTCA i otoGar3.GL873658 C 0 I 247 e mm10.chr12 90000918 2670 - 120129022 I e dasNov3.JH576208 1691428 523 + 4416731 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e cerAty1.NW_012000820v1 1378035 29 - 10304083 I e panTro5.chr2A 110126965 80344 - 111504155 T a score=12845.000000 s hg38.chr2_KI270774v1_alt 105389 6 + 223625 TGCAGG s panPan2.chr2A 1343328 6 + 114371477 TGCAGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1368390 5 + 1464242 TG-AGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1092762 6 + 81552678 CGCAGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1423756 6 + 108979918 TGCAGG i rheMac8.chr13 C 0 I 1 s macFas5.chr13 1396135 6 - 111193037 TGCAGG i macFas5.chr13 C 0 I 1 s macNem1.NW_012011978v1 1424600 6 + 3644372 TGCAGG i macNem1.NW_012011978v1 C 0 I 1 s cebCap1.NW_016107827v1 1306945 6 + 1864846 TGCAAA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 99731 6 + 287728 TGCAGA i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90000918 2670 - 120129022 I e saiBol1.JH378218 1219015 0 - 7082604 C e otoGar3.GL873658 933317 247 + 5252280 I e dasNov3.JH576208 1691428 523 + 4416731 I e calJac3.chr14 1373111 0 - 108792865 C e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e manLeu1.NW_012103754v1 935163 0 - 2200435 C e chlSab2.chr14 1453828 0 - 107702431 C e cerAty1.NW_012000820v1 1378035 29 - 10304083 I e panTro5.chr2A 110126965 80344 - 111504155 T a score=10236.000000 s hg38.chr2_KI270774v1_alt 105395 11 + 223625 CGCCGCG-CTGG s panPan2.chr2A 1343334 11 + 114371477 CGCCGCG-CTGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1368395 11 + 1464242 CGCCGCG-CTGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1092768 12 + 81552678 CGCCTCTCCTGG i nomLeu3.chr19 C 0 C 0 s cebCap1.NW_016107827v1 1306951 11 + 1864846 CGCCCCG-CTGG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 99737 11 + 287728 TGCCCCG-CTGG i aotNan1.NW_018513311v1 C 0 I 214 e mm10.chr12 90000918 2670 - 120129022 I e saiBol1.JH378218 1219015 0 - 7082604 C e otoGar3.GL873658 933317 247 + 5252280 I e dasNov3.JH576208 1691428 523 + 4416731 I e calJac3.chr14 1373111 0 - 108792865 C e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e manLeu1.NW_012103754v1 935163 0 - 2200435 C e chlSab2.chr14 1453828 0 - 107702431 C e cerAty1.NW_012000820v1 1378035 29 - 10304083 I e macNem1.NW_012011978v1 1424606 1 + 3644372 I e macFas5.chr13 1396141 1 - 111193037 I e rheMac8.chr13 1423762 1 + 108979918 I e panTro5.chr2A 110126965 80344 - 111504155 T a score=-2017.000000 s hg38.chr2_KI270774v1_alt 105406 4 + 223625 ACT---------------------G s panPan2.chr2A 1343345 4 + 114371477 ACC---------------------G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1368406 25 + 1464242 ACCCCGTGCAGGCGCCTCTCCTGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1092780 4 + 81552678 ACC---------------------G i nomLeu3.chr19 C 0 C 0 s cebCap1.NW_016107827v1 1306962 4 + 1864846 GCT---------------------G i cebCap1.NW_016107827v1 C 0 I 123 e aotNan1.NW_018513311v1 99748 214 + 287728 I e mm10.chr12 90000918 2670 - 120129022 I e saiBol1.JH378218 1219015 0 - 7082604 C e otoGar3.GL873658 933317 247 + 5252280 I e dasNov3.JH576208 1691428 523 + 4416731 I e calJac3.chr14 1373111 0 - 108792865 C e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e manLeu1.NW_012103754v1 935163 0 - 2200435 C e chlSab2.chr14 1453828 0 - 107702431 C e cerAty1.NW_012000820v1 1378035 29 - 10304083 I e macNem1.NW_012011978v1 1424606 1 + 3644372 I e macFas5.chr13 1396141 1 - 111193037 I e rheMac8.chr13 1423762 1 + 108979918 I e panTro5.chr2A 110126965 80344 - 111504155 T a score=7297.000000 s hg38.chr2_KI270774v1_alt 105410 15 + 223625 ACCTCGTGCAGGTGC s panPan2.chr2A 1343349 15 + 114371477 ACCTCGCGCAGGCGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1368431 15 + 1464242 CCCTCGTGCAGGCGC i gorGor5.CYUI01015607v1 C 0 I 54 s nomLeu3.chr19 1092784 15 + 81552678 ACCTCGCGCAGGCGC i nomLeu3.chr19 C 0 C 0 e aotNan1.NW_018513311v1 99748 214 + 287728 I e mm10.chr12 90000918 2670 - 120129022 I e saiBol1.JH378218 1219015 0 - 7082604 C e cebCap1.NW_016107827v1 1306966 123 + 1864846 I e otoGar3.GL873658 933317 247 + 5252280 I e dasNov3.JH576208 1691428 523 + 4416731 I e calJac3.chr14 1373111 0 - 108792865 C e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e manLeu1.NW_012103754v1 935163 0 - 2200435 C e chlSab2.chr14 1453828 0 - 107702431 C e cerAty1.NW_012000820v1 1378035 29 - 10304083 I e macNem1.NW_012011978v1 1424606 1 + 3644372 I e macFas5.chr13 1396141 1 - 111193037 I e rheMac8.chr13 1423762 1 + 108979918 I e panTro5.chr2A 110126965 80344 - 111504155 T a score=1153.000000 s hg38.chr2_KI270774v1_alt 105425 11 + 223625 CGC-GCTGGACA s panPan2.chr2A 1343364 12 + 114371477 CTCTCCTGGACA i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1092799 12 + 81552678 CTCTCCTGGACC i nomLeu3.chr19 C 0 C 0 e aotNan1.NW_018513311v1 99748 214 + 287728 I e mm10.chr12 90000918 2670 - 120129022 I e saiBol1.JH378218 1219015 0 - 7082604 C e cebCap1.NW_016107827v1 1306966 123 + 1864846 I e otoGar3.GL873658 933317 247 + 5252280 I e dasNov3.JH576208 1691428 523 + 4416731 I e calJac3.chr14 1373111 0 - 108792865 C e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e manLeu1.NW_012103754v1 935163 0 - 2200435 C e chlSab2.chr14 1453828 0 - 107702431 C e cerAty1.NW_012000820v1 1378035 29 - 10304083 I e macNem1.NW_012011978v1 1424606 1 + 3644372 I e macFas5.chr13 1396141 1 - 111193037 I e rheMac8.chr13 1423762 1 + 108979918 I e gorGor5.CYUI01015607v1 1368446 54 + 1464242 I e panTro5.chr2A 110126965 80344 - 111504155 T a score=4365.000000 s hg38.chr2_KI270774v1_alt 105436 3 + 223625 GAC s panPan2.chr2A 1343376 3 + 114371477 GAC i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1092811 3 + 81552678 GAC i nomLeu3.chr19 C 0 I 28 s cerAty1.NW_012000820v1 1378064 3 - 10304083 GAC i cerAty1.NW_012000820v1 I 29 C 0 s chlSab2.chr14 1453828 3 - 107702431 GAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 935163 3 - 2200435 GAC i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 99748 214 + 287728 I e mm10.chr12 90000918 2670 - 120129022 I e saiBol1.JH378218 1219015 0 - 7082604 C e cebCap1.NW_016107827v1 1306966 123 + 1864846 I e otoGar3.GL873658 933317 247 + 5252280 I e dasNov3.JH576208 1691428 523 + 4416731 I e calJac3.chr14 1373111 0 - 108792865 C e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e macNem1.NW_012011978v1 1424606 1 + 3644372 I e macFas5.chr13 1396141 1 - 111193037 I e rheMac8.chr13 1423762 1 + 108979918 I e gorGor5.CYUI01015607v1 1368446 54 + 1464242 I e panTro5.chr2A 110126965 80344 - 111504155 T a score=32719.000000 s hg38.chr2_KI270774v1_alt 105439 66 + 223625 CTCGTGCAGGCGCCTCTCCTGGACAGACTTCGTGCAGGTGCCGCG-------------------------------------------------------------------------------------CTGGACCGACCTCGTGCAGGC s panPan2.chr2A 1343379 66 + 114371477 CTCGTGCAGCCGCCTCTCCTGGACCGACATTGTGCAGGGCCCACG-------------------------------------------------------------------------------------CTAGACCGACGTCGTGCAGGC i panPan2.chr2A C 0 I 960 s gorGor5.CYUI01015607v1 1368500 66 + 1464242 CTCGTGCAGGCGCCTCTCCTGGACCGACATTGTGCAGGCGCCGTG-------------------------------------------------------------------------------------CTGGACCGACATTGTGCAGGC i gorGor5.CYUI01015607v1 I 54 I 43 s nomLeu3.chr19 1092842 151 + 81552678 CTCGCGCAGGCGCCTCTCCTGCACCGACCTCGCGCAGGCGCCTCTCCTGCACCGACCTCGCGCAGGCGCCTCTCCTGGACCGACCTCGCGCAGGCGCCTCTCCTGCACCGACCTCGCGCAGGCGCCTCTCCTGGACCGACCTCGCGCAGGC i nomLeu3.chr19 I 28 C 0 s cerAty1.NW_012000820v1 1378067 39 - 10304083 CTCGTGCAGTCGCCTCTCCTGGGCTGACCTCGTGCAGGT---------------------------------------------------------------------------------------------------------------- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1453831 46 - 107702431 CTCGTGCAGGTGCCTCTCCTGGGCCAACCTCTTGCAGGTGCCACG-------------------------------------------------------------------------------------T-------------------- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 935166 46 - 2200435 CTCGTGCAGGCGCCTCTCCTGGGCCAACCTCTTGCAGGTGCCACG-------------------------------------------------------------------------------------T-------------------- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1373111 21 - 108792865 ------------------CTGGGCCGACCTCCTGCAGGC---------------------------------------------------------------------------------------------------------------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1219015 21 - 7082604 ------------------CTGGGCCGGCCTCCTGCAGAT---------------------------------------------------------------------------------------------------------------- i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 99748 214 + 287728 I e mm10.chr12 90000918 2670 - 120129022 I e cebCap1.NW_016107827v1 1306966 123 + 1864846 I e otoGar3.GL873658 933317 247 + 5252280 I e dasNov3.JH576208 1691428 523 + 4416731 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e macNem1.NW_012011978v1 1424606 1 + 3644372 I e macFas5.chr13 1396141 1 - 111193037 I e rheMac8.chr13 1423762 1 + 108979918 I e panTro5.chr2A 110126965 80344 - 111504155 T a score=5024.000000 s hg38.chr2_KI270774v1_alt 105505 7 + 223625 GCCGCGC s panPan2.chr2A 1344405 7 + 114371477 GCCGCGC i panPan2.chr2A I 960 C 0 s gorGor5.CYUI01015607v1 1368609 7 + 1464242 GCCGCGC i gorGor5.CYUI01015607v1 I 43 C 0 s nomLeu3.chr19 1092993 7 + 81552678 GCCACGC i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1373132 6 - 108792865 A-CCCGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1219036 7 - 7082604 GCCCCGC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 99748 214 + 287728 I e mm10.chr12 90000918 2670 - 120129022 I e cebCap1.NW_016107827v1 1306966 123 + 1864846 I e otoGar3.GL873658 933317 247 + 5252280 I e dasNov3.JH576208 1691428 523 + 4416731 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e manLeu1.NW_012103754v1 935212 0 - 2200435 C e chlSab2.chr14 1453877 0 - 107702431 C e cerAty1.NW_012000820v1 1378106 0 - 10304083 C e macNem1.NW_012011978v1 1424606 1 + 3644372 I e macFas5.chr13 1396141 1 - 111193037 I e rheMac8.chr13 1423762 1 + 108979918 I e panTro5.chr2A 110126965 80344 - 111504155 T a score=318599.000000 s hg38.chr2_KI270774v1_alt 105512 67 + 223625 TGGGCCATGGGGAGAGCGAGAGCCTGGTGTGCCCTTCAGGGACTTCTATTTGCTTTTAGGAGCCAAT s panPan2.chr2A 1344412 67 + 114371477 TGGGCCATGGGGAGAGTGAGAGCCCGGTGTGCCCTTCAGGGACTTCTATTTGCTTTTAGGAGCCAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1368616 67 + 1464242 TGGGCCATGGGGAGAGCGAGAGCCTGGTGTGCCCTTCAGGGACTTCTATTTGCTTTTAGGAGCCAAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1093000 67 + 81552678 TGGGCCATGGGGAGAGCGAGAGCCTGGTGTCCCCTTCAGGGACTTCTATTTGCTTTTAGGAGCCAAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1423763 67 + 108979918 TGGGCCGTTGGGAGAGTGAGAGCCTGGTGTCCCCTTCAGGGACTTCTATTTGCTTTTAGGAACCAAC i rheMac8.chr13 I 1 C 0 s macFas5.chr13 1396142 67 - 111193037 TGGGCCGTTGGGAGAGTGAGAGCCTGGTGTCCCCTTCAGGGACTTCTATTTGCTTTTAGGAACCAAC i macFas5.chr13 I 1 C 0 s macNem1.NW_012011978v1 1424607 67 + 3644372 TGGGCCGTTGGGAGAGTGAGAGCCTGGTGTCCCCTTCAGGGACTTCTATTTGCTTTTAGGAACCAAC i macNem1.NW_012011978v1 I 1 C 0 s cerAty1.NW_012000820v1 1378106 67 - 10304083 TGGGCCGTTGGGAGAGTGAGAGCCTGGTGTCCCCTTCAGGAACTTCTATTTGCTTTTAGGAACCAAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1453877 61 - 107702431 TGGGCCGTGGG------GAGAGCCTGGTGTCCCCTTCAGGGACTTCTATTTGCTTTTAGGAACCAAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 935212 61 - 2200435 TGGGCCGTGGG------GAGAGCCTGGTGTCCCCTTCAGGGACTTCTATTTGCTTTTAGGAACCAAC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1373138 65 - 108792865 TGGGCCGTGGGGAGAGCAGGAGCCTGGTGTCCCC-TCAGGGTCTTGAATTTGCCTTT-GGAATCCAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1219043 65 - 7082604 TGGGCGGTGTGGAGAGCGGGAGCCTGGTGTCCCC-TCGGGGACTTGTATTTGCATTT-GGAATCCAT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 99748 214 + 287728 I e mm10.chr12 90000918 2670 - 120129022 I e cebCap1.NW_016107827v1 1306966 123 + 1864846 I e otoGar3.GL873658 933317 247 + 5252280 I e dasNov3.JH576208 1691428 523 + 4416731 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=-202.000000 s hg38.chr2_KI270774v1_alt 105579 3 + 223625 TCA--- s panPan2.chr2A 1344479 3 + 114371477 TCA--- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1368683 3 + 1464242 TCA--- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1093067 3 + 81552678 TCA--- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1423830 3 + 108979918 GCA--- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1396209 3 - 111193037 GCA--- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1424674 3 + 3644372 GCA--- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1378173 3 - 10304083 GCA--- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1453938 3 - 107702431 GCA--- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 935273 3 - 2200435 GCA--- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1373203 4 - 108792865 TCAT-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1219108 3 - 7082604 TCA--- i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 933564 3 + 5252280 ---TAC i otoGar3.GL873658 I 247 C 0 e aotNan1.NW_018513311v1 99748 214 + 287728 I e mm10.chr12 90000918 2670 - 120129022 I e cebCap1.NW_016107827v1 1306966 123 + 1864846 I e dasNov3.JH576208 1691428 523 + 4416731 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=324544.000000 s hg38.chr2_KI270774v1_alt 105582 68 + 223625 TTCCTTT----------------------GGTGAAGTA---TTGATGCT--------ACGCAGGTGAATTTAGTAACAGGACTGAC--GTGTGAACATGGCCG s panPan2.chr2A 1344482 68 + 114371477 TTCCTTT----------------------GGTGAAGTA---TTGATGCT--------ACACATGTGAATTTAGTAACAGGACTGAC--GTGTGAACATGGCCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1368686 68 + 1464242 TTCCTTT----------------------GGTGAAGTA---TTGATGCT--------ACACAGGTGAATTTAGTAACAGGACTGAC--GTGTGAACATGGCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1093070 90 + 81552678 TTCCTTTGGTGAAGTATTGATGCTACACAGGTGAAGTA---TTGATGCT--------ACACAGGTGAATTTAGTAACAGGACTGAC--GTGTGAACACGGCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1423833 68 + 108979918 TTCCTTT----------------------GGTGGAGTA---TTGATGCT--------ACGCAGGTGAATTTAGTGACAGGACTGAC--GTGTGAACATGGCCG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1396212 68 - 111193037 TTCCTTT----------------------GGTGGAGTA---TTGATGCT--------ACGCAGGTGAATTTAGTGACAGGACTGAC--GTGTGAACATGGCCG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1424677 68 + 3644372 TTCCTTT----------------------GGTGGAGTA---TTGATGCT--------ACACAGGTGAATTTAGTGACAGGACTGAT--GTGTGAACATGGCCG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1378176 68 - 10304083 TTCCTTT----------------------GGTGGAGTA---TTGATGCT--------ACACAGGTGAATTTAGTGACAGGACTGAC--GTGTGAACATGGCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1453941 68 - 107702431 TTCCTTT----------------------GGTGGAGTA---TTGATGCT--------ACACAGGTGAATTTAGTGACAGGACTCAC--GTGTGAACATGGCCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 935276 68 - 2200435 TTCCTTT----------------------GGTGGAGTA---TTGATGCT--------ACACAGGTGAATTTAGTGACAGGACTGAC--GTGTGAACATGGCTG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1373207 61 - 108792865 TTCCCTT----------------------GACACAGTG---CTGCTGCT--------ACACAAGTGAATTCAGCAGCCG------T--GTGTGAGGATGACC- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1219111 61 - 7082604 TTCCCTT----------------------GATGGAGTG---TTGATGCT--------ACACGAGTGAATTCAGCAGCCG------C--GTGTGACGGTGACT- i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 933567 68 + 5252280 TTCATTG----------------------GATGAAATACATTTATTTCTAAACTCACACAAAGATAAATTTGGCAACTCGTC------------ACATCACA- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1691951 70 + 4416731 TTCCTTT----------------------GATAAATTA---TTGCTTAT--------ACAAAAGATAATTTAGTAATAGAAGTGACTTGTGTGCAAATTACCA i dasNov3.JH576208 I 523 C 0 e aotNan1.NW_018513311v1 99748 214 + 287728 I e mm10.chr12 90000918 2670 - 120129022 I e cebCap1.NW_016107827v1 1306966 123 + 1864846 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=643613.000000 s hg38.chr2_KI270774v1_alt 105650 89 + 223625 GAAACACTTGCCGTCTTCCTGTTACCGCGTCCGGAACTTCACGTTGATACCCAGAAATGGGATCTTAACCTCTTACACATTCCAGGTGC s panPan2.chr2A 1344550 89 + 114371477 GAAACACTTGCCGTCTTCCTGTTACCGCGTCCGGAACTTCACGTTGATACCCAGAAATGGGATCTTAACCTCTTAAACATTCCAGGTGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1368754 89 + 1464242 GAAACACTTGCCGTCTTCCTGTTACCGCGTCCGGAACTTCACGTTGATACCCAGAAATGGGATCTTAACCTCTTAAACATTCCAGGTGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1093160 89 + 81552678 GAAACACTGGCCATCTTCCTGTTACCCCATCCGGAGCTTCATGTTGTTACCCAGAAATGGGATCTTAACCTCTTTAATATTCCAGGTGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1423901 88 + 108979918 GAAGCACTTGCCATCTTCCTGTTACC-CGTCTGGAACTTCACGTTGTTACCCAGAAATGGGATTTTAACCTCTTAAACATTCCAGGTGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1396280 88 - 111193037 GAAGCACTTGCCATCTTCCTGTTACC-CGTCTGGAACTTCACGTTGTTACCCAGAAATGGGATTTTAACCTCTTAAACATTCCAGGTGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1424745 88 + 3644372 GAAGCACTTGCCATCTTCCTGTTACC-CGTCTGGAACTTCACGTTGTTACCCAGAAATGGGATTTTAACCTCTTAAACATTCCAGGTGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1378244 88 - 10304083 GAAGCACTTGCCATCTTCCTGTTACC-CGTCTGGAACTTCACGTTGTTACCCAGAAATGGGATTTTAACCTCTTAAACATTCCAGGTGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1454009 88 - 107702431 GAAGCACTTGCCATCTTCCTGTTACC-CATCTGGAACTTCATGTTGCTATCCAGAAATGGGATTTTAACCTCTTAAACATTCCAGGTGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 935344 88 - 2200435 GAAGCACTTGCCATCTTCCTGTTACC-CGTCTGGAACTTCACGTTGTTACCCAGAAATGGGATTTTAACCTCTTAAACATTCCAGGTGC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1373268 88 - 108792865 GAAGCACTTGCCGTCTTCCTGTTACC-CGTCTAGAACTTCACATTTTTACCCAGAAATGGGATCTTAACCTCTTAAACATTCCAGCTAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1219172 88 - 7082604 GAAGCACTTACCATCTTCCTGTTACC-CGTCTAGAACTTCACATTTTTACCCAGAAATGGAATCTTAACCTCTTAAACGTTCCAGGTAA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1307089 88 + 1864846 GAAGCACTTGCCATCTTCCTGTTACC-CGTCTAGAACTTCACATTTTTACCCAGAAATGGGGTCTTAACCTCTTAAACGTTCCAGGTAC i cebCap1.NW_016107827v1 I 123 C 0 s otoGar3.GL873658 933635 76 + 5252280 GAAGCACTTGC------------ACT-CACCTGGACCTTCACATTCTAACCTAGAAGGGGGATCTTAACCTATTAAACATTCCAGATAA i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1692021 88 + 4416731 AAAGCAAGTGGTTCTTTTATATTACT-CACTTAGAGACTTACATCTTAATATAGAATTGGAATCTTAAGCTATGAAACATTTCAACTAC i dasNov3.JH576208 C 0 I 404 e aotNan1.NW_018513311v1 99748 214 + 287728 I e mm10.chr12 90000918 2670 - 120129022 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=122652.000000 s hg38.chr2_KI270774v1_alt 105739 17 + 223625 TAAAACAAATAACACAG s panPan2.chr2A 1344639 17 + 114371477 TAAAACAAATAACATAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1368843 17 + 1464242 TAAAACAAATAACATAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1093249 17 + 81552678 TAAAACAAATGACATAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1423989 17 + 108979918 TAAAACAAATAACACAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1396368 17 - 111193037 TAAAACAAATAACACAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1424833 17 + 3644372 TAAAACAAATAACACAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1378332 17 - 10304083 TAAAACAAATAACACAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1454097 17 - 107702431 TAAAACAAATAACACAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 935432 17 - 2200435 TAAAACAAATAACATAG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1373356 17 - 108792865 TACAACAAGCAATATAG i calJac3.chr14 C 0 I 4 s saiBol1.JH378218 1219260 17 - 7082604 TACAACAAGTAATCCAG i saiBol1.JH378218 C 0 I 4 s cebCap1.NW_016107827v1 1307177 17 + 1864846 TACAACAAGTAACACAG i cebCap1.NW_016107827v1 C 0 I 4 s otoGar3.GL873658 933711 17 + 5252280 TAAAACAAATAAAATAA i otoGar3.GL873658 C 0 I 5 s dasNov3.JH576208 1692513 17 + 4416731 TAAAGAAAATAAAATTG i dasNov3.JH576208 I 404 C 0 e aotNan1.NW_018513311v1 99748 214 + 287728 I e mm10.chr12 90000918 2670 - 120129022 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=1955819.000000 s hg38.chr2_KI270774v1_alt 105756 298 + 223625 GAGTGCTTTCATTGGAAACTACTGGTATAGTGGAATTATTTTATCTTTTATTAAGTACAC-----AAGATAGGCAAATC---TTATCAAC----TTTACCACTGGCTCAGGTAACCAGTGATGAATGTTCAGAACAAAAGTTATTCGGAATCATTTGA-AGTGGTTTGGGCAAG---------------TGCGAAATTAAG-GTGAGTAG-------------CTCTGATCCCATCCTCCAGGCAGCTCCGTGCAGTGGGG-GTGGACGCCCCTCTGTA--GCGGGGAAGTGAAGGCCTGTGGA-GGGAAGCGACC---CCG-GGACCTGGCT-GCCTGCCTGTC--CCGG s panPan2.chr2A 1344656 299 + 114371477 GAGTGTTTTCATTGGAAACTGCTGGTATAGTGGAATTATTTTATCTTTTATTAAGTGCAC-----AAGACAGGCAAATC---TTATCAAC----TTTACCACTAGCTCAGGTAACCAGTGATGAATGTTCAGAACAAAAGTTATTCAGAATCATTTGA-AGTGGTTTGGGCAAG---------------TGCGAAATTAAG-GTGAGCAG-------------CTCTCATCCCATCCTCCAGGCAGCTCCGTGCAGTGGGG-GTGGACGCCCAGCTGTA--GCGGGGAAGTGAAGGCCTGTGGAGGGGAAGCGACC---CCG-GGACCTGGCT-GCCTGCCTGTC--CCGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1368860 299 + 1464242 GAGTG-TTTCACTGGAAACTGCTGGTATAGTGGAATTATTTTATCTTTTATTAAGTACAC-----AAGATAGGCAAATCTTATTATCAAC----TTTACCACTAGCTCAGGTAACCAGTGATGAATGTTCAGAACAAAAGTTATTCAGAATCATTTGA-AGTGGTTTGGG-AAG---------------TGCGAAATTAAG-GTGAGTAG-------------CTCTTATCCCATCCTCCAGGCAGCTCCGTGCAGTGAGG-GTGGACGCCCCTCTGTA--GCGGGGAAGTGAAGGCCTGTGGAGGGGAAGCGACG---CC--GGACCTGGCT-GCCTGCCTGCC--CTGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1093266 304 + 81552678 GAATGTTTTCATTGGAAACTGCTGGTATAGTGGAATTATTTTATCTTTTATTAAGTACAC-----AAGATAGGCAAATCTTATTATCAAC----TTTACCACTACCTCAGGTAACCAGTGATAAATGTTCAGAACAAAAGTTATTCAGAATCATTTGA-AGTGGTTTGGGCACG---------------TGAGGAATTAAG-GTGAGTAGC-----------TCTCTCATCCCATCCAGCAGGCAGCTCTGTGCGGTGGGG-GTGGACGCCCCTCTGTG--GCGGGGAAGTGAAGGCCTGTGGAGGGGAAGCGACC---CCG-GGACCTGGCT-TCCCGCCTGTC--CCGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1424006 305 + 108979918 GAGTGTTTTCATTGGAAACTGCTGGTATATTGGAATTATTTTATCTTTTATTAAGTACACAAATTAAGATAGGCAAATT--ATTACCAAC----TTTACCACTAGCTCAGGCGACCAGTGATAAATGTTCAGAACGAAAGTTATTCAAAATCATTTGA-AGTGGTTTAGACAAG---------------AGAGAAATT-AG-GTGAGCAGC-----------TCTCTCATCCCATTCTCCAGGCAGCTCCATGCAG-GGGG-ATGGACACTTCTCCATA--GCAAGGAAGTGAAGGCCCGTGGAGGAGAAGCCTCC---CGC-AGACCTGGTC-GCCTGCCTGCC--CTGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1396385 305 - 111193037 GAGTGTTTTCATTGGAAACTGCTGGTATATTGGAATTATTTTATCTTTTATTAAGTACACAAATTAAGATAGGCAAATT--ATTACCAAC----TTTACCACTAGCTCAGGCGACCAGTGATAAATGTTCAGAACGAAAGTTATTCAAAATCATTTGA-AGTGGTTTAGACAAG---------------AGAGAAATT-AG-GTGAGCAGC-----------TCTCTCATCCCATTCTCCAGGCAGCTCCATGCAG-GGGG-ATGGACACTTCTCCATA--GCAAGGAAGTGAAGGCCCGTGGAGGAGAAGCCTCC---CGC-AGACCTGGTC-GCCTGCCTGCC--CTGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1424850 305 + 3644372 GAGTGTTTTCATTGGAAACTGCTGGTATATTGGAATTATTTTATCTTTTATTAAGTACACAAATTAAGATAGGCAAATT--ATTACCAAC----TTTACCACTAGCTCAGGCGACCAGTGATAAATGTTCAGAATGAAAGTTATTCAAAATCATTTGA-AGTGGTTTAGACAAG---------------AGAGAAATT-AG-GTGAGCAGC-----------TCTCTCATCCCATTCTCCAGGCAGCTCCATGCAG-GGGG-ATGGACACTTCTCCATA--GCAAGGAAGTGAAGGCCCGTGGAGGAGAAGCCTCC---CGC-AGACCTGGTC-GCCTGCCTGCC--CTGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1378349 305 - 10304083 GAGTGTTTTCATTGGAAACTGCTGGTATATTGGAATTATTTTATCTTTTATTAAGTACACAAATTAAGATAGGCAAATT--ATTATCAAC----TTTACCACTAGCTCAGGTAACCAGTGATAAATGTTCAGAATGAAAGTTATTCAGAATCATCTGA-AGTGGTTTGGACAAG---------------TGAGAAATT-AG-GTGAGCAGC-----------TCTCTCATCCCATTCTCCAGGCAGCTCCATGCAG-GGGG-ATGGACACTCCTCCGTA--GTAAGGAAGTGAAGGCCCGTGGAGGAGAAGCCTCC---CAC-AGACCTGGTC-GCCTGCCTACC--CTGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1454114 305 - 107702431 GAGTGTTTTCATTGGAAACTGCTGGTATATTAGAATTATTTTATCTTTTATTAAGTACACAAATTAAGATAGGCAAATT--ATTATCAAC----TTTACCACTAGCTCAGGCAACCAGTGATAAATGTTCAGAACAAAAGTTATTCAGAATCATTTGA-AGTGGTTTGGACAAG---------------TGAGAAATT-AG-GTGAGCAGC-----------TCTCTCATCCCATTCTCCAGGCAGCTCCATGCAG-GGGG-ATGGACACTTCTCCGTA--GCAAGGAAGTGAAGGCCCGTGGAGGAGAAGCCTCC---CGC-GGACCTGGTC-GCCTGCCTGCC--CTGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 935449 305 - 2200435 GAGTGTTTTCATTGGAAACTGCTGGTATATTGGAATTATTTTATCTTTTATTAAGTACACAAATTAAGATAGGCAAATT--ATTATCAAC----TTTACCACTAGCTCAGGTAACCAGTGATAAATGTTCAGAACGAAAGTTATTCAGAATCATCTGA-AGTGGTTTGGACAAG---------------TGAGAAATT-AG-GTGAGCAGC-----------TCTCTCATCCCATTCTCCAGGCAGCTCCATGCAG-GGGG-ATGGACGCTCCTCCGTA--GCAAGGAAGTGAAGGCCCGTGGAGGACAAGCCTCC---CAC-AGACCTGGTC-GCCTGCCTGCC--CTGG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1373377 310 - 108792865 GAGTGTTTTCATTGGAAACTGCTGGCGTAATGGAATCATTTTATCTTTTATTAAGTACACAAATTACGATAGGCAAATCTTATTATCAAC----TTTACCACTAGTTCAGGTAACCAGTGATAAATATTCAGAGCCTAAGTTGCTCAGAATCATGTG--AGTGACTTGGGCCAG---------------TGAGAAATTAAG-GTGAGCGAC-----------TCACTCGTCCTATCCTCCAGGCAGCTCCGTGCGG-GGGGAACGGACGCCCCTCTGTA---TGGGGAATCAAAGGCCC-TAGAGGGGAAGCGACC---CCCAGGACCTGACCAGCAGCCCTCCCCACCAG i calJac3.chr14 I 4 C 0 s saiBol1.JH378218 1219281 307 - 7082604 GAGCGTCTTCACTGGAAACTGCTGGTATAATGGATTTATTTTATCTTTTATTAAGTACACAAATTAAGATAGGCAAATCTTATTATCAAC----TTTACTGCTAGTTCAGGTAACCAGTGATAAATATTCAGAACGTAAGTTATTCAGAATCATTTG--AGTGACTTGGGCAAG---------------TGAGAAATTAAG-GTGAGCGAC-----------TCACCTGTCCCATCCTCCAGGCAGCTCCGTGTGG-GGGG-ACGGACGCCCCTCTGTA---CGGGGAAGCAAAGGCCC-TAGAGGGGAAGCGACC---CCCGGGACCTGGCCAGCCCGCCTGCC--CCGG i saiBol1.JH378218 I 4 C 0 s cebCap1.NW_016107827v1 1307198 306 + 1864846 GAATGTTTTCATTGGAAACTGCTGGTATAATGGAATTATTTTATCTTTTATTAAGTACACAAA-TAAGATAGGCAAATCTTATTATCAAC----TTTACTGCTAGTTT-GGTAACCAGTGATAAATATTCAGAACATAAGTTACTCAGAATCATTTG--AGTGACTTGGGCAAG---------------TGAGAAATTAAG-GTGAGCGAC-----------TCACCTGTCCCATCCTCCAGGCAGCTCCGTGTGG-GGGGAATGGACGCCCCTCTGTA---CGGGGAAGCCAAGGCTC-TAGAGGGGAAGCGACC---CCCAGGACTTGGCCAGCCCGCCTGCC--CCGG i cebCap1.NW_016107827v1 I 4 C 0 s aotNan1.NW_018513311v1 99962 307 + 287728 GAGTGTTTTCACTGGAAAATGCTGGTATAATGGAAGCATTTTATCTTTTATTAAGTACACAAATTAAGATAGGCAAATCTTATTATCAAC----TTTACTGCTAGTTCAGGTAACCAGTGATAAATATTCAGAATATAAGTTACTCAGAATCATTTA--AGTGACTTGGGCAAG---------------TGAGAAATTAAG-GTGAGCGAC-----------TCACTCGTCCCATCCTCCAGGCAGCTCTGTGCGT-GGGGAACGGACGCCCCTCTGTA---CGGGGAAGCAAAGGCCC-TAGA-GGGAAGCGACC---CCCGGGACCTGGCCAGCCCGCCTGCC--CCGG i aotNan1.NW_018513311v1 I 214 C 0 s otoGar3.GL873658 933733 249 + 5252280 GAGTGCTTTCACTGGAAATTGCTGACATATTTGAATAATTT--GTTTATGTTAAATGCACAAATTTAAGTAGGCAAAT---ATTATGAAG----TTGATAACTAATTTAGGTG------------------------AGGTTATTTTGAATCACTAGACCATGGAATGGGGAAG---------------TGATAAATTGAGTGTAAATAA-------------CTCTCCTCCCATTC---------CATCCTGTGG-GGGG-AG------------ATA--ATGGGAAAACAGAGCTT-------AAACAATCTCC---CCA-GGACCTCAGG-ACCTAA--ACA--GTGG i otoGar3.GL873658 I 5 C 0 s dasNov3.JH576208 1692530 333 + 4416731 TGGTCTTCTCAGTGGAAAGTGCTGATATAGAAGAATAATTGCTCTTTTTAT--AATGCACAAGCTATACTAGACAAACATTACTAGAAATCTTGTTTATTAATGGTTGAAGTGAC------TAAAATATCAGAA-AAAGGTTATTGAAAATCGT---A-AGTGGTTTGGGCAAAGTGAGAGCTAAATTTTGATAAGTTAAA-CTTATCAATGTTGGGTCCTATTCctcattctgttcgacatatagttctattaggtagga-attaatattctgttttaatataggtaagctgaggctcatagtagttaaataatctagcca-agaccccatggACCCAATTGGC--CCAG i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90000918 2670 - 120129022 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=564453.000000 s hg38.chr2_KI270774v1_alt 106054 94 + 223625 AAGCCACGTGGGCATCACCGCAGCAAGATGGGCTTGAGGAACAAAGC--AACACTGTCAGTGAATCGCTGAACTGTCATTGCACT------------------------------------------------------------------------TTGACTGTGTG s panPan2.chr2A 1344955 94 + 114371477 AAGCCACGTGGGCATCACCACAGCAAGATGGGCTTGAGGGACAAAGC--AACACTGTCAATGAATCGCTGAACTGTCATTGCGCT------------------------------------------------------------------------TTGACTGTGTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1369159 94 + 1464242 AAGCCACGTGGGCATCACCTCAGCAAGATGGGCTTGAGGGACAAAGC--AACACTGTCAGTGAATCGCTGAACTGTCATTGCGCT------------------------------------------------------------------------TTGACTGTGAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1093570 94 + 81552678 AAGCCACGTGGGCATCACCACAGCTAGATGGGCTTGAAGGACAAAGC--AACACTGCCAGTGAATCGCCGAACTGTCATTGCGCT------------------------------------------------------------------------TTGACTGTGTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1424311 143 + 108979918 AAACCACATGGGCATCACCACAGCCAGATGGGCTTGAGCGACAAAGC--AACACCGTCAGTGAATCCCCGAACCGTCACTGTGCT-----------------------CTGACTGTGTGGTGTTCCTGTCAGTGAATCCCCGAACCATCACTGTGCTCTGACTGTGTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1396690 143 - 111193037 AAACCACGTGGGCATCACCACAGCCAGATGGGCTTGAGCGACAAAGC--AACACCGTCAGTGAATCCCCGAACCGTCACTGTGCTCTGACTGTGTGGTGTTCCTGTCAGTGAATCC-----------------------CCGAACCATCACTGTGCTCTGACTGTGTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1425155 143 + 3644372 AAACCACGTGGGCATCACCACAGCCAGATGGGCTTGAGCGACAAAGC--AACACCGTCAGTGAATCCCCGAACCGTCACTGTGCT-----------------------CTGACTGTGTGGTGTTCCTGTCAGTGAATCCCCGAACCATCACTGTGCTCTGACTGTGTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1378654 94 - 10304083 AAACCACGTGGGCATCACCACAGCCAGATGGGCTTGAGCGACAAAGC--AACACCGTCAGTGAATCCCCGAACCGTCACTGTGCT------------------------------------------------------------------------CTGACTGTGTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1454419 94 - 107702431 AAACCACGTGGGCATCACCACAGCCAGATGGGCTTGAGTGACAAAGC--AACACTGTCAGTGAATCCCCGAACCGTCATTGTGCT------------------------------------------------------------------------CTGACTATGTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 935754 94 - 2200435 AAACCACATGGGCATCACCACAGCCAGATGGGCTTGAGCGACAAAGC--AACACCATCAGTGAATCCCCAAACCGTCACTGTGCT------------------------------------------------------------------------CTGACTGTGTG i manLeu1.NW_012103754v1 C 0 I 99 s calJac3.chr14 1373687 94 - 108792865 AAGCTGTGTGGACATCACCATGGCAGCATGGGCTTGAGGGACAAAGC--AACACTGTCAGGGGATTGCCGAGCTGTCACTGCGCT------------------------------------------------------------------------CTGACTGCGTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1219588 94 - 7082604 AAGCTGTGTGGACATCGCCATGGCAGCGTGGGCTCGAGGGACAAAGC--AGCAGTGTCAGGAGATCGCGGAACTGTCACTGCGCT------------------------------------------------------------------------GTGACCGTGTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1307504 93 + 1864846 AAGCTGTGTGGACAACACCatggcagcgtgggcttgaggggcaaagc--agcagtgtcagg-gattgccaaactgtcattgcgct------------------------------------------------------------------------gtgattgtgta i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 100269 94 + 287728 AAGCTGTGTGGGCCTCACCACAGCGGCACGGGCTTGAGGGGCAAAGC--GACAGCGTCAGGGAATTGCCGAACCGTCACTGCGCT------------------------------------------------------------------------TTGATTGTGTG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 933982 92 + 5252280 ACTTCCTGTGGTTCCCATCACCTCACACTGAATATGGTAGAACAGAT--AAGGCAGACAGGGAA-CAGTGAACCTTACCTGTGCT-------------------------------------------------------------------------TGACTGTGTG i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90003588 89 - 120129022 AGACCACATGACTTTCACTGCACCCATCTGCCCTTGAGGAAGAAAGCT-AAAGCTGGCAG--AGTTGCTGCACTG----GGGGGT------------------------------------------------------------------------CTGTTTTTATG i mm10.chr12 I 2670 I 5 s dasNov3.JH576208 1692863 92 + 4416731 AAGCCATGCTGTTGTCTCTAGATGAAGCAGGGCTTGCTGAATTATGCTAAAAATGAACAGAGACTGACTGAACT----TTGCATT------------------------------------------------------------------------TTGATTGTGTG i dasNov3.JH576208 C 0 C 0 e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=-1332.000000 s hg38.chr2_KI270774v1_alt 106148 3 + 223625 -ACA s panPan2.chr2A 1345049 3 + 114371477 -ATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1369253 3 + 1464242 -ATA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1093664 3 + 81552678 -ATA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1424454 3 + 108979918 -GTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1396833 3 - 111193037 -GTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1425298 3 + 3644372 -GTA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1378748 3 - 10304083 -GTA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1454513 3 - 107702431 -GTG i chlSab2.chr14 C 0 C 0 s calJac3.chr14 1373781 3 - 108792865 -ATA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1219682 2 - 7082604 -AC- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1307597 3 + 1864846 -atc i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 100363 3 + 287728 -ACA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 934074 3 + 5252280 -ATA i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90003682 3 - 120129022 -GTG i mm10.chr12 I 5 C 0 s dasNov3.JH576208 1692955 3 + 4416731 AAT- i dasNov3.JH576208 C 0 C 0 e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e manLeu1.NW_012103754v1 935848 99 - 2200435 I e panTro5.chr2A 110126965 80344 - 111504155 T a score=913440.000000 s hg38.chr2_KI270774v1_alt 106151 103 + 223625 TTCTGTTCCGTAGGAAAGCCTGAGGAGTCTCGTGTCTCTAGCGTCTTGGAGGAAAGCAAGCGCCTGGTGGACACCGCCATGTACGCCACGATGCAGAGGTGAG s panPan2.chr2A 1345052 103 + 114371477 TTCTGTTCCGTAGGAAAGCCTGAGGAGTCTCGTGTCTCTAGCGTCTTGGAGGAAAGCAAGCGCCTGGTGGACACCGCCATGTACGCCACGATGCAGAGGTGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1369256 103 + 1464242 TTCTGTTCCGTAGGAAAGCCTGAGGAGTCTCGTGTCTCTAGCGTCTTGGAGGAAAGCAAGCGCCTGGTGGACACCGCCATGTACGCCACGATGCAGAGGTGAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1093667 103 + 81552678 CTCTGTTCCGTAGGAAAGCCTGAGGAGTCTCCTGTCGCCAGCATCTTGGAAGAAAGCAAGCGCCTGGTAGACACCGCCATGTACGCCACGATGCAGAGGTGAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1424457 103 + 108979918 TTCTCTTCTGTAGGAAAGCCTGAGGAGTCTCGTGTCGCCGGCGTCTTGGAGGAAAGCAAGCGGCTGGTGGACACTGCCATGTACGCCACGATGCAGAGGTGAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1396836 103 - 111193037 TTCTCTTCTGTAGGAAAGCCTGAGGAGTCTCGTGTCGCCGGCGTCTTGGAGGAAAGCAAGCGGCTGGTGGACACTGCCATGTACGCCACGATGCAGAGGTGAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1425301 103 + 3644372 TTCTCTTCTGTAGGAAAGCCTGAGGAGTCTCGTGTCGCCGGCGTCTTGGAGGAAAGCAAGCGGCTGGTGGACACTGCCATGTACGCCACGATGCAGAGGTGAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1378751 103 - 10304083 TTCTCTTCTGTAGGAAAGCCTGAGGAGTCTCGTGTCGCCGGCGTCTTGGAGGAAAGCAAGCGGCTGGTGGACACTGCCATGTACGCCACGATGCAGAGGTGAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1454516 103 - 107702431 TTCTCTTCTGTAGGAAAGCCTGAGGAGTCTCGTGTCGCCAGCGTCTTGGAGGAAAGCAAGCGGCTGGTGGACACTGCCATGTACGCCACGATGCAGAGGTGAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 935947 103 - 2200435 TTCTCTTCTGTAGGAAAGCCTGAGGAGTCTCGTGTCGCCGGCGTCTTGGAGGAAAGCAAGCGGCTGGTGGACACTGCCATGTACGCCACGATGCAGAGGTGAG i manLeu1.NW_012103754v1 I 99 C 0 s calJac3.chr14 1373784 102 - 108792865 CTCTGTTTC-TAGGAAAGCCTGCAGAGTCTCACATTGCCAGCATCCTGGAGGAAAGCAAGTGCCTGGTAGACACCGCCATGTACGCCACGATGCAGAGGTGAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1219684 102 - 7082604 CTCTGTTTC-TAGGAAAGCCTGCGGAGTCTCGCATTGCCAGCGTCCTGGAGGAAAGCAGGTGCCTGGTAGACACGGCCATGTACACCACCATGCAGAGGTGAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1307600 102 + 1864846 ctctgtttC-TAGGAAAGCCTGCGGAGTCTCGCATTGCCAGCATCCTGGAGGAAAGCAAGTGCCTGGTGGACACCGCCATGTATACCACCATGCAGAGGTGAG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 100366 102 + 287728 CTCTGTTTA-TAGGAAAGCCTGCGGAGTCTCGCATTGCCAGCATCCTGGAGGAAAGCAAGTGCCTGGTAGACACCGCCATGTACACCACGATGCAGAGGTGAG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 934077 102 + 5252280 -TTCATTCCACAGGGGAGACTGAGGAATCATATGTCATCAGTGTTGTGGAGAAGAGCCGGGTCCTGGTGGACAGCACCATCTGCCACAATATGGAAAGGTGAG i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90003685 103 - 120129022 TTTTATATCCTAGGGAAGACCATGAAGTCCCATGTTATCAGTGCTGTGGAAACGAGCCAGCTCATGGTGGACCATGCAGTCTACAACACCATGAAAAGGTGAG i mm10.chr12 C 0 I 579 s dasNov3.JH576208 1692958 103 + 4416731 TTTTATTTCATAGGGAAAACTGAAAAACCAAATGTTATCAGCATTTTAGAAGAGAGTAAACACATGGTGGATAATGCTATCTACAATACAATGGAAAGGTAAG i dasNov3.JH576208 C 0 C 0 e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=150216.000000 s hg38.chr2_KI270774v1_alt 106254 28 + 223625 CCTTGC----------------------GGAGGGGCCGCCGCCCCAAATG s panPan2.chr2A 1345155 28 + 114371477 CCTTGC----------------------GGAGGGGCCGCCGCCCCGAATG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1369359 27 + 1464242 CCTTGC----------------------GGA-GGGCCGCCGCCCCGAATG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1093770 28 + 81552678 CCCTGC----------------------GGAGGGGCCGCCGCCCCGAGCG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1424560 28 + 108979918 CCCTGG----------------------GGAGGGGCCACCGCCCCGAATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1396939 28 - 111193037 TCCTGG----------------------GGAGGGGCCACCGCCCCGAATG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1425404 28 + 3644372 CCCTGG----------------------GGAGGGGCCACCGCCCCGCATG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1378854 28 - 10304083 CCCTGG----------------------GGAGGGGCCACCGCCCCGAATG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1454619 28 - 107702431 CCCTGG----------------------GGAGGGGCCACCGCCCCGAATG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 936050 28 - 2200435 CCCTGG----------------------GGAGGGGCCACCGCCCCGAATG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1373886 28 - 108792865 CCCTGC----------------------GGAGGGGCCGCCGCCCCCAGTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1219786 22 - 7082604 CCCTGC----------------------------GCCGCCGCCCCCAATG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1307702 28 + 1864846 CCCTGT----------------------AGAGGGGCCTCCGCCCCCAATG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 100468 26 + 287728 CCCTGC----------------------GGAGGGGCCGC--CCCCCAATG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 934179 23 + 5252280 AT---------------------------GGGAGAGTGCCACCTGAGATG i otoGar3.GL873658 C 0 I 1873 s dasNov3.JH576208 1693061 50 + 4416731 TCCTACTAAATAGGGATAAAGGAAAGAAGGCAAGGAAATTGCAATGAATT i dasNov3.JH576208 C 0 I 5 e mm10.chr12 90003788 579 - 120129022 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=1200406.000000 s hg38.chr2_KI270774v1_alt 106282 176 + 223625 CCACCGACAGGCGCATCCTCCCTGACA---TCCACACAC-----------------------------------GTGTGGCCTGATTTTCGCAAttgcagatgaaaacctgaagcttgccattgttaatttacttccccagtgtcatgtgcaagcagcagacagaactGGTATTT-AATCTCCAATCCTTTCTTAAGCAAGACACAAAGGAAGAG s panPan2.chr2A 1345183 176 + 114371477 CCACCTACAGGCGCATCCTCCCTGACA---TCCACACAC-----------------------------------GTGTGGCCTAATTTTCGCAAttgcagatgaaaacctgaagcttgccattgttaatttacttccccagtgtcatgtgcaagcagcagacagaactGGTATTT-AATCTCCAATCCTTTCTTAAGCAAGACACAAAGGAAGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1369386 176 + 1464242 CCACCTACAGGCGCATCCTCCCTGACA---TCCACACAC-----------------------------------GTGTGGCCTGATTTTCACAATTGCAGATGAAAACCTGAAGCTTGCCATTGTTAATTTACTTCCCCAGTGTCATGTGCAAGCAGCAGACAGAACTGGTATTT-AATCTCGAATTCTTTCTTAAGCAAGACACAAAGGAAGAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1093798 172 + 81552678 CCACCTACAGGCGCATCCGCCCTGACA---TCTGCACAC-----------------------------------GTGTGGCC----TTTCACAATTGCAGATGAAAACCTGAAGCTTGTCACTGTTAATTTACTTCCCCAGTGTCATGTGCAAGCAGCAGACAGCACTGGTATTT-AATCTCCAATTCTTTCTTTAGCAAGACACAAAGGAAGAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1424588 176 + 108979918 CCACCTACGGGCACGTCCTCCCCGACA---TCCGCACAC-----------------------------------GTGTGGCCTAATATTCACAATTGCAAATGAAACCCTGAAGCTTCCCATTGTTAATTTACTTCCCCAGTGTCATGTGCAAGCAGAGGATAGAAATGGTATTT-AATATCCAATTCTTTCTTTAGCAAGACACAGAGGAAAAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1396967 176 - 111193037 CCACCTACGGGCACGTCCTCCCCGACA---TCCGCACAC-----------------------------------GTGTGGCCTAATATTCACAATTGCAAATGAAACCCTGAAGCTTCCCATTGTTAATTTACTTCCCCAGTGTCATGTGCAAGCAGAGGATAGAAATGGTATTT-AATATCCAATTCTTTCTTTAGCAAGACACAGAGGAAAAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1425432 176 + 3644372 CCACCTACGGGCACGTCCTCCCCGACA---TCCGCACAC-----------------------------------GTGTGGCCTAATATTCACAATTGCAAATGAAACCCTGAAGCTTCCCATTGTTAATTTACTTCCCCAGTGTCATGTGCAAGCAGAGGATAGAAATGGTATTT-AATATCCAATTCTTTCTTTAGCAAGACACAGAGGAAAAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1378882 176 - 10304083 CCACCTACGGGCACGTCCTTCCTGACA---TCTGCACAC-----------------------------------GTGTGGCCTAATATTCACAATTGCAAATGAAAACCTGAAGCTTCCCATTGTTAATTTGCTTCCCCAGTGTCATGTGCAAGCAGAGGATAGAAATGGTATTT-AATATCCAATTCTTTCTTTAGCAAGACACAGAGGAAAAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1454647 176 - 107702431 CCACCTACGGGCACGTCCTCCCCGACA---TCTGCACAC-----------------------------------GTGTGGCCTAATATTCACAATTGCAAATGAAAACCTGAAGCTTCCCATTGTTAATTTGCTTCCCCAGTGTCATGTGCAAGCAGAGGATAGAAATGGTATTT-AATATCCAATTCTTTCTTTAGCAAGACACAGAGGAAAAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 936078 176 - 2200435 CCACCTACAGGCACATCCTTCCCGACA---TCTGCACAC-----------------------------------GTGTGGCCTAATATTCACAATTGCAAATGAAAACCTAAAGCTTCCCATTGTTAATTTGCTTCCCCAGTGTCATGTGCAAGCAGAGGATAGAAATGGTATTT-AATATCCAATTCTTTCTTTAGCAAGACACAGAGGAAAAG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1373914 175 - 108792865 CTGCCTACAGGCGCATCC-CACCGACA---TCCGCACAC-----------------------------------ACGTGGCCTGATTTTCACAACTGCAAATGAAAACCTGAAGTTTGCCAGGGCTAATTTACTTTCTCAGTGTCCCGTGTAAGCAGCAGACAGCACCAGTATTT-AATCTCCAATTTGTTCTTTAGCAAGACAGAGAGGAATAG i calJac3.chr14 C 0 I 1 s saiBol1.JH378218 1219808 174 - 7082604 CCACCCA-AGGCGCGTCC-CCCCGGCA---TCCGCACAC-----------------------------------ACGTGGCCCGATTTTCACAAttgcaaatgaaaacctgaagcttgccagggctaattgactttcccagtgtcccatgtaagcagcggacagaaccggtattt-aatctccaattcgttctTTAGCAAGACAGAGGAACAGAC i saiBol1.JH378218 C 0 I 5 s cebCap1.NW_016107827v1 1307730 175 + 1864846 CCACCTACAGGCACATCC-CCCCGACA---TCAGCACAT-----------------------------------GCGTGGCCTGATTTTCACAATTGCAAATGAAAACCTGAAGCTTGCCAGGGCTAATTTACTTTCCCAGTGCCCCATGTAAGCAGCGGACAGAACTGGTATTT-AATCTCCTATTCGTTCTTTAGCAAGACAGAGAGGAAGAG i cebCap1.NW_016107827v1 C 0 I 72 s aotNan1.NW_018513311v1 100494 174 + 287728 CCACCTACGGGCGCGTCC-CCCCGACA---TCTGCACAG-----------------------------------GCGTGGCCTGATTTTCACAATTGCAAATGGAAACCTGAAGCTTGCCAGGGCTCATTTACTTCCCCGGTGTCCCACGTAAGCAGCCGCCAGAACTGGTATTT-AATCTCCAA-TCGTTCTTTAGCAAGGCAGAGAGGAAGAG i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1693116 210 + 4416731 CCactgcatgccaaatcttctgtgagaatttttgcatacattgcctctttcattctttgcaaattatctccaaagttggtcctagttctctattttacaatttaggaaattaaactcacccaagttaatttacttgtccagt-----atactagccacagacagaatgaatatttaaatcctgtagtctttctTTAGCAAAATATAAAGCAAAAG i dasNov3.JH576208 I 5 C 0 e mm10.chr12 90003788 579 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=169039.000000 s hg38.chr2_KI270774v1_alt 106458 30 + 223625 CACCCTGATGCAATTAGCAATTACGTATAC s panPan2.chr2A 1345359 30 + 114371477 CACCCTGATGCAATTAGCAATTACGTATAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1369562 30 + 1464242 CACCCTGATGCAATTAGCAATTACGTATAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1093970 30 + 81552678 CACCGTGATCCAATCAGCAATTACATATAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1424764 30 + 108979918 CACCATGATCCAGTCAGCAATTACATATAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1397143 30 - 111193037 CACCATGATCCAGTCAGCAATTACATATAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1425608 30 + 3644372 CACCATGATCCAGTCAGCAATTACATATAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1379058 30 - 10304083 CACCATGATCCAGTCAGCAATTACATATAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1454823 30 - 107702431 CACCATGATCCAGTCAGCAATTACATATAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 936254 30 - 2200435 CACCATGATCCAGTCAGCAATTACATATAT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1374090 29 - 108792865 -ACCGTGATCCAGTCAACACCTACAGATAC i calJac3.chr14 I 1 I 42 s saiBol1.JH378218 1219987 30 - 7082604 GACCGTGACCCAATCAACACTTACAGATAG i saiBol1.JH378218 I 5 I 42 s aotNan1.NW_018513311v1 100668 30 + 287728 CACCGTGATCCAGCCAACACCTGCAGACAC i aotNan1.NW_018513311v1 C 0 I 43 s dasNov3.JH576208 1693326 29 + 4416731 CACAATGATACAACCAATAATTA-ATAAAT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90003788 579 - 120129022 I e cebCap1.NW_016107827v1 1307905 72 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=1237044.000000 s hg38.chr2_KI270774v1_alt 106488 192 + 223625 CCTGG----TTAAAAGACAGTAGAGGCTGACGTCCTGATAGCAAAACCAGCCTCTCTTCTCCAGGATTAGGACAGATTAAGGAGGAAAAGAGAGACCTAGATCCCAGATCTTTGGTG--------TTGTGATATAACTGTAACATTACCTGTGGCATAGAATAAAGAATTAAATGGGGCTCTCCCCCATTTTTGAAATAATTAG s panPan2.chr2A 1345389 192 + 114371477 CCTGG----TTAAAAGACAGTAGAGGCTGACGTCCTGATAGCAAAACCAGCCTCTCTTCTCCAGGATTAGGACAGATTAAGGAGGAAAAGAGAGACCTAGATCCCAGATCTTTGGTG--------TTGTGATATAACTGTAACATTACCTGTGGCATAGAATAAAGAATTAAATGGGGCTCTCCCCCATTTTTGAAATAATTAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1369592 192 + 1464242 CCTGG----TTAAAAGACAGTAGAGGCTGACGTCCTGATAGCAAAACCAGCCTCTCTTCTCCAGGATTAGGACAGATTAAAGAGGAAAAGAGAGACCTAGATCCCAGATCTTTGGTG--------TTGTGATATAACTGTAACATTACCTGTGGCATAGAATAAAGAATTAAATGGGGCTCTCCCCCATTTTTGAAATAATTAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1094000 192 + 81552678 CCTGG----TTAAAAGACAGTAGAGGCTGACGTCCTGATAGCAAAACCAGCCTCTCTCCTCAAGGATTAGGACAGATTAAGGAGGAAAAGAGAGACCTAGATCCCAGATCTGTGGTG--------TTGTGATGTAACTGTAACATTACCTGTGCCATAGAATAAAGAATTAAATGGGGCTCTCCTCCATTTTTGAAATAATTAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1424794 192 + 108979918 CCTGG----TTAAAAGACAGTAGAGGCTGACGTCCTGATAGTGAAACCAGACTCTCTCCTCAAGGACTAGGACAGATTAAAGAGGAAAAGGGAGACCTAGATCCCAGATCTTTGGTG--------GTGTGATGTAACTGTAACATAACCTGGGGCATAGGATAAAGAATTAAATGGGGCTCTCCTCCATTTTTGAAATAATTAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1397173 192 - 111193037 CCTGG----TTAAAAGACAGTAGAGGCTGACGTCCTGATAGTGAAACCAGACTCTCTCCTCAAGGACTAGGACAGATTAAAGAGGAAAAGGGAGACCTAGATCCCAGATCTTTGGTG--------GTGTGATGTAACTGTAACATAACCTGGGGCATAGGATAAAGAATTAAATGGGGCTCTCCTCCATTTTTGAAATAATTAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1425638 192 + 3644372 CCTGG----TTAAAAGACAGTAGAGGCTGACGTCCTGATAGTGAAACCAGACTCTCTCCTCAAGGACTAGGACAGATTAAAGAGGAAAAGGGAGACCTAGATCCCAGATCTTTGGTG--------GTGTGATGTAACTGTAACATAACCTGGGGCATAGGATAAAGAATTAAATGGGGCTCTTCTCCATTTTTGAAATAATTAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1379088 192 - 10304083 CCTGG----TTAAAAGACAGTAGAGGCTGATGTCCTGATAGTGAAACCAGACTCTCTCCTCAAGGACTAGGACAGATTAAAGAGGAAAAGGGAGACCTAGATCCCAGATGTTTGGTG--------GTGTGATGTAACTGTAACATAACCTGGGGCATAGGATAAAGAATTAAATGGGGCTCTCCTCCATTTTTGAAATAATTAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1454853 192 - 107702431 CCTGG----TTAAAAGACAGTAGAGGCTGACGTCCTGATAGTGAAACCAGACTCTCTCCTCAAGGACTAGGACAGATTAAAGAGGAAAAGGGAGACCTAGATCCCAGCTCTTTGGTG--------GTGTGATATAACTGTAACATAACCTGGAGCATAGGATAAAGAATTAAATGGGGCTCTCCTTCATTTTTGAAATAATTAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 936284 192 - 2200435 CCTGG----TTAAAAGACAGTAGAGGCTGATGTCCTGATAGTGAAACCAGACTCTCTCCTCAAGGACTAGGACAGATTAAAGAGGAAAAGGGAGACCTAGATCCCAGATGTTTGGTG--------GTGTGATGTAACTGTAACATAACCTGGGGCATAGGATAAAGAATTAAATGGGGCTCTCCTCCATTTTTGAAATAATTAG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1374161 184 - 108792865 CCTCGACTGTCAAAAGACAGTAGAGGC-----TCCTGAGAGCAAAACGGGCCTCTCTCCTCAAGGATGAGGACAGATTAAGGA-CAAAAGAGAGACCTAGGT-CCAGGTCTTTG-------------ATGATGTAACTGTAGCATTACCCAAGGCACATAATAAATAACTAAACGGAGGTCGCTTCCATTTTTTAGATACTTAG i calJac3.chr14 I 42 C 0 s saiBol1.JH378218 1220059 184 - 7082604 GCTGGATTGGCAAAAGACAATAGGGGC-----TCCTGATAATGAAACGGGCCTCTCTCCTCAAGGATTAGGACAGATTAAAGA-CAAAAGAGAGACCTAGAT-CCAGATCTTTG-------------GTGAAGTAACTGTAGCATTACCCGAGGCATATAATAAATAATGAAATGGAGCTCGCTTCCATTTTTTAGATACTTAG i saiBol1.JH378218 I 42 C 0 s cebCap1.NW_016107827v1 1307977 184 + 1864846 CCTGGATTCTCAAAACACAGTAGAGGC-----ACCTGATAGCGAAAGGGGCCTCTCTCCTCAAGGATCAGGACAGATTAAGGA-CAAAAGAGAGACCTAGAT-CCAGGTCTTTG-------------GTGATGTCGCTGTAACATTACCCGCGGCATATAATAAATAATTAAATGGAGCTGGCTTCCATTTTTTAGATACTTAG i cebCap1.NW_016107827v1 I 72 C 0 s aotNan1.NW_018513311v1 100741 184 + 287728 CCTGGATCGTCAAAGGACGATAGAGGC-----TCCTGATAGCAAAACGGGCCTCTCTCCTCAAGGATTAGGACAGATTAGGGA-CAAAAGCGAGACCTAGAT-CCGGATCTTTG-------------GTGATGTGACTGTGACATTACCCGAGGCACATAATAGATAATTAAATGGGGCGCGCCTCCATTCTTTAGGTACTTAG i aotNan1.NW_018513311v1 I 43 C 0 s dasNov3.JH576208 1693355 172 + 4416731 TCTGG---TTTAAACGATGATATATATTAAAGTTCTGTTAGGAAAATGGACCTCTCCTC------------AAAGATTGTGGAGAAAAGAAGAGATTGAGAAACTAGGTCTTAACTGTCTGATCATTGTGATATAATTTTAGCATTACCT----------------AGTTAGTTCTGCCTATCATTC-TTTTTTAAATAATTAA i dasNov3.JH576208 C 0 I 9 e mm10.chr12 90003788 579 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=115124.000000 s hg38.chr2_KI270774v1_alt 106680 13 + 223625 CATTTGTAATTAT s panPan2.chr2A 1345581 13 + 114371477 CATTTGTAATTAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1369784 13 + 1464242 CATTTGTAATTAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1094192 13 + 81552678 CATTTGTAATTAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1424986 13 + 108979918 CATTTGTAATTAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1397365 13 - 111193037 CATTTGTAATTAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1425830 13 + 3644372 CATTTGTAATTAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1379280 13 - 10304083 CATTTGTAATTAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1455045 13 - 107702431 CATTTGTAATTAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 936476 13 - 2200435 CATTTGTAATTAT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1374345 13 - 108792865 CATTTGTAGGTAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1220243 13 - 7082604 CATTTGTAATTAT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1308161 13 + 1864846 CACTTGTAATTAC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 100925 13 + 287728 CATTTGCGATTAT i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90004367 13 - 120129022 CACTTTTAAATAT i mm10.chr12 I 579 C 0 s dasNov3.JH576208 1693536 13 + 4416731 TATTTTTAAACAT i dasNov3.JH576208 I 9 I 420 e otoGar3.GL873658 934202 1873 + 5252280 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=1598047.000000 s hg38.chr2_KI270774v1_alt 106693 206 + 223625 ATAACAGACACCACTATTAAGAATATTGTGG--TCTCATATTACCTGTCTAGaaaaagaaaagaaa---aacaaaaaacaaaaaaCCTGTAAAGCAGTTT--GCCCTCCCAAGCTTATTATTTTGTAGGAAGTTGACTAATAATTATATAAGTTCTTGAGATACAAAATATCAAAAGACAGCAGTTAATTTATTCCAAATTTCTATTATTCCA s panPan2.chr2A 1345594 206 + 114371477 ATAACAGACACCACTATTAAGAATATTGTGG--TCTCATATTACCTGTCTAGaaaaagaaaagaaa---aacaaaaaacaaaaaaCCTGTAAAGTAGTTT--GCCCTCCCAAGCTTATTATTTTGTAGGAAGTTGACTAATAATTATATAAGTTCTCGACATACAAAATATCAAAAGACAGCAGTTAATTTATTCCAAATTTCTATTATTCCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1369797 205 + 1464242 ATAACAGACACCACTATTAAGAATATTGTGG--TCTCATATTACCTGTCTAGaaaaagaaaagaaa---aacaaaaaa-aaaaaaCCTGTAAAGCAGTTT--GTCCTCCCAAGCTTATTATTTTGTAGGAAGTTGACTAATAATTATATAAGTTCTCGAGATACAAAATATCAAAAGACAGCAGTTAATTTATTCCAAATTTCTATTATTCCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1094205 206 + 81552678 GTAACAGACACCACTATTAAGAATATTGTGA--TCTCATATTACCTATCTAGTaaaagaaaagtaa---aacaaaaaacaaaaaaCCTGTAAAGCAGTTT--GTCCTCCCAAGCTTATTATTTTGTAGGAAGTTGACTAATAAGTATATAAGTTCTCGAGATACAAAATATCAAAAGATAGCAGTTAATTTATTCCAAATTTCTATTATTCCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1424999 196 + 108979918 ATAACAGACACCACTATTAAGAATATTGTGG--TCTCATATTACCTGTCTAGATAAAGAAAAGTAA---AAC----------AAACCTGTAAAGCAGTTT--GTCCTCCCAAGCTTATTATTTTGTAGGAAGTTGACTAATAATTATATAAGTTCTCAAGATACAAAATATCAAAAGACAGCAGTTAATTTATTCCAAATTTCTATTATTCCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1397378 196 - 111193037 ATAACAGACACCACTATTAAGAATATTGTGG--TCTCATATTACCTGTCTAGAAAAAGAAAAGTAA---AAC----------AAACCTGTAAAGCAGTTT--GTCCTCCCAAGCTTATTATTTTGTAGGAAGTTGACTAATAATTATATAAGTTCTCAAGATACAAAATATCAAAAGACAGCAGTTAATTTATTCCAAATTTCTATTATTCCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1425843 196 + 3644372 ATAACAGACACCACTATTAAGAATATTGTGG--CCTCATATTACCTGTCTAGAAAAAGAAAAGTAA---AAC----------AAACCTGTAAAGCAGTTT--GTCCTCCCAAGCTTATTATTTTGTAGGAAGTTGACTAATAATTATGTAAGTTCTCAAGATACAAAATATCAAAAGACAGCAGTTAATTTATTCCAAATTTCTATTATTCCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1379293 199 - 10304083 GTAACAGACACCACTGTTAAGAATATTGTGG--TCTCATATTACCTGTCTAGAAAAAGAAAAGAGA---AAC-------AAAAAACCTGTAAAGCAGTTT--GTCCTCCCAAGCTTATTATTTTGTAGGAAGTTGACTAATAATTATATAAGTTCTCAAGATACAAAATATCAAAAGACAGCAGTTAATTTATTCCAAATTTCTATCATTCCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1455058 199 - 107702431 ATAACAGACACCACTATTAAGAATATTGTGG--TCTCATATTACCTGTCTAGAAAAAGAAAAGAAAATCAAA----------AAACCTGTAAAGCAGTTT--GTCCTCCCAAGCTTATTATTTTGTAGGAAGTTGACTAATAATTATATAAGTTCTCAAGATACAAAATATCAAAAGACAGCAGTTAATTTATTCCAAATTTCTATTATTCCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 936489 196 - 2200435 ATAACAGACACCACTATTAAGAATATTGTGG--TCTCATATTACCTGTCTAGAAAAAGAAAAGTAA---AAC----------AAACCTGTAAAGCAGTTT--GTCCTCCCAAGCTTATTATTTTGTAGGAAGTTGACTAATAATTATATAAGTTCTCAAGATACAAAATATCAAAAGACAGCAGTTAATTTATTCCAAATTTCTATTATTCCA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1374358 199 - 108792865 AGAGCAGACACCAGTGTTAAGGATACTGTGG--TCTCATATTACCCATTTAGAAAAAGAAAAGAAA---AAC-------AGAAAACCTGTGAAGCAGTTT--GTCCTTCCAAGCTTATTATTTTGTAGAAAGTTGACTCATTATTAAATAAGCCCTTGAGACACAAAGTATCAAAAGACAGCAGTTAATGTATTCCAAATTGCTATTATTTCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1220256 197 - 7082604 ATAACAGACACCACTATTAAGGATACTGTGG--TTTC--ATCACCCACTTAGAAAAAGAAAAGAAA---AAC-------AGAAAACCTGGGAAGCAGTTT--GTCCTTCCACACTTACTATTTTGTAGCAAGTTGACTCATAATTATATAAGCTCTTGAGATACAAAGTATCAAAAGACAGCAGTTAATGTATTCCAAATTTCTATTATTTCA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1308174 199 + 1864846 ATAACAGCCGCCACTATTAAGGATACTGTGG--TCTCATATTACCCATTCAGAAAAAGAAAAGAAA---AAC-------AGAAAACCTGTGAAGCAGTTT--GTCCTTCCACGCTTATTATTTTGTAGAAAGTTGACTCATAATTATATAAGCTCTTGAGATACAAAGTATCAAAAGACAGCAGTTAATGTATTCCAAGGTTCTATTATTTCA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 100938 199 + 287728 GTAACAGACACCACTATTAAGGATACTGTGG--TCTCATGTTACCCATTTAGAAAAAGAAAAGAAA---AGC-------AGAAAACCTGTGAAGCAGTTT--GTCCTTCCACGCTTATTATTTTGTAGAAAGTTGACTCATAATTATAGAAGCTCTTGAGATACAAAGTATCAAAAGACAGCAGTTAATGTATTCCAAATTTCTATTATTTCA i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90004380 185 - 120129022 GTGACAGACACCATTGCTCATGGCATCATGG--TGTCTCATTCGCTGTCCAGAAA---GCATCAAA---AAC----------ATACTAG-------GTTTACATCTTCACAAACT---TATTTTATTGGAAATTGGTGAAAAGTTACAGCCTCTCTCAAGGTACAAATTATTACCTGACATCTTCTGATTTACTTCAAATTTCTATTATTCCA i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1693969 179 + 4416731 ATAACGGACACCAATATTAAGGATATTGTGGGTCCTTATGTTAGCTGTTTA-------AAAAGCAA---AAC---------AAAAACAGAGAAGCAAGTC--------------TTATT-TTTTATTGTAAGTTACATAATAACTATATAATCTCTCAAGATACAAAATAGTACAATGCAGAGGTTTTTTCATTCCCAATTTTTCTTATTCCA i dasNov3.JH576208 I 420 C 0 e otoGar3.GL873658 934202 1873 + 5252280 I e colAng1.NW_012118821v1 1371149 5150 - 13651311 M e panTro5.chr2A 110126965 80344 - 111504155 T a score=833317.000000 s hg38.chr2_KI270774v1_alt 106899 96 + 223625 -GCCAG--AAAAATACCTTACTGTTC-ATACTGGCTGCAAACAAATTATTATTTATTTTCT----AAAAATTGAATCAAAGGGAAAAGAAAGAGAAACACTATT s panPan2.chr2A 1345800 96 + 114371477 -GCCAG--AAAAATACCTTACTGTTC-ATATTGGCTGCAAACAAATTATTATTTATTTTCT----AAAAATTGAATCAAAGGGAAAAGAAAGAGAAACACTATT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1370002 96 + 1464242 -GCCAG--AAAAATACCTTACTGTTC-ATACTGGCTGCAAACAAATTATTATTTATTTTCT----AAAAATTGAATCAAAGGGAAAAGAAAGAGAAACACTATT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1094411 96 + 81552678 -GCCAG--AAAAATACCTTATTGTTC-ATATTGGCTGCAAACAAATTATTACTTATTTTCT----AAAAATTGAATCAAAGGGAAAAGAAAGAGAAATACTATT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1425195 96 + 108979918 -GCCAG--AAAAATACCTTATTGTTC-ATAGTGGCTGAAAACAAATTATTATTTATTTTCT----AAAAATTGAATCAAAGGTAAAAGAAAGAGAATCACTATT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1397574 96 - 111193037 -GCCAG--AAAAATACCTTATTGTTC-ATAGTGGCTGAAAACAAATTATTATTTATTTTCT----AAAAATTGAATCAAAGGTAAAAGAAAGAGAATCACTATT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1426039 96 + 3644372 -GCCAG--AAAAGTACCTTATTGTTC-ATAGTGGCTGAAAACAAATTATTATTTATTTTCT----AAAAATTGAATCAAAGGTAAAAGAAAGAGAATCACTATT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1379492 96 - 10304083 -GCCAG--AAAAATACCTTATTGTTC-ATAGTGGCTGAAAACAAATTATTATTTATTTTCT----AAAAATTGAATCAAAGGGAAAAGAAAGAGAATCACTATT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1455257 96 - 107702431 -GCCAG--AAAAATACCTTATTGTTC-ATAGTGGCTGAAAACAAATTATTATTTATTTTCT----AAAAATTGAATCAAAGGGAAAAGAAAGAGAACCACTATT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 936685 96 - 2200435 -GCCAG--AAAAATACCTTATTGTTC-ATAGTGGCTGAAAACAAATTATTATTTATTTTCT----AAAAATTGAATCAAAGGGAAAAGAAAGAGAACTACTATT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1376299 96 - 13651311 -GCCAG--AAAAATACCTTATTGTTC-ATATTGGCTGAAAACAAATTATTATTTATTTTCT----AAAAATTGAATCAAAGGGAAAAGAAAGAGAATCACTATT i colAng1.NW_012118821v1 M 5150 C 0 s calJac3.chr14 1374557 95 - 108792865 -GCCAG--AAAAATACCTTATTGTTC-ACATTGCCTGCAAACAAATCGTTATTTATTTTAT----AAAAATTGAATCAAAGGGAAAATAAGGA-AAAAAATATT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1220453 94 - 7082604 -TCCAG--AAAAATACCTTATTGTTC-ACATTGGCTGCAAACAAACTGTTATTTATTTCCT----AAAAATTGAATCAAAGGGAAAATAAGG--AAAAAATATT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1308373 84 + 1864846 -GCCAG--AAAAATACCTTATTGTTC-ACATTGGCTGCAAACAAATTGTTATTTATTTCCT----AAAAATTGAATCAAAGG------------AAAAAATATT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 101137 95 + 287728 -GCCAG--AAAAATACCTTATTGTTC-ACATTGGTTGCAAACAAATTGTTACTTATTTCCT----AAAAATTGAATCAAAGGGAAAATAAGGA-AAAAAATATT i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90004565 93 - 120129022 ----AGTAAAAATTGTTCCACTATTCGACATTAGTTAGAGACAAATTGTTATCTGGCTATT----TAAAAAAAATTTGAAGGTGAAAGAGG---AAACAATATT i mm10.chr12 C 0 I 1569 s dasNov3.JH576208 1694148 96 + 4416731 ATCAGG--GGAAAAAATCTAGTGTCC-ATATTGGCTGCAGAGTAATTTTAGTTTTTTTTCCCCTGAAAACTTGATTCAAAGAGAAAAGA-----GAAAACTCTC i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 934202 1873 + 5252280 I e panTro5.chr2A 110126965 80344 - 111504155 T a score=201197.000000 s hg38.chr2_KI270774v1_alt 106995 22 + 223625 TCTCATAAACTCACGCACACTT s panPan2.chr2A 1345896 22 + 114371477 TCTCATAAACTCACGCACACTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1370098 22 + 1464242 TCTCATAAACTCACGCACACTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1094507 22 + 81552678 TCTCATAAACTCACGCACACTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1425291 22 + 108979918 TCTTATAAACTCACGCACACTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1397670 22 - 111193037 TCTTATAAACTCACGCACACTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1426135 22 + 3644372 TCTTATAAACTCACGCACACTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1379588 22 - 10304083 TCTCATAAACTCACGCACACTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1455353 22 - 107702431 TCTCATAAACTCATGCACACTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 936781 22 - 2200435 TCTCACAAACTCATGCACACTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1376395 22 - 13651311 TCTCATAAACTCACACACACTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1374652 22 - 108792865 TCTCATAAACTCATTCACACTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1220547 22 - 7082604 TCTCATAACCTCATGCACACTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1308457 22 + 1864846 TCTCATAAACTCATGCACACTG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 101232 22 + 287728 TCTCATAAACTCATGCACGCTG i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1694244 21 + 4416731 -TCTATGAAGTCATACACACTT i dasNov3.JH576208 C 0 I 3591 e mm10.chr12 90004658 1569 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e panTro5.chr2A 110126965 80344 - 111504155 T a score=1072811.000000 s hg38.chr2_KI270774v1_alt 107017 150 + 223625 TAATATGTCTAAAATGGGCAGGAATTCCTGGGGAAGACATGGCAGTG------GGGG-TG-----GATACCAAGTGCGTAGTAAGAAGTGTGTGCTGCTCTCTTAGTAACAATTtgtgaacccaagtatctaagacagatctcagtcaatttagaacgttca s panPan2.chr2A 1345918 150 + 114371477 TAATATGTCTAAAATGGGCAGGAATTCCTGGGGAAGACATGGCAGTG------GGGG-TG-----GATACCAAGTGCGTAGTAAGAAGTGtgtgctgctctcttagtaacaatttgtgaacccaagtatctaagacagatctcagtcaatttagaacgttta i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1370120 150 + 1464242 TAATATGTCTACAATGGGCAGGAATTCCTGGGGAAGACATGGCAGTG------GGGG-TG-----GATACCAAGTGCATAGTAAGAAGTGtgtgctgctctcttagtaacaatttgtgaacccaagtatctgagacagatctcagtcaatttaggatgttta i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1094529 150 + 81552678 TAGTATGTCTAAAATGGGCAGGAATTCCTGGGGAAGACATGACAGTG------GGGG-TG-----GATACCAAGTGCATAGTAAGAAGTATGTGTTGCTCTCTTAGTAACAATTtgtgaacccaagtatctaagacagatctcagtcagtttagaacattta i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1425313 149 + 108979918 TAGTAAGTCTAAAATGGACAGGAATTCCT-GGAAAGACATGGCAGTG------GGGG-TG-----GATACCAAGTGCGTAGTAACAAGTGtgtgctgctctctcagtaacaatttgtgaacccaagtatctaagacagatctcaatccgtgtagaacgttta i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1397692 149 - 111193037 TAGTAAGTCTAAAATGGACAGGAATTCCT-GGAAAGACATGGCAGTG------GGGG-TG-----GATACCAAGTGCGTAGTAACAAGTGTGTGCTACTCTCTCAGTAACAATTtgtgaacccaagtatctaagacagatctcaatccgtgtagaacgttta i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1426157 149 + 3644372 TAGTAAGTCTAAAATGGACAGGAATTCCT-GGAAAGACATGGCAGTG------GGGG-TG-----GATACCAAGTGCGTAGTAACAAGTGtgtgctgctctctcagtaacaatttgtgaacccaagtatctaagacagatctcaatccgtgtagaacgttta i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1379610 148 - 10304083 TAGTAAGTCT-AAATGGACAGGAATTTCT-GGGAAGACATGGCAGTG------GGGA-TG-----GATACCAAGTGCGTAGTAACAAGTGtgtgctgctcttttagtaacaatttgtgaacccaagtatctaagacagatctcaatccgtgtagaacgttta i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1455375 149 - 107702431 TAGTAAGTCTAAAATGGACAAGAATTCCT-GGGAAGACATGGCAGTG------GGGG-TG-----GATACCAAGTGCATAGTAAGAAGTGTGTGCTGCCCTCTTAGTAACAATTtgtgaacccaagtatctaagacagatctcaatccgtgtagaacgttta i chlSab2.chr14 C 0 I 145 s manLeu1.NW_012103754v1 936803 149 - 2200435 TAGTAAGTCTAAAATGGACAAGAATTCCT-GGGAAGACATGGCAGTG------GGAG-TG-----GATACCAAGTGCGTAGTAAGAAGTGtgtgctgccctctcagtaacaatttgtgaacccaagtatctaaggcagatctcaatccgtgtagaacgttta i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1376417 150 - 13651311 TAGTAAGTCTAAAATGGGCAAGAATTCCTGGGGAAGACATGGCAGTG------GGGG-CG-----GATACCAAGTGCGTAGTAACGAGTGTGTGCTGCTGTCTTAGTAACAATTtgtgaacccaagtatctaagacagatctcaatccacgtagaacgttta i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1374674 155 - 108792865 TAATATGTGTAAAACGGGCAGGAATTACTTGGGAAGAGGTGGGAGTGGATAGTGGGG-TG-----GGTACCACGTGCGTAGTTAGGAGTGTGTGCTGCTCTTGTAGTGGCAATTtgtgaacccaagtat-taagacagatctcaatccatttagaacgttta i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1220569 154 - 7082604 TAATATGTGTAAAACGGGCAGGAGTTACTTGGGAGGAGGTGGGAGTGGGGAGAGGGG-TG-----GGTACCGCGTGCGTAG-TAGGAGTGTGTGCTGTTCTCGAAGTGGCAGTGtgtgaacccaggtat-gaagacagctcagaatccattgagaacgcaga i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1308479 155 + 1864846 TAATATGTGTAAAACAGGCAGGAGTTACTTGGGAAGAGGTGGGAGTGGGGAGTGGGG-TG-----GGTACCGCATGTGTAGTTAGGAGTGTGAGCTGCTCTTGTAGTGGCAATTtgtgaacccaagtgt-taggacagatggcaatctgtttacaacgttta i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 101254 161 + 287728 TAATATGTGTAAAACGGGCAGGAATTACTTGGGAAGAGGTGGGAGAGGGGAGTGGGGATGGGGGTGGTGCCACGTGCGTGGTTAGGAGTGTGTGCTGCTCTTGTGGTGGCAAGTtgtgaacccaaggac-taagacagatctcaatccacttagaacgttta i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90004658 1569 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e panTro5.chr2A 110126965 80344 - 111504155 T a score=2505466.000000 s hg38.chr2_KI270774v1_alt 107167 334 + 223625 ttttaacaaggataaggatgcaccc--gtgacgcagtgtcagga-ggtcctgaggacatgtgcccaagatggctggggcacagcttgcttttacacatcttagagagacataagacatcaatcaatacgtgtcagatttacatggtggggagcttccaggtcataagtagatgtaacagttttctgactgac---aatcagctgaaggaattattatcagtaggacggaatgtctgggttatgttaaggggttatggacaccaaggttttatt---------------------gcttcacagagaagagatggtgaatgtttcttatcagacttaaggtctgtgttgatgttgatgctgg s panPan2.chr2A 1346068 337 + 114371477 ttttaacaaggataaggatgcacccgtgtgacgcagtgtcagga-ggtcctgaggacatgtgcccaagatggctggggcacagcttgcttttacacatcttagagagacataagacatcaatcaatacgtgtcagatttacatggtggggagcttccaggtcataagtagatgtaacagttttctgactgac---aatcagctgaaggaattattatcagtaggacggaatgtctgggttatgttaaggggttatggacaccaaggttttatga--------------------gcttcacagagaagagatggtgaatgtttcttatcagacttaaggtctgtgttgatgttgatgctgg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1370270 335 + 1464242 ttttaacaaggataaggatacaccc--gtgacacagtgtcagga-ggtcctgaggacatgtgcccaagatggctggggcacagcttgcttttacacatcttagagagacataagacatcaatcaatacgtgtcagatttacatggtggggagcttccaggtcataagtagacgtaacagttttctgattgac---aatcagctgaaggaattattatcagtaggacggaatatctgggttatgttaaggggttatggacaccaaggttttatga--------------------gcttcacagagaagagatcgtgaatgtttcttatcagacttaaggtctgtgttgttgttgatgctgg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1094679 330 + 81552678 ttttaacaaggataaggatgcgccc--atgacgcagtgtcagga-ggtcctgaggacacgtgcccaagatggctggggcacagcttgcttttacacatctt----agacataagacatcaatcaatacatgtcagatttacatgg-ggggagcttccaggtcataagtagatgtaacagttttctgattggc---aatcggctgaaagaataattatcagtaggacggaatgtctgagttatgttaaggcgttatggacaccaaggttttatga--------------------gcttcacagagaagagatcgtgaatgtttcttatcagacttaaggtctgtgttgatgttgatgctgg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1425462 338 + 108979918 ttttaacaaggctaaggatgtgcct--gtaacgcagtgtcagga-ggtcctaaggacacctgcccaagatggctggggcacagcttgcttttacacatcttagagagacagaagacgtccgtcaaaacgtgtcagatttgcatggtggggagtctctgggtcataagtagatgtaacagttttctgattggcaaaaatcagttgaaagaattattatcagtgggaaggaatgtctgggtgatgtgaaggggttatggacaccagagtttcatga--------------------gcttcatagagaagagatcgtgaatgtttcttatcagacttaaggtctgtgacgatgttgatgctgg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1397841 338 - 111193037 ttttaacaaggctaaggatgtgcct--gtaacgcagtgtcagga-ggtcctaaggacacctgcccaagatggctggggcacagcttgcttttacacatcttagagagacagaggacgtccgtcaaaacgtgtcagatttgcatggtggggagtctctgggtcataagtagatgtaacagttttctgattggcaaaaatcagttgaaagaattattatcagtgggaaggaatgtctgggtgatgtgaaggggttatggacaccagagtttcatga--------------------gcttcatagagaagagatcgtgaatgtttcttatcagacttaaggtctgtgacgatgttgatgctgg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1426306 338 + 3644372 ttttaacaaggctaaggatgtgcct--gtaacgcagtgtcagga-ggtcctaaggacacctgcccaagatggctggggcacagcttgcttttacacatcttagagagacagaagacgtccgtcaaaacgtgtcagatttgcatggtggggagtctctgggtcataagtagatgtaacagttttctgattggcaaaaatcagttgaaagaattattatcagtgggaaggaatgtctgggtgatgtgaaggggttatggacaccagagtttcatga--------------------gcttcatagagaagagatcgtgaatgtttcttatcagacttaaggtctgtgacgatgttgatgctgg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1379758 338 - 10304083 ttttaacaaggctaaggatgtgcct--gtaacgcagtgtcagga-ggtcctgaggacacctgcccaagatggctggggcacagcttgcttttacacatcttagagagacagaagacgtccgtcaaaacgtgtcagatttgcatggtggggagtctccgggtcataagtagatgtaacagttttctgattggcaaaaatcagttgaaagaattatcatcagtggaaaggaatgtctgggtgatgtgaaggggttgtggacgccagggtttcatga--------------------gcttcacagagaagagatcgtgaatgcctcttatcagacttaaggtctgtgtcgatgtcgatgctgg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1455669 338 - 107702431 ttttaacaaggctaaggatgtgcct--gtaacacagtgtccgga-ggtcctgaggacacctgcccaagatggctggggcacagcttgcttttacacatcttagagagacagaagacgtccgtcaaaacgtgtcagatttgcatgatggggagtctccgggtcataagtagatgtaacagttttctgattggcaaaaatcagttgaaagaattattatcagtgggaaggaatgtctgggttatgtgaaggggttgtggacgccagggtttcatga--------------------gcttcacagagaagagattgtgaatgcctcttatcagacttaaggtcagtgtcgatgttgatgctgg i chlSab2.chr14 I 145 C 0 s manLeu1.NW_012103754v1 936952 338 - 2200435 ttttaacaaggctaaggatgtgcct--gtaacgcagtgtcagga-ggtcctgaggacacctgcccaagatggctggggcacagcttgcctttacacatcttagagagacagaagacgtccgtcaaaacgtgtcagatttgcatggtggggagtctccgggtcataagtagatgtaacagttttctgattggcaaaaatcagttgaaagaattatcatcagtaggaaggaatgtctgggtgatgtgaaggggttgtggacaccagggtttcatga--------------------gcttcatagagaagagatcgtgaatgtttcttatcagacttaaggtctgtgttgatgttgatgctgg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1376567 338 - 13651311 ttttaacaaagctaaggatgtgcct--gtaacacagtgtcaggagggtcctgaggagacctgcccaa-atggctggggcacggcttgcttttacacgtcttagagagacagaagacatgcgtcaaaacgtgtcagatttgcacggtggggagtctccaggtcataagtagatgtaacagttttctgatcggcgaaaatcagtggaaagaagtatcatcagtaggaaggaatgtctgggttgtgtgaaggggttatggacaccgaggtttcatga--------------------gcttcacagagaagagatcgtgaacacttcttatcagacttaaggtctgtgtcgatgttgatgctgg i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1374829 353 - 108792865 ttttgccaaggttagggaagtgcct--gtgtctcagtgtcagga-ggtcctgaggacatgcacccacgatggccgggggaaagcttgcttttacacaccctagaaagacataagacgccaatcaacacgtgtgagatggacgtggtggggagcttccaggtcgtaagcagatgtcacatttttctgattggc---agttgtttgcaacaatta-tatcaataggaaggaatgtctgggttgtgtcaagga-tcgtgggcaccaagcttttatgatgaagcctccaggtcagcaggcatcgcagagaatagatcgtgaatgtttcttatcagatgtaaggtctgtgctgatgttgatgccag i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1220723 350 - 7082604 ttttgccaaggttagggaagtgcct--gtg--tcaatgtcagga-ggtcctgaggacatgcgcccacggtggctgggggaaagctggcttttacacatcctagagagacataagacgtcaatcaacacatgtcagatggatgtggtggggagcttcccggtcgtaagcagatatcaca-ttttctgattggc---agttggttgaaacaagtc-tatcaataggaaggaatgtctgggttgcgttaaggc-ttgtgggcgccaagctttcatgatgaagcccccaggttagcaggcatcccagagaagaggtcgtgaatgtttctgatcagacttaaggtctgtgctggtgttgatgcctg i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1308634 353 + 1864846 ttttgccaaggttagggaagagcct--gtgtcacagtgtcagga-ggtcctgaggacatgcacccaaggtggctgggggaaagctggcttttacacatcctagagaggcataagacgtcaatcaacacctgtcagatggacatggtggggagcttcgagggcgtaagcagacgtcacatttttctgattggc---agttggttgaaacaattc-tatcaacaggaaggaatgtctgggtggccttaaggc-ttgtgggcaccaagcttttatgatgaagcctccaggttagcaggcatcccggagaaaaggtcgtgaatgtttctgatcagacttaagatctgtgctgatgttgatgccgg i cebCap1.NW_016107827v1 C 0 I 35 s aotNan1.NW_018513311v1 101415 351 + 287728 ttttgccaaggttagggaagcgtct--gtgtcacagtgtcaggc-ggtcctgaggacatgcacccacgatggctgggggaaagcttgcttttacacatcctagagagacataagacgccaatcaacacgtgtcagatggacatggtggggagcttccaggtcgtaagcagatgtcacatttttctgattggc---agttggttgaaacaat---tatcaataggaaggaatgtctgggttgcgttaaggc-ttgtgggcaccaagcttttgtgatgaagcctccaggttagcaggcatcgcagagaatagatcgtgaatgtttcgtatcagacttaaggtctgtgctgatgttgatgccgg i aotNan1.NW_018513311v1 C 0 I 35 e mm10.chr12 90004658 1569 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e panTro5.chr2A 110126965 80344 - 111504155 T a score=206770.000000 s hg38.chr2_KI270774v1_alt 107501 35 + 223625 aggggtagaaggaggtgtgtctgacccaccacctt s panPan2.chr2A 1346405 35 + 114371477 aggggtagaaggaggtgtgtctgacccaccacctt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1370605 35 + 1464242 aggggtagaaggaggcatgtctgacccactacctt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095009 35 + 81552678 aggggtagaaggaggcgtgtctgacccaccacctt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1425800 35 + 108979918 aggggcagaaggaggcgtgtctgactcaccacctt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1398179 35 - 111193037 aggggcagaaggaggcgtgtctgactcaccacctt i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1426644 35 + 3644372 aggggcagaaggaggcgtgtctgactcaccacctt i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1380096 35 - 10304083 aggggcagaaagaggcgtgtctgactcaccacctt i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1456007 35 - 107702431 aggggtggaaggaggcgtgtctgactcaccacctt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 937290 35 - 2200435 aggggtagaaggaggcatgtctgactcaccacctt i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1376905 35 - 13651311 aggggtagatggaggcgtgtctgactcaccacctt i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1375182 34 - 108792865 -tgggtagaatgaggcatgtccagcccatgacttt i calJac3.chr14 C 0 I 1 s saiBol1.JH378218 1221073 34 - 7082604 -tgggtagaatgaggcgcgtccaacccgtgacttt i saiBol1.JH378218 C 0 I 1 e aotNan1.NW_018513311v1 101766 35 + 287728 I e mm10.chr12 90004658 1569 - 120129022 I e cebCap1.NW_016107827v1 1308987 35 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e panTro5.chr2A 110126965 80344 - 111504155 T a score=2611036.000000 s hg38.chr2_KI270774v1_alt 107536 333 + 223625 ccatcgtgacctgacccagcttttcaggctaactttggaatgctcttggccgagaggtgggatccactcaggtggttaggcgaggacattagaattttatttttggtttacaAATTGCATGTTAACAGAACCCTTTTGAAATCAATGCCTTGATCCTAAGGATGCATTAGAGTGAGGGAAGACCAGGAGAGGCATCAACTGGGGAGACTATTGGAAAGATTTGCCTTTTGATAGCTCTCAAAAAAATACACTATACTATACACCTATTCCAACTATGTttctttccttaagaaatactgtttctactgtggaacagtcattgttctagatgcc s panPan2.chr2A 1346440 332 + 114371477 ccatcgtgacctgacccagcttttcaggctaactttggaatgctcttggccgagaggtgggatccactcaggtggttaggcgaggacattagaattttatttttggtttacaaattgcatgttaacagaacccttttgaaatcaatgccttgatcctaaggatgcattagagtgagggaagaccaggagaggcatcaactggggagactattggaaagatttgccttttgctggctctc-aaaaaatacagtatactatacacctattccaactatgTttctttccttaagaaatactgtttctactgtggaacagtcattgttctagatgcc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1370640 331 + 1464242 ccatcatgacctgacccagcttttcaggctaactttggaatgctcttggccgagaggtgagatccactcaggtggttaggcgaggacattagaattttatttttggtttacaaattgcatgttaacagaacctttttgaaatcaatgccttgatcctaaggaTGCATGAGAGTGAGGGAAGACCAGGAGAGGCATCAACTGGGGAGACTATTGGAAAGATTTGCC-ACTGATAGCTCTC-AAAATATACACTATACTATACAACTATTCCAACTATGTttctttccttaagaaatactgtttctactgtggaacagtcattgttctagatgcc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095044 327 + 81552678 ccatcatgacctgaccccgcttttcaggctaactttggaatgctcttggccgagaggcgaggtccactcaggtggttaggcgaggacattagaattttatttttggttcacaAATTGCATGTTAACAGAACCCTTTTGAAATCAGTGCCTTGATCCTAAGGATGCATTAGAGTGAGGGAAGCCCGGGAGAGGTGTCGGCTGGGGAGACTATTGGAAAGATTTGCCTTTTGATAGCTCTC-AAAAAATAC-----ACTATACACCTATTCCGACTGTGTttctttccttaagaaatactgtttctactgtggaacagtcattgttctagatgcc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1425835 327 + 108979918 ctatcaccgtctgaaccagcttttcgggctaactttggaatgctcttggtcgagaggcggggtccactcaggtgattaggcgaggacattagaattttacttttggtttacaaattatatgttaacaggacccttttgaaatcaatgccttgatcctaaggatgcattagagtgagggaagcccaggagagatgtcagctggggacactattggaaaaatttgccttttgatatcgctc-aaaaaatac-----actatacacctattccaactatgTttctttccttaagaaatactatttctactgtggaacagtcattgttctggatgcc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1398214 327 - 111193037 ccatcaccgtctgaaccagcttttcgggctaactttggaatgctcttggtcgagaggcggggtccactcaggtgattaggcgaggacattagaattttacttttggtttacaAATTATATGTTAACAGGACCCTTTTGAAATCAATGCCTTGATCCTAAGGATGCATTAGAGTGAGGGAAGCCCAGGAGAGATGTCAGCTGGGGACACTATTGGAAAAATTTGCCTTTTGATATCGCTC-AAAAAATAC-----ACTATACACCTATTCCAACTATGTttctttccttaagaaatactatttctactgtggaacagtcattgttctggatgcc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1426679 327 + 3644372 ccatcaccgtctgaaccagcttttcgggctaactttggaatgctcttggttgagaggcggggtccactcaggtgattaggcgaggacattagaattttacttttggtttacaaattatatgttaacaggacccttttgaaatcaatgccttgatcctaaggatgcattagagtgagggaagcccaggagagatgtcagctggggacactattggaaaaatttgccttttgatatcgctc-aaaaaatac-----actatacacctattccaactatgTttctttccttaagaaatactatttctactgtggaacagtcattgttctggatgct i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1380131 327 - 10304083 ccatcaccgcctgaaccagcttttcgggctaactttggaatgctcttggtcgagaggcagggtccactcaggtggttaggcgaggacattagaattttacttttggtttacaaattacatgttaacaggacccttttgaaatcaatgccttgatcctaaggatgcattagagtgagggaagcccaggagagatgtcagctggggacactactggaaaaatttgccttttgatatcgctc-aaaAAATAC-----ACTCTACACCTATTCCAACTATGTttctttccttaagaaatactgtttctactgtggaacagtcattgttctggatgcc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1456042 327 - 107702431 ccatcacggcctgaaccagcttttcaggctaactttggaatgctcttggccgagagacggggtccactcaggtggttaggcgacgacattagaattttacttttggtttacaAATTACATGTTAACAGGACCCTTTTGAAATCAATGCCTTGATCCTAAGGATGCATTAGAGTGAGGGAAGCCCAGGAGAGATGCCAGCTGGGGACACTATTGGAAAAATTTGCCTTTTGATATCACTG-AAAAAATAC-----ACTCTACACCTATTCCAGCTATGTttctttccttaagaaatactgtttctactgtggaacagtcattgttctggatgcc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 937325 327 - 2200435 ccatcacggcctgaaccagcttttcggggtaactttggaatgctcttggccgagaggcagggtccactcaggtggttaggcgaggacattagaattttacttttggtttacaaattacatgttaacaggacccttttgaaatcaatgccttgatcctaaggatgcattagagtgagggaagcccaggagagatgtcagctggggacactattggaaaaatttgccttttgatatcgctc-aaaAAATAC-----ACTCTACACCTATTCCAACTATGTttctttccttaagaaatactgtttctactgtggaacagtcattgttctggatgcc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1376940 326 - 13651311 ccatcacggcctgaaccagcttttcaggctaactttggaatgcccttggccgagaggcggggtccactcaggtggttaggcaaggacattagaattttacttttggtttacaAAttacatgttaatagga-ccgtttgaaatcaatgccttgatcctaaggaTGCATGAGAGTGAGGGAAGCCCAGGAGAGATGTCAGCTGGGGACACTATTGGAAAAATTTGCCTTCTGATAATGCTC-AAAAAATAC-----ACTATACACCTATTCCAACTATGTTTCTTTCCTTAAGAAATACCGTTTctactgtggaacagtcattgttctagacgcc i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1375217 324 - 108792865 ccattgtggcctgaaccagcttttccggttaactttggaatgctcttggctgagacgaggaatccactcaggtgattagaggaggacattcaaatcttatttttggtttacaAATTGCATGTTACCAGCCCCCCTTTGAAATCAGCGCCTTGATCCTAAGGATGCACTGGAGTGGGGGGAGCCAGGG-GAGGTGTCCGCTGCAGAGACTCTTGGCAAGTTTCCCCTTGTGATAACTCTC--AAAAATAC-----CCCATATACCTGTTCCAACTATGTTTCTTTCCTTAAGAAATGCTGTTTCTGCTGAGG-ATAGTCATtgttctagatgct i calJac3.chr14 I 1 C 0 s saiBol1.JH378218 1221108 325 - 7082604 ccgtcatggcctgaaccagcttttccagttaactttggaatacttttggccgagaggaagaatccactcaggtggttgggggaggacattagaatcttatttttggtttataAACTGCATGTTACCAGGCCCCTTTTGAAGTCAATGCCTTGATCCTAAGGACGCACTGGAGTGGGGGAAGCCAGGGAGAGGTGCCCGCTGC--AGACTCTTGGCAAGATTTGCCTTTTGATAGCTCTC-AAAAAATGC-----CCTATGTACCTATTCCAACTATGTttctttcctttagaaatactgtttctgctgaggaacagtcattgttctaggtgct i saiBol1.JH378218 I 1 C 0 s cebCap1.NW_016107827v1 1309022 319 + 1864846 ccatcacagcctgaaccagcttctctggttaactttggaatgctcttggctgagacgaggaattcactcaggtggttaggggaggacattagcatcttatttttggtttacaAACTGCATGTTA------CCCTTTTGAAATCAATGCCTTGATCCTAAGGATGCATTGGAGT-GGGGAAGCCAGGGAGAGGAGTCCGCTGCAGAGACTCTTGGCAAGATTTGCCTTTGGAGAGCTCCC-AAAAAATAC-----CC-ATATACCTATTCCAACTATGTttctttccttaagaaatactgtttctgctgaggaacagtcattgttctaggtgct i cebCap1.NW_016107827v1 I 35 C 0 s aotNan1.NW_018513311v1 101801 326 + 287728 ccgtcacggcctgaaccagcttttccggttacctttggaatgctcttggccgagatgaggaatccactcaggtggttaggggaggacattagaatcttatttttggtttacaAAttgcatgttaccaggccccttttgaaatcaacgccttgatcctaaggatgcactggagtgggggaagccagggagaggtgtccgctgcagagactcttggcaagatttgccttttgatagctctc-aaaAATTAC-----CT-GTATACCTATTCCAACTGTGTTTCTTTCCTTAAGAAATTCTGTTTCTGCTGAGGAACAGTCATCGTTCCAGATGCT i aotNan1.NW_018513311v1 I 35 C 0 e mm10.chr12 90004658 1569 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e panTro5.chr2A 110126965 80344 - 111504155 T a score=157438.000000 s hg38.chr2_KI270774v1_alt 107869 15 + 223625 gggatacagagatga s panTro5.chr2A 1396179 15 + 111504155 GGGATACAGAGATGC i panTro5.chr2A I 22434 C 0 s panPan2.chr2A 1346772 15 + 114371477 gggatacagagatga i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1370971 15 + 1464242 aggatacagaaatga i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095371 15 + 81552678 aggatacagagatga i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1426162 15 + 108979918 gggatacagagatga i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1398541 15 - 111193037 gggatacagagatga i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1427006 15 + 3644372 gggatacagagatga i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1380458 15 - 10304083 gggatacagagatga i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1456369 15 - 107702431 gggatacagagatga i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 937652 15 - 2200435 gggatacagagatga i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1377266 15 - 13651311 gggatacagagatga i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1375541 15 - 108792865 gggatgcagagatga i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1221433 15 - 7082604 gggatacagagatga i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1309341 15 + 1864846 gggatacagagatga i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 102127 15 + 287728 GCGATACAGAGATGA i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90004658 1569 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I a score=159293.000000 s hg38.chr2_KI270774v1_alt 107884 21 + 223625 GTTCGATCATTTCATATCCTC s panTro5.chr2A 1396194 21 + 111504155 GTTAGATCATTTCATATCCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1346787 21 + 114371477 GTTCGACCATTTCATATTCTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1370986 21 + 1464242 GTTCGATCATTTCATATCCTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095386 21 + 81552678 GTTCAATCATTTCATATTCTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1426177 21 + 108979918 GTTAGATCGTTTCATATTCTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1398556 21 - 111193037 GTTAGATCGTTTCATATTCTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1427021 21 + 3644372 gttagatcgtttcatattctc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1380473 21 - 10304083 gttagatcgtttcatattctc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1456384 21 - 107702431 GTTAGATCGTTTCATATTCTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 937667 21 - 2200435 gttagatcgtttcatattctc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1377281 21 - 13651311 gttagatcgtttcacattctc i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1375556 21 - 108792865 attagatcattttatattctc i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1309356 21 + 1864846 aTCCTATCATTTTATATTCTC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 102142 21 + 287728 ATGAGATCTTTTTATATTCCC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I a score=7697.000000 s hg38.chr2_KI270774v1_alt 107905 2 + 223625 AG s panTro5.chr2A 1396215 2 + 111504155 AG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1346808 2 + 114371477 AG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371007 2 + 1464242 AG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095407 2 + 81552678 CG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1426198 2 + 108979918 AG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1398577 2 - 111193037 AG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1427042 2 + 3644372 ag i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1380494 2 - 10304083 ag i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1456405 2 - 107702431 CG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 937688 2 - 2200435 ag i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1377302 2 - 13651311 ag i colAng1.NW_012118821v1 C 0 C 0 s aotNan1.NW_018513311v1 102163 2 + 287728 AC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C a score=37861.000000 s hg38.chr2_KI270774v1_alt 107907 7 + 223625 AAGTCCG s panTro5.chr2A 1396217 7 + 111504155 AAGTCTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1346810 7 + 114371477 AAGTCCG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371009 7 + 1464242 AAGTCCG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095409 7 + 81552678 AAGTCCG i nomLeu3.chr19 C 0 T 81 s rheMac8.chr13 1426200 7 + 108979918 AAGTCCG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1398579 7 - 111193037 AAGTCCG i macFas5.chr13 C 0 T 81 s cerAty1.NW_012000820v1 1380496 7 - 10304083 aagtccg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1456407 7 - 107702431 AAGTCCG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 937690 7 - 2200435 aagtccg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1377304 7 - 13651311 aagtccg i colAng1.NW_012118821v1 C 0 C 0 s aotNan1.NW_018513311v1 102165 7 + 287728 AGGTCCC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C a score=111547.000000 s hg38.chr2_KI270774v1_alt 107914 97 + 223625 TGCTCCTTCTGT---AAAGTCATTGTTCTAGATGCCGGGATACAGAGATGCGTTAGATCATTTCATATCCTCAGAAGTCTATGCTCCTTCTGTAAAGTCA s panTro5.chr2A 1396224 97 + 111504155 TGCTCCTTCTGT---AAAGTCATTTTTCTAGATGCTGGGATACAGAGATGAGTTTGATCATTTCATATCCTCAGAAGTCCATGCTCCCTCTATAAAGTCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1346817 97 + 114371477 Tgctccttctgt---aaagtcattgttctagatgccgggatacagagatgcgttagatcatttcatatcctcagaagtctaTGCTCCTTCTGTAAAGTCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371016 97 + 1464242 Tgctccttctgt---aaagtcattgttctagatgctgggatacagagatgcgttagatcacttcatatcctcagaagtctaTGCTCCTTCTATAAAGTCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095335 100 + 81552678 tgtttctactgtggaacagtcattgttctagatgccaggatacagagatgaGTTCAATCATTTCATATTCTCCGAAGTCCGTGCTCCTTCTGTAAAGACA i nomLeu3.chr19 T 81 T 78 s macFas5.chr13 1398505 100 - 111193037 tatttctactgtggaacagtcattgttctggatgccgggatacagagatgaGTTAGATCGTTTCATATTCTCAGAAGTCCGTGCTCCTTCTGTAAAGACA i macFas5.chr13 T 81 T 78 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C a score=71170.000000 s hg38.chr2_KI270774v1_alt 108011 58 + 223625 TTTTTCTAGATGTTGGGATACAGAGATGAGTTTGATCATTTCATATCCTCAGAAGTCC s panTro5.chr2A 1396321 58 + 111504155 TTGTTCTAGATGCCGGGACACAGAGATGAGTTTGATCATTTCATATCCTCAAAAGTCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1346914 58 + 114371477 TTTTTCTAGATGCTGGGATACAGAGATGAGTTTGATCATTTCATATCCTCAGAAGTCC i panPan2.chr2A C 0 I 78 s gorGor5.CYUI01015607v1 1371113 58 + 1464242 TTTTTCTAGATGCTGGGATACAGAGATGAGTTTGATCATTTCATATCCTCAGAAGTCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095357 58 + 81552678 ttgttctagatgccaggatacagagatgaGTTCAATCATTTCATATTCTCCGAAGTCC i nomLeu3.chr19 T 78 C 0 s macFas5.chr13 1398527 58 - 111193037 ttgttctggatgccgggatacagagatgaGTTAGATCGTTTCATATTCTCAGAAGTCC i macFas5.chr13 T 78 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C a score=25493.000000 s hg38.chr2_KI270774v1_alt 108069 20 + 223625 GTGCTCCTTCTGTAAAGTCA s panTro5.chr2A 1396379 20 + 111504155 GTGCTCCTTCTGTAAAGTCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347050 20 + 114371477 GTGCTCCTTCTGTAAAGTCA i panPan2.chr2A I 78 C 0 s gorGor5.CYUI01015607v1 1371171 20 + 1464242 ATgctccttctataaagtca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095415 20 + 81552678 GTGCTCCTTCTGTAAAGACA i nomLeu3.chr19 C 0 T 100 s macFas5.chr13 1398585 20 - 111193037 GTGCTCCTTCTGTAAAGACA i macFas5.chr13 C 0 T 83 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C a score=17227.000000 s hg38.chr2_KI270774v1_alt 108089 33 + 223625 TTGTTCTGGATGCTGGGATACAGAGATGAGTTT s panTro5.chr2A 1396399 33 + 111504155 TTGTTGTGGATGCTGGGATACAGAGATGAGTTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347070 33 + 114371477 TTGTTCTGGATGCTGGGATACAGAGATGAGTTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371191 33 + 1464242 ttgttctagatgctgggatacagagatgagttt i gorGor5.CYUI01015607v1 C 0 I 233 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e macFas5.chr13 1398605 83 - 111193037 T e rheMac8.chr13 1426207 0 + 108979918 C e nomLeu3.chr19 1095435 100 + 81552678 T a score=55599.000000 s hg38.chr2_KI270774v1_alt 108122 104 + 223625 GATTATTTCATATCCTCAAAAGTCtgagctccttctatgcagtcattgttctagatgccgggatacagagatgagttagattatttcatattctcagaagtccg s panTro5.chr2A 1396432 104 + 111504155 GATCATTTCATATCCTCAAAAGTCTGAGCTCCTTCTATGGAGTCATTGTTCTAAATGCCGGGATACAGAGATGAGTTAGATTATTTCATATTCTCAGAAGTCCG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347103 104 + 114371477 GATCATTTCATATCCTCAAAAGTCtgagctccttctatgcagtcattgttctagatgccgggatacagagatgagttagatgatttcatattctcagaagtccg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371457 104 + 1464242 GATCATTTCATATCCTCAAAAGTCtgagctccttctatgcagtcattgttctagatgccgggatacagagatgagttagatcatttgatattctcagaagtctg i gorGor5.CYUI01015607v1 I 233 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e macFas5.chr13 1398605 83 - 111193037 T e rheMac8.chr13 1426207 0 + 108979918 C e nomLeu3.chr19 1095435 100 + 81552678 T a score=8596.000000 s hg38.chr2_KI270774v1_alt 108226 14 + 223625 tgctccttctgt---aa s panTro5.chr2A 1396536 14 + 111504155 TGCTCCTTCTGT---AA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347207 14 + 114371477 tgctccttctgt---aa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371561 14 + 1464242 tgctccttctgt---aa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095335 17 + 81552678 tgtttctactgtggaac i nomLeu3.chr19 T 100 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e macFas5.chr13 1398605 83 - 111193037 T e rheMac8.chr13 1426207 0 + 108979918 C a score=7095.000000 s hg38.chr2_KI270774v1_alt 108240 5 + 223625 agtca s panTro5.chr2A 1396550 5 + 111504155 AGTCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347221 5 + 114371477 agtca i panPan2.chr2A C 0 T 467 s gorGor5.CYUI01015607v1 1371575 5 + 1464242 agtca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095352 5 + 81552678 agtca i nomLeu3.chr19 C 0 I 1 s macFas5.chr13 1398522 5 - 111193037 agtca i macFas5.chr13 T 83 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C a score=5445.000000 s hg38.chr2_KI270774v1_alt 108245 4 + 223625 -tgtt s panTro5.chr2A 1396555 4 + 111504155 -TGTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1346759 4 + 114371477 -tgtt i panPan2.chr2A T 467 C 0 s gorGor5.CYUI01015607v1 1371580 4 + 1464242 -tgtt i gorGor5.CYUI01015607v1 C 0 T 466 s nomLeu3.chr19 1095358 4 + 81552678 -tgtt i nomLeu3.chr19 I 1 C 0 s macFas5.chr13 1398527 5 - 111193037 ttgtt i macFas5.chr13 C 0 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C a score=86305.000000 s hg38.chr2_KI270774v1_alt 108249 69 + 223625 ctagatgccaggatacagaGATGAGTTCGATCATTTCACATTCTCAGAAGTCTATGCTCCTCCTGTAAA s panTro5.chr2A 1396559 69 + 111504155 CTAGATGCCAGGATACAGAGATGAGTTCGATCATTTCATATTCTCAGAAGTCTGTGCTCCTCCTGTAAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1346763 69 + 114371477 ctagatgccgggatacagagatgaGTTCGACCATTTCATATTCTCAGAAGTCCGTgctccttctgtaaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371118 69 + 1464242 CTAGATGCTGGGATACAGAGATGAGTTTGATCATTTCATATCCTCAGAAGTCCATgctccttctataaa i gorGor5.CYUI01015607v1 T 466 C 0 s nomLeu3.chr19 1095362 69 + 81552678 ctagatgccaggatacagagatgaGTTCAATCATTTCATATTCTCCGAAGTCCGTGCTCCTTCTGTAAA i nomLeu3.chr19 C 0 T 80 s macFas5.chr13 1398532 69 - 111193037 ctggatgccgggatacagagatgaGTTAGATCGTTTCATATTCTCAGAAGTCCGTGCTCCTTCTGTAAA i macFas5.chr13 C 0 T 77 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C a score=-75.000000 s hg38.chr2_KI270774v1_alt 108318 1 + 223625 C s panTro5.chr2A 1396628 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1346832 1 + 114371477 g i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371187 1 + 1464242 g i gorGor5.CYUI01015607v1 C 0 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e macFas5.chr13 1398601 77 - 111193037 T e rheMac8.chr13 1426207 0 + 108979918 C e nomLeu3.chr19 1095431 80 + 81552678 T a score=61478.000000 s hg38.chr2_KI270774v1_alt 108319 75 + 223625 TCATTGTTCTAGATGCCGGGATACAGAGATGAGTTAGATCATTTCATATTCTCAGAAGTCCATGCCCGTTCTGTG s panTro5.chr2A 1396629 75 + 111504155 TCATTGTTCTAGATGCCGGGATACAGAGATGAGTTAGATCATTTCATATCCTCAGAAGTCCGTGTTCCTTCTGTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1346833 75 + 114371477 tcattgttctagatgccgggatacagagatgcgttagatcatttcatatcctcagaagtctaTGCTCCTTCTGTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371188 74 + 1464242 tcattgttctagatgctgggatacagagatgagtttgatcatttcatatcctcagaagtccgtgc-ccttctgta i gorGor5.CYUI01015607v1 C 0 C 0 s macFas5.chr13 1398524 75 - 111193037 tcattgttctggatgccgggatacagagatgaGTTAGATCGTTTCATATTCTCAGAAGTCCGTGCTCCTTCTGTA i macFas5.chr13 T 77 T 78 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C e nomLeu3.chr19 1095431 80 + 81552678 T a score=8007.000000 s hg38.chr2_KI270774v1_alt 108394 7 + 223625 CAGTCAT s panTro5.chr2A 1396704 7 + 111504155 AAGTCAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1346908 7 + 114371477 AAGTCAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371262 7 + 1464242 aagtcat i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095351 7 + 81552678 cagtcat i nomLeu3.chr19 T 80 C 0 s macFas5.chr13 1398521 7 - 111193037 cagtcat i macFas5.chr13 T 78 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C a score=24427.000000 s hg38.chr2_KI270774v1_alt 108401 32 + 223625 TTTTCTAGATGCCGGGATACAGAGATGCGTTA s panPan2.chr2A 1346915 32 + 114371477 TTTTCTAGATGCTGGGATACAGAGATGAGTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371269 32 + 1464242 tgttttagatgccgggatacagaGATGCGTTA i gorGor5.CYUI01015607v1 C 0 T 77 s nomLeu3.chr19 1095358 32 + 81552678 tgttctagatgccaggatacagagatgaGTTC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1398528 32 - 111193037 tgttctggatgccgggatacagagatgaGTTA i macFas5.chr13 C 0 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C e panTro5.chr2A 1396711 0 + 111504155 C a score=24391.000000 s hg38.chr2_KI270774v1_alt 108433 29 + 223625 GATCATTTCATATTCTCAGAAGTCCGTGC s panPan2.chr2A 1346947 29 + 114371477 GATCATTTCATATCCTCAGAAGTCCATGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371224 29 + 1464242 gatcatttcatatcctcagaagtccgtgc i gorGor5.CYUI01015607v1 T 77 I 77 s nomLeu3.chr19 1095390 29 + 81552678 AATCATTTCATATTCTCCGAAGTCCGTGC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1398560 29 - 111193037 GATCGTTTCATATTCTCAGAAGTCCGTGC i macFas5.chr13 C 0 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C e panTro5.chr2A 1396711 0 + 111504155 C a score=12316.000000 s hg38.chr2_KI270774v1_alt 108462 16 + 223625 CCCTTCTGTAAAGTCA s panPan2.chr2A 1346976 16 + 114371477 TCCCTCTATAAAGTCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371330 16 + 1464242 TCCTTCTGTAAAGTCA i gorGor5.CYUI01015607v1 I 77 C 0 s nomLeu3.chr19 1095419 16 + 81552678 TCCTTCTGTAAAGACA i nomLeu3.chr19 C 0 T 78 s macFas5.chr13 1398589 16 - 111193037 TCCTTCTGTAAAGACA i macFas5.chr13 C 0 T 78 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C e panTro5.chr2A 1396711 0 + 111504155 C a score=61003.000000 s hg38.chr2_KI270774v1_alt 108478 77 + 223625 TTGTTCTAGATACCGGGATACAGAGATGCGTTAGATCATTTCATATCCTCAGAAGTCCGTACTCCTTATGTAAAGTC s panPan2.chr2A 1346992 77 + 114371477 TTGTTCTAGATGCCGGGACACAGAGATGAGTTTGATCATTTCATATCCTCAAAAGTCCGTGCTCCTTCTGTAAAGTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371346 77 + 1464242 TTTTTCTAGATGCTGGGATACAGAGATGAGTTTGATCATTTCATATCCTCAGAAGTCCGTGCCCCTTCTGTAAAGTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095357 77 + 81552678 ttgttctagatgccaggatacagagatgaGTTCAATCATTTCATATTCTCCGAAGTCCGTGCTCCTTCTGTAAAGAC i nomLeu3.chr19 T 78 C 0 s macFas5.chr13 1398527 77 - 111193037 ttgttctggatgccgggatacagagatgaGTTAGATCGTTTCATATTCTCAGAAGTCCGTGCTCCTTCTGTAAAGAC i macFas5.chr13 T 78 T 119 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C e panTro5.chr2A 1396711 0 + 111504155 C a score=546.000000 s hg38.chr2_KI270774v1_alt 108555 1 + 223625 A s panPan2.chr2A 1347069 1 + 114371477 A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371423 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095434 1 + 81552678 A i nomLeu3.chr19 C 0 T 120 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e macFas5.chr13 1398604 119 - 111193037 T e rheMac8.chr13 1426207 0 + 108979918 C e panTro5.chr2A 1396711 0 + 111504155 C a score=302.000000 s hg38.chr2_KI270774v1_alt 108556 2 + 223625 TC s panPan2.chr2A 1347070 2 + 114371477 TT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371424 2 + 1464242 TT i gorGor5.CYUI01015607v1 C 0 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e macFas5.chr13 1398604 119 - 111193037 T e rheMac8.chr13 1426207 0 + 108979918 C e nomLeu3.chr19 1095435 120 + 81552678 T e panTro5.chr2A 1396711 0 + 111504155 C a score=81277.000000 s hg38.chr2_KI270774v1_alt 108558 154 + 223625 GTTCTAGATGCCGGGATACAGAGATGAGTTTGATCATTTCATATCCTCAAAAGTCtgagctccttctatgcagtcattgttctagatgccaggatacagagatgcattagatcatttcatatcctcagaagtctatgctccttctgtaaagtca s panTro5.chr2A 1396711 154 + 111504155 GTTCTAGATGCCGGGATACAGAGATGAGTTCGATCATTTCATATCCTCAAAAGTCtgagctccttctgtgcagtcattgttctagatgccaggatacagagatgcattagatcatttcatatcctcagaagtctaTGCTCCTTCTGTAAAGTCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347072 154 + 114371477 GTTCTGGATGCTGGGATACAGAGATGAGTTCGATCATTTCATATCCTCAAAAGTCtgagctccttctatgcagtcattgttctagatgccgggatacagagatgagttagatgatttcatattctcagaagtccgtgctccttctgtaaagtca i panPan2.chr2A C 0 T 468 s gorGor5.CYUI01015607v1 1371426 154 + 1464242 GTTCTAGATGCCGGGATACAGAGATGAGTTTGATCATTTCATATCCTCAAAAGTCtgagctccttctatgcagtcattgttctagatgccgggatacagagatgagttagatcatttgatattctcagaagtctgtgctccttctgtaaagtca i gorGor5.CYUI01015607v1 C 0 I 155 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e macFas5.chr13 1398604 119 - 111193037 T e rheMac8.chr13 1426207 0 + 108979918 C e nomLeu3.chr19 1095435 120 + 81552678 T a score=18412.000000 s hg38.chr2_KI270774v1_alt 108712 39 + 223625 ttgttctagatgctgggatacagaGATGAGTTATATCAT s panTro5.chr2A 1396865 39 + 111504155 Ttgttctagatgctgggatacagagatgagttagatcat i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1346758 39 + 114371477 ttgttctagatgccgggatacagagatgaGTTCGACCAT i panPan2.chr2A T 468 C 0 s gorGor5.CYUI01015607v1 1371735 38 + 1464242 TTGTTCTAGATGCCGGGATACAGAGAT-AGTTAGATCAT i gorGor5.CYUI01015607v1 I 155 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e macFas5.chr13 1398604 119 - 111193037 T e rheMac8.chr13 1426207 0 + 108979918 C e nomLeu3.chr19 1095435 120 + 81552678 T a score=4499.000000 s hg38.chr2_KI270774v1_alt 108751 22 + 223625 TTTCTATCCTCA--GAAGTCTGTA s panTro5.chr2A 1396904 22 + 111504155 tttctatcctca--GAAGTCTGTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1346797 22 + 114371477 TTCATATTCTCA--GAAGTCCGTg i panPan2.chr2A C 0 I 545 s gorGor5.CYUI01015607v1 1371773 18 + 1464242 TTCATAT-CTCA---AATCCTG-- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095315 22 + 81552678 Tttctttccttaagaaatactg-- i nomLeu3.chr19 T 120 C 0 s macFas5.chr13 1398485 22 - 111193037 Tttctttccttaagaaatacta-- i macFas5.chr13 T 119 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C a score=1808.000000 s hg38.chr2_KI270774v1_alt 108773 2 + 223625 CT s panTro5.chr2A 1396926 2 + 111504155 CT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347364 2 + 114371477 CT i panPan2.chr2A I 545 C 0 s gorGor5.CYUI01015607v1 1371791 2 + 1464242 CT i gorGor5.CYUI01015607v1 C 0 T 540 s nomLeu3.chr19 1095337 2 + 81552678 tt i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1398507 2 - 111193037 tt i macFas5.chr13 C 0 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C a score=29801.000000 s hg38.chr2_KI270774v1_alt 108775 28 + 223625 CCTTCTGT---AAAGTCATTGTTCTAGATGC s panTro5.chr2A 1396928 28 + 111504155 CCTTCTGT---AAAGTCATTGTTCTAGATGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347366 28 + 114371477 CCTTCTGT---AAAGTCGTtgttctagatgc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371253 28 + 1464242 ccttctgt---aaagtcattgttttagatgc i gorGor5.CYUI01015607v1 T 540 C 0 s nomLeu3.chr19 1095339 31 + 81552678 tctactgtggaacagtcattgttctagatgc i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1398509 31 - 111193037 tctactgtggaacagtcattgttctggatgc i macFas5.chr13 C 0 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C a score=34736.000000 s hg38.chr2_KI270774v1_alt 108803 45 + 223625 CGGGATACAGAGATGCGTTAGATCATTTCATATCCTCAGAAGTCT s panPan2.chr2A 1347394 45 + 114371477 tgggatacagagatgagttcgatcatttcatatcctcaaAAGTCC i panPan2.chr2A C 0 T 467 s gorGor5.CYUI01015607v1 1371281 45 + 1464242 cgggatacagaGATGCGTTAGATCACTTCATATCCTCAGAAGTCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095370 45 + 81552678 caggatacagagatgaGTTCAATCATTTCATATTCTCCGAAGTCC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1398540 45 - 111193037 cgggatacagagatgaGTTAGATCGTTTCATATTCTCAGAAGTCC i macFas5.chr13 C 0 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C e panTro5.chr2A 1396956 0 + 111504155 C a score=187.000000 s hg38.chr2_KI270774v1_alt 108848 1 + 223625 A s panPan2.chr2A 1346972 1 + 114371477 A i panPan2.chr2A T 467 C 0 s gorGor5.CYUI01015607v1 1371326 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095415 1 + 81552678 G i nomLeu3.chr19 C 0 T 81 s macFas5.chr13 1398585 1 - 111193037 G i macFas5.chr13 C 0 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C e panTro5.chr2A 1396956 0 + 111504155 C a score=11458.000000 s hg38.chr2_KI270774v1_alt 108849 19 + 223625 TGCTCCTTCTGT---AAAGTCA s panPan2.chr2A 1346973 19 + 114371477 TGCTCCCTCTAT---AAAGTCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371327 19 + 1464242 TGCTCCTTCTGT---AAAGTCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095335 22 + 81552678 tgtttctactgtggaacagtca i nomLeu3.chr19 T 81 C 0 s macFas5.chr13 1398586 19 - 111193037 TGCTCCTTCTGT---AAAGACA i macFas5.chr13 C 0 T 78 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C e panTro5.chr2A 1396956 0 + 111504155 C a score=63547.000000 s hg38.chr2_KI270774v1_alt 108868 78 + 223625 TTGTTCTAGATGCCAGGATACAGAGATGAGTTCGATCATTTCATATCCTCAGAAGTCTGTGCTCCTTCCGTAAAGTCA s panPan2.chr2A 1346992 78 + 114371477 TTGTTCTAGATGCCGGGACACAGAGATGAGTTTGATCATTTCATATCCTCAAAAGTCCGTGCTCCTTCTGTAAAGTCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371346 78 + 1464242 TTTTTCTAGATGCTGGGATACAGAGATGAGTTTGATCATTTCATATCCTCAGAAGTCCGTGCCCCTTCTGTAAAGTCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095357 78 + 81552678 ttgttctagatgccaggatacagagatgaGTTCAATCATTTCATATTCTCCGAAGTCCGTGCTCCTTCTGTAAAGACA i nomLeu3.chr19 C 0 T 78 s macFas5.chr13 1398527 78 - 111193037 ttgttctggatgccgggatacagagatgaGTTAGATCGTTTCATATTCTCAGAAGTCCGTGCTCCTTCTGTAAAGACA i macFas5.chr13 T 78 T 78 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C e panTro5.chr2A 1396956 0 + 111504155 C a score=47011.000000 s hg38.chr2_KI270774v1_alt 108946 59 + 223625 TTGTTCTAGATGCCGGGATACAGAGGTGAGTTTGATCATTTCATATACTCAGAAGTCCA s panPan2.chr2A 1347070 59 + 114371477 TTGTTCTGGATGCTGGGATACAGAGATGAGTTCGATCATTTCATATCCTCAAAAGTCtg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371424 59 + 1464242 TTGTTCTAGATGCCGGGATACAGAGATGAGTTTGATCATTTCATATCCTCAAAAGTCtg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095357 59 + 81552678 ttgttctagatgccaggatacagagatgaGTTCAATCATTTCATATTCTCCGAAGTCCG i nomLeu3.chr19 T 78 T 81 s macFas5.chr13 1398527 59 - 111193037 ttgttctggatgccgggatacagagatgaGTTAGATCGTTTCATATTCTCAGAAGTCCG i macFas5.chr13 T 78 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C e panTro5.chr2A 1396956 0 + 111504155 C a score=5429.000000 s hg38.chr2_KI270774v1_alt 109005 14 + 223625 TGCTCCTTCTGTA---A s panPan2.chr2A 1347129 14 + 114371477 agctccttctatg---c i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371483 14 + 1464242 agctccttctatg---c i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095335 17 + 81552678 tgtttctactgtggaac i nomLeu3.chr19 T 81 C 0 s macFas5.chr13 1398586 14 - 111193037 TGCTCCTTCTGTA---A i macFas5.chr13 C 0 T 78 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C e panTro5.chr2A 1396956 0 + 111504155 C a score=69634.000000 s hg38.chr2_KI270774v1_alt 109019 83 + 223625 AGTCATTGTTCTAGATGCCAGGATACAGAGATGAGTTCGATCATTTCATATTCTCAGAAGTCCGTGCTCCTTCCATAAAGTCA s panPan2.chr2A 1347143 83 + 114371477 agtcattgttctagatgccgggatacagagatgagttagatgatttcatattctcagaagtccgtgctccttctgtaaagtca i panPan2.chr2A C 0 I 77 s gorGor5.CYUI01015607v1 1371497 83 + 1464242 agtcattgttctagatgccgggatacagagatgagttagatcatttgatattctcagaagtctgtgctccttctgtaaagtca i gorGor5.CYUI01015607v1 C 0 T 467 s nomLeu3.chr19 1095352 83 + 81552678 agtcattgttctagatgccaggatacagagatgaGTTCAATCATTTCATATTCTCCGAAGTCCGTGCTCCTTCTGTAAAGACA i nomLeu3.chr19 C 0 T 78 s macFas5.chr13 1398522 83 - 111193037 agtcattgttctggatgccgggatacagagatgaGTTAGATCGTTTCATATTCTCAGAAGTCCGTGCTCCTTCTGTAAAGACA i macFas5.chr13 T 78 T 78 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C e panTro5.chr2A 1396956 0 + 111504155 C a score=30695.000000 s hg38.chr2_KI270774v1_alt 109102 38 + 223625 TTTTTCTAGATGCTGGGATACAGAGATGAGTTTGATCA s panPan2.chr2A 1347303 38 + 114371477 TTGTTCTAGATGCCGGGATACAGAGATGAGTTTGATCA i panPan2.chr2A I 77 C 0 s gorGor5.CYUI01015607v1 1371113 38 + 1464242 TTTTTCTAGATGCTGGGATACAGAGATGAGTTTGATCA i gorGor5.CYUI01015607v1 T 467 C 0 s nomLeu3.chr19 1095357 38 + 81552678 ttgttctagatgccaggatacagagatgaGTTCAATCA i nomLeu3.chr19 T 78 C 0 s macFas5.chr13 1398527 38 - 111193037 ttgttctggatgccgggatacagagatgaGTTAGATCG i macFas5.chr13 T 78 T 80 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C e panTro5.chr2A 1396956 0 + 111504155 C a score=10069.000000 s hg38.chr2_KI270774v1_alt 109140 21 + 223625 TTTCATATCCTCAGAAGTCTA- s panPan2.chr2A 1347341 21 + 114371477 TTTCATATCCTCAGAAGTCCA- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371151 21 + 1464242 TTTCATATCCTCAGAAGTCCA- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095395 21 + 81552678 TTTCATATTCTCCGAAGTCCG- i nomLeu3.chr19 C 0 T 81 s macFas5.chr13 1398485 22 - 111193037 Tttctttccttaagaaatacta i macFas5.chr13 T 80 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C e panTro5.chr2A 1396956 0 + 111504155 C a score=5472.000000 s hg38.chr2_KI270774v1_alt 109161 14 + 223625 TGCTCCTTCTGTAA--- s panPan2.chr2A 1347362 14 + 114371477 TGCTCCTTCTGTAA--- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371172 14 + 1464242 Tgctccttctataa--- i gorGor5.CYUI01015607v1 C 0 T 234 s nomLeu3.chr19 1095335 14 + 81552678 tgtttctactgtgg--- i nomLeu3.chr19 T 81 I 3 s macFas5.chr13 1398507 15 - 111193037 --tttctactgtggaac i macFas5.chr13 C 0 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C e panTro5.chr2A 1396956 0 + 111504155 C a score=16510.000000 s hg38.chr2_KI270774v1_alt 109175 19 + 223625 AGTCATTGTTCTAGATGCC s panPan2.chr2A 1347376 19 + 114371477 AGTCGTtgttctagatgct i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1370952 19 + 1464242 agtcattgttctagatgcc i gorGor5.CYUI01015607v1 T 234 C 0 s nomLeu3.chr19 1095352 19 + 81552678 agtcattgttctagatgcc i nomLeu3.chr19 I 3 C 0 s macFas5.chr13 1398522 19 - 111193037 agtcattgttctggatgcc i macFas5.chr13 C 0 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C e panTro5.chr2A 1396956 0 + 111504155 C a score=77946.000000 s hg38.chr2_KI270774v1_alt 109194 64 + 223625 AGGATACAGAGATGAGTTCGATCATTTCATATCCTCAGAAGTCTGTGCTCCTTCCGTAAAGTCA s panTro5.chr2A 1396956 64 + 111504155 GGGATACAGAGATGCGTTAGATCATTTCATATTCTCAGAAGTCTATGCTCCTTCTGTAAAGTCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347395 64 + 114371477 gggatacagagatgagttcgatcatttcatatcctcaaAAGTCCATGCTCCTTCTGTAAAGTCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1370971 64 + 1464242 aggatacagaaatgaGTTCGATCATTTCATATCCTCAGAAGTCCGTgctccttctgtaaagtca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095371 64 + 81552678 aggatacagagatgaGTTCAATCATTTCATATTCTCCGAAGTCCGTGCTCCTTCTGTAAAGACA i nomLeu3.chr19 C 0 T 78 s macFas5.chr13 1398541 64 - 111193037 gggatacagagatgaGTTAGATCGTTTCATATTCTCAGAAGTCCGTGCTCCTTCTGTAAAGACA i macFas5.chr13 C 0 T 78 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C a score=75848.000000 s hg38.chr2_KI270774v1_alt 109258 63 + 223625 TTGTTCTAGATGCCGGGATACAGAGGTGAGTTTGATCATTTCATATACTCAGAAGTCCATGCT s panTro5.chr2A 1397020 63 + 111504155 TTGTTCTAGATGCCAGGATACAGAGATGAGTTCGATCATTTCATATCCTCAGAAGTCTGTGCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347459 63 + 114371477 TTGTTCTAGATGCCGGGATACAGAGATAAGTTAGATCATTTCATATTCTCAGAAGTCCATGCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371035 63 + 1464242 ttgttctagatgctgggatacagagatgcgttagatcacttcatatcctcagaagtctaTGCT i gorGor5.CYUI01015607v1 C 0 I 482 s nomLeu3.chr19 1095357 63 + 81552678 ttgttctagatgccaggatacagagatgaGTTCAATCATTTCATATTCTCCGAAGTCCGTGCT i nomLeu3.chr19 T 78 C 0 s macFas5.chr13 1398527 63 - 111193037 ttgttctggatgccgggatacagagatgaGTTAGATCGTTTCATATTCTCAGAAGTCCGTGCT i macFas5.chr13 T 78 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C a score=8936.000000 s hg38.chr2_KI270774v1_alt 109321 10 + 223625 CCTTCTATAA s panTro5.chr2A 1397083 10 + 111504155 CCTTCTGTAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347522 10 + 114371477 CCTTCTGTAA i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1095420 10 + 81552678 CCTTCTGTAA i nomLeu3.chr19 C 0 T 78 s macFas5.chr13 1398590 10 - 111193037 CCTTCTGTAA i macFas5.chr13 C 0 T 78 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C e gorGor5.CYUI01015607v1 1371098 482 + 1464242 I a score=5640.000000 s hg38.chr2_KI270774v1_alt 109331 6 + 223625 AGTCAT s panTro5.chr2A 1397093 6 + 111504155 AGTCAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347532 6 + 114371477 AGTCAT i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1095352 6 + 81552678 agtcat i nomLeu3.chr19 T 78 C 0 s macFas5.chr13 1398522 6 - 111193037 agtcat i macFas5.chr13 T 78 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C e gorGor5.CYUI01015607v1 1371098 482 + 1464242 I a score=1365.000000 s hg38.chr2_KI270774v1_alt 109337 1 + 223625 T s panTro5.chr2A 1397099 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347538 1 + 114371477 T i panPan2.chr2A C 0 T 312 s gorGor5.CYUI01015607v1 1371580 1 + 1464242 t i gorGor5.CYUI01015607v1 I 482 C 0 s nomLeu3.chr19 1095358 1 + 81552678 t i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1398528 1 - 111193037 t i macFas5.chr13 C 0 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C a score=69867.000000 s hg38.chr2_KI270774v1_alt 109338 57 + 223625 GTTCTAGATGCCAGGATACAGAGATGAGTTCGATCATTTCATATTCTCAGAAGTCCG s panTro5.chr2A 1397100 57 + 111504155 GTTCTAGATGCCGGGATACAGAGGTGAGTTTGATCATTTCATATACTCAGAAGTCCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347227 57 + 114371477 gttccagatgccaggatacagaGATGAGTTCCATCATTTCATATTCTCAGAAGTCCG i panPan2.chr2A T 312 C 0 s gorGor5.CYUI01015607v1 1371581 57 + 1464242 gttctacatgccaggatacagaGATGAGTTCGATCATTTCATATTCTCAGAAGTCTG i gorGor5.CYUI01015607v1 C 0 T 311 s nomLeu3.chr19 1095359 57 + 81552678 gttctagatgccaggatacagagatgaGTTCAATCATTTCATATTCTCCGAAGTCCG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1398529 57 - 111193037 gttctggatgccgggatacagagatgaGTTAGATCGTTTCATATTCTCAGAAGTCCG i macFas5.chr13 C 0 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C a score=22673.000000 s hg38.chr2_KI270774v1_alt 109395 18 + 223625 TGCTCCTTCCATAAAGTC s panTro5.chr2A 1397157 18 + 111504155 TGCTCCTTCTGTAAAGTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347284 18 + 114371477 TGCTCCTTCTGTAAAGTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371327 18 + 1464242 TGCTCCTTCTGTAAAGTC i gorGor5.CYUI01015607v1 T 311 C 0 s nomLeu3.chr19 1095416 18 + 81552678 TGCTCCTTCTGTAAAGAC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1398586 18 - 111193037 TGCTCCTTCTGTAAAGAC i macFas5.chr13 C 0 T 78 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C a score=1365.000000 s hg38.chr2_KI270774v1_alt 109413 1 + 223625 A s panTro5.chr2A 1397175 1 + 111504155 A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347302 1 + 114371477 A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371345 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095434 1 + 81552678 A i nomLeu3.chr19 C 0 T 78 s macFas5.chr13 1398526 1 - 111193037 a i macFas5.chr13 T 78 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C a score=45964.000000 s hg38.chr2_KI270774v1_alt 109414 38 + 223625 TTTTTCTAGATGCCGGGATACAGAGATGAGTTTGATCA s panTro5.chr2A 1397176 38 + 111504155 TTGTTCTAGATGCCAGGATACAGAGATGAGTTCCATCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347303 38 + 114371477 TTGTTCTAGATGCCGGGATACAGAGATGAGTTTGATCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371346 38 + 1464242 TTTTTCTAGATGCTGGGATACAGAGATGAGTTTGATCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095357 38 + 81552678 ttgttctagatgccaggatacagagatgaGTTCAATCA i nomLeu3.chr19 T 78 T 80 s macFas5.chr13 1398527 38 - 111193037 ttgttctggatgccgggatacagagatgaGTTAGATCG i macFas5.chr13 C 0 T 80 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C a score=14405.000000 s hg38.chr2_KI270774v1_alt 109452 21 + 223625 TTTCATATCCTCAGAAGTCCA s panTro5.chr2A 1397214 21 + 111504155 TTTCATATTCTCAGAAGTCCG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347341 21 + 114371477 TTTCATATCCTCAGAAGTCCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371384 21 + 1464242 TTTCATATCCTCAGAAGTCCG i gorGor5.CYUI01015607v1 C 0 I 233 s nomLeu3.chr19 1095315 20 + 81552678 Tttctttccttaagaaatac- i nomLeu3.chr19 T 80 C 0 s macFas5.chr13 1398485 20 - 111193037 Tttctttccttaagaaatac- i macFas5.chr13 T 80 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C a score=104720.000000 s hg38.chr2_KI270774v1_alt 109473 92 + 223625 TGCTCCTTCTGT---AAAGTCGTTGTTCTAGATGCCGGGATACAGAGATGAGTTCGATCATTTCATATCCTCAAAAGTCCATGCTCCTTCTGTAA s panTro5.chr2A 1397235 92 + 111504155 TGCTCCTTCCAT---AAAGTCATTTTTCTAGATGCCGGGATACAGAGATGAGTTTGATCATTTCATATCCTCAGAAGTCCATGCTCCTTCTGTAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347362 92 + 114371477 TGCTCCTTCTGT---AAAGTCGTtgttctagatgctgggatacagagatgagttcgatcatttcatatcctcaaAAGTCCATGCTCCTTCTGTAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371638 92 + 1464242 TGCTCCTCCTGT---AAAGTCATTGTTCTAGATGCCAGGATAGAGAGATGCATTAGATCATTTCATATCCTCAGAAGTCCGTGCTCCTTCTGTAA i gorGor5.CYUI01015607v1 I 233 C 0 s nomLeu3.chr19 1095335 95 + 81552678 tgtttctactgtggaacagtcattgttctagatgccaggatacagagatgaGTTCAATCATTTCATATTCTCCGAAGTCCGTGCTCCTTCTGTAA i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1398505 95 - 111193037 tatttctactgtggaacagtcattgttctggatgccgggatacagagatgaGTTAGATCGTTTCATATTCTCAGAAGTCCGTGCTCCTTCTGTAA i macFas5.chr13 C 0 T 78 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C a score=5415.000000 s hg38.chr2_KI270774v1_alt 109565 5 + 223625 AGTCA s panTro5.chr2A 1397327 5 + 111504155 AGTCG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347454 5 + 114371477 AGTCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371730 5 + 1464242 AGTCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095430 5 + 81552678 AGACA i nomLeu3.chr19 C 0 T 78 s macFas5.chr13 1398522 5 - 111193037 agtca i macFas5.chr13 T 78 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C a score=90112.000000 s hg38.chr2_KI270774v1_alt 109570 78 + 223625 TTGTTCTAGATGCCGGGATACAGAGATAAGTTAGATCATTTCATATTCTCAGAAGTCCATGCTCCTTCTGTAAAGTCA s panTro5.chr2A 1397332 78 + 111504155 TTGTTCTAGATGCTGGGATACAGAGATGAGTTCGATCATTTCATATTCTCAGAAGTCCATGCTCCTTCTGTAAAGTCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347459 78 + 114371477 TTGTTCTAGATGCCGGGATACAGAGATAAGTTAGATCATTTCATATTCTCAGAAGTCCATGCTCCTTCTGTAAAGTCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371735 73 + 1464242 TTGTTCTAGATGCCGGGATACAGAGAT-AGTTAGATCATTTCATA-TCTCAAA---TCCTGCTCCTTCTGTAAAGTCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095357 78 + 81552678 ttgttctagatgccaggatacagagatgaGTTCAATCATTTCATATTCTCCGAAGTCCGTGCTCCTTCTGTAAAGACA i nomLeu3.chr19 T 78 T 19 s macFas5.chr13 1398527 78 - 111193037 ttgttctggatgccgggatacagagatgaGTTAGATCGTTTCATATTCTCAGAAGTCCGTGCTCCTTCTGTAAAGACA i macFas5.chr13 C 0 T 19 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e rheMac8.chr13 1426207 0 + 108979918 C a score=15696.000000 s hg38.chr2_KI270774v1_alt 109648 29 + 223625 TTGTTTTAGATGCCAGGATACAGAAATGC s panTro5.chr2A 1397410 29 + 111504155 TTGTTCTAGATGCCAGGATACAGAAATGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347537 29 + 114371477 TTGTTCTAGATGCCAGGATACAGAAATGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371808 29 + 1464242 TTGTTCTAGATGCCAGGATACAGAAATGC i gorGor5.CYUI01015607v1 C 0 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221448 0 - 7082604 C e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e macFas5.chr13 1398605 19 - 111193037 T e rheMac8.chr13 1426207 0 + 108979918 C e nomLeu3.chr19 1095435 19 + 81552678 T a score=16620.000000 s hg38.chr2_KI270774v1_alt 109677 21 + 223625 ATTAGATTATTTCATATTCTG s panTro5.chr2A 1397439 21 + 111504155 ATTAGATTATTTCATATTCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347566 21 + 114371477 ATTAGATTATTTCATATTCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371837 21 + 1464242 ATTAGATTATTTCATATTCTC i gorGor5.CYUI01015607v1 C 0 C 0 s saiBol1.JH378218 1221448 21 - 7082604 atcagattattttacattctc i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e cebCap1.NW_016107827v1 1309377 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e macFas5.chr13 1398605 19 - 111193037 T e rheMac8.chr13 1426207 0 + 108979918 C e nomLeu3.chr19 1095435 19 + 81552678 T a score=1365.000000 s hg38.chr2_KI270774v1_alt 109698 1 + 223625 A s panTro5.chr2A 1397460 1 + 111504155 A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347587 1 + 114371477 A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371858 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 C 0 s saiBol1.JH378218 1221469 1 - 7082604 a i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1309377 1 + 1864846 A i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1375577 0 - 108792865 C e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e macFas5.chr13 1398605 19 - 111193037 T e rheMac8.chr13 1426207 0 + 108979918 C e nomLeu3.chr19 1095435 19 + 81552678 T a score=1911.000000 s hg38.chr2_KI270774v1_alt 109699 1 + 223625 A s panTro5.chr2A 1397461 1 + 111504155 A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347588 1 + 114371477 A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371859 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 C 0 s calJac3.chr14 1375577 1 - 108792865 a i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1221470 1 - 7082604 a i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1309378 1 + 1864846 A i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macNem1.NW_012011978v1 1427044 0 + 3644372 C e macFas5.chr13 1398605 19 - 111193037 T e rheMac8.chr13 1426207 0 + 108979918 C e nomLeu3.chr19 1095435 19 + 81552678 T a score=13741.000000 s hg38.chr2_KI270774v1_alt 109700 7 + 223625 AAGTCCA s panTro5.chr2A 1397462 7 + 111504155 AAGTCCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347589 7 + 114371477 AAGTCCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371860 7 + 1464242 AAGTCCA i gorGor5.CYUI01015607v1 C 0 C 0 s macNem1.NW_012011978v1 1427044 7 + 3644372 aagtcca i macNem1.NW_012011978v1 C 0 C 0 s calJac3.chr14 1375578 7 - 108792865 aggtccc i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1221471 7 - 7082604 aggtccc i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1309379 7 + 1864846 AGGTCCC i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 102172 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e colAng1.NW_012118821v1 1377311 0 - 13651311 C e manLeu1.NW_012103754v1 937697 0 - 2200435 C e chlSab2.chr14 1456414 0 - 107702431 C e cerAty1.NW_012000820v1 1380503 0 - 10304083 C e macFas5.chr13 1398605 19 - 111193037 T e rheMac8.chr13 1426207 0 + 108979918 C e nomLeu3.chr19 1095435 19 + 81552678 T a score=1667892.000000 s hg38.chr2_KI270774v1_alt 109707 187 + 223625 TGCTCCTTCTGTAAAGACAGACACCTGAAGAAGGCACTTCATTTAGGGATGAATTTATT--AGATCATCAGGGAACATGATGGTTTGTTGGTTGGAGAACTGACTTACTTTGAGTAAAAGTTTTAATAATAATAAAATACTTTTATCCTTCAAAACACATCTAGTTACTTTAGAGCCAAAAAG--GAAAAA s panTro5.chr2A 1397469 187 + 111504155 TGCTCCTTCTGTAAAGACAGACACCTGAAGAAGGCACTTCATTTAGGGATGAATTTATT--AGATCATCAGGAAACATGATGGTTTGTTGGTTGGAGAACTGACTTACTTTGAGTAAAAGTTTTAATAATAATAAAATACTTTTATCCTTCAAAACACATCTAGTTACTTTAGAGCCGAAAAG--GAAAAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347596 187 + 114371477 TGCTCCTTCTGTAAAGACAGACACCTGAAGAAGGCACTTCATTTAGGGATGAATTTATT--AGATCATCAGGAAACATGATGGTTTGTTGGTTGGAGAACTGACTTACTTTGAGTAAAAGTTTTAATAATAATAAAATACTTTTATCCTTCAAAACACATCTAGTTACTTTAGAGCCGAAAAG--GAAAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1371867 189 + 1464242 TGCTCCTTCTGTAAAGACAGACACCTGAAGAAGGCACTTCATTTAGGGATGAATTTATTACAGATCATCAGGAAACATGATGGTTTGTTGGTTAGAGAACTGACTGACTTTGAGTAAAAGTTTTAATAATAATAAAATACTTTTATCCTTCAAAACACATCTAGTTACTTTAGAGCTGAAAAG--GAAAAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095416 184 + 81552678 TGCTCCTTCTGTAAAGACAGACACCTGAAGAGGGCACTTCATTTAGGGATGAATTTATTACAGATCATCAGGAAACATGATGATCGGTTGGTTAGAGAACTGACTGACTTTGCGTAAAAGTTTTAATAATAATAAAATACTTTTATCTTTCAAAACACATCTAG-----TTAGAGCCGAAAAG--GAAAAA i nomLeu3.chr19 T 19 C 0 s rheMac8.chr13 1426207 187 + 108979918 TGCTCCTTCTGTAAAGACAGATACCTGAAGGGGACACCTCATTTAGGGATGAATTTATTATGGATCATCAGGAAATACAATGGTTGGTTGGTTAGAGAACTG----ACTTTGAGTAAAAGTTTTAATAATAATAAAATACTTTTATCCTTCAAAACACATCTAGTTACTTTAGAGCCGAAAAGAAAAAAAA i rheMac8.chr13 C 0 I 1 s macFas5.chr13 1398586 187 - 111193037 TGCTCCTTCTGTAAAGACAGATACCTGAAGGGGACACCTCATTTAGGGATGAATTTATTATGGATCATCAGGAAATACAATGGTTGGTTGGTTAGAGAACTG----ACTTTGAGTAAAAGTTTTAATAATAATAAAATACTTTTATCCTTCAAAACACATCTAGTTACTTTAGAGCCGAAAAGAAAAAAAA i macFas5.chr13 T 19 I 1 s macNem1.NW_012011978v1 1427051 185 + 3644372 tgctccttctgtaaagacagataCCTGAAGGGGACACCTCATTTAGGGATGAATTTATTATGGATCATCAGGAAATACAATGGTTGGTTGGTTAGAGAACTG----ACTTTGAGTAAAAGTTTTAATAATAATAAAATACTTTTATCCTTCAAAACACATCTAGTTACTTTAGAGCCGAAAAG--AAAAAA i macNem1.NW_012011978v1 C 0 I 1 s cerAty1.NW_012000820v1 1380503 185 - 10304083 tgctccttctgtaaagacagataCCTGAAGGGGGCACCTCATTTAGGGATGAATTTATTATGGATCATCAGGAAATACAATGGTTGGTTGGTTAGAGAACTG----ACTTTGAGTAAAAGTTTTAATAATAATAAGACACTTTTATCCTTCAAAACACATCTAGTTACTTTAGAGCCGAAAAG--GAAAAA i cerAty1.NW_012000820v1 C 0 I 1 s chlSab2.chr14 1456414 185 - 107702431 TGCTCCTTCTGTAAAGACAGATACCTGAAGGGGGCACCTCATTTAGGCATGAATTTATTACGGATCATCAGGAAACATGATGGTTAGTTGGTTAGAGAACTG----ACTTTGAGTAACAGTTTTAATAATAATAAGACACTTTTATCCTTCAAAACACATCTAGTTACTTTAGAGCCGAAAAG--GAAAAA i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012103754v1 937697 185 - 2200435 tgctccttctgtaaagacagataCCTGAAGGGGACACCTTATTTAGGGATTAATTTATTATGGATCATCAGGAAATACAATGGTTGGTTGGTTAGAGAACTG----ACTTTGAGTAAAAGTTTTAATAATAATAAAATACTTTTATCCTTCAAAACACATCTAGTTACTTTAGAGCCAAAAAG--GAAAAA i manLeu1.NW_012103754v1 C 0 I 1 s colAng1.NW_012118821v1 1377311 185 - 13651311 tgctccttctgtaaagacagacaCCTGAAGGGGGCAACTCATTTAGGGATGAATTTATTACGGATCCTCAGGAAACATGATGGTTGGTTGGTTAGAGAACTG----ACTTTGAGTAAAAGTTTTAATAAAAATAAAACACTTTTATCCTTCAAAACACATCTAGTTACTTTAGAGCCGAAAAG--GAAAAA i colAng1.NW_012118821v1 C 0 M 1413 s calJac3.chr14 1375585 183 - 108792865 tgcgccttctctaaagacagacacgtgagtggcacacttCATTTAGGGATGGGTTTGTTA-AGATCATCAGAAAACAGGATGGCTTG-TGGTTAGAGAACTG----GCTTTGAGTAAAAGTCTTAATAATAATAAAATACTTTTACCCTTCAAAACACATCTAGTTACTTCAGACCTAAAAAG--GAAAAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1221478 182 - 7082604 tgcccCATCAGTAAAGACAGTCACCTGAGTGGCACACTTCATTT-GAGATGGGCTTGTTACAGATCATCAGAAAACCTGATGGCTGG-TGGTCAGAGAACTG----GCTTTGAGTAAACGTTTTAACAATAATAAAATAC-TTTACCCTTCAAAACACATCTAGTTACTTTAGAGCTGAAAAG--GAAAAC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1309386 184 + 1864846 TGCCCCTTCTGTAAAGACAGACACCTGAGTGGTGCACTTCATTTAGGAATGGGTTTGTTACAGATCATCAGAAAACATGATGGCTGG-TGGTCAGAGAACTG----GCTCTGAGTAAAAGTTTTAATAATAATAAAATGCTTTTACCCTTCAAAACACATCTAGTTACTTAAGAGCTGAAAAG--GAAAAC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 102172 184 + 287728 TGCCCCTTCTGTAAAGACAGACCCCTGAGTGGTGCACTTCATTTAGGGATGGGTTTCTTACAGATCATCAGAAAACGTGATGGCTGG-TGGTTAGAGAACCG----GCTTTGAGTAAAAGTTTTAATAGTAATAAAATGCTTTTACCCTTCAAAACACATCTAGTTACTTTAGAGCTGAAAAG--GAAAAC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90004658 1569 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I a score=1295512.000000 s hg38.chr2_KI270774v1_alt 109894 191 + 223625 AAA-TAACTTTT--CTAAATAAGAATATCCAAAACTAGAGTGTGCCTAAATCATTTCTTCCACTCACTCATGGACAGTGGTATGGCCCTAGGCTTTTGGAAAGTGATAGGAAAGCACAGAGCCTGCCTACGGAAGTGTTTACGAAAAGGGAGAGTCTGAGACC--ACCCTACCCCC-TCATTCATCACTTCACTTAC s panTro5.chr2A 1397656 193 + 111504155 AAAATAACTTTT--CTAAATGATAATATCCAAAACTAGAGTGTGCCTAAATCATTTCTTCCACTCACTCATGGACAGTGGTATGGCCCTAGGCTTTTGGAAAGCGATAGGAAAGCACAGAACCTGCCTACGGAAGGGTTTACGAAAAGGGAGAGTCTGAGACC--ACCCTACCCCCCTCATTCATCACTTCACTTAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347783 192 + 114371477 AAA-TAACTTTT--CTAAAAGATAATATCCAAAACTAGAGTGTGCCTAAATCATTTCTTCCACTCACTCATGGACAGTGGTATGGCCCTAGGCTTTTGGAAAGCGATAGGAAAGCACAGAACCTGCCTACGGAAGGGTTTACGAAAAGGGAGAGTCTGAGACC--ACCCTACCCCCCTCATTCATCACTTCACTTAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1372056 186 + 1464242 ATA-TAACTTTT--CTAAATAATAGTATCCAAAGCTAGAGTGTGCCTAAGTCATTTCTTCCACTCACTCATGGACAGTGGTATGGCCCTAGGCTTTTGGAAAGTGATAGGAAAGCACAGAGCCTGCCTACAGAAGTGTTTACGAAAA-GGAGCGTCTGAGACC--ACCCTACTCCCCTCATTCA-----TCACTTAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095600 192 + 81552678 AAA-AAACTTTT--CTAAATAATAATATCCGAAGCTAGAGTGTGCCTGAGTCATTTCTTCCACTCACTTATGGATAGCAGTGTGGCCCCAGGCTTTTGGAAAGTGATAGGAAAGCACAGAGCCTGCCCACGGAAGTGTTTACGAAAAGGGAGCGTCTGAGACC--ACCCTACCTCCCTCATTCATCACTTCACTTAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1426395 190 + 108979918 AAA-TAACTTCT--CCAAATAATAATATCAGAAGCTAGAGTGTGCCTAAGTCATTTCTTCCACTCACTCATGGGCAGTGGTATGGCCCCAGGCTTTTGGAAAGTGATAGGAAAGCACAGAGCCTGCCCATGAAAGTGTTTACAAAAAGGGAGCCTCTGAGACC---CCCTACCCCC-TCACTCATCACTTCGCTTAC i rheMac8.chr13 I 1 C 0 s macFas5.chr13 1398774 190 - 111193037 AAA-TAACTTCT--CCAAATAATAATATCAGAAGCTAGAGTGTGCCTAAGTCATTTCTTCCACTCACTCATGGGCAGTGGTATGGCCCCAGGCTTTTGGAAAGTGATAGGAAAGCACAGAGCCTGCCCATGAAAGTGTTTACAAAAAGGGAGCCTCTGAGACC---CCCTACCCCC-TCACTCATCACTTCGCTTAC i macFas5.chr13 I 1 C 0 s macNem1.NW_012011978v1 1427237 190 + 3644372 AAA-TAACTTCT--CCAAATAATAATATCAGAAGCTAGAGTGTGCCTAAGTCATTTCTTCCACTCACTCATGGGCAGTGGTATGGCCCCAGGCTTTTGGAAAGTGATAGGAAAGCACAGAGCCTGCCCATGAAAGTGTTTACAAAAAGGGAGCCTCTGAGACC---CCCTACCCCC-TCACTCATCACTTCGCTTAC i macNem1.NW_012011978v1 I 1 I 25 s cerAty1.NW_012000820v1 1380689 190 - 10304083 AAA-TAACTTCT--CTAAATAATAATATCAGAAGCTAGAGTGTGCCTAAGTCATTTCTTCCACTCACTCATGGGCAGTGGTATGGCCCCAGGCTTTTGGAAAGTGATAGGAAAGCACAGAGCCCGCCCATGAAAGTGTTTACAAAAAGGGAGCCTCTGAGACC---CCCTACCCCC-TCACTCATCACTTCGCTTAC i cerAty1.NW_012000820v1 I 1 C 0 s chlSab2.chr14 1456600 188 - 107702431 AAA--AACTTCT--CTAAATAATAATATCAGGAGCTAGAGTGTGCCTGAGTCATTTCTTCCACTCACCCATGGACAGTGGTATGGCCCCGGGCTTTTGGAAAGTGATAGGAAAGCACAGAG-CTGCCCATGAAAGTGTTTACAAAAAGGGAGCCTCTGAGACT---CCTTATCCCC-TCACTCATCACTTCGCTTAC i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012103754v1 937883 190 - 2200435 AAA-TAACTTCT--CCAAATAATAATATCAGAAGCTAGAGTGTGCCTAAGTCATTTCTTCCACTCACTCATGGGCAGTGGTATGGCCCCAGGCTTTTGGAAAGTGATAGGAAAGCACAGAGCCTGCCCATGAAAGTGTTTACAAAAAGGGAGCCTCTGAGACC---CCCTACCCCC-TCACTCATCACTTCGCTTAC i manLeu1.NW_012103754v1 I 1 C 0 s calJac3.chr14 1375768 189 - 108792865 --A-AAACTTCT--CTAAATAATAACATCAGAAGCAAGAGTGTGCCCAAGTTACTTCTTCCACTCGCTCGTGGATGGCGGTGTGGCCC-GGGCGTTTGG-AAGTGATAGGAAAGCACAGAGCCTGCCCGTGAAAGTGTTTATGAAAAAGGAGCATCTGAGACTCCACACTTCGCCC-TCACGCATCCCTGCACTCAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1221660 160 - 7082604 --A-AAACTTTT--CTAAATAATAATATCGGAAGCGAGAGTGTGCCGAAGTTACTTCTTCCACTCGCTTGTGGACGGCGGTGTGGCCC-GGGCGTTTGGAAAGTGGTA-AAAAGCACAGAGCCTGCCCGTGAAGGTGCTTGTGAAAAAGGAGCGTCTGAGACTCCAC------------------------------ i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1309570 190 + 1864846 --A-AAACTTTT--CTAAATAATAATATCGGAAGCGAGAGAGTGCCGAAGTTACTTCTTCCACTCGCTGGTGGACGGTGGTGTGGCCC-GGGCGTTTGGAAAGTGATATGAAAGCACAGAGCCTGCCTGTGAAAGTGCTCATGAAAAAGGAGCATCTGAGACTCCACCCTTCGCCC-TCAGGCATCGCTTCACTTAC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 102356 160 + 287728 --A-GAACTCTTCCCTAAATAATAATATCGGAAGCGAGAGTGTGCCGAAGTTCCCTCTTCCACGGGCTCGCGGACGGCGGTGTGGCCC-GGGCGTTTGG--------------------------------AAAGTGTTTATGAAAAAGGAGCGCCTGAGACTCCACCCTTCGCCC-TCACGCATCACGTCACTTAC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90004658 1569 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e colAng1.NW_012118821v1 1377496 1413 - 13651311 M a score=32968.000000 s hg38.chr2_KI270774v1_alt 110085 5 + 223625 CTGGG s panTro5.chr2A 1397849 5 + 111504155 CTGGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347975 5 + 114371477 CTGGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1372242 5 + 1464242 CTGGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095792 5 + 81552678 CTGGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1426585 5 + 108979918 CTGGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1398964 5 - 111193037 CTGGA i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1380879 5 - 10304083 CTGGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1456788 5 - 107702431 CTGGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 938073 5 - 2200435 CTGGA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1375957 5 - 108792865 CTGGG i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1309760 5 + 1864846 CTGGG i cebCap1.NW_016107827v1 C 0 I 11 s aotNan1.NW_018513311v1 102516 5 + 287728 CTGGG i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221820 0 - 7082604 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e colAng1.NW_012118821v1 1377496 1413 - 13651311 M e macNem1.NW_012011978v1 1427427 25 + 3644372 I a score=68568.000000 s hg38.chr2_KI270774v1_alt 110090 14 + 223625 TAGCATGgggccag s panTro5.chr2A 1397854 14 + 111504155 TAGCATAgggccag i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347980 14 + 114371477 TAGCATGgggccag i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1372247 14 + 1464242 TAGCATGgggccag i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095797 14 + 81552678 TAGCATGgggccag i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1426590 14 + 108979918 TAGCACGGGGCCAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1398969 14 - 111193037 TAGCACGGGGCCAG i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1380884 14 - 10304083 TAGCACGGGGCCAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1456793 14 - 107702431 TAGCACGgggccag i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 938078 14 - 2200435 TAGCACGgggccag i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1375962 13 - 108792865 TAGCG-AGGGTTGG i calJac3.chr14 C 0 C 0 s aotNan1.NW_018513311v1 102521 14 + 287728 TAGCGTGGGGTCGG i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221820 0 - 7082604 C e cebCap1.NW_016107827v1 1309765 11 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e colAng1.NW_012118821v1 1377496 1413 - 13651311 M e macNem1.NW_012011978v1 1427427 25 + 3644372 I a score=29456.000000 s hg38.chr2_KI270774v1_alt 110104 8 + 223625 ggacaaag s panTro5.chr2A 1397868 8 + 111504155 ggacaaag i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1347994 8 + 114371477 ggacaaag i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1372261 7 + 1464242 ggacaaa- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095811 7 + 81552678 ggacaaa- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1426604 7 + 108979918 GGACAAA- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1398983 7 - 111193037 GGACAAA- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1427452 8 + 3644372 GGACAAAT i macNem1.NW_012011978v1 I 25 C 0 s cerAty1.NW_012000820v1 1380898 7 - 10304083 GGACAAA- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1456807 7 - 107702431 ggacaaa- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 938092 7 - 2200435 ggacaaa- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1375975 7 - 108792865 GGGCGGA- i calJac3.chr14 C 0 C 0 s aotNan1.NW_018513311v1 102535 7 + 287728 GGACGGA- i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221820 0 - 7082604 C e cebCap1.NW_016107827v1 1309765 11 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e colAng1.NW_012118821v1 1377496 1413 - 13651311 M a score=856287.000000 s hg38.chr2_KI270774v1_alt 110112 120 + 223625 ggactttgctcccaaggta-gatggggccagag-ttttagtgtttacgctca-ttccctgaga-ccagctcccatagagc-aatggaaaggagaccagggcaggctgcacacagaaggggccaca s panTro5.chr2A 1397876 120 + 111504155 ggactttgctcccaaggta-gatggggccagag-ttttagtgtttacgctca-ttccctgaga-ccagctcccatagagc-aatggaaaggagaccagggcaggctgcacacagaaggggccaca i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1348002 120 + 114371477 ggactttgctcccaaggtt-gatggggccagag-ttttagtgtttacgctca-ttccctgaga-ccagctcccatagagc-aatggaaaggagaccagggcaggctgcacacagaaggggccaca i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1372268 120 + 1464242 ggactttgctcccaaggta-gatggggccagag-ttttagtgtttgcactca-ttccctgaga-ccagctcccatagagc-aaaggaaaggagaccagggcaggctgcacacaggaggggccgca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095818 120 + 81552678 ggactttgctcccaaggca-gatggggccagag-ttttagtgtttgcactca-ttccctgaga-ccagctcccatagagc-aatggaaaggagaccagggcaggctgcacacaggaggggctgcg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1426611 120 + 108979918 GGACTTTGCTCCCGAGGTA-GATGGAGTCAGAG-TTTTAGTGTTTGCACTTG-TTCCCTGAGA-CCACCTCCCACAGAGC-AATGGAAAGGAGACCAGGGCAGGCTGCACACAGGAGGGGCTGCG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1398990 120 - 111193037 GGACTTTGCTCCCGAGGTA-GATGGAGTCAGAG-TTTTAGTGTTTGCACTTG-TTCCCTGAGA-CCACCTCCCACAGAGC-AATGGAAAGGAGACCAGGGCAGGCTGCACACAGGAGGGGCTGCG i macFas5.chr13 C 0 I 192 s macNem1.NW_012011978v1 1427460 125 + 3644372 AGACTTTGCTCCCGAGGTATGATGGAGTCAGAGTTTTTAGTGTTTGCACTGGATTCCCTGAGACCCACCTCCCACAGAGCAAATGGAAAGGAGATCAGGGCAGGCTGCACACAGGAGGGGCTGCG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1380905 105 - 10304083 GTACTTTGCTCCCGAGGTA-GATGGAGTCAGAG-TTTTAGTGTTTGCACTCG-----------------TCCCACAGAGC-AATGGAAAGGAGACCAGGGCAGGCTGCACACAGGAGGGGCTGCG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1456814 120 - 107702431 ggacttcgctcccaaggta-gatggagccagag-ttttagtgtttgcactcg-ttccctgaga-ccagctcccacagagc-aatggaaaggagaccagggcaggctgcacacaggagggtctgcg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 938099 120 - 2200435 ggactttgctcccgaggta-gatggagtcagag-ttttagtgtttgcacttg-ttccctgaga-ccagctcccacagagc-aatggaaaggagaccagggcaggctgcacacaggaggggctgcg i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1375982 106 - 108792865 GGACTTTGCTCCCAAGGTA-GATGCAGCCAGAG-TTTTAGTGTTTGTCCTCA-TTCCCTGAGA-CCAGCTCCCACAGAGC-AGTGGGAAGGAGACCAGGACAGACTGCACA-------------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1221820 92 - 7082604 --------------CGTTA-GATGCAGTCAGAG-TTTTAGTGTTCATCCTCA-TTCCCTGAGA-CCAGCTCCCGTGGAGC-AATGGAGGGGAGACCAGGACAGGCTGCGCA-------------- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1309776 106 + 1864846 GGACTTTGCTCCCAAAGTA-GATGCAGGCAGAG-TTTGAGTGTCTGTCCTCA-TTCCCTGAGA-CCAGCTCCTGCAGAGC-AACGGGAAGGAGACCAGGACAGGCTGCACA-------------- i cebCap1.NW_016107827v1 I 11 C 0 s aotNan1.NW_018513311v1 102542 106 + 287728 GGACTTTGCTCCCAAGGTA-GATGCAGCCAGAG-TTTTAGTGTTTGTCCTCA-TTCCCTGAGA-CCAGCTCCCATAGAGC-AATGGGAAGGAGACCAGGACAGGCTGCTCA-------------- i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90004658 1569 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e colAng1.NW_012118821v1 1377496 1413 - 13651311 M a score=62750.000000 s hg38.chr2_KI270774v1_alt 110232 9 + 223625 tctggggag s panTro5.chr2A 1397996 9 + 111504155 tctggggag i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1348122 9 + 114371477 tctggggag i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1372388 9 + 1464242 tctggggag i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095938 9 + 81552678 tctggggag i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1426731 9 + 108979918 TCTGGGGGG i rheMac8.chr13 C 0 I 195 s macFas5.chr13 1399302 9 - 111193037 TCTGGGGAA i macFas5.chr13 I 192 C 0 s macNem1.NW_012011978v1 1427585 9 + 3644372 TCTGGGGGG i macNem1.NW_012011978v1 C 0 I 190 s cerAty1.NW_012000820v1 1381010 9 - 10304083 TCTGAGGAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1456934 9 - 107702431 tctgaggag i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 938219 9 - 2200435 tctgaggag i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1376088 8 - 108792865 -CTGGTGAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1221912 8 - 7082604 -CTGGTGAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1309882 8 + 1864846 -CTGGGGAG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 102648 8 + 287728 -CTGGTGAC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90004658 1569 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e colAng1.NW_012118821v1 1377496 1413 - 13651311 M a score=42000.000000 s hg38.chr2_KI270774v1_alt 110241 4 + 223625 gggg s panTro5.chr2A 1398005 4 + 111504155 gggg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1348131 4 + 114371477 gggg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1372397 4 + 1464242 gggg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095947 4 + 81552678 gggg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1426935 4 + 108979918 GGGG i rheMac8.chr13 I 195 C 0 s macFas5.chr13 1399311 4 - 111193037 GGGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1427784 4 + 3644372 GGGG i macNem1.NW_012011978v1 I 190 C 0 s cerAty1.NW_012000820v1 1381019 4 - 10304083 GGGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1456943 4 - 107702431 gggg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 938228 4 - 2200435 gggg i manLeu1.NW_012103754v1 C 0 I 277 s calJac3.chr14 1376096 4 - 108792865 GGGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1221920 4 - 7082604 GGGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1309890 4 + 1864846 GGGG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 102656 4 + 287728 GGGG i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90004658 1569 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e colAng1.NW_012118821v1 1377496 1413 - 13651311 M a score=2552.000000 s hg38.chr2_KI270774v1_alt 110245 1 + 223625 a s panTro5.chr2A 1398009 1 + 111504155 g i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1348135 1 + 114371477 g i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1095951 1 + 81552678 g i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1426939 1 + 108979918 G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1399315 1 - 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1427788 1 + 3644372 G i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1381023 1 - 10304083 G i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1456947 1 - 107702431 g i chlSab2.chr14 C 0 C 0 e aotNan1.NW_018513311v1 102660 0 + 287728 C e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1221924 0 - 7082604 C e cebCap1.NW_016107827v1 1309894 0 + 1864846 C e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e calJac3.chr14 1376100 0 - 108792865 C e colAng1.NW_012118821v1 1377496 1413 - 13651311 M e manLeu1.NW_012103754v1 938232 277 - 2200435 I e gorGor5.CYUI01015607v1 1372401 0 + 1464242 C a score=866750.000000 s hg38.chr2_KI270774v1_alt 110246 111 + 223625 ccctgtgcctggggacccagatctttatgatgtgcagtgagct---------------------------------------------------------------------tgccggcccA-GGCTCTGGGGAAGAGCATCCCTGTTT-GACTGGAGA-----------GTGCAGTGTGTTCTGAAGGAAGA s panTro5.chr2A 1398010 111 + 111504155 ccctgtgcctggggacccagatctttacgatgtgcagtgagca---------------------------------------------------------------------tgccggcccA-GGCTCTGGGGAAGAGCATCCCTGTTT-GACTGGAGA-----------GTGCAGTGTGTTCTGAAGGAAGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1348136 111 + 114371477 ccctgtgcctggggacccagatctttacgatgtgcagtgagca---------------------------------------------------------------------tgccggcccA-GGCTCTGGGGAAGAGCATCCCTGTTT-GACTGGAGA-----------GTGCAGTGTGTTCTGAAGGAAGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1372401 111 + 1464242 ccctgcgcctggggacccagatctttacgacgtgcagtgagca---------------------------------------------------------------------tgccggccca-ggctctagggaagaGCATCCCTGTTT-GACTGGGGA-----------GTGCAGTGTGTCCTGAAGGAAGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1095952 111 + 81552678 ccctgtgcctggggacccagatctttacgatgtgcagtgagca---------------------------------------------------------------------cgccggcccA-GGCTCTGGGGAAGAGCATCCCTGTTT-GACTGGAGA-----------GTGCAGTGTGTTCTGGAGGAAGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1426940 122 + 108979918 CCCTGTGCCTGGGGACCCGGATCTTTATGCTGTGCGGTGAGCA---------------------------------------------------------------------TGCCCGCCCA-GACTCTGGGGAAGAGCACCCCTGTTT-GACTGGAGAATCTGGAGAATGTGCAGTGTATTCTGGAGGAAGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1399316 122 - 111193037 CCCTGTGCCTGGGGACCCGGATCTTTATGCTGTGCGGTGAGCA---------------------------------------------------------------------TGCCCGCCCA-GACTCTGGGGAAGAGCACCCCTGTTT-GACTGGAGAATCTGGAGAATGTGCAGTGTATTCTGGAGGAAGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1427789 124 + 3644372 CCCTGTGCCTGGGACCCCGGATCTTTATGCTGTGC-GTGAGCA--------------------------------------------------------------------GTGCCCGCCCAGGACTCTGGGGAAGAGCACCCCTGTTTGGACTGGAGAATCTGGAGAATGTGCAGTGTATTCTGGAGGAAGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1381024 191 - 10304083 CCCTGTGCCTGGGGACCCAGATCTTTACGCTGTGCGGTGAGCGTGCCCACCCGGGCTCTGGGGAAGGGGGCCCTGTGCCTGGGGACCCGGATCTTTATGCTGTGCGATGACGTGCCCGCCCG-GGCTCTGGGGAAGAGCACCCCTGTTT-GACTGGAGAATCTGGAGAACGTGCAGTGTATTCTGGAGGAAGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1456948 122 - 107702431 ccctgtgcctggggacccagatctttccgctgtgcggtgagcg---------------------------------------------------------------------tgctggcccG-GGCTCTGGGGAAGAGCACCCTTGTTT-GACTGGAGAATCTGGAGAATGTGCAGTGTATTCTGGAGGAAGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 938509 122 - 2200435 CCCTGTGCCTGGGGACCCAGATCTTTATGCTGTGCGGTGAGCG---------------------------------------------------------------------TGCCCGCCCA-GACTCTGGGGAAGAGCACCCCTGTTT-GACTGGAGAATCTGGAGAACGTGCAGTGTATTCTGGAGGAAGA i manLeu1.NW_012103754v1 I 277 C 0 s calJac3.chr14 1376100 111 - 108792865 CCCTGTACCTGGGGACCCGGATCTTCACCATGTGCAGTGAGCA---------------------------------------------------------------------TGCTGGCCCA-GGCTCTGGGGAACAGCACCCCTGTTT-GATGCGAGA-----------GTGCAGTATGTTCTGGAGCAAGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1221924 113 - 7082604 CCCTGCACCTGGGGACCCGGATCTTTACGATGTGCGGTGAGCA---------------------------------------------------------------------TGCTGGCCCA-GACTCTGGGGAACAGCATCCCTGTTT-GATGGGAGAGT---------GTGCAGTATGTTCTGGAGAAAGA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1309894 113 + 1864846 CCCTGTACCTGGGGTCCCGGATCTTTATAATGTGCAGTGAGCA---------------------------------------------------------------------TGCTGGCCCA-GGCTCTGGGGAACAGCATCCCTGTTT-GACGGGAGAGT---------GTGCAGCATGTTCTGGAGGAAGA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 102660 113 + 287728 GCCTGTACCTGGGGACCCGGATCTTTACAACGTGCAGTGAGCA---------------------------------------------------------------------CGCCGGCCCA-GGCTCTGGGGAAGAGCATCCCTGTTT-GACGGGAGAGT---------GTGCAGTACGTTCTGGAGGAAGA i aotNan1.NW_018513311v1 C 0 I 3 e mm10.chr12 90004658 1569 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e colAng1.NW_012118821v1 1377496 1413 - 13651311 M a score=1183727.000000 s hg38.chr2_KI270774v1_alt 110357 185 + 223625 TATGATGTC-CAGGGAGGCAGGGG---AGGGTTCTGGGGCCT-GCG-GCCCAGGCTGCA-TCAGCAACCAGGTTCACCTGCAGCAGCCAGACCCTGTGAGGGAGGCAGG---------------------CATTGTGTCTGGGCCACCTGGCCAGGTGTGGCTGGTAGTGAGTGG---------------CCCCATGAGTGTGTG---GGGGTGAGGGTGAGTGTGCCCTT s panTro5.chr2A 1398121 188 + 111504155 TATGATGTC-CAGGGAGGCAGGGGGGGAGGGTTCTGGGGCCT-GCG-GCCCAGGCTGCA-TCAGCAACCAGGTTCACCTGCAGCAGCCAGACCCTGTGAGGGAGGCAGG---------------------CATTGTGTCTGGGCCACCTGGCCAGGTGTGGCTGGTAGTGAGTGG---------------CCCCATGAGTGTGTG---GGGGTGAGGGTGAGTGTGCCCTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1348247 188 + 114371477 TATGATGTC-CAGGGAGGCAGAGGGGGAGGGTTCTGGGGCCT-GCG-GCCCAGGCTGCA-TCAGCAACCAGGTTCACCTGCAGCAGCCAGACCCTGTGAGGGAGGCAGG---------------------CATTGTGTCTGGGCCACCTGGCCAGGTGTGGCTGGTAGTGAGTGG---------------CCCCATGAGTGTGTG---GGGGTGAGGGTGAGTGTGCCCTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1372512 174 + 1464242 TATGACATC-CAGGGA-GCAGGGG---AGGGTTCTGGGGCCT-GTG----------GCA-CCAGCAACCAGGTTCATCTGCAGCAGCCAGACCCTGTGAGGGAGGCAGG---------------------CATTGTGTCTGGGCCACCTGGCCAGGTGTGGCTGGTAGTGAGTGG---------------CCCCATGAGTGTGT----GGGGTGAGGGTGAGTGTGCCCTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1096063 209 + 81552678 TACGAACTC-CAGGGAGGCAGGGG---AGGGTTCCGGGGCCT-GTG-GCCCAGGCTGCA-CCAGCAACCGGGTTCACCTGCAGCAGCTAGAGCCTGTGAGGGAAGCAGGCAGGGGCAGGATCTGCCCATCCATTGTGTCTGGGCCACCTGGCCAGGTGGGGCTGGTAGTCAGTGG---------------CCCCATGAGTGTGTGTGTGGGGGGGCGGTGAGTGTGCCCTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1427062 221 + 108979918 TACAACCTC-CAGGGAGGCAGCGG---CGGGTTCCCGGGCCT-GTG-GCCCAGGCTGCA-TCAGCAACCAGGTTCACCTGCAGCAGCCAGACCCTGTGAAGGAGGCAGGCAGGGGCAGGATCTGCCCATCCATTGTGTCTGGGCCACCTGGCCAggtgtggctggtagtgtgggggcaggggtgagtgtgacccatgagtgtgtg---ggggtgggggtgagtgtgCCCTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1399438 221 - 111193037 TACAACCTC-CAGGGAGGCAGCGG---CGGGTTCCCGGGCCT-GTG-GCCCAGGCTGCA-TCAGCAACCAGGTTCACCTGCAGCAGCCAGACCCTGTGAAGGAGGCAGGCAGGGGCAGGATCTGCCCATCCATTGTGTCTGGGCCACCTGGCCAGGTGTGGCTGGTAGTGTGGGGGCAGGGGTGAGTGTGACCCATGAGTGTGTG---GGGGTGGGGGTGAGTGTGCCCTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1427913 224 + 3644372 TACAACCTCTCAGGGAGGCAGCGG---C-GGTTCCCGGGCCTGGTGTGCCCAGGCTGCACTCAGCAACCAGGTTCACCTGCAGCAGCCAGACCCTGTGAAGGAGGCAGGCAGGGGCAGGATCTGCCCATCCATTGTGTCTGGGCCACCTGGCCAggtgtggctggtagtgtgggggcaggggtgagtgtgacccatgagtgtgtg---ggggtgggggtgagtgtgCCCTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1381215 221 - 10304083 TACAACCTC-CAGGGAGGCAGCGG---CGGGTTCCCGGGCCT-GTG-GCCCAGGCTGCA-TCAGCAACCAGGTTCACCTGCAGCAGCCAGACCCTGTGAGGGAGGCAGGCAGGGGCAGGATCTGCCCATCCATTGTGTCTGGGCCACCTGGCCAggtgtggctggtagtgtgggggcaggggtgagtgtgccccatgagtgtgtg---ggggtgggggtgagtgtgCCCTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1457070 188 - 107702431 TACAACCTC-CAGGGAGGCAGCGG---AGGGTTCCGGGGCCT-GTG-GCCCAGGCTGCA-TCAGCAACCAGGTTCATCTGCAGCAGCCAGACCCTGTGAGGGAGGCAGGCAGGGGCAGGATCTGCCCATCCATTGTGTCTGGGCCACCTGGCCAGGTGTGGCTGGTAGTGTGGGGGCA------------------------------------GGGGTGAGTGTGCCCTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 938631 221 - 2200435 TACAACCTC-CAGGGAGGCAGCGG---CGGGTTCCCGGGCCT-GTG-GCCCAGGCTGCA-TCAGCAACCAGGTTCACCTGCAGCAGCCAGAGCCTGTGAGGGAGGGAGGCAGGGGCAGGATCTGCCCATCCATTTTGTCTGGGCCACCTGGCCAggtgtggctggtagtgtgggggcaggggtgagtgtgccccatgagtgtgtg---ggggtgggggtgagtgtgCCCTC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1376211 149 - 108792865 TAGGACCTC-CAGGAAGGCAGGGG---ATGGTCC-------------------------------------------------CAGC-----------AGGGCAGCAGGCAGGGGCAGGATCTGCCCATCCACTGTGCCTGGGCCACCTGGCCAGGTACGGCTGGTAGTGAGTGG---------------CCCCATGAGTGTGTG---GGGGTGGGGATGAGTGTGGCCTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1222037 206 - 7082604 TACGACCTC-CGGGAAGGCAGGGA---AGGGTTCTGGGGCCT-GTG-GTCCATGCTGCA-CCAGCAGCCAGGTTCACCTGCAGCAGCCAGACCCTGCAAGGACAGCAGGCAGGGGCAGGACCTGCCCATCCATTGTGTCTGGGCCACCTGGCCAGGTACGGCTGCCAGTGAGTGG---------------CCCCATGAGTGTGTA---GGGGTGGGAATGAGCATGGCCTT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1310007 206 + 1864846 TACCGCCTC-CAGGAAGGCAGGGG---AGGGTTCCGGGGCCT-GTG-GCCCATGCTGCA-CCGGCAGCCAGGTTCACCTGCAGCAGCAAGACCCTGCAAGGGCAGCAGGCAGGGGTAGGACCTGCCCATCCATTGTGTCTGGGCCACCTGGCCAGGTATGGCTGCTAGTGAGTGG---------------CCCCATGAGTGTGTG---GCGGTGGGAATGAGCATGGCCTT i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 102773 3 + 287728 I e mm10.chr12 90004658 1569 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e colAng1.NW_012118821v1 1377496 1413 - 13651311 M a score=573023.000000 s hg38.chr2_KI270774v1_alt 110542 65 + 223625 GACCTGGCAGGCACCCCTCGGACAGGGCAGTGTGCTTTTCTCCCACCATGGCAAAGAGCGGGCAC s panTro5.chr2A 1398309 65 + 111504155 GACCTGGCAGGCACCCCTCGGACAGGGCAGTGTGCTTTTCTCCCACCATGGCAAAGAGCAGGCAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1348435 65 + 114371477 GACCTGGCAGGCACCCCTCGGACAGGGCAGTGTGCTTTTCTCCCACCATGGCAAAGAGCGGGCAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1372686 65 + 1464242 GACCTGGCAGGCACCCCTCGGACAGGGCAGTGTGCTTTTCTCCCACCATGGCAAAGAGCAGGCAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1096272 65 + 81552678 GACCTGGCAGGCACCCCTCGGACAGGGCAGTGTGCTTTTCTCCCACCATGGCAAAGAGCAGGCAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1427283 65 + 108979918 GACCTGGCAGGCACCCCTTGGACAGGGCAGTGTGCTTTTCTCCCACCATGGCAGAGAGCAGGCAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1399659 65 - 111193037 GACCTGGCAGGCACCCCTTGGACAGGGCAGTGTGCTTTTCTCCCACCATGGCAGAGAGCAGGCAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1428137 65 + 3644372 GACCTGGCAGGCACCCCTTGGACAGGGCAGTGTGCTTTTCTCCCACCATGGCAGAGAGCAGGCAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1381436 65 - 10304083 GACCTGGCAGGCACCCCTTGGACAGGGGAGTGTGCTTTTCTCCCACCATGGCAGAGAGCGGGCAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1457258 65 - 107702431 GACCTGGCAGGCACCCCTTGGACAGGGCAGTGTGCTTTTCTCCCACCATGGCAGAGAGCGGGCAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 938852 65 - 2200435 GACCTGGCAGGCGCCCCTTGGACAGGGGAGTGTGCTTTTCTCCCACCATGGCAGAGAGCAGGCAC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1376360 65 - 108792865 GACCTGGCAGGCACCCCTCGGACAGGGCAATGTGCATCGATCCCACGGTGGCGGAGAGCGGGCAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1222243 65 - 7082604 GACCTGGCAGGTGCCCCTCGGATAGGGCAATGTGCATTGATCCCACCGTGGCAGAGAGCGGGCAC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1310213 65 + 1864846 GACCTGGCAGGTGCCCCTAGGACAGGGCAATGTGCATTGATCCCACCATGGCAGAGAGTGGGCAC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 102776 65 + 287728 GACCTGGCAGGCACCCCTCGGACAGGGCAATGTGCATTGATCCCACCGTGGCAGAGAGCGGCCAC i aotNan1.NW_018513311v1 I 3 C 0 e mm10.chr12 90004658 1569 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1694265 3591 + 4416731 I e colAng1.NW_012118821v1 1377496 1413 - 13651311 M a score=32955.000000 s hg38.chr2_KI270774v1_alt 110607 3 + 223625 TGC s panTro5.chr2A 1398374 3 + 111504155 TGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1348500 3 + 114371477 TGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1372751 3 + 1464242 TGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1096337 3 + 81552678 TGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1427348 3 + 108979918 TGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1399724 3 - 111193037 TGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1428202 3 + 3644372 TGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1381501 3 - 10304083 TGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1457323 3 - 107702431 TGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 938917 3 - 2200435 TGC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1376425 3 - 108792865 TGC i calJac3.chr14 C 0 I 213 s saiBol1.JH378218 1222308 3 - 7082604 TGC i saiBol1.JH378218 C 0 I 224 s cebCap1.NW_016107827v1 1310278 3 + 1864846 TGC i cebCap1.NW_016107827v1 C 0 I 222 s aotNan1.NW_018513311v1 102841 3 + 287728 TGC i aotNan1.NW_018513311v1 C 0 I 289 s dasNov3.JH576208 1697856 3 + 4416731 TGC i dasNov3.JH576208 I 3591 C 0 e mm10.chr12 90004658 1569 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e colAng1.NW_012118821v1 1377496 1413 - 13651311 M a score=118826.000000 s hg38.chr2_KI270774v1_alt 110610 25 + 223625 AGATCTGCTCCCTCCACCTGCCGTG s panTro5.chr2A 1398377 25 + 111504155 AGATCTGCTCCCTCCACCTGCCGTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1348503 25 + 114371477 AGATCTGCTCCCTCCACCTGCCGTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1372754 25 + 1464242 AGATCTGCTCCCTCCACCTGCCGTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1096340 25 + 81552678 AGATCTACCCCCTCCACCTGCCGTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1427351 25 + 108979918 AGTTCTGCCCCCTCCACCTGCCATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1399727 25 - 111193037 AGATCTGCCCCCTCCACCTGCCATG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1428205 25 + 3644372 AGATCTGCCCCCTCCACCTGCCATG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1381504 25 - 10304083 AGATCTGCCCCCTCCACCTGCCATG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1457326 25 - 107702431 AGATTTGCCCCCTCCACCTGCCATG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 938920 25 - 2200435 AGATCTGCCCCCTCCACCTGCCATG i manLeu1.NW_012103754v1 C 0 C 0 s dasNov3.JH576208 1697859 12 + 4416731 GAATTTGCCCCC------------- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 102844 289 + 287728 I e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1222311 224 - 7082604 I e cebCap1.NW_016107827v1 1310281 222 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e calJac3.chr14 1376428 213 - 108792865 I e colAng1.NW_012118821v1 1377496 1413 - 13651311 M a score=20532.000000 s hg38.chr2_KI270774v1_alt 110635 3 + 223625 AGA s panTro5.chr2A 1398402 3 + 111504155 AGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1348528 3 + 114371477 AGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1372779 3 + 1464242 AGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1096365 3 + 81552678 AGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1427376 3 + 108979918 AGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1399752 3 - 111193037 AGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1428230 3 + 3644372 AGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1381529 3 - 10304083 AGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1457351 3 - 107702431 AGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 938945 3 - 2200435 AGA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1376641 3 - 108792865 AGG i calJac3.chr14 I 213 C 0 s dasNov3.JH576208 1697871 3 + 4416731 AGA i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 102844 289 + 287728 I e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1222311 224 - 7082604 I e cebCap1.NW_016107827v1 1310281 222 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e colAng1.NW_012118821v1 1377496 1413 - 13651311 M a score=9100.000000 s hg38.chr2_KI270774v1_alt 110638 1 + 223625 G s panTro5.chr2A 1398405 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1348531 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1372782 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1096368 1 + 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1427379 1 + 108979918 G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1399755 1 - 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1428233 1 + 3644372 G i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1381532 1 - 10304083 G i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1457354 1 - 107702431 G i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 938948 1 - 2200435 G i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1376644 1 - 108792865 G i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1310503 1 + 1864846 G i cebCap1.NW_016107827v1 I 222 C 0 s dasNov3.JH576208 1697874 1 + 4416731 G i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 102844 289 + 287728 I e mm10.chr12 90004658 1569 - 120129022 I e saiBol1.JH378218 1222311 224 - 7082604 I e otoGar3.GL873658 934202 1873 + 5252280 I e colAng1.NW_012118821v1 1377496 1413 - 13651311 M a score=461805.000000 s hg38.chr2_KI270774v1_alt 110639 68 + 223625 ----TGG---GAGCAACTGTCTCCCTTTCTCCGCTTCATAATTTTATAATTTCGGCATGGACAGAAGAAGCGTCT s panTro5.chr2A 1398406 68 + 111504155 ----TGG---GAGCAACTGTCTCCCTTTCTCCGCTTCGTAATTTTATAATTTCGGCATGGACAGAAGAAGCGTCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1348532 68 + 114371477 ----TGG---GAGCAACTGTCTCCCTTTCTCCGCTTCGTAATTTTATAATTTCGGCATGGACAGAAGAAGCGTCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1372783 68 + 1464242 ----TGG---GAGCAACTGTCTCCCTTTCTCTGCTTCGTAATTTTATAATTTCAGCATGGACAGAAGAAGCATCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1096369 68 + 81552678 ----TGG---GAGCAACTATCTCCCTTTCTCTCCTTCGTAATTTTATAATTTCAGCATGGACAGAAGAAGCATCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1427380 68 + 108979918 ----TGG---GAGCAACTCCCTTCCTTTCTGCACTTCGTAATTTTATAATTTCGGCATAGATGGAAGAAGTGTCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1399756 68 - 111193037 ----TGG---GAGCAACTCCCTTCCTTTCTGCACTTCGTAATTTTATAATTTCGGCATAGATGGAAGAAGTGTCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1428234 68 + 3644372 ----TGG---GAGCAACTCCCTTCCTTTCTGCACTTCGTAATTTTATAATTTCGGCATAGATGGAAGAAGTGTCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1381533 68 - 10304083 ----TGG---GAGCAACTCCCTTCCTTTCTGCACTTCGTAATTTTATAATTTCGGCATAGATGGAAGAAGTGTCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1457355 68 - 107702431 ----TGG---GAGCAACTCCCTTCCTTTCTCCACTTCGTAATTTCATAATTTTGGCATAGATAGAAGAAGTGTCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 938949 68 - 2200435 ----TGG---GAGTAACTCCCTTCCTTTCTGCACTTCGTAATTTTATAATTTCGGCATAGATGGAAGAAGTGTCT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1376645 68 - 108792865 ----TGG---GAGCAACTCCCTCCCTTTCTCCCCTTCCTAATTGTATAATTTTGGCTAGGACAGAAGAAGCATTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1222535 68 - 7082604 ----TGG---GAGCCACTCCCTCCCTTTCTCCCCTTCCTAATTGTACAGCTGTGGCGAGGACAGAAGAAGCATTT i saiBol1.JH378218 I 224 C 0 s cebCap1.NW_016107827v1 1310504 68 + 1864846 ----TGG---GAGCAACTCCCTCCCTTTCTCCCCTTCCTAATTGTATAATTTTGGCAAGGGCAGAAGAAGCATTT i cebCap1.NW_016107827v1 C 0 C 0 s dasNov3.JH576208 1697875 65 + 4416731 TAGGTGGCCAGAGTCATTTCCCTCCCTTCTTTGCCTCAAAATTTC----------CATATTGAATGGAGGCTTTT i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 102844 289 + 287728 I e mm10.chr12 90004658 1569 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e colAng1.NW_012118821v1 1377496 1413 - 13651311 M a score=625838.000000 s hg38.chr2_KI270774v1_alt 110707 88 + 223625 GCAT-GAGGAGGCTGTGGGTCC-GGGAGACCAGAGGCCG-AGGAACCAAATGCTCCCATCAGTCTCAGTTGCTCACCCCATGA---------------TCTGTCTG---- s panTro5.chr2A 1398474 88 + 111504155 GCAT-GAGGAGGCTGTGGGTCC-GGGAGACCAGAGGCCG-AGGAACCAAATGCTCCCATCAGTCTCAGTTGCTCACCCCATGG---------------TCTGTCTG---- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1348600 85 + 114371477 GCAT-GAGGAGGCTGTGGGTCC-GGGAGACCAGAGGCCG-AGGAACCAAATGCTCCCATCAGTCTCAGTTGCTCACCCCATGG---------------TCTGT------- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1372851 88 + 1464242 GCAT-GAGGAGGCTGTGGGTCC-AGGAGACCAGAGGCCG-AGGAACCAAATGCTCCCATTAGTCTCAGTTGCTCACCCCATGG---------------TCTGCCTG---- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1096437 88 + 81552678 GCAT-GAGGAGGCTGTGGGTCC-GGGAGACCAGAGGCCA-AGGAACCAAATGCTCCCATCAGTCTCAGTTGCTCACCCCATGG---------------TCTGTCCA---- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1427448 85 + 108979918 GCGT----GAGGCTCTGGGTCC-GGTAGACCAGAGGCCG-AGAAACCAAATGTTCCCATCAGTCTCAGTTACTCACCCCAGGG---------------TCTGTCCA---- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1399824 85 - 111193037 GCGT----GAGGCTCTGGGTCC-GGTAGACCAGAGGCCG-AGAAACCAAATGTTCCCATCAGTCTCAGTTACTCACCCCAGGG---------------TCTGTCCA---- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1428302 85 + 3644372 GCGT----GAGGCTCTGGGTCC-GGTAGACCAGAGGCCG-AGAAACCAAATGTTCCCATCAGTCTCAGTTACTCACCCCAGGG---------------TCTGTCCA---- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1381601 85 - 10304083 GCAT----GAGGCTCTGGGTCC-GGTAGACCAGAGGCCG-AGAAACCAAATGTTCCCATCAGTCTCAGTTACTCACCCCATGG---------------TCTGTCCA---- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1457423 85 - 107702431 GCAT----GAGGCTCTGGGTCG-GGTAGACCAGAGGCCG-AGAAACCAAATGTTCCCATCAGTCTCAGTTACTTATCCCATGG---------------TCTGTCCA---- i chlSab2.chr14 C 0 I 241 s manLeu1.NW_012103754v1 939017 85 - 2200435 GCAT----GAGGCTCTGGGTCC-GGTAGACGAGAGGCCG-AGAAACCAAATGTTCCCATCAGTCTCAGTTACTCACCCCAGGG---------------TCTGTCCA---- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1376713 88 - 108792865 GCAC-GAGGAGGCTGTGGGTCCGGGGAGACCAGAGGCCG-GGAAACCACATGCTCCCATCGGTCTCAGTGGCTCA-CCCATGC---------------TGTCTCCA---- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1222603 88 - 7082604 GCAA-GAGGAGGCTGTGGGTCCGGGGAGACCAGAAGCCG-AGGAACCACAGGCTCCCATCCGTCTCAGTGGCTCC-CCCATGC---------------TCTCTCCA---- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1310572 88 + 1864846 GCAC-GAGGAGGGTGTGGGTCCGGGGAGGCCAGAGGCAG-AGGAACCACACGCTCCCGTCGGTCTCAGTGGCTCA-CCCATGC---------------TCTCTCCA---- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 103133 88 + 287728 GCAC-GAGGAGGCTGTGGGTCCGGGGAGACCAGAGGCCA-AGGAATCACATGCTCCCATCGGTCTCCGTGGCTCG-CCCATGC---------------TCTCTCCA---- i aotNan1.NW_018513311v1 I 289 C 0 s dasNov3.JH576208 1697940 105 + 4416731 ACATTAAGGAGGTACTGGATCTAGGGAAATTACAGGACGAAGGAATCAAATACTCTTATTAG-----GCTACATACCTCATAGTGGTGTGGCAGTATTTCAGTCTGCTAA i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90004658 1569 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e colAng1.NW_012118821v1 1377496 1413 - 13651311 M a score=62342.000000 s hg38.chr2_KI270774v1_alt 110795 8 + 223625 GGCTCACA s panTro5.chr2A 1398562 8 + 111504155 GGCTCACA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1348685 2 + 114371477 ------CA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1372939 8 + 1464242 GGCTCACA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1096525 8 + 81552678 GGCTCACA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1427533 8 + 108979918 GGCTCACA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1399909 8 - 111193037 GGCTCACA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1428387 8 + 3644372 GGCTCACA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1381686 8 - 10304083 GGCTCACA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1457749 8 - 107702431 GGCTCACA i chlSab2.chr14 I 241 C 0 s manLeu1.NW_012103754v1 939102 8 - 2200435 GGTTCACG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1376801 8 - 108792865 GGATCATA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1222691 8 - 7082604 GGATCATA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1310660 8 + 1864846 GGATCATA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 103221 8 + 287728 GGATCATA i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1698045 8 + 4416731 GGCTCACA i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90004658 1569 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e colAng1.NW_012118821v1 1377496 1413 - 13651311 M a score=1672643.000000 s hg38.chr2_KI270774v1_alt 110803 190 + 223625 CTCCTTGAGCAGTAAATTCATTCCCTTTTAGCATTCAGGGACCATTTCCAATATTTACAATTTGCTGTGAGTTCCAGGGTGTATTCAGCCTGGAATATCTGCATCTAGATTGGTGATACCATTTGAGTCTGTTTACTGTTCACGGTGAAACACTCTGGGCATTACTGGGATGACAGACAGAAGAGCTAAA s panTro5.chr2A 1398570 190 + 111504155 CTCCTTGAGCAGTAAATTCATTCCCTTTTAGCATTCAGGGACCATTTCCAATATTCACAATTTGCTGTGAGTTCCAGGGTGTATTCAGCCTGGAATATCTGCATCTAGATTGGTGATACCATTTGAGTCTGTTTACTGTTCATGGTGAAACACTCTGGGCATTACTGGGATGACAGACAGAAGAGCTAAA i panTro5.chr2A C 0 I 1271 s panPan2.chr2A 1348687 190 + 114371477 CTCCTTGAGCAGTAAATTCATTCCCTTTTAGCATTCAGGGACCATTTCCAATATTCACAATTTGCTGTGAGTTCCAGGGTGTATTCAGCCTGGAATATCTGCATCTAGATTGGTGATACCATTTGAGTCTGTTTACTGTTCATGGTGAAACACTCTGGGCATTACTGGGATGACAGACAGAAGAGCTAAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1372947 187 + 1464242 CTC---GAACAGTAAATTCATTCCCTTTTAGCATTCAGGGACCATTTCCAATATTCACAATTTGCTGTGAGTTCCAGGGTGTATTCAGCCTGGAATATCTGCACCTAGATTGGTGATACCATTTGAGTCTGTTTACCGTTCACAGTGAAACACTCTGGGCATTACTGGGATGGCATACAGAACAGCTAAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1096533 190 + 81552678 CTCCTTGAGCAGTAAATTCATTCCTTTTTAGCATTCAGGGACCGTTTCCAATATTCACAATTCGCTGTGAGTTCCAGGGTGTATTCAGCCTGGAATATCTGCACCTAGATTGGTGACACCATTTGAGTCTGTTTACTGTTCACAGTGAAACACTCTGGGCATTACTGGGATGGAAGACAGAACAGCTAAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1427541 190 + 108979918 TTCCTTGAGCAGTAAACTCATTCCTTTTTAGCATTCAGGGACCATTTCCAGTATTCACAGTTCGCTGTGAGGTCCAGTGTGTATTCAGCCTGGAATATCTGTACCTGGATTAGTGATACCATTTTAGTCTGTTTACTGTTCACAGTGGAACGCTCTGGGCATTCCTGGGGTGCCAGACAGAACAGCTAAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1399917 190 - 111193037 TTCCTTGAGCAGTAAACTCATTCCTTTTTAGCATTCAGGGACCATTTCCAGTATTCACAGTTCGCTGTGAGGTCCAGTGTGTATTCAGCCTGGAATATCTGTACCTAGATTAGTGATACCATTTTAGTCTGTTTACTGTTCACAGTGGAACGCTCTGGGCATTCCTGGGGTGCCAGACAGAACAGCTAAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1428395 190 + 3644372 TTCCTTGAGCAGTAAACTCATTCCTTTTTAGCATTCAGGGACCATTTCCAGTATTCACAGTTCGCTGTGAGGTCCAGGGTGTATTCAGCCTGGAATATCTGTACCTAGATTAGTGATACCATTTTAGTCTGTTTACTGTTCACAGTGGAACGCTCTGGGCATTCCTGGGGTGCCAGACAGAACAGCTAAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1381694 190 - 10304083 TTCCTTGAGCAGTAAACTCATTCCTTTTTAGCATTCAGGGACCATTTCCAGTATTCACAGTTCGCTGTGAGTTCCAGGGTATATTCAGCCTGGAATATCTGCACCTAGATTAGTGATACCATTTTAGTCTGTTTACTGTTCACAGTGGAACGCTCTGGGCATTCCTGGGGTGCCAGACAGAACAGCTAAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1457757 190 - 107702431 TTCCTTGAGCAGTAAACTCATTCCTTTTTAGCATTCAGGTACCATTTCCAGTATTGACAGTTTGCTGTGAGGTCCAGGGTGTATTCAGCCTGGAATATCCACACCTAGATTAGAGATACCATTTTAGTCTGTTTACTGTTCACAGTGGAGCGTTCTGGGCATTCCTGGGGTGGCAGACAGAACAGCTAAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 939110 190 - 2200435 TTCCTTGAGCAGTAAACTCATTCCTTTTTAGCATTCAGGGACCATTTTCAGTATTCACAGTTCACTGTGAGGTCCAGGGTATATTCAGCCTGGAATATCTGCACCTAGATTAGTGATACCATTTTAGTCTGTTTACTGTTCACAGTGGAACGCTCTGGGCATTCCTGGGGTGCCAGACAGAACAGCTAAA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1376809 188 - 108792865 TTCCTTGAGCAGTAAATTTGTTCCTTCTCAGCATTCAGGG--AGTTTCTGATACTCAGAATTCCCTGTGAGTTCCAGAGTGTATTCAGCCTGGAGTATCTGCACTTAGATTGGTGATACCGTGTGCGTCCGTTTAGTGTTCACAGTGAAACGTTCTGGGCATTGCTGGGGCAGCAGGTAGAACAGCTAAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1222699 174 - 7082604 TTCCTTGAGCAGTAAAGTCGTTCCTTCTCAGCATTCAGGGACAGTTTCCAATATTCAGAATTCACTGTGAGTTCCAGAGTGTATT----------------CACTTAGGTTGGTGATACCATGTGCGTCTGTTTAGTGTTCACAGTGAAACGTTCTGGGCATTGCTGGGGCAGCAGATATAACAGCTAAA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1310668 174 + 1864846 TTCCTTGAGCAGTAAATTTGTTCCTTCTCAGCATTCAGGGACAGTTTCCAGTATTCAGAATTCACTGTGAGTTCCAGAGTATATT----------------CACTTAGATTGGTGATATCATGTGCATCTGTTTAGTGTTCATAGTCAGACGTTCTGGGCATTGCTGGGGCAGCAGATAGAACAGCTAAA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 103229 190 + 287728 TTCCTTGAGCAGTAAATTCATTCCTTCTCAGCATTCAGGGACAGTTTCCAATATTCAGAATTCACTGTGAGTTCCGGAGCGTATTCCGCCCGGAATATCTGCACTTAGATTGGTGATACCATGTGCGTCTGTTCAGTGTTCACAGCGAAACGTTCTGGGCATTGCTGGGGCAGCAGATAGACCAGCTAAA i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90006227 179 - 120129022 CTCCTGGAGCTGCAAATCTGTTCCCTTCCAGCATTCTAAGTCAGTTCCTG--ATTCATGGTTGCCCACGGGCTCCAGGATATACTCA-TCTGGATTATCTGTGCTCAGATCTGTGATGTCATCTCGGT-------GTGCTGACACTGAGATATTCTAGGTTCTGCCTGG-CAGCAGGTTGAGAAGCAAAG i mm10.chr12 I 1569 C 0 s dasNov3.JH576208 1698053 190 + 4416731 TCCTTTGAGTAATAAATCTGGTCGTTTTTAGCATTCAGTGACAGTTTCCAATCTTCACAATTTACTGTGAATTCCAAAATGTATCCAACCTATAATATTTGTCCTTAGAGCTGTGATATCATTTGAGCCTGTTTACTATTAATGTTACACCCTTTCAGGCATTGCCTGGGTGACAGATTGAAAAGCTAAG i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 934202 1873 + 5252280 I e colAng1.NW_012118821v1 1377496 1413 - 13651311 M a score=1658772.000000 s hg38.chr2_KI270774v1_alt 110993 197 + 223625 GGAGTGTTATTATTTAATCA-------AATGAAGCTATTGGATGATGTCCCCAAACCGAGAGCGATCCAGAGAATTCGTGGGAACATACATTTGATGCATGGCTCTG--TGTGGGCTCTTCA-CAT--TAAGAATGCGAAACCAGCTAGAGTCAAAGTTTCCCTAATTTGAGTTTGATTTTCAGATATTTTGCTGCAATTAAGAGCCTG s panTro5.chr2A 1400031 197 + 111504155 GGAGTGTTATTATTTAATCA-------AATGAAGCTATTGGATGATGTCCCCAAACCAAGAGCCATCCGGAGAATTCGTGGGAACATATATTTGATGCATGGCTCTG--TGTGGGCTCTTGA-CAT--TAAGAATGCGAAACCAGCTAGAGTCAAAGTTTCCCTAATTTGAGTTTGATTTTCAGATATTTTGCTGCAATTAAGAGCCTG i panTro5.chr2A I 1271 C 0 s panPan2.chr2A 1348877 197 + 114371477 GGAGTGTTATTATTTAATCA-------AATGAAGCTATTGGATGATGTCCCCAAACCAAGAGCCATCTGGAGAATTCGTGGGAACATATATTTGATGCATGGCTCTG--TGTGGGCTCTTGA-CAT--TAAGAATGCGAAACCAGCTAGAGTCAAAATTTCCCTAATTTGAGTTTGATTTTCAGATATTTTGCTGCAATTAAGAGCCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1373134 197 + 1464242 GGAGTGTTATTATTTAATCA-------AATGAAGCTGTTGGATGATGTCCCCAAACCGAGAGTGATCCGGAGAATTCGTGGGAACATACATTTGATGCATGGCTCTG--TGTGGGCTCTTCA-CAT--TAAGAATGCGAAACCAGCTAGAGTCAAAGTTTCCCTAATTTGAGTTTGATTTTCAGATACTTCGCTGCAATTAAGAGGCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1096723 197 + 81552678 GGAGTGTTATTATTTAATCA-------AATGAAGCTATTGGATGATGTCCCCAAACCGAGAGCAATCTGGAGAATTCATGGGAACACACATTTGATGCATTGCTCTG--TGTAGGCTCTTCA-CAT--TAAGAATGTGAAACCAGCTAGAGTCAAAATTTCCCTAATTTGAGTTTGATTTTCAGATACTTTGCTGCAATTAAGAGCCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1427731 197 + 108979918 GGAGTGTTATTATTTAATCA-------AATGAAGCTACTGGAAGGTGTCCCCGAACCAAGAGCAATCCGCAGAATTCGTGGGAACACACATATGATGCATGGCTCTG--TGTGGGCTCTTCA-CCT--TAAGAATGCAAAACCAGCTAGAGTCAAAGTTCCCCTAATTTGAGTTTGATTTTCAGATATTTTGCTGCAGTTAAGAGCCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1400107 197 - 111193037 GGAGTGTTATTATTTAATCA-------AATGAAGCTACTGGAAGGTGTCCCCGAACCAAGAGCAATCCGCAGAATTCGTGGGAACACACATATGATGCATGGCTCTG--TGTGGGCTCTTCA-CCT--TAAGAATGCAAAACCAGCTAGAGTCAAAGTTCCCCTAATTTGAGTTTGATTTTCAGATATTTTGCTGCAGTTAAGAGCCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1428585 197 + 3644372 GGAGTGTTATTATTTAATCA-------AATGAAGCTACTGGAAGGTGTCCCCGAACCAAGAGCAATCCGCAGAATTCGTGGGAACACACATATGATGCATGGCTCTG--TGTGGGCTCTTCA-CCT--TAAGAATGCAAAACCAGCTAGAGTCAAAGTTCCCCTAATTTGAGTTTGATTTTCAGATATTTTGCTGCAGTTAAGAGCCTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1381884 197 - 10304083 GGAGTGTTATTATTTAATCA-------AATGAAGCTACTGGAAGGTGTCCCTGAACCAAGAGCGATCCGCAGAATTCGTGGGAACACACATATGATGCGTGGCTCTG--TGTGGGCTCTTCA-CCT--TAAGGATGCAAAACCAGCTAGAGTCAAAGTTCCCCTAATTTGAGTTTGATTTTCAGATATTTTGCTGCAGTTAAGAGCCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1457947 197 - 107702431 GGAGTGTTATTATTTAATCA-------AATGAAGCTACTGGATGGTATCCACAAACCGAGAGCGATCCAGAGAATTCGTGGGAACACACATATGATGCACGGCTCTG--TGTGGGCTCTTCA-CCT--TAAGAATGCAAAACCAACTGGAGTCAAAGTTCCCCTAATTTGAGTTTGATTTTCAGATATTTTGCTGCAATTAAGAGCCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 939300 197 - 2200435 GGAGTGTTATTATTTAATCA-------AATGAAGCTACTGGAAGGTGTCCCTGAACCAAGAGCGATCCGCAGAATTCGTGGGAACACACATATGATGCATGGCTCTG--TGTGGGCTCTTCA-CCT--TAAGAATGCAAAACCAGCTAGAGTCAAAGTTCCCCTAATTTGAGTTTGATTTTCAGATATTTTGCTGCAGTTAAGAGCCTG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1376997 198 - 108792865 GGAGCATTTTTGCTCAATCA-------AATGAAGCTTCTGGATGGTGTCCACGAGCCAAGTGCGATCCGGAGAATCAGTGTGAACACATGTTCA---CATGGCTCTGC-CTTGGGCTCCACACCACACTAAGGATGCAAAACCAGCTGGAGTCACAGTTCCCCTAACTTGAGTTTGATTTTCAGATATTGTGCTGTAATTAAACGCCTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1222873 199 - 7082604 GGAGTGTTTTTACTCAGTCA-------AAGGAAGCTTCTGGATGGTGACGACGAGCCAAGAGTGACCCAGAGAATCAGTGCGAACACATGTTCGACTCATGGGTCTGC-CTTGGGCTTCACA-CAC-TTAAGAATGCGAAACCAGCTGGAGTCACGGTTCCCCTAACTTGAGTTTGATTATCAGATACTGTGCTGCAATTAAAAGCCTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1310842 197 + 1864846 GGAGTGTTTTTACTCAGTC--------AGTGAAGCTTCTGGATGGTGTCCACGAGCCAAGAGCGACCCGGAGAATCAGTGTGAACACATGTTCGACGCATGGCTCTTC-CTTGGGCTCCACA-CAC--TAAGAATGCGAAACCAGCTGGAGTCACAGTTCCCCTAACTTGAGTTTGATTTTCAGATATTGTGCTGCAATTAAAAGCCTG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 103419 198 + 287728 GTAGTGTTTTTACTCAATCA-------AATGAAGCTTCTGGATGGTGTCCACGAGCCAAGACCGATCCGGAGAATCAGTGCGAACACATGTCTGACACATGGCTCTGC-CCTGGGCTCCACA-CAC--TAAGAATGCGAAATCAGCTGGAGTCACAGTTCCCCTAACTGGAGTTTGACTTTCAGACATTGTGCTGCAATTTAAAGCCTG i aotNan1.NW_018513311v1 C 0 I 136 s mm10.chr12 90006406 198 - 120129022 GGCATAGGATGACTTATTGAGGACAGCACTGTGGCT-CTGCAT----TCTCCACTCCGCAAAC-ACCCGGGGGACTAAAGGGAACATAAATCTGACACCTGGCTCCCCTCCTTGGCTTGTCA-CAT--GAGGAATGCTGAGCCAGCTAAACACAAAGTTCCCGAAATGGGAGTAT-ATAATC-GATATCTTTCTGCAAAGAGAAGGACA i mm10.chr12 C 0 I 2 s dasNov3.JH576208 1698243 199 + 4416731 GGAGCATTATTATTTAATGAA------AATGACACTGTTGAACAGTGTTCCCCATTATGAAGAGATCCAAGGTATTAATGGGAACATAAATTTGATGTATGGTTCTTCCCATAGCCTATTCC-CAT--TAGGAATGCTGAGCCAGCTAGAGTCAAAAGTCCACAAATTTGAGCTCAA-AATCAGATATTTTGCTGCAGATAATAACATG i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 934202 1873 + 5252280 I e colAng1.NW_012118821v1 1377496 1413 - 13651311 M a score=974579.000000 s hg38.chr2_KI270774v1_alt 111190 147 + 223625 AAAGTGTCACCTATTAATACCTTGCTTATGTTCTGAAGCTGAGGT---CTTAAAGTAACATGCAGCCCTGGGCT-GGGCTGCAAAC--TGTCTGC-------------ATTCGGAATGACCCATGGCTGGGGC----------------CCCTGGGAAATAGCAGCAGATGAACAGAGCAGA s panTro5.chr2A 1400228 147 + 111504155 AAAGTGTCACCTATTAATACCTTGCTTATGTTCTGAAGCTGAGGT---CTTAAAGTAACATGCAGCCCTGGGCT-GGGCTGCAAAC--TGTCTGC-------------ATTCAGAATGACCCATGGCTGGGGC----------------CCCTGGGAAATAGCAGCAGATGAACAGAGCAGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1349074 147 + 114371477 AAAGTGTCACCTATTAATACCTTGCTTATGTTCTGAAGCTGAGGT---CTTAAAGTAACATGCAGCCCTGGGCT-GGGCTGCAAAC--TGTCTGC-------------ATTCAGAATGACCCATGGCTGGGGC----------------CCCTGGGAAATAGCAGCAGATGAACAGAGCAGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1373331 149 + 1464242 CAAGTGTCACCTATTAATACCTTGCTTATGTTCTGAAGCTGAGGT---CTTAAAGTAACATGCAGTCCTGGTCT-GGGCTGCAAACTGTGTCTGC-------------ATTCGGAATGACCCATGGCTGGGGC----------------CCCCGGGAAACAGCAGCAGATAAACAGAGCAGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1096920 149 + 81552678 CAAGTGTCATCTATTAATACCTTGCTTACGTTCTGAAGCTGAGGT---CTTAAAGTAACATGCAGCCCTGGCCT-GGGCTGCAAACTGTGTCTGC-------------ATTCGGAATGACCCATGGCTGGGGC----------------CCCCCAGAAATATCAACAGATGAACAGAGCAGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1427928 149 + 108979918 CAAGTGTCACCTAGTAATACCTTGCTTATGTTCTGAAGCTGAGGT---CTTAAAGTAACATGCAGCCCTGACCT-GGGCTGCAGATTGCGTCTGT-------------GTCCGGaatgagccatggctgcggc----------------ccctgggaaatagcagcagatgaacagagcaga i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1400304 149 - 111193037 CAAGTGTCACCTAGTAATACCTTGCTTATGTTCTGAAGCTGAGGT---CTTAAAGTAACATGCAGCCCTGACCT-GGGCTGCAGATTGCGTCTGT-------------GTCCGGaatgagccatggctgcggc----------------ccctgggaaatagcagcagatgaacagagcaga i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1428782 149 + 3644372 CAAGTGTCACCTAGTAATACCTTGCTTATGTTCTGAAGCTGAGGT---CTTAAAGTAACATGCAGCCCTGACCT-GGGCTGCAGATTGCGTCTGT-------------GTCCGGaatgagccatggctgcggc----------------ccctgggaaatagcagcagatgaacagagcaga i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1382081 149 - 10304083 CAAGTGTCACCTAGTAATACCTTGCTTATGTTCTGAAGCTGAGGT---CTTAAAGTAACATGCAGCCCTGACCT-GGGCTGCAGATTGCGTCTGT-------------GTCCGGaatgagccatggctgcggc----------------ccctgggaaatagcagcagatgaacagagcaga i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1458144 149 - 107702431 CAAGTGTCACCTAGTAATACCTTGCTTATATTCTGAAGCTGAGGT---CTTAAAGTAACATGCAGCCCTGACCT-GGGCTGCAGACTGCATCTGT-------------GTCCAGaatgagccatggctgcggc----------------ccctgggaaatagcagcagatgaacagagcaga i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 939497 149 - 2200435 CAAGTGTCACCTAGTAATACTTTGCTTATGTTCTGAAGCTGAGGT---CTTAAAGTAACATGCAGCCCTGACCT-GGGCTGCAGATTGCGTCTGT-------------GTCCGGaatgagccatggctgcggc----------------ccctgggaaatagcagcagatgaacagagcaga i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1377195 124 - 108792865 CAAGTGTCACCCCTTAATATCTTGCTCATGTGCTGAAGCTGAGGT---CTTACAGTAGGATG--------------------------TGTCTGC-------------CTCTGGAATTACCCACGGCTGCGGC----------------CCCTGGGAAGTAGCTGCAGATGAACAGCGCAGA i calJac3.chr14 C 0 I 3 s saiBol1.JH378218 1223072 123 - 7082604 CAAGTGTCACCCCTTAATATCTTGCTCATGTGCTGAAGCTGAGGT---C-TACAGTAACATG--------------------------TGTCTGC-------------CTCTGGAATGACACACGGCTGTGGC----------------CCCTGGGAAATAGCTGCAGATGAACAGCGCAGA i saiBol1.JH378218 C 0 I 3 s cebCap1.NW_016107827v1 1311039 121 + 1864846 CAAGGGTGGCCTCTTAATATCCTGCTC--GTGCTGAAGCCGAGGT---C-TACAGGAACATG--------------------------TGTCTGC-------------CTCTGGAATGACCCACGGCTGTGGC----------------CCCTGGGAAATAACTGCAGATGAACAGCACAGA i cebCap1.NW_016107827v1 C 0 I 3 s mm10.chr12 90006606 146 - 120129022 CACCTCTCAT---TTAACACCTT-CCCACTCCCTGCAGCTGGAGTGTACTCCCGACAAAATG---------------GCTGCAGATCTTCACTGT-------------AATCGGAG-GTTTAACGGTTAGAGCAGTCTGTTCTGCACCTCCCTGGGGAG-AGCAGCAGAGGGACAGCTGA-- i mm10.chr12 I 2 C 0 s dasNov3.JH576208 1698442 164 + 4416731 CCTCTGTCACTTCTTAATACCTTACTCATGCTCTAAGGTGGAGGT---CTTAAAATAACCTGCAGCACTAGCCTGGGGATGTTGACTGTGATCGTAAAGCTGACATAGAGTTGGAATTACCCATTGTGAAATC---------------TCCCTGGGAAAGAGCAGAAGATTAACAGAGCACA i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 103617 136 + 287728 I e otoGar3.GL873658 934202 1873 + 5252280 I e colAng1.NW_012118821v1 1377496 1413 - 13651311 M a score=419369.000000 s hg38.chr2_KI270774v1_alt 111337 56 + 223625 CTGTGGCTTGTGG-GGTGGTT------G--AAGC-ACCTTTCCAGGCTCTCCTGAACTGAGCTCCC s panTro5.chr2A 1400375 56 + 111504155 CTGTGGCTTGTGG-GGTGGTT------G--AAGC-ACCTTTCCAGGCTCTCCTGAACTGAGCTCCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1349221 56 + 114371477 CTGTGGCTTGTGG-GGTGGTT------G--AAGC-ACCTTTCCAGGCTCTCCTGAACTGAGCTCCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1373480 49 + 1464242 CTGTGGCTTGTGG-GGTGGTT------G--AAGC-AACTTTCCAGGCTCTCCTGAACTG------- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1097069 56 + 81552678 CTGTGGCTTGTGG-GGTGGTT------G--AAGC-ACCTTTCCAGGCTCTCCTGAACTGAGCTCTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1428077 56 + 108979918 ctgTGGCTTGTTGTGGGGGTT------G--AAGC-ACCTCTCCAGGCTCTTCTGAA-TGAGCTGCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1400453 56 - 111193037 ctgTGGCTTGTTGTGGGGGTT------G--AAGC-ACCTCTCCAGGCTCTTCTGAA-TGAGCTGCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1428931 56 + 3644372 ctgTGGCTTGTTGTGGGGGTT------G--AAGC-ACCTCTCCAGGCTCTTCTGAA-TGAGCTGCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1382230 57 - 10304083 ctgTGGCTTGTTGAGGGGGTT------G--AAGC-ACCTCTCCAGGCTCTTTTGAACTGAGCTGCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1458293 56 - 107702431 ctgTGGCTTGTTG-GGGGGTT------G--AAGC-ACCTCTCCAGGCTCTTCTGAACTGAGCTGCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 939646 56 - 2200435 ctgTGGCTTGCTGAGGGGGTT------G--AAGC-ACCTCTCCAGGCTCTTCTGAA-TGAGCTGCC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1377322 56 - 108792865 CTGTGGCTTGTGG-GGTGGTT------G--AAGC-ACCTCTCCAGGCTCTCCTGAACTGAGCTCCC i calJac3.chr14 I 3 C 0 s saiBol1.JH378218 1223198 55 - 7082604 CTGTGGCTTGTGG-GGTGGTT------G--AAGC-ACCTCTCCA-GCTCTCCTGAACTGAGCTCCC i saiBol1.JH378218 I 3 C 0 s cebCap1.NW_016107827v1 1311163 56 + 1864846 CTGTGGCTTGTGG-GATGGTT------G--AAGC-ACCTCTCCAGGCTCTCCTGAACTGAGCTCCC i cebCap1.NW_016107827v1 I 3 C 0 s aotNan1.NW_018513311v1 103753 56 + 287728 CTGTGGCTTGTGG-GGTGGTT------G--AAGCAACCTCTCCAGGCTCTCC-GAACTGAGCTCCC i aotNan1.NW_018513311v1 I 136 I 323 s mm10.chr12 90006752 48 - 120129022 ----------CTG-GGCAATC------GATAAAC-GCCTCACCAAGCCCCGAAGATCAGAGCATAG i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1698606 62 + 4416731 CAGCTGCTTACCG-AGGGGTTTCCGACA--AAAC-ACCTTGCGTAAGGCGTATGAGCAGAGCACGT i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 934202 1873 + 5252280 I e colAng1.NW_012118821v1 1377496 1413 - 13651311 M a score=821703.000000 s hg38.chr2_KI270774v1_alt 111393 111 + 223625 CACAGGCTGGGCTCTGCAGAACATGGACATGACGGGAAAGTGACCAGCCAGCAAGGGAGAGT-CCTCT----GAGCTACACGGCAGTTGCAGGGACAGG--AAGGGCTGGCATGGGCA s panTro5.chr2A 1400431 111 + 111504155 CACAGGCTGGGCTCTGCAGAACATGGACATGACGGGAAAGTGACCAGCCAGCAAGGGAGAGT-CCTCT----GAGCTACACGGCAGTTGCAGGGACAGG--AAGGGCTGGCATGGGCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1349277 111 + 114371477 CACAGGCTGGGCTCTGCAGAACATGGACATGACGGGAAAGTGACCAGCCAGCAAGGGAGAGT-CCTCT----GAGCTACACGGCAGTTGCAGGGACAGG--AAGGGCTGGCATGGGCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1373529 110 + 1464242 -ACAGGCTGGGCTCTGCAGAACATGGACACGATGGGAAAGTGACCAGCCAGCAAGGGAGAGT-CCTCT----GAGCTACACGGCAGCTGCAGGGACAGG--AAGGGCTGGCATGGGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1097125 111 + 81552678 TGCAGGCTGGGCTCTGCAGAACATGGGCATGATGGGAAAGTGACCAGCCAGCAAGGGAGAGC-CCTCT----CAGCTGCACGGCAGCTGCAGGGACAGG--AAGGGCTGGCACGGGCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1428133 111 + 108979918 TGCAGGCTGGGCTCTGCAGAAAGTGGACATGATGGGAAAGTGACCAGCCAGCGAGGGAGAGA-CCTCT----GAGCTTCACGGCAGCTGCAGGGACAGG--AAGGGCTGATGTGGGCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1400509 111 - 111193037 TGCAGGCTGGGCTCTGCAGAAAGTGGACATGATGGGAAAGTGACCAGCCAGCGAGGGAGAGA-CCTCT----GAGCTTCACGGCAGCTGCAGGGACAGG--AAGGGCTGATGTGGGCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1428987 111 + 3644372 TGCAGGCTGGGCTCTGCAGAAAGTGGACATGATGGGAAAGTGACCAGCCAGCGAGGGAGAGA-CCTCT----GAGCTTCACGGCAGCTGCAGGGACAGG--AAGGGCTGATGTGGGCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1382287 111 - 10304083 TGCAGGCTGGGCTCTGCAGAACGTGGACATGATGGGAAAGTGACCAGCCAGCGAGGGAGAGA-CCTCT----GAGCTGCACGGCAGCTGCAGGGACAGG--AAGGGCTGGTATGGGCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1458349 111 - 107702431 TGCAGGCTGGGCTCTGCAGAACGTGGACATGTTGGGAAAGTGACCAGCCAGCAAGGGAGAGC-CGTCT----GAGCTGCACAGCAGCTGCAGGGACAGG--AAGGGCTGGTGTGGGCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 939702 111 - 2200435 TGCAGGCTGGGCTCTGCAGAACGTGGACATGATAGGAAAGTGACCAGCCAGCGAGGGAGAGC-CCTCT----GAGCTTCACGGCAGCTGCAGGGACAGG--AAGGGCTGGTATGGGCA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1377378 111 - 108792865 TGTAAGCTAAGCTCTGCAGAATGTGGACCCGACAGGACAGTGACGAGCCAGCGAGGGAGAGC-CCTCT----GGACTGCATGGCAGTGGCAGGGACAGG--AAGGACTGGCATGAGCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1223253 110 - 7082604 TGTAGGCTAAGCTCTGCAGAATGTGGACACCACAGGACAGTGGCCAGCCAGCGAGGGAGAGC-CCTCT----GGGCTGCACGATAGT-GCAGGGACAGG--AAGGGCTGGCATGAGCA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1311219 110 + 1864846 TGTAGGCTAAGCTCTGCAGAACGTGGACACGACAGGACAGTGACCAGCCAGCGAGGTAGCGC-CCTCT----GGGCTGCATGGCAGT-GCAGGGACAGG--AAGGGCTGGCATGAGCA i cebCap1.NW_016107827v1 C 0 C 0 s mm10.chr12 90006800 100 - 120129022 GGCAGGCTGG---CTACGGAA-------------GGGAGGTGAACAG-CAGGGAGGACCAGT-CCTCTTGAAGAGCTGTGTGATAGCCAAGGGGACAAACCAGAGGAAGATATGGGCA i mm10.chr12 C 0 I 2539 s dasNov3.JH576208 1698668 98 + 4416731 GACAGACTGGGCTCTTAGTAAAACCGAC----CGGGCTA------AGCCAGAGAAGGGACGTGACTCT----TCTTCACAGGGCTAG-GCGGGGA---G--AAGGCCTGGGGCGGAGG i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 103809 323 + 287728 I e otoGar3.GL873658 934202 1873 + 5252280 I e colAng1.NW_012118821v1 1377496 1413 - 13651311 M a score=128003.000000 s hg38.chr2_KI270774v1_alt 111504 15 + 223625 GCATGGCCTGGGGAC s panTro5.chr2A 1400542 15 + 111504155 GCATGGCCTGGGGAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1349388 15 + 114371477 GCATGGCCTGGGGAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1373639 15 + 1464242 GCATGGCCTGGGGAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1097236 15 + 81552678 GCATGGCCTGGGGAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1428244 15 + 108979918 GCGTGGCCTGGGGAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1400620 15 - 111193037 GCGTGGCCTGGGGAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1429098 15 + 3644372 GCGTGGCCTGGGGAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1382398 15 - 10304083 GCGTGACCTGGGGAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1458460 15 - 107702431 GTGTGACCTGGGGAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 939813 15 - 2200435 GCGTGACCTGGGGAC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1377489 15 - 108792865 GCGTGGCCTGGGGAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1223363 15 - 7082604 GCATGGCCTGGGGAC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1311329 15 + 1864846 GCGTGGCCTGGGGAC i cebCap1.NW_016107827v1 C 0 C 0 s dasNov3.JH576208 1698766 15 + 4416731 GCCAGCCCCGGGCAC i dasNov3.JH576208 C 0 I 1409 e aotNan1.NW_018513311v1 103809 323 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e colAng1.NW_012118821v1 1377496 1413 - 13651311 M a score=139029.000000 s hg38.chr2_KI270774v1_alt 111519 26 + 223625 CTATCCGGGGGATCCACTGGGTGATA s panTro5.chr2A 1400557 26 + 111504155 CTATCCAGGGGATCCACTGGGTGATA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1349403 26 + 114371477 CTATCCAGGGGATCCACTGGGTGATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1373654 26 + 1464242 CTATCTGGGGGATCCACTGGGTGATA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1097251 26 + 81552678 CTATCCGGCGGATCCACTGCGTGATA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1428259 26 + 108979918 CCACCCAGGGGACCTGCTGGGCGATA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1400635 26 - 111193037 CCACCCAGGGGACCTGCTGGGCGATA i macFas5.chr13 C 0 I 126 s macNem1.NW_012011978v1 1429113 26 + 3644372 CCACCCAGGGGACCTGCTGGGCGATA i macNem1.NW_012011978v1 C 0 I 42 s cerAty1.NW_012000820v1 1382413 26 - 10304083 CCACCCAGGGGACCTGCTAGGCGATA i cerAty1.NW_012000820v1 C 0 I 42 s chlSab2.chr14 1458475 26 - 107702431 CCATCCAGGGGACCTGCTGGGCGATA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 939828 26 - 2200435 CCATCCAGGGGACCTGCTGGGCGATA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1377504 26 - 108792865 CCATTCAGTGGACCCACTGGGTGAGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1223378 16 - 7082604 ACATCCAGTGGACCTA---------- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1311344 26 + 1864846 CCATCCAGTGGACCCAGTGAATGAGA i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 103809 323 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1698781 1409 + 4416731 I e colAng1.NW_012118821v1 1377496 1413 - 13651311 M a score=69541.000000 s hg38.chr2_KI270774v1_alt 111545 14 + 223625 CCCTCCACGTCACT s panTro5.chr2A 1400583 14 + 111504155 CCCTCCACGTCACT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1349429 14 + 114371477 CCCTCCACGTCACT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1373680 14 + 1464242 CCCTCCAGGTCACG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1097277 14 + 81552678 CCCTCCAGGTCACA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1428285 14 + 108979918 CCCTCCAGGTCACG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1400787 14 - 111193037 CCCTCCAGGTCACG i macFas5.chr13 I 126 C 0 s macNem1.NW_012011978v1 1429181 14 + 3644372 CCCTCCAGGTCACG i macNem1.NW_012011978v1 I 42 C 0 s cerAty1.NW_012000820v1 1382481 14 - 10304083 CCCTCCAGGTCACG i cerAty1.NW_012000820v1 I 42 C 0 s chlSab2.chr14 1458501 14 - 107702431 CCCTCCAGGTCACG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 939854 14 - 2200435 CCCTCCAGGTCACA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1377530 14 - 108792865 CGCTGCAGGACATG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1223394 1 - 7082604 -------------G i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1311370 14 + 1864846 TGCTCCAGGACATG i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 103809 323 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1698781 1409 + 4416731 I e colAng1.NW_012118821v1 1377496 1413 - 13651311 M a score=204136.000000 s hg38.chr2_KI270774v1_alt 111559 30 + 223625 GTCAAGAGCTGAGCTCAGTTTCCCAGACCC s panTro5.chr2A 1400597 30 + 111504155 GTCAAGAGCTGAGCTCAGTTTCCCAGACCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1349443 30 + 114371477 GTCAAGAGCTGAGCTCAGTTTCCCAGACCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1373694 30 + 1464242 GTCAAGAGCTGAGCTCAGTTTCCCAGACCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1097291 30 + 81552678 ATCAAAAGCTGACCTCAGTTTCCCAGACCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1428299 30 + 108979918 CTCAGGAGCTGGGATCAGTTTCCCAGACCC i rheMac8.chr13 C 0 I 126 s macFas5.chr13 1400801 30 - 111193037 CTCAGGAGCTGAGATCAGTTTCCCAGACCG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1429195 30 + 3644372 CTCAGGAGCTGAGATCAGTTTCCCAGACCG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1382495 30 - 10304083 CTCAGGAGCTGGGATCAGTTTCCCAGACCG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1458515 30 - 107702431 CTCAGGAGCTGGGATCAGTTTCCCAGACCC i chlSab2.chr14 C 0 I 84 s manLeu1.NW_012103754v1 939868 30 - 2200435 CTCAGGAGCTGGGATCAGTTTCCCAGACCC i manLeu1.NW_012103754v1 C 0 I 42 s calJac3.chr14 1377544 28 - 108792865 GTCAGGAGCTGAG--CTCTTTCCCAGACCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1223395 28 - 7082604 GTCAGGAGCTGAG--CTGTTTCCCAAACCA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1311384 28 + 1864846 GTCAGGAGCTGAG--CGGTTTCCCAGACCC i cebCap1.NW_016107827v1 C 0 C 0 s dasNov3.JH576208 1700190 30 + 4416731 GTTATGTGCTGAACTCTGGTTCCCAGACCA i dasNov3.JH576208 I 1409 C 0 e aotNan1.NW_018513311v1 103809 323 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e colAng1.NW_012118821v1 1377496 1413 - 13651311 M a score=100013.000000 s hg38.chr2_KI270774v1_alt 111589 13 + 223625 CTGCTTTCCTGAC s panTro5.chr2A 1400627 13 + 111504155 CTGCTTTCCTGAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1349473 13 + 114371477 CTGCTTTCCTGAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1373724 13 + 1464242 CTGCCTTCCTGAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1097321 13 + 81552678 CTGCTTTCCTGAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1428455 13 + 108979918 CTGCTTTCCTGAT i rheMac8.chr13 I 126 C 0 s macFas5.chr13 1400831 13 - 111193037 CTGCTTTCCTGAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1429225 13 + 3644372 GTGCTTTCCTGAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1382525 13 - 10304083 CTGCTTTCCTGAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1458629 13 - 107702431 CTGCTTTCCTGAT i chlSab2.chr14 I 84 C 0 s manLeu1.NW_012103754v1 939940 13 - 2200435 CTGCTTTCCTGAT i manLeu1.NW_012103754v1 I 42 C 0 s calJac3.chr14 1377572 13 - 108792865 TTGATTCCCTGAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1223423 13 - 7082604 CTGTTTCCCTGAT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1311412 13 + 1864846 CTGTTTCCCTGAT i cebCap1.NW_016107827v1 C 0 C 0 s dasNov3.JH576208 1700220 13 + 4416731 TTGGTTCCTTGAT i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 103809 323 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e colAng1.NW_012118821v1 1377496 1413 - 13651311 M a score=852224.000000 s hg38.chr2_KI270774v1_alt 111602 105 + 223625 GTACCCCTT--TTGGGCCCAGATTGTGTTGTCCCATGGGTGCCAGGCAAAAGAAGGGATGAGACA-GGTGAGCCCTCGAGTGGGTGCAGGTGATGTTCTAGGAAGCAG s panTro5.chr2A 1400640 105 + 111504155 GTACCCCTT--TTGGGCCCAGATTGTGTTGTCCCATGGGTGCCAGGCAAAAGAAGGGATGAGACA-GGTGAGCCCTCGAGTGGGTGCAGGTGATGTTCTAGGAAGCAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1349486 105 + 114371477 GTACCCCTT--TTGGGCCCAGATTGTGTTGTCCCATGGGTGCCAGGCAAAAGAAGGGATGAGACA-GGTGAGCCCTCGAGTGGGTGCAGGTGATGTTCTAGGAAGCAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1373737 105 + 1464242 GTACCCCTT--TCGGGCCCAGATTGTGTTGGCCCCTGGGTGCCAGACAAAAGAAGGGATGAGACA-GGTGAGCCTTTGAGTGGGCGCAGGTGGTGTTCTAGGAAGCAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1097334 105 + 81552678 GTACCCCTT--TTGGGCCCAGATTGTGTTGTCCCGTGGGTGCCAGGCAAAAGAAGGGATGAAACA-GGTGAGCCCTCGAGTGGGTGCAGGTGTTGTTCTAGGAGGCAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1428468 101 + 108979918 ATACCTCTT--TTGGGTCCTGATTGTGTTGTCCCATGGGTGCCAGGCAAAAGAAGGGATGAGACA--GTGAGCCCTCGAGTGGGTGCAGG---TGTTCTAGGAGGCAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1400844 101 - 111193037 ATACCTCTT--TTGGGTCCTGATTGTGTTGTCCCGTGGGTGCCAGGCAAAAGAAGGGATGAGACA--GTGAGCCCTCAAGTGGGTGCAGG---TGTTCTAGGAGGCAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1429238 101 + 3644372 ATACCTCTT--TTGGGTCCTGATTGTGTTGTCCCGTGGGTGCCAGGCAAAAGAAGGGATGAGACA--GTGAGCCCTCGAGTGGGTGCAGG---TGTTCTAGGAGGCAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1382538 101 - 10304083 ATACCCCTT--TTGGGTCCAGATTGTGTTGTCCCATGGGTGCCAGGCAAAAGAAGGGATGAGACA--GTGAGCCCTCGAGTGGGTGCAGG---TGTTCTAGGAGGCAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1458642 104 - 107702431 ATACCCCTT--TTGGGTCCTGATTGTGTTGTCCCATGGGTGCCAGGCAAAAGAAGGGATGAGACA--GTGAGCCCTCGAGTGGGTATAGGTGTTGTTCTAGGAGGCAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 939953 104 - 2200435 ATACCCCTT--TTGGGTCTAGATTGTGTTGTCCCATGGGTGCCAGGCAAAAGAAGGGATGAGACA--GTGAGCCCTTGAGTGGGTGCAGGTGTTGTTCTAGGAGGCAG i manLeu1.NW_012103754v1 C 0 I 20 s colAng1.NW_012118821v1 1378924 101 - 13651311 GTATCCCTT--TTGGGTCCAGAC--TGTTGTCCCATGGGTGCCAGGCAAAAGAAGGGATGCGACA--GTGGGCCCTCGAGTGGGTGCAGGTGTTGTTCTAGG-GGCAG i colAng1.NW_012118821v1 M 1413 C 0 s calJac3.chr14 1377585 105 - 108792865 GTAGCCCTT--TTGGGGCTAGCTTGTATCGTCCCATGGGCGCCAGGTGAGAGAAGGGATGAGACA-GGTGAGCCCTGGAGTGCGTGTAGGTGATGTTGTAGGAGGCAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1223436 105 - 7082604 GTAGCCCTT--TTGGTGCCAGCTTGTGTTGTCCCATGGGTGACAGGTGAGAGAAAGGATGAGACA-GGTGAGCCCTCAAGTGGGTGTAGGTGATGTTCTAGGAGGCAC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1311425 99 + 1864846 GTAGCCCTT--TTGGTGCCAGCTTGTGTTGTCCCATGGGTGCCAGGTGAGAGAAGGGATGAGACA-GGTGAGCCCTCGAGTG------GGTGATGTTCTAGGAGGCAC i cebCap1.NW_016107827v1 C 0 C 0 s dasNov3.JH576208 1700233 108 + 4416731 GTCCCCCCTCCTTGAGACCAGGCTGTGGCATCCCTTGAATGCTGAGCAAAGGAAGGGATAAGAAATAATGAGCTATTGACTGGTTTAGAATGAGGTTCTAGGGAGAAT i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 103809 323 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I a score=-16177.000000 s hg38.chr2_KI270774v1_alt 111707 4 + 223625 AG-AA s panTro5.chr2A 1400745 4 + 111504155 AG-AA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1349591 4 + 114371477 AG-AA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1373842 4 + 1464242 AG-AA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1097439 4 + 81552678 AG-AA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1428569 1 + 108979918 -G--- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1400945 1 - 111193037 -G--- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1429339 1 + 3644372 -G--- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1382639 1 - 10304083 -G--- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1458746 1 - 107702431 -G--- i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1379025 3 - 13651311 AGA-- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1377690 4 - 108792865 AG-GA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1223541 4 - 7082604 AG-AA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1311524 4 + 1864846 AG-AA i cebCap1.NW_016107827v1 C 0 C 0 s dasNov3.JH576208 1700341 3 + 4416731 AG-A- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 103809 323 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e manLeu1.NW_012103754v1 940057 20 - 2200435 I a score=168391.000000 s hg38.chr2_KI270774v1_alt 111711 23 + 223625 AGTGGATTTCATCAAAAGGAGCA s panTro5.chr2A 1400749 23 + 111504155 AGTGGATTTCATCAAAAGGAGCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1349595 23 + 114371477 AGTGGATTTCATCAAAAGGAGCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1373846 23 + 1464242 AGTGGATTTCATCAAAAGGAGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1097443 23 + 81552678 AGTGGATTTCATCAAAAGGAGCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1428570 23 + 108979918 AGTAGATTTCCTCAAAAGGAGCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1400946 23 - 111193037 AGTAGATTTCCTCAAAAGGAGCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1429340 23 + 3644372 AGTAGATTTCCTCAAAAGGAGCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1382640 23 - 10304083 AGTAGATTTCCTCAAAAGGACCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1458747 23 - 107702431 AGTAGATTTCCTCAAAAGGAGCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 940077 23 - 2200435 AGTAGATTTCCTCAAAAGGACCA i manLeu1.NW_012103754v1 I 20 C 0 s colAng1.NW_012118821v1 1379028 22 - 13651311 -GTAGATTTCATCAAAGGGAGCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1377694 23 - 108792865 AGAGATTGTCATCAGAAGCAGTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1223545 23 - 7082604 AGTGGATTTCATCAGAAGCAGCA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1311528 23 + 1864846 AGTGGATTTCATCAGAAGCAGTG i cebCap1.NW_016107827v1 C 0 C 0 s dasNov3.JH576208 1700344 10 + 4416731 -------------AAAAGTTGTG i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 103809 323 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I a score=304843.000000 s hg38.chr2_KI270774v1_alt 111734 32 + 223625 -CCCTTGGCCT--TCAGATCTCCAGAGAATTCTTG s panTro5.chr2A 1400772 32 + 111504155 -CCCTTGGCCT--TCAGATCTCCAGAGAATTCTCG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1349618 32 + 114371477 -CCCTTGGCCT--TCAGATCTCCAGAGAATTCTCG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1373869 32 + 1464242 -CCCTTGGCCT--TCAGATCTCCAGAGAATTCTCG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1097466 32 + 81552678 -CCCTTGGCCT--TCAGACCTCCAGAGAATTCTCG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1428593 32 + 108979918 -CCCTTGGCCT--TCAGATCTCCAGAGAATTCTCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1400969 32 - 111193037 -CCCTTGGCCT--TCAGATCTCCAGAGAATTCTCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1429363 32 + 3644372 -CCCTTGGCCT--TCAGATCTCCAGAGAATTCTCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1382663 32 - 10304083 -CCCTTGGCCT--TCAGATCTCCAGAGAATTCTCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1458770 32 - 107702431 -CCCTTGGCCT--TCAGATCTCCAGAGAATTCTCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 940100 32 - 2200435 -CCCTTGGCCT--TCAGATCTCCAGAGAATTCTCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1379050 34 - 13651311 -CCGTTGGCCTCCTCAGATCTCCAGAGAATTCTCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1377717 30 - 108792865 -CTCTTGGCCT--TCAGTTCT-CAGAG-ATTCTGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1223568 30 - 7082604 -CCCTCGGCCT--TCAGATCT-CAGAG-ATTCTCG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1311551 30 + 1864846 -CCCTTGGCCT--TCAGATCT-CAGAG-ATTCTCG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 104132 30 + 287728 -CCCTTGGCCT--TCAGATCT-CAGAG-ATTCTCG i aotNan1.NW_018513311v1 I 323 C 0 s dasNov3.JH576208 1700354 33 + 4416731 CCTGTTGGCCT--TGAGATCTCCATAGATGTCTTG i dasNov3.JH576208 C 0 I 815 e mm10.chr12 90006900 2539 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I a score=133954.000000 s hg38.chr2_KI270774v1_alt 111766 15 + 223625 TT-CTTCCTATTAGCC s panTro5.chr2A 1400804 15 + 111504155 TT-CTTCCTATTAGCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1349650 15 + 114371477 TT-CTTCCTATTAGCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1373901 15 + 1464242 TT-CTTCCTATTAGCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1097498 15 + 81552678 TC-CTTCCTGTTAGCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1428625 15 + 108979918 TT-CTTCCTGTTAACC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1401001 15 - 111193037 TT-CTTCCTGTTAACC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1429395 15 + 3644372 TT-CTTCCTGTTAACC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1382695 15 - 10304083 TT-CTTCCTGTTAACC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1458802 15 - 107702431 TT-CTTCCTGTTAACC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 940132 15 - 2200435 TT-CTTCCTGTTAACC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1379084 15 - 13651311 TC-CTTCCTATTAGCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1377747 15 - 108792865 TT-CTTCCTATCAGCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1223598 15 - 7082604 TT-CTTCCTAACAGCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1311581 15 + 1864846 TT-CTTCCTATCAGCC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 104162 16 + 287728 TTCCTTTCTATCAGCC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90006900 2539 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1700387 815 + 4416731 I a score=309562.000000 s hg38.chr2_KI270774v1_alt 111781 27 + 223625 AAATGTCTTGCTCA--GATAGATTTTAGA s panTro5.chr2A 1400819 27 + 111504155 AAATGTCTTGCTCA--GATAGATTTTAGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1349665 27 + 114371477 AAATGTCTTGCTCA--GATAGATTTTAGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1373916 27 + 1464242 AAATGTCTTGCTCA--GATAGATTTTAGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1097513 27 + 81552678 AAATGTCTTGCTCA--GATAGATTTTAGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1428640 27 + 108979918 AAATGTCTTGCTCA--GATAGATTTTAGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1401016 27 - 111193037 AAATGTCTTGCTCA--GATAGATTTTAGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1429410 27 + 3644372 AAATGTCTTGCTCA--GATAGATTTTAGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1382710 27 - 10304083 AAATGTCTTGCTCA--GATAGATTTTAGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1458817 27 - 107702431 AAATGTCTTGCTCA--GATAGATTTTAGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 940147 27 - 2200435 AAATGTCTTGCTCA--GATAGATTTTAGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1379099 27 - 13651311 AAATGTCTTGCTCA--GATAGATTTTAGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1377762 27 - 108792865 AAATTTCTTGCTCA--GATAGATTTTAGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1223613 27 - 7082604 AAATTGCTTGCTCA--GATAGATTTTAGA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1311596 27 + 1864846 AAATTTCTTGCTCA--GATAGATTTTAGA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 104178 27 + 287728 AAATTTCTTGCTCA--GATAGATTTTAGA i aotNan1.NW_018513311v1 C 0 I 1214 s dasNov3.JH576208 1701202 29 + 4416731 AAGTCTTCTGCTTAGTGATAGATTTTAAA i dasNov3.JH576208 I 815 C 0 e mm10.chr12 90006900 2539 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I a score=190307.000000 s hg38.chr2_KI270774v1_alt 111808 19 + 223625 TAAATGTGTCCAAGGAAAG s panTro5.chr2A 1400846 19 + 111504155 TAAATGTCTCCAAGGAAAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1349692 19 + 114371477 TAAATGTCTCCAAGGAAAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1373943 19 + 1464242 TAAATGTCTCCAAGGAAAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1097540 19 + 81552678 TAAATGTCTCCAAGGAAAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1428667 19 + 108979918 TAAATGTCTGCAAGGAAAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1401043 19 - 111193037 TAAATGTCTGCAAGGAAAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1429437 19 + 3644372 TAAATGTCTGCAAGGAAAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1382737 19 - 10304083 TAAATGTCTCCAAGGAAAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1458844 19 - 107702431 TAAATATCTCCAAGGAAAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 940174 19 - 2200435 TAAATGTCTGCAAGGAAAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1379126 19 - 13651311 TAAATGTCTGCAAGGAAAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1377789 19 - 108792865 TAAATGTCTCCAAGGAAAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1223640 19 - 7082604 TAAATGTCTCCAAGGAAAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1311623 19 + 1864846 TAAATGTCTCCAAGAAAAG i cebCap1.NW_016107827v1 C 0 C 0 s dasNov3.JH576208 1701231 19 + 4416731 TAAATTTCTCTAAGGAAAG i dasNov3.JH576208 C 0 I 3081 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I a score=660683.000000 s hg38.chr2_KI270774v1_alt 111827 88 + 223625 CACGCATTTTGGGGAGGGTTGCTATCCTGTCTACCATGGCGAGTCCTggggaacctgcacaggtgcttacactctggctctgct---gctg s panTro5.chr2A 1400865 88 + 111504155 CATGCGTTTTGGGGAGGGTTGCTATCCTGTCTACCATGGCGAGTCCTggggaacctgcacaggtacttacactctggctgtgct---gctg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1349711 88 + 114371477 CACGCGTTTTGGGGAGGGTTGCTATCCTGTCTACCATGGCGAGTCCTggggaacctgcacaggtacttacactctggctgtgct---gctg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1373962 88 + 1464242 CACGCGTTTTGGGGAGGGTTGCTATCCTGTCTACCATGGCGAGTCCTggggaacctgcacaggtgcttacactctgtctctgct---gctg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1097559 88 + 81552678 CACGCGTTTTGGGGAGGGTTGCTATCCTGTCTACCACAGCGAGTCCTggggaacctgcacaggtgcttatgctgtggctctgct---gctg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1428686 90 + 108979918 CATGCGTTTT-GGGAGGGTTGCTATCCTCTCTACCATGGCGAGTCCTGgggaagctgcacaggtgcctacgctctggctctgccgcagctg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1401062 90 - 111193037 CATGCGTTTT-GGGAGGGTTGCTATCCTCTCTACCATGGCGAGTCCTGgggaagctgcacaggtgcctacgctctggctctgccgcagctg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1429456 76 + 3644372 CATGCGTTTT-GGGAGGGTTGCTATGCTCTCTACCATGGCGAGTCCTGGGGAAGCTGCACA--------------GGCTCTGCCGCAGCtg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1382756 90 - 10304083 CATGCGTTTT-GGGAGGGTTGCTATCCTCTCTACCATGGCGAGTCCTggggaacctgcacaggtgcctacgctctggctctgccgcagctg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1458863 90 - 107702431 CATGCGTTTT-GGGAGGGTTGCTATCCTCTCTACCATGGCGAGTCCTggggaacctgcacaggtgcctacgctctgtctctgccgcagctg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 940193 90 - 2200435 CATGCGTTTT-GGGAGGGTTGCTATCCTCTCTACCATGGTGAGTCCTggggaacctgcacaggtgcctacactctggctctgccgcagctg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1379145 90 - 13651311 CATGCGTTTT-GGGAGGGTTGCTATCCTTTCTACCATGGCGAGTCCTggggaacctgcacaggtgcctacgctctggctctgccgcagctg i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1377808 87 - 108792865 CATGCATTCTGGGGAGGGTAACTATCCTGTCCGCCATGCCGGGTCCTGGGGAACCC-CACAGGTGCTTATGCTCCGGCTCTGCT---GCTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1223659 87 - 7082604 CATGCATTTTGGGGAGGGTCACTATCCTGTCTGCCATGCCGAGTCCTggggaaccc-cacaggtgcttatgctccggctctgct---gctg i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1311642 87 + 1864846 CATGCATTTTGGGGAGGGTCACTGTCCTGTCCTCCATGCCGAGTcatggggaaccc-cacaggtgcttatgctccggctctgct---gctg i cebCap1.NW_016107827v1 C 0 I 24 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1701250 3081 + 4416731 I a score=196270.000000 s hg38.chr2_KI270774v1_alt 111915 28 + 223625 ctgtgactgacaatgtcacttgtgtctg s panTro5.chr2A 1400953 28 + 111504155 ctgtgactgacaatgtcacttgtgtctg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1349799 28 + 114371477 ctgtgactgacaatgtcacttgtgtctg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1374050 28 + 1464242 ctgtgactgacagtgtcacttgtgtctg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1097647 28 + 81552678 ctgtgactgacaatgtcacttgtgtccg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1428776 28 + 108979918 ctgcgactgacaatgtcacttgcgtctg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1401152 28 - 111193037 ctgcgactgacaatgtcacttgcgtctg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1429532 28 + 3644372 ctgcgactgacaatgtcacttgcgtctg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1382846 28 - 10304083 ctgccactgacaacgtcacttgcgtctg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1458953 28 - 107702431 ctgcgactgacaatgtcacttgcgtctg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 940283 28 - 2200435 ctgcgactgacaatgtcacttgcgtctg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1379235 28 - 13651311 ctgtgactgacaacgtcacttgcgtctg i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1377895 28 - 108792865 TTGTGACTGACAAAGTCATTTGCTCCTG i calJac3.chr14 C 0 I 66 s saiBol1.JH378218 1223746 28 - 7082604 ctgtgagtgaacaagtcatttgttcctg i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e cebCap1.NW_016107827v1 1311729 24 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1701250 3081 + 4416731 I a score=7800.000000 s hg38.chr2_KI270774v1_alt 111943 1 + 223625 g s panTro5.chr2A 1400981 1 + 111504155 g i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1349827 1 + 114371477 g i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1374078 1 + 1464242 g i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1097675 1 + 81552678 g i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1428804 1 + 108979918 g i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1401180 1 - 111193037 g i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1429560 1 + 3644372 g i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1382874 1 - 10304083 g i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1458981 1 - 107702431 g i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 940311 1 - 2200435 g i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1379263 1 - 13651311 g i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1223774 1 - 7082604 G i saiBol1.JH378218 C 0 I 346 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e cebCap1.NW_016107827v1 1311729 24 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1701250 3081 + 4416731 I e calJac3.chr14 1377923 66 - 108792865 I a score=1121892.000000 s hg38.chr2_KI270774v1_alt 111944 201 + 223625 gccgagagtctcctgtctttggctggcatccatgaactatggctggctaatgtgttagttgtaagtagctataatctcagtgtcctcaaagttcatgacTGTATAGTACCTTTTACAAACATGTCAGCCGATATAAAACAC--GTGTTTTATATTTTAAGTTAAATGTCATACGCATTTGTATGTACATGAAGTTATTTCTAA s panTro5.chr2A 1400982 201 + 111504155 gctgagagtctcctgtctttggctggcatccatgaactatggctggctaatgtgttagttataagtagctataatctcagtgtcctcaaagttcatgacTATATAGTACCTTTTACAAACATGTCAGCAGATATAAAACAC--GTGTTTTATATTTTAAGTTAAATGTCATATGCATTTGTATGTACATGAAGTTATTTCTAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1349828 201 + 114371477 gccgagagtctcctgtctttggctggcatccatgaactatggctggctaatgtgttagttataagtagctataatttcagtgtcctcaaagttcatgacTATATAGTACCTTTTACAAACACGTCAGCAGATATAAAACAC--GTGTTTTATATTTTAAGTTAAATGTCATATGCATTTGTATGTACATGAAGTTATTTCTAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1374079 203 + 1464242 gccaggagtctcctgtctttggctggcatccatgaactgtggctggctaatgtgttagttataagtagctacaatctcagtgtcctcaaagttcatgacTATATAGTACCTTTTACAAACATGTCAGCAGATATAAAACACATATGTTTTATATTTTAAGTTAAATGTCATATGCATTTGTATGTACATGAAGTTATTTCTAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1097676 203 + 81552678 gccaggagtctcctgtctttggctggcatccatgaactgtggctggctaatgtgttagttataagtagctacaatctcagtgtcctcaaagttcatgacTCTATAGTACTTTTTACAAACATGTCAGCAGATCTAAAACACATATATTTTATATTTTAAGTTAAATATCATATGCATTTGTATGTACATGAAGTTATTTCTAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1428805 203 + 108979918 gccaggagtctcctgtcttcggctggcatccatgaactgtggctggctaacgtgttagttataagtagctacaatctcagtgtcctcaaagttcatgacTATATACTACCTTTCACAAACATGTCAGCAGATCTAAAACACATATATTGTATATTTTAAGTTAAATATCGCATGCATTTGTATGTACATAAAGTTATTTCTAA i rheMac8.chr13 C 0 I 255 s macFas5.chr13 1401181 203 - 111193037 gccaggagtctcctgtcttcggctggcatccatgaactgtggctggctaacgtgttagttataagtagctacaatctcagtgtcctcaaagttcatgacTATATACTACCTTTTACAAACATGTCAGCAGATCTAAAACACATATATTGTATATTTTAAGTTAAATATCGCATGCATTTGTATGTACATAAAGTTATTTCTAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1429561 203 + 3644372 gccaggagtctcctgtcttcggctggcgtccatgaactgtggctggctaacgtgttagttataagtagctacaatctcagtgtcctcaaagttcatgacTATATACTACCTTTTACAAACATGTCAGCAGATCTAAAACACATATATTGTATATTTTAAGTTAAATATCGCATGCATTTGTATGTACATAAAGTTATTTCTAA i macNem1.NW_012011978v1 C 0 I 255 s cerAty1.NW_012000820v1 1382875 203 - 10304083 gccagcagtctcctgtctttggctggcatccatgaactgtggctggctaacgtgttagttataagtagctacaatctcagtgtcctcaaagttcatgacTATATAGTACCTTTTACAAATATGTCAGCAGATCTAAAACACATATATTGTATATTTTAAGTTAAATATCGCATGCATTTGTATGTACATGAAGTTATTTCTAA i cerAty1.NW_012000820v1 C 0 I 254 s chlSab2.chr14 1458982 199 - 107702431 gccaggagtctcctgtcttcagctggcatccaggaactgtggctggctaatgt----gttataagtagctacaatctcagtgtcctcaaagttcatgacTATATAGTACCTTTTACAAACATGTCAGCAGATCTAAAACACATATATTGTATATTTTAAGTTAAATATCGCATGCATTTGTATGTACATAAAGTTATTTCTAA i chlSab2.chr14 C 0 I 11342 s manLeu1.NW_012103754v1 940312 203 - 2200435 gccaggagtctcctgtcttcggctggcatccatgaactgtggctggctaacgtgttagttataagtggctacaatctcagtgtcctcaaagttcatgacTATATACTACCTTTTACAAACATGTCAGCAGATCTAAAACACATATATTGTATATTTTAAGTTAAATATCGCATGCATTTGTATGTACATAAAGTTATTTCTAA i manLeu1.NW_012103754v1 C 0 I 257 s colAng1.NW_012118821v1 1379264 195 - 13651311 gccaggcgtctcctgtctttggctggcatccatgaactgtggctggctaatgtgttagttataagtagctacaatctcagtgtcctcaaagttcatgacTATATAGTACCTTTTACAAACATG--------TCTAAAACACATATATTGTATATTTTAAGTTAAATATCACATGCATTTGTATGTACATGAAGTTATTTCTAA i colAng1.NW_012118821v1 C 0 I 2856 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e saiBol1.JH378218 1223775 346 - 7082604 I e cebCap1.NW_016107827v1 1311729 24 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1701250 3081 + 4416731 I e calJac3.chr14 1377923 66 - 108792865 I a score=7241.000000 s hg38.chr2_KI270774v1_alt 112145 8 + 223625 TATATATG s panTro5.chr2A 1401183 8 + 111504155 TATATATG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1350029 8 + 114371477 TATATATG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1374282 8 + 1464242 TATATATG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1097879 8 + 81552678 CATATTTG i nomLeu3.chr19 C 0 I 246 s macFas5.chr13 1401384 8 - 111193037 GGTACATG i macFas5.chr13 C 0 I 247 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e saiBol1.JH378218 1223775 346 - 7082604 I e cebCap1.NW_016107827v1 1311729 24 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1701250 3081 + 4416731 I e calJac3.chr14 1377923 66 - 108792865 I e colAng1.NW_012118821v1 1379459 2856 - 13651311 I e manLeu1.NW_012103754v1 940515 257 - 2200435 I e chlSab2.chr14 1459181 11342 - 107702431 I e cerAty1.NW_012000820v1 1383078 254 - 10304083 I e macNem1.NW_012011978v1 1429764 255 + 3644372 I e rheMac8.chr13 1429008 255 + 108979918 I a score=3956270.000000 s hg38.chr2_KI270774v1_alt 112153 1044 + 223625 Gtgagtgatttgccccatcccgttggtgataagggagtttttgctcagttacttcacgtgagatctggttgtttaaaagtctgtggcatctcccccactctactctcctgctcctgctcttactccgggacctgaccactccccattcaacttctgccatggttgtcggcttcatgaggccctcaccagaagccaggcaggtgcaggagccatgcttatatagccagaagaaccgtgagccaattaaac-----ttcttttctgggtaaattaccaagtctcaggtatttctttatagcaatgtgaaaatggcctaacacagaaaactggtactgaggagtagggtgtttctataaagatacctgaaattgtggcagtggctttggaactgtgtaatggca-ggggttggaagagtttggagggctgagaagaagagagaaagacaagggaaagtttagaacttcctagagacttgccaaatgactgtgaccaaaacgctggtagaaataaggacagtgaaggccaggctgacatggtctcagatggaaatgaggaacttactgggaactggaggtagaggccgcctgtgctatgcctcagcaaagagcttggctgcattgtgtccaagtcgtgggcatctatggaaatttgaactt-acgagtgatgacttggagtatctggcagaagaaatttctatgcagcaaagaattcaaggggtggtctggcttcttctaacaaccaaccatcagatatgagagcaaagaaatgatttgtatttggaaattatatttaaaagggaagcagagcataaacatttggaaaatttgcaggctagccacttgatagaaaacaatatcctgttttcagggaaagaattaaagggggttgttggagtaaccatttactagagagattagcatgactaaaagggagccaagtgctactatccaagacaacaggaaaagggcctcgaagaaagcatggtataagtcctcaggacagcccttactgtaacaaggccagagatctaggaggaaagaatgacttca s panTro5.chr2A 1401191 1045 + 111504155 Gtgagtgatttgccccatcccgttggtgataagggagtttttgctcagttacttcacgtgagatctggttgtttaaaattctgtggcatctcccccactctactctcctgctcctgctcttactccgggacctgatcactccccattcaacttctgccgtggttgtcggcttcgtgaggccctcaccagaagccaggcaggtgcaggagccatgcttatatagccagaagaaccgtgagccaattaaac-----ttcttttctgggtaaattaccaagtctcaggtatttctttatagcaatgtgaaaatggcctaacacagaaaattggtactgaggagtagggtgtttctataaagatacctgaaattgtgggagtggctttggaactgtgtaatggca-ggggttggaagagtttggagggctgagaagaagacagaaagacaagggaaagtttagaacttcctagagacttgccaaatgactgtgaccaaaacgcgggtagaaataaggacagtgaaggccaggctgacatggtctcagatggaaatgaggaacttactgggaactggaggtagaggtcgcctgtgctatgcctcagcaaagagcttggctgcattgtgtccaagtcgtgggcatctatggaaatttgaacttaacgagtgatgacttggagtatctggcagaagaaatttctatgcagcaaagaattcaaggggtggtctggcttcttctaacaaccaaccatcagatatgagagcaaagaaatgatttgtatttggaacttatatttaaaagggaagcagagcataaacatttggaaaatttgcaggctagccacctgatagacaacaatatcctgttttcagggaaagaattaaagggggttgttggagtaaccatttactagagagactagcatgactaaaagggagccaagtgctactatccaagacaataggaaaagggcctcgaagaaagcatggtataagtcctcaggacagcccttactgtaacaaggccagagatctaggaggaaagaatgacttca i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1350037 1044 + 114371477 Gtgagtgatttgccccatcccgttggtgataagggagtttttgctcagttacttcacgtgagatctggttgtttaaaattctgtggcatctcccccactctactctcctgctcctgctcttactctgggacctgatcactccccattcaacttctgccgtggttgtcggcttcgtgaggccctcaccagaagccaggcaggtgcaggagccatgcttatatagccagaagaaccgtgagccaattaaac-----ttcttttctgggtaaattaccaagtctcaggtatttctttatagcaatgtgaaaatggcctaacacagaaaattggtactgaggagtagggtgtttctataaagatacctgaaattgtgggagtggctttggaactgtgtaatggca-ggggttggaagagtttggagggctgagaagaagacagaaagacaagggaaagtttagaacttcctagagacttgccaaatgactgtgaccaaaacgcgggtagaaatagggacagtgaaggccaggctgacatggtctcagatggaaatgaggaacttactgggaactggaggtagaggtcgcctgtgctatgcctcagcaaagagcttggctgcattgtgtccaagtcgtgggcatctatggaaatttgaactt-acgagtgatgacttggagtatctggcagaagaaatttctatgcagcaaagaattcaaggggtggtctggcttcttctaacaaccaaccatcagatatgagagcaaagaaatgatttgtatttggaacttatatttaaaagggaagcagagcataaacatttggaaaatttgcaggctagccacctgatagacaacaatatcctgttttcagggaaagaattaaagggggttgttggagtaaccatttactagagagactagcatgactaaaagggagccaagtgctactatccaagacaataggaaaagggcctcgaagaaagcatggtataagtcctcaggacagcccttactgtaacaaggccagagatctaggaggaaagactgacttca i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1374290 1044 + 1464242 Gtgagtgatttgccccatcccgttggtgataagggagtttttgctccattacttcacgtgagatctggttgtttaaaagtctgtggcacctcccccactctactctcctgctcctgctcttactccgggacctgccccctccccattcaacttctgccatggttgtcagcttcatgaggccctcaccagaagccaggcaggtgcaggagccatgcttatatagccagaagaaccgtgagccaattaaac-----ttcttttctgggtaaattaccaaatctcaggtatttctttatagcaatgtgaaaatggcctaacacagaaaattggtactgaggagtagggtgtttctataaagacacctgaaattgtggcagtggctttggaactgtgtaatggca-ggggttggaacagtttggagggctcagaagaagacagaaagacaagggaaagtttagaacttcctagagacttgccaaatgactgtgaccaaaatgctggtagaaataaggacagttaaggccaggctgacatggtctcagatggaaatgaggaacttactgggaactggaggtagaggtcgcctgtgctatgcctcagcaaagagcttggctgcattgtatccaagtcgtgggcatctatggaagtttgaactt-acgagtgatgacttggagtatctggcagaagaaatttctatgcagcaaagcattcaaggggtggtctggctgcttctaacaaccaaccatcagatatgagagcaaataaatgatttgtatttggaacttatatttaaaagggaagcagagcataaacatttggaaaatttgcaggctagccacctgatagaaaacaatatcctgttttcagggaaagaattaaagggggttgttggagtaaccatttactagagagactagcatgactaaaagggagccaagtgctactatccaagacaacaggaaaagggccttgaagaaagcatggtataagtcctcaggacagcccttactgtaacaaggccagagatctaggaggaaagaatgacttca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1098133 1027 + 81552678 gtgaatgatttgtcccatccccttt-----------gtttttgctcagttacttcacgtgagatctggttatttaaaagtctgtggcacctcccccactctactctcttgctcc----------ccgggacctgtccactccccattcaacttctgccatggttgtcagcttccggaggccctcaccagaagccaggcaggtgcaggagccatgcttatatagccagaagaaccgtgagccaattaaacttcttttcttttctgggtaaattaccaagtctcaggtatttcttcatagctctgtaaaaatggcctaacacagaaaattggtgcagaggagtggagtgtttctataaagatacctgaaattgtggcagcggctttggaactgtgtaatggcatggggttggaagagtttggagggctcagaagaagacagaaa-acaagggaaagtttagaacttcctagagacttgccaaatgactg-gaccaaaatgctggtagaaataaggacagtgaaggccaggctaacatggtctcagatggaaatgaggaacttactgggaactggaggtagaggttgcctgtgttatgccttagcaaagagcttggctgcactgtgtccaagtagtggggatctgtggaagtttgaactt-atgagtgatgacttggagtatctggcagaagaaatttctatgcagcaaagccttcaaagtgtggtctagctgcttctaacaaccaaccatcagatatgagagcaaagaaatgatttgtatttggaacttatacttaaaagggaagcagagcgtaaacacttggaaaatttgcagcctacccacctgatagaaaacaatatcctgttttcagggcaagaattaaagggggttgctggagtaaccatttgctagataaattagcatgactacaagggagccaaatgttgctatccaaggcaacaggaaaagagcctcgaagaaagcatgttataagtcctcaggacagcacttactgtaacaaggccagaggtctaggaggaaagaatggcttca i nomLeu3.chr19 I 246 C 0 s rheMac8.chr13 1429263 1037 + 108979918 gtgattgatttgccccatccccttggtgataagggagtttttgctcagttagttcacatgagatctggttgtttaaaagtctgtggcacctcccccactctgctctcttgctcc------------gggacctgtctactccccatccaagttcttgcatagttgtcagcttcctgaagccctcaccagaagccaggcaggtgcaggagcaatgcttatatagccagaagaaccgtgagccaattaaacttcttttcttttctgcatacattaccaaatctcgggtatttctttatagcaatgtgaaaatggcctaacacagaaaattggtactgaggagtggggtgtttctataaagatacctgaaattgtagcagtggctttggaactgtgtaatggca-ggggttggaagagtttggagggctcagaagaagacagaaagacaagggaaagtttagaacttcctagagacttgccaaatgactgtaaccaaaatgctgctagaaataaggacagtgaaggccaggctgacatggtgtcagatggaaatgaggaacttactaggaactggaggtagaggtcgcctgtgttatgccttagcaaagagcttggctgcattgtgtccaagttgtggggatctgtggaagtctgaactt-cagagtgatgacttggagtatctggcagaagaaatttctatgcagcaaagcattcaaggggtggtctagctgcttctaacaaccaaccatcagatatgagagcaaagaaatgatttgtatttggaacttatatttaaaagggaagcagagcataaacatttggaaaatttgcagcctacccacatgatagaaaacgagatcctgttttcagggaaagaattaaagggagcggctggagtaaccatttgctagagagattagcatggctaaaagggagctgagtgctactatccaagacaacaggaaaagggcctcgaagaaagcatgttgtaagtcctcaggacagcccctcccatcacaagcccagagatctaagaggaaagaatggcttca i rheMac8.chr13 I 255 I 7 s macFas5.chr13 1401639 1037 - 111193037 gtgattgatttgccccatccccttggtgataagggagtttttgctcagttagttcacatgagatctggttgtttaaaagtctgtggcacctcccccactctgctctcttgctcc------------ggtacctgtctactccccatccaagttcttgcatagttgtcagcttcctgaagccctcaccagaagccaggcaggtgcaggagcaatgcttatatagccagaagaaccgtgagccaattaaacttcttttcttttctgcatacattaccaaatctcgggtatttctttatagcaatgtgaaaatggcctaacacagaaaattggtactgaggagtggggtgtttctataaagatacctgaaattgtagcagtggctttggaactgtgtaatggca-ggggttggaagagtttggagggctcagaagaagacagaaagacaagggaaagtttagaacttcctagagacttgccaaatgactgtaaccaaaatgctgctagaaataaggacagtgaaggccaggctgacatggtgtcagatggaaatgaggaacttactaggaactggaggtagaggtcgcctgtgttatgccttagcaaagagcttggctgcattgtgtccaagttgtggggatctgtggaagtttgaactt-cagagtgatgacttggagtatctggcagaagaaatttctatgcagcaaagcattcaaggggtggtctagctgcttctaacaaccaaccatcagatatgagagcaaagaaatgatttgtatttggaacttatatttaaaagggaagcagagcataaacatttggaaaatttgcagcctacccacatgatagaaaacaagatcctgttttcagggaaagaattaaagggagcggctggagtaaccatttgctagagagattagcatgactaaaagggagctgagtgctactatccaagacaacaggaaaagggcctcgaagaaagcatgttgtaagtcctcaggacagcccctcccatcacaagcccagagatctaagaggaaagaatggcttca i macFas5.chr13 I 247 C 0 s macNem1.NW_012011978v1 1430019 1037 + 3644372 gtgattgatttgccccatccccttggtgataagggagtttttgctcagttagttcacatgagatctggttgtttaaaagtctgtggcacctcccccactctgctctcttgctcc------------gggacctgtctactccccatccaagttcttgcatagttgtcagcttcctgaagccctcaccagaagccaggcaggtgcaggagcaatgcttatatagccagaagaactgtgagccaattaaacttcttttcttttctgcatacattaccaaatctcgggtatttctttatagcaatgtgaaaatggcctaacacagaaaattggtactgaggagtggggtgtttctataaagatacctgaaattgtagcagtggctttggaactgtgtaatggca-ggggttggaagagtttggagggctcagaagaagacagaaaggcaagggaaagtttagaacttcctagagacttgccaaatgactgtaaccaaaatgctgctagaaataaggacagtgaaggccaggctgacatggtgtcagatggaaatgaggaacttactaggaactggaggtagaggtcgcctgtgttatgccttagcaaagagcttggctgcattgtgtctaagttgtggggatctgtggaagtttgaactt-cagagtgatgacttggagtatctggcagaagaaatttctatgcagcaaagcattcaaggggtggtctagctgcttctaacaaccaaccatcagatatgagaggaaagaaatgatttgtatttggaacttatatttaaaagggaagcagagcataaacatttggaaaatttgcagcctacccacatgatagaaaacaagatcctgttttcagggaaagaattaaagggagcggctggagtaaccatttgctagagagattagcatgactaaaagggagctgagtgctactatccaagacaacaggaaaagggcctcgaagaaagcatgttgtaagtcctcgggacagcccctcccatcacaagcccagagatctaagaggaaagaatggcttca i macNem1.NW_012011978v1 I 255 C 0 s cerAty1.NW_012000820v1 1383332 1028 - 10304083 gtgattgatttgccccatccccttggtgataagggagtttttgctcagttagttcacatgagatctggttgtttaaaagtctgtggcacctcccccactctgctctcttgctcc------------gggacctgtccactcgccatccaacttctgccatagttgtcagcttcctgaagccctcaccagaagccaggcaggtgcaggagcaatgcttatatagccagaagaaccgtgagccaattaaacttcttttcttttctgcatacattaccaaatctcgggtatttctttacagcaatgtgaaaatggcctaacacagaaaattggtactgaggagtggggtgtttctataaagatacctgaaatcgtagcagtggctttggaactgtgtaatgaca-ggggttggaagagtttggagggcccagaagaagacagaaagacaagggaaagtttagaacttcctagagacttgccaaatgactgtaaccaaaatgctgctagaaataaggacagtgaaggccaggccgacatggtctcagatggaaatgaggaacttactgggaactggaggtagaggtcgcctgtgttatgccttagcaaagagcttggctgcattgtgtccaagttgtggggatctgtggaagtttgaactt-cagagtgatgacttggagtatctggcagaagaaatttctatgcagcaaagcattcaaggggtggtctagctgcttctaacaaccaaccatcagatatgagagcaaagaaatgatttgtatttggaacttatatttaaaagggaagcagagcataaacatttggaaaatttgcagcctacccacatgatagaaaacaagatcctgttttcagggaaagaattaaagggagctgctggagtaaccatttgctagagagattagcatgactaaaagggagctgagtgctactatccaagacaacaggaaaagggcctcgaagaaagcatgttgtaagtcct---------ccctcccatcacaagcccagagatctaagaggaaagaatggcttca i cerAty1.NW_012000820v1 I 254 C 0 s manLeu1.NW_012103754v1 940772 1027 - 2200435 gtgattgatttgccccatccccttggtgataagggagtttttgctcagttagttcacatgagatctggttgtttaaaagtctgtggcacctcccccactctactctcttgctcc------------gggacctgtccactcgccatccaacttctgccatagttgtcagcttcctgaagccctcaccagaagccaggcaggtgcaggagcaatgcttatatagccagaagaaccgtgagccaattaaacttcttttcttttctgcatacattaccaaatctcgggtatttctttatagcaatgtgaaaatggcctaacacagaaaattggtactgaggagtggggtgtttctctaaagatacctgaaattgtagcagtggctttggaactgtgtaatggca-ggggttggaagagtttggagggcccagaagaagacagaaagacaagggaaagtttagaacttcctagagacttgccaaatgactgtaaccaaaatgctgctagaaataaggacagtgaaggccagggcgacatggtctcagatggaaatgaggaacttactgggaactggaggtagaggtcgcctgtgttatgccttagcaaagagcttggctgcattgtgtccaagtcgtggggatctgtggaagtttgaactt-cagagtgatgacttggagtatctggcagaagaaatttctatgcagcaaagcattcaaggggtggtctagctgcttctaacaaccaaccatcagatatgagagcaaagcaatgatttgtatttggaacttacatttaaaagggaagcagagcataaacatttggaaaatttgcagcctacccacatgatagaaaacaagatcctgttttcagggaaagaattaaagggagctgctggagtaaccatttgctagagggattagcatgactaaaa-ggagctgagtgctactatccaagacaacaggaaaagggcctcgaagaaagcatgttgtaagtcct---------ccctcccatcacaagcccagagatctaagaggaaagaatggcttca i manLeu1.NW_012103754v1 I 257 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e saiBol1.JH378218 1223775 346 - 7082604 I e cebCap1.NW_016107827v1 1311729 24 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1701250 3081 + 4416731 I e calJac3.chr14 1377923 66 - 108792865 I e colAng1.NW_012118821v1 1379459 2856 - 13651311 I e chlSab2.chr14 1459181 11342 - 107702431 I a score=34380.000000 s hg38.chr2_KI270774v1_alt 113197 10 + 223625 gagtctagac s panTro5.chr2A 1402236 10 + 111504155 gagtctagac i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1351081 10 + 114371477 gagtctagac i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1375334 10 + 1464242 gagtctagac i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1099160 10 + 81552678 gagtctagac i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1402676 10 - 111193037 gagtctagac i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1431056 10 + 3644372 gagtctagac i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1384360 10 - 10304083 gagtctagac i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 941799 10 - 2200435 gagtctagac i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e saiBol1.JH378218 1223775 346 - 7082604 I e cebCap1.NW_016107827v1 1311729 24 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1701250 3081 + 4416731 I e calJac3.chr14 1377923 66 - 108792865 I e colAng1.NW_012118821v1 1379459 2856 - 13651311 I e chlSab2.chr14 1459181 11342 - 107702431 I e rheMac8.chr13 1430300 7 + 108979918 I a score=3866399.000000 s hg38.chr2_KI270774v1_alt 113207 1000 + 223625 cttgggcctctttgtcctgtgcagcccagggacactgatccctgtatcccagctactctggctctgggcttggctcagaggggcccaggtactactcaagccacagcttgaacagtccaagccgtaagtgtctatagctttcacacggtgttcagccttcaggctcacagaatgcaggagttaaggaggcttagtagcttcccctagatttcagagaatccatgaaaaagccta-gtgcccaggtagaagcctacttcaggggcaaagccctctcagaatgactctactagggccatgctgagggggaatgtgaggttgaagcccccacacagagtgcccactgagacactgcttaatggagctgtgggaagggggccatcgccctgcagaccccagaattgtagatccaccagcagcttgcactctgcacctg-aaaaagcctcaagtgctcaactccaacccatgagagcagccaggtgggctgtgttcagggaagccacaggggcagagctgcccaaggctatgggagcccattcctcacaccagggtacaggacacggagtcaaaggagattgtttcagagctttaagattcaatgaattgcctgctgagtgtagactggtgtggggcctatcaagccttcctgttggctgatttctcccttttagaatgg-aaaaatatacccaatgctggtgcccccattgtatcttggaaacatataactgcttttttatctcagaggctcataggtagaaggacctcatctccagatgagactttggacttggga-ttttgagttaatgccagaataaattaagactttgggggactgttgcgaatgcgcaattgtattttggaatgtgagaaaggtgtgggatttgggggaac-gggtagaataataaggtgtagatgcttttcccccttaaatctcatgttaaaatgtgattctggatgttggagttgaggcctggtgagaggcgattggatcacaagggcaaat s panTro5.chr2A 1402246 1000 + 111504155 cttgggcctctttgtcctgtgcagcccagggacactgatccctgtattccagctactctggctctgggcttggctcagaggggcccaggtactactcaagccacagcttgaacagtccgagccgtaagtgtctatagctttcacacggtgttcagccttcaggctcacagaatgcaggagttaaggaggcttagtagcttcccctagatttcagagaatccatgaaaaagccta-gtgcccaggtagaagcctacttcaggggcaaagccctctcagaatgactctactagggccatgctgagggggaatgtgaggttgaagcccccacacagagtgcccactgagacactgcttaatggagctgtgggaagggggccatcgccccgcagaccccagaatggtagatccaccagcagcttgcactctgcacctg-aaaaagcctcaagtgctcaactccaacccatgagagcagccaggtgggctgtgttcagggaagccacaggggcagagctgcccaaggctatgggagcccattcctcacaccagggtacaggacacggagtcaaaggagattgtttcagagctttaagatttaatgaattgcctgctgagtgtagactggtgtggggcctatcaagccttcctgttggctgatttctcccttttagaatgg-aaaaatatacccaatgctggtgcccccattgtatcttggaaacatataactgcttttttatctcagaggctcataggtagaaggacctcatctccagatgagactttggacttggga-ttttgagttaatgccagaataaattaagactttgggggacagttgcgaaggcacagttgtattttggaatgtgagaaaggtgtgggatttgggggaac-gggtagaataataaggtgtagatgcttttcccccttaaatctcatgttaaaatgtgattctggatgttggaggtgaggcctggtgagaggtgattggatcacaagggcaaat i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1351091 1000 + 114371477 cttgggcctctttgtcctgtgcagcccagggacactgatccctgtatcccagctactctggctctgggcttggctcagaggggcccaggtactactcaagccacagcttgaacagtccgagccgtaagtgtctatagctttcacacggtgttcagccttcaggctcacagaatgcaggagttaaggaggcttagtagcttcccctagatttcagagaatccatgaaaaagccta-gtgcccaggtagaagcctacttcaggggcaaagccctctcagaatgactctactagggccatgctgagggggaatgtgaggttgaagcccccacacagagtgcccactgagacactgcttaatggagctgtgggaagggggccatcgccccgcagaccccagaatggtagatccaccagcagcttgcactctgcacctg-aaaaagcctcaagtgctcaactccaacccatgagagcagccaggtgggctgtgttcagggaagccacaggggcagagctgcccaaggctatgggagcccattcctcacaccagggtacaggacacggagtcaaaggagattgtttcagagctttaagatttaatgaattgcctgctgagtgtagactggtgtggggcctatcaagccttcctgttggctgatttctcccttttagaatgg-aaaaatatacccaatgctggtgcccccattgtatcttggaaacatataactgcttttttatctcagaggctcataggtagaaggacctcatctccagatgagactttggacttggga-ttttgagttaatgccagaataaattaagactttgggggacagttgcgaaggcacagttgtattttggaatgtgagaaaggtgtgggatttgggggaac-gggtagaataataaggtgtagatgcttttcccccttaaatctcatgttaaaatgtgattctggatgttggaggtgaggcctggtgagaggtgattggatcacaagggcaaat i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1375344 1000 + 1464242 cttgggcctctttgtcctgtgcagtccagggacactgatccctatatcccagctactctggctctgggcttggctcagaggggcccaggtactactcaagccacagcttgaacagtccaagccataagtgtctatagctttcacacggtgttcagccttcaggctcacagaatgcaggagttaaggaggcttagtagcttcccccagatttcagagaatgcatgaaaaagccta-gtgcccaggcagaagcctacttcaggggcaaagccctctcagaatgactctactagggccttgctgaggggaaatgtgaggttgaagcccccacacagagtgcccactgagacactgcttaatggagcagtgggaagggggccatcgccccgcagaccccagaatggtagatccaccagcagcttgcactctgcacctgaaaaaagcctcaagtgctcaactccgacccatgagagcagccagatgggctgtgttcaaggaagccacaggggcagagctgcccaaggccatgggagcccactcctcacaccagggtacaggacacggagtcaaaggagattgtttcagagctttaagatttaactaattgcctgctgagtgtagactggtgtggggcctatcaactcttcctgttggctgatttctcccttttagaatggaaaaaatatacccaatgctggtgcccccattgtatcttggaaacatataactgcttttttatctcagaggctcataggtagaaggacc-catctccagataagactttggacttggga-ttttgagttaatgccagaataaattaagacttt-ggggacagttgcgaaggcacagttgtattttggaatgtgagaaagacatgggatttgggggaac-gggtagaatgataaggggtagatgcttttccccctcaaatctcatgttaaaatgtgattccggatgttggaggtgaggcctggtgagaggcaagtggatcacaagggcaaat i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1099170 998 + 81552678 cttgggcctctttgtcctgtgcagcccagggacactaatccctatatcccagctactctggctctgggcttggctcagaggggcccaggtactactcaagccacagcttgaacagtacaagccataagtgactataactttcacatggtgttcagccttcaggctcacagaatgcaggagttaaggagacttggtggcttcccctagatttcagagaatgcatgaaaaagccta-gtgcccaggcagaagcctccttcaggggcaaagccctctcagaat-actctactagggccatgctgaggggaaatgtgaggttgaagcccccacacagagtgcccactgagacacggcttaatggagctgtgggaagggggccatcgccctacagaccccagaatggtagatccaccagcagcttacaccctgcacctg-aaaaagcctcaagtgctcaactccaacccatgagagcagccaggtgggctgtgttcaaggaagccacaggggcagagctgcccaaggccttgggagcccattccgcacaccagggtacaggacgcagagtcaaaggagattgtttccgagctttaagatttaacaaattgcctgctgagtatagactggtgtggggcctatcaaccctttctgtttgctgatttctcccttttagaatgg-aaaaatgtacccaatgttggtgcccccattgtatcttggaaacatataactgcttttttatctcagaggctcataggtagaaggact-catctccagatgagactttggacttgggacttttgagttaatgccagaataaattaagactttgggggactgttgcaaaggcacaattgtattttggaatgtgagaaagacatgggatttcggggaac-ggatagaatggtaaagtgtagatgctttt-cacctcaaatctcatgttaaaatgtgattccggatgttggaggtgaggcctggtgagaggcgagtggatcgtgagggcaaat i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1430307 1001 + 108979918 cttgggcctctttgtcctgtgcagcccggggacacagatccctatatcccagctgctctggctctgggcttggctcagaagggcccaggtactactcaagtcacagcttgaacagtccaagccatacgtgtctacagctttcacatggtgttcagccttcaggctcacagaatgcaagagttaaggagacttggtggcttcccctagatttcagagaatgcatgaacaagcctaggtgcccaggcagaagcctacttcaggggcaaagccctctcagaatgactctactagggccatgctgaggggaaatacgaggttgaagcccccacacagagtgcccactgagacactgcttaatggagctgtgagaaggaggccctcaccctgcagaccccggaatggtagatccaccagcagcttgcatcctgcaccag-aaaaagcctcaagtgctcaactccaaaccatgagagcagccaggtgggctgtattcaaggaagccaca-gggcagagctgcccaaggccttaggagtccattcctcacaccagggtacaggacacggagtcaaaggagattgttctggagctttaagatttatcgaattgtctactgagcgtagactggtgtggggcctataaaccctttctgttgactgatttctcccttttagaatgg-aaaaatatacccagtgctggtgccaccgttgtatcttggaaacatgtaactgtttttttatctcagaggctcataggtagaaggacctcatctccaggtgagactttggacttgggacttttgagttaatgccggaataaattaagactttgggggactgttgcgaaggcataattgtattttggaatgtgagaaagacatgggattcgggtgaacagggtagaaGgatatggtgtggatgctttt-tccctcaaatctcatgttaaaatgtgattctggatgttggagatgaggcctggtgagaggcaagtggatcacaagggcaaac i rheMac8.chr13 I 7 C 0 s macFas5.chr13 1402686 1001 - 111193037 cttgggcctctttgtcctgtgcagcccggggacacagatccctatatcccagctgctctggctctgggcttggctcagaagggcccaggtactactcaagtcacagcttgaacagtccaagccatacgtgtctacagctttcacatggtgttcagccttcaggctcacagaatgcaagagttaaggagacttggtggcttcccctagatttcagagaatgcatgaacaagcctaggtgcccaggcagaagcctacttcaggggcaaagccctctcagaatgactctactagggccatgctgaggggaaatacgaggttgaagcccccacacagagtgcccactgagacactgcttaatggagctgtgagaaggaggccctcaccctgcagaccccggaatggtagatccaccagcagcttgcatcctgcaccag-aaaaagcctcaagtgctcaactccaaaccatgagagcagccaggtgggctgtgttcaaggaagccaca-gggcagagctgcccaaggccttaggagtccattcctcacaccagggtacaggacacggagtcaaaggagattgttctggagctttaagatttatcgaattgtctactgagcgtagactggtgtggggcctataaaccctttctgttgactgatttctcccttttagaatgg-aaaaatatacccagtgctggtgccaccgttgtatcttggaaacatgtaactgtttttttatctcagaggctcataggtagaaggacctcatctccaggtgagactttggacttgggacttttgagttaatgccggaataaattaagactttgggggactgttgcgaaggcataattgtattttggaatgtgagaaagacatgggattcgggggaacagggtagaaGgatatggtgtggatgctttt-tccctcaaatctcatgttaaaatgtgattctggatgttggagatgaggcctggtgagaggcaagtggatcacaagggcaaac i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1431066 1001 + 3644372 cttgggcctctttgtcctgtgcagcccggggacacagatccctatatcccagctgctctggctctgggcttggctcagaaaggcccaggtactactcaagtcacagcttgaacagtccaagccatacgtgtctacagctttcacatggtgttcagccttcaggctcacagaatgcaagagttaaggagacttggtggcttcccctagatttcagagaatgcatgaacaaacctaggtgcccaggcagaagcctacttcaggggcaaagccctctcagaatgactctactagggccatgctgaggggaaatacgaggttgaagcccccacacagagtgcccactgagacactgcttaatggagctgtgagaaggaggccctcaccctgcagaccccggaatggtagatccaccagcagcttgcatcctgcaccag-aaaaagcctcaagtgctcaactccaaaccatgagagcagccaggtgggctgtgttcaaggaagccaca-gggcagagctgcccaaggccttaggagtccattcctcacaccagggtacaggacacggagtcaaaggagattgttctggagctttaagatttatcgaattgtctactgagcgtagactggtgtggggcctataaaccctttctgttgactgatttctcccttttagaatgg-aaaaatatacccagtgctggtgccaccgttgtatcttggaaacatgtaactgtttttttatctcagaggctcataggtagaaggacctcatctccaggtgagactttggacttgggacttttgagttaatgccggaataaattaagactttgggggactgttgcgaaggcataattgtattttggaatgtgagaaagacatgggattcgggggaacagggtagaaGgatatggtgtggatgctttt-cccctcaaatctcatgttaaaatgtgattctggatgttggagatgaggcctggtgagaggcaagtggatcacaagggcaaac i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1384370 1001 - 10304083 cttgggcctctttgtcctgtgcagcccagggacacagatccctagatctcagctgctctggctctgggcttggctcagaagggcccaggtactactcaagtcacagcttgaacagtccaagccataagtgtctacagctttcacatggtgttcagccttcaggctcacagaatgcaagagttaaggagacttggtggcttcccctagatttcagagaatgcatgaacaagcctaggtgcccaggcagaagcctacttcaggggcaaagccctctcagaatgactctactagggccatgctgaggggaaatacgaggttgaagcccccacacagagtgcccactgaaacactgcttaatggagctgtgagaaggaggccctcaccctgcaggccctggaatggtagatccaccagcagcttgcatcctgcaccag-aaaaagcctcaagtgctcaactccaaaccatgagagcagccaggtgggctgtgttcaaggaagccaca-gggcagagctgcccaaggccttaggcgtccattcctcacaccagggtacaggacacggagtcgaaggagattgttctggagctttaagatttatcgaattgtctactgagcatagactggtgtggggcctataaaccctttctgttgactgatttctgccttttagaatgg-aaaaatatacccaatgctggtgccaccgttgtatcttggaaacatgtaactgtttttttatctcagaggctcataggtagaaggacttcatctcccggtgagactttggacttgggacttttgagttaatgccgtaataaattaagactttgggggactgttgcgaaggcataattgtattttggaatgcgagaaagacatgggattcgggggaacagggtagaaGgatatggtgtggatgctttt-tccctcaaatctcatgttaaaatgtgattctggatgttggagatgaggcctggtgagaggcaagtggatcacaagggcaaac i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 941809 1001 - 2200435 cttgggcctctttgtcctgtgcagcccagggacacagatccctagatctcagctgctctggctctgggcttggctcagaagggcccaggtactactcaagtcacagcttgaacagtccaagccataagtgtctacagctttcacgtggtgttcagccttcaggctcacagaatgcaagagttaaggagacttggtggcttcccctacatttcagagaatgcatgaacaagcctaggtgcccaggcagaagcctacttcaggggcaaagccctctcagaatgactctactagggccatgctgaggggaaatacgaggttgaagcccccacacagagtgcccactgagacactgcttaatggagctatgagaaggaggccctcaccctgcagactccggaatggtagatccaccagcagcttgcatcctgcaccag-aaaaagcctcaagtgctcaactccaaaccatgagagcagccaggtgggctgtgttcaaggaagccaca-gggcagagctgcccaaggccttaggagtccattcctcacaccagggtacaggacacggagtcaaaggagattattctggagctttaagatttatcgaattgtctactgagcgtagactggtgtggggcctataaaccctttctgttgactgatttctcccttttagaatgc-aaaaatatacccaatgctggtgccaccgttgtatcttggaaacatgtaactgtttttttatctcagaggctcataggtagaaggacctcatctccaggtgagactttggacttgggacttttgagttaatgccggaataaattaagactttgggggactgttgcgaaggcataattgtattttggaatgtgagaaagacatgggattcgggggaacagggtagaaGgatatggtgtggatgctttt-tccctcaaatctcatgttaaaatatgattctggatgttggagatgaggcctggtgagaggcaagtggatcacaagggcaaac i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e saiBol1.JH378218 1223775 346 - 7082604 I e cebCap1.NW_016107827v1 1311729 24 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1701250 3081 + 4416731 I e calJac3.chr14 1377923 66 - 108792865 I e colAng1.NW_012118821v1 1379459 2856 - 13651311 I e chlSab2.chr14 1459181 11342 - 107702431 I a score=2172578.000000 s hg38.chr2_KI270774v1_alt 114207 482 + 223625 ccctgatgaatggtttagccccatcctcttggtgatgagtcagttcttgcccaggaagtccatgtgagacctggttgttttacgttgtgtggcacctgcccgcttgacctcttgctccttctctcaccatgtgagacacctgctcctgctgcaccttccaccatgactgtggcttcctgaggtctccccagaagccaagcagatcctgggtccatgtttgcacagcccgcagaaccttgagccaattaaatcccttttccttataaattacccattctcaggtatttctttacagcaatgcaaaaaataggttaacaAGTAAGCTTTTTAAAAATTTATTTTTattgtatgtatttctgatgtgcaaaatgatgttttgatatacaaatacataatgaaatgatcactaccgtcaaacaaagttaacatacccatcaccttccgtagtgattggtgtgtacatgtggtgagagcacttaaaa s panTro5.chr2A 1403246 482 + 111504155 ccctgatgaatggtttagccccatcctcttggtgatgagtcagttcttgcccaggaagtccatgtgagacctggttgttttacgttgtgtggcacctgcccgcttgacctcttgctccttctctcaccatgtgagacacctgctcctgctgcaccttccaccatgactgtggcttcccgaggtctccccagaagccaagcagatcctgggtccatgtttgcacagcccgcagaaccttgagccaattaaatcccttttccttataaattacccattctccggtatttctttacagcaatgcaaaaaataggttaacaAGTAAGCTTTTTAAAAATTTATTTTTattgtatatatttctgatgtgcaaaatgatgttttgatatacaaatacataatgaaatgatcactaccgtcaaacaaaattaacatacccatcatcttccgtagtgattggtgtgtacatgtggtgagagcacttaaaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1352091 482 + 114371477 ccctgatgaatggtttagccccatcctcttggtgatgagtcagttcttgcccaggaagtccatgtgagacctggttgttttacgttgtgtggcacctgcccgcttgacctcttgctccttctctcaccatgtgagacacctgctcctgctgcaccttccaccatgactgtggcttcccgaggtctccccagaagccaagcagatcctgggtccatgtttgcacagcccgcagaactttgagccaattaaatcccttttccttataaattacccattctccggtatttctttacagcaatgcaaaaaataggttaacaAGTAAGCTTTTTAAAAATTTATTTTTattgtatatatttctgatgtgcaaaatgatgttttgatatacaaatacataatgaaatgatcactaccgtcaaacaaaattaacatacccatcaccttccgtagtgattggtgtgtacatgtggtgagagcacttaaaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1376344 481 + 1464242 ccctgatgaatggtttagccccatcctcttggtgatgagtcagttcttgcccaggaagtccatgtgagacctggttgttttatgttgtgtggcacctgcccgcttgacctcttgctccatctctcaccatgtgagacacctgctcctgctgcaccttccaccatgactgttgcttcctgaggtct-cccagaagccaagcagatcctgggtccatgtttgcacagcccacagaaccttgagccaattaaatcccttttccttataaattacccattctcaggtatttctttacagcaatgcaaaaaataggttaacaAGTAAGCTTTTTAAAAATTTATTTTTattgtatatatttccgatgtgcaaaatgatgttttgatatacaaatacataatgaaatgatcactaccgtcaaacaaaattaacatacccatcaccttccatagtgattggcgtgtacgtgtggtgagagcacttaaaa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1100168 481 + 81552678 ccctgatgaatggtttagccccatcctcttggtgatgagtcagttcttgcccaggaagtccatgtgagacctggttgttttacgttgtgtggcacctgcccgcttgacctcttgctccttctcttaccatgtgagacacctgctcctgctgcactgtccaccatgactgtggcttcctgaggcctccccagaagccaagcagatcctgggtccatgtttgcacagcctgcaggaccttgagccaattgaatcccttttccttgtaaattacccagtctcaagtatttctttacagcaatgc-aaaaataggttaacaAGTAAGCTTTTTAAAAATTTATTTTTGTAgtatatatttccgatgtgcaaaatggtgttttgatatacaaatacataatgaaatgatcactaccgttaaacaaaattaatatacccatcaccttccatagtgattggtgtgtatgtgtggtgagagcacttaaaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1431308 473 + 108979918 cccttatgaatggtttagccccattctcttggtgatgagtcagttctcgcccaggaggtccatgtgagacgtggttgttttacactgtgtggcacctgcccgcttgacctcttgctccttctctcaccatgtgaggcacctgctcccgctgcaccttccaccatgattgtggcttcctgaggcctccccagaagccaagcaggtgctcggtccgtgtttgcgcagcctgcagaaccttgagccaattaaatcccttttctttataaattacccagcctcaagtatttctttagagcaatgc-aaaaatagcttcacaTGTAAGCTTTAACAATTTTTATTTTTGttgtatatgtttcacatttgcaaaatgatgttttg--------atacataatgaagtgatcactaccatcaaacaaaattaacgtacccatcaccttccatggtgattggtgtctacgtgtggtgagagcacttaaaa i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1403687 473 - 111193037 cccttatgaatggtttagccccattctcttggtgatgagtcagttctcgcccaggaggtccatgtgagacgtggttgttttacactgtgtggcacctgcccgcttgacctcttgctccttctctcaccatgtgaggcacctgctcccgctgcaccttccaccatgattgtggcttcctgaggcctccccagaagccaagcaggtgctcggtccgtgtttgcgcagcctgcagaaccttgagccaattaaatcccttttctttataaattacccagcctcaagtatttctttagagcaatgc-aaaaatagcttcacatgtaagctttaaCAATTTTTATTTTTGttgtatatgtttcagatttgcaaaatgatgttttg--------atacataatgaagtgatcactaccatcaaacaaaattaacgtacccatcaccttccatggtgattggtgtctacgtgtggtgagagcacttaaaa i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1432067 473 + 3644372 cccttatgaatggtttagccccattctcttggtgatgagtcagttctcgcccaggaggtccatgtgagacgtggttgttttacactgtgtggcacctgcccgcttgacctcttgctccttctctcaccatgtgaggcacctgctcccgctgcaccttccaccatgattgtgacttcctgaggcctcctcagaagccaagcaggtgctcggtccgtgtttgcgcagcctgcagaaccttgagccaattaaatcccttttctttataaattacccagcctcaagtatttatttagagcaatgc-aaaaatagcttcacaTGTAAGCTTTAACAATTTTTATTTTTGttgtatatgtttcagatttgcaaaatgatgttttg--------atacataatgaagtgatcactaccatcaaacaaaattaacgtacccatcaccttccatggtgattggtgtctacgtgtggtgagagcacttaaaa i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1385371 473 - 10304083 cccttatgaatggtttagccccattctcttggtgatgagtcagttctcgcccaggaggtccatgtgagacgtgattgttttacactgtgtggcacctgcccgcttgacctcttgctccttctctcaccatgtgaggcacctgctcccgctgcaccttccaccatgattgtggcttcctgaggcctccccggaagccaagcaggtgctgggtccgtgtttgcacagcctgcagaaccttgagccaattaaatcccttttctttataaattacccagtctcaagtatttctttatagcaatgc-aaaaacagcttaacaTGTAAGCTTTAAAAATTTTTATTTTTGttgtatatgtttcagatttgcaaaatgatgttttg--------atacataatgaagtgatcactagtgtcaaacaaaattaacgtacccgtcaccttccatagtgattggtgtctacgtgtggtgagagcacttaaaa i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 942810 473 - 2200435 cccttatgaatggtttagccccattctcttggtgatgagtcagttctcgcccaggaggtccatgtgagacgtgattgttttacactgtgtggcacctgcccgcttgatctcttgctccttctctcaccatgtgaggcacctgctcccgctgcaccttccaccatgattgtggcttcctgaggcctccccggaagccaagcaggttctgggtccgtgtttgcacagcctgcagaaccttgagccaattaaatcccttttctttataaattacccagtctcaagtatttctttatagcaatgc-aaaaacagcttaacaTGTAAGCTTTAAAAATTTTTATTTTTGttgtatatgtttcagatttgcaaaatgatgttttg--------atacataatgaagtgatcactaccgtcaaacaaaattaacgtacccgtcaccttccatagtgattggtgtctacgtgtggtgagagcacttaaaa i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1382315 473 - 13651311 cccttatgaacggtttagccctgtcctcttggtgatgagtcggttctcgccgaggaggtccatgtgagacgtggttgttttacactgtgtggcacctgcccgcttgacctcttgctccttgtctcaccatgtgaggcatctgctcccgctgcaccttccaccatgattgtggcttcctgaggcctccccagaagccaagcaggtgctgggtccgtgtttgcacagcctgcagaactttgagccaattaaatcccttttctttataaattacccagtctcaagtatttctttagagcaacgc-aaaaacagcttaataTGTAAGCTTTAACAATTTTTATTTTTattgtatatatttcagatttgcaaaatgatgttttg--------atacataatgaaatgatcactatcgtcaaacaaaattaacgtacccatcaccttccatagtgattggtgtctacgtgtggtgagagcacttacaa i colAng1.NW_012118821v1 I 2856 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e saiBol1.JH378218 1223775 346 - 7082604 I e cebCap1.NW_016107827v1 1311729 24 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1701250 3081 + 4416731 I e calJac3.chr14 1377923 66 - 108792865 I e chlSab2.chr14 1459181 11342 - 107702431 I a score=259572.000000 s hg38.chr2_KI270774v1_alt 114689 46 + 223625 tctctcttagcacattagtttttagtatccaatattattaactaCG s panTro5.chr2A 1403728 46 + 111504155 tctctcttagcacattcgtttttagtattcaatattattaactaCG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1352573 46 + 114371477 tctctcttagcacattcgtttttagtattcaatattattaactaCG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1376825 46 + 1464242 tctctcttagcacattagtttttagtattcaatattattaactaCG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1100649 46 + 81552678 tctctcttagcacattagtttttagtgttcaatattattaactatg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1431781 46 + 108979918 tctctcgtagcacatttgtttttagtattcaatattattaactatg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1404160 46 - 111193037 tctctcgtagcacatttgtttttagtattcaatattattaactatg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1432540 46 + 3644372 tctctcgtagcacatttgtttttagtattcaatattattaactatg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1385844 46 - 10304083 tctctcttagcacatttgtctttagtattcaatattattaactatg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1470523 46 - 107702431 TCTCTCTTAGCACATTTGTTTTTAGTATTCAATATTATTAACTATG i chlSab2.chr14 I 11342 C 0 s manLeu1.NW_012103754v1 943283 46 - 2200435 tctctcttagcacgtttgtctttagtattcaatattattaactatg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1382788 46 - 13651311 tctctcttagcacatttgtttttagtattcaatattattaactatg i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e saiBol1.JH378218 1223775 346 - 7082604 I e cebCap1.NW_016107827v1 1311729 24 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1701250 3081 + 4416731 I e calJac3.chr14 1377923 66 - 108792865 I a score=1366296.000000 s hg38.chr2_KI270774v1_alt 114735 228 + 223625 GAAGGAAT----ACAAGTGCTTAGCACAGCACCTAAAACTTTATTTTCACTCAGTAAGCACTATGTATTTTGGGGTTATTATTAATAAACAAAAATATAAACAATGCATTTAATTATGGC----AGAACAACTGAAGAGAACAACTAGGTCACTTTT-CCCAAAGCCACAGTA-GGTGATTCTGAGCC----CTGAGCCTCATGTCTAACTTGCAGAGGGAAGGAGGTTCTCCTGCCAGCTC s panTro5.chr2A 1403774 228 + 111504155 GGAGGAAT----ACAAGTGCTTAGCACAGCACCTAAAACTTTATTTTCACTCAGTAAGCACTATGTATTTTGGGGTTATTATTAATAAACAAAAATATAAACAATGCATTTAATTATGGC----AGAACAACTGAAGAGAACAACTAGGTCACTTTT-CCCAAAGCCACAGTG-GGTGATTCTGAGCC----CTGAGCCTCATGTCTAACTTGCAGAGGGAAGGAGGTTCTCCTGCCAGCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1352619 228 + 114371477 GGAGGAAT----ACAAGTGCTTAGCACAGCACCTAAAACTTTATTTTCACTCAGTAAGCACTATGTATTTTGGGGTTATTATTAATAAACAAAAATATAAACAATGCATTTAATTATGGC----AGAACAACTGAAGAGAACAACTAGGTCACTTTT-CCCAAAGCCACAGTG-GGTGATTCTGAGCC----CTGAGCCTCATGTCTAACTTGCAGAGGGAAGGAGGTTCTCCTGCCAGCTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1376871 228 + 1464242 GAAGGAAT----ACAAGTGCTTAGCACAGCACCTAAAACTTTATTTTCACTCAGTAAGCACTATGTATTTTGGGGTTATTATTAATAAACAAAAATATAAACAATTCATTTAATTATGGC----AGAACAACTGAAGAGAACAACTAGGTCACTTTT-CCCAAAGCCACAGTG-GGTGATTCTGAGCC----CTGAGCCTCATGTCTAACTTGCAGAGGGAAGGAGGTTCTCCTGCCAGCTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1100695 212 + 81552678 gAAGGAAT----ACAAGTGCTTAGCACAGCACCTAAAACTTTATTTTCATTCAGTAAGCACTAGGTATTTT---GTTATTATTAATAAACAAAAATATAAACAATCCATTTAATTACGGC-----------------AGAACAACTAGGTCACTTTT-CCCAAAGCCACAGTG-GGTGATTCTGAGCC----CTGAGCCTCATGTCTAACTTGCAGAGGGAAGGAGGTTCTCCTGCCAGCTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1431827 227 + 108979918 gAAGGAAT----ACAAGTGCTTAGCACAGCACCTGAAACTTTACTTTCACT-AGTAAGCACTATGTATTTTGGGATTATTATTAATAAACAAAAATATAAACTATCCATTTAATTATGGC----AGAACAACTGAAGAGAACAACTAGGTCACTTTT-CCCAAAGCCACAGTG-GGTGATTCTGAGTC----CTGAGCCTCATGTCTAACTTGCAGAGGGAAGGAGGTTCTCCTGCCAGCTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1404206 227 - 111193037 gAAGGAAT----ACAAGTGCTTAGCACAGCACCTGAAACTTTACTTTCACT-AGTAAGCACTATGTATTTTGGGATTATTATTAATAAACAAAAATATAAACAATCCATTTAATTATGGC----AGAACAACTGAAGAGAACAACTAGGTCACTTTT-CCCAAAGCCACAGTG-GGTGATTCTGAGTC----CTGAGCCTCATGTCTAACTTGCAGAGGGAAGGAGGTTCTCCTGCCAGCTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1432586 227 + 3644372 gAAGGAAT----ACAAGTGCTTAGCACAGCACCTGAAACTTTACTTTCACT-AGTAAGCACTATGTATTTTGGGATTATTATTAATAAACAAAAATATAAACAATCCATTTAATTATGGC----AGAACAACTGAAGAGAACAACTAGATCACTTTT-CCCAAAGCCACAGTG-GGTGATTCTGAGTC----CTGAGCCTCATGTCTAACTTGCAGAGGGAAGGAGGTTCTCCTGCCAGCTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1385890 223 - 10304083 gAAGGAAT----ACAAGTGCTTAGCACAGCACCTGAAACTTTATGTTCACT-TGTAAGCACTATGTATTTTGGGATTATTATTAAT----AAAAATATAAACAATCCATTTAATTATGGC----AGAACAACTGAAGAGAACAACTAGGTCACTTTT-CCCAAAGCCACAGTG-GGTGATTCTGAGTC----CTGAGCCTCATGTCTAACTTGCAGAGGGAAGGAGGTTCTCCTGCCAGCTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1470569 223 - 107702431 GAAGGAAT----ACAAGTGCTTAACACCACACTTAAAACTTTATTTTCACT-TGTAAGCACTATGTATTTTGGGATTATTATTAAT----AAAAATATAAACAATCCATTTAATTATGGC----AGAACAACTGAAGAGAACAACTAGGTCACTTTT-CCCAAAGCCACAGTG-GGTGATTTGGAGTC----CCGAGCCTCATGTCTAACTTGCAGAGGGAAGGAGGTTCTCCTGCCAGCTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 943329 223 - 2200435 gAAGGAAT----ACAAGTGCTTAGCACAGCACCTGAAACTTTATGTTCACT-TGTAAGCACTGTGTATTTTGGGATTATTATTAAT----AAAAATATAAACAATCCATTTAATTATGGC----AGAACAACTGAAGAGAACAACTAGGTCACTTTT-CCCAAAGCCACAGTG-GGTGATTCTGAGTC----CTGAGCCTCATGTCTAACTTGCAGAGGGAAGGAGGTTCTCCTGCCAGCTC i manLeu1.NW_012103754v1 C 0 M 4534 s colAng1.NW_012118821v1 1382834 227 - 13651311 gAAGGAAT----ACAAGTGCTTAGCACAGCACCTGAAACTTTATGTTCACG-AGTAAGCACTATGTATTTTGGGGTTATTATTAATAAACAAAAATATAAACAATCCATTTAATTATGGC----AGAACAACTGAAGAGAACAACTAGGTCACTTTT-CCCAAAGCCACAGTG-GGTGCTTCTGAGTC----CTGAGCCTCATATCTCACTTGCAGAGGGAAGTAGGTTCTCCTGCCAGCTC i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1704331 242 + 4416731 gaagtaatataaataagtgcttgagatagcatttgacacatCATTTTTATTCAGAAAATCCTATATATTTTTTAGCTATTATTAAAAATGAAAAAGATAAATAATCCATTTCATTATGGCTAGCAGAAAAAATGAAAAGAAAAATTAGATTGTTTTTCCCCCAAGTTATCCTGCTGTGATTCTGGGCCCATTCTGAGCCACAACTCTACTGGACAGCAGTAAGGGGATTTTCCCGTCAGCTC i dasNov3.JH576208 I 3081 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e saiBol1.JH378218 1223775 346 - 7082604 I e cebCap1.NW_016107827v1 1311729 24 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e calJac3.chr14 1377923 66 - 108792865 I a score=163613.000000 s hg38.chr2_KI270774v1_alt 114963 62 + 223625 TGTAGTTCTGTCTGGCGTCTGACACTCGCACACCTGCCAACACCTCCCCAACTCTACTCTCT s panTro5.chr2A 1404002 62 + 111504155 TGTAGTTCTGTCTGGCGTCTGACACTCGCACACCTGCCAACACCTCCCCCACTCTACTctct i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1352847 62 + 114371477 TGTAGTTCTGTCTGGCGTCTGACACTCGCACACCTGCCAACACCTCCCCCACTCTACTctct i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1377099 62 + 1464242 TGTAGTTCTGTCTGGCGTCTGACACTCGCACACCTGCCAACACCTCCCCCACTCTACTCTCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1100907 62 + 81552678 CGTAGTTCTGTCTGGCCTCTGACACTCGCACACCTGCCAACACCTCCCCCACTCTACTCTCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1432054 38 + 108979918 CGTAGTTCTGCCTGGCCTCTGACACTCTCACACCTCCC------------------------ i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1404433 38 - 111193037 CGTAGTTCTGCCTGGCCTCTGACACTCTCACACCTCCC------------------------ i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1432813 38 + 3644372 CGTAGTTCTGCCTGGCCTCTGACACTCTCACACCTCCC------------------------ i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1386113 38 - 10304083 CGTAGTTCTGCCTGGCCTCTGACACTCTCACACCTCCC------------------------ i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1470792 38 - 107702431 CATAGCTCTGCCTGGCCTCTGACACTCACACACCTCCT------------------------ i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1383061 38 - 13651311 CGTAGTTCTGCCTGGCCTCTGACACTCGCACACCTCCC------------------------ i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1704573 56 + 4416731 CTGAATTCTTCCAGGCCCTTGCCACATGTATATCTGCT------TCTGTAACTTAGCTCCCT i dasNov3.JH576208 C 0 I 274 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e saiBol1.JH378218 1223775 346 - 7082604 I e cebCap1.NW_016107827v1 1311729 24 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e calJac3.chr14 1377923 66 - 108792865 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M a score=35346.000000 s hg38.chr2_KI270774v1_alt 115025 52 + 223625 TGCTCCTGCTCTTGCTCTAGGACCTGTCCACTCACACACCTGCGGTGGTCAC s panTro5.chr2A 1404064 52 + 111504155 tgctcctgctcttgctccaggacctgtccACTCACACACCTGCCGTGGTCAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1352909 52 + 114371477 tgctcctgctcttgctccaggacctgtccACTCACACACCTGCCGTGGTCAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1377161 52 + 1464242 TGCTCCTGCTCTTGCTCTAGGACCTGTCCACTTACACATCTGCCGTGGTCAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1100969 52 + 81552678 TGTTCCTGCTCTTGCTCCGGGACCTGTCCACTCACACACCTGCCATGGTCAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1432092 8 + 108979918 --------------------------------------------CTGGTCAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1404471 8 - 111193037 --------------------------------------------CTGGTCAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1432851 8 + 3644372 --------------------------------------------CTGGTCAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1386151 8 - 10304083 --------------------------------------------GTGGTCAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1470830 8 - 107702431 --------------------------------------------GTGGTCAC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1383099 8 - 13651311 --------------------------------------------GTGGTCAC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e saiBol1.JH378218 1223775 346 - 7082604 I e cebCap1.NW_016107827v1 1311729 24 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1704629 274 + 4416731 I e calJac3.chr14 1377923 66 - 108792865 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M a score=2041692.000000 s hg38.chr2_KI270774v1_alt 115077 416 + 223625 TTGGGCAGTGCTGGCCT---CCTGTCAGCTGGAGAGGCCCCG--CCCTGCAGGCGACTCAGCCAGGGCAGCTGTCTGG-----AGCCCCCAGAGCACAGTCCGCTGTGGTCACTCTGCTTCTTC-TTTGAGGCCTGGCCC-TGCCAGC-TTTGCTGCCAAAGGTGATTGACTCAACATTCAGAC----------------------AAGAAGGATGGTGAACTTGATGTAGTCCTCCCTTGGGTC--CTGGGGACTCAGT-AATTCCATTCTGCAGGTGCCTGGACAATGC------TCTGATCCACCCAGGTGTTG----GCAGCATTGTTGCAAAGGTCACCTCTGTGCTTTCTCTCCAGGTTCCCC-AGGTCCTCAAATGCTAGTAGGCAAGCCAGTTGTGAAA----CCTTGGATTGGTTCCGTGTA---GCTGCTGCTGCTGAGAATCTAAAAAGGCCAGGTGCTTG s panTro5.chr2A 1404116 416 + 111504155 TTGGGCAGTGCTGGCCT---CCTGTCAGCTGGAGAGGCCCCG--CCCTGCAGGCGACTCAGCCAGGGCAGCTGTCTGG-----AGCCCCCAGAGCACAGTCCGCTGTGGTCACTCTGCTTCTTC-TTTGAGGCCTGGCCC-TGCCAGC-TTTGCTGCCAAAGGTGATTGACTCAACACTCAGAC----------------------AAGAAGGATGGTGAACTTGATGTAGTCCTCCCTTGGGTC--CTGGGGACTCAGT-AATTCCATTCTGCAGGTGCCTGGACAATGC------TCTGATCCACCCAGGTGTTG----GCAGCATTGTTGCAAAGGTCACCTCTGTGCTTTCTCTCCAGGTCCCCC-AGGTCCTCAAATGCTAGTAGGCAAGCCAGTTGTGAAA----CCTTGGATTGGTTCCGTGTA---GCTGCTGCTGCTGAGAATCTAAAAAGTCCAGGTGCCTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1352961 416 + 114371477 TTGGGCGGTGCTGGCCT---CCTGTCAGCTGGAGAGGCCCCG--CCCTGCAGGCGACTCAGCCAGGGCAGCTGTCTGG-----AGCCCCCAGAGCACAGTCCGCTGTGGTCACTCTGCTTCTTC-TTTGAGGCCTGGCCC-TGCCAGC-TTTGCTGCCAAAGGTGATTGACTCAACACTCAGAC----------------------AAGAAGGATGGTGAACTTGATGTAGTCCTCCCTTGGGTC--CTGGGGACTCAGT-AATTCCATTCTGCAGGTGCCTGGACAATGC------TCTGATCCACCCAGGTGTTG----GCAGCATTGTTGCAAAGGTCACCTCTGTGCTTTCTCTCCAGGTTCCCC-AGGTCCTCAAATGCTAGTAGGCAAGCCAGTTGTGAAA----CCTTGGATTGGTTCCGTGTA---GCTGCTGCTGCTGAGAATCTAAAAAGGCCAGGTGCCTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1377213 416 + 1464242 TTGGGCAGTGCTGGCCT---CCTGTCAGCTGGAGAGGCCCCG--CCCTGCAGGCGACTCAGCCAGGGCAGCTGTCTGG-----AGCCCCCAGAGCACAGTCCGCTGTGGTCACTCTGCTTCTTC-TTTGAGGCCTGGCCC-TGCCAGC-TTTGCTGCCAAAGGTGATTGACTCAACGCTCAGAC----------------------AAGAAGGATGGTGAACTTGATGTAGTCCTCCCTTGGGTC--CTGGGGACTCAGT-AATTCCATTCTGCAGGTGCCTGGACAATGC------TCTGATCCACCCAGGTGTTG----GCAGCATTGTTGCAAAGGTCACCTCTGTGCTTTCTCTCCAGGTTCCCC-AGGTCCTCAAATGCTAGTAGGCAAGCCAGTTATGAAA----CCCTGGATTGGTTCCGTGTA---GCTGCTGCTGCTGAGAATCTAAAAAGGCCAGGTGCCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1101021 412 + 81552678 TTGGGCAGTGCTGGCCT---CCTGTCAGCTGGAGAGGCCCCG--CCCTGCAGGCGACT----CAGGGCAGCTGTCTGG-----AGCCCCCAGAGCACAGTCCGCTGTGGTCACTCTGCTTCTTC-TTTGAGGCCTGGCCC-TGCCAGC-TTTGCTGTCAAAGGTGGTTGACCCAACGCTCAGAC----------------------AAGAAGGATGGTGAACTTGATGTAGTCCTCCCTTGGGTC--CTGGGGACTCAGT-AATTCCATTCTGCAGGTGGTTGGACAATGC------TCTGATCCACCCAGGTGTTG----GCAGCAATGTTGCAAAGGTCACCTCTGTGCTTTCTCTCTAGGTTCCCC-AGGTCCTCAAATGCTAGTAGGCAGGCCCACTGTGAAA----CTTTGGATTGGTTCCCTGTA---GCTGCTGCTGCTGAGAATCTAAAAAGGCCAGGTGCCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1432100 417 + 108979918 TTGGGCAGTGCTGGCCT---CCTGTCAGCTGGAGAGGCCCCA----CTGCAGATGACTCAGCCAGGGCAGCTGTCTGC-----AGCCCCCAGAGCGCAGTCCGCTGTGGTCACTCTGCTTCTCC-TTTGGGGCCTGGCCC-TGCCAGC-TTTGCTGTCAAAGGTGATTGACTCAACCCTCAGGC----------------------AAGAAGGATGGTGAACCTGATGTAGTCCTCCCTTGGGCC--CTGGGGACTCAGT-AATTCCACTTGGCAGGTGCTTGGACAATGC------TCTGATCCACCCAGGTGTTG----GCAGCATTGTTGCAAAGGTCACCTCTGTCCTTTCTCTCCAGGTTCCCC-AGGTTCCCAAATGCTAGTAGGCAGGTCAACTGTGAAA----CCTTGGATTGGTTCCCTGTAGCTGCTGCTGCTGCTGGGAATCTAAAAAGGTCAGGTGCCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1404479 417 - 111193037 TTGGGCAGTGCTGGCCT---CCTGTCAGCTGGAGAGGCCCCA----CTGCAGATGACTCAGCTAGGGCAGCTGTCTGC-----AGCCCCCAGAGCGCGGTCCGCTGTGGTCACTCTGCTTCTCC-TTTGGGGCCTGGCCC-TGCCAGC-TTTGCTGTCAAAGGTGATTGACTCAACCCTCAGGC----------------------AAGAAGGATGGTGAACCTGATGTAGTCCTCCCTTGGGCC--CTGGGGACTCAGT-AATTCCACTTGGCAGGTGCTTGGACAATGC------TCTGATCCACCCAGGTGTTG----GCAGCATTGTTGCAAAGGTCACCTCTGTCCTTTCTCTCCAGGTTCCCC-AGGTTCCCAAATGCTAGTAGGCAGGTCAACTGTGAAA----CCTTGGATTGGTTCCCTGTAGCTGCTGCTGCTGCTGGGAATCTAAAAAGGTCAGGTGCCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1432859 417 + 3644372 TTGGGCAGTGCTGGCCT---CCTGTCAGCTGGAGAGGCCCCA----CTGCAGATGACTCAGCCAGGGCAGCTGTCTGC-----AGCCCCCAGAGCGCAGTCCGCTGTGGTCACTCTGCTTCTCC-TTTGGGGCCTGGCCC-TGCCAGC-TTTGCTGTCAAAGGTGATTGACTCAACCCTCAGGC----------------------AAGAAGGATGGTGAACCTGATGTAGTCCTCCCTTGGGCC--CTGGGGACTCAGT-AATTCCACTTGGCAGGTGCTTGGACAATGC------TCTGATCCACCCAGGTGTTG----GCAGCATTGTTGCAAAGGTCACCTCTGTCCTTTCTCTCCAGGTTCCCC-AGGTTCCCAAATGCTAGTAGGCAGGTCAACTGTGAAA----CCTTGGATTGGTTCCCTGTAGCTGCTGCTGCTGCTGGGAATCTAAAAAGGTCAGGTGCCTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1386159 417 - 10304083 TTGGGCAGTGCTGGCCT---CCTGTCAGCTGGAGAGGCCCCA----CTGCAGATGACTCAGCCAGGGCAGCTGTCTGG-----AGCCCCCAGAGCGCAGTCCGCTGTGGTCACTCTGCTTCTCC-TTTGGGGCCTGGCCT-TGCCAGC-TTTGCTGTCAAAGGTGATTGACTCAACCCTCAGGC----------------------AAGAAGGATGGTGAACCTGATGTAGTCCTCCCTTGGGTC--CTGGGGACTCAGT-AATTCCACTTGGCAGGTGCTTGGACAATGC------TCTGATCCACCCAGGTGTTG----GCAGCATTGTTGCAAAGGTCACCTCTGTCCTTTCTCTCCAGGCTCCCC-AGGTTCCCAAATGCTAGTAGGCAGGTCAACTGTGAAA----CCTTGGATTGGTTCCCTGTAGCTGCTGCTGCTGCTGGGAATCTAAAAAGGTCAGGTGCCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1470838 416 - 107702431 TT-GGCAGTGCTGGCCT---CCTGTCAGCTGGAGAGGCCCCA----CTGCAGACAACTCAGCCAGGGCAGCTGCCTGG-----AGCCCCCAGAGCGCAGTCCACTGTGGTCACTCTGCTTCTCC-TTTGGGGCCTGGCCC-TGCCAGC-TTTGCTGTCAAAGGTGATTGACTCAACCCTCAGGC----------------------AAGAAGGATGGTGAACCTGATGTAGTCCTCCCTTGGGTC--CTGGGGACTCAGT-AATTCCACTTTGCAGGTGCTTGGACAATGC------TCTGATCCACCCAGGTGTTG----GCAGCGTTGTTGCAAAGGTCACCTCTGTCCTTTCTCTCCAGGTTCCCC-AGGTTCCCAAATGCTAGTAGGCAGGTCAACTGTGAAA----CCTTGGATTGGTTCCCTGTAGCTGCTGCTGCTGCTGGGAATCTAAAAAAGTCAGGTGCCTG i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1383107 417 - 13651311 TTGGGCAGTGCTGGCTT---CCTGTCAGCTGGAGAGGCCCCA----CGGCAGACGACTCAGCCAGGGAAGCTGTCTGG-----GGCCCCCAGAGCGCAGTCCGCTGTGGTCACTCTGCTTCTCC-TTTGGGGCCTGGCCC-TGCCAGC-TTTGCTGTCAAAGGTGATTGACTCAACCCTCAGAC----------------------AAGAAGGATGGTGAACCTGATGTAGTCCTCCCTTGGGTC--CTGGGGACTTAGT-AATTCCACATTGCAGGTGCTTGGACAATGC------TCTGATCCACCCAGGTGTTG----GCAGCATTGTTGCAAAGGTCACCTCTGTCCTTTCTCTCCAGGTTCCCC-AGGTTCCCAAATGCTAGTAGGCAGGTCAACTGTGAAA----CCTTGGATTGGTTCCCTGTAGCTGCTGCTGCTGCTGGGAATCTAAAAAGGCCAAGTGCCTG i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1704903 438 + 4416731 tTGGCCTCTGCAGGCCTGTCCCTCTCACTTTTAGGAGCCCTCAGTTCTGTTGGTGAAACAGCCAGGGCAGTGGAGTGGTGGCAAGTGCCTGGAACAGAGGCAGTTCTAGT-ATTCTACCCCTCAGTCTAGTGCCTGGACTGTGCCAAAGTTTCTTTCCAAAGGTGGCCAACTCATCCTCCCAACTTTGGTCTACTCCAGCTGTTCTTGCAAAAACAGTGGACCAAAGAGAA---------GGGTCTTCTAGGGACTTAGTAAATTCCATTCTTCTGGAGCTCTGCTAATACAGTGGGCATGGGCCACTTGCATGGTGATGCATAGCATCACTGCAGGTGCCGTGTCTCT-CATACTCCTCAGATACCCCTGGGCCCTGAAATGCTAGT-----GGTCAACTTTGAAAAGACCCCTGGATTGG-----------------AGCTGGTGGAACTCT-GAAAGGCCAGGTGTACA i dasNov3.JH576208 I 274 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e saiBol1.JH378218 1223775 346 - 7082604 I e cebCap1.NW_016107827v1 1311729 24 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e calJac3.chr14 1377923 66 - 108792865 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M a score=69878.000000 s hg38.chr2_KI270774v1_alt 115493 15 + 223625 ---TGTGGGAGAC--CAGGA s panTro5.chr2A 1404532 15 + 111504155 ---TGTGGGAGAC--CAGGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1353377 15 + 114371477 ---TGTGGGAGAC--CAGGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1377629 15 + 1464242 ---TGTGGGAGAC--CAGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1101433 15 + 81552678 ---TGTGGGAGAC--CAGGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1432517 15 + 108979918 ---TGTGGGAGAC--CAGGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1404896 15 - 111193037 ---TGTGGGAGAC--CAGGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433276 15 + 3644372 ---TGTGGGAGGC--CAGGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1386576 15 - 10304083 ---TGTGGGAGAC--CAGGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471254 15 - 107702431 ---TGTGGGAGAC--CAGGA i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1383524 15 - 13651311 ---TGTGGGAGAC--CAGGA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1224121 15 - 7082604 ---TGAGGAAGGCTGCAG-- i saiBol1.JH378218 I 346 C 0 s dasNov3.JH576208 1705341 15 + 4416731 AACAGGCAAACAC--CA--- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e cebCap1.NW_016107827v1 1311729 24 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e calJac3.chr14 1377923 66 - 108792865 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M a score=60080.000000 s hg38.chr2_KI270774v1_alt 115508 9 + 223625 GTAAGGGGA s panTro5.chr2A 1404547 9 + 111504155 GTAAGGGGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1353392 9 + 114371477 GTAAGGGGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1377644 9 + 1464242 GTAAGGGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1101448 9 + 81552678 GTAAGGGGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1432532 9 + 108979918 GTGAGGGGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1404911 9 - 111193037 GTGAGGGGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433291 7 + 3644372 GTGAGGG-- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1386591 9 - 10304083 gtgagggga i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471269 9 - 107702431 GTGAGGGGA i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1383539 9 - 13651311 GTGAGGGAA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1377989 9 - 108792865 GTGAGGGGA i calJac3.chr14 I 66 C 0 s saiBol1.JH378218 1224136 9 - 7082604 GTGAGGGGA i saiBol1.JH378218 C 0 C 0 s dasNov3.JH576208 1705356 9 + 4416731 GCAAGGGAA i dasNov3.JH576208 C 0 I 98 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e cebCap1.NW_016107827v1 1311729 24 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M a score=85583.000000 s hg38.chr2_KI270774v1_alt 115517 16 + 223625 GGCCTGCAGGTGAGGG s panTro5.chr2A 1404556 16 + 111504155 GGCCTGCAGGTGAGGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1353401 16 + 114371477 GGCCTACAGGTGAGGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1377653 16 + 1464242 GGCCTGCAGGTGAGGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1101457 16 + 81552678 GGCCTGCAGGTGAGGG i nomLeu3.chr19 C 0 I 137 s rheMac8.chr13 1432541 16 + 108979918 GGCCTGCAGGTGAGGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1404920 16 - 111193037 GGCCTGCAGGTGAGGA i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1386600 16 - 10304083 ggcctgcgggtgagga i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471278 16 - 107702431 GGCCTGGGTGTGAGGG i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1383548 16 - 13651311 GGCCTGCAGGTGGGGT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1377998 16 - 108792865 GGCCTGAAGGTGAGGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1224145 16 - 7082604 GGCCTGCAGGTGAGGG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e cebCap1.NW_016107827v1 1311729 24 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1705365 98 + 4416731 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M e macNem1.NW_012011978v1 1433298 0 + 3644372 C a score=145373.000000 s hg38.chr2_KI270774v1_alt 115533 53 + 223625 GAGGCCC---------------------------------------------------------------------------CAGGT------------------------------GTGGA------------------GAGGC--CTGCAG-GTGAGGGGAGGCCTGCAGGTGAGGA s panTro5.chr2A 1404572 53 + 111504155 GAGGCCC---------------------------------------------------------------------------CACGT------------------------------GTGGA------------------GAGGC--CTGCAG-GTGAGGGGAGGCCTGCAGGTGAGGA i panTro5.chr2A C 0 I 247 s panPan2.chr2A 1353417 53 + 114371477 GAGGCCC---------------------------------------------------------------------------CACGT------------------------------GTGGA------------------GAGGC--CTGCAG-GTGAGGAGAGGCCTGCAGGTGAGGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1377669 128 + 1464242 GAGGCCTGCAGGTGAGGAGAGAGGCCTGCAGGTGAGGGGAGGCCTGCAGGTGAGGAGAGACCTGCAGGTGAGGGGAGGCCTGCAGGT------------------------------GAGGA------------------GAGGC--CTGCAG-GTGAGGGGAGGCCTGCAGGTGAGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1101610 52 + 81552678 GAGGCCC---------------------------------------------------------------------------CAGGT------------------------------GAGGA------------------GAGGC--CTGCAG-GTGAGGGGAGGCCC-CAGGTGAGGA i nomLeu3.chr19 I 137 C 0 s rheMac8.chr13 1432557 36 + 108979918 --------------------------------------------------------------------------------------------------------------------------------------------GAGGC--CTGCGG-GTGAGGAGAGGCCTGCAGGTGAGGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1404936 72 - 111193037 GAGGCCT--------------------------------------------------------------------------GCGGGT------------------------------GAGGAGAGGCCTGCGGGTGGGGTGAGGC--CTGCAG-GTGAGGAGAGGCCTGCGGGTGAGGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433298 36 + 3644372 --------------------------------------------------------------------------------------------------------------------------------------------GAGGC--CTGCAG-GTGAGGAGAGGCCTGCGGGTGAGGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1386616 36 - 10304083 --------------------------------------------------------------------------------------------------------------------------------------------gaggc--ctgcag-gtggggagaggcctgcgggtgagga i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471294 55 - 107702431 GAGGCCC--------------------------------------------------------------------------GCGGGT------------------------------GAGGG------------------GAGGC--CTGCAGTGTGAGGAGAGGCCTGCGGGTGAGGA i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1383564 36 - 13651311 --------------------------------------------------------------------------------------------------------------------------------------------GAGGC--CTGCAG-GTGAGGGGAGGCCTGTGGGTGAGGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1378014 83 - 108792865 -----------------------------------------------------------------------------GTCTGCAGGTGAGAGGTCTGCAGGTGAGGGGGGCCTTCAGGTGAG------------------GGGGGTCCTGCAG-GTGAGGGGAGGCCTTCAGGTGAGGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1224161 51 - 7082604 -----------------------------------------------------------------------------ATCTGCAGGT------------------------------GTTGG------------------GGGGG--CTGCAG-GTGACGGGATGTCTGCAGGTGAGGG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e cebCap1.NW_016107827v1 1311729 24 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1705365 98 + 4416731 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M a score=111285.000000 s hg38.chr2_KI270774v1_alt 115586 28 + 223625 GAGGCCTGCAGGTGGGGTGA------------------GGCCTGCA s panPan2.chr2A 1353470 28 + 114371477 GAGGCCTGCAGGTGAGGGGA------------------GGCCTGCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1377797 28 + 1464242 GAGGCCTGCAGGTGAGGGGA------------------GGCCTGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1101662 27 + 81552678 GAGGCCTGCAGGTGAGGAGA------------------GGCCC-CA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1432593 28 + 108979918 GAGGCCTGCGGGTGAGGTGA------------------GGCCTGCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1405008 28 - 111193037 AAGACCTGCAGGTGGGGTGA------------------GGCCTGCG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433334 28 + 3644372 GAGGCCTGCAGGTGGGGTGA------------------GGCCTGCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1386652 28 - 10304083 gaggcctgcgggtggggtga------------------ggcctgcg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471349 28 - 107702431 GAGGCCGGCAGGTGAGGGGA------------------GGCCTGGG i chlSab2.chr14 C 0 T 11100 s colAng1.NW_012118821v1 1383600 28 - 13651311 GAGACCTGCAGGTGGAGTGA------------------GGCCTGGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1378097 46 - 108792865 GAGGCCTGCAGGTGAGGGGAAGCCTTCAGGTGAGGGGGGGCCTGCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1224212 22 - 7082604 GG---CTGCAGGTGAGGGGG---------------------CTGTa i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e cebCap1.NW_016107827v1 1311729 24 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1705365 98 + 4416731 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M e panTro5.chr2A 1404625 247 + 111504155 I a score=154936.000000 s hg38.chr2_KI270774v1_alt 115614 36 + 223625 GGTGAGGAGAGGCCTGCAGGTGGGGTGAG-----------------GCCTGCA s panPan2.chr2A 1353498 36 + 114371477 GGTGAGGAGAGGCCTGCAGGTGGGGTGAG-----------------GCCTGCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1377825 36 + 1464242 GGTGAGGAGAGGCCTGCAGGTGAGGGGAG-----------------GCCTGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1101689 35 + 81552678 GGTGAGGGGAGGCCTGCAGGTGAGGAGAG-----------------GCCC-CA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1432621 36 + 108979918 GGTGAGGAGAGGCCTGCGGGTGAGGAGAG-----------------GCCTGCG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1405036 36 - 111193037 GGTGAGGAGAGGCCTGCGGGTGAGGAGAG-----------------GCCTGCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433362 36 + 3644372 GGTGAGGAGAGGCCTGCGGGTGAGGAAAG-----------------ACCTGCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1386680 36 - 10304083 ggtggggtgaggcctgcgggtggggtgag-----------------gcctgca i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1460277 36 - 107702431 GGTGAGGAGAGGCCTGCGGGTGAGGGGAG-----------------GCCTGGG i chlSab2.chr14 T 11100 C 0 s colAng1.NW_012118821v1 1383628 36 - 13651311 GGTGAGGGGAGGCCTGCATGTGAGGGGAG-----------------GCCTGCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1378143 52 - 108792865 GGTGAGGGGGG-CCTTCAGGTGAGGGGATGCCTGCATGGGAGGGGGGCCTGCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1224234 34 - 7082604 gctgaggggag--ctacaggtgaggggat-----------------gtctgca i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e cebCap1.NW_016107827v1 1311729 24 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1705365 98 + 4416731 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M e panTro5.chr2A 1404625 247 + 111504155 I a score=54608.000000 s hg38.chr2_KI270774v1_alt 115650 11 + 223625 GGTG-----------------AGGGGAG s panPan2.chr2A 1353534 28 + 114371477 GGTGAGGTGAGGCCCCAGGTAAGGAGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1377861 11 + 1464242 GGTG-----------------AGGGGAG i gorGor5.CYUI01015607v1 C 0 I 140 s nomLeu3.chr19 1101724 11 + 81552678 GGTG-----------------AGGGGAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1432657 11 + 108979918 GGTG-----------------AGGAGAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1405072 11 - 111193037 GGTG-----------------GGGTGAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433398 11 + 3644372 GGTG-----------------GGGTGAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1386716 11 - 10304083 ggtg-----------------gggtgag i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1460313 11 - 107702431 GGTG-----------------AGGGGAG i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1383664 11 - 13651311 GGTG-----------------AGGGGAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1378195 11 - 108792865 GGTG-----------------AAAGGAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1224268 11 - 7082604 ggtg-----------------agaggag i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1311753 11 + 1864846 gGTG-----------------AGGGGGG i cebCap1.NW_016107827v1 I 24 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1705365 98 + 4416731 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M e panTro5.chr2A 1404625 247 + 111504155 I a score=94203.000000 s hg38.chr2_KI270774v1_alt 115661 15 + 223625 GCCTGCAGGTGAGGG s panPan2.chr2A 1353562 15 + 114371477 GCCTGCAGGTGAGGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1378012 15 + 1464242 GCCTGCAGGTGAGGA i gorGor5.CYUI01015607v1 I 140 C 0 s nomLeu3.chr19 1101735 15 + 81552678 GCCTGCAGGTGAGGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1432668 15 + 108979918 GCCTGCGGGTGAGGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1405083 15 - 111193037 GCCTGCGGGTGAGGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433409 15 + 3644372 GCCTGAGGGTGAGGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1386727 15 - 10304083 gcctgcgggtgaggg i cerAty1.NW_012000820v1 C 0 I 18 s chlSab2.chr14 1460324 15 - 107702431 GCCTGCGGGTGAGGG i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1383675 15 - 13651311 GCCTGCAGGTGAGGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1378206 15 - 108792865 GCCTTCAGGTGAGGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1224279 15 - 7082604 gtctgcaggtgaggg i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1311764 15 + 1864846 GCCTTCAAGTGAGGG i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1705365 98 + 4416731 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M e panTro5.chr2A 1404625 247 + 111504155 I a score=25868.000000 s hg38.chr2_KI270774v1_alt 115676 7 + 223625 GAGGCCT s panPan2.chr2A 1353577 7 + 114371477 GAGGCCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1378027 7 + 1464242 GAGGCCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1101750 7 + 81552678 GAGGCCC i nomLeu3.chr19 C 0 I 34 s rheMac8.chr13 1432683 7 + 108979918 AAGACCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1405098 7 - 111193037 GAGGCCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433424 7 + 3644372 GAGGCCT i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1460339 7 - 107702431 GAGGCCT i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1383690 7 - 13651311 GAGGCCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1378221 6 - 108792865 GGG-CCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1224294 5 - 7082604 gag--ct i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1311779 7 + 1864846 GAGGTCT i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1705365 98 + 4416731 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M e cerAty1.NW_012000820v1 1386742 18 - 10304083 I e panTro5.chr2A 1404625 247 + 111504155 I a score=5500.000000 s hg38.chr2_KI270774v1_alt 115683 1 + 223625 G s panPan2.chr2A 1353584 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1378034 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1432690 1 + 108979918 G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1405105 1 - 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433431 1 + 3644372 G i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1460346 1 - 107702431 G i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1383697 1 - 13651311 G i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1378227 1 - 108792865 G i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1224299 1 - 7082604 g i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1311786 1 + 1864846 G i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1705365 98 + 4416731 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M e cerAty1.NW_012000820v1 1386742 18 - 10304083 I e nomLeu3.chr19 1101757 34 + 81552678 I e panTro5.chr2A 1404625 247 + 111504155 I a score=38797.000000 s hg38.chr2_KI270774v1_alt 115684 7 + 223625 CAGGTGA s panPan2.chr2A 1353585 7 + 114371477 CAGGTGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1378035 7 + 1464242 CAGGTGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1101791 7 + 81552678 CAGGTGA i nomLeu3.chr19 I 34 C 0 s rheMac8.chr13 1432691 7 + 108979918 CAGGTGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1405106 7 - 111193037 CGGGTGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433432 7 + 3644372 CGGGTGA i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1460347 7 - 107702431 CGGGTGA i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1383698 7 - 13651311 CAGGTGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1378228 7 - 108792865 CAGGTGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1224300 7 - 7082604 aaggtga i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1311787 7 + 1864846 CAGGTGA i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1705365 98 + 4416731 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M e cerAty1.NW_012000820v1 1386742 18 - 10304083 I e panTro5.chr2A 1404625 247 + 111504155 I a score=42893.000000 s hg38.chr2_KI270774v1_alt 115691 9 + 223625 GGAGAGGCC s panTro5.chr2A 1404872 9 + 111504155 GGAGAGGCC i panTro5.chr2A I 247 C 0 s panPan2.chr2A 1353592 9 + 114371477 GGAGAGGCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1378042 9 + 1464242 GGGGAGGCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1101798 9 + 81552678 GGAGAGGCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1432698 9 + 108979918 GGAGAGGCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1405113 9 - 111193037 GGAGAGGCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433439 9 + 3644372 GGGGAGGCC i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1460354 9 - 107702431 GGGGAGGCC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1383705 9 - 13651311 GGAGAGGCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1378235 9 - 108792865 GGGGAGGCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1224307 8 - 7082604 gggg-ggtc i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1311794 6 + 1864846 GGGG-G--C i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1705365 98 + 4416731 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M e cerAty1.NW_012000820v1 1386742 18 - 10304083 I a score=48444.000000 s hg38.chr2_KI270774v1_alt 115700 9 + 223625 TGCAGGTGA s panTro5.chr2A 1404881 9 + 111504155 TGCAGGTGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1353601 9 + 114371477 TGTAGGTGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1378051 9 + 1464242 TGCAGGTGA i gorGor5.CYUI01015607v1 C 0 T 212 s nomLeu3.chr19 1101807 9 + 81552678 TGCAGGTGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1432707 9 + 108979918 TGCAGGTGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1405122 9 - 111193037 TGCGGGTGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433448 9 + 3644372 TGCGGGTGA i macNem1.NW_012011978v1 C 0 C 0 s colAng1.NW_012118821v1 1383714 9 - 13651311 TGCATGTGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1378244 9 - 108792865 TTCAGGTGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1224315 9 - 7082604 tgcaggtga i saiBol1.JH378218 C 0 I 1 s cebCap1.NW_016107827v1 1311800 9 + 1864846 TGCAGGTGA i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1705365 98 + 4416731 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M e chlSab2.chr14 1460363 0 - 107702431 C e cerAty1.NW_012000820v1 1386742 18 - 10304083 I a score=14133.000000 s hg38.chr2_KI270774v1_alt 115709 3 + 223625 GGG s panTro5.chr2A 1404890 3 + 111504155 GGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1353610 3 + 114371477 GGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1377848 3 + 1464242 GGG i gorGor5.CYUI01015607v1 T 212 I 265 s nomLeu3.chr19 1101816 3 + 81552678 GGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1432716 3 + 108979918 GGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1405131 3 - 111193037 GGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433457 3 + 3644372 GGG i macNem1.NW_012011978v1 C 0 C 0 s colAng1.NW_012118821v1 1383723 3 - 13651311 GGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1378253 3 - 108792865 GGG i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1311809 3 + 1864846 GGG i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e saiBol1.JH378218 1224324 1 - 7082604 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1705365 98 + 4416731 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M e chlSab2.chr14 1460363 0 - 107702431 C e cerAty1.NW_012000820v1 1386742 18 - 10304083 I a score=4190.000000 s hg38.chr2_KI270774v1_alt 115712 1 + 223625 G s panTro5.chr2A 1404893 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1353613 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1378116 1 + 1464242 G i gorGor5.CYUI01015607v1 I 265 C 0 s nomLeu3.chr19 1101819 1 + 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1432719 1 + 108979918 A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1405134 1 - 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433460 1 + 3644372 G i macNem1.NW_012011978v1 C 0 C 0 s colAng1.NW_012118821v1 1383726 1 - 13651311 G i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1378256 1 - 108792865 G i calJac3.chr14 C 0 I 17 s cebCap1.NW_016107827v1 1311812 1 + 1864846 G i cebCap1.NW_016107827v1 C 0 I 780 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e saiBol1.JH378218 1224324 1 - 7082604 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1705365 98 + 4416731 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M e chlSab2.chr14 1460363 0 - 107702431 C e cerAty1.NW_012000820v1 1386742 18 - 10304083 I a score=-5129.000000 s hg38.chr2_KI270774v1_alt 115713 1 + 223625 -A s panTro5.chr2A 1404894 1 + 111504155 -A i panTro5.chr2A C 0 I 35 s panPan2.chr2A 1353614 1 + 114371477 -A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1378117 1 + 1464242 -A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1101820 1 + 81552678 -A i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1432720 1 + 108979918 -A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1405135 1 - 111193037 -A i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433461 1 + 3644372 -A i macNem1.NW_012011978v1 C 0 C 0 s colAng1.NW_012118821v1 1383727 1 - 13651311 -A i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1378274 1 - 108792865 G- i calJac3.chr14 I 17 C 0 s saiBol1.JH378218 1224325 1 - 7082604 c- i saiBol1.JH378218 I 1 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e cebCap1.NW_016107827v1 1311813 780 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1705365 98 + 4416731 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M e chlSab2.chr14 1460363 0 - 107702431 C e cerAty1.NW_012000820v1 1386742 18 - 10304083 I a score=192274.000000 s hg38.chr2_KI270774v1_alt 115714 66 + 223625 GGCCTGCAGGTGGGGTGAGGCCTGCAGGTGAGGAGAGGCCTGCAGGTGAGGAGAGGCCTGCAGGTG s panPan2.chr2A 1353615 47 + 114371477 GGCCTGCAGGTGGGGGGAGGCC-------------------GCAGATGAGGAGAGGCCTGCAGGTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1378118 66 + 1464242 GGCCTGCAGGTGGGGTGAGGCCTGCAGGTGAGGGGAGGCCTGCAGGTGAGGAGAGGCCTGCAGGTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1101821 64 + 81552678 GGCCC-CAGGTGAGGAGAGGCCTGCAGGTGAGGAGAGGCC-CCAGGTGAGGGGAGGCCTGCAGGTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1432721 66 + 108979918 GACCTGCGGGTGGGGTGAGGCCTGCAGGTGAGGAGAGGCCTGCGGGTGAGGAAAGACCTGCAGGTG i rheMac8.chr13 C 0 I 416 s macFas5.chr13 1405136 66 - 111193037 GGCCTGCAGGTGGGGTGAGGCCTGCAGGTGAGGAGAGGCCTGCGGGTGAGGAGAGGCCTGCGGGTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433462 64 + 3644372 GGCCTGCAGGTGAGGTGAGGCCTGGGGATGAGGGGAGGCCTGCGGGTGAGGGGAGGCCTGCGGG-- i macNem1.NW_012011978v1 C 0 C 0 s colAng1.NW_012118821v1 1383728 66 - 13651311 GGCCTGCAGGTGAGGGGAGGCCTGCAGGTGAGGGGAAGCCTGCAGGTGAGGGGAGGCCTGCAGGTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1378275 66 - 108792865 GGCCTGCaggtgaggggaggccttcaggtgaggggaggccttcaggtgagggggagcctgcaggtg i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1224326 64 - 7082604 ggtcttcaggtgaggggaggtctgcaaatgagggggg--ctgcatctgaggggagatctgcaggtg i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e cebCap1.NW_016107827v1 1311813 780 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1705365 98 + 4416731 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M e chlSab2.chr14 1460363 0 - 107702431 C e cerAty1.NW_012000820v1 1386742 18 - 10304083 I e panTro5.chr2A 1404895 35 + 111504155 I a score=13861.000000 s hg38.chr2_KI270774v1_alt 115780 10 + 223625 AGGGGAGGCC- s panPan2.chr2A 1353662 10 + 114371477 AGGGGAGGCC- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1378184 10 + 1464242 AGGAGAGGCC- i gorGor5.CYUI01015607v1 C 0 I 122 s nomLeu3.chr19 1101885 10 + 81552678 AGGAGAGGCC- i nomLeu3.chr19 C 0 I 34 s macFas5.chr13 1405202 10 - 111193037 AGGGGAGGCC- i macFas5.chr13 C 0 C 0 s colAng1.NW_012118821v1 1383794 10 - 13651311 AGGGGAGGCC- i colAng1.NW_012118821v1 C 0 I 20 s calJac3.chr14 1378341 11 - 108792865 agggggggcct i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1224390 8 - 7082604 aggggg---ct i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e cebCap1.NW_016107827v1 1311813 780 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1705365 98 + 4416731 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M e chlSab2.chr14 1460363 0 - 107702431 C e cerAty1.NW_012000820v1 1386742 18 - 10304083 I e macNem1.NW_012011978v1 1433526 0 + 3644372 C e rheMac8.chr13 1432787 416 + 108979918 I e panTro5.chr2A 1404895 35 + 111504155 I a score=-3373.000000 s hg38.chr2_KI270774v1_alt 115790 1 + 223625 -C s panPan2.chr2A 1353672 1 + 114371477 -C i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1101929 1 + 81552678 -C i nomLeu3.chr19 I 34 C 0 s macFas5.chr13 1405212 1 - 111193037 -T i macFas5.chr13 C 0 I 199 s calJac3.chr14 1378352 1 - 108792865 g- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1224398 1 - 7082604 g- i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e cebCap1.NW_016107827v1 1311813 780 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1705365 98 + 4416731 I e colAng1.NW_012118821v1 1383804 20 - 13651311 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M e chlSab2.chr14 1460363 0 - 107702431 C e cerAty1.NW_012000820v1 1386742 18 - 10304083 I e macNem1.NW_012011978v1 1433526 0 + 3644372 C e rheMac8.chr13 1432787 416 + 108979918 I e gorGor5.CYUI01015607v1 1378194 122 + 1464242 I e panTro5.chr2A 1404895 35 + 111504155 I a score=18106.000000 s hg38.chr2_KI270774v1_alt 115791 10 + 223625 CAGATGAGGA s panPan2.chr2A 1353673 10 + 114371477 CAGATGAGGA i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1101930 10 + 81552678 CAGGTGAGGA i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1405412 10 - 111193037 CGGGTGGGGA i macFas5.chr13 I 199 C 0 s macNem1.NW_012011978v1 1433526 6 + 3644372 ----TGGGGA i macNem1.NW_012011978v1 C 0 C 0 s colAng1.NW_012118821v1 1383824 10 - 13651311 CAGGTGAGGG i colAng1.NW_012118821v1 I 20 C 0 s calJac3.chr14 1378353 10 - 108792865 caggtgaggg i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1224399 10 - 7082604 caggtgaggg i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e cebCap1.NW_016107827v1 1311813 780 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1705365 98 + 4416731 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M e chlSab2.chr14 1460363 0 - 107702431 C e cerAty1.NW_012000820v1 1386742 18 - 10304083 I e rheMac8.chr13 1432787 416 + 108979918 I e gorGor5.CYUI01015607v1 1378194 122 + 1464242 I e panTro5.chr2A 1404895 35 + 111504155 I a score=11033.000000 s hg38.chr2_KI270774v1_alt 115801 6 + 223625 GAGGCA s panPan2.chr2A 1353683 6 + 114371477 GAGGCA i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1101940 6 + 81552678 GAGGCC i nomLeu3.chr19 C 0 I 18 s macFas5.chr13 1405422 6 - 111193037 GAGGCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433532 6 + 3644372 GAGGCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1386760 6 - 10304083 gaggCA i cerAty1.NW_012000820v1 I 18 C 0 s colAng1.NW_012118821v1 1383834 6 - 13651311 GAGGCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1378363 6 - 108792865 gaggcc i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1224409 4 - 7082604 ggg--c i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e cebCap1.NW_016107827v1 1311813 780 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1705365 98 + 4416731 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M e chlSab2.chr14 1460363 0 - 107702431 C e rheMac8.chr13 1432787 416 + 108979918 I e gorGor5.CYUI01015607v1 1378194 122 + 1464242 I e panTro5.chr2A 1404895 35 + 111504155 I a score=41257.000000 s hg38.chr2_KI270774v1_alt 115807 11 + 223625 TTCAGATGAGG s panTro5.chr2A 1404930 11 + 111504155 TTCAGATGAGG i panTro5.chr2A I 35 C 0 s panPan2.chr2A 1353689 11 + 114371477 TTCAGATGAGG i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1101964 11 + 81552678 TTCAGATGAGG i nomLeu3.chr19 I 18 C 0 s macFas5.chr13 1405428 11 - 111193037 TTCAGATGAGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433538 11 + 3644372 TTCAGATGAGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1386766 11 - 10304083 TTCACATGAGG i cerAty1.NW_012000820v1 C 0 C 0 s colAng1.NW_012118821v1 1383840 11 - 13651311 TTCAGATGAGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1378369 11 - 108792865 ttcaggtgagg i calJac3.chr14 C 0 I 431 s saiBol1.JH378218 1224413 11 - 7082604 tgcaggtgagg i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e cebCap1.NW_016107827v1 1311813 780 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1705365 98 + 4416731 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M e chlSab2.chr14 1460363 0 - 107702431 C e rheMac8.chr13 1432787 416 + 108979918 I e gorGor5.CYUI01015607v1 1378194 122 + 1464242 I a score=-2455.000000 s hg38.chr2_KI270774v1_alt 115818 1 + 223625 -C s panTro5.chr2A 1404941 1 + 111504155 -C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1353700 1 + 114371477 -C i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1101975 1 + 81552678 -G i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1405439 1 - 111193037 -C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433549 1 + 3644372 -C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1386777 1 - 10304083 -C i cerAty1.NW_012000820v1 C 0 C 0 s colAng1.NW_012118821v1 1383851 1 - 13651311 -C i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1224424 1 - 7082604 g- i saiBol1.JH378218 C 0 I 1 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e cebCap1.NW_016107827v1 1311813 780 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1705365 98 + 4416731 I e calJac3.chr14 1378380 431 - 108792865 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M e chlSab2.chr14 1460363 0 - 107702431 C e rheMac8.chr13 1432787 416 + 108979918 I e gorGor5.CYUI01015607v1 1378194 122 + 1464242 I a score=15490.000000 s hg38.chr2_KI270774v1_alt 115819 4 + 223625 AGGC s panTro5.chr2A 1404942 4 + 111504155 AGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1353701 4 + 114371477 AGGC i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1101976 4 + 81552678 AGGC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1405440 4 - 111193037 AGGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433550 4 + 3644372 AGGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1386778 4 - 10304083 AGGC i cerAty1.NW_012000820v1 C 0 C 0 s colAng1.NW_012118821v1 1383852 4 - 13651311 AGGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1378811 4 - 108792865 AGGT i calJac3.chr14 I 431 C 0 s saiBol1.JH378218 1224426 4 - 7082604 aggt i saiBol1.JH378218 I 1 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e cebCap1.NW_016107827v1 1311813 780 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1705365 98 + 4416731 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M e chlSab2.chr14 1460363 0 - 107702431 C e rheMac8.chr13 1432787 416 + 108979918 I e gorGor5.CYUI01015607v1 1378194 122 + 1464242 I a score=34122.000000 s hg38.chr2_KI270774v1_alt 115823 8 + 223625 TTCACATA s panTro5.chr2A 1404946 8 + 111504155 TTCACATA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1353705 8 + 114371477 TTCACATA i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1101980 8 + 81552678 TTCACATA i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1405444 8 - 111193037 TTCACATG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433554 8 + 3644372 TTCACATG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1386782 8 - 10304083 TTCACATG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1460363 8 - 107702431 TTCACATG i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1383856 8 - 13651311 TTCACATG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1378815 8 - 108792865 TTCACAGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1224430 8 - 7082604 TTCACAGG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e cebCap1.NW_016107827v1 1311813 780 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1705365 98 + 4416731 I e manLeu1.NW_012103754v1 943552 4534 - 2200435 M e rheMac8.chr13 1432787 416 + 108979918 I e gorGor5.CYUI01015607v1 1378194 122 + 1464242 I a score=143898.000000 s hg38.chr2_KI270774v1_alt 115831 32 + 223625 TTTCTTCTTCTATGAGGGTGTGTTTAGCTCTC s panTro5.chr2A 1404954 32 + 111504155 TTTCTTCTTCTATGAGGGTGTGTTTAGCTCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1353713 32 + 114371477 TTTCTTCTTCTATGAGGGTGTGTTTAGCTCTC i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1101988 32 + 81552678 TTTCTTCTTCTGTGAGGGTGTGTTTAGCTCTC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1405452 32 - 111193037 TTTCTTATTCTATGAGGGCGTGTTTAGCTCTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433562 32 + 3644372 TTTCTTATTCTGTGAGGGCGTGTTTAGCTCTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1386790 32 - 10304083 TTTCTTATTCTATGAGGGTGTGTTTAGCTCTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1460371 32 - 107702431 TTTCTTCCTCTGTGAGAGTGTGTTTAGCTCTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 948093 32 - 2200435 TTTCTTCTTCTATGAGGGTGTGTTTAGTTCTC i manLeu1.NW_012103754v1 M 4534 C 0 s colAng1.NW_012118821v1 1383864 32 - 13651311 TTTCTTCCTCTGTGACGGTGTGTTTAGCTCTC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1378823 30 - 108792865 TTTCTT-TTCTATGAGGGTGTATGTAGCTCT- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1224438 30 - 7082604 TGTCCT-CTCTATGAAGGTGTATGCAGATCT- i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e cebCap1.NW_016107827v1 1311813 780 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1705365 98 + 4416731 I e rheMac8.chr13 1432787 416 + 108979918 I e gorGor5.CYUI01015607v1 1378194 122 + 1464242 I a score=172156.000000 s hg38.chr2_KI270774v1_alt 115863 32 + 223625 ACTGTGAACAGCTTTGCTGCCCCGTTCTAGGG s panTro5.chr2A 1404986 32 + 111504155 ACTGTGAACAGCTTTGCTGCCCCGTTCTAGGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1353745 32 + 114371477 ACTGTGAACAGCTTTGCTGCCCCGTTCTAGGG i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1102020 32 + 81552678 ACTGTGAACAGCTTTGCTGCCCCATTCTGGCG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1405484 32 - 111193037 ACTGTGAACAGCTTTGCTGCCCCATTGTGGGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433594 32 + 3644372 ACTGTGAACAGCTTTGCTGCCCCATTGTGGGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1386822 31 - 10304083 ACTGTGAACAGCTTTGCTG-CCTGTTGTGGGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1460403 31 - 107702431 ACTGTGAACAGCTTTGCTG-CCCATTGTGGGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 948125 31 - 2200435 ACTGTGAACAGCTTTGCTG-CCTGTTGTGGGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1383896 32 - 13651311 ACTGTGAACAGCTTTGCTGCCCCGTTGTGAGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1378853 32 - 108792865 ACTGTGAACAGCTTTGCTGCCCCGCTCCGGGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1224468 32 - 7082604 ACTGTGAACAGCTCTGCTGCCCCGCCCCGGGG i saiBol1.JH378218 C 0 C 0 s dasNov3.JH576208 1705463 32 + 4416731 ACCATAAACAGCTTTGTTGCCATATTTTGTTC i dasNov3.JH576208 I 98 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e cebCap1.NW_016107827v1 1311813 780 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e rheMac8.chr13 1432787 416 + 108979918 I e gorGor5.CYUI01015607v1 1378194 122 + 1464242 I a score=75815.000000 s hg38.chr2_KI270774v1_alt 115895 18 + 223625 CTGCATTGAGCCAATGCT s panTro5.chr2A 1405018 18 + 111504155 CTGCATTGAGCCAATGCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1353777 18 + 114371477 CTGCATTGAGCCAATGCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1378316 18 + 1464242 CTGCATTGAGCCGATGCT i gorGor5.CYUI01015607v1 I 122 C 0 s nomLeu3.chr19 1102052 18 + 81552678 CTGCATTGAGCCGACGCT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1405516 18 - 111193037 CTGCACTGAGCAGATGCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433626 18 + 3644372 CTGCACTGAGCAGATGCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1386853 18 - 10304083 CTGCACTGAGGAGATGCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1460434 18 - 107702431 CTGCACTGAGCGGATGCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 948156 18 - 2200435 CTGCACTGAGGAGATGCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1383928 18 - 13651311 CTGCACTGAGGAGATGCT i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1705495 18 + 4416731 CTGTGGTTCATTGATTCT i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 104205 1214 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I e saiBol1.JH378218 1224500 0 - 7082604 C e cebCap1.NW_016107827v1 1311813 780 + 1864846 I e otoGar3.GL873658 934202 1873 + 5252280 I e calJac3.chr14 1378885 0 - 108792865 C e rheMac8.chr13 1432787 416 + 108979918 I a score=894652.000000 s hg38.chr2_KI270774v1_alt 115913 111 + 223625 CTGCACTGGAGTGGGAAGGGAAGAAGT--TGGAGCTGGGACACATGCAGCTTCTGCAGGCTTTGGCTCTGAGATCAGGGCAGGGCTGTGCGCTTCCCAGTCTCCTGTTTCATT----- s panTro5.chr2A 1405036 111 + 111504155 CTGCACTGGAGTGGGAAGGGAAGAAGT--TGGAGCTGGGACACATGCAGCTTCTGCAGGCTTTGGCTCTGAGATCAGGGCAGGGCCGTGCACTCCCCAGTATCCTGTCTCATT----- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1353795 111 + 114371477 CTGCACTGGAGTGGGAAGGGAAGAAGT--TGGAGCTGGGACACATGCAGCTTCTGCAGGCTTTGGCTCTGAGATCAGGGCAGGGCCATGCACTCCCCAGTATCCTGTCTCATT----- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1378334 111 + 1464242 CTGCACTGGAGTGGGAAGGGAAGAAGT--TAGAGCTGGGACACATGCAGCTTCTGCAGGCTTCGGCTCTGAGATCAGGGCAGGGCCATGCACTCCCCAGTATCCTGTCTCATT----- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1102070 111 + 81552678 CTGCACTGGAGTGGGAAGGGAAGAAGT--TGGAGCTGGGACACAGGCAGCCTCGGCCGGCATTGGCTCTGAGATCAGGGCAGGGCCGTGCACTCCCCAGTATCCTGTCTCAGT----- i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1405534 111 - 111193037 CTGCACTGGAGTGGGAAGCGAAGAAGT--TGGAGCTGGGACACAGGCAGCCTCGGCCGGCATTGGCTCTGAGATCAAGGCAGGGCCGTGCACTGCCCAGTCTCCTGTTTCATT----- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433644 111 + 3644372 CTGCACTGGAGTGGGAAGCGAAGAAGT--TGGAGCTGGGACACAGGCAGCCTCGGCCGGCATTGGCTCTGAGATCAAGGCAGGGCCGTGCACTGCCCAGTCTCCTGTTTCATT----- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1386871 111 - 10304083 CTGCATTGGAGTGGGAAGCGAAGAAGT--TGGAGCTGGGACACAGGCAGCCTCAGCAGGCATTGGCTCTGAGATCAAGGCAGGGCCGTGCACTGCCCAGTCTCCTGTTTCATT----- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1460452 111 - 107702431 CTGCACTGGAGTGGGAAGCGAAGAAGT--TGGAGCTGGGACACAGGCAGCCTCAGCTGGCATTGGCTCTGAGATCAGGGCAGGGCCGTGCACTCCCCAGTCTCCTGTTTCATT----- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 948174 111 - 2200435 CTGCACTGGAGTGGGAAGCGAAGAAGT--TGGAGCTGGGACACAGGCAGCCTTGGCCGGCATTGGCTCTGAGATCAGGGCAGGGCCGTGCACTGCCCAGTCTCCTGTTTCATT----- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1383946 111 - 13651311 CTGCACTGGAGTGGGAAGCAAAGAAGT--TGGAGCTGGGACACAGGCAGCCTCGGCAGGCATTGGCTCTGAGATCAGGGCAGGGCCGTGCACTCCCCAGTCTCCTGTTTCATT----- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1378885 111 - 108792865 CTGCACTGGAGTGGGAAGGGAAGAAGT--TGCAGCTGGGACACAGGTGCCCTCACTAGGCCTTGGCTCTGAGATCAGGTTGAGGCCATGCACTCCCCAGGCTCCTGTTTCCTC----- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1224500 111 - 7082604 CTGCACTGGAGTGGAAAGGGAAGAATT--TGCAGCGGGGACACAGGTGCCCTCTCCGGGCCTTGGCTCTGAGATCAGGTTGAGGCCGTGTACTCCCCAGTCTCCTGTTTCGTC----- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1312593 109 + 1864846 CTGCACTGGAGTGGGAAGGGAAGAAGT--TGCAGCCGGGACACAGGTGCCCTCACCAGGCCTTGGCTCTGAGATCAGTTTTAGGCCGTGTACTCCCCAGGCTC--GTTTCATC----- i cebCap1.NW_016107827v1 I 780 C 0 s aotNan1.NW_018513311v1 105419 111 + 287728 CTGCGCTGGAGTGGGAAGGGAAGAAGT--TACAGCCGGGACACAGGTGCCCTCGCCAGGCCTTGGCTCTGAGATCAGGTTGAGGCCGTGTACTCTCCAGGCTCCTGTTTCATC----- i aotNan1.NW_018513311v1 I 1214 C 0 s dasNov3.JH576208 1705513 109 + 4416731 CTGAATTGTAATGGAAAGAATATAGATTATAGAGTTAAGGCACA----ACCACAGCATTTGTTGACCGTGTGACTGGGGCAAGTCTGTTCGTTT-----TGttttgttttgtttgagg i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90006900 2539 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e rheMac8.chr13 1432787 416 + 108979918 I a score=87232.000000 s hg38.chr2_KI270774v1_alt 116024 7 + 223625 AGCTGGG s panTro5.chr2A 1405147 7 + 111504155 AGCTGGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1353906 7 + 114371477 AGCTGGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1378445 7 + 1464242 AGCTGGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1102181 7 + 81552678 AGCTGGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1433203 7 + 108979918 AGCTGGG i rheMac8.chr13 I 416 C 0 s macFas5.chr13 1405645 7 - 111193037 AGCTGGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433755 7 + 3644372 AGCTGGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1386982 7 - 10304083 AGCTGGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1460563 7 - 107702431 AGCTGGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 948285 7 - 2200435 AGCTGGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1384057 7 - 13651311 AGCTGGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1378996 7 - 108792865 AGCTGGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1224611 7 - 7082604 AGCTGGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1312702 7 + 1864846 AGCTGGG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 105530 7 + 287728 AGCTGGG i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1705622 7 + 4416731 tactggg i dasNov3.JH576208 C 0 I 1020 e mm10.chr12 90006900 2539 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I a score=453132.000000 s hg38.chr2_KI270774v1_alt 116031 45 + 223625 ATGTAAACAAATCATATCTTGGTTTGGATGTGATGGCCTGTCCGC s panTro5.chr2A 1405154 45 + 111504155 ACATAAACAAATCATGTCTCGGTTTGGATGTGATGGCCTGTCCGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1353913 45 + 114371477 ACATAAACAAATCATGTCTCGGTTTGGATGTGATGGCCTGTCCGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1378452 45 + 1464242 ACATAGACAAATCATGTCTCGGTTTGGATGTGATGGCCTGTCTGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1102188 45 + 81552678 ACATAAACAAATCATGTCTCGGTTTGGATATGATGGCCTGTCAGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1433210 45 + 108979918 ACATAAACAAATCATGTCTTGGTTTGGATGTGACGGCCTGTCAGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1405652 45 - 111193037 ACATAAACAAATCATGTCTTGGTTTGGATGTGACGGCCTGTCAGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433762 45 + 3644372 ACATAAACAAATCATGTCTTGGTTTGGATGTGACGGCCTGTCAGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1386989 45 - 10304083 ACATAAGCAAATCATGTCTTGGTTTGGATGTGACGGCCTGTCAGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1460570 45 - 107702431 ACATAAACAAATCATGTCTTGGTTTGGATGTGACGGCCTGTCAGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 948292 45 - 2200435 ACATAAACAAATCATGTCTTGGTTTGGATGTGACGGCCTGTCAGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1384064 45 - 13651311 ACATAAACAAATCATGTCTTGGTTTGGATGTGATGGCCTGTCAGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1379003 45 - 108792865 ACATAAGCAAATCATGTCTTGGTTTGAATGTGATGGCCTGCAGGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1224618 45 - 7082604 ACATAAGCAAATCATGTCTCGGTTTGGATGTGATGGCCTGTCGGC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1312709 45 + 1864846 ACATTAGCAAATCGTGTCTTGGTTTGGATGTGATGGCCTGTCGGC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 105537 45 + 287728 ACATAAGCAAATCATGTCTCGGTTTGGATGTGATGGCCTGTCGAC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90006900 2539 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I e dasNov3.JH576208 1705629 1020 + 4416731 I a score=783848.000000 s hg38.chr2_KI270774v1_alt 116076 90 + 223625 AATTGTTATGAGAATCCAATTCATTCT-GATTTGGCAGTTTTGTAAAGGGCAAGTCTGTGCCATTTTCCTCATCATTCAATACTGATGCAT s panTro5.chr2A 1405199 90 + 111504155 AATTGTTATGAGAATCCAATTCATTCT-GATTTGGCAGTTTTGTAAAGGGCAAGTCTGTGCCATTTTCCTCATCATTCAATACTGATGCGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1353958 90 + 114371477 AATTGTTATGAGAATTCAATTCATTCT-GATTTGGCAGTTTTGTAAAGGGCAAGTCTGTGCCATTTTCCTCATCATTCAATACTGATGCGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1378497 90 + 1464242 AATTGTTATGAGAATCCAATTCATTCT-GATATGGCAGTTTTGTAAAGGGCAAGTATGTGCCATTTTCCTCATCATTCAATACTGATGCGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1102233 90 + 81552678 AATTGTTAGGAGAATCCAATTCATTCT-GATGTGGCAGTTTTGTAAAGGGCAAGGATACGCCATTTTCCTCATCATTCAATACTGATGCGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1433255 90 + 108979918 AATTGTTATGAGAATCCAATTGACTCT-GATATGACAGTTTTGTAAAGGGCAAGGATTTGCCATTTTCCTCATCATTCAATACTGAAGCAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1405697 90 - 111193037 AATTGTTATGAGAATCCAATTGACTCT-GATACGACAGTTTTGTAAAGGGCAAGGATTTGCCATTTTCCTCATCATTCAATACTGAAGCAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433807 90 + 3644372 AATTGTTATGAGAATCCAATTGACTCT-GATACGACAGTTTTGTAAAGGGCAAGGATTTGCCATTTTCCTCATCATTCAATACTGAAGCAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1387034 90 - 10304083 AATTGTTATGAGAATCCAATTGACTCT-GATACGACAGTTTTGTAAAGGGCAAGGATTTGCCATTTTCCTCATCATTCAATACTGATGCAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1460615 90 - 107702431 AATTGTTATGAGAATCCAATTCACTCT-GATACAGCAGTTTTGTAAAGGGCAAGGATTTGCCATTTTCCTCATCATTCAATACCGATGCAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 948337 90 - 2200435 GATTGTTATGAGAATCCAATTCACTCT-GATACGGCAGTTTTGTAAAGGGCAAGGATTTGCCATTTTCCTCATCATTCAATACTGATGCAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1384109 90 - 13651311 AATTGTTATGAGAATCCAGTTCACTCT-GAGACGGCAGTTTTGTAAAGGGCAAGGATTTGCCATTTTCCTCATCATTCAATACTGATGCAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1379048 89 - 108792865 AATTGTTATGAGAATCAAGTTCATTCA-GATATTGCAGCTTTGTAAAGGGCAAGGATAGGCCGTTCTCCTCGTCATTCGATACTGATGC-T i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1224663 88 - 7082604 AATTGTTAGGAGAATCAAATCTGTTCA-GATATGGCAGCTTTGTAACGGGCAAGGATAGGCCGTTCTCATCGTC-TTCAATACTGATGC-T i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1312754 89 + 1864846 AGTTGTTAGGAAAATCAAATTTGTTCA-GATATGGCTGCTTTGTAAAGGGCAAGGATAGGCCGTTCTCACCATCGTTCAGTACTGATGC-T i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 105582 88 + 287728 GATTGTTATGAGAATCAAATTTGTTCA-GATATGGCAGCTTTGGAAAGGG-AAGGATGAGCCGTTCTCATCATCGTTCAATACTGATGC-T i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1706649 81 + 4416731 AATTGTTA----GATTCAGATGACTATGGATATGAAAGTTTCAGAAA---CAAATTCTGGTCATTTT---CACCTTTCAATATCAGTCCat i dasNov3.JH576208 I 1020 C 0 e mm10.chr12 90006900 2539 - 120129022 I e otoGar3.GL873658 934202 1873 + 5252280 I a score=94019.000000 s hg38.chr2_KI270774v1_alt 116166 10 + 223625 CAC----TTACACC s panTro5.chr2A 1405289 10 + 111504155 CAC----TTACACC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1354048 10 + 114371477 CAC----ttacacc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1378587 10 + 1464242 CAC----TTACACC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1102323 10 + 81552678 CAC----TTACAAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1433345 10 + 108979918 CAC----CTACACC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1405787 10 - 111193037 CAC----CTACACC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433897 10 + 3644372 CAC----CTACACC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1387124 10 - 10304083 CAC----CTACACC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1460705 10 - 107702431 CAC----CTACACC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 948427 10 - 2200435 CAC----CTACACC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1384199 10 - 13651311 CAC----CTACACT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1379137 14 - 108792865 CACTCAGTGACACC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1224751 10 - 7082604 CAC----TGACACC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1312843 10 + 1864846 CAC----TGACACC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 105670 10 + 287728 CAC----TGACACC i aotNan1.NW_018513311v1 C 0 I 55 s otoGar3.GL873658 936075 10 + 5252280 CAC----TTACATC i otoGar3.GL873658 I 1873 C 0 s dasNov3.JH576208 1706730 10 + 4416731 tgt----ttgtatt i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90006900 2539 - 120129022 I a score=344147.000000 s hg38.chr2_KI270774v1_alt 116176 60 + 223625 ------CTATTCCTGTTCCTAAACC-CAg------------------------------------------------------tgaccccgtggac--agcaactgcacatgttttacctgtg-- s panTro5.chr2A 1405299 60 + 111504155 ------CTATTCCTGTTCCTAAACC-CGA------------------------------------------------------TGAccccgtggac--agcaactgcacatgttttacctgtg-- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1354058 60 + 114371477 ------ctattcccgttcctaaacc-cga------------------------------------------------------tgaccccgtggac--agcaactgcacatgttttacctgtg-- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1378597 59 + 1464242 ------CTATTCCCGTTCCT-AACC-CGA------------------------------------------------------TGACCCCATggac--agcaactgcacatgttttacctgtg-- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1102333 60 + 81552678 ------CTATTCCTGTTCCTAAACC-CGA------------------------------------------------------TGAccccgtggac--agcaactgcacatgttttacctgtg-- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1433355 96 + 108979918 ------CTATTCCTGTTCCTAAACC-CGACA------------------ACCCCGTGGACAGCGGTGACCCCGTGGACAGCGGTGAccctgtggac--agcgactgcgcgtgttttccctgtg-- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1405797 96 - 111193037 ------CTATTCCTGTTCCTAAACC-CGACA------------------ACCCCGTGGACAGCGGTGACCCCGTGGACAGCGGTGAccctgtggac--agcgactgcgcgtgttttccctgtg-- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1433907 114 + 3644372 ------CTATTCCTGTTCCTAAACC-CGACAACCCCATGGACAGCGGTGACCCCGTGGACAGCGGTGAccccgtggacagcggtggccctgtggac--agcgactgcgcgtgttttccctgtg-- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1387134 96 - 10304083 ------CTATTCCTGTTCCTAAACC-CGACA------------------ACCCCGTGGACAGCAGTGACCCCGTGGACAGCGgtgaccccgtggac--agcaactgtgcgtgttttccctgtg-- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1460715 78 - 107702431 ------CTATTCCTGTTCCTAAACC-CGAC------------------------------------GACCCCGTGGACAGCGgtgaccccgtggac--agggactgcgcgtgttttccctgtg-- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 948437 96 - 2200435 ------CTATTCCTGTTCCTAAACC-CGACA------------------ACCCCGTGGACAGCGGTGACCCCGTGGACGGCGgtgaccccgtggac--agcgactgcgcgtgttttccctgtg-- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1384209 78 - 13651311 ------CTATTCCTGTTCCTAAACC-CGAA------------------------------------GACCCCGTGGACAGCAgtgaccccgtggac--agcgactgtgcgtgttttccctgtg-- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1379151 58 - 108792865 ------CTGTTTCTATTACGAAACC-TGA------------------------------------------------------TGAGCCCATGAAC--AGCCACTG--CACGTTTTACCTTCG-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1224761 57 - 7082604 ------CAGTTTCTGTTACAGAACC-TGT------------------------------------------------------TGAGCCCATGGAC--AGCCACTG--CAtgttttg-cttcg-- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1312853 60 + 1864846 ------CTGTTTCTATTACAAAACC-TGA------------------------------------------------------tgagcccatggac--agcccctgctcatgttttaccttcg-- i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 936085 62 + 5252280 ------CTCTTCCCTTGAGTTAGTc-cac------------------------------------------------------gtgtcctgtgagcttagtagggctaagggctaggcctgtg-- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1706740 69 + 4416731 catgtctcattctttttattaaatcacaa------------------------------------------------------gctcctcatggac--aggctcagagtctaatttatcttcgtg i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 105680 55 + 287728 I e mm10.chr12 90006900 2539 - 120129022 I a score=1019947.000000 s hg38.chr2_KI270774v1_alt 116236 104 + 223625 cacaccc-cgcagtgcctgtcacattgtctgg--------gacaca-gtagttactcaataaat----------gtctgcttaattaatTAGTAATTAAGTACCAAAGCTACCATAGACAAATA s panTro5.chr2A 1405359 100 + 111504155 cacaccc-cgtagtgcctgtcacattgtctgg--------gacaca-gtagtta----ataaat----------gtctgcttaattaattAGTAATTAAGTACCAAAGCTACCATAGACAAATA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1354118 104 + 114371477 cacaccc-cgcagtgcctgtcacattgtctgg--------gacaca-gtagttactcaataaat----------gtctgcttaattaattAGTAATTAAGTACCAAAGCTACCATAGACAAATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1378656 103 + 1464242 caca-cc-cgcagtgcctgtcacattgtctgg--------gacaca-gtagttactcaataaat----------gtctgcttaattaattAGTAATTAAGTACCAAAGCTACCATAGACAAATA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1102393 104 + 81552678 cacaccc-cgcagtgcccatcacattgtctgg--------gacaca-gtagttactcaataaat----------gtctgcttaattaatTAGTAATTAAGTATCAAAGCTACCATAGACAAATA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1433451 104 + 108979918 cccaccc-cacagtgcctggcacattatctgg--------aacaca-gtagttactcaataaat----------gtctgcttaattaattcgTAATTAAGTGCCAAAGCTACCACAGACAAATA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1405893 104 - 111193037 cacaccc-cacagtgcccggcacattgtctgg--------aacaca-gtagttactcaataaat----------gtctgcttaattaatTCGTAATTAAGTGCCAAAGCTACCACAGACAAATA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1434021 104 + 3644372 cacaccc-cacagtgcccggcacattgtctgg--------aacaca-gtagttactcaataaat----------gtctgcttaattaattcgTAATTAAGTGCCAAAGCTACCACAGACAAATA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1387230 104 - 10304083 cacaccc-cacagtgcccagcacattgtctgg--------aacaca-gtagttactcaataaat----------gtctgcttaattaatTCATAATTAAGTGCCAAAGCTACCACAGACAAATA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1460793 104 - 107702431 cacaccc-cacagtgcctggcacattgtctgg--------aacaca-gtagttactcaataaat----------gtctgcttaattaatTCGTAATTAAGTGCCAAGGCTACCACAGACAAATA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 948533 104 - 2200435 cacaccc-cacagtgcccagcacattgtctgg--------aacaca-gtagttactcaataaat----------gtctgcttaattaatTCGTAATTAAGTGCCAAAGCTACCACAGACAAATA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1384287 100 - 13651311 cacaccc-cgcagtgtccggcatattgtctgg--------aacaca-gtagttactcaataaat----------gtctgcttaattaatTCGTAATTAAGTGCCAAAGCTACCACAGAC----A i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1379209 104 - 108792865 CAtgccc-cgcagtgccggtcacatggtctgg--------gacgca-gtagttactcaatagat----------gtctgctTACTTAAATAGCAATTAGGTACCAAAGCTGCCGTAGAGAAATG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1224818 101 - 7082604 catgccc-cgcagtgcccgtcacacggtctgg--------gacaca-ggaattactcaataaat----------gtctgctTACTTAAGTAGTAATTA---ACCAAAGCTGCCGTAGACAAATG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1312913 104 + 1864846 catgccc-tgcagtgcccgtcacatggcctgg--------gacaca-gcagttactcagtaaat----------gtctgctTACTCAAATAGTAATTAAGTACCAGAGCTGCCATAGACAAATG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 105735 104 + 287728 catgccc-cgcagtgcccgtcacacggtctgg--------gacaca-gtagttactcaacaaac----------gtctgctTATTTAAATAGTAATTAAGTACCAAAGCTGCCATAGACAAATG i aotNan1.NW_018513311v1 I 55 C 0 s otoGar3.GL873658 936147 90 + 5252280 taggttcacacagtgcccagcacactgcctag--------aacatg-gtagtcacttaaggaag----------gcctgcttctttaat---------------gaGGCAACCGTAAATAAATA i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1706809 120 + 4416731 tac-ccc-cagggtgcctggcataCTGTCTGATATTATCCGGTACATGttataattcaataattaatttaattaatCTGTTTAGTTA--TCAAAACCGTGCAACAAAACAGCCATAAAGAAATA i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90006900 2539 - 120129022 I a score=2181431.000000 s hg38.chr2_KI270774v1_alt 116340 174 + 223625 ATC------TATTTTATATCTTCTTTATGTG---CCATAGAAACCTCAAGAAAAGAGGAATCCTTTCTCCAGCTCAGCTTCTGTCTTTTTCCAAACTTCCTGAGCCAACAAGCGGAGTGATTGCCCGAGCAGCAGAGATAATGGAAACATCAATACAAGCGATGAAAAGAAAAGTCAACCTGA s panTro5.chr2A 1405459 171 + 111504155 ATC------TATTTTATATCTTC---ATGTG---CCATAGAAACCTCAAGAAAAGAGGAATCCTTTCTCCAGCTCAGCTTCTGTCTTTTTCCAAACTTCCTGAGCCAACAAGTGGAGTGATTGCCCGAGCAGCAGAGATAATGGAAACATCAATACAAGCGATGAAAAGAAAAGTCAACCTGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1354222 174 + 114371477 ATC------TATTTTATATCTTCTTTATGTG---CCATAGAAACCTCAAGAAAAGAGGAATCCTTTCTCCAGCTCAGCTTCTGTCTTTTTCCAAACTTCCTGAGCCAACAAGTGGAGTGATTGCCCGAGCAGCAGAGATAATGGAAACATCAATACAAGCGATGAAAAGAAAAGTCAACCTGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1378759 173 + 1464242 ATC------TATTTTATATCTTCTTTATGTG---CCATAGAAACCTCAA-AAAAGAGGAATCCTTTCTCCAGCTCAGCTTCTGTCTTTTTCCAAACTTCCTGAGCCAACAAGTGGAGTGATTGCCCGAGCAGCAGAGATAATGGAAACATCAATACAAGCGATGAAAAGAAAAGTCAACCTGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1102497 174 + 81552678 ATC------TATTTTATATCTTCTTTATGTG---CCATAGAAACCTCAAAAAAAGAGGAATCCTTTCTCCAGCTCAGCTTCTGTCTTTTTCCAAACTTCCTGAGCCAACTAGCAGAGTGATTGCTCGAGCAGCAGAGATAATGCAAACATCAATACAAGCGATGAAAAGAAACGTCAACCTGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1433555 174 + 108979918 ATC------TCTTTTATATCTTCTTTATGTG---CCATAGAAACCTCAAAAAAAGAGAAATCCTTTCCCCACATCAGCTTCTGTCTTTTTCCAAACTTCCCGAGCCAACTAGCGGAGAGATTGCCCGAGCAGCAGAGATAATGGAAACATCAATACAAGCGATGAAAAGAAAAGTCAACCTGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1405997 174 - 111193037 ATC------TCTTTTATATCTTCTTTATGTG---CCATAGAAACCTCAAAAAAAGAGAAATCCTTTCCCCACATCAGCTTCTGTCTTTTTCCAAACTTCCCGAGCCAACTAGCGGAGAGATTGCCCGAGCAGCAGAGATAATGGAAACATCAATACAAGCGATGAAAAGAAAAGTCAACCTGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1434125 174 + 3644372 ATC------TCTTTTATATCTTCTTTATGTG---CCATAGAAACCTCAAAAAAAGAGAAATCCTTTCCCCACATCAGCTTCTGTCTTTTTCCAAACTTCCCGAGCCAACTAGCGGAGAGATTGCCCGAGCAGCAGAGATAATGGAAACATCAATACAAGCGATGAAAAGAAAAGTCAACCTGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1387334 174 - 10304083 ATC------TCTTTTATATCTTCTTTATGTG---CCATAGAAACCTCAAAAAAAGAGAAATCCTTTCCCCACATCAGCTTCTGTCTTTTTCCAAACTTCCCGAGCCAACTAGCGGAGAGATTGCCCGAGCAGCAGAGATAATGGAAACATCAATACAAGCGATGAAAAGAAAAGTCAACCTGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1460897 174 - 107702431 ATC------TCTTTTATATCTTCTTTATGTG---CCATAGAAACCTCAAAAAAAGAGAAATCCTTTCCCCACATCAGCTTCTGTCTTTTTCCAAACTTCCCGAGCCAACTAGCGGAGAGATTGCCCGAGCAGCAGAGATAATGGAAACATCAATACAAGCGATGAAAAGAAAAGTCAACCTGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 948637 174 - 2200435 ATC------TCTTTTATATCTTCTTTATGTG---CCATAGAAACCTCAAAAAAAGAGAAATCCTTTCCCCACATCAGCTTCTGTCTTTTTCCAAACTTCCCGAGCCAACTAGCGGAGAGATTGCCCGAGCAGCAGAGATAATGGAAACATCAATACAAGCGATGAAAAGAAAAGTCAACCTGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1384387 174 - 13651311 ATC------TCTTTTATATCTTCTTTATGTG---CCATAGAAACCTCAAAAAAAGAGAAATCCTTTCCCCACATCAGCTTCTGTCTTTTTCCAAACTTCCTGAGCCAACTAGTGGAGAGATTGCCCGAGCAGCAGAGATAATGGAAACATCAATACAAGCGATGAAAAGAAAAGTCAACCTAA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1379313 172 - 108792865 ATC--------TTCTATATCTTCTTTATGTG---CCGCAGAAACCTCAAAAAGAGAGAAATCCTTTCCCCAGCTCAGCTTCTGTCTTTTTCCAAACTTCCTGAGCCAACAAGTGGCGCGATTGCCAGAGCAGCAGAGATAATGGAAACATCAATACAAGCGATGAAAAGAAAAGTCAGCCTGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1224919 174 - 7082604 ATC------TATTCTATATCTTCTTTATGTG---CCATAGAAACCTCCGAAAAAGAGAAATCCTTTCCCCAGCTCAGCTTCTGTCTTTTTCCAAACTTCCTGAGCCAACGAGCGGCGCAATTGCCCGAGCAGCAGAGATAATGGAAACATCAATACAAGCGATGAGAAGAAAAGTCAGCCTGG i saiBol1.JH378218 C 0 I 191 s cebCap1.NW_016107827v1 1313017 174 + 1864846 ATC------TATTCTATGTCTTCTTTATGTG---CCATAGAAACCTCAGGAAAAGAGAAATCCTTTCCCCAGCTCAGCTTCTGTCTTTTTCCAAACGTCCTGAGCCAACAAGTGGCGCAGTTGCCCGAGCAGCAGAGATCATGGAAACATCAATACAAGCGATGAAAAGAAAAGTCAGCCTGG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 105839 173 + 287728 ATC------TATTCTATGTCTTCTTTATGTG---CCATAGAAACCTCAAAAAAAGAGAAATCCTTTCCCCAGCTCAGCTTCTGTCTTTTTCCAAACTTCCTGAA-CAACGAGCGGCGCGATTGCCCGAGCAGCAGAGATAATGGAAACATCAATACAAGCGATGAAAAGAAAAGTCAGCCTGG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 936237 176 + 5252280 AGTAGGTAATTTTTTATCTCCTGTTTAGG------CAAAGAAACCTCAGAAAAAGGGACATCGTTTCCCCAGCTCAGCTTCTCTCTTTCTCCAAACTCGTGGAGCCGACCAGCAGAGCCGTTTCCCGAGCAGCAGAGATAATGGAGACTTCGATGCAGGCGCTGAGAGGAGCCGCCCACCTG- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90009439 157 - 120129022 ATT------TAACTTGTGACTCCTT---ATG---CTCTAGAAACCTCAAGAAAAGGGAAGTCCTTTCTCCAGCCCAGCTTCTCTCTTTCTTTAAGCTGCCCGAGTCCACCAGTGGGGCTATTTCCCGAGCAGCAGAGATTATGGAAACATCAATACAAGTCATGAAACG-------------- i mm10.chr12 I 2539 C 0 s dasNov3.JH576208 1706929 177 + 4416731 GTC------TAGTCCACGTTTTCCTTTTTTTCCCCCATAGAAATCTGAAGAGAAGGGAAATAAATTCTCCAACTCAGCTTCTGTCTTTTTCCAAACTTCCTGAACCAACAAGCCGAGCTATTTCCCGAGCAGCAGAGATAATGGAAACTTCAGTACAAGTGATGAAAAGAAAAGTTGACCTGA i dasNov3.JH576208 C 0 C 0 a score=444998.000000 s hg38.chr2_KI270774v1_alt 116514 48 + 223625 AAACTCAACAATCACAGCATCCAACGGGTA------A----------TGTGTGCCCCTCTCCCC s panTro5.chr2A 1405630 48 + 111504155 AAACTCAACAATCACAGCATCCAACGGGTA------A----------TGTGTGCCCCTCTCCCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1354396 48 + 114371477 AAACTCAACAATCACAGCATCCAACGGGTA------A----------TGTGTGCCCCTCTCCCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1378932 48 + 1464242 AAACTCAGCAATCACAGCATCCAACCGGTA------A----------TGTGTGCCCCTCTCCCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1102671 48 + 81552678 AAACTCAACAATCACAGCATCCAACGGGTA------A----------TGTGTGCCCCTCTCCCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1433729 47 + 108979918 AAATTCAACAATCACAGCATCCAACCGGTA------A----------CGGGCGCCCC-CTCCCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1406171 47 - 111193037 AAATTCAACAATCACAGCATCCAACCGGTA------A----------CGGGCGCCCC-CTCCCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1434299 47 + 3644372 AAATTCAACAATCACAGCATCCAACCGGTA------A----------CGGGCGCCCC-CTCCCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1387508 47 - 10304083 AAATTCAACAATCACAGCATCCAACCGGTA------A----------CGGGCGCCCC-CTCCCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1461071 47 - 107702431 AAATTCAACAATCACAGCATCCAACCGGTA------A----------CGGGCGCCCC-CTCCCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 948811 47 - 2200435 AAATTCAACAATCACAGCATCCAACAGGTA------A----------CGGGCGCCCC-CTCCCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1384561 47 - 13651311 AAATTCAACAATCACAGCATCCAACAGGTA------A----------CGGCCGCCCT-CTCCCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1379485 48 - 108792865 AAACCCAGCAGTCACAGCACCCCACCGGTA------A----------TGCGCGCGCCTCTCCCC i calJac3.chr14 C 0 I 385 s saiBol1.JH378218 1225284 48 - 7082604 AAACTCAGCAGTCACAGCACCCCACCAGTA------A----------TGCGTGCCCACCTCCCC i saiBol1.JH378218 I 191 C 0 s cebCap1.NW_016107827v1 1313191 48 + 1864846 AAACTCAGCAGTCACAGCACCCCACCGGTA------A----------TGCGTGCACGTCTCCCC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 106012 48 + 287728 AAACCCAGCAGTCACGGCACCCCACCGGTA------A----------TGCACGCACCTCTCCCC i aotNan1.NW_018513311v1 C 0 I 257 s otoGar3.GL873658 936413 52 + 5252280 --ACCCAGCGGTCAGGGGGTCCCACAGGTGAGCCCCA----------CACCTGCCCCTCTCTGC i otoGar3.GL873658 C 0 I 1 s mm10.chr12 90009596 26 - 120129022 ----TGAACAGTCACAGTTCTCCACGGGTA---------------------------------- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1707106 58 + 4416731 AACTTAAACAATTGCAGCATCCCACTGGTA------AGCAGACCTCTTGTGTGCCCCTCTCCCC i dasNov3.JH576208 C 0 C 0 a score=10920.000000 s hg38.chr2_KI270774v1_alt 116562 1 + 223625 A s panTro5.chr2A 1405678 1 + 111504155 A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1354444 1 + 114371477 A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1378980 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1102719 1 + 81552678 A i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1433776 1 + 108979918 A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1406218 1 - 111193037 A i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1434346 1 + 3644372 A i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1387555 1 - 10304083 A i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1461118 1 - 107702431 A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 948858 1 - 2200435 A i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1384608 1 - 13651311 A i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1379918 1 - 108792865 A i calJac3.chr14 I 385 C 0 s saiBol1.JH378218 1225332 1 - 7082604 A i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1313239 1 + 1864846 A i cebCap1.NW_016107827v1 C 0 I 647 s dasNov3.JH576208 1707164 1 + 4416731 A i dasNov3.JH576208 C 0 I 2 e aotNan1.NW_018513311v1 106060 257 + 287728 I e mm10.chr12 90009622 0 - 120129022 C e otoGar3.GL873658 936465 1 + 5252280 I a score=83666.000000 s hg38.chr2_KI270774v1_alt 116563 13 + 223625 CTGAGGAGCGGCA s panTro5.chr2A 1405679 13 + 111504155 CTGAGAAGCGGCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1354445 13 + 114371477 CTGAGAAGCGGCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1378981 13 + 1464242 CTGAGAAGCAGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1102720 13 + 81552678 CTGAGAAGCGGCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1433777 13 + 108979918 CTGAGAAGCCGCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1406219 13 - 111193037 CTGAGAAGCCGCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1434347 13 + 3644372 CTGAGAAGCCGCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1387556 13 - 10304083 CTGAGAAGCCGCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1461119 13 - 107702431 CCGAGAAGCCGCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 948859 13 - 2200435 CTGAGAAGCCGCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1384609 13 - 13651311 CTGAGAAGCCGCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1379919 11 - 108792865 CTAGAAGGGCA-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1225333 11 - 7082604 CTAGAAGGGCG-- i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 936466 11 + 5252280 --CAGGAGCCGCA i otoGar3.GL873658 I 1 C 0 s mm10.chr12 90009622 10 - 120129022 ---AGCAGCCGCA i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1707167 13 + 4416731 CTGGGGAGTGACA i dasNov3.JH576208 I 2 C 0 e aotNan1.NW_018513311v1 106060 257 + 287728 I e cebCap1.NW_016107827v1 1313240 647 + 1864846 I a score=6392.000000 s hg38.chr2_KI270774v1_alt 116576 1 + 223625 A s panTro5.chr2A 1405692 1 + 111504155 A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1354458 1 + 114371477 A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1378994 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1102733 1 + 81552678 A i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1433790 1 + 108979918 A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1406232 1 - 111193037 A i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1434360 1 + 3644372 A i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1387569 1 - 10304083 A i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1461132 1 - 107702431 A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 948872 1 - 2200435 A i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1384622 1 - 13651311 A i colAng1.NW_012118821v1 C 0 C 0 s cebCap1.NW_016107827v1 1313887 1 + 1864846 A i cebCap1.NW_016107827v1 I 647 C 0 s otoGar3.GL873658 936477 1 + 5252280 G i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1707180 1 + 4416731 G i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 106060 257 + 287728 I e mm10.chr12 90009632 0 - 120129022 C e saiBol1.JH378218 1225344 0 - 7082604 C e calJac3.chr14 1379930 0 - 108792865 C a score=4968072.000000 s hg38.chr2_KI270774v1_alt 116577 531 + 223625 CTCCCGAAGGAG---------------------GACACCT-------------TGA-CTTTGTGCAGGGGC--------TGCTTGCTCAGGGCATGTTTT-TT-ACTTGAGACCAAGCAGGATGGGACTCCA-GCTCTTTCAAAGCATACAAGCTGCAATTTTT-AAAAATGCTTACCAAACAGTCTCAATATCTTATTTTTGTTACTCTGGAAAATAGCCATTTCTCTCCTATCCAAATCAAATTT-GAGAAGTAGCTCAATAAGCTAAACATCCATTT--TTTAT-GGTATAAAATAATTTAGGAA-TTTTCCCATAGCCCCCCTCTTAGTTAAAACTTGGCAAGC----TCATTCATAAAACCTCTACAGTGAAA---------------GGACTTCATGTGTGAGGCAGCGCATTG--CAGGG--------AGCCCCATCTTCCC--------ACTGAGTTGCTGGTGCCTCAGCAGAACTACCCAGGACAtttgagagccaatttactcatctctaaaatgagg---acagtGGCACTGCTCACTCC----AATGGCTATCAGAAGACC--------AGTGCATAAACCAGGAGCAAATGTCGTCATTTCTTCAGCTCT----AAAGCACTCTA s panTro5.chr2A 1405693 529 + 111504155 CTCCCGAAGGAG---------------------GACGCCT-------------TGA-CTTTGTCCAGGGGC--------TGCTTGCTCAGGGCATGTTTT-TT-ACTTGAGACCAAGCAGGGTGGGACTCCA-GCTCTTTCAAAGCATACAAGCTGCAATTTTT-AAAAATGCTTACCAAACAGTCTCAATATCTTATTTTTGTTACTCTGGAAAATAGCTATTTCTCTCCTATCCAAATCAAATTT-GAAAAGTAGCTCAATAAGCTAAACATCCATTT--TTTAT-GGTATGAAATAATTTAGGAA-TTTTCCCATAGCCCCACTCTTAGTTAAAACTTGGCAAGC----TCATTCATAAAATCTCTTCAGTGAAA---------------GGACTTCATGTGTGAGGCAGCGCATTG--CAGGG--------AGCCCCATCTTCCC--------ACTGAGTTGCTGGTGCCTCAGCAGAACTACCCAGGACCTTTGAGAGCCAATTTACTCATCTC--AAATGAGG---ACAGTGGCACTGCTCACTCC----GATGGCTATCAGAAGACC--------AGTGCATAAACCAGGAGCAAATGTCATTATTTCTTCATCTCT----AAAGCACTCTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1354459 528 + 114371477 CTCCCGAAGGAG---------------------GACGCCT-------------TGA-CTTTGTCCAGGGGC--------TGCTTGCTCAGGGCATGTTTT-TT-ACTTGAGACCAAGCAGGATGGGACTCCA-GCTCTTTCAAAGCATACAAGCTGCAATTTTT-AAAAATGCTTACCAAACAGTCTCAATATCTTATTTTTGTTACTCTGGAAAATAGCTATTTCTCTCCTATCCAAATCAAATTT-GAAAAGTAGCTCAATAAGCTAAACATCCA-TT--TTTAT-GGTATGAAATAATTTAGGAA-TTTTCCCATAGCCCCCCTCTTAGTTAAAACTTGGCAAGC----TCATTCATAAAATCTCTTCAGTGAAA---------------GGACTTCATGTGTGAGGCAGCGCATTG--CAGGG--------AGCCCCATCTTCCC--------ACTGAGTTGCTGGTGCCTCAGCAGAACTACCCAGGACCTTTGAGAGCCAATTTACTCATCTC--AAATGAGG---ACAGTGGCACTGCTCACTCC----GATGGCTATCAGAAGACC--------AGTGCATAAACCAGGAGCAAATGTCATTATTTCTTCAGCTCT----AAAGCACTCTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1378995 531 + 1464242 CTCCCGAAGGAG---------------------GACGCCT-------------TGA-TTTTGTCCAGGGGC--------TGCTTGCTCAGGGCATGTTTT-TTCACTTGAGACCAAGCAGGATGGGACTCCA-GCTCTTTCAAAGCATACAAGCTGCAATTTTT-AAAAATGCTTACCAAACAGTCTCAATATCTTA-TTTTGTTACTCTGGAAAATAGCTATTTCTCTCCTATTCAAATCAAATTT-GAAAACTAGCTCAATAAGCTAAACATCCATTT--TTTAT-GGTATAAAATAATTTAGGAA-TTTTCCCATAGCCCCCTTCTTAGTTAAAACTTGGCGAGC----TCATTCATAAAATCTCTTCAGTGAAA---------------GGACTTCATGTGTCAGGTAGTGCATTG--CAGGg--------agccccatcttccc--------actgagttgctggtgcctcagcagaactacccaggacctttgagagccaatttactcatctctaaaatgagg---acagtggcactgctcACTCC----GATGGCTATCAGAAGACC--------AGTGCATAAACCAGGAGCAAATGTCATCATTTCTTCAGCTCT----AAAGCACTCTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1102734 530 + 81552678 ATCCCGAAGGAG---------------------GACGCCT-------------TGA-CTTTGTCCAGGGGC--------TGCTTGTTCAGGGCATGCTTT-TT-ACTTGA-ACCAAGCAGGATGGGACTCCA-GCTCTTTCAAAGCATACAAGCTGCAATTTTT-AAAAATGCTTACCAAACAGCCTCAATATCTTATTTTTGTTACTCTGGAAAATAGCTGTTTCTCTCCTATTCAAATCAAATTT-GAAAACCAGCTCAAAAAGCTAAACATCCGTTT--TTTAT-GGTATAAAATAATTTAGGAA-TTTTCCCATAGCCCCCCTCTTAGTTAAAACTTGGCGAGC----TCATTCATAAAATCTCTTCAGTGAAA---------------GGACTTCATGTGGGAGGCGGCGCGTCG--CAGGg--------agccccatcttccc--------actgagttgctggtgccttagcagaactacccaggagctttgagagccaatttactcatctctaaaatgagg---acagtagcactgctcACTCT----GATGGCTATCAGAAGACC--------AGTGCATAAACCAGGAGCAAATGTCATTATTTCTTCAGCTCT----AAAGCACTCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1433791 529 + 108979918 CTCCCCAGGGAG---------------------GATGCCT-------------TGATTTTTGTCCAGGGGC--------TGCTTGTTCAGGGCGTGTTTT-TT-ACTTGAGACCGAGCAGGATGGGACTCCA-GCTCTTTCAAAACATACAAGCTGCAATTTTT--AAAATGCTTACCAAACAGTCTCAGTATCTTATTTTTGTTACTCCGGAAAATAGCTGTTTCTCTCCAACTCAAATCAAATTT-GAAAACGAGCTCAATAAGCTAAACATCCG-TT--TGTAT-GGTATAAAATAATTTAGGAATTTTTCCCACAGCCCCCCTCTTAGTTAAAACTTGGCGAGC----TCATTCATAAAACCTCTTCAATGAAA---------------GGACTTCATGTGTGAGGCAGCGTGTTG--CAGGG--------AGCCCCATCTTCC----------CCGagttgctgttgccttagcagagctacctaggacctttgagagccaattgactcatctctaaaatgagg---acagtagcactgctcactcc----gctggctatcggaagacc--------aaCGCATAAACCAGGAGCAAATGTCATTATTTCTTCAGCTCT----AAAGCACTCTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1406233 529 - 111193037 CTCCCCAGGGAG---------------------GATGCCT-------------TGATTTTTGTCCAGGGGC--------TGCTTGTTCAGGGCGTGTTTT-TT-ACTTGAGACCGAGCAGGATGGGACTCCA-GCTCTTTCAAAACATACAAGCTGCAATTTTT--AAAATGCTTACCAAACAGTCTCAGTATCTTATTTTTGTTACTCCGGAAAATAGCTGTTTCTCTCCAACTCAAATCAAATTT-GAAAACGAGCTCAATAAGCTAAACATCCG-TT--TGTAT-GGTATAAAATAATTTAGGAATTTTTCCCACAGCCCCCCTCTTAGTTAAAACTTAGCGAGC----TCATTCATAAAACCTCTTCAATGAAA---------------GGACTTCATGTGTGAGGCAGCGTGTTG--CAGGG--------AGCCCCATCTTCC----------CCGagttgctgttgccttagcagagctacctaggacctttgagagccaattgactcatctctaaaatgagg---acagtagcactgctcactcc----gctggctatcggaagacc--------aaCGCATAAACCAGGAGCAAATGTCATTATTTCTTCAGCTCT----AAAGCACTCTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1434361 529 + 3644372 CTCCCCAGGGAG---------------------GATGCCT-------------TGATTTTTGTCCAGGGGC--------TGCTTGTTCAGGGCGTGTTTT-TT-ACTTGAGACCGAGCAGGATGGGACTCCA-GCTCTTTCAAAACATACAAGCTGCAATTTTT--AAAATGCTTACCAAACAGTCTCAGTATCTTATTTTTGTTACTCCGGAAAATAGCTGTTTCTCTCCAACTCAAATCAAATTT-GAAAACGAGCTCAATAAGCTAAACATCCG-TT--TGTAT-GGTATAAAATAATTTAGGAATTTTTCCCACAGCCCCCCTCTTAGTTAAAACTTGGCGAGC----TCATTCATAAAACCTCTTCAATGAAA---------------GGACTTCATGTGTGAGGCAGCGTGTTG--CAGGG--------AGCCCCATCTTCC----------CCGagttgctgttgccttagcagagctacctaggacctttgagagccaattgactcatctctaaaatgagg---acagtagcactgctcactcc----gctggctatcggaagacc--------aaCGCATAAACCAGGAGCAAATGTCATTATTTCTTCAGCTCT----AAAGCACTCTA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1387570 525 - 10304083 CTCCCGAGGGAG---------------------GACGCCT-------------TGATTTTTGTCCAGGGGC--------TGCTTGTTCAAGGCGTGTTTT-TT-ACTTGAGACCGAGCAGGATGGGACTCCA-GCTCTTTCAAAACATACGAGCTGCAATTTTT--AAAATGCTTACCAAACAATCTCAGTATCTCATTTTTGTTACTCCGGAAAATAGCTGTTTCTCTCCAATTCAAATCAAACTT-GAAA---AGCTCACTAAGCTAAACATCCG-TT--TGTAT-GGTATAAAATAATTTAGGAATTTTTCCCACAGCCCCCC-CTTAGTTAAAACTTGGCGAGC----TCATTCATAAAACCTCTTTAATGAAA---------------GGACTTCATGTGTGAGGCAGCGTGTTG--CAGGG--------AGCCCGGTCTTCC----------CCGagttgctgttgccttagcagagctacctaggacctttgagaaccaattgactcatctctaaaatgagg---acagtagcactgctcACTCC----GCTGGCTATCAGAAGACC--------AATGCATAAACCAGGAGCAAATGTCATTATTTCTTCAGCTCT----AAAGCACTCTA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1461133 521 - 107702431 CTCCCCAGGGAG---------------------GACGCCT-------------TGATTTTTGTCCAGGGGC--------TGCTTGTTCAAGGTGTGTTTT-TT-ACTTGAGACCGAGCAGGATGGGACCCCA-GCTCTTTCAAAACATACGAGCTGCAATTTTT--AAAATGCTTACCAAACAGTCTCAGTATCTTATTTTTGTTACTCCGGAAAATAGCTGTTTCTCTCCAACTCAAATCAAATCT-GAAAACGAGCTCAATAAGCTAAACATCCG-TT--TGTAT-GGTACAAAATAATTTAGGAATTTTTCCCACAGCCCCCC--------GAAACTTGGCGAGC----TCATTCATAAAACCTCTTCAATGAAA---------------GGACTTCATGTGTGAGGCAGTGTATTG--CAGGG--------AGCCCCATCTTCC----------CCGagttgctgttgccttagcagagctacctaggacctttgagagccaactgactcatctctaaaatgagg---acagtagcactgctcactcc----gctggctgtcagaagacc--------aaCGCATAAACCAGGAGCAAATGTCATTATTTCTTCAGCTCT----AAAGCACTCTA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 948873 527 - 2200435 CTCCCCAGGGAG---------------------GACGCCT-------------TGATTTTTGTCCAGGGGC--------TGCTTGTTCAAGGCGTGTTTT-TT-ACTTGAGACCGAGCAGGATGGGACTCCA-GCTCTTTCAAAACATACGAGCTGCAATTTTT--AAAATGCGTACCAAACAGTCTCAGTATCTCATTTTTGTTACTCCGGAAAATAGCTGTTTCTCTCCAATTCAAATCAAACTT-GAAA---AGCTCAATAAGCTAAACATCCG-TT--TGTATGGGTATAAAATAATTTAGGAATTTTTCCCACAGCCCCCCTCTTAGTTAAAACTTGGCGAGC----TCATTCATAAAACCTCTTCAATGAAA---------------GGACTTCATGTGTGAGGCAGCGTGTTG--CAGGG--------AGCCCCATCTTCC----------CCGagttgctgttgccttagcagagctgcctaggacctttgagaaccaattgactcatctctaaaatgagg---acagtagcactgctcACTCC----GCTGGCTATCAGAAGACC--------AATGCATAAACCAGGAGCAAATGTCATTATTTCTTCAGCTCT----AAAGCACTCTA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1384623 526 - 13651311 CTCCCGAGGGAG---------------------GACGCCT-------------AGA-TTTTGTCCAGGGGC--------TGCTTGTTCAAGGCATGCTTT-TT-ACTTGAGACCGAGCAGGATGGGACTCCA-GCTCTTTCAAAACATATGAGCTGCAATTTTT--AAAATGCTTACCAAACAGTCTCAGTATCTTCTTTTTGTTACTCTGGAAAATAGCTGTCTCTCTCCAATTCAAATCAAATTT-GAAAACGAGCTCAATAAGCTAAACATCCA-TT--TGT-T-GGTATAAAATAATTTAGGAATTTTTCCCGTAGCCCCCT-CTTAGTTAAAACTTGGCGAGC----TCATTCATAAAACCTCTTCAATGAAA---------------GGACTTCATGTGTGAGGCAGCGTGTTG--CAGGG--------AGCCCCATCTTCC----------CCGagctgctgttgccttagcagagctgcctaggatctttgagagccaattgactcatctctaacatgagg---acagtagcactgctcACTCC----GCTGGCTGTCAGAAGACC--------AGCGCATAAACCAGGAGCAAATGTCATTATTTCTTCAGCTCT----AAAGCACTCTA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1379930 532 - 108792865 CTCCTGAGGGAG---------------------GACATCG-------------TGA-CTTTGTCCAGGGCT--------TGCTTGTTCAGAGCGTGTTTT-TC-AC-TGAGGCCGAGCAGGCTGGGACTCCA-GCTCTTTCAAAGCACAAAAGCTGGAATTTTA-AAAGATGCTTACCAAACAGTCTCCATATCTTATTTTTGTTAGTCTGGAAAATAGCTGTTTCTCTCCTATTCAAATCAAATTT-GAAAATTAGCTCAATAAGCTAAATATCCA-TT--T-TAT-AGTATAAAATAATTTAGGAA-TGCTCCCATAGCCGTCCTCCTAGTTAAAATTCGGCAAGC----TCCTTCCTAAACCCTCTTCAACGAGA---------------GGACTTGCCGGGTGAGGCAGCGTGTTG--CGGGA--------AGCCCCACCTTCCT--------GCTGAGTTGCTGTTGCCTTAGCGGAGTTCCCCAGGACCTTGGAGAGCCAATCTACTTATCTCTAAGGTGGGG---ACCGTAGCACCGCTCGCTCT----GACGGCTCTCAGAAGGCC--------AGCACATAAGCCAGGAGCAAATGTCAGCATTTCCTTACCTCTTTATAAAGCACTCTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1225344 532 - 7082604 CTCCTGAGGGAG---------------------GACGCCA-------------TGA-CTTTGTCCAGGGCT--------TGCTTGTTCAGAGCGTGTTTT-TC-ACTTGAGGCCGAGCAGCCTGGGACTCTA-GCTCTTTCAAAGCAGAAAAGCAGGAATTTTA-AAAAATGCTTACCAAACAGTCTCCATATCTTATTTTTGTTATTCTGGAAAACAGCTGTTTCTCTCCTATTCAGATCAAATTT-GAAAATTAGCTCTATAAGCCAAACATCCA-TT--T-AAT-GGTATAAAATAATTTAGGAA-TGTTCCCATAGCT-TCCTCCTGCTTAAAAGGTGGCGAGC----TCCTTCATAAACCCTCTTTGACTAGA---------------GGACTTGCCGTGTGAGACAGCGTGTTG--TGGGA--------AGCCCCGTCTCCCC--------ACTGAGCTGCTGTTGCCTGAGCGCAGCTCCCCAGGACCTTGGAGAGCCAATCCACTCACCTCTAAGTTGAGG---ACAGTCCCTCTGCTCACTCT----GACGGCTATCAGAAGGCC--------AGCACATAAGCCAGGAGCAAATGCCAGCATTTCCTCATCTCTTTGTAAAGCACTCTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1313888 532 + 1864846 CTCCTGAGGGAG---------------------GACACCG-------------TGA-CTTTGTCCAGGGCT--------TGCTTGTTCAGAGCGTGTTTT-TC-ACCTGAGGCCAAGCAGGCTGGGACTCCA-GCTTTTTCAAAGCACAAAACCTGGAATTTTT-AAAAATGCTTACCAAACAGTCTCCATATCTTATTTTTGTTATTCTGAAAAATAGCTATTTCTCTCCTATTCAAATCAAATTT-GAAAATTAGCTCAATAAGCTAAACATCCA-TT--T--AT-GGTAGAAAATAATTTAGGAA-TACTCCCATAGCCTTCCTCCTAGTTAAAACTTGGCAAGC----TCCTTCATAAACCCTCTTCGACGAGA---------------GGACCTGCCGTGTGAGGCAGCGTGTTG--TGGGA--------AGCCCCATCTTCCC--------ACTGAGTTGCTGTTGCCTTAGCGGAGCTCCCCAGGACCTTGGAGAGCCAATCTACTCATCTCTAAGGTGAGG---ACAGTAGCTCTGCTCACTCT----GATGGCTATCAGAAGGCC--------AGCGCATAAGCCAGAAGCAAATGTCAGCATTTCCTTATCTGTTTAGAAAGCATTCTA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 106317 533 + 287728 CTCCTGAGGGAG---------------------GACACCG-------------TGA-CTTTGTCCAGGGCT--------TGCTTGTTCAGAGCGTGTTTT-TC-ACTTGAGGCCGAGCAGGCTGGGACTCCG-GCTCTTTCCAAGCACAAAAGCTGGAATTTAA-AAAAATGCTTACCAAACAGTCTCCATATCTTATTTTTGCTATTCTGAAAAATAGCTGTTTCTCTCCTATTCAAATCAAACTT-GAAAATTAGCTCAATAAGCTAAACATCCA-TT--T-TAT-GGTATAAAATAATTTAGGAA-TGCTCCCATAGCCTTCCTCCTAGTTAAAACTTGGCAAGC----TCCTTCATAAACCCTCTTCGACGAGA---------------GACCTTGCCGTGTGAGGCAGCGTGTTG--TGGGA--------AGCCCCGTGTTCCC--------ACCGAGTTCCCGTTGCCTTAGCGGAGATCCCCGGGACCTTGGAGAGCCAATCCGCTCCTCTCTGCGGTGAGG---ACAGCAGCACTGCTCACTCT----GACGGCGATCGGAAGGCC--------AGCGCGTAAGCCAGGAGCAAATGCCAGCATTTCCTTATCTCTTTATAAAGCACTCTA i aotNan1.NW_018513311v1 I 257 C 0 s otoGar3.GL873658 936478 461 + 5252280 ---CTGAGAGGG------------------------------------------------------GGGGT--------TGCTTGTTCAG--------------AC-----ACCAAGCAGGATGCGATTCTG-GCCCCTGTATGGCCTGGAAGCTGCAGTCCTG-TAAACTGCTCACCAG------TCAGTGTCTTATTTTTGTTAGCCTGAAAAATAACTGTTTCTCTACTATTCAAACAAATTTG-GAAAACCAGTTTAGTGAGTTAAACATCCT-GT--TTTAT-GGTATGAAATAATTTAGGGA-TTCTCCCATAGACCCCTGCCCAGTTGGAACTTGGGGAGC----TCACTAGGGAGCCCCTCCCTCT---A---------------GGAC-TCATATGCAGGTAAAAACA--G--CAGGGGACACTCAAGTCCTGGCTTCCC--------ACCAAA--ACTCACAGCCGTGCAGAGCTGCC-AGGGTCCCTAAGAGCCAGCTG-----TCTCTAAGGTGAGG---ACAGTAACACTGGCTGCCCCGGCAGATGGCTGTGGGAAGAAC--------AGAGTATAAAC---------------------ATTCAGC-CT----CCAGAACCCTG i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90009632 426 - 120129022 -------------------------------------------------------------------------------TGCCTCCTCCG-------CCT-CT-GCTTAAATCCA----------------------------------------------TTC-ATAGATTCTTA----------------------TTTTTTGATTCTGTGATATA-CAGTCTCTCTCCTATTCAAATACTATTT-GGAG--------AAACAGCTAAACATGCT-CTAATTGAT-GTTCTAAAACACACTGGGAA-TTTTTCTGTAGCCTTCCCACCTAGTGAAACATGGGGAACACATTCACTCATAAGGGCTTTCTGGGGAGACATTCATTCAGGTTGTGTCTTGTCACAGCAAGCAGAGGACTGGACAGGG--------A-CCTCAACTTCCCAGTTTGTAACCGGGACATT-CTGACTTAGTCTGTTACCCAAGGAA---TAACACCCCATGGGCT--TCCCAACAATGAGA---CTAGT----CTGCAGTTTCT----GACAGTTCACACGGTAGCCACAGTAGAGTACATTTGAAGAAAGCAGAAGCCAGA------------TT----ACAGC-CTCTG i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1707181 541 + 4416731 -CTCCCAGAGAGCAGAGCTATCTGAGCTATCATGCCACCTTCCAACAAAAGACTGA-CTTTGCTCAGAGGTGAGGGGTGGGGTTGCACAGGGCATGCTTTCTT-TCTTGACACCAGGCGGGAGTGGAGTTCATGCTCATTCAGAGCACAAAGGCGGCAGTTCTTCAGAAATACTTACCAAACAGGCACAGTAT-TTCTTTTTGTTAGTCTGGGAAAGAAAGGCTTCTCTGCTATTCGAAGCAAATTTGGAGAAGTAACTCAGTAAGCTAT--------AT--GACAT-GATATGAAATAATTTTGGAA-AATTTCCATCGTTTCCCTA-----TAAAATTTGAGATGC----TCATTGATTTAAGTTCTTTGAGGAAA---------------CATATTTACATGATAGGCAGCATATTA--TTGTG--------AG-----------------------AAGAAGCCAGTGACTTGGTAGAGTTACTCA-GCCCTTTAAGAACCAATTTCCCTACCCCTAAACTGGGAATCACACTGGTCCTGCTCACTCA----GATGACCACTGGCAGACC--------AAAATAAAAGTGAGGAGAAAG--------TTGCGTTACATCT----AAACTACTCTA i dasNov3.JH576208 C 0 I 10429 a score=58323.000000 s hg38.chr2_KI270774v1_alt 117108 5 + 223625 TGGGC s panTro5.chr2A 1406222 5 + 111504155 TGGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1354987 5 + 114371477 TGGGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1379526 5 + 1464242 TGGGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1103264 5 + 81552678 TGGGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1434320 5 + 108979918 TGGAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1406762 5 - 111193037 TGGAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1434890 5 + 3644372 TGGAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1388095 5 - 10304083 TGGAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1461654 5 - 107702431 TGGAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 949400 5 - 2200435 TGGAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1385149 5 - 13651311 TGGAC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1380462 5 - 108792865 TGGGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1225876 5 - 7082604 TGGGC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1314420 5 + 1864846 TGGGC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 106850 5 + 287728 TGGGC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 936939 5 + 5252280 TAGAC i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90010058 5 - 120129022 AGGAC i mm10.chr12 C 0 C 0 e dasNov3.JH576208 1707722 10429 + 4416731 I a score=6088135.000000 s hg38.chr2_KI270774v1_alt 117113 641 + 223625 ATAAGATACTGAGA--------TGGTAATGCAGGCAGTCAAAAGGCATATTG---GTGCTTCCTATGATGCAGAGCAAGTAAGCGAAATGTCTTTTTAATTAATTTATCAAGAA-TT-TTTTCTCTGCAGCGCCATGAGCTACTTGGCCTCTGAGTTCTTCCTTCTAACTAGCTATAGATCAATTTGGTGCTGG-TTACTTAGCTTTTAGAATAAGACAAACTTGGCT-AAATCAGTATTGACCAGAATTCTCAAATCCTAAACT--TAACAGTGAAGTTTAATTAATTTCATAGCAAGC--TAAGATTCACCACTTTGAAATGTCCTTTC-TTTCAAACCATATGGCTGAACGATGTTTCTAAGAACTCTCGGTCCACTGTCCTGTTACGGGACACTGTCCTGTCCACT-GTCCTGTCAG----GCCTCCTATGGAAATGGCAGT------TCCTGACGTCAGAAG---ATGTGGGTCT------TTCTG-GTCCATGCCT-TAGAGCCAC-ATGCTCACTGCCGGGTCTGTAGACATCGATGTTTAGGAGAAT-AGGCTGAGGTA-TTTGGTCCAGGCTATAATGTAGAACTTA------AGGACTCCATAATTTAGAATTTTTTAAAATGATTTCCGTTGTAAGTATAGCCCATCTTGAAAACTTAGAACACGAGGAACCTAAAA-AGGT---------- s panTro5.chr2A 1406227 637 + 111504155 ATAAGATACTGAGA--------TGGTAATGCAGGCAGTCAAAAGGCATATTG---GTGCTTCCTATGATGCAGAGCGAGTCAGCGAAATGTCTTTTTAATTAATTTATCGAGAA-TT-TTTTCTCTGCAGCGCCATGAGCTACTTGGCCTCTGAGTTCTTCCTTCTAACTAGCTATAGATCAATTTGGTGCTGG-TTACTTAGCTTTTAGAATAAGACAAACTTGGCT-AAATCAGTATTGACCAGAATTCTCAAATCCTAAACT--TAACAGTGAAGTTTAATTAATTTCATAGCAAGC--TAAGATTCA----TTTGAAATGTCCTTTC-TTTCAAACCATATGGCTGAACGATGTTTCTAAGAACTCTTGGTCCACTGTCCTGTTATGGGACACTGTCCTGTCCACT-GTCCTGTCAG----GCCTCCTATGGAAATGGCAGT------TCCTGACGTCAGAAG---ATGTGGGTCT------TTCTG-GTCCATGCCT-TAGAGCCAC-ATGCTCACTGCCGGGTCTGTAGACATAGATGTTTAGGAGAAT-AGGCTGAGGTA-TTTGGTCTAGGCTGTAATGTAGAACTTA------AGGACTCCATAATTTAGAATGTTTTAAAATGATTTCCGTTGTGAGCATAGCCCATCTAGAAAATTTAGAACACGAGGAACCTAAAA-AGGT---------- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1354992 638 + 114371477 ATAAGATACTGAGA--------TGGTAATGCAGGCAGTCAAAAGGCATATTG---GTGCTTCCTATGATGCAGAGCGAGTCAGCGAAATGTCTTTTTAATTAATTTATCGAGAA-TT-TTTTCTCTGCAGCGCCATGAGCTACTTGGCCTCTGAGTTCTTCCTTCTAACTAGCTATAGATCAATTTGGTGCTGG-TTACTTAGCTTTTAGAATAAGACAAACTTGGCT-AAATCAGTATTGACCAGAATTCTCAAATCCTAAACT--TAACAGTGAAGTTTAATTAATTTCATAGCAAGC--TAAGATTCA----TTTGAAATGTCCTTTC-TTTCAAACCATATGGCTGAACGATGTTTCTAAGAACTCTTGGTCCACTGTCCTGTTATGGGACACTGTCCTGTCCACT-GTCCTGTCAG----GCCTCCTATGGAAATGGCAGT------TCCTGACATCAGAAG---ATGTGGGTCT------TTCTG-GTCCATGCCT-TAGAGCCAC-ATGCTCACTGCCGGGTCTGTAGACATAGATGTTTAGGAGAAT-AGGCTGAGGTA-TTTGGTCCAGGCTGTAATGTAGAACTTA------AGGACTCCATAATTTAGAATGTTTTAAAATGATTTCCGTTGTGAGCATAGCCCATCTAGAAAATTTAGAACACGAGGAACCTAAAAGAGGT---------- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1379531 637 + 1464242 ATAAGATACTGAGA--------TGGTAATGCAGGCAGTCAAAAGGCATATTG---GTGCTTCCTATGATGCAGAGCAAGTAAGCGAAATGTCTTTTTAATTAATTTATCAAGAA-TT-TTTTCTCTGTAGCACCATGAGCTACTTGGCCTCTGAGTTCTTCCTTCTAACTAGCTATAGATCAATTTGGTGCTGG-TTACTTAGCTTTTAGAATAAGACAAACTTGGCT-AAATCAGTATTGACCAGAATTCTCAAATCCTAAACT--TAACAGTGAAGTTTAATTAATTTCCTAGCAAGC--TAAGATTCA----TTTGAAATGTCCTTTC-TTTCCAACCGTATGGCTGAATGATGTTTCTAAGAACTCTTGGTCCACTGTCCTGTTATGGGACACTGTCCTGTCCACT-GTCCTGTCAG----GCCTCCTATGGAAATGGCAGT------TCCTGACGTCAGAAG---ATGTGGGTCT------TTCTG-GTCCATGCCT-TAGAGCCAC-ATGCTCACTGCTGGGTCTGTAGACATAGATGTTTAGGAGAAT-AGGCTGAGGTA-TTTGGTCCAGGCTATAATGTAGAACTTA------AGGACTCCATAATTTAGAATGTTTTAAAATGATTTCTGTTCTAAGCATAGCCCATCTAGAAAATTTAGAACACGAGGAACCTAAAA-AGGT---------- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1103269 636 + 81552678 ATAAGATACTGAGA--------TGGTAATGCAGGCAGTCAAAAGGCATATTG-----GCTTCCTATGATGGGGAGCAAGTAAGCGAAATGTCTTTTTAATTAATTTATCAAGAATTT-TTTTCTGTGCAGTGCCATGAGCTACTTGGCCTCTGAGTTGTTCCTTCTAACTAGCTCTAGATCAATTTGGTGCTGG-TTACTTAGCTTTTAGAGTAAGACAAACTTGGCT-AAATCAGTATTAACCAGAATTCTCAAATCCTAAACT--TAACAGTGAAGTTTAATTAATTTCATAGCAAGC--TAAGATTCA----TTTGAAATGTCCCTTG-TTTCAAACCATGTGGCTGAACGATGTTTCTAAGGACTCTTGGTCCACTGTCCTGTTACAGGACACTGTCCTGTCCACT-GTCCTGTCAG----GCCTCCTATGGAAATGGCAGT------TCCTGACGTCCGAAG---ATGTGGGTCT------TTCTG-GTCCATGCCT-TAGAGCCAC-ATGCTCACTGCCGGATCTGTAGACATAGATGTTTAGGAGAAT-AGGCTGAGGTA-TTTGGTCCAGGCTACAATGTAGAACTTA------AGGACTCCATAATTCAGAATGTTTTAAAATGATTTCCGTTGTAAGCATAGCCCATCTAGAAAATTTAGAACGCGAGGAACCTAAAA-AGTT---------- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1434325 616 + 108979918 ATAAGATACTGAGA--------TGGTAATGCAGGCAGCCAAAAGGCATATTG---GTGCTTCTTATGATGGGGAGCGAGTAAGCGAAATGTCTTTTTAATTA----ATCAATAA-TT-TTTTCTGTGCAGTGCCATGAGCTACTTGGCCTCTGAGTTCTTCCTTCTAACTAGCTATAGATCAATTTGGTGCTGGTTTACTTAGCTTTTAGAATAAGACAAACTTGGCT-AAACCAGTATTAACCAGAATTCTCAAATCCTAAACT--TAACAGTGAAGTTTAATTAACTTTATAGCAAGC--TAAGATTCA----TTTGAAATGTCCTTTC-TTTCAAACCATGTGACTGAACGATGTTTCTAAGAACTCTTGgtc------------------cactgtcctgtccact-gtcctgtcAG----GCCTCCTATGGAAATAGCAGT------TCCTGACGTCAGAAG---ATATGGGTCT------TTCTG-GTCCATGCTT-TAGAGCCAC-ATGCTCATTGCTGGGTCTGTAGACATAAATGTTTAGGAGAAT-AGGCTGAGGTA-TGTGGTCCAGGCTATAACATAGAACTTA------AGGACTCTATAATTTAGAATATTTTAAAATGATTTCCATTGTAAACATAGCCCATCTAGAAAATTTAGAACGCGAGGAATGTAAAA-AGGT---------- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1406767 616 - 111193037 ATAAGATACTGAGA--------TGGTAATGCAGGCAGCCAAAAGGCATATTG---GTGCTTCTTATGATGGGGAGCGAGTAAGCGAAATGTCTTTTTAATTA----ATCAATAA-TT-TTTTCTGTGCAGTGCCATGAGCTACTTGGCCTCTGAGTTCTTCCTTCTAACTAGCTATAGATCAATTTGGTGCTGGTTTACTTAGCTTTTAGAATAAGACAAACTTGGCT-AAACCAGTATTAACCAGAATTCTCAAATCCTAAACT--TAACAGTGAAGTTTAATTAACTTTATAGCAAGC--TAAGATTCA----TTTGAAATGTCCTTTC-TTTCAAACCATGTGACTGAACGATGTTTCTAAGAACTCTTGgtc------------------cactgtcctgtccact-gtcctgtcAG----GCCTCCTATGGAAATAGCAGT------TCCTGACGTCAGAAG---ATATGGGTCT------TTCTG-GTCCATGCTT-TAGAGCCAC-ATGCTCATTGCTGGGTCTGTAGACATAAATGTTTAGGAGAAT-AGGCTGAGGTA-TGTGGTCCAGGCTATAACATAGAACTTA------AGGACTCTATAATTTAGAATATTTTAAAATGATTTCCATTGTAAACATAGCCCATCTAGAAAATTTAGAACGCGAGGAATGTAAAA-AGGT---------- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1434895 616 + 3644372 ATAAGATACTGAGA--------TGGTAATGCAGGCAGCCAAAAGGCATATTG---GTGCTTCTTATGATGGGGAGCGAGTAAGCGAAATGTCTTTTTAATTA----ATCAATAA-TT-TTTTCTGTGCAGTGCCATGAGCTACTTGGCCTCTGAGTTCTTCCTTCTAACTAGCTATAGATCAATTTGGTGCTGGTTTACTTAGCTTTTAGAATAAGACAAACTTGGCT-AAACCAGTATTAACCAGAATTCTCAAATCCTAAACT--TAACAGTGAAGTTTAATTAACTTTATAGCAAGC--TAAGATTCA----TTTGAAATGTCCTTTC-TTTCAAACCATGTGACTGAACGATGTTTCTAAGAACTCTTGgtc------------------cactgtcctgtccact-gtcctgtcAG----GCCTCCTATGGAAATAGCAGT------TCCTGACGTCAGAAG---ATATGGGTCT------TTCTG-GTCCATGCTT-TAGAGCCAC-ATGCTCATTGCTGGGTCTGTAGACATAAATGTTTAGGAGAAT-AGGCTGAGGTA-TGTGGTCCAGGCTATAACATAGAACTTA------AAGACTCTATAATTTAGAATATTTTAAAATGATTTCCATTGTAAACATAGCCCATCTAGAAAATTTAGAACGTGAGGAATGTAAAA-AGGT---------- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1388100 601 - 10304083 ATAAGATACTGAGA--------TGGTAATGCAGGCAGCCAAAAGGCATATTG---GTGCTTCTTATGATGGGGAGCAAGTAAGCGAAATGTCTTTTTAATTA----ATC---AA-TT-TTTTCTGTGCAGTGCCATGAGCTACTTGGCCTCTGAGTTCTTCCTTCTAACTAGCTATAGATCAATTTGGTGCTGGTTTACTTAGCTTTTAGAATAAGACAAACTTGGCT-AAACCAGTATTAACCAGAATTCTCAAATCCTAAACT--TAACAGTGAAGTTTAATTAACTTCACAGCAAGC--TAAGATTCA----TTTGAAATGTCCTTTC-TTTCAAACCATGTGACTGAACGATGTTTCTAAGAACTCTTG------------------------------GTCCACT-GTCCTGTCAG----GCCTCCTATGGAAATGGCAGT------TCCTGACGTCAGAAG---ATGTGGGTCT------TTCTG-GTCCATGCTT-TAGAGCCAC-ATGCTCATTGCTGGGTCTGTAGACATAAATGTTTAGGAGAAT-AGGCTGAGGTA-TGTGGTCCAGGCTATAACATAGAACTTA------AGGACTCCATAATTTAGAATATTTTTAAATGATTTCCATTGTAAACATAGCCCATCTAGAAAATTTAGAACGCGAGGAAAATAAAA-AGGT---------- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1461659 608 - 107702431 ATAAGATACTGAGA--------TGGTAATACAGGCAGCCAAAAGGCGTATTG---GTGCTTCTTATGATGGGGAGCAAGTAAGCGAAATGTCTTTTTAATTA----ATCAATAA-TT-TTTTCTGTGCAGTGCCATGAGCTACTTGGCCTCTGAGTTCTTCCTTCTAACTAGCTACAGATCAATTTGGTGCTGGTTTACTTAGCTTTTAAAATAAGACAAACTTGGCT-AAACCAGTATTAACCAGAATTCTCAAATCCTGAACT--TAACAGTGAAGTTTAATTAACTTCACAGCAAGC--TAAGATTCA----TTTGAAATGTCCTTTC-TTTCAAACCATGTGACTGAACGATGTTTCTAAGAACTCTTGGTC------------------CACCATCCTGTCCACT-GTCCTGCCAG----GCCTCCTGTGGAA--------------TCCTGACGTGAGAAG---ATGTGGGTCT------TTCTG-GTCCATGCTT-TAGAGCCAC-ATGCTCATTGCTGGGTCTGTAGATATAAATGTTTAGGAGAAT-AGGCTGAGGTA-TTTGGTCCAGGCTATAACATAGAACTTA------AGGACTCCATAATTTAGAATATTTTAAAATGATGTCCATTGTAAACATAGCCCATCTAGAAAATTTAGAACGCGAAGAATGTAAAA-AGGT---------- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 949405 616 - 2200435 ATAAGATACTGAGA--------TGGTAATGCAGGCAGCCAAAAGGCATATGG---GTGCTTCTTATGATGGGGAGCAAGTAAGCGAAATGTCTTTTTAATTA----ATCAATAA-TT-TTTTCTGTGCAGTGCCATGAGCTACTTGGCCTCTGAGTTCTTCCTTCTAACTAGCTATAGATCAATTTGGTGCTGGTTTACTTAGCTTTTGGAATAAGACAAACTTGGCT-AAACCAGTATTAACCAGAATTCTCAAATCCTAAACT--TAACAGTGAAGTTTAATTAACTTCACAGCAAGC--TAAGATTCA----TTTGAAATGTCCTTTC-TTTCAAACCATGTGGCTGAATGATGTTTCTAAGAACTCTTGGTC------------------CACTGTCCTGTCCATT-GTCCTGTCAG----GCCTCCTATGGAAATGGCAGT------TCCTGACGTCAGAAG---ATGTGGGTCT------TTCTG-GTCCATGCTT-TAGAGCCAC-ATGCTCATTGCTGGGTCTGTAGACATAAATGTTTAGGAGAAT-AGGCTGAGGTA-TGTGGTCCAGGCTATAACATAGAACTTA------AGGACTCCATAATTTAGAATATTTTTAAATGATTTCCATTGTAAACATAGCCCATCTAGAAAATTTAGAACGTGAGGAAAGTAAAA-AGGT---------- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1385154 617 - 13651311 ATAAGATACTGAGA--------TGGTAATGCAGGCAGTCAAAAGGCATATTG---GTGCTTTTTATGATGGGGAGCAAGTAAGTGAAATGTCTTTTTAATTA----ATCAATAATTT-TTTTCTGTGCAGTGCCATGAGCTACTTGGCCTCTGAGTTCTTCCTTCTAACTAGCTATAGATCAATTTGGTGCTGGTTTACTTAGCTTTTAGAATAAGACAAACTTGGCT-AAACCAGTATTAACCAGAATTCTCAAATCCTAAACT--TAACAGTGAAGTTTAATTAACTTCACAGCAAGC--TAAAATTCA----TTTGAAATGTCCTTTC-TTTCAAACCATGTGGCTGAACGATGTTTCTAAGAACTCTTGGCc------------------cactgtcctgtccact-gtcctgtcAG----GCCTCCTATGGAAATGGCAGT------TCCTGACATCAGAAG---ATGTGGGTCT------TTCTG-GTCCATGCTT-TAGAGCCAC-ATGCTCATTGCTGGGTCTGTAGACATAAATGTTTAGGAGAAT-AGGCTGAGGTA-TTTGGTCCAGGCTATAACATAGAACTTA------AGGACTCCATAATTTAGAATATTTTAAAATGATTTCCATTGTAAGCATAGCCCATCTAGAAAATTTAGAATGTGAGGAATGTAAAA-AGGT---------- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1380467 598 - 108792865 ATAAGATACTGAGC--------TGGTAACACAGGGAGTA-AAAGGCATATTT---GTGGTTCCCGTGATGGGGAGCAAGGAAGCGAAATGTCTTTTTAATTAATTTATCAAGGT-TA-TTTTCTGTGCAGTGTCATGAGCTACTTGGCCTCTGAGTTCTTCCTTCTAACTAGCTATAAATTAATTCAGTGCTGGTTTACTTAGCTTTTAGAATAAGACAAACTTGGCT-AAACCAGTACTAACCAGAATTCTCAAATCCTAAACT--TAACAGTGAAGTTTGATTAATTTCACGGCAACC--TTAGATTCA----TGTGAAATGCCTTTTC-TTTCAAA-CATGTGGCTGAACGATGCTTTTGAGAGC-TTTAATC------------------CACAGTCCTGTCACAG-GTCCCGCCAG----GCCTCCTGTGGAAATGGCAGC------TCCTGGCGTCAGAAG---ATGTGGGTCT------TTCCG-GTCCGTGTTT-TAGGGACAC-ATGCCCGTTGCTGGGTCTGTAGAGACAGATGTTTAGGGGAG---------------------CAGGCTACCATGTAGAACTTA------AGGACTCCATAGTTTTGAATGCTTTAAAATGATTTCCATTGTAAGCACAGCGAATCTAGAAAATTTAGAGTGCGAGGAATGTAGAA-AGCT---------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1225881 597 - 7082604 ATAAGACACTGAGG--------TGGTAACACAGACAGTC-AAAGGCGTATTT---GTGGTTCCTGTGATGGGGAGCACGGAAGCGAAATGTCTTTTTAATTAATTTATCAAGAT-TA-TTTTCTGTGCAGTGTCATGAGCTACTTGGCCTCTGAGTTCTTCCTTCTAACTAGCTATAAATCCATTCGGTGCTGGTTTACTTAGCTTTTAGAATAAGACGAACGTGGCT-AAACCAGTACTAACCAGAATTCTCAAATCCTAAACT--TAACAGTGAAGTTTAATTCATTTCATGGCAACC--TAAGATTCA----TTTGAAATACCGTTTC-TTTCAAA-CATGTGGCTGAGCGATGCTTTCAAGAAC-TTTGGTC------------------CACAGTCCCGACACGG-GTCCCGCCA-----GCCCCCTGTGGAAATGGCAGG------TCCTGGTGTCAGAAG---ATGTGGGTCT------TTCCG-ATCCCTGTTT-TAGAGACAC-TTGCCCGTTGCCGGGTCTGTAGAGACAGATGTTTAGGGGAG---------------------CAGGCTATCGTGGAAAACTTA------AGGATTCCATAATTTAGAATGTTTTAAAATGATTTCCGTTGTAAGCACAGCCAATCTAGAAAATTTAGAATTCAAGGAACGTACAA-AGGT---------- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1314425 599 + 1864846 ATAAGATACTGAGC--------TGGTAACACAGGCAGTCAAAAGGCATATTT---GTGGTTCCTGTGATGGGGAGCAAGGAAGCGAAATGTCTTTTTAATTAATTAATCAAGAT-TA-TTTTCTGTGCAGTGTCATGAGCTACTTGGCCTCTGAGTTCCTCCTTCTAACTAGCTATAAATCAATTCAGTGCTGGTGTGCTTAGCTTTTAGAATAAGACAAACTTGGCT-AAACCAGTACTAACCAGAATTCTCAAATCCTAAACT--TAACAGTGAAGTTTAATTAATTTAATGGCAACC--TTAGATTCA----TTTGAAATGCCTTTTC-TTTCAAA-CATGTGGCTGAGTGATGCTTTCAAGAACTTTTGGTC------------------CACAGTCCTGTCACGG-GTCCCGCCAG----GCCCCCTATGGAAATGGCAGC------TCCTGGCGTCAGAAG---ATGTGGGTCA------TTCCT-GTCCCCGTTT-TAGAGACAC-TTGCCCGTTGCTGGGTCTGTAGAGACAGATGTTTAGGGGAG---------------------CAGGCTATCATGGAGAACTTA------AGGACTCCATAATTTAGAATGTTGTAAAATGATTT-CGTTGTAAGCATAGCCAATCTAGAAAATTTAGAATGCAAGGAACGTAAAA-ATGC---------- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 106855 599 + 287728 ATAAGATACTGAGC--------TGGTAACACGGGCAGTCAGAAGGCATATTA---GTGGTTCCTGTGATGGGGAGCAAGGAAGCGAAATGTCTTCTTAGTTAATTTATCAAGAT-TA-TTTTCTGTGCAGTGTCATGAGCTACTTGGCCTCTGAGTTCTTCCTTCTAACTCGCTATAAATCAATTCGCTGCTGGTTTACTTGGCTTTTAGAATAAGACAAACTTGGCT-AAACTAGTGCTAACCAGAATTCTCAAATCCTAAACT--TAACAGTGAAGTTTAATTAATTTCATGGCAACC--TAAGATTCA----TTTGAAAGGCCTTTTC-TTTCAAA-CATGTGGCCAAACGATGCTTTCGAGAAC-TTTGGTC------------------CACAGTCCTGTCACGG-GTCCCGCCAG----GCCCCCTATGGAAATGGCAGC------TCCTGGCGTCAGAAG---ATGTGGGTCT------TTCTG-GTCCCTGTTT-TAGAGACAC-TTGCCCGTTGCCGGGTCTGTAGAGACAGATGTTTAGGGGAG---------------------CAGGCTATCACGTAGAACTTA------AGGACTCCATAATTTAGAATGTTTCAAAATGATTTCCATTGTAAGCATAGCCAATCCAGAAAATTTAGAATGCGAGGAACGTAAAA-AGCT---------- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 936944 550 + 5252280 ATAGGATACTGAGAAGCTGAGGTGACAACCAGCGCTCCCATGAAGTGCAGTT---GTAATTCTGGCAGTG-GGAACCAGAGAGTAA---GTCCTTGCAATGGA---CTTAAAGA-GT-CTCCCACTGCAGTGCCATGAACAACTTGCTGTCCACGCTCTTCCTTCCAACCAGCTCTGGGTTAATT-AGTGCTGATTCACTCCTCTTTTAAAATAAGACAAACTTGGCA-AAATCAGAATTAA-CAGAATTCTCATATCCTAAACTTGTAATAGTTCAGTTTAATTGATTTTATAGCAACC--AAAGATGCT----CTTGAAATGG-TTTTG-TTTCAAACCACAAAATTGAAAAATGTCTCTAAGGAATTCTGGTC------------------CCAGGCCCTGCCCTGC-AATGAGCTGG----GC--CCTGCAGA-------------------GACCCCAGA----------------------TCTG-GTCCCAATCTGCAGAGTCCT-CTTCTGGT--CCAGATCTGTGAGTGCAGGCGTTTAGGA-----------------------------------ATAGAACCT--------------CATAATGTAGAATGCTGTAAAATGATTTCCATTATGACCACAGCCCGGCTGGAGGGCTTAGAAAGTGACAGGAGCCAAA-TCAA---------- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90010063 569 - 120129022 CTGAGATGCTGAAG--------CAAAAGTGGATCCAGTCCAAAGATGTATCA----TAACTTCTATGGTGCCACACTCAAAAATAAGCTTTCTATTTAACGACCTCAGTGAGAT-TTATTTCCAGTGCAGTGTTGTGAGCTATTTGATCTCT-----------------------TAAATTAATCTGGTGCTGCTTTGCCTG---------ATGAGATGAACTCACTTCAAGCCAGTATTAATCACAATTCTCCGATCCTACACT--GAATAGTTAAGTTCAACTCGT---ACAGCAACCCATAAAGTCAC----TCTGAAAAAAGGTTTCATTTCAGACCACATAGTTGAAAGACCTTTCTAAGTCCATTTGGTC------------------------CCTATCCAGGAGTGACATCAGCTTAGACAGTGGTAGAAGTGATGGTAGGGTGACCTGTCCTCAG--G---ATGGGAGTCTACTGGCTCCTGCTTCCGTATCT-TAGGGCTCT-CAGCCCA-------------GGGAGAAAGCATTGCAAAGA----------------------CAGGCCATAATGTGAAATTGATAATGTAAAATACCCTAA---AGGATATGTTAAAGTTATTTACATTATAGACTTAGCCACTCTGTAGCATTTAAGATATAAGGAAGGTAAGC-TGAT---------- i mm10.chr12 C 0 I 200 s dasNov3.JH576208 1718151 564 + 4416731 ataagacattaaGA--------TGATAATAATTTTAAAGGTAAGGCATATTTTTTGTAACTTCTATGATTGGAAACTAGAAAGCAAGATTTTCTTTTAAAGAAC------AGAT-TT-TTTTCAGTGCTGTACCATGAGCTACTTAGGCTTTTAGATCTTCCTCCTAATTATCTATAGATTAATTTATTGCTCA-TTACCT--------------------------T-AGA-----------------------------------GAGTAGTTAGGTTTAATTGACTTTCTGACAAGC--AAAGATTCA----TTTGAAAGAGTTTTTG-TTTCAAACCATCTAGTCTAAAAATGCGTCTACAGCCTCTTGGTC------------------TATTTTCCTGTCTAGA-ATAAGGGAAG----AT----TCAAAAAGAAACTTT------CTCTGGTGTTAGAAGTTAGTGTAGGTCT-------TCTG-ATCCATACTC-TAGAATTTCAATTCTCATTTCCCAGGCCAGTGGTGTAGGCAATTAGGGAGGTCAGGCAGATGTGTTTTAGTCCAGGGCATAAAGTAAAATGTG------AGAACACCTTAACTTAGGTTTTCT----ATTATTTCCATTATAAAAATAGCCAATTTAGAACATTTAGAATGACATAAATGTAAAA-GAACCTGAGATACT i dasNov3.JH576208 I 10429 C 0 a score=135022.000000 s hg38.chr2_KI270774v1_alt 117754 13 + 223625 TT-----CCCATTACTTC s panTro5.chr2A 1406864 13 + 111504155 TT-----CCCATTACTTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1355630 13 + 114371477 TT-----CCCATTACTTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1380168 13 + 1464242 TT-----CCCATTACTTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1103905 13 + 81552678 TT-----CCCATTACTTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1434941 13 + 108979918 TT-----CCCATTACTTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1407383 13 - 111193037 TT-----CCCATTACTTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1435511 13 + 3644372 TT-----CCCATTACTTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1388701 13 - 10304083 TT-----CCCATTACTTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1462267 13 - 107702431 TT-----CCCATTACTTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 950021 13 - 2200435 TT-----CCCATTACTTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1385771 13 - 13651311 TT-----CCCATTACTTC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1381065 18 - 108792865 TCCCCGTCCCGTCGCTTC i calJac3.chr14 C 0 I 7 s saiBol1.JH378218 1226478 13 - 7082604 TC-----CCCGTTACTTC i saiBol1.JH378218 C 0 I 10 s cebCap1.NW_016107827v1 1315024 12 + 1864846 TC-----CCCGTTACTT- i cebCap1.NW_016107827v1 C 0 I 1 s aotNan1.NW_018513311v1 107454 13 + 287728 TC-----CCCGTTACTTC i aotNan1.NW_018513311v1 C 0 I 98 s otoGar3.GL873658 937494 13 + 5252280 TC-----CTTGTCACTTC i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1718715 13 + 4416731 CC-----CTTATCACTTC i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90010632 200 - 120129022 I a score=505448.000000 s hg38.chr2_KI270774v1_alt 117767 67 + 223625 ATCACCAAGCCAGAATT-CCATTAAAGGTCAGTGCCTGTCCTTCTAGGCTGCTCCTTCATGTTGGTCT s panTro5.chr2A 1406877 67 + 111504155 ATCACCAAGCCAGAATT-CCATTAAAGGTCAGTGCCTGTCCTTCTAGGCTGCTCCTTCATGTTGGTCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1355643 67 + 114371477 ATCACCAAGCCAGAATT-CCATTAAAGGTCAGTGCCTGTCCTTCTAGGCTGCTCCTTCCTGTTGGTCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1380181 67 + 1464242 ATCACCAAGCCAGAATT-CCATTAAAGGTCAGTGCCTGTCCTTCTACGCTGCTCCTTCATGTTGGTCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1103918 67 + 81552678 ATCACAAAGCCAGGACT-CCATTAAAGGTCAGTGCCTGTCCTTCTAGGCTGCTCCTTCACGTTGGTCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1434954 67 + 108979918 ATCACCAAGGCAGGACT-CCATTAAATGTCAGTGCCTGTCCTTCTAGGCTGCTGCTTCACATTGATCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1407396 67 - 111193037 ATCACCAAGGCAGGACT-CCATTAAATGTCAGTGCCTGTCCTTCTAGGCTGCTGCTTCACGTTGGTCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1435524 67 + 3644372 ATCACCAAGGCAGGACT-CCATTAAATGTCAGTGCCTGTCCTTCTAGGCTGCTGCTTCACGTTGGTCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1388714 67 - 10304083 ATCACCAAGCCAGGACT-CCATTAAATGTCAGTGCCTGTCCTTCTAGGCTGCTGCTTCACGTTGGTCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1462280 67 - 107702431 ATCACCAAGCCAGGACT-CCATTAAATGTCAGCGCCTGTCCTTCTAGGCTGCTGCTTCACGTTGGTCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 950034 67 - 2200435 ATCACCAAGCCAGGACT-CCATTAAATGTCAGTGCCTGTCCTTCTAGGCTGCTGCTTCACGTTGGTCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1385784 67 - 13651311 ATCACCAAGCCAGGACT-CCATTAAAGGTCAGTGCCTGTCCTTCTAGGCTGCTGCTTCACGCTGGTCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1381090 66 - 108792865 TTCACCAAGCACTGACT-CCAAGAAATGGCAGCGCCTCTCCTTCTAGACTGTT-CTTCACGTTACTCC i calJac3.chr14 I 7 C 0 s saiBol1.JH378218 1226501 36 - 7082604 ATCACCAAGCAATGACT-CCATGAAATGGCAGTGCCT------------------------------- i saiBol1.JH378218 I 10 C 0 s cebCap1.NW_016107827v1 1315037 67 + 1864846 ATCACCAAGCAATGACT-CCATGAAATGGCAGTGCCTCTCCTTCTAGACTATTCCTTCATGTTAGTCT i cebCap1.NW_016107827v1 I 1 I 24 s otoGar3.GL873658 937507 47 + 5252280 CCCACCAAGTAGTAACT--------------GTGCC-------CAGTGCTGCCCCCTCGCCTGGGTTC i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1718728 64 + 4416731 ATCTCCTGGTAATAACTATTATTAAATATTAGTGTCTCTCCTTCTGGGCAGTTTCTTCAGATTG---- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 107467 98 + 287728 I e mm10.chr12 90010632 200 - 120129022 I a score=134999.000000 s hg38.chr2_KI270774v1_alt 117834 23 + 223625 TGTGTGTTACATGACTATGACCT s panTro5.chr2A 1406944 23 + 111504155 TGTGTGTTACATGACTATGACCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1355710 23 + 114371477 TGTGTGTTACATGACTATGACCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1380248 23 + 1464242 TGTGTGTTACATGACTATGACCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1103985 23 + 81552678 TGTGTGTTACATGACTATGACCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1435021 23 + 108979918 TGTGTCTTATGTGGCTATAACCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1407463 23 - 111193037 TGTGTATTATGTGACTGTAACCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1435591 23 + 3644372 TGTGTATTATGTGACTATAACCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1388781 23 - 10304083 TGTGTATTATGTGACTATAACCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1462347 23 - 107702431 TGTGTATTACGTGACTATAACCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 950101 23 - 2200435 TGTGTATTGTGTGACTATAACCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1385851 23 - 13651311 TGTGTATTACGTGACTGTAACCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1381156 19 - 108792865 ----CATTACATGACTGTGACCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1226537 9 - 7082604 --------------CTGTGACCT i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 937554 20 + 5252280 ---TGGTCAGCCAGCTGTGACCA i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 107467 98 + 287728 I e mm10.chr12 90010632 200 - 120129022 I e cebCap1.NW_016107827v1 1315104 24 + 1864846 I e dasNov3.JH576208 1718792 0 + 4416731 C a score=2960.000000 s hg38.chr2_KI270774v1_alt 117857 3 + 223625 CAT s panTro5.chr2A 1406967 3 + 111504155 AAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1355733 3 + 114371477 AAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1380271 3 + 1464242 AAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1104008 3 + 81552678 AAT i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1381175 3 - 108792865 AGT i calJac3.chr14 C 0 C 0 s otoGar3.GL873658 937574 3 + 5252280 CAT i otoGar3.GL873658 C 0 I 4 e aotNan1.NW_018513311v1 107467 98 + 287728 I e mm10.chr12 90010632 200 - 120129022 I e saiBol1.JH378218 1226546 0 - 7082604 C e cebCap1.NW_016107827v1 1315104 24 + 1864846 I e dasNov3.JH576208 1718792 0 + 4416731 C e colAng1.NW_012118821v1 1385874 0 - 13651311 C e manLeu1.NW_012103754v1 950124 0 - 2200435 C e chlSab2.chr14 1462370 0 - 107702431 C e cerAty1.NW_012000820v1 1388804 0 - 10304083 C e macNem1.NW_012011978v1 1435614 0 + 3644372 C e macFas5.chr13 1407486 0 - 111193037 C e rheMac8.chr13 1435044 0 + 108979918 C a score=18758.000000 s hg38.chr2_KI270774v1_alt 117860 20 + 223625 AGttcttttcttcttttttt s panTro5.chr2A 1406970 20 + 111504155 AGttcttttctttttttttt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1355736 20 + 114371477 AGttcttttctttttttttt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1380274 20 + 1464242 AGttcttttcttcttttttt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1104011 20 + 81552678 AGTTCttttttttttttttt i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1381178 20 - 108792865 GGTTCTTTTCTATTGCACAT i calJac3.chr14 C 0 C 0 s dasNov3.JH576208 1718792 8 + 4416731 ------TTTTTTTT------ i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 107467 98 + 287728 I e mm10.chr12 90010632 200 - 120129022 I e saiBol1.JH378218 1226546 0 - 7082604 C e cebCap1.NW_016107827v1 1315104 24 + 1864846 I e otoGar3.GL873658 937577 4 + 5252280 I e colAng1.NW_012118821v1 1385874 0 - 13651311 C e manLeu1.NW_012103754v1 950124 0 - 2200435 C e chlSab2.chr14 1462370 0 - 107702431 C e cerAty1.NW_012000820v1 1388804 0 - 10304083 C e macNem1.NW_012011978v1 1435614 0 + 3644372 C e macFas5.chr13 1407486 0 - 111193037 C e rheMac8.chr13 1435044 0 + 108979918 C a score=6057.000000 s hg38.chr2_KI270774v1_alt 117880 16 + 223625 tt----------gttgagatgaagtc s panTro5.chr2A 1406990 20 + 111504155 tt-t-----tttgttgagatgaagcc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1355756 21 + 114371477 tttt-----tttgttgagatgaagcc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1380294 17 + 1464242 tt---------tgttgagacggagtc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1104031 26 + 81552678 ttttttttgtttgttgagatgaagtc i nomLeu3.chr19 C 0 C 0 s dasNov3.JH576208 1718800 16 + 4416731 ----------TTAATTAGCTGTGGTC i dasNov3.JH576208 C 0 I 26 e aotNan1.NW_018513311v1 107467 98 + 287728 I e mm10.chr12 90010632 200 - 120129022 I e saiBol1.JH378218 1226546 0 - 7082604 C e cebCap1.NW_016107827v1 1315104 24 + 1864846 I e otoGar3.GL873658 937577 4 + 5252280 I e calJac3.chr14 1381198 0 - 108792865 C e colAng1.NW_012118821v1 1385874 0 - 13651311 C e manLeu1.NW_012103754v1 950124 0 - 2200435 C e chlSab2.chr14 1462370 0 - 107702431 C e cerAty1.NW_012000820v1 1388804 0 - 10304083 C e macNem1.NW_012011978v1 1435614 0 + 3644372 C e macFas5.chr13 1407486 0 - 111193037 C e rheMac8.chr13 1435044 0 + 108979918 C a score=148914.000000 s hg38.chr2_KI270774v1_alt 117896 173 + 223625 tcgctctgtcgcccaggctggagtgcagtggggcgatctcggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcctgagtaactgggactacaggcactcaccaccacacccggctaattttttgtatttttagtagagacggggtttcacca s panTro5.chr2A 1407010 173 + 111504155 tcgctctgtcgcccaggctggagtgcagtggggcgatctcggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcctgagtagctaggactacaggcactcaccaccacacccggctaattttttgtattttcagtagagacggggtttcaccg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1355777 173 + 114371477 tcgctctgtcgcccaggctggagtgcagtggggcgatctcggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcctgagtagctaggactacaggcactcaccaccacacccggctaattttttgtattttcagtagagacggggtttcaccg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1380311 172 + 1464242 tcgctctgtcgcccaggctggagtgcagtggggcgatcttggctcactgcaagctccgcctcccgggttcacaccattctcctgcctcagcctcctgagtagctgggactacaggcgcccaccaccacacccggctaa-tttttgtatttttagtagagatggggtttcaccg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1104057 173 + 81552678 tctctctcttgcccagcctggagtgcagtggcgccatcttggctcactgcaagctccacctcctgggttcacgccattctcctgcctcagcctcctaagtagctgggattacaggtgcccaccaccacacccagctaattttttgtatttttagtagagccggggtttcaccg i nomLeu3.chr19 C 0 C 0 e aotNan1.NW_018513311v1 107467 98 + 287728 I e mm10.chr12 90010632 200 - 120129022 I e saiBol1.JH378218 1226546 0 - 7082604 C e cebCap1.NW_016107827v1 1315104 24 + 1864846 I e otoGar3.GL873658 937577 4 + 5252280 I e dasNov3.JH576208 1718816 26 + 4416731 I e calJac3.chr14 1381198 0 - 108792865 C e colAng1.NW_012118821v1 1385874 0 - 13651311 C e manLeu1.NW_012103754v1 950124 0 - 2200435 C e chlSab2.chr14 1462370 0 - 107702431 C e cerAty1.NW_012000820v1 1388804 0 - 10304083 C e macNem1.NW_012011978v1 1435614 0 + 3644372 C e macFas5.chr13 1407486 0 - 111193037 C e rheMac8.chr13 1435044 0 + 108979918 C a score=82823.000000 s hg38.chr2_KI270774v1_alt 118069 97 + 223625 tgttagccaggatggtctcgatctcctgacctcgtaatccaccctctttggcctcccaaagtgctgggattacaggcgtgagccaccgtacccggcc s panTro5.chr2A 1407183 97 + 111504155 tgttagccaggatggtctcgatctcctgacctcgtaatccaccctctttggcctcccaaagtgctgggattacaggcgtgagccaccgtacccggcc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1355950 97 + 114371477 tgttagccaggatggtctcgatctcctgacctcgtaatccaccctctttggcctcccaaagtgctgggattacaggcgtgagccaccgtacccggtc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1380483 97 + 1464242 tgttagccaggatggtctcgatctcctgacctcgtgatccaccctctttggcctcccaaagtgccgggattacaggcgtgagccactgcacccggcc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1104230 97 + 81552678 tgttagccaggatggtctcgatctcctgacctcatgatccaccttccttggcctcccaaagtgctgggattacaggcgtgagccaccacacccggcc i nomLeu3.chr19 C 0 C 0 s mm10.chr12 90010832 33 - 120129022 TGTTGACCAGCAAAAGTTCGGTCTCT-------------------------------------------TTACAGG--------------------- i mm10.chr12 I 200 C 0 e aotNan1.NW_018513311v1 107467 98 + 287728 I e saiBol1.JH378218 1226546 0 - 7082604 C e cebCap1.NW_016107827v1 1315104 24 + 1864846 I e otoGar3.GL873658 937577 4 + 5252280 I e dasNov3.JH576208 1718816 26 + 4416731 I e calJac3.chr14 1381198 0 - 108792865 C e colAng1.NW_012118821v1 1385874 0 - 13651311 C e manLeu1.NW_012103754v1 950124 0 - 2200435 C e chlSab2.chr14 1462370 0 - 107702431 C e cerAty1.NW_012000820v1 1388804 0 - 10304083 C e macNem1.NW_012011978v1 1435614 0 + 3644372 C e macFas5.chr13 1407486 0 - 111193037 C e rheMac8.chr13 1435044 0 + 108979918 C a score=11521.000000 s hg38.chr2_KI270774v1_alt 118166 2 + 223625 AA s panTro5.chr2A 1407280 2 + 111504155 AA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1356047 2 + 114371477 AA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1380580 2 + 1464242 AA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1104327 2 + 81552678 AG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1435044 2 + 108979918 AA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1407486 2 - 111193037 AA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1435614 2 + 3644372 AA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1388804 2 - 10304083 AA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1462370 2 - 107702431 AA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 950124 2 - 2200435 AA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1385874 2 - 13651311 AA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1226546 2 - 7082604 AG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 107467 98 + 287728 I e mm10.chr12 90010865 0 - 120129022 C e cebCap1.NW_016107827v1 1315104 24 + 1864846 I e otoGar3.GL873658 937577 4 + 5252280 I e dasNov3.JH576208 1718816 26 + 4416731 I e calJac3.chr14 1381198 0 - 108792865 C a score=26481.000000 s hg38.chr2_KI270774v1_alt 118168 3 + 223625 TGG s panTro5.chr2A 1407282 3 + 111504155 TGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1356049 3 + 114371477 TGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1380582 3 + 1464242 TGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1104329 3 + 81552678 TGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1435046 3 + 108979918 TGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1407488 3 - 111193037 TGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1435616 3 + 3644372 TGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1388806 3 - 10304083 TGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1462372 3 - 107702431 TGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 950126 3 - 2200435 TGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1385876 3 - 13651311 TGG i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1226548 3 - 7082604 TGG i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 107565 3 + 287728 TGG i aotNan1.NW_018513311v1 I 98 C 0 e mm10.chr12 90010865 0 - 120129022 C e cebCap1.NW_016107827v1 1315104 24 + 1864846 I e otoGar3.GL873658 937577 4 + 5252280 I e dasNov3.JH576208 1718816 26 + 4416731 I e calJac3.chr14 1381198 0 - 108792865 C a score=191463.000000 s hg38.chr2_KI270774v1_alt 118171 21 + 223625 TTCTTTTCTATCGCACATGAT s panTro5.chr2A 1407285 21 + 111504155 TTCTTTTCTATTGTACATGAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1356052 21 + 114371477 TTCTTTTCTATTGTACATGAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1380585 21 + 1464242 TTCTTTTCTATTGCACATGAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1104332 21 + 81552678 TTCTTTTCTATTGCACATGAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1435049 21 + 108979918 TTCTTTTCTATTGCACATGAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1407491 21 - 111193037 TTCTTTTCTATTGCACATGAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1435619 21 + 3644372 TTCTTTTCTATTGCACATGAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1388809 21 - 10304083 TTCTTTTCTATTGCACATGAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1462375 21 - 107702431 TTCTTTTCTATTGCACATGAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 950129 21 - 2200435 TTCTTTTCTATTGCACATGAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1385879 21 - 13651311 TTCTTTTCTATTGCACATGAT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1226551 21 - 7082604 TTCTTTTCTATTGCACAAGAT i saiBol1.JH378218 C 0 I 3 s cebCap1.NW_016107827v1 1315128 21 + 1864846 TTCTTTTCTATTGCACAAGAT i cebCap1.NW_016107827v1 I 24 C 0 s aotNan1.NW_018513311v1 107568 21 + 287728 TTCTTTTCCATTGCACAAGAT i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90010865 7 - 120129022 --------------ACTTGAT i mm10.chr12 C 0 C 0 e otoGar3.GL873658 937577 4 + 5252280 I e dasNov3.JH576208 1718816 26 + 4416731 I e calJac3.chr14 1381198 0 - 108792865 C a score=136856.000000 s hg38.chr2_KI270774v1_alt 118192 12 + 223625 TTGTTGTCTGCA s panTro5.chr2A 1407306 12 + 111504155 TTGTTGTCTGCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1356073 12 + 114371477 TTGTTGTCTGCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1380606 12 + 1464242 TTGTTGTCTGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1104353 12 + 81552678 TTGTTGTCTGCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1435070 12 + 108979918 TTGTTGTCTGCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1407512 12 - 111193037 TTGTTGTCTGCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1435640 12 + 3644372 TTGTTGTCTGCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1388830 12 - 10304083 TTGTTGTCTGCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1462396 12 - 107702431 TTGTTGTCTGCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 950150 12 - 2200435 TTGTTGTCTGCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1385900 12 - 13651311 TTGTTGTCTGCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1381198 12 - 108792865 TTGTTGTCTGCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1226575 12 - 7082604 TTTTTGTCTGCA i saiBol1.JH378218 I 3 C 0 s cebCap1.NW_016107827v1 1315149 12 + 1864846 TTGTTGTCTGCA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 107589 12 + 287728 TTGTTGTCTGCA i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90010872 12 - 120129022 TTGCTGTGCTCT i mm10.chr12 C 0 C 0 e otoGar3.GL873658 937577 4 + 5252280 I e dasNov3.JH576208 1718816 26 + 4416731 I a score=296399.000000 s hg38.chr2_KI270774v1_alt 118204 37 + 223625 AGCACCTGCTTGAGGGCATTCCTGTCAAGAAGAATCT s panTro5.chr2A 1407318 37 + 111504155 AGCACCTGCTTGAGGGCATTCCTGTCAAGAAGAATCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1356085 37 + 114371477 AGCACCTGCTTGAGGGCATTCCTGTCAAGAAGAATCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1380618 37 + 1464242 AGCACCTGCTTGAGGGCATTCCCGTCAAGAAGAATCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1104365 37 + 81552678 AGCACCTGCTTGAGGGCATTCCTGTCAAGAAGAATCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1435082 37 + 108979918 AGCACCTGCTTGAGGACATTCCTGTCAAGAAGAATCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1407524 37 - 111193037 AGCACCTGCTTGAGGACATTCCTGTCAAGAAGAATCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1435652 37 + 3644372 AGCACCTGCTTGAGGACATTTCTGTCAAGAAGAATCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1388842 37 - 10304083 AGCACCTGCTTGAGGACATTCCTGTCAAGAAGAATCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1462408 37 - 107702431 AGCACCTGCTTGAGGACATTCCTGTGAAGAAGAATCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 950162 37 - 2200435 AGCACCTGCTTGAGGACATTCCTGTCAAGAAGAATCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1385912 37 - 13651311 AGCACCTGCTTGAGGACATTCCTGTCAAGAAGAATCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1381210 31 - 108792865 AGCACCTGCTCA------TCCCTGTCATGAAGAACAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1226587 23 - 7082604 AGCACCTGCTCA--------------AGGACTTCCCT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1315161 37 + 1864846 TGCACCTGCTCAAGGACTTCCCTGTCGCGAAGAACCT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 107601 37 + 287728 AGCACCCGCTCAAGGACTTCCCTGTCATGAAGAACCT i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90010884 12 - 120129022 AGC----------------------CAATAAGGA--- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1718842 36 + 4416731 AGCATATGTGTGAGCATTTTTCTGTCATAAAGATTT- i dasNov3.JH576208 I 26 C 0 e otoGar3.GL873658 937577 4 + 5252280 I a score=668560.000000 s hg38.chr2_KI270774v1_alt 118241 80 + 223625 GTGCTCAGCTTTTTGAAGAA--TGCGTA--ATCCTCCACTAACTGAATGCACACTGCAG-TCCAAGGTTTACTTAACTGTTCCCA s panTro5.chr2A 1407355 80 + 111504155 GTGCTCAGCTTTTTGAAGAA--TGCGTA--ATCCTCCACTAACTGAATGCACACTGCAG-TCCAAGGTTTACTTAACTGTTCCCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1356122 80 + 114371477 GTGCTCAGCTTTTTGAAGAA--TGCGTA--ATCCTCCACTAACTGAATGCACACTGCAG-TCCAAGGTTTACTTAACTGTTCCCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1380655 80 + 1464242 GTGCTCAGCTTTTTGAAGAA--TGCGTA--ATCCTCCACTAACTGAATGCACACTGCAG-TCCAAGGTTTACTTAACTCTTCCCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1104402 80 + 81552678 GTGCTCAGCTTTTTGAAGAA--TGCATA--ATCCTCCACTAACTGAATGCACACTGCAG-TCCAAGGTTCACTTAACTGTTCCCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1435119 80 + 108979918 GTGCTCAGCTTTTTGAGGAA--TGCCTA--TTCCTGCACTAACTGAATGCACACTGCAG-TCCGAGGTTTGCTTAACTGTTCCCG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1407561 80 - 111193037 GTGCTCAGCTTTTTGAGGAA--TGCCTA--TTCCTGCACTAACTGAATGCACACTGCAG-TCCGAGGTTTGCTTAACTGTTCCCG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1435689 80 + 3644372 GTGCTCAGCTTTTTGAGGAA--TGCCTA--TTCCTGCACTAACTGAATGCACACTGCAG-TCCGAGGTTTGCTTAACTGTTCCCG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1388879 80 - 10304083 GTGCTCAGCTTTTTGAGGAA--TGCCTA--TTCCTGCACTAACTGAATGCACACTGCAG-TCCGAGGTTTGCTTAACTGTTCCCG i cerAty1.NW_012000820v1 C 0 I 1206 s chlSab2.chr14 1462445 80 - 107702431 GTGCTCAGCTTTTTGAGGAA--TGCCTA--TTCCTGCAGTAACTGAATGCACACTGCAG-TCCGAGGTTTGCTTAACTGTTCCCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 950199 80 - 2200435 GTGCTCAGCTTTTTGAGGAA--TGCCTA--TTCCTGCACTAACTGAATGCACACTGCAG-TCCGAGGTTTGCTTAACTGTTCCCG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1385949 80 - 13651311 GTGCTCAGCTTTTTGAGGAA--TGCCTA--TTCCTCCACTAACTGAACGTGCACTGCAG-TCCAAGGTTTACTTCACTGTTCCCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1381241 78 - 108792865 GTGCTTGGCTTTTCAAGGAA---GGCTG--GTCCTCCCCTAAC--AGTGCTCACTGCTGCCCCAGGGTTTACCTGACGGTCCCCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1226610 76 - 7082604 GTGCTTGGCTTTTTGAGGAA---GCCTG--ATCCTCCCCTGACTGAATGCTCACTGCAGCCCCACGGTTTACCT----GTCTCCA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1315198 80 + 1864846 GTGCTTGGCTTTTCGAGGAA---GGCTG--ATCCTCCCCTAACTGAATGCTCACTGCAGCCCCAGGGTTTGCCTAACTGTCCCCA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 107638 80 + 287728 GTGCTCGGCTCTTCCAGGAA---GGCTG--ATCCTCCCCTAGCTGAATGCTCGCTGCAGCCCCAGGGTTTACCTAACTGTCCCCA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 937581 79 + 5252280 GCACTCACCCTTCTGAGGAACCTGCACACTGTCCTCTGTTAACTGTACACCCCTCACAG---CAGGGTCTGCTGGAC-GTCCG-- i otoGar3.GL873658 I 4 C 0 s mm10.chr12 90010896 28 - 120129022 ------------------------------------------------GCACATGGCCT---------TTATACAGCTGACCCAC i mm10.chr12 C 0 I 2 s dasNov3.JH576208 1718878 80 + 4416731 GTATTCATTATTTTAAGTAA--TGTATA--GTTCTTCATTAACTGAATGCAAATTGTAG-TTGAAAGTTTATCTAACCATTTCCT i dasNov3.JH576208 C 0 C 0 a score=7678694.000000 s hg38.chr2_KI270774v1_alt 118321 761 + 223625 TAGAGCCATTCCCGTT--GGACTGTTAGTGAGCATTCATGAT----TGAAAGACTAG-TTTGTTTCTCCCATATCTGAAAATGGAA---TGCATTCCTTCCTGGC---T-TTTTTTTCTGTTGAATA--------------------------------------------------------------------------------------------TCTCAATTTCACTGGTATCTTGTTAATCAAAGTTTTGTGGCATTATCCTCAAAGATTTATATAAAC-----------CATATTGGAGAAGTAATCGATGATTACCTCTACTAATGGACAATAAAGCCACTCTCACCTTGATTTGTTGAATAACATATAAATTATAGTGACAGAATTAATCC---A---------------AAAAAA--------AGAAAAA---CA-----------------GGAAATTGTTTCCTGGGTTCTCGTCTCATCTGGAAAGATTTACA--AGGGAACCAAAAA-TCAATACAAAGGAAAAACGAAAGG--TTTTATAGATAAGCGT--ACCATCTTCATCA--------AG----GCAAGA-TTTTTTCTACATTAGGGTTCGGGATAAATTCTA-CTC-CTCACTG-TCTTCTAAAGCACTGGGGCCATTACTAGGCACACATGCCTCA-CTGTTCGAATATGATGAATGA------------------GCCCTGGAGATGTGCTTAGTGAGAGTTGATGGTAACTGCAA--A--G----TTACTTGCTGGCTTATCCCCCTGAGGGCTGAGAGCTCCTAGATT-GCTTTTCTGAAAGATCACAGAGCAAAAAT--AAATTTTAAAACCCC---------------------CACATTTCTAGCAATAAGGAAGCTCAAGGGAATTAAATGAGTGAGCACTTGATGTAAAGGGAGAAGGCAGATTTTCTC------AAAAACAGTGACCCCAGTTACATATGAAT s panTro5.chr2A 1407435 761 + 111504155 TAGAGCCATTCCCATT--GGACTGTTAGTGAGCATTCATGAT----TGAAAGACTAG-TTTGTTTCTCTCATATCTGAAAATGGAA---TGCATTCCTTCCTGGC---T-TTTTTTTCTGTTGAATA--------------------------------------------------------------------------------------------TCTCAATTTCACTGGTATCTTGTTAATCAAAGTTTTGTGGCATTATCCTCAAAGATTTATATAAAC-----------CATGTTGGAGAAGTAATCGATGATTACCTCTACTAATGGACAATAAAGCCACTCTCACCTTGATTTGTTGAATAACATATAAATTACAGTGACAGAATTAATCC---A---------------AAAAAA--------AAAAAAA---CA-----------------GGAAATTGTTTCCTGGGGTCTCGTCTCATCTGGAAAGATTTACA--AGGGAACCAAAAA-TCAATACAAAGGAAAAATGAAAGG--TTTTATAGATAAGCGT--ACCATCTTCATCA--------AG----GCAAGA-TTTTTTCTACATTAGGGTTCAGGATAAATTCTA-CTC-CTCACTG-TCTTCTAAAGCACTGGGGCCATTACTAGGCACACATGCCTCG-CTGTTCAAATGTGATGAATGA------------------GCCCTGGAGATGTGCTCAGTGAGAGTTGATGGTAACTGCAA--A--G----TTACTTGCTGGCTTATCCCCCTGAAGGCTGAGAGCTCTTAGATT-GCTTTTCTGAAAGATCACAGAGCAAAAAC--AAATTTTAAAACCCC---------------------CACATTTCTAACAATAAGGAAGCTCAAGGGAATTAAATGAGTGAGCACTTGATGTAAAGGGAGAAGGCAGATTTTCCC------AAAAACAGTGACCCCAGTTACATATGAAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1356202 759 + 114371477 TAGAGCCATTCCCATT--GGACTGTTAGTGAGCATTCATGAT----TGAAAGACTAG-TTTGTTTCTCTCATATCTGAAAATGGAA---TGCATTCCTTCCTGGC---T-TTTTTTTCTGTTGAATA--------------------------------------------------------------------------------------------TCTCAATTTCACTGGTATCTTGTTAATCAAAGTTTTGTGGCATTATCCTCAAAGATTTATATAAAC-----------CATGTTGGAGAAGTAATCGATGATTACCTCTACTAATGGACAGTAAAGCCACTCTCACCTTGATTTGTTGAATAACATATAAATTACAGTGACAGAATTAATCC---A---------------AAAAAA----------AAAAA---CA-----------------GGAAATTGTTTCCTGGGGTCTCGTCTCATCTGGAAAGATTTACA--AGGGAACCAAAAA-TCAATACAAAGGAAAAATGAAAGG--TTTTATAGATAAGCGT--ACCATCTTCATCA--------AG----GCAAGA-TTTTTTCTACATTAGGGTTCAGGATAAATTCTA-CTC-CTCACTG-TCTTCTAAAGCACTGGGGCCATTACTAGGCACACATGCCTCG-CTGTTCAAATGTGATGAATGA------------------GCCCTGGAGATGTGCTCAGTGAGAGTTGATGGTAACTGCAA--A--G----TTACTTGCTGGCTTATCCCCCTGAAGGCTGAGAGCTCTTAGATT-GCTTTTCTGAAAGATCACAGAGCAAAAAC--AAATTTTAAAACCCC---------------------CACATTTCTAACAATAAGGAAGCTCAAGGGAATTAAATGAGTGAGCACTTGATGTAAAGGGAGAAGGCAGATTTTCCC------AAAAACAGTGACCCCAGTTACATATGAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1380735 758 + 1464242 TAGAGCCATTCCCATT--GGACTGTGAGTGAGCATTCATGAT----TGAAAGACTAG-TTTGTTTCTCTCATATCTGAAAATGGAA---TGCATTCCTTCCTGGC--TT-TTTTTTTCTGTTGAATA--------------------------------------------------------------------------------------------TCTCAATTTCACTGGTATCTTGTTAATCAAG--TTTGTGGCATTATCCTCAAAGATTTATATAAAC-----------CATATTGGAGAAGTAATCGATGATTACTTCTACTAATGGACAATAAAGCCACTCTCACCTTGATTTGTTGAATAACATATAAATTACAGTGACAGAATTAATCC---A---------------AAAAAA----------AAAAA---CA-----------------GGAAATTGTTTCCTGGGCTCTCGTCTCATCTGGAAAGATTTACA--AGGGAACCAAAAA-TCAATACAAAGGAAAAATGAAAGG--TTTTATAGATAAGCAT--ACCATCTTCATCA--------AG----GCAAGA-TTTTTTCTACATTAGGGTTCGGGATAAATTCTA-CTC-CTCACTG-TCTTCTAAAGCACTGGGGCCATTACTAGGCACACATGCCTCA-CTGTTCAAATGTGATGAATGA------------------GCCCTGGAGATGTGCTCAGTGAGAGTTGATGGTAACTGCGA--A--G----TTACTTGCTGGCTTATCCCCCTGAAGGCTGAGAGCTCTTAGATT-GCTTTTCTGAAAGATCACAGAGCAAAAAC--AAATGTTAAAACCCC---------------------CACATTTCTAGCAATAAGGAAGCTCAAGGGAATTAAATGAGTGAGCACTTGATGTAAAGGGAGAAGGCAGATTTTCTC------AAAAACAGTGACCCCAGTTACATATGAAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1104482 761 + 81552678 TAGAGCCATTCCCATT--GGACTGTTAGTGAGCATTCATGAT----TGAAAGACTAG-TTTGTTTCTCTCATATCTGAAAATGGAA---TGCATTCCTTCCTGGC---T-TTTTTTTCTATTGAATA--------------------------------------------------------------------------------------------TCTCAATTTCACTGGTATCTTGTTAATCAAAGTTTTGTGGCATTATCCTCAAAGATTTATATAAAC-----------CATCTTGGAGAAGTAATCAATGATTACCTCTACCAATGGACAATAAAGCCACTCTCACTTTGATTTGTTGAATAACATATAAATTATACTGACAGAATTGATAC---A---------------AAAAAA--------AAAAAAC---CA-----------------GGAAATTGTTTCCTGGGCTCTCGTCTCATCTGGAAAGGTTTACA--AGGGAACCAAACA-TCAATACAAAGGAAAAATGAAAGG--TTTTATAGATAAGTGT--ACCATCTTCATCA--------AG----GCAAGA-TGTTTTCTACATTAGGGTTCAGGATAAATTCTA-CTC-CTCACTG-TCTTCTGAAGCACTGGGGCTGTTACTAGGCACACATGCCTCA-CTGTTCCAATGTGATGAATGC------------------GCCCTGGAGATGTGCTCAGTGAAAGTTGATGGTAACTGCAA--A--G----TTACTTGCTGACTTATCCCCCTGAGGGCTGAGAGCTCTTAGATT-GCTTTTCTGAAAGATCACAGAGCAAAAAT--AAATTTTAAAACCCC---------------------CACATTTCTAGCAATAAGGAAGCTCAAGGGAATTAAATGAGTGAGCACTTGATGTAAAGGGAGAAGGCAGATTTTCTC------AAAAACAGTGACCCCAGTTACATATGAAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1435199 756 + 108979918 TAGAGCCATTCCCATT--GGCCTATTAGTGAGCATTCATGAT----TGAAAGACTAG-TTTGTTTCTCTCATATCTGAAAATGGAA---TGAATTCCTTCCTGGC-----TTTTTTTCTATTGAATA--------------------------------------------------------------------------------------------TCTCAATTTCACTGGTATCTGGTTAATCCAAGTTTTGTAGCATTATCCTCAAAGATTTATATAAAC-----------CGTCTTGGAGAAGTAATCCATGATTACCTCTACTAATGGACAGTAAAGTCACTCTCACTTTGATTTGTTGAATAACATATAAATTATAGTGACAGAATTGATCC-----------------------AA--------AAAAAAA---CA-----------------GGAAATCGTTTCGTGGGCTCTCGTCTCATCTGGAAAGATTTACA--AGGGAACCAAAAA-TCAATACAAAGGAAAAATAAAAGG--TTTTATAGATAAGCGT--ACCATCTTCATCA--------AG----GCAAGATTTTTTTCTACATTAGGGTTCGGGATAAATTCTA-CTC-CTCACTG-TCTTCTAAAGCACTGGGGCCGTTACTAGGCACACATGCCTCA-CTGTGCAGTTGTGCTGAATGA------------------GCCCTGGAGATGTGCTCAGTGAGGGTTGATGGTAACTGCGA--A--G----TTACTTGCTGGCTTATCCCCCTGGGGGCTGAGAGCTTTTGGATT-GCTTTTCTGAAAGATCACAGAGCAAAAAT--AAATTTAAAAAACCC---------------------CACATTTCTAGCAATAAGGAAGCTCAAGAGAATTAAATGAGTGAGTACTTGATGTAAAGGGAGAAAGCAGATTTTCTC------AAAAACAATGACTCCAGTTACATATGAAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1407641 756 - 111193037 TAGAGCCATTCCCATT--GGCCTATTAGTGAGCATTCATGAT----TGAAAGACTAG-TTTGTTTCTCTCATATCTGAAAATGGAA---TGAATTCCTTCCTGGC-----TTTTTTTCTATTGAATA--------------------------------------------------------------------------------------------TCTCAATTTCACTGGTATCTGGTTAATCCAAGTTTTGTAGCATTATCCTCAAAGATTTATATAAAC-----------CGTCTTGGAGAAGTAATCCATGATTACCTCTACTAATGGACAGTAAAGTCACTCTCACTTTGATTTGTTGAATAACATATAAATTATAGTGACAGAATTGATCC-----------------------AA--------AAAAAAA---CA-----------------GGAAATTGTTTCGTGGGCTCTCGTCTCATCTGGAAAGATTTACA--AGGGAACCAAAAA-TCAATACAAAGGAAAAATAAAAGG--TTTTATAGATAAGCGT--ACCATCTTCATCA--------AG----GCAAGATTTTTTTCTACATTAGGGTTCGGGATAAATTCTA-CTC-CTCACTG-TCTTCTAAAGCACTGGGGCCGTTACTAGGCACACATGCCTCA-CTGTGCAGTTGTGCTGAATGA------------------GCCCTGGAGATGTGCTCAGTGAGGGTTGATGGTAACTGCGA--A--G----TTACTTGCTGGCTTATCCCCCTGGGGGCTGAGAGCTTTTGGATT-GCTTTTCTGAAAGATCACAGAGCAAAAAT--AAATTTAAAAAACCC---------------------CACATTTCTAGCAATAAGGAAGCTCAAGAGAATTAAATGAGTGAGTACTTGATGTAAAGGGAGAAAGCAGATTTTCTC------AAAAACAATGACTCCAGTTACATATGAAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1435769 757 + 3644372 TAGAGCCATTCCCATT--GGCCTATTAGTGAGCATTCATGAT----TGAAAGACTAG-TTTGTTTCTCTCATATCTGAAAATGGAA---TGAATTCCTTCCTGGA-----TTTTTTTCTATTGAATA--------------------------------------------------------------------------------------------TCTCAATTTCACTGGTATCTGGTTAATCCAAGTTTTGTAGCATTATCCTCAAAGATTTATATAAAC-----------CGTCTTGGAGAAGTAATCCATGATTACCTCTACTAATGGACAGTAAAGTCACTCTCACTTTGATTTGTTGAATAACATATAAATTATAGTGACAGAATTGATCC----------------------AAA--------AAAAAAA---CA-----------------GGAAATTGTTTCGTGGGCTCTCGTCTCATCTGGAAAGATTTACA--AGGGAACCAAAAA-TCAATACAAAGGAAAAATAAAAGG--TTTTATAGATAAGTGT--ACCATCTTCATCA--------AG----GCAAGATTTTTTTCTACATTAGGGTTCGGGATAAATTCTA-CTC-CTCACTG-TCTTCTAAAGCACTGGGGCCGTTACTAGGCACACATGCCTCA-CTGTGCAGTTGTGCTGAATGA------------------GCCCTGGAGATGTGCTCAGTGAGGGTTGATGGTAACTGCGA--A--G----TTACTTGCTGGCTTATCCCCTTGGGGGCTGAGAGCTTTTGGATT-GCTTTTCTGAAAGATCACAGAGCAAAAAT--AAATTTAAAAAACCC---------------------CACATTTCTAGCAATAAGGAAGCTCAAGAGAATTAAATGAGTGAGTACTTGATGTAAAGGGAGAAAGCAGATTTTCTC------AAAAACAATGACTCCAGTTACATATGAAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1390165 775 - 10304083 TAGAGCCATTCCCATT--GGCCTGTTAGTGAGCATTCATGAT----TGAAAGACTAG-TCTGTTTCTCTCATATCTGAAAATGGAA---ACCTTTCCTTCCTGGC-----TTTTTTTCTATTGAATA--------------------------------------------------------------------------------------------TCTCAATTTCACTGGTATCTGGTTAATCCAAGTTTTGTAGCATTATCCTCAAAGATTTATATAAATCTTTGGATTTACGTCTTGGAGAAGTAATCCATGATTACCTCTACTAATGGACAGTAAAGTCACTCTCACTTTGATTTGTTGAATAACATATAAATTATAGTGACAGAATTGATCCaaaa---------------aaaaaa--------aaaaaaa---CA-----------------GGAAATAGTTTCGTGGGCTCTCGTCCCATCTGGAAAGATTTACA--AGGGAACCAAAAA-TCAATACAAAGGAAAAATGAAAGG--TTTTATAGACAAGCGT--ACCATCTTCATCA--------AG----GCAAGATTTTTTTCTACATTAGGGTTTGGGATAAATTCTA-CTC-CTCACTG-TCTTCTAAAGCCCTGGGGTCATTGCTAGGCACACATGCCTCA-CTGTGCAGTTGTGCTGAATGA------------------GCCCTGGAGATGTGCTCAGTGAGGGTTGATGGTAACTGCGA--A--G----TTACTTGCTGGCTTATCCCCCTGGGGGCTGAGAGCTTTTAGATT-GCTTTTCTGAAAGATCACAGAGCAAAAAT--AAATTTTAAAACCCC---------------------CACATTTCTAGCAATAAGGAAGCTCAAGAGAATTAAATGAGTGAGTACTTGATGTAAAGGGAGAAAGCAGATTTTCTC------AAAAACAATGACCCCAGTTACATATGAAT i cerAty1.NW_012000820v1 I 1206 C 0 s chlSab2.chr14 1462525 763 - 107702431 TAGAGCCATTCCCATT--GGCCTGTTAGTGAGCATTCATGAT----TGAAAGACTAG-TTTGTTTCTCTCATATCTGAAAATGGAATGTATTTTCCTTCCCGGCT-----TTTTTTTCTATTAAATA--------------------------------------------------------------------------------------------TCTCAATTTCACTGGTATCTGGTTAATCCAAGTTTTGTAGCATTATCCTCAAAGATTTATACAAAC-----------CGTCTTGGAGAAGTAATCGATGATTACCTCTACTAATGGACAGTAAAGTCACTCTCACTTTGATTTGTTGAATAACATATAAATTATAGTGACAGAATTGATCC-------------------AAAAAA--------TAAAAAA---CA-----------------GGAAATTGTTTCGTGGGCTCTCGTCTCATCTGGAAAGATTTACA--AGGGAACCAAAAA-TCAATACAAAGGAAAAATGAAAGG--TTTTATAGATAAGCGT--ACCATCTTCATCA--------AG----GCAAGATTTTTTTCTACATTAGGGTTCGGGATAAATTCTA-CTC-CTCACTG-TCTTCTAAAGCACTGGGGCCGTTGCTAGGCACACATACCTCA-CTGTGCAGTTGTGCTGAATGA------------------GCCCTGGAGATGTGCTCAGTGAGGGTTGATGGTAACTGCGA--A--G----TTACTTGCTGGCTTATCCCCCTGGGGGCTGAGAGCTTTTAGATT-GCTTTTCTGAAAGATCACAGAGCAAAAAT--AAATTTTAAAAACCC---------------------CACATTTCTAGCAATAAGGAAGCTCAAGAGAATTAAATGAGTAAGTACTTGATGTAAAGGGAGAAAGCAGATTTTCTC------AAAAACAATGACCCCAGTTACATACGAAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 950279 762 - 2200435 TAGAGCCATTCCCATT--GGCCTGTTAGTGAGCATTCATGAT----TGAAAGACTAG-TCTGTTTCTCTCATATCTGAAAATGGAA---ACCTTTCCTTCCTGAC-----TTTTTTTCTATTGAATA--------------------------------------------------------------------------------------------TCTCAATTTCACTGGTATCTGGTTAATCCAAGTTTTGTAGCTTTATCCTCAAAGATTTATATAAAC-----------CGTCTTGGAGAAGTAATCCACGATTACCTCTACTAATGGGCAGTAAAGTCACTCTCACTTTGATTTGTTGAATAACATATAAATTATAGTGACAGAATTGATCC--AA---------------AAAAAA--------AAAAAAA---CA-----------------GGAAATTGTTTCGTGGGCTCTCGTCTCATCTGGAAAGATTTACA--AGGGAACCAAAAA-TCAATACAAAGGAAAAATGAAAGG--TTTTATAGACAAGCGT--ACCATCTTCATCA--------AG----GCAAGATTTTTTTCTACATTAGGGTTCGGGATAAATTCTA-CTC-CTCACTG-TCTCCTAAAGCCCTGGGGCCGTTGCTAGGCACACATGCCTCA-CTGTGCAGTTGTGCTGAATGA------------------GCCCTGGAGATGTGCTCAGTGAGGGTTGATGGTAACTGCGA--A--G----TTACTTGCTGGCTTATCCCCCTGGGGGCTGAGAGCTTTTAGATT-GCTTTTCTGAAAGACCACGGAGCAAAAAT--AAATTTTAAAAACCC---------------------CACATTTCTAGCAATAAGGAAGCTCAAGAGAATTAAATGAGTGAGTACTTGATGTAGAGGGAGAAAGCAGATTTTCTC------AAAAACAATGACCCCAGTTACATATGAAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1386029 753 - 13651311 TAGAGCCATTCCCGTT--GGCCTGTTAGTGAGCATTCATGAT----TGAAAGACTAG-TTTGTTTCTCTCTTATCTGAAAATGGAA---TGCATTCCTTCCTGGCTTTT-TTTTTTTCTATTGAATA--------------------------------------------------------------------------------------------TCTC-------CTGGTATCTGGTTAATCCAAGTTTTGTAGCATTACCCTCAAAGATTTATGTAAAC-----------CGTCTTGGAGAAGTAATCGATGATTACCTCTACTAATGGACAGTAAAGTCACTCTCACTTTGATTTGTTGAATAACATATAAATTATAGTGACAGAATTGATCC-----------------------AA--------AAAAAAA---CA-----------------GGAAATAGTTTTGTGGGCTCTCGTCTCATCTGGAAAGATTTACA--AGGGGACCAAAAA-TCAATACAGAGGAAAAATGAAAGG--TTTTATAGATAAGCGT--ACCATCTTCATCA--------AG----GCAAGATTTTTTTCTACACTAGGGTTCGGGATAAATTCTA-CTC-CTCACTG-TCTTCTAAAGCACTGGGGCCGTTACTAAGCACACACGCCTCA-CTGTGCAATTGTGATGAATGA------------------GCCCTGGAGATGTGCTCAGTGAGGGTTGATGGTAACTGCGA--A--G----TTACTTGCTGGCTTATCCCCCTGGGGGCTGAGAGCTTTTAGACT-GCTTTTCTGAAAGATCACAGAGCAAAAAT--AAATTTTAAAAACCC---------------------CACATTTCCAGCAATAAGGAAGCTCAAGAGAATTAAATGAGTGAGTACTTGATGTAAAGGGAGAAAGCAGATTTTCTC------AAAAACAATGACCCCAGTTACATATGAAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1381319 726 - 108792865 CA-------------------TTGCTAGTGAGCATTCATGAC----TGAAAGACTTG-TTTGTTTCTCTCATATCTGAAAATGTAA---TGCATTCCTTCCTGGC---G-CTGTTCTCTATTGAATA---------------------------------------------------------------------------------------------CTCAATTTCACTGGTATCTGGTTA----------------------ATCAAAGATTTATGTAAAG-----------CATCTTGGAGAAGTCATCGATGATCACCTTTACTAATGGACAACGAAGCCACGCTCACTTTCGTTTGTTGAATAACATATAAATTATAGTGACAGAACTGACCA---AAAAA-----------AAACAA--------ACAAAAAAACCA-----------------GGAAATAGCTTGCTGGGCTCTCATCTCATCTGGAAAGATTCACA--AGGGAACCAAAAA-TCAATACAAAGGAAAAATGAAAGG--GTTG-TAGATAAGTGC--ACCATCTTCGTCA--------AG----ACAAGG--TTTTCCTACGTTGGGGTACAGGATAAATTCTA-CTG-CTTGCTG-TCTTCTAAAGCACTGGGGCCGTTACTAGGCACATGTGCCTG--CTGTGCAATCGCGATGAATGA------------------GCCCGGGAGACGTGCCCAGTGAGAGGTGATGGTAACTGCAA--A--G----TTATTTGCTGGTTTACGCCCCTGGGGGCTGAGAGCTCTTAGATT-GCTTTTCTGAAAGATCACAGAGCAAAATA--AAATTTTTAAAACCC---------------------CATGTTTCTAGCAATAAGGAAGCTCAAGGGAGTTAAATGAGTGAGCACTTGATGTAAAGGGAGAAAGCAGATTTTTTTC-----AAAAACGGTGACCCCAGTTACATAAGAAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1226686 842 - 7082604 CAGAGCCATTCGCATT--GCCTTGCTAGTGAGCATTCATGAC----TGAAAGACTAG-TTTGTTTCTGTCATGTCTGAAAATGTAA---TGCATTCCTTCCTGGC---A-TTTTTTTCTATTGAATAGAAAAATTGAAATTTCtatctatgcaacaatcttgcacgttcatcacatgtaccccaaaacctaaaatgcaattaaaaaaaaaaaaGAAATTTCTCAGTTTCACTGGTATTTGGTTAATCAAAGTTTTGTGGCATTATCATCAAAGATTTATATAAAA-----------CATCTTGGAGAAGTAATCGATGATCACCTCTACTAACAGACAACAAAGCCACTCTCACTTTCATTTGTTGAATAACATATAAATTACAGTGACAGAACTGACCA---GACAGGC---------AAACAA--------ACAAAAA---CA-----------------GGAAATTGTTTTCTGGGTTCTCATCTCATCCGGGAAGATTTACA--AAGGAACCAAAAA-TCAATACAATGGAGAAATGAAAGG--TTTGCTAGATAAGTGC--ACCATCTTCATCA--------AG----ACAAGG--TTTTTCTACCTTGGGGTACGGGAGAAATTCTA-CTC-TTTGCTC-TCTTCTAAAGCACTGGAGCCGTTACTAGGCACATGTGCCTGA-CTGTGCAATTGTGATGAATGA------------------GCCCAGGAGACGTGCTCAGTGAGACATGATGGTAGCTGCAA--A--G----TTATTTGCTGGCTTATGCCCCTGGGGGCTGAGAGCTCTAAGCCT-GCTGTTCTGAAAGATCACAGAGCAAAATA--AACATTTAGAAACCC---------------------CACGTTTCTAGCAATAAGGAAGCTCAAGGGAACTAAATGAGTGAGCACTTGATGTAAAGGCAG----------------------AAAACGGTGACCCCAGTTACATATGAAT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1315278 749 + 1864846 CAGAGCCCTTCGCATT--GCATTGCTAGTGAGCATTCATGAC----TGAAAGACTAG-CTTGTTTCTCTCATATCTGCAAATGTAA---TGCATTCCTTCCTGGC---A-TTTTTTTCTGTTGAATA--------------------------------------------------------------------------------------------TCTCAATGTCACTGGTATCTGGTTAATCAAAGTTTTGTGGCATTGTCATCAAAGATTTACATAAAG-----------CATCTCGGAGAAGTAATCGATGATCACCTCTGTTAATGGACAACAAAGCCACTCTCACTTTCAT---TTGAATAACGTATAAATTACAGTGACAGAGCTGACCA---AAC-------------AAACAA--------ACAAAA----CA-----------------GGAAATTTTTTTCTGGGCTCTCATCTCATCTGGAAAGATTTACA--AGGGAACCAAAAA-TCAATACAAAGGAGAAATGAAAGA--TTTGATAGATAGGTGC--ACCATCTTCATCA--------AG----ACAAGG--TTTTTCTACCTTGGGGTATGGGATAAATTCTA-CTC-TTTGCTC-TCTTCTAAAGCACTGGGGCCATTACTAGGCACATGTGCCTGA-CTGTGCAATTGTGATGAGTGA------------------GCTCGGGAGACGTGCTCAGTGAGGGATGATGGTA-----------------------GCTGGCTTATGCCCCTGGGGACTGAGAGCTCTTAGATT-GCTTTTCTGAAAGATCACAGAGCAAAATA--AAAATTAAAAAACCC---------------------CATGTTTCTAGCAATAAGGAAGCTCAAGGGAATTAAATGAGTGAGCACTTGATGTAAAGGGAGAAAGCAGATTTTTTTTTAAAAAAAAACAGTGACCCCAGTTACATATGAAT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 107718 769 + 287728 CAGAGCCGTTTGCACT--GTGTTGCTCGTGAGCATCCATGAC----TGAAAGACTGG-TTTG----TCTCATGTCTGGAAATGTAA---TGCATTCCTTCCTGGC---ATTTTTTTTCTACTGAATA--------------------------------------------------------------------------------------------TCTCATTTTCACTGGTATCTGGTTAGTCAAAGTTCTGTGGCATTATCATCATAGGTTTATATGAAG-----------CATCTTGGAGAAGTAACGGATGATCACCTCTGCTAATGGACAGCAAAGCCACTCTCACTTTCATTCGCTGAATAGCATATAAATTATAGTGACGTAGCTGACca---aagaaac-----aaagaaacag--------acaaacaaacCA-----------------GGAAATTGTTTTCTGGGCTCTCATCTCATCTGGAAAGATTTACG--AGGGAACCAAAAA-TCAATACAAAGGAGAAGTGAAAGG--TGTGATAGTTAAGTGC--AGCACCTTCATCA--------AG----ACAAGG--TTTCTCCACATT-GGGCACGGGATAAATTCTA-CTC-TTTGCTG-TCTTCTAAAGCACTGCGGCCATTACTGGGCACATGTGCCTGA-CTGTGCAATTGTGATGAATGA------------------GCCCGGGAGACGTGCTC-GTGAGAGATGATGGTAGCTGCAA--A--G----TTATTTGCTGGCTTATGCCCCTGGGGGCTGAGAGCTCTTAGATT-GCTTTTCTGAAAGATCACAGAGCAAAATA--AAATTTTAAAATCCC---------------------CATGTTTCTAGCAATAAGGAAGCTCAAGGGGATTAAATGAGTGAGCACTTGATGTAAAGGGAGAAAGCAGATTTTTTTC-----GAAAACGGTGACCCCAGTTACATATGAAT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 937660 745 + 5252280 -TGGGTCACTCATCTG--AGCTGCTGAGTGAGCACTCGTTACTCAGTAAGAGGCTGGTTTTGTTTCTGCCCTGCCTGCAAATGGGA---TATATTCCTGCCTGGT---G----TTTCCTATTGAATA--------------------------------------------------------------------------------------------TCTCAATTTCACTGGTATGCGGTTAATCAAGGTTTTAAGGCATTATCTTCAAAGATGTGCATAAAC-----------CACCTTGGAGAAGCAACCGATGATTACTTCTACTAAGGGGCA--AAAACTGCCCTCCCTTTGATTTGTTGAATAACCTATAAGC--AAGTAACAGAATTGTCaa---ataaataaataaaataaaacaa--------aataaaa---taaaatacaataaaaGGAGGGAGACTGTTTTCTGGAGCC----CTAATCTAGAAAGA-----------GAACCAGAAGTTCAATAC-------ACACAAACTG--GTTGGATGATGAG-------CACTGGCAGCA----GACTAG----ACAAAGGGGCTTTGT------GGGGGTGGAGTGAACACCAGGTG-TGCTCTC-TCTTCTGAAGGAC-GGGGCCTCTGCT-GGCACACG-GCCACA-CTGCGCCCTGGTGCTGAGCTA------------------CC-----AGGTGT---CTGTGAGAGA-GGTGGTAACTCCCA--GCCA----CAGCTCGCTAGCTGTCTGTCTTGG-------GAGCACTCAGATT-GCTTTTTTGAAGGATCACAAAACAAAAAC--AAGTTTTGAAAA-CT---------------------CACATTCCTAGCAATAAGGAAGCTTGAGGGAATTAAATTAGAAAGCAGTTGATTTAAAGGGAGAAGGC-GACTTTCTC------AAAAG-GATGACTTAGGTGACACCTG-GT i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90010926 692 - 120129022 TCGGGTTGCTCGGTAA--GGACAGGTGTGGAGAACTCACGGC----TGAGATGCTTGCTCCATTTTTCTTCTATCTGAAAATAGGA---TGCATTCCTT-TTGGT---T-GTGTTTTCCAGTGAGAA--------------------------------------------------------------------------------------------TCTCAATTTCATTAGTGTAC-ATTCATCACTGTTTTATAGGGT----------------------------------CATCTTTGAG--------------------------------------TTTCTTTAACCTTGATTTGTTGAATAGCATAAA-----CAGTGACAGAACTGGGAA-------------------GAAAAACAGTAAATATAAACA---AA-----------------AGAGACTGCATTCAGAGGTG----CTAACCTAG---------------------AGAAA-TCAATGGGAAGAAAAAAATAAAGGCTTTTTATAGCCGAAGGA--ATGAATGCTATAAGCAAGCTCAA----CCAAGGTGGGTTCCTAC----GGG---AAGATACACATCC-CGC-CTTAGTGCTCTCCT---------GGGTAATTGTGAGATGGGAATGTCT----TGTACCGATATAACAGGTTG------------------GTCCCGGTGATGGGTCTTGTGAGATGGGA-AATAACTTTGAGGA--G----TAGCCTGCTGGCTTGTCTTCTTAGAGCCAAATGGGTGTTAGGTT-GCTTTGCAGAATCATCATGAAGCAATAAG--GTAAACAATCACCCCCATACCCGCACACATCCCACACACACTCCTAGCAGTGAAGATGCTTAAGGGGACTGAATGAAGAGGCATTTGACTAAGAGGGAGATGGCAGGTTTTCTC-------AGAACAGTGACTGAGGCTGTACAGGAAG i mm10.chr12 I 2 C 0 s dasNov3.JH576208 1718958 757 + 4416731 TAGAGTCATTCCCATTTAGATTGTTTAGTGAACATTAATTAT----TAAAAGGCTGTTTTTGTTTCTCTTGAATATAATAATGAAA---TGCATTTCTTCC-AAT-----TTTTTTTCTAGTGAATA--------------------------------------------------------------------------------------------TTTCTATTTCATTGGTATCTGGTTAATTAAAGTTTTAAGGCATCATCTTTGAAGATTTATATAAAC-----------CATCTTGGGGA--------ATGATTACTTCTACTAGTACACAACAAAATAGCCCTTGCTTTGATTTGTTGAATGACAAAGAAAT---AGTGAGAGAATTGG----------------------GGAAAA--------AGTAAAA---GA-----------------GGTGGT--TTTTCTGAGGC----TCTAATCTGGAAAGATTTACAATAGGGAACTCAAAA-TCAATAAGGAGGAAACATTAAAGA--CTTTGTGGATGGACTTTGAATACTATTACAA--------AGTTAACCAGGAAGTTTTTTT------GG----AGAATAAATACTA-CTTATTCACCA-TTCTCTGAAAAGTTGGAGCCATTGCTAGATACATATACCTCAGCAGTGCAATTGTTATGAATGAAAGCCGAGTCATCTGTTCACACTGGAGATGTGCCAATGGAGAATAAGTGATAACTTAAG--A--AGACCTGACTTGTTTACTTATCTTTCTGGAGGCTTAGCACTCTTAGAGTGGCTTTTCTGGGAGATCACAAAGCTAAAATGCATATTTTTGAAAACT---------------------CACATCCCTAGCAGTAAAGAAGCCCTAGGGAATTAAATGAGAGTGCAACTGATTTAAAGAGAAAAGGAAGTTTTTCTC------CAAAA----------AGTTTCATGTAAGT i dasNov3.JH576208 C 0 I 975 a score=200791.000000 s hg38.chr2_KI270774v1_alt 119082 17 + 223625 CCCAAATTCAGATGCTG s panTro5.chr2A 1408196 17 + 111504155 CCCAAATTCAGATGCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1356961 17 + 114371477 CCCAAATTCAGATGCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1381493 17 + 1464242 CCCAAATTCAGATGCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1105243 17 + 81552678 CCCAAGTTCAGATGCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1435955 17 + 108979918 CCCAAATTCAGATGCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1408397 17 - 111193037 CCCAAATTCAGATGCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1436526 17 + 3644372 CCCAAATTCAGATGCTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1390940 17 - 10304083 CCCAAATTCAGATGCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1463288 17 - 107702431 CCCAAATTCAGATGCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 951041 17 - 2200435 CCCAAATTCAGATGCTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1386782 17 - 13651311 CCCAAATTCAGATGCTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1382045 16 - 108792865 CCCAAACTCA-ATGCTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1227528 17 - 7082604 CCGAAATTCAGATGCTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1316027 17 + 1864846 CCAAAATTCAGGTGCTG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 108487 17 + 287728 CCCAAATTCAGATGCTG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 938405 17 + 5252280 CCTAGTCTGAGATGCTG i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90011618 17 - 120129022 CCCTGACTTAGATGTTG i mm10.chr12 C 0 I 416 e dasNov3.JH576208 1719715 975 + 4416731 I a score=545216.000000 s hg38.chr2_KI270774v1_alt 119099 55 + 223625 GAGTCACTTTTGAGA--CTGCAATAGAATATTTGTTAGGTGGATTTGTGGTTACAAG s panTro5.chr2A 1408213 55 + 111504155 GAGTCACTTTTGAGA--CTGCAATAGAATACTCGTTAGGTGGATTTGTGGTTACAAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1356978 55 + 114371477 GAGTCACTTTTGAGA--CTGCAATAGAATACTCGTTAGGTGGATTTGTGGTTACAAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1381510 55 + 1464242 GAGCCACTTTTGAGA--CTGCAATAGAATATTTATTAGGTGGATTTGTGGTTACAAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1105260 55 + 81552678 GAGCCACTTTTGAGA--CTGCAATAGAATATTTATTAGGTGGATTTGTGGTTACAAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1435972 55 + 108979918 GAGCCACTTTTGAGA--CTGCCATAGAATATTTATTGGGTGGATTTGTGGTTACAAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1408414 55 - 111193037 GAGCCACTTTTGAGA--CTGCCATAGAATATTTATTGGGTGGATTTGTGGTTACAAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1436543 55 + 3644372 GAGCCACTTTTGAGA--CTGCCATAGAATATTTATTGGGTGGATTTGTGGTTACAAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1390957 55 - 10304083 GAGCCACTTTTGAGA--CTGCCGTAGAATATTTATTGGGTGGATATGTGGTTACAAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1463305 55 - 107702431 GAGCCACTTTTGAGA--CTGCCGTAGAATATTTATTGGGTGGATTTGTGGTTACAAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 951058 57 - 2200435 GAGCCACTTTTGAGACTCTGCCGTAGAATATTTATTGGGTGGATTTGTGGTTACAAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1386799 55 - 13651311 GAGCCACTTTTGAGA--CTGCCGTAGAGTATTTATTGGGTGGATTTGTGGTTACAAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1382061 55 - 108792865 GAGCCATGTTTGAGA--CTGCAGTAGAGTATTTGTTAGGTGGATTTGTGATTCCAGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1227545 55 - 7082604 GAGCCATTTTTGAGA--CTGCAGTAGAATATTTGTTAGGTGGATTTGTGATTCCAAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1316044 55 + 1864846 GAGCCGTTTTTGAGA--CTGCAGTAGAATATTTGCTAGGTGGATTTGTGATTCCAAG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 108504 55 + 287728 GAGCCATTTTTGAGA--CTGCAGTAGAGTATTTGTTAGGTGGATTTGTGATTCCAAG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 938422 50 + 5252280 --GCCCCTTGTAAGG--CTATAATGGAGCCT---ATGGGTAGATCTATGATCAGGAA i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90011635 416 - 120129022 I e dasNov3.JH576208 1719715 975 + 4416731 I a score=54236.000000 s hg38.chr2_KI270774v1_alt 119154 5 + 223625 CACAG s panTro5.chr2A 1408268 5 + 111504155 CACAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1357033 5 + 114371477 CACAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1381565 5 + 1464242 CACAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1105315 5 + 81552678 CAGAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1436027 5 + 108979918 CACAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1408469 5 - 111193037 CACAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1436598 5 + 3644372 CACAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1391012 5 - 10304083 CACAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1463360 5 - 107702431 CACAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 951115 5 - 2200435 CACAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1386854 5 - 13651311 CACAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1382116 5 - 108792865 CGCAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1227600 5 - 7082604 CACAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1316099 5 + 1864846 CACAG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 108559 5 + 287728 CGCAG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 938472 5 + 5252280 CCGAG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1720690 5 + 4416731 CAGAG i dasNov3.JH576208 I 975 C 0 e mm10.chr12 90011635 416 - 120129022 I a score=2082063.000000 s hg38.chr2_KI270774v1_alt 119159 161 + 223625 AATTCATGGTTTCCTATT--TTTCACAGATGCTTTATCAGAAGATCTGCTGAGCATCATTGCAAACATGTCTGGATGTCTCCCTTACATGCTGCCCCCAAAATGCCCAAACACTTGCCTGGCGAACAAATACAGGCCCATCACAGGAGCTTGCAACAACAGGT s panTro5.chr2A 1408273 161 + 111504155 AATTCATGGTTTCCTATT--TTTCACAGATGCTTTATCAGAAGATCTGCTGAGCATCATTGCAAACATGTCCGGATGTCTCCCTTACATGCTGCCCCCAAAATGCCCAAACACTTGCCTGGCGAACAAATACAGGCCCATCACAGGAGCTTGCAACAACAGGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1357038 161 + 114371477 AATTCATGGTTTCCTATT--TTTCACAGATGCTTTATCAGAAGATCTGCTGAGCATCATTGCAAACATGTCCGGATGTCTCCCTTACATGCTGCCCCCAAAATGCCCAAACACTTGCCTGGCGAACAAATACAGGCCCATCACAGGAGCTTGCAACAACAGGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1381570 160 + 1464242 AATTCATGGTTTCCTATT--TTTCACAGATGCTTTATCAGAAGATCTGCTGAGCATCATTGC-AACATGTCCGGATGTCTCCCTTACATGCTGCCCCCCAAATGCCCAAACACTTGCCTGGCGAACAAATACAGGCCCATCACAGGAGCTTGCAACAACAGGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1105320 161 + 81552678 AATTCATGGTTTCCTATT--TTTCACAGATGCTTTATCAGAAGATCTGCTAAGCATCATTGCAAACATGTCTGGATGTCTCCCTTACATGCTGCCCCCAAAATGCCCAAACACTTGCCTGGCGAACAAATACAGGCTCATCACAGGAGCTTGCAGCAACAGGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1436032 161 + 108979918 AATTCACGGTTTCCCATT--TTTCACAGATGCTTTATCAGAAGATCTGCTGAGCATCATTGCAAACATGTCCGGGTGTCTCCCTTACATGCTGCCCCCAAAATGCCCAAACACGTGCCTGGCGAACAAATACAGACTCATCACAGGAGCTTGCAACAACAGGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1408474 161 - 111193037 AATTCACGGTTTCCCATT--TTTCACAGATGCTTTATCAGAAGATCTGCTGAGCATCATTGCAAACATGTCCGGGTGTCTCCCTTACATGCTGCCCCCAAAATGCCCAAACACGTGCCTGGCGAACAAATACAGACTCATCACAGGAGCTTGCAACAACAGGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1436603 161 + 3644372 AATTCACGGTTTCCCATT--TTTCACAGATGCTTTATCAGAAGATCTGCTGAGCATCATTGCAAACATGTCCGGGTGTCTCCCTTACATGCTGCCCCCAAAATGCCCAAACACGTGCCTGGCAAACAAATACAGACTCATCACAGGAGCTTGCAACAACAGGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1391017 161 - 10304083 AATTCACGGTTTCCCATT--TTTCACAGATGCTTTATCAGAAGATCTGCTGAGCATCATTGCAAACATGTCCGGATGTCTCCCTTACATGCTGCCCCCAAAATGCCCAAACACGTGCCTGGCGAACAAATACAGGCTCATCACAGGAGCTTGCAACAACAGGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1463365 161 - 107702431 AATTCACGATTTCCCATT--TTTCACAGATGCTTTATCAGAAGATCTGCTGAGCATCATTGCAAACATGTCCGGATGTCTCCCTTACATGCTGCCCCCAAAATGCCCAAACACATGCCTGGCGAACAAATACAGGCTCATCACAGGAGCTTGCAACAACAGGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 951120 161 - 2200435 AATTCACGGTTTCCCATT--TTTCACAGATGCTTTATCAGAAGATCTGCTGAGCATCATTGCAAACATGTCCGGGTGTCTCCCTTACATGCTGCCCCCAAAATGCCCAAACACGTGCCTGGCGAACAAATACAGGCTCATCACAGGAGCTTGCAACAACAGGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1386859 161 - 13651311 AATTCACGGTTTCCCATT--TTTCACAGATGCTTTATCAGAAGATCTGCTAAGCATCATTGCAAACATGTCTGGATGTCTCCCTTACATGCTGCCCCCAAAATGCCCAAACACGTGCCTGGCGAACAAATACAGGCTCATCACAGGAGCTTGCAACAACAGGT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1382121 161 - 108792865 AATTCATGGTTTCCTGTT--TTTCGCAGATGCTTTGTCAGAAGGTCTGCTGGGCATCGTTGCAAACATGTCTGGATGCCTGCCGTACATGCTGCCGCCAAAATGCCCAAACACTTGCCTGGCCAACAAATACAGACTCATCACAGGAGCGTGCAACAACAGGT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1227605 161 - 7082604 AATTCATGGTTTCTTGTT--TTTCACAGATGCTTTATCGGAAGATCTGCTGAGCATGGTTGCCAACATGTCCGGATGCCTGCCGTACATGCTGCCACCAAAGTGCCCGAACACTTGCCTGGCCAACAAATACAGACTCATCACAGGAGCGTGCAACAACAGGT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1316104 161 + 1864846 ACTTCATGGTTTACTGTT--TTTCACAGATGCTTTATCAGAAGATCTGCTGAGCATTGTCGCAAATGTGTCCGGATGCCTGCCGTACATGCTGCCACCAAAATGCCCAAACACTTGCCTGGCCAACAAATACAGACTCATCACAGGAGCCTGCAACAACAGGT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 108564 161 + 287728 AATTCATGGTTCCCTGTT--TTCCACAGGTGCTTTATCAGAAGATCTGCTGAGCGTCGTTGCAAACATGTCCGGATGCCTGGCCTACATGCTGCCACCAAAATGCCCAAACACCTGCCTGGCCAACAAATACAGACTCATCACGGGAGCGTGCAACAACAGGT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 938477 163 + 5252280 GGCTTGCAGCTTCCTGTTCCTTTCTCAGATTCCATCTCAGAGGACCTGCTCAGTGTAATCTCAAACGTCTCGGGATGCTTGCCCTTCATGACGCCGCCCAGCTGCCCGGACACCTGCCTGGCCCGCAAGTACCGGCTCATCACAGGCGCTTGCAACAACAGGT i otoGar3.GL873658 C 0 I 1645 s mm10.chr12 90012051 161 - 120129022 AATTCTGGTCTGTCTTGT--TTATACAGATGCCTTATCAGCAGACATTCTGGGCACAATTGCCAACCTGTCAGGATGCTTGCCTTTCATGCTGCCACCAAGATGTCCTGACACCTGCCTGGCAAATAAGTACCGGCCCATCACAGGGGCGTGCAACAATAGGT i mm10.chr12 I 416 C 0 s dasNov3.JH576208 1720695 161 + 4416731 CATTTCTGGTTTATTTGT--TTTCTCAGACGTTTTATCAGAAGATCTACTGAACATAATTGCAAATATATCTGGATGTCTGCCATACATGTTACCTCCAAAATGTCCAAATAATTGCCTAGTAAACAAATACAGACTTATCACAGGAGCCTGCAACAACAGGT i dasNov3.JH576208 C 0 C 0 a score=4599959.000000 s hg38.chr2_KI270774v1_alt 119320 538 + 223625 ATTGTTTGTGGATTTTCT--------TAATCTTCTCGTGAAAGTTGGATCTGAACATGACTAGATG-CCATCATGAAGGAA--CTTCTA---CCACCACTGGTGGATCTGTATCCACCCCTGAGCCCCTGGTTCCTGTCCTTGGCCTCCCCGACGTGGCCTCCTGCATGCCTGGT-GGTGCCTCAAGCAGCGT---GCCAAGCAGTACTGTC--ATTCCCAGCCACAACG--TCCCATCCACATAGGTGCTTACAGGTGACTCTTAACTTCCTAACCCC-------------------------------------ACAAATTCCACCGCCCTTCACCTAAGAgctcaagccacgtgcttaggcgccatccttgatttcgctagctccgctaccca-ttgtttccaatgcacccccaag-actgtc-acttttacctccaaaatgagtcc------tctcca-----------------ctccctgtcac----cttagctgaagccaaaataaccatccagctgccatcacgtggtggtcccctcactggttctcctaatttaactcttgctttcc--CCATTCACGCTCCCTGTTATGGCCAACACCATCT----------------------CAGCACCCTCCTTCTC s panTro5.chr2A 1408434 538 + 111504155 ATTGTTTGTGGATTTTCT--------TAATCTTCTCGTGAAAGTTGGATCTGAACATGACTAGATG-CCATCATGAAGGAG--CTTCTA---CCACCACTGGTGAATCTGTACCCACCCCTGAGCCCCTGGTTCCTGTCCTTGGACTCCCCAACGTGGCCTCCTGCACGCCTGGT-GGTGCCTCAAGCAGCGT---GCCAAGCAGTACTGTC--ATTCCCAGCCACAACG--TCCCATCCACATAGGTGCTTACAGGTGACTCTTAACTTCCTAACCCC-------------------------------------ACAAATTCCACCGCCCTTCACCTAAGAGCTCAAGCCACGTGCTTAGGTGCCATCCTTGATTTCGCTAGCTCCGCTACCCA-TTGTTTCCAATGCACCCTCAAG-ACTGTC-ACTTTTACCTCGAAAATGAGTCC------TCTCCA-----------------CTCCCTGTCAC----CTTAGCTGAAGCCAAAATAACCATCCAGCTGCCAACACGTGGTGGTCCCCTCACTGGTTCTCCTAATTTAACTCTTGCTTTCC--CCATTCACGCTCCCTGTTATGGCCAACACCATCT----------------------CAGCACGCTCCTTCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1357199 538 + 114371477 ATTGTTTGTGGATTTTCT--------TAATCTTCTCGTGAAAGTTGGATCTGAACATGACTAGATG-CCATCATGAAGGAG--CTTCTA---CCACCACTGGTGAATCTGTACCCACCCCTGAGCCCCTGGTTCCTGTCCTTGGACTCCCCAACGTGGCCTCCTGCACGCCTGGT-GGTGCCTCAAGCAGCGT---GCCAAGCAGTACTGTC--ATTCCCAGCCACAACG--TCCCATCCACATAGGTGCTTACAGGTGACTCTTAACTTCCTAACCCC-------------------------------------ACAAATTCCACCGCCCTTCACCTAAGAGCTCAAGCCACGTGCTTAGGTGCCATCCTTGATTTCGCTAGCTCCGCTACCCA-TTGTTTCCAATGCACCCTCAAG-ACTGTC-ACTTTTACCTCGAAAATGAGTCC------TCTCCA-----------------CTCCCTGTCAC----CTTAGCTGAAGCCAAAATAACCATCCAGCTGCCAACACGTGGTGGTCCCCTCACTGGTTCTCCTAATTTAACTCTTGCTTTCC--CCATTCACGCTCCCTGTTATGGCCAACACCATCT----------------------CAGCACGCTCCTTCTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1381730 538 + 1464242 ATTGTTTGTGGATTTTCT--------TAATCTTCTCGTGAAAACTGGATCTGAACATGACTAGATG-CCATCATGAAGGAG--CTTCTA---CCACCACTGGTGGATCTGTATCCACCCCTGAGCCCCTGGTTCCTGTCCTTGGCCTCCCCGACGTGGCCTCCTGCATGCCTGGT-GGTGCCTCAAGCAGCAT---GCCAAACAGCACTGTC--ATTCCCAGCCACAATG--TCCCATCCACATAGGTGCTTACAGGTGACTCTTAATTTCCTAACCCC-------------------------------------ACAAATTCCACCGCCGTTCACCTAAGAGCTCAAGCCACGTGCTTAGGTGCCATCCTTGATTTCGCTAACTCCGCTACCCA-TTGTTTCCAATGCACCCCCAAG-GCTGTC-ACTTTTACCTGCAAAATGAGTCC------TCTCCA-----------------CTCCCTGTCAC----CTTAGCTGAAGCCAAAATAACCATCCAGCTGCCATCACGTGGTGGTCCCCTCACTGGTTCTCCTAATTTAACTCTTGCTTTCC--CCGTTCACACTCCCTGTTATGGCCAACACCATCT----------------------CAGCACCCTCCTTCTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1105481 538 + 81552678 ATTGTCTGTGGATTTTCT--------TAATCTTCTCCTGAAAGCTGGATCTGAACATGACTAGATG-CCGTCATGAAGGAG--CCTCTA---CCACCACTGGTGGATCTGTGCCCATACCTGAGCCCCTGGTTCCTGTCTCTGGCCTCCCCAACGTGGCCTCCTGCACGCCTGGT-GGTGCCTCAAGCAGCGT---GCCAAGCAGCATTGTC--ATTCCCAGCCACAACA--TCCCATCCACATGGGTGCTTACAGGTGACTCTTAACCTCCTGACCCC-------------------------------------ACAaattccaccgccgttcacctaatagctcaagccacgtgcttaggcgccatctttgatttcgctaactccgctaccca-ttgtttccaatgcacccccaag-actgtc-acttttacctccaaaatgagtcc------tctcca-----------------ctccctgtcac----cttagctgaagccaaaataaccgtccagctgccatcacgcggtggtcccctcactggttctcctaatttaactcttgctttcc--cggttcatgctccctgttgtggccaacatcatct----------------------cagcaccctccttctc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1436193 535 + 108979918 ATTGTTTGTGGATTTTCT--------TAATCTTCTCATGAAAGTTGCATCTGAACATGACCAGGTG-CCATCATAAAGGAG--CCTCTA---CCATGACTGGTGGATCCGTACCCACCCCTGAGCTCCTGGTTCCTGTCCTTGGCCTCCCTGACGTGGCCTCTTGTACACCTGGT-GGTGCCTCGAGCAGCGT---GCTGAGCCACACCGTC--ATTCCCAGCCACAACG--CCCCTTCCACA--GGTGCTTCTAGGTCACTCTTAACTTCCTAACCCC-------------------------------------ACAAATTCCACCGCCGTTCACCTAATAACTCAAGCCATACGTTTAGGTGCCATCCTTGATTTCACTAACTCCCCTACCCA-TTGTTTCCAATGCACCCCCAAG-ACTGTC-ACTATTACCCCCAAAGTGAGTGC------TCTCCA-----------------CTCCCTGTCAC----CTTAGCTGAAGCCAAAATAACCAGCCGGCTGCCATCACGTGGTGG-CTCCTCACTGGTTCTCCTAGTTTAACTGTTGCTTTCC--CCATTCACGCTTCCTGTTGTGGCCAACACCATCT----------------------CAGCACCCTCCTTCTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1408635 535 - 111193037 ATTGTTTGTGGATTTTCT--------TAATCTTCTCATGAAAGTTGCATCTGAACATGACCAGGTG-CCATCATAAAGGAG--CCTCTA---CCATGACTGGTGGATCCGTACCCACCCCTGAGCTCCTGGTTCCTGTCCTTGGCCTCCCTGACGTGGCCTCTTGCACACCTGGT-GGTGCCTCGAGCAGCGT---GCTGAGCCAAACCGTC--ATTCCCAGCCACAACG--CCCCTTCCACA--GGTGCTTCTAGGTCACTCTTAACTTCCTAACCCC-------------------------------------ACAAATTCCACCGCCGTTCACCTAATAACTCAAGCCATACGTTTAGGTGCCATCCTTGATTTCACTAACTCCCCTACCCA-TTGTTTCCAATGCACCCCCAAG-ACTGTC-ACTATTACCCCCAAAGTGAGTGC------TCTCCA-----------------CTCCCTGTCAC----CTTAGCTGAAGCCAAAATAACCAGCCGGCTGCCATCACGTGGTGG-CTCCTCACTGGTTCTCCTAGTTTAACTGTTGCTTTCC--CCGTTCACGCTTCCTGTTGTGGCCAACACCATCT----------------------CAGCACCCTCCTTCTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1436764 535 + 3644372 ATTGTTTGTGGATTTTCT--------TAATCTTCTCATGAAAGTTGCATCTGAACATGACTAGGTG-CCATCATAAAGGAG--CCTCTA---CCATGATTGGTGGATCTGTACCCACCCCTGAGCTCCTGGTTCCTGTCCTTGGCCTCCCTGACGTGGCCTCTTGCACACCTGGT-GGTGCCTCGAGCAGCGT---GCTGAGCCACACCATC--ATTCCCAGCCACAACG--CCCCTTCCACA--GGTGCTTCTAGGTCACTCTTAACTTCCTAACCCC-------------------------------------ACAAATTCCACCGCCGTTCACCTAATAACTCAAGCCATACGTTTAGGTGCCATCCTTGATTTCACTAACTCCCCTACCCA-TTGTTTCCAATGCACCCCCAAG-ACTGTC-ACTATTACCCCCAAAGTGAGTGC------TCTCCA-----------------CTCCCTGTCAC----CTTAGCTGAAGCCAAAATAACCAGCCGGCTGCCATCACATGGTGG-CTCCTCACTGGTTCTCCTAGTTTAACTGTTGCTTTCC--CCGTTCACGCTTCCTGTTGTGGCCAACACCATCT----------------------CAGCACCCTCCTTCTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1391178 535 - 10304083 ATTGTTTGTGGATTTTCT--------TAATCTTCTCATGAAAGTTGCATCTGAACATAACTAGGTG-CCATCATAAAGGAG--CCTCTA---CCATGACTGGTGGATCCGTACCCACCCCTGAGCCCCTGGTTTCTGTCCTTGGCCTCCCTGACGTGGCCTCTTGCACACCTGGT-GGTGCCTCGAGCAGCGT---GCTGAGCCACACCGTC--ATTCCCAGCCACAACG--CCCCTTCCATA--GGTGCTTCTAGGTCACTCTTAACTTCCTAACCCC-------------------------------------ACAAATTCCACCGCCGTTCACCTCATAACTCAAGCCATACGTTTAGGTGCCATCCTTGATTTCACTAACTCCCCTACCCA-TTGTTTCCAATGCACCCCCAAG-ACTGTC-ACTATTACCCCCAAAGTGAGTGC------TCTCCA-----------------CTCCCTGTCAC----CTTAGCTGAAGCCAGAATAACCAGCCGGCTGCCATCACGCGGTGG-CCCCTCACCGGTTCTCCTAGTTTAACTGTTGCTTTCC--CCGTTCACGCTTCCTGTTGTGGCCAACACCATCT----------------------CAGCAACCTCCTTCTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1463526 534 - 107702431 ATTGTTTGTGGATTTTCT--------TAATATTCTCATGAAAGTTGCACCTGAACATGACTAGGTG-CCATCATAAAGGAG--CCTCTA---CCATGACTGGTGGATCCGTACCCACCCCTGAGCCCCTGGTTCCTGTCCTTGGCCTCCCTGATGTGGCCTCTTGCACACCTGGT-GGTGCCTCGAGCAGCGT---GCTGAGCCACACCGTC--ATTCCCAGCCACAACG--CCCCTTCCATA--GGTGCTTCTAGGTCACTCTTAACTTCCTAACCCC-------------------------------------ACAAATTCCACCACCGTTCACCTAATAACTCAAGCCATACGTTTAGGTGCCATCCTTGATTTCACTAACTCCTCTACCCA-TTGTTTCCAATGCACCCCCAAG-ACTGTC-ACTTTTACCTCCGAAGTGAGTGC------TCTCCA-----------------CTCCCTGTCAC----CTTAGCTGAAGCCAAAATAACCAGCCGGCTGCCATCACGCGGT-G-CCCCTCACTGGTTCTCCTAGTTTAACTGTTGCTTTCC--CCGTTCACGCTTCCTGTTGTGGCCAACACCATCT----------------------CAGCACCCTCCTTCTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 951281 535 - 2200435 ATTGTTTGTGGATTTTCT--------TAATCTTCTCATGAAAGTTGCATCTGAACATGACTAGGTG-CCATCATAAAGGAG--CCTCTA---CCATGACTGGTGGATCCGTACCCACCCCTGAGCCCCTGGTTCCTGTCCTTGGCCTCCCTGACGTGGCCTCTTGCACACCTGGT-GGTGCCTCGAGCAGCGT---GCTGAGCCACACCGTC--ATTCCCAGCCACAACG--CCCCTTCCATA--GGTGCTTCTAGGTCACTCTTAACTTCCTAACCCC-------------------------------------ACAAATTCCACCGTCGTTCACCTAATAACTCAAGCCATACGTTTAGGTGCCATCCTTGATTTCACTAACTCCCCTACCCA-TTGCTTCCAATGCACCCCCAAG-ACTGTC-ACTATTACCCCCAAAGTGAGTGC------TCTCCA-----------------CTCCCTGTCAC----CTTAGCTGAAGCCAGAATAACCAGCCGGCTGCCATCACGCGGTGG-CCCCTCACCGGTTCTCCTAGTTTAACTGTTGCTTTCT--CCGTTCACGCTTCCTGTTGTGGCCAACACCATCT----------------------CAGCACCCTCCTTCTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1387020 536 - 13651311 ATTGTTTGTGGATTTTCT--------TAATCTTCTCATGAAAGTTGCATCTGAACATGACTAGGTG-CCATCATAAAGGAG--CCTCTA---CCATGACTGGTGGATCTGTACCCACCCCTGAGCCCCTGGTTCCTGTCCTTGGCCTCCCTGACGTGGCCTCTTGCACACCTGGT-GGTGCCTCAAGCAGTAT---GCAGAACCACACCGCC--ATTCCCAGCCACAACG--CCCCTTCCATA--GGTGCTTCTAGGTCACTCTTAACTTCCTAACCCC-------------------------------------ACAAATTCCACCGCCGTTCACCTAATAACTCAAGCCATACGTTTAGGTTCCATTCTTGATTTCACTAACTCCCCTACCCA-TTGTTTCCAATGCACCCCCAAG-ACTGTC-ACTTTTACCTCCAAAGTGAGTGC------TCTCCA-----------------CTCCCTGTCAC----CTTAGCTGAAGCCAAAATAACCAGCCGGCTGCCATCACGCGGTGGCCCCCTCACTGGTTCTCCTAGTTTAACTGTTGCTTTCC--CTGTTCACGCTTCCTGTTGTGGCCAACACCATCT----------------------CAGCACCCTCCTTCTC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1382282 561 - 108792865 ATTGT-----GATGTTCC--------TAACCTTCTCGCGAACGTTGGCTCTGAACATGACTAGATG-CCATCATGCAGGAG--CCTCTC---CGTCCACGGGTGGATCAGCACCCGGCCCTGAGCGCCCGATTCCTGCCCT-CGACTCCCCGCCGCAGCCCCCTGCAGGCCTGGG-GGTGCCTC-AGCAGCGT---GCCGAGCAGCA--GTC--ATT-CCAGCTGCAATG--CCCCATGCACGTAGAGGCTTACAGGGCACTCTTAACTTCCTAAACCCATAAATGCCACCGCCATTCACTTAACTTCCAAAACCTACAAATTCCACCACCTTTCGCCTAATAGCTCAAGCCACATGCTTAAGGGCCATCCTTGATTCCACTAACTCCCCTACCCG-TCGTCTCCAATGCGCCCCCAAG-AC--TC-TCTTTTACCTCCAAAATGAGTCC------TCTCCA-----------------CTCCTTGCCAC----CTTAGCCGAAGCTGAGATAATCCTCCAGCTGCCATCATGCGGCGGTCCCCTCCCTGGCTCTCCTGATGTAA--CTTACTTTCA--TCGTTTGCGCTCCCTGTCGTGGCCCACACCATCT----------------------CAGTGCCCTCCTTCCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1227766 538 - 7082604 ATTGC-----GATTTTCT--------TAACCTTCTCGTGAACGTTGGATCTGAACACGACTAGAT---------------G--CCCCTC---CATCCACGGGTGGATCAGCACCCAGCCCTGAGCGCCCCAATCCTGCCCTGGGACTCCCCACTGCCG-CCCCTGCAGGCCTGGG-GGTACCTC-AGCAGTGT---GCCGAGCAGCA--GCC--ATT-CCAGCCACAATG--CCCCACCCACGTAGAGGCTTACAGGGCACTCTGAACTTCCTACACCCGTAAATGCCACCGCCGTTCACTTAACTTCCTAAACCTACAGGTTCCACCACTGTTCGCCTAATAGCTCAAGCCACATGCTTAGGCGCCATCCTTGATTCCAGTAACTCCGCTACCCG-TTGTCTTCAATGCACCCCCAAG-GCTGTC-CCTTTTACCGCCAAAATGAGTCC------TCTCCA-----------------CTCCTTGCCAC----CTTAGCTGAAGCCGAAATAATCAGCCCGCTGCCATCATGCCATGGTCCCCTCCCTGGTTCTCCTGATTTAACTCTCGCTTTCC--TCCTTCACGCTCCCTGTGGTGGCCCACACCGTCT----------------------CAG------------- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1316265 555 + 1864846 ATTGT-----GATTTTCT--------TAACCTTCCTGTGAACGTTGGCTCTGAACATGACTAGATG-CCATCATGAAGGAG--CCTCTG---CCTCCACGGGTGGATCAGCGCCCAGCCCTGAGCACCCCATTCCTGCCCTGGGACTCCCCGACGCCGCCCGCTGCAGGCCTGGG-GGTGCCTC-ATCAGCGT---GCCGAGCAGCA--GTC--ATT-CCGGCCACAATG---CCCATCCACATAGAGGCTTATAGGGCACTCTGAACTTCCTAAACCCATAAATGCCACCGCCGTTCACTTAACCTCCTAAACCTACAAATTCTACCACCGTTCGCCTAAT----------ACATGCTTAAGCACCATCCTTGATTCCAGTAACTCCCATACCCA-TTGTCTCCAATGCATGTCTAAG-ACTGTC-CCTTTTACCTCCAAAATGAGTCC------TCTCCA-----------------CTCCTTGCCAC----CTAAGGCGAAGCTGAAATAATCAGCCAGCCGCCATCCTGCGGTGGTCCCCTCCCTGGTTCTCCTGATTTAACTCTTGCTTTCC--TCCTTCACGCTTCCTGTCGAGACCCACACCATCG----------------------CAGCACCCTCCTTCTC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 108725 542 + 287728 ACTGT-----GATTTTCT--------TCACCTTCTCGTGAACGTTGGATCTGGACATGACTGGATG-CCATCAGGAAGGAG--CCTCTC---CATCCACGGGTGGGTCAGCACCCAGCCCTGAGCGCCCGACTCGTGCCCTTGGGCTCCCCGACGCCGCCCCCTGCAGGCCTGGG-GGTGCCTC-AGCAGCGT---GCCGAGCGGCA--GTC--ATT-CCAGCCACAATG--CCCCATCCACGTAGAGGCTTATAGGGCGCTCTTAACTTCCTAAACCCATAAATGCCACCGCCGTTCACGTAACTTCCTAAACCTACAAATTCCACCGCCGTTCGCCTAAGAGCTCAAGCCACATGCTTAAGC-CCATCCTTGATTCCACTAACTCCCCTACCCG-TTGTCCCCAGTGCACCCCCAAG-ACTGTC-TCTTTTACCTCCAAAATGAGTCC------TCTGCA-----------------CTCCTGGCCAC----TTTAGCTGAAGGCGAAATAATCAGCCAGCTGCCACCGTGCGGTGGTCCCCTCCCGGGTTCTCCTAATTTAACCCTTG----------------------TGTCATGCCCCACACCATCT----------------------CAG---CGTCCTTCTC i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90012212 455 - 120129022 ACTGTGTGAAGACCCTCTATTCATCATGAGCCTCTCAAGA--------CTTGTTCATAACCACAAG-TCACTGCAAAGTGG--GCTCTAGATTCATGAACTGTGGCCATCCACCTCTCTGTGTGTCCCATTAGCTCACACTCCAGCTCTCTGCCATTGCTACCCTCATGCTGTGC-TATACCCACATAGAGGT---GTCAGAGGAGAACGTT---------------------------------TGCTGTTCTGTCTCACTCTT-ACTTTCTAAATTC-------------------------------------CCAGAATGGATTACAA-TCACCTAGTATCCCAAGCCAGATACTTA----CCATCTTGGATTTCTCCAAATCTCCTAC-----TGCCTCTAGTATGTTACCAAG-ACCACCTGCTTCCTCCCACAAA----------------------------------------------------CCTGACTGAAGG------AACAATTTGAAGGGCATCA----------CCCTTTGTGGC-------ATGTAGCTCTTGCTTCCCT-TTATGTATGTGCCCTCTTA-GACACAAACCATCA----------------------CAATGCCCCTTTCCTC i mm10.chr12 C 0 I 4076 s dasNov3.JH576208 1720856 586 + 4416731 ATTTTTTTC-GGTTTTCT--------TTATCTTCTCATGTAAGTTTTATTTGAACATAATTAGATACCCATCATGAGTGAGATCCTCTA----GATGATTTGTTCATCTTatcactcctctgagctctagccccttaaact--gactatttgacatctc----------cctggtaggcatctcaatcataacttggccaaatcagaacattttattcccaccaataatactccctctccaaataagtgtttaaaaatcatccttgtctttgtaaacac-------------------------------------agaaaatggctccatattcccctaattgcttaaaccaaatacttaaa-gtcatccttgatttctccaaaccccttacccatttatattcaatacctaagtaagtattatt-tattctacctccaaaatatgtcccaaatatcgccacatctctttacatcttccctcctatcaccaatctgagttgaagtcaaaatggccagggtgttggaataaagtgattgtctcttaagtggt-attataatttaaaactcatttttctacatcccatactccatattgtagccaaagtgatattttaaaaacacaaatttgattatggcatgctccttctt i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 938640 1645 + 5252280 I a score=358077.000000 s hg38.chr2_KI270774v1_alt 119858 45 + 223625 AACT-CCTC--CCTCAGT-CCCCACTGCACTCAGAGTGAGTTCAGATCC s panTro5.chr2A 1408972 46 + 111504155 AACTCCCTC--CCTCAGT-CCCCACTGCACTCAGAGTGAGTTCAGACCG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1357737 46 + 114371477 AACTCCCTC--CCTCAGT-CCCCACTGCACTCAGAGTGAGTTCAGACCG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1382268 47 + 1464242 AACTCCCTC--CCTCAGTCCCCCACTGCACTCAGAGTGAGTTCAGACCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1106019 46 + 81552678 aactccctc--cctcagt-ccccactgcactcagagtgaGTTCAGATCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1436728 48 + 108979918 AGTGCCCCCCACCCAAGT-CCCCACTGCACTCAGAGTGAGTTCAGATCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1409170 48 - 111193037 AGTGCCCCCCACCCAAGT-CCCCACTGCACTCAGAGTGAGTTCAGATCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1437299 48 + 3644372 AGTGCCCCCCACCCAAGT-CCCCACTGCACTCAGAGTGAGTTCAGATCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1391713 48 - 10304083 AGTGCCCCCCACCCAAGT-CCCCACTGCACTCAGAGTGAGTTCAGATCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1464060 48 - 107702431 AGTGCCCCCCACTCAAGT-CCCCACTGCACTCAGAGTAAGTTCAGATCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 951816 48 - 2200435 AGTGCCCCCCACCCAAGT-CCCCACTGCACTCAGAGTGAGTTCAGATCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1387556 48 - 13651311 AATGCCCCCAACCCAAGT-CCCCACTGCACTCAGAGTGAGTGCAGATCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1382843 44 - 108792865 TACGCCCTC--CCTCAGT-CCCCACTGCACTCGGAGTGAGCTCAGAT-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1228304 42 - 7082604 --CGTCCTC--CCTGAGC-CCCCACTGCGCTCGGAGGGAGTTCAGAT-- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1316820 44 + 1864846 TACGCCCTC--CCTCAGT-CCCCACTGCACCCGGAGTGAGTTCAGAT-- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 109267 44 + 287728 TACGCCCTC--CCTGGGT-CCCCACTGCACTCAGAGTGAGTTCAGAT-- i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1721442 47 + 4416731 aacacttacc-attgact-tttcattgcacctagaataaatctaaattc i dasNov3.JH576208 C 0 I 2336 e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I a score=9428024.000000 s hg38.chr2_KI270774v1_alt 119903 1057 + 223625 GCCCAACAGTGGCGACCGCCCACCTCCTCTGGTccacaatggcaggagatggacaggagctttggccacacacacaggcatgtgattcagtctggggttcagaatggttttctgaagaaggtgatatgcgagtgagccaaatc--ttaaaggatgagtgggcatttctcaaatggtc-cacagggtagagaagagggctttgcaaaggccggaaagagcaagatgcgtttgggctgaaacgtgcagcctttggcacacagaggggcagagggagagcagccgggatTGTGGCGCCTGTGGGGTCTGGGGGAAACAGTGTGCCCGGTGGTCACCTAGAAGCTTTGTCACAATAGTGTGGCGCCAGGATGGCTGCAGGCTTGATGTTC--------ACCGATGCAGGCAGCAAAGGTGCTTAGCATGGAAGAACTCCTCAAAGGGACTCAAGCTCCTCACTGCTGGGTGTGCTGAGGTCAGAAGGAAGATGCCCCCCC-------------TGAAAGAGGGATCAGCGGGACCCAGGCAGAGCCCTGGCTTGGACAGGCCCTGTCCTGAGACAGAGAGCAGGGGCTTTGTGACAATGAACAGGAATCGGGGTCCTGGgtatatgatgatggttaagaacaacagctttgcaactggacagccctggatttgaaacctggaatcaccacctatcagagggcagtttgtttcaattctttgagcTGTAAGAGCTTGTTTGT-TAAGCCCACAGCAGGAATGCATAACCTGGCCATGTGTGAGGATCTGATCTTAGGACTGCGGAGCCCCGGCTGGAAGAGGCAGCCTGTGCTGAACGCAGAGATGGGTCAGGGCCACACAGGAGGCTGCTGTCCACCCCTCCTGCCCTGAAGCCTGGGGGGGGGTCTGTGCCTTCCCGTGGAAGTGGGCTCAGAGGTGGAGATGGCACGTGTCCTGTCCTCAGAGCTCAGTGGGAGACATAGATGTAGACAAAGGATG---------CAC---AGGAGATGATGCCTGGGAGTATGGGGACACTGAGATGGCTGGTGGGATGCACGGCTGGAGGGACCAGGCCTGGATGGaggagggg s panTro5.chr2A 1409018 1056 + 111504155 GCCCAACAGTGGCGACTGCCCACCTCCTCTGGTccacaatggcaggagatggacaggagcttgggccacacacagaggcatgtgattcagtctggggttcagaatggttttctgaagaaggtgatatgagagtgagccaaatc--ttaaaggatgagtgggcattTCTCAAATGGTC-CACAGGGTAGAGGAGTGGGCTTTGCAAAGGCCGGAAAGAGCAAGACACGTTTGGGCTGAAACACTCAGCCTTTGGCACACAGAGGGGCAGAGGGAGAGCAGCCGGGATTGTGGCGCCTTTGGGGTCTGGGGGAAACAGTGTGCCCGGTGGTCACCTAGAAGCTTTGTCACAATAGTGTGGCGCCAGGATGGCTGCAGGCTTGATGTTC--------ACCGATGCAGGCAGCAAAGGTGCTTAGCATGGAACAACTCCTCAAAGGGACTCGAGCTCCTCACTGCTGGGTGTGCTGAGGTCAGAAGGAAGATGCCCCCCC-------------TGAGAGAGGGATCAGCGGGACCCAGGCAGAGCCCTGGCCTGGACAGGCCCTGTCCTGAGACAGAGAGCAGGGGCTTTGCAACAATGAACAGGAATCAGGGTCCTGGgtatatgatgatggttaagaacaacagctttgcaactggacagccctggatttgaaacctggaatcaccacctatcagAGGGCAGTTTGTTTCAATTCTTTGAGCTGTAAGAGCTTGTTTGT-TAAGCCCACAGCAGGAATGCATAACCTGCCCATGTGTGAGGATCAGATCTTAGGACTGCGGAGCCCCGGCTGGAAGAGGCAGCCTGTGCTGAACGCAGAGATGGGTCAGGGCCACACAGGAGGCTGCTGTCCACCCCCTCTGCCCTGAAGCCT-GGGGGGGCTCTGTGCCTTCCCGTGGAAGTGGGCTCAGAGGTGGAGATGGCACGTGTCCTGTCCTCAGAGCTCAGTGGGAGACATAGATGTAGACAAAGGATG---------CAC---AGGAGATGATGCCTGGGAGTATGGGGACACTGAGATGGCTGGTGGGATGCACGGCTGGAGGGACCAGGCCTGGATGGAGGAGGGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1357783 1056 + 114371477 GCCCAACAGTGGCGACTGCCCACCTCCTCTGGTccacaatggcaggagatggacaggagcttgggccacacacagaggcatgtgattcagtctggggttcagaatggttttctgaagaaggtgatacgagagtgagccaaatc--ttaaaggatgagtgggcatttctcaaatggtc-cacagggtagaggagtgggctttgcaaaggccggaaagagcaagacacgtttgggctgaaacactcagcctttggcacacagaggggcagagggagagcagccgggatTGTGGCGCCTTTGGGGTCTGGGGGAAACAGTGTGCCCGGTGGTCACCTAGAAGCTTTGTCACAATAGTGTGGCGCCAGGATGGCTGCAGGCTTGATGTTC--------ACCGATGCAGGCAGCAAAGGTGCTTAGCATGGAACAACTCCTCAAAGGGACTCGAGCTCCTCACTGCTGGGTGTGCTGAGGTCAGAAGGAAGATGCCCCCCC-------------TGAGAGAGGGATCAGCGGGACCCAGGCAGAGCCCTGGCCTGGACAGGCCCTGTCCTGAGACAGAGAGCAGGGGCTTTGCAACAATGAACAGGAATCAGGGTCCTGGgtatatgatgatggttaagaacaacagctttgcaactggacagccctggatttgaaacctggaatcaccacctatcagagggcagtttgtttcaattctttgagcTGTAAGAGCTTGTTTGT-TAAGCCCACAGCAGGAATGCATAACCTGCCCATGTGTGAGGATCAGATCTTAAGACTGCGGAGCCCCGGCTGGAAGAGGCAGCCTGTGCTGAACGCAGAGATGGGTCAGGGCCACACAGGAGGCTGCTGTCCACCCCCTCTGCCCTGAAGCCT-GGGGGGGCTCTGTGCCTTCCCGTGGAAGTGGGCTCAGAGGTGGAGATGGCACGTGTCCTGTCCTCAGAGCTCAGTGGGAAACATAGATGTAGACAAAGGATG---------CAC---AGGAGATGATGCCTGGGAGTATGGGGACACTGAGATGGCTGGTGGGATGCACGGCTGGAGGGACCAGGCCTGGATGGAGGAGGGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1382315 1053 + 1464242 GCCCAACAGTGGTGACCGCCCACCTCCTCTGGTccacagtggcaggagatggaccggagctttggccacacacagaggcatgtgattcagtctggggttcagaatggttttctgaagaaggtgatatgcgagtgcgccaaatc--ttaaaggatgagtgggcatttctcaaatggtc-cacaggatagaggagtgggctttgcaaaggctggaaagagcaagacgcgtttgggctgaaacactcagcctttggcacacagaggggcagagggagagcagccgggatTGTGGCGCCTGTGGGGTCT-GGGGAAACAGTGTGCCCGGTGGTCACCTAGAAGGTTTGTCACAATAGTGTGGCGCCAGGATGGCTGCAGGCTTGATGTTC--------ACCGATGCAGGCAGCAAAGGTGCTTAGCATGGAAGAGCTCCTCAAAGGGACTCGAGCTCCTCGCTGCT-GGTGTGCTGAGGTCAGAAGGAAGATGCCCCCCC-------------TGAGAGAGGGATCAGCGGGACCCAGGCAGAGCCCTGGCCTGGGCAGGCCCTGTCCTGAGACAGAGAGCAGGGGCTTTGCGACAATGAACAGGAATCGGGGTCCTGGgtatatgatgatggttaagaacaacagctttgcaactggacagccctggatttgaaacctggaatcaccacctatcagagggcagtttgtttcaattctttgagcTGTAAGAGCTTGTTTGT-TAAGCCCACAGCAGGAATGCATAACCTGGCCATGTGTGAGGATCAGATCTTAGGACTGCGGAGCCCCGGCTGGAAGAGGCAGCCTGTGCTGATCGCAGAGATGGGTCAGGACCACACAGGAGGCTGCTGTCCACCCCTCCTGCCCTGAAGCCT--GGGGGGTTCTGTGCCTTCCCGTGGAAGTGGGCTCAGAGGTGGAGATGGCACGTGTCCTGTCCTCAGAGCTCAGTGGGAGACATAGATGTAGACAAAGGATG---------CAC---AGGAGATGATGCCTGGGAGTATGGGGACACTGAGATGGCTGGTGGGATGCATGGCTGGAGGGACCAGGCCCAGATGGaggagggg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1106065 1059 + 81552678 ACCCAGCAGTGGCGACTGCCCACCTCCTGTGGTCCTCaatggcgggagatggacaagag-tttggccacacacagaggcatgtgattcagtctggggttcagaatggttttctgaagaaggtggtacgggagtgagccaaatc--ttaaaggatgagtgggcatttctcaaatggtc-cacagggtagaggagagggctttgcaaagaccagaaagagcaagacgcgtttgggctgaaacaccaagcctttggcacacagaggggcagagggagagcagccgggattgtggcACCTGTGGGGTCT-GGGGAAGCAGTATGCCCGGTGGTCACCTAGAAGCTTTGTCCCAATAGTGTGGCGCCAGGATGGCTACAGGCTTGATGTTCAGATGTTTACCGATGCAGGCAGCACAGGTGCTTAGCATGGAAGCGCTCCTCAGAGGGACTCAAGCTCCTCGCTGCTGGGTGTGCTGAGGTCAGAAAGAAGATGCCCCGCC--------------GAGAGAGGGATCAGCGGGACCCAGGCAGAGCCCTGGCCTGGACAGGCCATGTCCTGAGACAGAGAGCAGGGGCTTTGCGACAATGAACAGGAATCCGGGTCCTGGgtatatgatattggttaagaacaacagctttgcagctggacggccctggatttgaaacctggAATCACCACCCGTCAGAGGGCAGTCTGTTTCAATTCTTTGAGCTGTAAGAGCTTGTTTGT-TAAGCCCACAGCAGGAATGCATAACCCGGCCATGTGTAAGGACCAGATCTTAGGAGTGCGGAGCCCCGGCTGGAAGAGGCAGCCTGTGCTGAATGCGGAGATGGGTCAGGACCACACAGGAGGCTGCTGTCCATCCCTCCTGCCCTGAAGCCT--GGGGGGGTCTGTGCTTTCCCGTGGAAGTGGGCTCAGAGGTGGAGACGGCACGTGTCCTGTCCTCAGAGCTCGGTGGGAGATATAGA-GTAGACAAAGGATG---------CAC---AGGAGATGATGCCTGGGAGTACGGGGACACTGAGGTGGCTGGTGGGATGCATGGCTGGAGGGACCAGGCCAGGATGGAGGAGGGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1436776 1048 + 108979918 GCCCAACAGTGGCAACTGCCCACCTCCTCTGGTccacggtggcaggaggtagacaggagatttggccacacacacagccatgtgattcagtctgcggttcagactggttttctgaagaaggtgatacagaagtgagccaaatc--ttaagggatgagtggggatttctcaaatgggc-cacagggtagaggagagggttttgcaaaggccagaaagagcaagacacgtttgggcagaaacacgcagcctttggcacacagaggggcagagggagagcagctgcgactgTGGCGCCTGTGGGGTCTGGGGGCAATAATACGCCCCGTGGTCACCTGGAGGCTTTGT----------------CAGGATGGCCGCAGGCTTGATGTCC--------ACCGATGCAGGCAGCAAAGGTGCTTAGCATGGAAGAGCTCCTCAAAGGAACTCGAGCTCCTCGCTGCTGGGTGTGCTGAGGCCAGAAGGAAGATGCCCCGTCCCCGCTGACCCCGTGAGAGAGGGATCAGCAGGACCCAGGCAGAGCCCTGGCCTGGACAGGCAGTGTCCTGAGACAGAGGGCAGGGGCTCTGGGACAATGAACAGGAATCGGCGTCCTGGCT---CAatgatggttaagaacaacagctttgcaaatggacagccctggatttgagacctggaatcaccacttatcaAAGGGCAATTTGTTTCCATTCTTTGAGCTGTAAGAGCTTGTTTGT-AAAGCCCACATCAGGAACGCATAACCTGGCTATGTGTAAGGACCGGATCTTAGGACCGTGGAGCCCCAGCTGGAAGAGGCAGCCTGTGCTGAACGCGGAGATGGGTCAGGACCACACAGGAGGCTACTGTCCACCCCTCCTCCCCTGAAGCCT---GGGGTGCCTGTGCTCACGCATGGAAGCAGGATCAGAGGTGGAGACGGCACGTGTCCTGTCCTCAGAGCTCGGTGGAAGACATAGGTGTAGACAAGGGATG---------CGC---AGGAGATGATGCCTGGGAGTATGGGGACACTGAAGTGGCTGGTGGGATGCATAGCTGGAGGGACCGGGCCTGGATGGAGGAGGGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1409218 1048 - 111193037 GCCCAACAGTGGCAACTGCCCACCTCCTCTGGTccacggtggcaggaggtagacagaagctttggccacacacacagccatgtgattcagtctgcggttcagactggttttctgaagaaggtgatacagaagtgagccaaatc--ttaagggatgagtggggatttctcaaatgggc-cacagggtagaggagagggttttgcaaaggccagaaagagcaagacacgtttgggcagaaacacacagcctttggcacacagaggggcagagggagagcagctgcgactgtggcaCCTGTGGGGTCTGGGGGCAATAATACGCCCCGTGGTCACCTGGAGGCTTTGT----------------CAGGATGGCCGCAGGCTTGATGTCC--------ACCGATGCAGGCAGCAAAGGTGCTTAGCATGGAAGAGCTCCTCAAAGGGACTCGAGCTCCTCGCTGCTGGGTGTGCTGAGGCCAGAAGGAAGATGCCCCGTCCCCGCTGACCCCGTGAGAGAGGGATCAGCAGGACCCAGGCAGAGCCCTGGCCTGGACAGGCAGTGTCCTGAGACAGAGGGCAGGGGCTCTGGGACAATGAACAGGAATCGGCGTCCTGGGT---CAATGATGGTTAAGAACAACAGCTTTGCAAATGGACAGCCCTGGATTTGAGACCTGGAATCACCACTTATCAAAGGGCAATTTGTTTCCATTCTTTGAGCTGTAAGAGCTTGTTTGT-AAAGCCCACATCAGGAACGCATAACCTGGCTATGTGTAAGGACCGGATCTTAGGACCGTGGAGCCCCAGCTGGAAGAGGCAGCCTGTGCTGAATGCGGAGATGGGTCAGGACCACACAGGAGGCTACTGTCCACCCCTCCTCCCCTGAAGCCT---GGGGTGCCTGTGCTCACGCATGGAAGCAGGATCAGAGGTGGAGACGGCACGTGTCCTGTCCTCAGAGCTCGGTGGAAGACCTAGGTGTAGACAAGGGATG---------CGC---AGGAGATGATGCCTGGGAGTATGGGGACACTGAAGTGGCTGGTGGGATGCATAGCTGGAGGGACCGGGCCTGGATGGAGGAGGGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1437347 1048 + 3644372 GCCCAACAGTGGCAACTGCCCACCTCCTCTGGTccacggtggcaggaggtagacaggagctttggccacacacacagccatgtgattcagtctgcggttcagactggttttctgaagaaggtgatacagaagtgagccaaatc--ttaagggatgagtggggatttctcaaatgggc-cacagggtagaggagagggttttgcaaaggccagaaagagcaagacacgtttgggcagaaacacgtagcctttggcacacagaggggcagagggagagcagctgcgactgTGGCGCCTGTGGGGTCTGGGGGCAATAATACGCCCCGTGGTCACCTGGAGGCTTTGT----------------CAGGATGGCCGCAGGCTTGATGTCC--------ACCGATGCAGGCAGCAAAGGTGCTTAGCATGGAAGAGCTCCTCAAAGGGACTCGAGCTCCTCGCTGCTGGGTGTGCTGAGGCCAGAAGGAAGATGCCCCGTCCCCGCTGACCCCGTGAGAGAGGGATCAGCAGGACCCAGGCAGAGCCCTGGCCTGGACAGGCAGTGTCCTGAGACAGAGGGCAGGGGCTCTGGGACAATGAACAGGAATCAGCGTCCTGGGT---CAatgatggttaagaacaacagctttgcaaatggacagccctggatttgagacctggaatcaccacttatcaAAGGGCAATTTGTTTCCATTCTTTGAGCTGTAAGAGCTTGTTTGT-AAAGCCCACATCAGGAACGCATAACCTGGCTATGTGTAAGGACCGGATCTTAGGACCGTGGAGCCCCAGCTGGAAGAGGCAGCCTGTGCTGAACGCGGAGATGGGTCAGGACCACACAGGAGGCTACTGTCCACCCCTCCTCCCCTGAAGCCT---GGGGTGCCTGTGCTCACGCATGGAAGCAGGATCAGAGGTGGAGACGGCACGTGTCCTGTCTTCAGAGCTCGGTGGAAGACATAGGTGTAGACAAGGGATG---------CGC---AGGAGATGATGCCTGGGAGTATGGGGACACTGAAGTGGCTGGTGGGATGCATAGCTGGAGGGACCGGGCCTGGATGGAGGAGGGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1391761 1048 - 10304083 GCCCAACAGTGGCAACTGCCCACCTCCTCTGGTccacggtggcaggaggtagacaggagctttggccacacacacagagccatgattcagtctgcggttcagactggttttctgaagaaggtgatacagaagtgagccaaatc--ttaagggatgagtggggatttctcaaatgggc-cacagggtagaggagagggctttgcaaaggccagaaagagcaagacacgtttgggcagaaacacgcagcctttggcacacagaggggcagagggagagcagctacgactgTGGCGCCTGTGGGGTCTGGGGGCAATAACACGCCCCGTGGTCACCTGGAGGCTTTGT----------------CAGGATGGCCGCAGGCTTGATGTCC--------ACCGATGCAGGCAGCAAAGGTGCTTAGCATGGAAGAGCTCCTCAAAGGGACTCGAGCTCCTCGCTGCTGCGTGTGCTGAGGCCAGAAGGAAGATGCCCCGTCCCCGCTGACCCCGTGAGAGAGGGATCAGCAGGACCCAGGCAGAGCCCTGGCCTGGACAGGCAGTGTCCTGAGACAGAGGGCAGGGGCTCTGGGACAATGAACAGGAATCGGCATCCTGGGT---CAatgatggttaagaacaacagctttgcaaatggacagccctggatttgagacctggaatcaccacttatcagAGGGCAATTTGTTTCCATTCTTTGAGCTGTAAGAGCTTGTTTGT-AAAGCCCACAGCAGGAACGCATAACCTGGCTATGTGTAAGGACCGGATCTTAGGACCGTGGAGCCGCAGCTGGAAGACGCAGCCTGTGCTGAACACGGAGGTGGGTCAGGACCACACAGGAGGTTGCTGTCCTCCCCTCCTCCCCTGAAGCCT---GGGGTGCCTGTGTTCACGCATGGAAGCGGGCTCAGAGGTGGAGATGGCACGTGTCCTGTCCTCAGAGCTTGGTGGAAGACATAGGTGTAGACAAAGGAAG---------CGC---AGGAGATGATGCCTGGGAGTATGGGGACACTGAAGAGGCTGGTGGGATGCACAGCTGGAGGGACCGGGCCTGGATGGAGGAGGGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1464108 1047 - 107702431 GCCCAACAGTGGCAACTGCCCACCTGCTCTGGTccacggtggcaggaggtagacaggagctttggccacacacacagccatgtgattcagtctgcggttcagactggttttctgaagaaggtgatacagaagtgagccaaatc--ttaa-ggatgagtggggatttctcaaatgggc-cacagggtagaggagagggctttgcaaaggccagaaagagcaagacacgtttgggcagaaacatgcagcctttggcacacagaggggcagagggagagcagctgcgattgTGGCGCCTGTGGGGTCTGGGGGCAATAATACACCCCGTGGTCACCTGGAGGCTTTGT----------------CAGGATGGCCGCAGGCTTGATGTCC--------ACCGATGCAGGCAGCAAAGGTGCTTAGCATGGAAGAGCTCCTCAAAGGGACTCGAGCTCCTCGCTGCTGGGTGTGCTGAGGTCAGAAGGAAGATGCCCCGTCCCTGCCGACCCTGTGAGAGAGGGATCAGCAGGACCCAGGCAGAGCCCTGGCCTGGACAGGCAGTGTCCTGAGACAGAGGGCAGGGGCTCTGGGACAATGAACAGGAATCAGCGTCCTGGGT---CGatgatggttaagaacaacagctttgcaaatggacagccctggatttgagacctggaatcaccacttatcagAGGGCAATTTGTTTCCATTCTTTGAGCTGTAAGAGCTTGTTTGT-AAAGCCCACAGCAGGAACGCATAACCTGACTATGTGTGAGGACCGGATCTTAGGACCGTGGAGCCCCAGCTGGAAGAGGCAGCCTGTGCTGAATGCGGAGGTGGGTCAGGACCACACAGGAGGCTATTGTCCACCCCTCCTCCCCTGAAGCCT---GGGATGCCTGTGCTCATGCATGGAAGCAGGATCAGAGGTGGAGACGGCACGTGTCCTGTCCTCAGAGCTCGGTGGAAGACATAGGTGTAGACAAACGATG---------TGC---AGGAGATGATGCCTGGGAGTCTGGGGACACTGAAGAGGCTGGTGGGACGCACAGCTGGAGGGACCGGGCCTGGACGGAGGAGGGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 951864 1048 - 2200435 GCCCAACAGTGGCAACTGCCCACCTCCTCTGGTccacggtggcaggaggtagacaggagctttggccacacacagagccatgtgattcagtctgcggttcagactggttttctgaagaaggtgatacagaagtgagccaaatc--ttaagggatgagtggggatttctcaaatgggc-cacagggtagaggagagggctttgcaaaggccagaaagagcaagacacgtttgggcagaaacacgcagcctttggcacacagaggggcagagggagagcagctgcgactgTGGCGCCTGTGGGGTCTGGGGGCAATAACACGCCCCGTGGTCACCTGGAGGCTTTGT----------------CAGGATGGCCGCAGGCTTGATGTCC--------ACCGATGCAGGCAGCAAAGGTGCTTAGCATGGAAGAGCTCCTCAAAGGGACTCGAGCTCCTCGCTGCTGGGTGTGCTGAGGCCAGAAGGAAGATGCCCCGTCCCCGCTGACCCCGTGAGAGAGGGATCAGCAGGACCCAGGCAGAGCCCTGGCCTGGACAGGCAGTGTCCTGAGACAGAGGGCAGGGGCTCTGGGACAATGAACAGGAATCGGCGTCCTGGGT---CAatgatggttaagaacaacagctttgcaaatggacagccctggatttgagacctggaatcaccacttatcagAGGGCAATTTGTTTCCATTCTTTGAGCTGTAAGAGCTTGTTTGT-AAAGCCCACAGCAGGAACGCATAACCTGGCTATGTGTAAGGACTGGATCTTAGGACCGTGGAGCCCCAGCTGGAAGAGGCAGCCTGTGCTGAACGCGGAGGTGGGTCAGGACCACACAGGAGGCTACTGTCCACCCCTCCTCCCCTGAAGCCT---GGGGTGCCTGTGCTCACACATGGAAGCGGGCTCAGAGGTGGAGACAGCACGTGTCCTGTCCTCAGAGCTTGGTGGAAGACATAGGTGTAGACAAAGGAAG---------CGC---AGGAGATGATGCCTGGGAGTATGGGGACACTGAAGAGGCTGGTGGGATGCACAGCTGGAGGGACCGGGCCTGGATGGAGGAGGGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1387604 1048 - 13651311 GCCCAACAGTGGCAACTGCCCACCTCCTCTGGTCCACGGTGGCAggaggtagacaggagctttggccacacacagaggcatgtgattcagtctgcggttcagactggttttctgaagaaagtgatacagaagtgagccaaatc--ttaaaggatgagtggggatttctcaaatgggc-cacagggtagaggagagggctttgcaaaggccagaaggagcaAGACACATTTGAGCAGATACACGCAGCCTTTGGCACACACAGGGGCAGAGGGAGAACAGCTGCAATTGTGGTGCCTGTGGGGTCTGGGGGTAATAATACACCCCGTGGTCACCTGGAGGCTTTGT----------------CAGGATGGCCGCAGGCTTGATGTCC--------ACCAATGCAGGCAGCAAAGGTACTTAGCATGGAAGAGCTCCTCAAAGGGACTCGAGCTCCTCGCTGCTTGGTGTGCTGAGGCCAGAAGGAAGATGCCCCGTCCCTGCCGACCCCGTGAGAGAGGGATCAGCAGGACCCAGGCAGAGCCCTGGCCTGGACAGGCAGTATCCTGAGACAGAGGGCAGGGGCTCTGGGACAATGAACAGGAATCGGCATCCTGGGT---CGatgatggttaagaacaacagctttgcaactggacagccctggatttgagacctggaatcaccacttatcagagggcaatttgtttccattctttgagctgtaagagcttgtctgt-aaaGCCCACAGCAGGAACGCATAACCTGGCTATGTGTAAGGACCGAATCTGAGGACCGTGGAGCCCCAGCTGGAAGAGGCAGCCTGTGCTGAACGCGGAGATGGGTCAGGACCACACCGGAGGCTGCTGTCCACCCCTCCTCCCCTGAAGCCT---GGGGTGCCTGTGCTCACACATGGAAGCAGGCTCAGAGGTGGAGACGGCACATGTCCTGTCCTCAGAGCTCGGTGGAAGACGTAGGTGTCGACAAAGGATG---------CAC---AGGAGATGATGCCTGGGAGTATGGGAACACTGAAGTGGCTGGTGGGATGCACAGCTGGAGGGACCGGGCCTGGATGGAGGAGGGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1382887 1028 - 108792865 ---------------CTGCCCACCTTGCTGGGTCCAAGGTAGCAGCAGGTGAACAGGAGCTCTGGCCACACAAAGAGCTGTGGGATTCAGTCTggggttcagaatggttttctgaaggtggtgatatgggattgaggcaaatc--ttaaaggatgagtggggatttcccaagtggcc-cacagagtaggggagagggctttgcaaaggctggaaagagctggacatgtttgggCTGAAACACACAGCCTTTGGCACACACA-GGGCGGGGGGGCAGCAGCCGGGGTCACGGCGCCCATGGGGTCT-GGGGAAGCAGTGCATCCTGGGATCACCTAGAAGCTTTGTCAGAATCTTGTGGCACCAGGGTGACTGCAGACTTGGCATTC--------ACCGACGCACATAGCAAAGTTGCTTAGCATGGAAGAGCTCCTCGAGGGGACTCCCGCTCCTGGCTGCTGGGTGTGCTGAGGTCAGAAGGAAGACATCCCGCT---------CTCCTGAGAGAGGAATCAGCAGGACCCAGGCAGAGCTCTGGCCTGGACCAGCAGTGTCCTGAGACAGAGTGCAGGGGCTTTGGGACAATGAACGGGAGTCGGAGTCCTGGGTGTTTGatggtggttaagaacagcagctttgtaacgggacggccctggatttgaaaacc-gaattgccacctaGCAGAGGGCAGTTTG-TTCCATTCTCTGAGCAGTAGGAGTTTGAGCGTAAAGACCCAAGGCAGGAACACATAACCTGGCCACACCTAAGGACCAGATCTTAGGACCGTGGAGCCCCAGCTATAAGAG--AGCCTGTGCTGAATGC------------GGACCACACAGGAGCCTGCTGTCCACCCCTCCTGCCCCGAAGCCT---GGGAGGTCTGTGCTTACCCGGGAAAGCGAGCTCAGAGCTGAAGATGGCAGGTCTCCTGTCCGCAGAGCTCAGTGGGAGACACAGGTGTAGACAAAGGATG---------AACAGAAGGAGGTGATGCCTGGGAGTACAGG-ACACTGAGATGGCTGGTGGGATGCACGGCTGGAGAGACCAGGCCCCGGGGGAGGAGGGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1228346 1039 - 7082604 ---------------ACGCCCAGCTCCTTGGGTCCACGGTGACAGCAGGTACACAGGGGCTCTGGCCACCCACACAGGCGTGGGATTCAGTCTGCggttcagaatggttttctgaagagggtgatatgggagtgaggcagatc--ttaaaggatgagtggggatttcccagatggccacacagagtaggggagacggctttgcaaaggcgggaaagagctggacgcgtttgggCTGAAACACACAGCCTTTGGCACACAGAGGGGCGGGGGGACAGCAGCTGGGGTTGTGGCACCTGTGGGGTCT-GGGGAAGCCGTGTACCCCGGGATCACCTAGAAACTTTGTCAGAATCTTGTGGCACCAGGGTGACTGCAGGCTTGGCGTTC--------ACCGACGCACACAGCAAAGTTGCTTAGCATGAAAGAGCTCCTCGAGGGCACTCCCGCTCCTGGCTGCTAGGTGTGCTGAGGTCAGAAGGAAGACATCCC-CT---------CCCCCGAGAGAGGAATCAGCAGGACCCAGGCAGAGCCCTGGCCTGGACCGGCAGTGTCCTGAGACAAAGTGCAGGGGCCTTGGGACAATGAACGGGAATCGGAGTCCTGGG-GTTTGatggtggttaagaacagtggctttgtaactggatggccctggatttgaacactggaatcgccacctgtcagAGGGCACTTTGTTTCCATTCTCTGAGCTGTAGGAGCTTGTGTGT--AGACCCAAGGCAGGAATGCATAACCTGGCCACATGTGAGGACCAGATCTTAGGACCGTGGAGCCCCAGCTGTAAGAGGCAGCCTGGGCTGAACGC------------GTACCACACAGGAGCCTGCTGTCCACCCCTCCTGCCCTGAAGCCT---GGGAGGTCTGTGCTTACCCAGGAAAGTGGGCTCAGAGCTGGAGATGGCATGTCTCCTGTCCTCAGAGCTCAGTGGGAGACACAGGTGTAGACAAAGGATGCTTTGTAGACAAAGCAGGAGGTGATGCCTGGAAGTACAGG-ACACTGAGATGGCTGGAGGGGTGCACGGCTGGAGGGGCCAGGCCCTGGTGGAGGAGGGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1316864 1030 + 1864846 ---------------CCGCCCACCTCCTTGGGTccacagtggcagcaggtagacaggagctctggctacacacagaggcgtgggattcagtctgggattcagaatggttttctgaagatggtgctatgggagtcaggcaaatc--ttaaaggatgagtggggatttcccaaatggcc-cacagagtaggggagacggctttgcaaaggtgggaaagagctggacatgtttgggctgaaacacactgcctttggcacacaga-ggggtgggggagagcagctggggttgtggctCCTGTGGGGCCT-GGGGAAGCAGTGCACCCTGGGATCACCTAGAAGCTTTGTGAGAATCTTGCGGCACCAGGGTGACTGCGGGCTTGGCATTC--------ACCGACGCACACAGCAAAGTTGCTTAGCATGGAGGAGCTCCTCGAGGGGACTCCCGCTCCTGGCTGCTGGGTGTGCTGAGGTCAGAAGGGAGACATCTCCCT---------CCCCTGAGAGAGGAATCAGCAGGACCCGGGCAGAGCTCTGGCCTGGACCGGCAGTGTCCTGAGACAGAGTGCAGGGGCCTTGGTACAATGGACAGGAATCGGAGTCCTGGGTGTTTGatggtggttaagaacagcagctttgtaactggatggccctggatttgaaaactggaatcgccacctgtcagAGGGCAGTTTGTTTCCATTCTCTGAGCTGTAGGAGCTTGTGTGT--AGACCCAAGGCAGGAACGCATAACCTGGCCACATGTAAGGACCAGATCTTAGGACCGTGGAGCCCCAGCTGTAAGAGGCAGCCCATGCTGAACGC------------GGACCACACAGTAGCCTGCTGTCCACCCCTCCTGCCCCGAAGCCT---GGGAGGTCTGCGCTTACCCGGGAAAGTGGGCTCAGAGCTGGAGATGGCACGTCTCCTGTCCTCAGAGCTCAGTGGGAGACACAGGTGTAGACAAAGGATG---------CACAGAAGGAGGTGATGCCTGGGAGTACAGG-ACACTGAGATGTCTGGTGGGATGCATGGCTGGAGAGACCACGTCCCGGTGGAGGAGGGG i cebCap1.NW_016107827v1 C 0 I 105 s aotNan1.NW_018513311v1 109311 1033 + 287728 ---------------CTGCCCACGTCCTTGGGTCCACTGTGGCAGCAGGTAGACAGGAGCTCTGGCCACAAACACAGGCGTGGGATTCAGGCTGGGGTTCAGAATGG-TTTCTGAAGATGGTGATATGGAAGTGAGGCAAATCTTTTAAAGGATGAGTGGGGATTTCCCAAATGGCC-CACGGAGTGGGGGAGACGGCTTTGCAAAGGCGGGAAAGAGCTGGACACGTTTGGGCTGAAACACACAGCCTTTGGCACACACG-GGGCAGGGGGACAGCAGCCGGGGTTGTGGCGCCTGTGGGGTCT-GGGGAAGCAGTGCACCCTGGGGTCACCTAGAAGCTTTGTCAGAATCTTGCGGCACCAGGGTGACTGCAGGTTTGGCGTTC--------ACCGACGCACACAGCAAAGTTGCTTAGCATGGAAGAGCTCCTCGAGGGGACTCCCGCTCCTGGCTGCTAGGTGTGCTGAGGTCAGAAGGAAGACATCCCCCT---------CCCCCGAGACAGGAATCAGCAGGACCCAGGCGGAGCCCTGGCCTGGACCAGCAGTGTCCTGAGACAGAGTGCAGGGGCTTTGGGACAATGAACAGGAATCGGAGTCCTGGGTGTTTGatggtggttaagaacagcggctttgtaactggatggccctggatttgaaaactggaatcgccacctatcagagggcagtttgtttacagtctctgagctgtagGAGCTTGTGTGTAAAGACCCAAGGCAGGAACGCATAACCTGGCCACGTGTAAGGACCAGATCTTAGGACCGTGGAGCCCCAGCTGTAAGAGGCAGCCTGTGCTGAACGC------------GGACCACACAGGAGCCTGCTGTCCACTCCTCCTGCCCCGAAGCCT---GGGAGGTCTGTGCTTACCTGGGAAAGCGGGTTCAGAGCTGGAGATGGCACGTCTTCTGTCCTCAGAGCTCAGTGGGAGACACAGGTGTAGACAAAGGATG---------CACAGAAGGAGGTGATGCCTGGGAGCACAGG-ACGCTGAGATGACTGGTGGGATGCACGGCTGGAGAGACCAGGCCCCAGTGGAGGAGGGG i aotNan1.NW_018513311v1 C 0 I 70 e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=6006.000000 s hg38.chr2_KI270774v1_alt 120960 1 + 223625 a s panTro5.chr2A 1410074 1 + 111504155 A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1358839 1 + 114371477 A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1383368 1 + 1464242 a i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1107124 1 + 81552678 A i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1437824 1 + 108979918 A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1410266 1 - 111193037 A i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1438395 1 + 3644372 A i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1392809 1 - 10304083 A i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1465155 1 - 107702431 A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 952912 1 - 2200435 A i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1388652 1 - 13651311 A i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 110344 70 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1229385 0 - 7082604 C e cebCap1.NW_016107827v1 1317894 105 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1383915 0 - 108792865 C a score=1652999.000000 s hg38.chr2_KI270774v1_alt 120961 211 + 223625 tggggctggagggc-----ctgggtggaggagggcagggggtaggTGCACTGTTGAGTCAGAAGCCGGAGCGGAGATGGCTTGGACTACACGGGGAGGAGCAGGGTCTTCAGAAGGACAGGGTGGGGTCTAACCTGCAGGTACATGTTGAGGGTG-GGGATCCCGGGGGACAGTGGCGTTGGAGATGTGGGGGCGGGGCTGCTCTCTGAATGGGTTT s panTro5.chr2A 1410075 211 + 111504155 TGGGGCTGGAGGGC-----CAGGGTGGAGGAGGGCAGGGGGTAGGTGCACTGTTGAGTCAGAAGCCAGAGCAGAAATGGCTTGGACTACACGGGGAGGAGCAGGGTCTTCAGCAGGGCAGGGTGGGGTCTAACCAGCAGGTACATGTTGAGGGTG-GGGATCCCGGGGGACAGTGGTGTTGGAGATGTGGGGGCAGGGCTGCTCTCTGAATGGGTTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1358840 211 + 114371477 TGGGGCTGGAGGGC-----CAGGGTGGAGGAGGGCAGGGGGTAGGTGCACTGTTGAGTCAGAAGCCAGAGCAGAAATGGCTTGGACTACACGGGGAGGAGCAGGGTCTTCAGCAGGGCAGGGTGGGGTCTAACCAGCAGGTACATGTTGAGGGTG-GGGATCCCGGGGGACAGTGGTGTTGGAGATGTGGGGGCAGGGCTGCTCTCTGAATGGGTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1383369 210 + 1464242 tggggctggagggc-----ctgggtggaggagggcagggggtaggTGCACTGTTGAGTCAGAAGCCAGAGCGGAGATGGCTTGGACTACAC-GGGAGGAGCAGGGTCTTCAGCAGGGCAGAGTGGGGTCTAACCTGCAGGTACATGTTGAGGGTG-GGGATCCCTGGGGACAGTGGTATTGGAGATGTGGGGGTGGGGCTGCTCTCTGAATGGGTTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1107125 211 + 81552678 TGGTGCTGGGGGGC-----CTGGGTGGAGGAGGGGAGGGGGCAGGTGCACTGCTGAGTCAGAGGCCAGAGCGGATATGGCTTGGACTACATGGGGAGGAGCAGGGTCTTCAGCAGGGCAGGGTGGGGTCTAACCTGCAGGTGCATGTTGAGGTTG-GGGATCCCTGGGGACAGTGGTGTTGGAGATGTGGGGGCGGGGCTGCTCTCTGAATGGGTTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1437825 180 + 108979918 TGGGGC------------------------------------AGGTGCACTGTTGAGCCAGAGGCCAGAGCAGAGATGGCTTGGACTACACGGGGAGGAGCAGGGTCTTCAGCAGGGCAGGGTGGGGTCTAACCTGCAGATGCACGTTCAGGGTG-GGGATTCCTGGGGACAGTGGTGTTGGAGATGTGGGGGCGGGGCTGCTCTCTGAATGGATTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1410267 180 - 111193037 TGGGGC------------------------------------AGGTGCACTGTTGAGCCAGAGGCCAGAGCAGAGATGGCTTGGACTACACGGGGAGGAGCAGGGTCTTCAGCAGGGCAGGGTGGGGTCTAACCTGCAGATGCACGTTCAGGGTG-GGGATTCCTGGGGACAGTGGTGTTGGAGATGTGGGGGCGGGGCTGCTCTCTGAATGAATTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1438396 180 + 3644372 TGGGGC------------------------------------AGGTGCACTGTTGAGCCAGAGGCCAGAGCAGAGATGGCTTGGACTACACGGGGAGGAGCAGGGTCTTCAGCAGGGCAGGGTGGGGTCTAACCTGCAGATGCACGTTCAGGGTG-GGGATTCCTGGGGACAGTGGTGTTGGAGATGTGGGGGCGGGGCTGCTCTCTGAATGGATTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1392810 180 - 10304083 TGGGGC------------------------------------AGGTGCACTGTTGAGCCAGAGGCCAGAGCAGAGATGGCTTGGACTGCACGGGGAGGAGCAGGGTCTTCAGCAGGGCAGGGTGCGGTCTTACCTGCAGATGCACATTCAGGGTG-GGGATTCCTGGGGACAGTGGTGTTGGAGATGTGGGGGCGGGGCTGTTCTCTGAATGGATTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1465156 180 - 107702431 TGGGGC------------------------------------AGGTGCACTGTTGAGCCAGAGGCCAGAGCAGAGACGGCTTCGACTACACGGGGAGGAGCAGGGTCTTCAGCAGGGCAGGGTGCGGTCTAACCTGCAGATGCACGTTCGGGGTG-GGGATTCCTGGGGACAGTGGTGTTGGAGATGTGGGGGCAGGGTTGTTCTCTGAATGGATTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 952913 180 - 2200435 TGGGGC------------------------------------AGGTGCACTGTTGAGCCAGAGGCCAGAGCAGAGACGGCTTCGACTGCACGGGGAGGAGCAGGGTCTTCAGCAGGGCAGGGTGCGGTCTAACCTGCAGATGCACGTTCAGGGTG-GGGATTCCTGGGGACAGTGGTGTTGGAGATGTGGGGGCGGGGCTGTTCTCTGAATGGATTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1388653 180 - 13651311 TGGGGC------------------------------------AGGTGCACTGTTTGGCCAGAGGCCAGAGCAGAGATGGCTTGGACTACACGGGGAGGAGCAGGGTCTTCAGCAGGGCAGGGTGGGGTCTAACCTGCAGATGCACGTTCAGGGTG-GGGATTCCTGGGGACAGTGGTGTTGGAGATGTGGGGGCGGGGCTGTTCTCTGAATGGATTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1383915 215 - 108792865 TGGGGCTGGAGGGACTGGGCTGGGTGGAGGAGGGGATGAGGCAGGTGCACTGTTAAGCCAGAGACCAGACTGAAGATGGCTTGGACTACATGGGGAGGAGTAAGGTCTTCGGCAGGGCAGAGCGGGCTCTAATCTGCAGGTGCATG-TGAGGCTGCGGGACCCCTGGGGACGGTGGTGTTGAAGGTATGGGG-TGGGGCTGCTCTCTGAATGGGTTT i calJac3.chr14 C 0 I 26 s saiBol1.JH378218 1229385 210 - 7082604 TGGGGCTGGAGGGC-----CAGGGTGGAGGAGGGGATGAGGCAGGTGCCCTGTTGAGCCAGAGCCCAGAGTGACGATGGCTTAGACTACGAGGGGAGGGGCAAGGTCTTCAGCAGGGCAGAGCTGGCTCTCACCTGCAGGTGCATGTTGAGGCTGGGGAGCTCCTGGGGATGGTGGTGTTGAAGGTTTGGGGTTGGAGCAG--CTCTGAATGAGTTT i saiBol1.JH378218 C 0 I 26 s cebCap1.NW_016107827v1 1317999 209 + 1864846 TGGGGCCGGAGGGG-----CAGGGTGGAGGAGGGGATGAGGTAGGTGCATTGTTGAGCCAGAGGCCAGAGTGACGATGGCTTGGACTACAC-GGGAGGAGCAAGGTCTTCAGCAGAGCAGAGCAGGCTCTAACCTGCAGGTGCATGTTGAGGCTG-GGGACTCCT-GGGATGGTGGTGGTGAAGGTGTGGACGTGGGGCTGCTCTCTGAATGGGTTT i cebCap1.NW_016107827v1 I 105 I 26 s aotNan1.NW_018513311v1 110414 212 + 287728 TGCGGCTGGAGGGC-----CAGGGTGGAGGAGGGGATGAGGCAGGTGCACTGTTGAGCCAGAGGCCAGAGTGAAGATGGCTTGGACTACACGGGGAGGAGCAAGGTCTTCAGCAGGGCAGAGCGGGCTGTAAGCTGCAGGTGCATGTTGAGGCTGGGGGACTCCTGGCGATGGTGGTGTTGAAGGTATGGGGGTGGGGCTGCTCTCTGAATGGGTTT i aotNan1.NW_018513311v1 I 70 I 26 e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=10505.000000 s hg38.chr2_KI270774v1_alt 121172 2 + 223625 CA s panTro5.chr2A 1410286 2 + 111504155 CA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1359051 2 + 114371477 CA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1383579 2 + 1464242 CA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1107336 2 + 81552678 CA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1438005 2 + 108979918 CA i rheMac8.chr13 C 0 I 104 s chlSab2.chr14 1465336 2 - 107702431 Ca i chlSab2.chr14 C 0 I 117 s calJac3.chr14 1384156 2 - 108792865 CA i calJac3.chr14 I 26 C 0 s saiBol1.JH378218 1229621 2 - 7082604 CA i saiBol1.JH378218 I 26 C 0 s cebCap1.NW_016107827v1 1318234 2 + 1864846 CA i cebCap1.NW_016107827v1 I 26 C 0 s aotNan1.NW_018513311v1 110652 2 + 287728 CA i aotNan1.NW_018513311v1 I 26 C 0 e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e colAng1.NW_012118821v1 1388833 0 - 13651311 C e manLeu1.NW_012103754v1 953093 0 - 2200435 C e cerAty1.NW_012000820v1 1392990 0 - 10304083 C e macNem1.NW_012011978v1 1438576 0 + 3644372 C e macFas5.chr13 1410447 0 - 111193037 C a score=212784.000000 s hg38.chr2_KI270774v1_alt 121174 73 + 223625 TACTTCTGATTTTATTAAAGAAATATAAGACATTGAATTCTGCATTCCTAAGCACAATTATCTTAAGAATCAG s panTro5.chr2A 1410288 73 + 111504155 TACTTCTGATTTTATTAAAGAAATATAAGACATTGAATTCTGCATTCCTAAGCACGATTATCTTAAGAATCAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1359053 73 + 114371477 TACTTCTGATTTTATTAAAGAAATATAAGACATTGAATTCTGCATTCCTAAGCATGATTATCTTAAGAATCAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1383581 72 + 1464242 TACTTATGATTTTATTAAAGAAATATAAGACATTGAATTCTGCATTCCTAAGCACGATTATCTTAAGAATC-G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1107338 68 + 81552678 TACTTCTGATTTTATTAAAGAAATATAAGACATTGAATTCTGCATTCCTAAGCACGA-----TTAAGAATCAG i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1384158 73 - 108792865 TACTTCTGATTTTATTAAAGAAACGTAAGACACTGAATTCTGCATTCCTAAGCACGATTATCTTGAGAATCAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1229623 73 - 7082604 TAGTTGTGATTTTATTAAAGAAGTATAAAACACTGAATTCTGCATTCCTAAGCACCATTATCTTAAGAATCAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1318236 73 + 1864846 TACTTGTGATTTTATTAAAGAAATATAAAACATTGAATTCTGCATTCCTAAGCACGATTATCTTAAGAATCAG i cebCap1.NW_016107827v1 C 0 I 120 s aotNan1.NW_018513311v1 110654 73 + 287728 TACTTCTGATTTTATTAAAGAAATATAAAACATTGAACTCTGCATTGCTAAGCACGATTATCTTAAGAATCAG i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e colAng1.NW_012118821v1 1388833 0 - 13651311 C e manLeu1.NW_012103754v1 953093 0 - 2200435 C e chlSab2.chr14 1465338 117 - 107702431 I e cerAty1.NW_012000820v1 1392990 0 - 10304083 C e macNem1.NW_012011978v1 1438576 0 + 3644372 C e macFas5.chr13 1410447 0 - 111193037 C e rheMac8.chr13 1438007 104 + 108979918 I a score=106535.000000 s hg38.chr2_KI270774v1_alt 121247 51 + 223625 CGAG---TCATACTTTCCATATGTTTTCAACACCTCTAGCGTGTCTTAAACAGC s panTro5.chr2A 1410361 51 + 111504155 CGAG---TCATACTTCCCATATGTTTTCAACACCTCTAGCGTGTCTTAAACAGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1359126 51 + 114371477 CGAG---TCATACTTCCCGTATGTTTTCAACACCTCTAGCGTGTCTTAAACAGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1383653 51 + 1464242 CGAG---TCATACTTCCCATATGTTTTCAACACCTCTAGCGTGTCTTAAACAGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1107406 51 + 81552678 CGAG---TCATACTTCCCGTATGTTTTCAACACCTCTGGCATGTCTTAAACAGC i nomLeu3.chr19 C 0 I 7 s calJac3.chr14 1384231 54 - 108792865 GGAGTCTTCATACTTCCTGAATGTGTTCAACACCTCGGGCATATCTTAAACAGC i calJac3.chr14 C 0 I 7 s saiBol1.JH378218 1229696 54 - 7082604 GAAGTCTTCATACTTCCTGAATGTGTTCAACACCCCTGGCATGTCTTAAACAGC i saiBol1.JH378218 C 0 I 7 s aotNan1.NW_018513311v1 110727 54 + 287728 GGAGTCTTCATACTTCCTGAATGTGTTCAACACCTCTGGCATGTCTTAAACAGC i aotNan1.NW_018513311v1 C 0 I 44 e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1318309 120 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e colAng1.NW_012118821v1 1388833 0 - 13651311 C e manLeu1.NW_012103754v1 953093 0 - 2200435 C e chlSab2.chr14 1465338 117 - 107702431 I e cerAty1.NW_012000820v1 1392990 0 - 10304083 C e macNem1.NW_012011978v1 1438576 0 + 3644372 C e macFas5.chr13 1410447 0 - 111193037 C e rheMac8.chr13 1438007 104 + 108979918 I a score=19332.000000 s hg38.chr2_KI270774v1_alt 121298 12 + 223625 GTTAACAAGTCT s panTro5.chr2A 1410412 12 + 111504155 GTTAACAAGTCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1359177 12 + 114371477 GTTAACAAGTCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1383704 12 + 1464242 GTTAACAAGTCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1107464 11 + 81552678 GTTAACAAGTC- i nomLeu3.chr19 I 7 C 0 s calJac3.chr14 1384292 12 - 108792865 GTTAACACGTCT i calJac3.chr14 I 7 I 27 s saiBol1.JH378218 1229757 12 - 7082604 GTTAACAAGTCT i saiBol1.JH378218 I 7 I 24 e aotNan1.NW_018513311v1 110781 44 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1318309 120 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e colAng1.NW_012118821v1 1388833 0 - 13651311 C e manLeu1.NW_012103754v1 953093 0 - 2200435 C e chlSab2.chr14 1465338 117 - 107702431 I e cerAty1.NW_012000820v1 1392990 0 - 10304083 C e macNem1.NW_012011978v1 1438576 0 + 3644372 C e macFas5.chr13 1410447 0 - 111193037 C e rheMac8.chr13 1438007 104 + 108979918 I a score=503306.000000 s hg38.chr2_KI270774v1_alt 121310 572 + 223625 GGGACTCTCCGTGGCCCGAAGCAC-TTTCACCAGACGGGTCCGTGATGGAGCTCCTTGGGTTCTAGGTTTTCCTTGAGACCTCCTAACTTTTTTCCATTTCCTTTTCTGCCTGCTGCCTTCTGTCTGTCAGCCATGACCCAGACCTCAGGTGCATTCTGATGGCTCTCCCTACGGAGGTCGACCCAGGGGCCACCCCGCACCCAC-----CCCCACCCTGCCCCACGTCCCTCCTCCACGTCAGGGGGATGATGAATTCAGCCATGTGCAACATTGTGGGCATCCttaaagcaaattgcagtggagggtgaattacagtgcttggggaatccccgagcaaagccagtaggcctcacacatgatctaaatcttgcttgatttgcaaacagaagagaaacttaactggaga---tttttttttttttgcaaatgcctggattaaagaaaaatgaaatataagcccgaccattccgaaactgccaactaacctgtttaactaggaaccttccagcaggacagaccaaataatgcgaaactgaagccagtcaaagcttttctccaatgacgtctacatccacctg s panTro5.chr2A 1410424 575 + 111504155 GGGACTCTCTGTGGCCCGAAGCAC-TTTCACCAGACGGGTCCGTGATGGAGCTCCTTGGGTTCTAGGTTTTCCTTGAGACCTCCTAACTTTTTTCCATTTCCTTTTCCGCCTGCTGCCTTCTGTCTGTCAGCCATGACCCAGACCTCAGGTGCATTCTGATGGCTCTCCCCACGGAGGTCGACCCAGGGGccaccccccacccac-----ccccaccctgccccacgtccctcctccACGTCAGGGGGATGATGAATTCAGCCATGTGCAACATCGTGGGCATCCttaaagcaaattgcagtggagggtgaattacagtgcttggggaatccctgagcaaagccagtaggcctcacacatgatctaaatcttgcttgatttgcaaacagaagagaaacttagctggagattttttttttttttttgcaaatgcctggattaaagaaaaatgaaatataaacccgaccattccgaaactgccaactaacctgtttaactaggaaccttccagcaggacagaccaaataatgcgaaactgaagccagtcaaagcttttctccagtgacgtctatatccacctg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1359189 573 + 114371477 GGGACTCTCTGTGGCCCGAAGCAC-TTTCACCAGATGGGTCCGTGATGGAGCTCCTTGGGTTCTAGGTTTTCCTTGAGACCTCCTAACTTTTTTCCATTTCCTTTTCCGCCTGCTGCCTTCTGTCTGTCAGCCATGACCCAGACCTCAGGCGCATTCTGATGGCTCTCCCCACGGAGGTCGACCCAGGGGccaccccccacccac-----ccccaccctgccccacgtccctcctccACGTCAGGGGGATGATGAATTCAGCCATGTGCAACATCGTGGGCATCCttaaagcaaattgcagtggagggtgaattacagtgcttggggaatccctgagcaaagccagtaggcctcacacatgatctaaatcttgcttgatttgcaaacagaagagaaacttagctggaga--ttttttttttttttgcaaatgcctggattaaagaaaaatgaaatataagcccgaccattccgaaactgccaactaacctgtttaactaggaaccttccagcaggacagaccaaataatgcgaaactgaagccagtcaaagcttttctccagtgacgtctatatccacctg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1383716 574 + 1464242 GGGACTCTCCGTGGCCCGAAGCAC-TTTCACCAGACGGGTCCGTGATGGAGCTCCTTGGGTTCTAGGTTTTCCTTGAGACCTCCTAACTTTTTTCCATTTCCTTTTCTGCCTGCTGCCTTCTGTCTGTCAGCCATGACCCAGACCTCAGGTGCATTCTGATGGCTCTCCCCATAGAGGTCAACCCAGGGGccaccccccacccac-----ccccaccccgccccAGGTCCCTCCTCCACGTCAGGGGGATGATGAATTCAGCCATGTGCAACATCGTGGGCATCCttaaagcaaattgtagtggagggtgaattacagtgcttggggaatccctgagcaaagccagtaggcctcacacatgatctaaaccttgcttgatttgcaaacagaagagaaacttaactggaga-tttttttttttttttgcaaatgcctggattaaagaaaaatgacatataagcctgaccattccgaaactgccaactaacctgtttaactaggaaccttccagcaggacagaccaagtaatgcaaaactgaagccagtcaaagcttttctccaatgacgtctacatccacctg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1107475 580 + 81552678 -AGACTCTCCGTGGCCCGAAGCACTTTTCACCAGACGGGTCCCTGATGGAGCTCTTTGGGTTCTAGGTTTTCCTTGAGACCTCCTAACTTTTTTCCATTTCCTTTTCTGGCCGCTGCCTTCTGCCTGTCAGCCATGACCCAGACCTCAGGTGCATTCTGATGGCTTTCCCCACGGAGGTTGACTCAGGGGCTGGCCCCCACCCGCTGCCGCCCCACCTGGCCCCATGTCCCTCCTCTACGTCAGGGGGATGATGAATTCAGCCATGTGCAACATCGTGGGGATCCTGAAAGCAAACGACAGTGGAGGGTGAATTCCAGTgcttggggaacccctgagcaaagccggtaggcctcacacatgctctaaatcttgcttgatttgcaaacagaagagaaacttcactggagattttttttttttttttgcaaatgcctgaattaaagaaaaatgaaatataagcctgaccattctgagactgccaactaacctgtttaactaggaaccttccagcagggcagaccaaataatgcaagactgaagccagtcaaagctcttctccaatgacgtctccatccacctg i nomLeu3.chr19 C 0 C 0 e aotNan1.NW_018513311v1 110781 44 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1229769 24 - 7082604 I e cebCap1.NW_016107827v1 1318309 120 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1384304 27 - 108792865 I e colAng1.NW_012118821v1 1388833 0 - 13651311 C e manLeu1.NW_012103754v1 953093 0 - 2200435 C e chlSab2.chr14 1465338 117 - 107702431 I e cerAty1.NW_012000820v1 1392990 0 - 10304083 C e macNem1.NW_012011978v1 1438576 0 + 3644372 C e macFas5.chr13 1410447 0 - 111193037 C e rheMac8.chr13 1438007 104 + 108979918 I a score=272781.000000 s hg38.chr2_KI270774v1_alt 121882 73 + 223625 caaagcctgcccctgggtcctgcagtagagcctgaacctttctttggtttgatgcttcctgattcataaatca s panTro5.chr2A 1410999 73 + 111504155 caaagcctgcccctgggtcctgcagtagagcctgaacctttctttggtttggtgcttcctgattcataaatca i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1359762 73 + 114371477 caaagcctgcccctgggtcctgcagtagagcctgaacctttctttggtttggtgcttcctgattcataaatca i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1384290 73 + 1464242 caaagcctgcccctgggtcctgcagtagagcctgaacctttctttggtttgatgcttcctgattcataaatca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1108055 72 + 81552678 caaagcctgcccc-gggtcctgcagtggagcctcagcctttctttggtttggtgcttcctgattcataaatca i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1410447 73 - 111193037 Caaagcctgcccctgggtcctgcaaaagagcctgaaactttctttggtttggtgcttcctcatgcataaatca i macFas5.chr13 C 0 I 29 s macNem1.NW_012011978v1 1438576 73 + 3644372 CAAAGCCTGCCCCTGGGTCCTGCAAGAGAGCCTGAAACTTTCTTTGGTTTGGTGCTTCCTCATGCATAAATCA i macNem1.NW_012011978v1 C 0 I 17 s cerAty1.NW_012000820v1 1392990 73 - 10304083 Caaagcctgcccctaggtcctgcaataaagcctgaacctttctttggtttggtgcttcctcattcataagtca i cerAty1.NW_012000820v1 C 0 I 1 s manLeu1.NW_012103754v1 953093 73 - 2200435 Caaagcctgcccctgggtcctgcaaaagagcctgaacctgtttttggtttggtgcttcctcattcataagtca i manLeu1.NW_012103754v1 C 0 I 1 s colAng1.NW_012118821v1 1388833 73 - 13651311 Caaagcctccccctgggtcctgcaatagagcctgaacctttctttggtttggtgcttcctcattcataaatca i colAng1.NW_012118821v1 C 0 I 1 e aotNan1.NW_018513311v1 110781 44 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1229769 24 - 7082604 I e cebCap1.NW_016107827v1 1318309 120 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1384304 27 - 108792865 I e chlSab2.chr14 1465338 117 - 107702431 I e rheMac8.chr13 1438007 104 + 108979918 I a score=19642.000000 s hg38.chr2_KI270774v1_alt 121955 8 + 223625 tgatcact s panTro5.chr2A 1411072 8 + 111504155 tgttcact i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1359835 8 + 114371477 tgttcact i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1384363 8 + 1464242 tgttcact i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1108127 8 + 81552678 tgttcact i nomLeu3.chr19 C 0 C 0 s cerAty1.NW_012000820v1 1393064 8 - 10304083 tgttcact i cerAty1.NW_012000820v1 I 1 C 0 s manLeu1.NW_012103754v1 953167 8 - 2200435 tgttcact i manLeu1.NW_012103754v1 I 1 C 0 s colAng1.NW_012118821v1 1388907 8 - 13651311 tgttcact i colAng1.NW_012118821v1 I 1 C 0 e aotNan1.NW_018513311v1 110781 44 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1229769 24 - 7082604 I e cebCap1.NW_016107827v1 1318309 120 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1384304 27 - 108792865 I e chlSab2.chr14 1465338 117 - 107702431 I e macNem1.NW_012011978v1 1438649 17 + 3644372 I e macFas5.chr13 1410520 29 - 111193037 I e rheMac8.chr13 1438007 104 + 108979918 I a score=4500.000000 s hg38.chr2_KI270774v1_alt 121963 1 + 223625 c s panTro5.chr2A 1411080 1 + 111504155 c i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1359843 1 + 114371477 c i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1384371 1 + 1464242 c i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1108135 1 + 81552678 c i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1410549 1 - 111193037 c i macFas5.chr13 I 29 C 0 s macNem1.NW_012011978v1 1438666 1 + 3644372 c i macNem1.NW_012011978v1 I 17 C 0 s cerAty1.NW_012000820v1 1393072 1 - 10304083 c i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 953175 1 - 2200435 c i manLeu1.NW_012103754v1 C 0 I 17 s colAng1.NW_012118821v1 1388915 1 - 13651311 c i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 110781 44 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1229769 24 - 7082604 I e cebCap1.NW_016107827v1 1318309 120 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1384304 27 - 108792865 I e chlSab2.chr14 1465338 117 - 107702431 I e rheMac8.chr13 1438007 104 + 108979918 I a score=11334.000000 s hg38.chr2_KI270774v1_alt 121964 3 + 223625 aaa s panTro5.chr2A 1411081 3 + 111504155 aaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1359844 3 + 114371477 aaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1384372 3 + 1464242 aaa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1108136 3 + 81552678 aaa i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1410550 3 - 111193037 aac i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1438667 3 + 3644372 aac i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1393073 3 - 10304083 aaa i cerAty1.NW_012000820v1 C 0 I 9 s chlSab2.chr14 1465455 3 - 107702431 aaa i chlSab2.chr14 I 117 C 0 s manLeu1.NW_012103754v1 953193 3 - 2200435 aaa i manLeu1.NW_012103754v1 I 17 C 0 s colAng1.NW_012118821v1 1388916 3 - 13651311 aaa i colAng1.NW_012118821v1 C 0 I 19 e aotNan1.NW_018513311v1 110781 44 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1229769 24 - 7082604 I e cebCap1.NW_016107827v1 1318309 120 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1384304 27 - 108792865 I e rheMac8.chr13 1438007 104 + 108979918 I a score=2036734.000000 s hg38.chr2_KI270774v1_alt 121967 368 + 223625 aaaaactctttaaaaaatgtattgtgcctaagtttacattttaacaACCTCAAGACCAGGGCCTCAGCCGGCAGCAGTGAGTTCCTGCTCGGCCCTTCTGAAAGGCCCTGCTGCTGTCTTGGGCGTCTCTGCCCCAGCTGCTGGGCGGGCTCCACTGACGCTCCTGGGAGAATCTCTGCTGACCACACAATGACATTGGCACTGGGAGCTGTGATCTGGGGACACTTAGATCTGAGCTGGTTTCTCTCCTTCTGTGGTGACAGCTACAGTTTTCATTAAGAATTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACATTGTATTCCACCAAAAATAAAACATCTGCTCAGAAATCG s panTro5.chr2A 1411084 368 + 111504155 aaaaactctttaaaaaatgtattgtgcctcagtttacattttaacaACCTGAAGACCAGGGTCTCAGCTGGCAGCAGTGAGTTCCTGCTCGGCCCTTCTGAAAGGCCCTGCTGCTGTCTTGGGCGCCTCTGCCCCAGCTGCTGGGCGGGCTCCACTGACGCTCCTGGGAGAATCTCTGCTGACCACACAATGACATTGGCACTGGGAGCTGTGATCTGGGGACACTTAGATCTGAGCTGGTTTCTCTCCTTCTGTGGTGACAGCTACAGTTTTCATTAAGAATTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACATTGTATTCCACCAAAAATAAAACATCTGCTCAGAAATCG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1359847 368 + 114371477 aaaaactctttaaaaaatgtattgtgcctcagtttacattttaacaACCTGAAGACCAGGGTCTCAGCTGGCAGCAGTGAGTTCCTGCTCGGCCCTTCTGAAAGGCCCTGCTGCTGTCTTGGGCGCCTCTGCCCCAGCTGCTGGGCGGGCTCCACTGACGCTCCTGGGAGAATCTCTGCTGACCACACAATGACATTGGCACTGGGAGCTGTGATCTGGGGACACTTAGATCTGAGCTGGTTTCTCTCCTTCTGTGGTGACAGCTACAGTTTTCATTAAGAATTCACAGCATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACATTGTATTCCACCAAAAATAAAACATCTGCTCAGAAATCG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1384375 365 + 1464242 aaaaactctttaaaaaatgtattgtgcctcagtttacattttaacaACCTCAAGACCAGGGCCTCAGCCGGCAGCAGTGAGTTCCTGCTTGGCCCTTCTGAAAGGCCCTGCTGCTGTCTTGGGCGCCTCTGCCCCAGCTGCTGGGTGGGCTCCACTGACGCTCCTGGGAGAATCTCTGCTGACCACACAATGACATTGGCACTGGGAGCTGTGATCTGGGGACACTTAGATCTGAGCTGGTTTCTCTCCTTCTGTGGTGACAGCTACAGTTTTCATTAAGAATTTACAGAATCTGGATCTAAAATCTCCTACGTTCAAGGCTTCACACATTGTATTCCACCAAAAATAAAACAT---CTCAGAAATCG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1108139 368 + 81552678 aaaaactctttaaaaaatgtgttgtgcctcagtttacattttaacaACCTCAAGACCAGGGCCTCAGCCGGCAGCAGTGAGTTCCTGCTCGGCCCTTCCAAGCGGCGCTGCTGCTGTCTTGGGCGCCTCTGCCCCAGCTGCCGGGCGGGCTCCACTGACGCTCCTGGGAGAATCTCTGCTGACCACACAACGATGTTGGCACTGGGAGCTGTGATCTGAGGACACTTAGATCTGAGCTGGTTTCTCTCCTTCTTTGGTGACAGCTACAGTTTTCATTAAGAATTTACAGCATCTGGATATAAAATCTCCTATGCTCAAGGCTTCACACATTGTATTCCACCAAAAATAAAACATCTGCTCAGAAATCG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1438111 368 + 108979918 aaAAACTCTTTAAAAAATATATTGTGCTTCAGTTTACAATTTAACAACCTCAAGACCAGAGCCTCAGCCAGCACCAATGAATTCCTGCTCGGCCCTTCCTAGAGGCCTTGCTGCTGTCTCGGGCGCCTCTGCCCCTGCTGCTGGGCGAGCTCCACTGATGCTCCTGGGAGAATCTCTGTTGACCATACAACGACGTTGGCACTGGCAGCCGTGATCTGGGGACACTTCGATCTGAGCTGGTTTCTCTCTTTCTGTGGTGACGGCTACAGTTTTCATTAAGAATGTACAGCATCTGGATCTAAAGTCCCCTATGTTCAAGGCTTCACACATTGTATTCCACCAAAAATAAAACATCTGCTCAGAAATCG i rheMac8.chr13 I 104 I 12 s macFas5.chr13 1410553 368 - 111193037 aaaaactctttaaaaaatatattgtgcttcagtttacaatttaacaACCTCAAGACCAGGGCCTCAGCCAGCACCAATGAATTCCTGCTCGGCCCTTCCTAGAGGCCTTGCTGCTGTCTCAGGCGCCTCTGCCCCTGCTGCTGGGCGAGCTCCACTGATGCTCCTGGGAGAATCTCTGTTGACCGTACAACGACGTTGGCACTGGCAGCCGTGATCTGGGGACACTTCAATCTGAGCTGGTTTCTCTCTTTCTGTGGTGACGGCTACAGTTTTCATTAAGAATGTACAGCATCTGGATCTAAAGTCCCCTATGTTCAAGGCTTCACACATTGTATTCCACCAAAAATAAAACATCTGCTCAGAAATCG i macFas5.chr13 C 0 I 7 s macNem1.NW_012011978v1 1438670 368 + 3644372 aaaaacTCTTTAAAAAATATATTGTGCTTCAGTTTACAATTTAACAACCTCAAGACCAGGGCCTCAGCCAGCACCAATGAATTCCTGCTCGGCCCTTCCTAGAGGCCTTGCTGCTGTCTCAGGCGCCTCTGCCCCTGCTGCTGGGCGAGCTCCACTGATGCTCCTGGGAGAATCTCTGTTGACCGTACAACGACGTTGGCACTGGCAGCTGTGATCTGGGGACACTTCGATCTGAGCTGGTTTCTCTCTTTCTGTGGTGACGGCTACAGTTTTCATTAAGAATGTACAGCATCTGGATCTAAAGTCCCCTATGTTCAAGGCTTCACACATTGTATTCCACCAAAAATAAAACATCTGCTCAGAAATCG i macNem1.NW_012011978v1 C 0 I 12 s cerAty1.NW_012000820v1 1393085 368 - 10304083 aaaaaatctttaaaaaatgtattgtgcctcagtttacaatttaacaACCTTAAGACCAGGGCCTCAGCCAGCACCAATGAATTCCTGCTCGGCCCTTCCTAGAGGCCCTGCTGCTGTCTCAGGCGCCTCTGCCCCTGCTGCTGGGCGAGCTCCACTGATGCTCCTGGGAGAATCTCTGCTGACCGTACAACGACGTTGGCACTGGCAGCCGTGATCTGGGGACACTTAGATCTGAGCTGGTTTCTCTCCTTCTGTGGTGATGACTACAGTTTTCATTAAGAATTTACAACATCTGGATCTAAAGTACCCTATGTTCAAGGCTTCACACATTGTATTCCACCAAAAATAAAACATCTGCTCAGAAATCG i cerAty1.NW_012000820v1 I 9 I 3 s chlSab2.chr14 1465458 368 - 107702431 aaaacctctttaaaaaatgtattgtgcttcagtttacaatttaacaACCTCAAGACCAGGGCCTCAGCCAGCACCAATGAGTTCCCGCTCGGCCCTTCCTAGAGGCCTTGCTGCTGTCTCAGGCGCCTCTGCCCCTGCTGCTGGGCGAGCTCCACTGATGCTCCTGGGAGAATCTCTGTTGACCATACAACGACATTGGCACTGGCAGCCGTGATCTGGGTACACTTAGATCTGAGCTGGTTTCTCTCCTTCTGTGGTGACGGCTACAGTTTTCATTAAGAATTTACAGCATCTGGATCTAAAGTCCCCTATGTTCAAGGCTTCACACATTGTATTCCACCAAAAATAAAACATCTGCTCAGAAATCG i chlSab2.chr14 C 0 I 12 s manLeu1.NW_012103754v1 953196 351 - 2200435 aaaacctctttaaaaaatgtattgtgcttcagtttacaatttaacaACCTCAAGACCAGGGCCTCAGCCAGCACCAGTGAGTTCCTGCTCGGCCCTTCCCAGAGGCCCTGCTGCTGTCTCAGGCGCCGCTGCCCCTGCTGCTGGGCGAGCTCCACTGATGCTCCTGGGAGAATCTCTGCTGACCGTACAACGACGTTGGCACTGGCAGCCGTGATCTGGGGACAC----------------TTCTCTCTTTCTGTGGTGACGGCTACAGTTTTCATTAAGAATGTACAGCATCTAGATCTAAAGTCCCCTATGTTCAAGGCTTCACACATTGTATTCCACCAAAAATAAAACATCTGCTCAGAAGTC- i manLeu1.NW_012103754v1 C 0 I 8 s colAng1.NW_012118821v1 1388938 368 - 13651311 caaaactctttaaaaaatgtatcgtgcttcagtttacaatttaacaACCTCAAGACCAGGGCCTCAGCCAGCACCAATGAGTTCCCGCTCGGCCCTTCCTAGAGGCCCTGCTGCTATCTCAGGCGCCTCTGCCCCTGCTGCTGAGCAAGCTCCAGTGATGCTCCTGGGAGAATCTCTGCTGATCATACAATGCCATTGGCCCTGGCAGCCGTGATCTGGGGACACTTAGATCTGAGCTGGTTTCTCTCCTTCTGTGGTGACGGCTACAGTTTTCATTAAGAATTTACAGCATCTGGATCTAAAGTCCGCTATGTTCAAGTCTTCACGCATTGTATTCCACCAAAAATGAAACATCTGCTCAGAAATCG i colAng1.NW_012118821v1 I 19 I 7 e aotNan1.NW_018513311v1 110781 44 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1229769 24 - 7082604 I e cebCap1.NW_016107827v1 1318309 120 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1384304 27 - 108792865 I a score=1952.000000 s hg38.chr2_KI270774v1_alt 122335 8 + 223625 GTCAC---TTG s panTro5.chr2A 1411452 8 + 111504155 GTCAC---TTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1360215 8 + 114371477 GTCAC---TTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1384740 8 + 1464242 GTCAC---TTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1108507 8 + 81552678 GTCAC---TTG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1410928 5 - 111193037 CTCAC------ i macFas5.chr13 I 7 C 0 s cerAty1.NW_012000820v1 1393456 5 - 10304083 CTCAC------ i cerAty1.NW_012000820v1 I 3 C 0 s manLeu1.NW_012103754v1 953555 5 - 2200435 CTCAC------ i manLeu1.NW_012103754v1 I 8 C 0 s colAng1.NW_012118821v1 1389313 8 - 13651311 CTCACTTG--- i colAng1.NW_012118821v1 I 7 C 0 e aotNan1.NW_018513311v1 110781 44 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1229769 24 - 7082604 I e cebCap1.NW_016107827v1 1318309 120 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1384304 27 - 108792865 I e chlSab2.chr14 1465826 12 - 107702431 I e macNem1.NW_012011978v1 1439038 12 + 3644372 I e rheMac8.chr13 1438479 12 + 108979918 I a score=244734.000000 s hg38.chr2_KI270774v1_alt 122343 44 + 223625 Ttgttataaaagtgagccacagagggcccctgacccttggcccc s panTro5.chr2A 1411460 44 + 111504155 Ttgttataaaagtgagccacagagggcccctgacccttggcccc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1360223 44 + 114371477 Ttgttataaaagtgagccacagagggcccctgacccttggcccc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1384748 44 + 1464242 Ttgttataaaagtgagccacagagggcccctgccccttggcccc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1108515 44 + 81552678 TTTttataaaagtgagccacagagggcccctgccccttggcctc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1438491 44 + 108979918 Ttgttacaaaagtgagccacagaggacccctgccccttggcccc i rheMac8.chr13 I 12 C 0 s macFas5.chr13 1410933 44 - 111193037 Ttgttacaaaagtgagccacagaggacccctgccccttggcccc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1439050 44 + 3644372 Ttgttacaaaagtgagccacagaggacccctgccccttggcccc i macNem1.NW_012011978v1 I 12 C 0 s cerAty1.NW_012000820v1 1393461 43 - 10304083 Ttgttacaaaagtgagccacagaggg-ccctgccccttggcccc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1465838 43 - 107702431 Ttgttataaaagtaagccacagaggg-ccctgccccttggcccc i chlSab2.chr14 I 12 C 0 s manLeu1.NW_012103754v1 953560 44 - 2200435 Ttgttataaagatgagccacagagggcccctgccccttggcccc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1389321 44 - 13651311 Ttgttataaaagtgagcctcagaggacccctgccccttggcccc i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 110781 44 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1229769 24 - 7082604 I e cebCap1.NW_016107827v1 1318309 120 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1384304 27 - 108792865 I a score=7098.000000 s hg38.chr2_KI270774v1_alt 122387 1 + 223625 t s panTro5.chr2A 1411504 1 + 111504155 t i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1360267 1 + 114371477 t i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1384792 1 + 1464242 t i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1108559 1 + 81552678 t i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1438535 1 + 108979918 t i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1410977 1 - 111193037 t i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1439094 1 + 3644372 t i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1393504 1 - 10304083 t i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1465881 1 - 107702431 t i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 953604 1 - 2200435 t i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1389365 1 - 13651311 t i colAng1.NW_012118821v1 C 0 C 0 s aotNan1.NW_018513311v1 110825 1 + 287728 t i aotNan1.NW_018513311v1 I 44 C 0 e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1229769 24 - 7082604 I e cebCap1.NW_016107827v1 1318309 120 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1384304 27 - 108792865 I a score=9100.000000 s hg38.chr2_KI270774v1_alt 122388 1 + 223625 g s panTro5.chr2A 1411505 1 + 111504155 g i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1360268 1 + 114371477 g i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1384793 1 + 1464242 g i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1108560 1 + 81552678 g i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1438536 1 + 108979918 g i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1410978 1 - 111193037 g i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1439095 1 + 3644372 g i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1393505 1 - 10304083 g i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1465882 1 - 107702431 g i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 953605 1 - 2200435 g i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1389366 1 - 13651311 g i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1229793 1 - 7082604 G i saiBol1.JH378218 I 24 C 0 s aotNan1.NW_018513311v1 110826 1 + 287728 g i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1318309 120 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1384304 27 - 108792865 I a score=204672.000000 s hg38.chr2_KI270774v1_alt 122389 24 + 223625 ggtggtttattttttctctgcagg s panTro5.chr2A 1411506 24 + 111504155 ggtggtttaatttttctctgcagg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1360269 24 + 114371477 ggtggtttaatttttctctgcagg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1384794 23 + 1464242 ggtggtttaa-ttttctctgcagg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1108561 24 + 81552678 ggtggtttattttttctctgcagg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1438537 24 + 108979918 ggtggtttactttttctctgcagg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1410979 24 - 111193037 ggtggtttactttttctctgcagg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1439096 24 + 3644372 ggtggtttactttttctctgcagg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1393506 24 - 10304083 ggtggtttactttttctctgcagg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1465883 24 - 107702431 ggtagtttattttttctctgcagg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 953606 24 - 2200435 ggtagtttatttttaatctgcagg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1389367 24 - 13651311 ggtggtttattttttctctgcagg i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1384331 24 - 108792865 ggtggttcatcttttctctgcagg i calJac3.chr14 I 27 I 6 s saiBol1.JH378218 1229794 24 - 7082604 ggtggttcattttttctctgcagg i saiBol1.JH378218 C 0 I 6 s aotNan1.NW_018513311v1 110827 24 + 287728 ggtggttcattttttctctgcagg i aotNan1.NW_018513311v1 C 0 I 6 e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1318309 120 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=5399865.000000 s hg38.chr2_KI270774v1_alt 122413 588 + 223625 c------ctgttagtgccaaagcccaccaagaccaagctcaaatttactcatgcccaattgtgataaaaatagcccaaacaagcagacttttagccacttggagcctacctctttgcatcttccacaaaacctctcccagcatctcaggccgttggtaagatacagcctcgtggtcatcagaccccaggtcgctgctgtctctggagttgcctgcccagagactccccctctccccctcaccatgttgctgagtaatgtcaccagacatggagaccctctgatgccccactgtgagttcctcgccatcctccccatctgggtggcggtccctcaccttagcctctggatggtcccctgccttgagggatgtcccctcttctgcacctgtgcccaagaaccaccccaaaggcatgtgtgtgtctctgcctcccc-gatcctaacttttgccttgctcagccctgagttcccAGAGCTT-CCCCATACCCACTAAATTGCTAAGTTCCCCCCCAGCGGTCTCCTAAGCCGCTTCGGCGTCCCTCTCAGTCACCAGCACCTGGTTCCCCACCCACACCTTCCCATCTTTGTCTGGGCTG s panTro5.chr2A 1411530 572 + 111504155 c------ctgttagtgccaaagcccaccaagaccaagctcaaatttactcatgcccaattgtgataaaaatagcccaaacaagcagacttttagccacttggagcctacctctttgcatcttccacaaaacctctcccagcatctcaggccgttggtaagatacagcctcgtgatcatcagaccccaggtcgctgctgtctctggagttgcctgcccagagactccccctctccccctcaccatgttgctgagtaatgtcaccagacatagagaccctctgatgccccactgtgagttcctcgccattctccccgtctgggtggtggtccctcaccttagcctctggatggtcccctgccttga-ggatgtcccctcttctgcacctgtgcccaagaaccaccccaaaggcatgtgtgtgtctctgcctcccc-gatcctaacttttgccttgctcagccctgagttcccAGAGCTT-CCCCACACCCACTAAATTGCTAAGTTCCCCTCCAGCAGTCTCCTAAGCCGCTTCGGCGTCCCTCTCAG---------------TCCCCACCCACACCTTCCCATCCTTGTCTGGGCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1360293 572 + 114371477 c------ctgttagtgccaaagcccaccaagaccaagctcaaatttactcatgcccaattgtgataaaaatagcccaaacaagcagacttttagccacttggagcctacctctttgcatcttccacaaaacctctcccagcatctcaggccgttggtaagatacagccttgtgatcatcagaccccaggtcgctgctgtctctggagttgcctgcccagagactccccctctccccctcaccatgttgctgagtaatgtcaccagacatagagaccctctgatgccccactgtgagttcctcgccattctccccgtctgggtggtggtccctcaccttagcctctggatggtcccctgccttga-ggatgtcccctcttctgcacctgtgcccaagaaccaccccaaaggcatgtgtgtgtctctgcctcccc-gatcctaacttttgccttgctcagccctgagttcccAGAGCTT-CCCCACACCCACTAAATTGCTAAGTTCCCCTCCAGCAGTCTCCTAAGCCGCTTCGGCGTCCCTCTCAG---------------TCCCCACCCACACCTTCCCATCCTTGTCTGGGCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1384817 587 + 1464242 c------ctgttagtgccaaagcccaccaagaccaagctcaaatttattcatgcccaattgtgataaaaatagcccaaacaagcagatttttagccacttggagcctccctctttgcatcttccacaaaacctctcccagcatctcaggccgttggtaagatacagcctcgtggtcatcagaccccaggtcgctgctgtctctggagttgcctgcccagag-ctccccctctccccctcaccatgttgctgagtaatgtcaccagacatggagaccctctgatgccccactgtgagttccttgccatcctctccatctgggtggtggtccctcaccttagcctctggatggtcccctgccttgaggggtgtcccctcttctgcacctgtgcccaagaaccaccccaaaggcatgtgtgtgtctctgcctcccc-gctcctaacttttgccttgctcagccctgagttcccagagctt-ctccacaCCCACTACATTGCTAAGTTCCCCTCCAGCGGTCTCCTAAGCCGCTTCAGTGTCCCTCTCAGTCACCAGCACCTGGTTCCCCACCTACACCTTCCCATCCTTGCCTGGGCTG i gorGor5.CYUI01015607v1 C 0 I 957 s nomLeu3.chr19 1108585 592 + 81552678 ctgagatctgttagtgccgaagcccgctaggaccaagctcaaatttattcatgcccaatcgtgataaaaatagctcaaacaagcagatttttagccacttggagcctacctctttgcatcttccacaaaacctctcccagcatctcaggctgttggtaagatacagcctcgtggtcatcagaccccaggtcgctgctgtctgtggagttgcctgcccagagactcccc--ctccacctcaccatgttgctgagtaatgtcaccagacacagagaccctctgacgccccaccatgagttcctcgccgtcctccccatctgggtggtggtccctcaccttagcctctggatggtcccctgccttgagggatgtcccctcttctgcacttgtgcccaagaaccaccccaaaggtatgtgtgtgtctctgcctcccc-gatcctaacttttgccttgctcagccctgagttcccAGAGCTT-CCCCACGCCCACTAAGTTGTGAAGCTCTCCTCCAGCGGTCTCCTAAGCCGCTTCAGCGTCCCTCTCAGTCACCAGCACCTGGTTCCCCACCCACACCTTCCCATCCTTGCCTGGGCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1438561 593 + 108979918 ctgagacctgttagtgccaaagcctcctaggatcaagctcaaatttattcatgcccagttgtgaaaaaaacagcccaaacgagcagatttttagccccttggagcctacctctttgtgtcttccacaaaacttctcccagtatctcaggccattggtaagatacagccttgtggtcatcagaccccaggtcgctgctgccgctggagttgcctggccagagactcccc--ctccacctcaccatgttgctgagtaaagtcatcagacacagagaccctctgatgccccaccgtgagttcctcaccatcctccccatctgcgtggcggtccctcaccttagcctctggatggtcccctgccttgagggatgtcccctcttctgcacctgtgcccaagagccaccctaaaggcatgtgtgtgtctctgcctcccctggtcctaacttttgccttgctcagccctgagttcccAGAGCTT-CCCCACACCCAGTAAGTTGCTAAGTTCCCCTCCAGCGGTCTCCTAAGCCACGTTAGCGTCCCTCTCAGTCACCAGCACCTGGTTCCCCACCCACACCTTCCCATCCTTGCCTGGGCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1411003 593 - 111193037 ctgagacctgttagtgccaaagcctcctaggatcaagctcaaatttattcatgcccagttgtgaaaaaaacagcccaaacgagcagatttttagccacttggagcctacctctttgtgtcttccacaaaacttctcccagtatctcaggccattggtaagatacagccttgtggtcatcagaccccaggtcgctgctgccgctggagttgcctggccagagactcccc--ctccacctcaccatgttgctgagtaaagtcatcagacacagagaccctctgatgccccaccgtgagttcctcaccatcctccccatctgcgtggcggtccctcaccttagcctctggatggtcccctgccttgagggatgtcccctcttctgcacctgtgcccaagagccaccctaaaggcatgtgtgtgtctctgcctcccctggtcctaacttttgccttgctcagccctgagttcccAGAGCTT-CCCCACACCCAGTAAGTTGCTAAGTTCCCCTCCAGCGGTCTCCTAAGCCACGTTAGCGTCCCTCTCAGTCACCAGCACCTGGTTCCCCACCCACACCTTCCCATCCTTGCCTGGGCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1439120 593 + 3644372 ctgagacctgttagtgccaaagcctcctaggatcaagctcaaatttattcatgcccagttgtgaaaaaaacagcccaaacgagcagatttttagccacttggagcctacctctttgtgtcttccacaaaacttctcccagtatctcaggccattggtaagatacagccttgtggtcatcagaccccaggtcgctgctgccgctggagttgcctggccagagactcccc--ctccacctcaccatgttgctgagtaaagtcatcagacacagagaccctctgatgccccaccgtgagttcctcaccatcctccccatctgcgtggcggtccctcaccttagcctctggatggtcccctgccttgagggatgtcccctcttctgcacctgtgcccaagagccaccctaaaggcatgtgtgtgtctctgcctcccctggtcccaacttttgccttgctcagccctgagttcccAGAGCTT-CCCCACACCCAGTAAGTTGCTAAGTTCCCCTCCAGCGGTCTCCTAAGCCACGTTAGCGTCCCTCTCAGTCACCAGCACCTGGTTCCCCACCCACACCTTCCCATCCTTGCCTGGGCTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1393530 593 - 10304083 ctgagacctgttagtgccaaagcctcctaggatcaagctcaaatttattcatgcccagttgtgaaaaaaagagcccaaacgagcagatttttagccacttggagcctacttctttgtgtcttccacaaaacccctcccagtatcttaggccattggtaagatacagccttgtggtcaacagaccccaggtcgctgctgccgctggagttgcctggccagagactcccc--ctccacctcaccatgttgctgagtaaagtcatcagacacagagaccctctgatgccccaccgtgagttcctcactatcctccccatctgggtggcagtccctcaccttagcctctagatggtcccctgccttgagggatgtcccctcttctgcacctgtgcccaagagccaccccaaaggcatgtgtgtgtctctgcctcccctggtcctaacttttgccttgctcagccctgagttcccAGAGCTT-CCCCACACCCAGTAAGTTGCTAAGTTCCCCTCCAGCGGTCTCCTAAGCCGCGTCAGCGTCCCTCTCAGTCACCAGCACCTGGTTCCCCACCCACACCTTCCCATCCTTGCCTGGGCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1465907 593 - 107702431 ctgagacctgttagtgccaaagcctcctaggaccaagctcgaatttattcatgcccagttgtgaaaaaaacagctcaaacaagcagatttttagccacttggagcctacctccttgtgtcttccacaaaacctctcccagtatctcaggccattggtaagatacagccttgtggtcatcagaccccaggtcgctgctgccgctggagttgcctgcccagagactcccc--ctccacctcaccatgttgctgagtaatgtcatcagacacagagaccctctgatgccccaccgtgagttcctcaccatccttcccatctgggtggcagtccctcaccttagcctctggatggtcccctgccttgagggatgtcccttcttctgcacctgtgcccaagagccaccccaaaggcatgtgtgtgtctctgcctcccctggtcctaacttttgccttgctcagccctgagttcccAGAGCTT-CCCCACACCCAGTAAGTTGCTAAGTTCCCCTCCAGTGGTCTCCTAAGCCACGTCAGCATCCCTCTCAGTCACCAGCACCTGGTTCCCCACCTACACCTTCCCATCCTTGCCTGGGCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 953630 592 - 2200435 ctgagacctgttagtgcc-aagcctcctaggatcaagctcaaatttattcatgcccagttgtgaataaaacagcccaaacgagcagatttttagccacttggagcctacctctttgtgtcttccacaaaacctctcccagtatcttaggccattggtaagatacagccttgtggtcaacagaccccaggtcgctgctgccgctggagttgcctggccagagactcccc--ctccacctcaccatgttgctgagtaaagtcatcagacacagagaccctctgatgccccaccgtgagttcctcaccatcctccccatctgggtggcggtccctcaccttagcctctagatggtcccctgccttgagggatgtcccctcttctgcacctgtgcccaagagccaccccaaaggcatgtgtgtgtctctgcctcccctggtcctaacttttgccttgctcagccctgagttcccAGAGCTT-CCCCACACCCAGTAAGTTGCTAAGTTCCCCTCCAGCGGTCTCCTAAGCCGCGTCAGCGTCCCTCTCAGTCACCAGCACCTGGTTCCCCACCCACACCTTCCCATCCTTGCCTGGGCTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1389391 592 - 13651311 ctgagacctgttagtgccaaagcctcctaggaccaagctcaaatttattcatgcccagttttgataaaaacagcccaaacaagca-atttttagccacttggagcctacctctttgtgtcttccacaaaacctctcccagtctctcaggccattggtaagatacagcctcctggtcatcagaccccaggtcgctgctgctgctggagctgcctgcccggagactcccc--ctccacctcaccatgttgctgagtaatgtcttcagacacagagaccctctgacaccccaccgtgagttccgcaccattctccccatctgggtggcagtccctcaccttagcctctggatggtcccctgccttgagggatgtcgcctcttctgcacctgtgcccaagagccaccccaaaagcatgtgtgtgtctctgtctcccctggtcctaacttctgccttgctcagccctgagttcccAGAGCTT-CCCCACACCCACTAAGTTGCTAAGTTCCCCTCCAGCGGTCTCCTAAGCCGCGTCAGTGTCCCTCTCAGTCACCAGCACCTGGTTTCCCACCCACACCTTCCCATCTTTGCCTGGGCTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1384361 554 - 108792865 ------cctgttagtgccaaaatccaccaggaccaagctcaaatttatacatgtccaactgagataaaaatagcccaaatgagcagagtttaagccacctggagcctacctctttgcagcttccacaaaacctctcccag----------cattggtaagacacagcctcccggtcatcagaccccaggtcactgcttcctctgcagtcgcctgcccagagactcccc--ctctaccttaccatgttgccgagtaa--tcagcagacacggtgaccccctgataccccaccgtgagttcctcgcca-----ccca------------tccctCACCTTAGCCTCTGGATGG-CCCCTGCCTTGAAGAATGCCCCCTCTTCTGCACCTATGCCCAAGAACCACTGCAAAGGCATGCGTGCCTCTCTGCCTCCCCCCGTCCTATCTTTTGCCTTCCCCAGCTCTGAGTTCCCACAACTTCCCCCATGCTCACTAAATTGCTAAGTTCCCCTCCAGCGGCCTCTTAAGCTTCTTCAGTGTCCCTCTCAGTGACCAACCCC----TGCCCACCCACACCTTCCCAGCCTTGCCTGGGTTG i calJac3.chr14 I 6 I 1022 s saiBol1.JH378218 1229824 568 - 7082604 ------cctgttagtgccaaaacccaccaggaccaagctcaaatttatacatgtccaattgagataaaaatagcccagacaaggagcctttaagccacttggagctgacctctttgcatcttccacaaaacctctcccag----------ccttggtaagacacagcctcccagtcatcagaccccaagtcactgctgcctctg-agttgcctgcccagagactcccc--ctctaccttaccatgttgccaagtaa--tcagcagacacggagaccctctgataccccaccgcgagttcctcgccg-----cccatctgggtggtggtccctcaccttagcctctggatgg-cccctgccttgaagaatg-cccattttctgcacctgtgcccaagaaccaccccaaaggtgtgtgtgcctctctgcctcccctggtcctatcttttgccttcatcagccctgagttcccagaacttcccccaTGCTCACTAAATTGTTAAGTTCCCCTCCGGTGGCCTCCTAAGCTTCTTCAGCGTCCCTCTCGGTGACCAGCCCCTGAGTGCCCACCCACACCTTCCCATCCTTGCCTGGGCTG i saiBol1.JH378218 I 6 C 0 s cebCap1.NW_016107827v1 1318429 559 + 1864846 ------cctgttagtgccaaaacccaccaggaccaagctcaaatttatacatgtccaattgagataaaaatggcccagacaagcagacttttagccacatggagccgacctctttgcatgttccacaaaacctctcccgg----------cactggtaagacagagcctcccggtcatcagacccc-ggtcactgctgcctctg----------cccagagactcccc--ctctacctcaccatgttgccgagtaa--tcagcagacatggagaccctctgataccccaccgtgagttccttgcca-----cacatctgggtggtggtcccttgccttagcctctggatgg-cccctgccttgaagaatgccccctcttctgcacctgtgcccaagaaccaccccaaaggtgtgtgtgcctctctgcctcccccggtcctatcttttgccttcatcagccctgagttcccAGAACTTCCCCCATGCTCACTAAATTGCTAACTTCCCCTCCAGTGGCTTCCTAAGCTTCTTCAGCGTCCCTCTCGGTGACCAGCCCCTGAGTGCCCACCCACACCTTCCCATCCTTGCCTGGGCTG i cebCap1.NW_016107827v1 I 120 C 0 s aotNan1.NW_018513311v1 110857 569 + 287728 ------cctgttagtgccaaaacccaccaggaccaagctcaaatttatatacatccaactgagataaaaacagcccaaacaagcagactttaagccacttggagcctacctctttgtatcttccacgaaagctctcccag----------cattggtaagacgcagcctcccggtcatcagcccccaggtcgctgctgcccctgcagttgcctgcccagagactctcc--ctctacctcaccatgttgccgggtaa--tcagcagacacggagaccctctgattccccaccgtgagttcctcgcca-----cctgtctgggtggtgctccctcaccttagcctctggatgg-cccctgccttgaagaatgccccctcttctgcacctgtgcccaagaaccaccccaaaggtgtgtgtgcctctctgcctcccccagtcctatcttttgccttcgttagccctgagttcccAGAACTT-CCCCATGCTCGCTAAATTGCTAAGTTCCCCTCCAGTGGCCTCCTAAGCTTCTTCAGCGTCCCTCTCGGTGACCAGCCCCTGAGTGCCCACCCACACCTTCCCATCCTTGCCTGGGATG i aotNan1.NW_018513311v1 I 6 C 0 e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=20055.000000 s hg38.chr2_KI270774v1_alt 123001 2 + 223625 GT s panTro5.chr2A 1412102 2 + 111504155 GT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1360865 2 + 114371477 GT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386361 2 + 1464242 GT i gorGor5.CYUI01015607v1 I 957 C 0 s nomLeu3.chr19 1109177 2 + 81552678 GT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1439154 2 + 108979918 GT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1411596 2 - 111193037 GT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1439713 2 + 3644372 GT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1394123 2 - 10304083 GT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1466500 2 - 107702431 GT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 954222 2 - 2200435 GT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1389983 2 - 13651311 GT i colAng1.NW_012118821v1 C 0 I 855 s saiBol1.JH378218 1230392 2 - 7082604 GT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1318988 2 + 1864846 GT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 111426 2 + 287728 GT i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1384915 1022 - 108792865 I a score=9100.000000 s hg38.chr2_KI270774v1_alt 123003 1 + 223625 G s panTro5.chr2A 1412104 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1360867 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386363 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1109179 1 + 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1439156 1 + 108979918 G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1411598 1 - 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1439715 1 + 3644372 G i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1394125 1 - 10304083 G i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1466502 1 - 107702431 G i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 954224 1 - 2200435 G i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1230394 1 - 7082604 G i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1318990 1 + 1864846 G i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 111428 1 + 287728 G i aotNan1.NW_018513311v1 C 0 I 2007 e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1384915 1022 - 108792865 I e colAng1.NW_012118821v1 1389985 855 - 13651311 I a score=7800.000000 s hg38.chr2_KI270774v1_alt 123004 1 + 223625 C s panTro5.chr2A 1412105 1 + 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1360868 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386364 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1109180 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1439157 1 + 108979918 C i rheMac8.chr13 C 0 I 851 s macFas5.chr13 1411599 1 - 111193037 C i macFas5.chr13 C 0 I 822 s macNem1.NW_012011978v1 1439716 1 + 3644372 C i macNem1.NW_012011978v1 C 0 I 851 s cerAty1.NW_012000820v1 1394126 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1466503 1 - 107702431 C i chlSab2.chr14 C 0 I 852 s manLeu1.NW_012103754v1 954225 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 I 849 s saiBol1.JH378218 1230395 1 - 7082604 C i saiBol1.JH378218 C 0 I 814 s cebCap1.NW_016107827v1 1318991 1 + 1864846 C i cebCap1.NW_016107827v1 C 0 I 831 e aotNan1.NW_018513311v1 111429 2007 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1384915 1022 - 108792865 I e colAng1.NW_012118821v1 1389985 855 - 13651311 I a score=2865.000000 s hg38.chr2_KI270774v1_alt 123005 2 + 223625 TG s panTro5.chr2A 1412106 2 + 111504155 TG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1360869 2 + 114371477 TG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386365 2 + 1464242 TG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1109181 2 + 81552678 TG i nomLeu3.chr19 C 0 I 794 s cerAty1.NW_012000820v1 1394127 2 - 10304083 TG i cerAty1.NW_012000820v1 C 0 I 849 e aotNan1.NW_018513311v1 111429 2007 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1230396 814 - 7082604 I e cebCap1.NW_016107827v1 1318992 831 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1384915 1022 - 108792865 I e colAng1.NW_012118821v1 1389985 855 - 13651311 I e manLeu1.NW_012103754v1 954226 849 - 2200435 I e chlSab2.chr14 1466504 852 - 107702431 I e macNem1.NW_012011978v1 1439717 851 + 3644372 I e macFas5.chr13 1411600 822 - 111193037 I e rheMac8.chr13 1439158 851 + 108979918 I a score=2168.000000 s hg38.chr2_KI270774v1_alt 123007 11 + 223625 CATTTCCAATG s panTro5.chr2A 1412108 8 + 111504155 CGTTTCCA--- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1360871 8 + 114371477 CGTTTCCA--- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386367 11 + 1464242 CATTTCCACTG i gorGor5.CYUI01015607v1 C 0 C 0 e aotNan1.NW_018513311v1 111429 2007 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1230396 814 - 7082604 I e cebCap1.NW_016107827v1 1318992 831 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1384915 1022 - 108792865 I e colAng1.NW_012118821v1 1389985 855 - 13651311 I e manLeu1.NW_012103754v1 954226 849 - 2200435 I e chlSab2.chr14 1466504 852 - 107702431 I e cerAty1.NW_012000820v1 1394129 849 - 10304083 I e macNem1.NW_012011978v1 1439717 851 + 3644372 I e macFas5.chr13 1411600 822 - 111193037 I e rheMac8.chr13 1439158 851 + 108979918 I e nomLeu3.chr19 1109183 794 + 81552678 I a score=13851.000000 s hg38.chr2_KI270774v1_alt 123018 64 + 223625 TGCTGCGTTTCCACTGTGCTGCGTTTCCAATGTGCTGCATTTCCACTGTGCTGCATTTCCAATG s panTro5.chr2A 1412116 19 + 111504155 ----------CCA-----------------------------------TGCTGCATTTCCACCG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1360879 19 + 114371477 ----------CCA-----------------------------------TGCTGCATTTCCACCG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386378 64 + 1464242 TGCTGCATTTCCAATGTGCTGCATTTCCAATGTGCTGCATTTCCACCGTGCTGCATTTCCAATG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1109977 60 + 81552678 TGCTGC----CCACTGTGCTGCGTTTCCGCTGTGCTGCGTTTCCGCTGTGCTGCGTTTCCGCTG i nomLeu3.chr19 I 794 C 0 e aotNan1.NW_018513311v1 111429 2007 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1230396 814 - 7082604 I e cebCap1.NW_016107827v1 1318992 831 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1384915 1022 - 108792865 I e colAng1.NW_012118821v1 1389985 855 - 13651311 I e manLeu1.NW_012103754v1 954226 849 - 2200435 I e chlSab2.chr14 1466504 852 - 107702431 I e cerAty1.NW_012000820v1 1394129 849 - 10304083 I e macNem1.NW_012011978v1 1439717 851 + 3644372 I e macFas5.chr13 1411600 822 - 111193037 I e rheMac8.chr13 1439158 851 + 108979918 I a score=9336.000000 s hg38.chr2_KI270774v1_alt 123082 10 + 223625 TGCTGCGTTT s panTro5.chr2A 1412135 10 + 111504155 TGCTGCGTTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1360898 10 + 114371477 TGCTGCGTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386442 10 + 1464242 TGCTGCGTTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110037 10 + 81552678 TGCTGCATTT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1412422 6 - 111193037 TGCTGC---- i macFas5.chr13 I 822 C 0 e aotNan1.NW_018513311v1 111429 2007 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1230396 814 - 7082604 I e cebCap1.NW_016107827v1 1318992 831 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1384915 1022 - 108792865 I e colAng1.NW_012118821v1 1389985 855 - 13651311 I e manLeu1.NW_012103754v1 954226 849 - 2200435 I e chlSab2.chr14 1466504 852 - 107702431 I e cerAty1.NW_012000820v1 1394129 849 - 10304083 I e macNem1.NW_012011978v1 1439717 851 + 3644372 I e rheMac8.chr13 1439158 851 + 108979918 I a score=48654.000000 s hg38.chr2_KI270774v1_alt 123092 31 + 223625 CCACCGTGCTGCATTTCCTGCATTCCAAAGA s panTro5.chr2A 1412145 31 + 111504155 CCACCGTGCTGCATTTCCTGCATTCCAAAGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1360908 31 + 114371477 CCACCGTGCTGCATTTCCTGCATTCCAAAGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386452 31 + 1464242 CCACCGTGCTGCATTTCCTGCATTCCAAAGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110047 31 + 81552678 CCAATGTGCTGCATTTCCTGCATTTCCAAGC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1412428 22 - 111193037 CCACCGTGCTGTATTTCC---------AAGC i macFas5.chr13 C 0 C 0 s calJac3.chr14 1385937 22 - 108792865 CCACTGTGCTGTGTTTCC---------AAGC i calJac3.chr14 I 1022 C 0 s saiBol1.JH378218 1231210 22 - 7082604 CCACTGTGCTGTATTTCC---------AAGC i saiBol1.JH378218 I 814 C 0 e aotNan1.NW_018513311v1 111429 2007 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1318992 831 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e colAng1.NW_012118821v1 1389985 855 - 13651311 I e manLeu1.NW_012103754v1 954226 849 - 2200435 I e chlSab2.chr14 1466504 852 - 107702431 I e cerAty1.NW_012000820v1 1394129 849 - 10304083 I e macNem1.NW_012011978v1 1439717 851 + 3644372 I e rheMac8.chr13 1439158 851 + 108979918 I a score=3133.000000 s hg38.chr2_KI270774v1_alt 123123 1 + 223625 G s panTro5.chr2A 1412176 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1360939 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386483 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110078 1 + 81552678 G i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1412450 1 - 111193037 A i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1394978 1 - 10304083 G i cerAty1.NW_012000820v1 I 849 C 0 s manLeu1.NW_012103754v1 955075 1 - 2200435 G i manLeu1.NW_012103754v1 I 849 C 0 s colAng1.NW_012118821v1 1390840 1 - 13651311 G i colAng1.NW_012118821v1 I 855 C 0 s calJac3.chr14 1385959 1 - 108792865 G i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231232 1 - 7082604 G i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 111429 2007 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1318992 831 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e chlSab2.chr14 1466504 852 - 107702431 I e macNem1.NW_012011978v1 1439717 851 + 3644372 I e rheMac8.chr13 1439158 851 + 108979918 I a score=34762.000000 s hg38.chr2_KI270774v1_alt 123124 4 + 223625 ACCT s panTro5.chr2A 1412177 4 + 111504155 ACCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1360940 4 + 114371477 ACCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386484 4 + 1464242 ACCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110079 4 + 81552678 ACCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440009 4 + 108979918 ACCT i rheMac8.chr13 I 851 C 0 s macFas5.chr13 1412451 4 - 111193037 ACCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1440568 4 + 3644372 ACCT i macNem1.NW_012011978v1 I 851 C 0 s cerAty1.NW_012000820v1 1394979 4 - 10304083 ACCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467356 4 - 107702431 ACCT i chlSab2.chr14 I 852 C 0 s manLeu1.NW_012103754v1 955076 4 - 2200435 ACCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1390841 4 - 13651311 ACCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1385960 4 - 108792865 ACCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231233 4 - 7082604 ACCT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 111429 2007 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1318992 831 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=2140440.000000 s hg38.chr2_KI270774v1_alt 123128 250 + 223625 TTGGGTGTTGGCTGCAATGACATCTTTAAGACAAATGTTAGTTGGAATTAACTTTTGAAATTCTAAATGTCGAAATGGTGGATTTTAAAA-CTCATCCATTTCTACTAGTTTTCTTGCTTTATGGTGTGATGTCTGCATGTCACAAGTGGATGGCAGGGTTTCTAAGGCCTTGTTTTTCCTTTGTTGGTATTTTCCTAATTGCCTAGGACGTATCACATAAAATTACTTAACAAGTAGTGGAAAAGAATGA s panTro5.chr2A 1412181 249 + 111504155 TTGGGTGTTGGCTGCAATGACATCTTTAAGACAAATATTAGTTGGAATTAACTTTTGAAATTCTAAATGTCGAAATGGTGGATTTTAAAA-CTCATCCATTTCTACTAGTTTTCTTGCTTTATGGTGTGATGTCTGCATGTCACAAGTGGATGGCAGGGTTTCTAAGG-CTTGTTTTTCCTTTGTTGGTATTTTCCTAATTGCCTAGGACATATCACGTAAAATTACTTAACAAGTAGTGGAAAAGAATGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1360944 249 + 114371477 TTGGGTGTTGGCTGCAATGACATCTTTAAGACAAATATTAGTTGGAATTAACTTTTGAAATTCTAAATGTCGAAATGGTGGATTTTAAAA-CTCATCCATTTCTACTAGTTATCTTGCTTTATGGTGTGATGTCTGCATGTCACAAGTGGATGGCAGGGTTTCTAAGG-CTTGTTTTTCCTTTGTTGGTATTTTCCTAATTGCCTAGGACATATCACGTAAAATTACTTAACAAGTAGTGGAAAAGAATGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386488 249 + 1464242 TTGGGTGTTGGCTGCAATGACATCTTTAAGACAAATGTTAGTTGGAATTAACTTTTGAAATTCTAAATGTCGAAATGGTAGATTTTAAAA-CTCATCCATTTCTACTAGTTTTCTTGCTTTATGGTGTGATGTCTGCATGTCACAAGTGGATGGCAGGGTTTCTAAGG-CTTGTTTTTCCTTTGTTGGTATTTTCCTAATTGCCTAGGACATATCACATAAAATTACTTAACAAGTAGTGGAAAAGAATGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110083 249 + 81552678 TTGGGTGTTGGCTGCAATGACATCTTTAAGACAAATGTTAATTGGAATTAACTTTTGAAATTCTAAATGTCAAAATGGTGGATTTTAAAA-CTCATTCATTTCTACTAGTTTTCTTGCTTTATGGTGTGATGTCTGCATGTCACAAGTGGATGGCAGGGTTTCTAAGG-TTTGTTTTTCCTTTGTTGGTATTTTCCTAATTGCCTAGGACATATCACGTAAAATTACTTAACAAGTAGTGGAAAAGAATGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440013 249 + 108979918 TCGGGTGTTGGCTGCAATGACATATCTAAGACAAATGTTATTTGGAATTAACTTTTGAAATTCTAAATGTCGAAACGGTAGATTTTAAAA-CTCATTCATTTCTACTAGTTCTCTTGCTTTATGGTGTGATGTCTGCATGTCACAAATGGATGGCAGGGTTTCTAAGG-CTTGCTTTTCCTTTGTTGGTATTTTCCTAATTGCTTAGGACATATCACATAAAATTACTTAACAAGTAGTGGAAAAGAATGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412455 249 - 111193037 TCGGGTGTTGGCTGCAATGACATATCTAAGACAAATGTTATTTGGAATTAACTTTTGAAATTCTAAATGTCAAAACGGTAGATTTTAAAA-CTCATTCATTTCTACTAGTTCTCTTGCTTTATGGTGTGATGTCTGCATGTCACAAATGGATGGCAGGGTTTCTAAGG-CTTGCTTTTCCTTTGTTGGTATTTTCCTAATTGCTTAGGACATATCACATAAAATTACTTAACAAGTAGTGGAAAAGAATGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1440572 249 + 3644372 TCGGGTGTTGGCTGCAATGACATATCTAAGACAAATGTTATTTGGAATTAACTTTTGAAATTCTAAATGTCGAAACGGTAGATTTTAAAA-CTCATTCATTTCTACTAGTTCTCTTGCTTTATGGTGTGATGTCTGCATGTCACAAATGGATGGCATGGTTTCTAAGT-CTTGCTTTTCCTTTGTTGGTATTTTCCTAATTGCTTAGGACATATCACATAAAATTACTTAACAAGTAGTGGAAAAGAATGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1394983 249 - 10304083 TCGGGTGTTGGCTGCAATGACATATCTAAGACAAATGTTATTTGGAATTAACTTTTGAAATTCTAAATGTCGAAATGGTAGATTTTAAAA-CTCATTCATTTCTACTAGTTCTCTTGCTTTACGGTGTGATGCCTGCATGTCACAGATGGATGACAGGGTTTCTAAGG-CTTGTTTTTCCTTTGTTGGTATTTTCCTAATTGCTTAGGACATATCACATAAAATTACTTAACAAGTAGTGGAAAAGAATGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467360 249 - 107702431 TCGGGTGTTGGCTGCAATGACATCTTTAAGACAAATGTTATTTGGAATTAACTTTTGAAATTCTAAATGTCGAAATGGTAGATTTTAAAG-CTCATTCATTTCTACTAGTTCTCTTGCTTTATGGTGTGATGTCTGCATGTCACAGATGGATGACAGGGTTTCTAAGG-CTTGCTTTTCCTTTGTTGGCATTTTCCTAATTGCTTAGGACATATCACATAAAATTACTTAACAAGTAGTGGGAAAGAATGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955080 249 - 2200435 TCGGGTGTGGGCTGCAATGACATATCTAAGACAAATGTTATTTGGAATTAACTTTTGAAATTCTAAATGTCGAAACGGTAGATTTTAAAA-CTCATTCATTTCTACTAGTTCTCTTGCTTTACGGTGTGATGCCTGCATGTCACAGATGGATGACAGGGTTTCTAAGG-CTTGCTTTTCCTTTGTTGGTATTTTCCTAATTGCTTAGGACATATCACATAAAATTACTTAACAAGTAGTGGAAAAGAATGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1390845 249 - 13651311 TTGGGTGTTGGCTGCAATGACGTCTTTAAGACAAATGTTATTTGGAATTAACTTTTGAAATTCTAAATGTCGAAACAGTAGATTTTAAAA-CTCATTCATTTCTACTAGTTCTCTTGCTTTATGGTGTGATGTCTGCATGTCACAAATGGATGGCAGGGTTTCTAAGG-CTTGCTTTTCCTTTGTTGGTATTTTCCTAATTGCCTAGGACATATCACATAAAATTACTTAACAAGTAGTGGAAAAGAATGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1385964 248 - 108792865 TTGGGTGTTGGCTGAAATGACGTCTTTAAGACAAATGTTACCTGGAATTAACTTTTGAAATTCTAAATGTATAAATGGTGGATTTTTAAACCTCATTCGTTTCTACTAGTTTTCTTGCTTTATGGTGTGATATACACATGTCACAAATGGATGAT-GGGTTTCTAAGG-CTGGTTTTCCCTTTGTTGGTATTTTCCTAATTGCCTAAGACATATCACATAAATTTGCTTAATAAGTAGTGGGAAA-AATGA i calJac3.chr14 C 0 I 2 s saiBol1.JH378218 1231237 244 - 7082604 TTGAGTGTTGGCTGCAATGACATCTTTTAGACAACTGTTACTTGGAATTAACTTTTGAAATTCTAAATGTCTACATGGTGGATTTTAAAA----ATTCATTTCTACTAGTTTTCTTGCTTTATGGTGTGATATACACAGGTCACAAATGGATGAT-GGGTTTCTAAGG-TTGGTTTTTCCTTTGTTGGCATTTTCCTAATTGCCTAAGACATATCACATAAAATTACTTAATAAGTAGTGGGAAA-AATGA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1319823 247 + 1864846 TTGGGTGTTGGCTGCAATGGCATCTTTAAGACAAATGTTACTTGGAATTAACTTTTGAAATTCTAAATGTATAAATGGTGGATTTTTAAAACTCATTCATCTCTACTGGTTTTCTTGCTTTACGGTGTAATTTACACATGTCATAAATGGATGAT-GGGTTTCTAAGG-TTGGTTTTTCCTTTGTTGGTATTTTCCTAATTGCCTAAGACATATCACATAAA-TTACTCAATAAGTAGTGGGAAA-AATGA i cebCap1.NW_016107827v1 I 831 C 0 e aotNan1.NW_018513311v1 111429 2007 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=24843.000000 s hg38.chr2_KI270774v1_alt 123378 3 + 223625 TTT s panTro5.chr2A 1412430 3 + 111504155 TTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361193 3 + 114371477 TTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386737 3 + 1464242 TTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110332 3 + 81552678 TTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440262 3 + 108979918 TTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412704 3 - 111193037 TTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1440821 3 + 3644372 TTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395232 3 - 10304083 TTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467609 3 - 107702431 TTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955329 3 - 2200435 TTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391094 3 - 13651311 TTT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231481 3 - 7082604 TTT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1320070 3 + 1864846 TTT i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 111429 2007 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1386212 2 - 108792865 I a score=17402.000000 s hg38.chr2_KI270774v1_alt 123381 2 + 223625 TT s panTro5.chr2A 1412433 2 + 111504155 TT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361196 2 + 114371477 TT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386740 2 + 1464242 TT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110335 2 + 81552678 TT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440265 2 + 108979918 TT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412707 2 - 111193037 TT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1440824 2 + 3644372 TT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395235 2 - 10304083 TT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467612 2 - 107702431 TT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955332 2 - 2200435 TT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391097 2 - 13651311 TC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386214 2 - 108792865 TT i calJac3.chr14 I 2 C 0 s saiBol1.JH378218 1231484 2 - 7082604 TT i saiBol1.JH378218 C 0 I 2 s cebCap1.NW_016107827v1 1320073 2 + 1864846 TT i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 111429 2007 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=20814.000000 s hg38.chr2_KI270774v1_alt 123383 3 + 223625 CTT s panTro5.chr2A 1412435 3 + 111504155 CTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361198 3 + 114371477 CTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386742 3 + 1464242 CTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110337 3 + 81552678 CTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440267 3 + 108979918 CTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412709 3 - 111193037 CTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1440826 3 + 3644372 CTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395237 3 - 10304083 CTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467614 3 - 107702431 CTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955334 3 - 2200435 CTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391099 3 - 13651311 CTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386216 3 - 108792865 TCT i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1320075 2 + 1864846 -TT i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 111429 2007 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1231486 2 - 7082604 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=167832.000000 s hg38.chr2_KI270774v1_alt 123386 21 + 223625 TCACCATTTCACCTGGACATT s panTro5.chr2A 1412438 21 + 111504155 TCACCATTTCACCTGGACTTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361201 21 + 114371477 TCACCATTTCACCTGGACTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386745 21 + 1464242 TCACCATTTCACCTGGACTTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110340 21 + 81552678 TTGCCATTTCACCTGGACTTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440270 21 + 108979918 TTGCCATTTCACCTGGACTTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412712 21 - 111193037 TTGCCATTTCACCTGGACTTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1440829 21 + 3644372 TTGCCATTTCACCTGGACTTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395240 21 - 10304083 TTGCTGTTTCACCTGGACTTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467617 21 - 107702431 TTGCCGTTTTACCTGGACTTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955337 21 - 2200435 TTGCTGTTTCACCTGGACTTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391102 21 - 13651311 TTGCCATTTCACCTGGACTTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386219 21 - 108792865 TCACCATTTCACTGGGACTTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231488 21 - 7082604 TCACCATTTCACCGGGATTTT i saiBol1.JH378218 I 2 C 0 s cebCap1.NW_016107827v1 1320077 21 + 1864846 TCTCCATTTCACCGGGATTTT i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 111429 2007 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=352031.000000 s hg38.chr2_KI270774v1_alt 123407 48 + 223625 TTGTTTGTATGGTGTAGTCGGTGCCGCAGGAGCTACCTTGTTGAAAGA s panTro5.chr2A 1412459 48 + 111504155 TTGTTTGTATGGTGTAGTGGGTGCTGCAGGAGCTACCTTGTTGAAAGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361222 48 + 114371477 TTGTTTGTATGGTGTAGTCGGTGCTGCAGGAGCTACCTTGTTGAAAGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386766 48 + 1464242 TTGTTTGTATGGTGTAGTCGGTGCCGCAGGAGCTACCTTGTTGAAAGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110361 47 + 81552678 TTGTTTGTATGGTGTAGTCGGTGCTGCAGAAGCT-CCTTGTTGAAAGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440291 48 + 108979918 TTGTTTGTATGGTGTAGTCGGTGCTGCAGGAACTACCTTGTTGAAAGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412733 48 - 111193037 TTGTTTGTATGGTGTAGTCGGTGCTGCAGGAACTACCTTGTTGAAAGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1440850 48 + 3644372 TTGTTTGTATGGTGTAGTCGGTGCTGCAGGAACTACCTTGTTGAAAGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395261 48 - 10304083 TTGTTTGTATGGTGTAGTTGGTGCTGCAGAAGCTACTTTGTTGAAAGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467638 48 - 107702431 TTGTTTGTATGGTGTAGTCGGTGCTGCAGAAGCTACTTTGTTGTAAGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955358 48 - 2200435 TTGTTTGTATGGTGTAGTTGGTGCTGCAGAAGCTACTTTGTTGAAAGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391123 48 - 13651311 TTGTTTGTATGGTGTAGTCGGTGCTGCAGAAGCTACCTTGTTGAAAGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386240 48 - 108792865 TTGTTTGTTTGATGTGGTCAGTGCCGCAGGAGCTACCACGTCGGAAGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231509 48 - 7082604 TTGTTTGTTTGATGTGGTCAGTGCCGCAGGAGCTATCATGTTGGAAGA i saiBol1.JH378218 C 0 T 60 e aotNan1.NW_018513311v1 111429 2007 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=249796.000000 s hg38.chr2_KI270774v1_alt 123455 45 + 223625 GAAGGGGGCAGGCTGCTTCTCCTTTGTGTGGTGTAGCTAATGCCA s panTro5.chr2A 1412507 45 + 111504155 GAAGGGGGCAGGCTGCTTCTCGTTTGTGTGGTGTAGCTAATGCCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361270 45 + 114371477 GAAGGGGGCAGGCTGCTTCTCGTTTGTGTGGTGTAGCTAATGCCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386814 44 + 1464242 GAA-GGGGCAGGCTGCTTCTCGTTTGTGTGGTGTAGCTAATGCCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110408 45 + 81552678 GAAGGGGGCAGGCTGCTTCTCGTTTGTGTGAAGTAGCTAATGCCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440339 45 + 108979918 GGAGGGGGCAGGTTGCTTCTCGTTTGTGTGGTGTAGCTAATGCCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412781 45 - 111193037 GGAGGGGGCAGGTTGCTTCTCGTTTGTGTGGTGTAGCTAATGCCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1440898 45 + 3644372 GGAGGGGGCAGGTTGCTTCTCGTTTGTGTGGTGTAGCTAATGCCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395309 45 - 10304083 GGAGGGGGCAGGTTGCTTCTCGTTTGTGTGGTGTAGCTAATGCCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467686 45 - 107702431 GGAAGGGGCAGGTTGCTTCTCGTTTGTGTGGTGTAGCTAATGCCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955406 45 - 2200435 GGAGGGGGCAGGTTGCTTCTCGTTTGTGTGGTGTAGCTAATGCCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391171 44 - 13651311 GGA-GGGGCAGGCTGCTTCTCGTTTGTGTGGTGCAGCTAATGCCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386288 14 - 108792865 GACTGGGGCAGGCT------------------------------- i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 111429 2007 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1231557 60 - 7082604 T e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=56569.000000 s hg38.chr2_KI270774v1_alt 123500 11 + 223625 CACCTGTACTT s panTro5.chr2A 1412552 11 + 111504155 CACCTGGACTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361315 11 + 114371477 CACCTGGACTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386858 11 + 1464242 CACCTGGACTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110453 11 + 81552678 CACCTGGACTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440384 11 + 108979918 CACCCGGACGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412826 11 - 111193037 CACCTGGACGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1440943 11 + 3644372 CACCCGGACGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395354 11 - 10304083 CACCCGGATGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467731 11 - 107702431 CACCCGGACTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955451 11 - 2200435 CACCCGGATGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391215 11 - 13651311 CACCCGGACTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386302 1 - 108792865 ----------C i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231497 11 - 7082604 CACCGGGATTT i saiBol1.JH378218 T 60 C 0 e aotNan1.NW_018513311v1 111429 2007 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=279665.000000 s hg38.chr2_KI270774v1_alt 123511 34 + 223625 CTTGTTTGTATGAAGTGGTCAGTGCCACAGGAGC s panTro5.chr2A 1412563 34 + 111504155 CTTGTTTGTACGATGTGGTCAGTGCCACAGGAGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361326 34 + 114371477 CTTGTTTGTACGATGTGGTCAGTGCCACAGGAGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386869 34 + 1464242 CTTGTTTGTATGATGTGGTCAGTGCCACAGGAGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110464 34 + 81552678 CTTGTTTGTATGATGTGGTCAGTGCCACAGGAAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440395 34 + 108979918 CTTGTTTGTACGATGTGGTCAATGCCACACCACC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412837 34 - 111193037 CTTGTTTGTACGATGTGGTCAATGCCACACCACC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1440954 34 + 3644372 CTTGTTTGTACGATGTGGTCAATGCCACACCACC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395365 34 - 10304083 CTTGTTTGTACGATGTGGTCAGTGCCACAGGAGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467742 34 - 107702431 CTTGCTTGTACGATGTGTTCAGTGCCACAGGAGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955462 34 - 2200435 CTTGTTTGTACGATGTGGTCAGTGCCACAGGAGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391226 34 - 13651311 CTTGTTTGTATGATATGGTCAGTGCCACAGGAGC i colAng1.NW_012118821v1 C 0 I 66 s calJac3.chr14 1386303 34 - 108792865 CTTGTTTGTATAATGTGGTCAGTGCCACAGGAGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231508 34 - 7082604 TTTGTTTGTTTGATGTGGTCAGTGCCGCAGGAGC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 113436 34 + 287728 CTTGTTTGTACAATGTGGTCAGTGACACAGTAGC i aotNan1.NW_018513311v1 I 2007 C 0 e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=224948.000000 s hg38.chr2_KI270774v1_alt 123545 29 + 223625 TACCACTTTAGAAGGGAATGGAGCAGGCT s panTro5.chr2A 1412597 29 + 111504155 TACCACTTTAGAAGGGAATGGAGCAGGCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361360 29 + 114371477 TACCACTTTAGAAGGGAATGGAGCAGGCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386903 29 + 1464242 TACCACTTTAGAAGGGAATGGAGCAGGCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110498 29 + 81552678 TACCATTTTGGAAGGGAATGGAGCAGGCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440429 29 + 108979918 TACCATGTTGGAAGGGAATGGGGCGGGTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412871 29 - 111193037 TACCATGTTGGAAGGGAATGGGGCGGGTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1440988 29 + 3644372 TACCATGTTGGAAGGGAATGGGGCGGGTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395399 29 - 10304083 TACCATGTTGGAAGGGAACGGGGCAGGCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467776 29 - 107702431 TACCATATTGGAAGGGAATGGGGCAGGCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955496 29 - 2200435 TACCATGTTGGAAGGGAATGGGGCAGGCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391326 28 - 13651311 -CACATGTTGGAAGGGAATGGGGCAGGCT i colAng1.NW_012118821v1 I 66 C 0 s calJac3.chr14 1386337 29 - 108792865 TACTACGTCGGAAGGGACTGGGGCAGGCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231542 29 - 7082604 TATCATGTTGGAAGAAAATGGGGCAGGCT i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 113470 29 + 287728 TGCCACGTTGGAAGAGAATGGGGCAGGCT i aotNan1.NW_018513311v1 C 0 I 39 e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=157028.000000 s hg38.chr2_KI270774v1_alt 123574 31 + 223625 GTTTCTTGTTTATATGGTGTAGTCAGTGCCG s panTro5.chr2A 1412626 31 + 111504155 GCTTCTTGTTTATATGGTGTAGTCAGTGCCG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361389 31 + 114371477 GCTTCTTGTTTATATGGTGTAGTCAGTGCCG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386932 31 + 1464242 GCTTCTTGTTTATATGGTGTAGTCAGTGCCG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110527 31 + 81552678 CCTTCTTGTTTATATGGTGTAGTCATTGCCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440458 31 + 108979918 CCTTCTTGTTTGTATGATCTACTCACTGCCG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412900 31 - 111193037 CCTTCTTGTTTGTATGATCTACTCACTGCCG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441017 22 + 3644372 CCTTCTTGTTTGTATGATCTAC--------- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395428 31 - 10304083 CCTTCTTGTTTGCACGGTGTAGTCCGTGCCG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467805 31 - 107702431 GCTTCTTGTTTTTGTGGTGTAGTCAGTGCCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955525 31 - 2200435 CCTTCTTGTTTGCATGGTGTAGTCCGTGCCG i manLeu1.NW_012103754v1 C 0 T 92 s colAng1.NW_012118821v1 1391354 31 - 13651311 CTTTCTTGTTTGCATGGTGTAGTCTGTGCCG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386366 27 - 108792865 C---CTTGTTTGTATAA-GTGGTCAGTGCCG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231571 31 - 7082604 CCTTCTTGTTTGTATAGTGTGGTGAGTGCTG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=30750.000000 s hg38.chr2_KI270774v1_alt 123605 7 + 223625 CAGGAGG s panTro5.chr2A 1412657 7 + 111504155 CAGGAGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361420 7 + 114371477 CAGGAGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386963 7 + 1464242 CAGGAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110558 7 + 81552678 CAGGAGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440489 7 + 108979918 CAGGATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412931 7 - 111193037 CAGGAAC i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1395459 7 - 10304083 CAGGATG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467836 7 - 107702431 CAGGAGG i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1391385 7 - 13651311 CAGGATG i colAng1.NW_012118821v1 C 0 T 132 s calJac3.chr14 1386393 7 - 108792865 TAGGAGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231602 7 - 7082604 CAGAAGG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e manLeu1.NW_012103754v1 955556 92 - 2200435 T e macNem1.NW_012011978v1 1441039 0 + 3644372 C a score=14960.000000 s hg38.chr2_KI270774v1_alt 123612 3 + 223625 CAC s panTro5.chr2A 1412664 3 + 111504155 CAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361427 3 + 114371477 CAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386970 3 + 1464242 CAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110565 3 + 81552678 CAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440496 3 + 108979918 TAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412938 3 - 111193037 TAC i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1395466 3 - 10304083 TAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467843 3 - 107702431 CAC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1391260 3 - 13651311 CAC i colAng1.NW_012118821v1 T 132 C 0 s calJac3.chr14 1386400 3 - 108792865 TAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231609 3 - 7082604 CAC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e manLeu1.NW_012103754v1 955556 92 - 2200435 T e macNem1.NW_012011978v1 1441039 0 + 3644372 C a score=1643.000000 s hg38.chr2_KI270774v1_alt 123615 1 + 223625 T s panTro5.chr2A 1412667 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361430 1 + 114371477 T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386973 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110568 1 + 81552678 T i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440499 1 + 108979918 C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412941 1 - 111193037 C i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1395469 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467846 1 - 107702431 T i chlSab2.chr14 C 0 C 0 s calJac3.chr14 1386403 1 - 108792865 C i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231612 1 - 7082604 T i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e colAng1.NW_012118821v1 1391263 0 - 13651311 C e manLeu1.NW_012103754v1 955556 92 - 2200435 T e macNem1.NW_012011978v1 1441039 0 + 3644372 C a score=9328.000000 s hg38.chr2_KI270774v1_alt 123616 2 + 223625 AT s panTro5.chr2A 1412668 2 + 111504155 AT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361431 2 + 114371477 AT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386974 2 + 1464242 AT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110569 2 + 81552678 AT i nomLeu3.chr19 C 0 T 51 s rheMac8.chr13 1440500 2 + 108979918 AT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412942 2 - 111193037 AT i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1395470 2 - 10304083 AT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467847 2 - 107702431 AT i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1391263 2 - 13651311 AT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386404 2 - 108792865 AC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231613 2 - 7082604 GT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e manLeu1.NW_012103754v1 955556 92 - 2200435 T e macNem1.NW_012011978v1 1441039 0 + 3644372 C a score=24960.000000 s hg38.chr2_KI270774v1_alt 123618 9 + 223625 GTTGGAAGA s panTro5.chr2A 1412670 9 + 111504155 TTTGGAAGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361433 9 + 114371477 TTTGGAAGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386976 9 + 1464242 GTTGGAAGT i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1440502 9 + 108979918 GTTGTAAGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412944 9 - 111193037 GTTGTAAGC i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1395472 9 - 10304083 ATTGGAAGG i cerAty1.NW_012000820v1 C 0 I 5 s chlSab2.chr14 1467849 9 - 107702431 GTTGGAAGG i chlSab2.chr14 C 0 T 59 s colAng1.NW_012118821v1 1391265 9 - 13651311 GTTGGAAGT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386406 9 - 108792865 ATCAGAAGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231615 9 - 7082604 GTTGGAATA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e manLeu1.NW_012103754v1 955556 92 - 2200435 T e macNem1.NW_012011978v1 1441039 0 + 3644372 C e nomLeu3.chr19 1110571 51 + 81552678 T a score=10923.000000 s hg38.chr2_KI270774v1_alt 123627 4 + 223625 GAAT s panTro5.chr2A 1412679 4 + 111504155 GAAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361442 4 + 114371477 GAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386985 4 + 1464242 GAAT i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1440511 4 + 108979918 GAAT i rheMac8.chr13 C 0 I 1 s macFas5.chr13 1412953 4 - 111193037 GAAT i macFas5.chr13 C 0 I 1 s colAng1.NW_012118821v1 1391274 4 - 13651311 GAGT i colAng1.NW_012118821v1 C 0 I 1 s calJac3.chr14 1386415 4 - 108792865 GACT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231624 4 - 7082604 GAAT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e manLeu1.NW_012103754v1 955556 92 - 2200435 T e chlSab2.chr14 1467858 59 - 107702431 T e cerAty1.NW_012000820v1 1395481 5 - 10304083 I e macNem1.NW_012011978v1 1441039 0 + 3644372 C e nomLeu3.chr19 1110571 51 + 81552678 T a score=5635.000000 s hg38.chr2_KI270774v1_alt 123631 2 + 223625 GG s panTro5.chr2A 1412683 2 + 111504155 GA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361446 2 + 114371477 GA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386989 2 + 1464242 GG i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1440516 2 + 108979918 GA i rheMac8.chr13 I 1 C 0 s macFas5.chr13 1412958 2 - 111193037 GA i macFas5.chr13 I 1 C 0 s cerAty1.NW_012000820v1 1395486 2 - 10304083 GG i cerAty1.NW_012000820v1 I 5 C 0 s colAng1.NW_012118821v1 1391279 2 - 13651311 GA i colAng1.NW_012118821v1 I 1 C 0 s calJac3.chr14 1386419 2 - 108792865 GG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231628 2 - 7082604 GG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e manLeu1.NW_012103754v1 955556 92 - 2200435 T e chlSab2.chr14 1467858 59 - 107702431 T e macNem1.NW_012011978v1 1441039 0 + 3644372 C e nomLeu3.chr19 1110571 51 + 81552678 T a score=5500.000000 s hg38.chr2_KI270774v1_alt 123633 1 + 223625 G s panTro5.chr2A 1412685 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361448 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386991 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110520 1 + 81552678 G i nomLeu3.chr19 T 51 C 0 s rheMac8.chr13 1440518 1 + 108979918 G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412960 1 - 111193037 G i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1395488 1 - 10304083 G i cerAty1.NW_012000820v1 C 0 C 0 s colAng1.NW_012118821v1 1391281 1 - 13651311 G i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386421 1 - 108792865 G i calJac3.chr14 C 0 I 1 s saiBol1.JH378218 1231630 1 - 7082604 G i saiBol1.JH378218 C 0 I 1 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e manLeu1.NW_012103754v1 955556 92 - 2200435 T e chlSab2.chr14 1467858 59 - 107702431 T e macNem1.NW_012011978v1 1441039 0 + 3644372 C a score=53506.000000 s hg38.chr2_KI270774v1_alt 123634 12 + 223625 CAGGCTTCTTCC s panTro5.chr2A 1412686 12 + 111504155 CAGGCTCCTTCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361449 12 + 114371477 CAGGCTCCTTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1386992 12 + 1464242 CAGGCTCATTCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110521 12 + 81552678 CAGGCTCCTTCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440519 12 + 108979918 CAGGCTCCTTCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412961 12 - 111193037 CAGGCTCCTTCC i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1395489 12 - 10304083 CAGGCTGCTTCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467799 12 - 107702431 CAGGCAGCTTCT i chlSab2.chr14 T 59 C 0 s colAng1.NW_012118821v1 1391282 12 - 13651311 CAGGCTCCTTCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386423 9 - 108792865 CAGGCTC---CT i calJac3.chr14 I 1 C 0 s saiBol1.JH378218 1231632 12 - 7082604 CAGGCTCCTTCT i saiBol1.JH378218 I 1 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e manLeu1.NW_012103754v1 955556 92 - 2200435 T e macNem1.NW_012011978v1 1441039 0 + 3644372 C a score=56738.000000 s hg38.chr2_KI270774v1_alt 123646 11 + 223625 TGTTTGTATGA s panTro5.chr2A 1412698 11 + 111504155 TGTTTGTATGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361461 11 + 114371477 TGTTTGTATGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387004 11 + 1464242 TGTTTTTATGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110533 11 + 81552678 TGTTTATATGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440531 11 + 108979918 TGTTTTTATGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412973 11 - 111193037 TGTTTTTATGG i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1395501 11 - 10304083 TGTTTTTGTGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467811 11 - 107702431 TGTTTTTGTGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955464 11 - 2200435 TGTTTGTACGA i manLeu1.NW_012103754v1 T 92 C 0 s colAng1.NW_012118821v1 1391294 11 - 13651311 TGTTTTTATGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386432 11 - 108792865 TGTTTGTATAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231644 11 - 7082604 TGTTTGCATAA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e macNem1.NW_012011978v1 1441039 0 + 3644372 C a score=121636.000000 s hg38.chr2_KI270774v1_alt 123657 24 + 223625 TCTAGTCAGTGCCACAGGACGTAC s panTro5.chr2A 1412709 24 + 111504155 TCTAGTCATTGCCGCGGGAGGTAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361472 24 + 114371477 TCTAGTCATTGCCGCGGGAGGTAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387015 24 + 1464242 TGTAGGCAATGCCGCAGGAGGCAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110544 24 + 81552678 TGTAGTCATTGCCACAGGAGGCAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440542 24 + 108979918 TGTAGTCAGTGCCACAGGATGTAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412984 24 - 111193037 TGTAGTCAGTGCCACAGGATGTAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441039 19 + 3644372 -----TCACTGCCGCAGGAACTAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395512 24 - 10304083 TGTAGTCAGTGCCGCAGGAGGCAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467822 24 - 107702431 TGTAGTCAGTGCCACAGGAGGCAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955475 24 - 2200435 TGTGGTCAGTGCCACAGGAGCTAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391305 24 - 13651311 TGTAGTCAGTGCCACAGGAGCCAC i colAng1.NW_012118821v1 C 0 T 66 s saiBol1.JH378218 1231655 24 - 7082604 TGTGGTCAGTGCTGCAGGAGCTAC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1386443 0 - 108792865 C a score=-3417.000000 s hg38.chr2_KI270774v1_alt 123681 1 + 223625 -T s panTro5.chr2A 1412733 1 + 111504155 -T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361496 1 + 114371477 -T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387039 1 + 1464242 -T i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110568 1 + 81552678 -T i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440566 1 + 108979918 -C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413008 1 - 111193037 -C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441058 1 + 3644372 -C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395536 1 - 10304083 -T i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467846 1 - 107702431 -T i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955499 1 - 2200435 -C i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1231679 1 - 7082604 A- i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1386443 0 - 108792865 C e colAng1.NW_012118821v1 1391329 66 - 13651311 T a score=51905.000000 s hg38.chr2_KI270774v1_alt 123682 11 + 223625 ATGTTGTAAGT s panTro5.chr2A 1412734 11 + 111504155 ATGTTGTAAGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361497 11 + 114371477 ATGTTGTAAGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387040 11 + 1464242 ACGTTGGAAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110569 11 + 81552678 ATGTTGGAAGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440567 11 + 108979918 ATGTTGTAAGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413009 11 - 111193037 ATGTTGTAAGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441059 11 + 3644372 ATGTTGTAAGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395537 10 - 10304083 ATGTTGGAGG- i cerAty1.NW_012000820v1 C 0 T 66 s chlSab2.chr14 1467847 11 - 107702431 ATGTTGGAAGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955500 11 - 2200435 ATGTTGGAAGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391263 11 - 13651311 ATGTTGGAAGT i colAng1.NW_012118821v1 T 66 C 0 s saiBol1.JH378218 1231680 11 - 7082604 GTGTTGGAAGA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1386443 0 - 108792865 C a score=28184.000000 s hg38.chr2_KI270774v1_alt 123693 5 + 223625 GAATG s panTro5.chr2A 1412745 5 + 111504155 GAATG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361508 5 + 114371477 GAATG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387051 5 + 1464242 GAACA i gorGor5.CYUI01015607v1 C 0 I 330 s nomLeu3.chr19 1110580 5 + 81552678 GAATA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440578 5 + 108979918 GAATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413020 5 - 111193037 GAATG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441070 5 + 3644372 GAATG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395481 5 - 10304083 GAATG i cerAty1.NW_012000820v1 T 66 C 0 s chlSab2.chr14 1467858 5 - 107702431 AAATG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955511 5 - 2200435 GAATG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391274 5 - 13651311 GAGTG i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231691 5 - 7082604 AAATG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1386443 0 - 108792865 C a score=49968.000000 s hg38.chr2_KI270774v1_alt 123698 8 + 223625 GAGCAGGC s panTro5.chr2A 1412750 8 + 111504155 GAGCAGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361513 8 + 114371477 GAGCAGGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387386 8 + 1464242 GGGCAGGG i gorGor5.CYUI01015607v1 I 330 C 0 s nomLeu3.chr19 1110585 8 + 81552678 GGGCAGGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440583 8 + 108979918 GAGCAGGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413025 8 - 111193037 GAGCAGGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441075 8 + 3644372 GAGCAGGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395486 8 - 10304083 GGGCAGGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467863 8 - 107702431 GAGCAGGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955516 8 - 2200435 GGGCAGGC i manLeu1.NW_012103754v1 C 0 I 67 s colAng1.NW_012118821v1 1391279 8 - 13651311 GAGCAGGC i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231696 8 - 7082604 GGGCAGGC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1386443 0 - 108792865 C a score=27053.000000 s hg38.chr2_KI270774v1_alt 123706 5 + 223625 TCATT s panTro5.chr2A 1412758 5 + 111504155 TCCTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361521 5 + 114371477 TCCTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387394 5 + 1464242 TCCTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110593 5 + 81552678 TCCTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440591 5 + 108979918 TCCTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413033 5 - 111193037 TCCTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441083 5 + 3644372 TTCTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395494 5 - 10304083 TGCTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467871 5 - 107702431 TTCTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955591 5 - 2200435 TGCTT i manLeu1.NW_012103754v1 I 67 C 0 s colAng1.NW_012118821v1 1391287 5 - 13651311 TCCTT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231704 5 - 7082604 TCCTT i saiBol1.JH378218 C 0 T 134 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1386443 0 - 108792865 C a score=199703.000000 s hg38.chr2_KI270774v1_alt 123711 33 + 223625 CCTGTTTTTATGGTGTAGTCATTGCCGCAGGAG s panTro5.chr2A 1412763 33 + 111504155 CCTGTTTTTATGGTGTAGTCATTGCCGCAGGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361526 33 + 114371477 CCTGTTTTTATGGTGTAGTCATTGCCGCAGGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387399 33 + 1464242 CTTGTTTCCATGGTGTAGTCAGTGCCGCAGGAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110598 33 + 81552678 CCTGTTTGTATGGTGTAGTCAGTGCCGCAGGAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440596 33 + 108979918 CCTGTTTTTATGGTGTAGTCACTGCCGCAGGAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413038 33 - 111193037 CCTGGTTTTATGGTGTAGTCACTGCCGCAGGAA i macFas5.chr13 C 0 T 237 s macNem1.NW_012011978v1 1441088 33 + 3644372 CCTGTTTTTATGGTGTAGTCAGTCCCGCAGGAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395499 33 - 10304083 CTTGTTTTTGTGGTGTAGTCAGTGCCGCAGGAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467876 33 - 107702431 CCTGTTTGTATGGTGTAGTCAGTCCCGCAGGAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955596 33 - 2200435 CTTGTTTTTGTGGTGTAGTCAGTGCCGCAGGAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391292 33 - 13651311 CCTGTTTTTATGGTGTAGTCAGTGCCACAGGAG i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231575 33 - 7082604 CTTGTTTGTATAGTGTGGTGAGTGCTGCAGAAG i saiBol1.JH378218 T 134 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1386443 0 - 108792865 C a score=15088.000000 s hg38.chr2_KI270774v1_alt 123744 4 + 223625 GCAC s panTro5.chr2A 1412796 4 + 111504155 GTAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361559 4 + 114371477 GTAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387432 4 + 1464242 GCAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110631 4 + 81552678 CCAC i nomLeu3.chr19 C 0 C 0 s macNem1.NW_012011978v1 1441121 4 + 3644372 GCAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395532 4 - 10304083 GCAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467909 4 - 107702431 GCAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955629 4 - 2200435 GCAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391325 4 - 13651311 CCAC i colAng1.NW_012118821v1 C 0 T 106 s saiBol1.JH378218 1231608 4 - 7082604 GCAC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1386443 0 - 108792865 C e macFas5.chr13 1413071 237 - 111193037 T e rheMac8.chr13 1440629 0 + 108979918 C a score=5994.000000 s hg38.chr2_KI270774v1_alt 123748 2 + 223625 TA s panTro5.chr2A 1412800 2 + 111504155 TA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361563 2 + 114371477 TA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387436 2 + 1464242 TA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110635 2 + 81552678 CA i nomLeu3.chr19 C 0 C 0 s macNem1.NW_012011978v1 1441125 2 + 3644372 TA i macNem1.NW_012011978v1 C 0 T 119 s cerAty1.NW_012000820v1 1395536 2 - 10304083 TA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467913 2 - 107702431 TA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955633 2 - 2200435 TA i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1231612 2 - 7082604 TG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1386443 0 - 108792865 C e colAng1.NW_012118821v1 1391329 106 - 13651311 T e macFas5.chr13 1413071 237 - 111193037 T e rheMac8.chr13 1440629 0 + 108979918 C a score=16747.000000 s hg38.chr2_KI270774v1_alt 123750 6 + 223625 TGTTGG s panTro5.chr2A 1412802 6 + 111504155 CGTTGG i panTro5.chr2A C 0 I 268 s panPan2.chr2A 1361565 6 + 114371477 CGTTGG i panPan2.chr2A C 0 T 133 s gorGor5.CYUI01015607v1 1387438 6 + 1464242 TTTTGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110637 6 + 81552678 TGTTGG i nomLeu3.chr19 C 0 C 0 s cerAty1.NW_012000820v1 1395538 6 - 10304083 TGTTGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467915 6 - 107702431 CGTTGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955635 6 - 2200435 TGTTGG i manLeu1.NW_012103754v1 C 0 T 177 s saiBol1.JH378218 1231614 6 - 7082604 TGTTGG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1386443 0 - 108792865 C e colAng1.NW_012118821v1 1391329 106 - 13651311 T e macNem1.NW_012011978v1 1441127 119 + 3644372 T e macFas5.chr13 1413071 237 - 111193037 T e rheMac8.chr13 1440629 0 + 108979918 C a score=3427.000000 s hg38.chr2_KI270774v1_alt 123756 3 + 223625 AGG s panTro5.chr2A 1413076 3 + 111504155 AAG i panTro5.chr2A I 268 C 0 s panPan2.chr2A 1361438 3 + 114371477 AAG i panPan2.chr2A T 133 C 0 s gorGor5.CYUI01015607v1 1387444 3 + 1464242 AAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110643 3 + 81552678 AAG i nomLeu3.chr19 C 0 C 0 s cerAty1.NW_012000820v1 1395544 3 - 10304083 AGG i cerAty1.NW_012000820v1 C 0 C 0 s saiBol1.JH378218 1231620 3 - 7082604 AAT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1386443 0 - 108792865 C e colAng1.NW_012118821v1 1391329 106 - 13651311 T e manLeu1.NW_012103754v1 955641 177 - 2200435 T e chlSab2.chr14 1467921 0 - 107702431 C e macNem1.NW_012011978v1 1441127 119 + 3644372 T e macFas5.chr13 1413071 237 - 111193037 T e rheMac8.chr13 1440629 0 + 108979918 C a score=6350.000000 s hg38.chr2_KI270774v1_alt 123759 5 + 223625 AGAAT s panTro5.chr2A 1413079 5 + 111504155 AGAAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361441 5 + 114371477 AGAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387447 5 + 1464242 AGAAT i gorGor5.CYUI01015607v1 C 0 T 396 s nomLeu3.chr19 1110646 5 + 81552678 GGAAT i nomLeu3.chr19 C 0 I 1 s saiBol1.JH378218 1231623 5 - 7082604 AGAAT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1386443 0 - 108792865 C e colAng1.NW_012118821v1 1391329 106 - 13651311 T e manLeu1.NW_012103754v1 955641 177 - 2200435 T e chlSab2.chr14 1467921 0 - 107702431 C e cerAty1.NW_012000820v1 1395547 0 - 10304083 C e macNem1.NW_012011978v1 1441127 119 + 3644372 T e macFas5.chr13 1413071 237 - 111193037 T e rheMac8.chr13 1440629 0 + 108979918 C a score=14150.000000 s hg38.chr2_KI270774v1_alt 123764 10 + 223625 -GGGCAGGCTC s panTro5.chr2A 1413084 10 + 111504155 -GGGCAGGCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361446 10 + 114371477 -GAGCAGGCTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387056 10 + 1464242 -GGGCAGGGTC i gorGor5.CYUI01015607v1 T 396 C 0 s nomLeu3.chr19 1110652 10 + 81552678 -GGCCAGACTC i nomLeu3.chr19 I 1 C 0 s macNem1.NW_012011978v1 1441008 10 + 3644372 -GGGCGGGTTC i macNem1.NW_012011978v1 T 119 C 0 s saiBol1.JH378218 1231628 11 - 7082604 GGGACAGGCTC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1386443 0 - 108792865 C e colAng1.NW_012118821v1 1391329 106 - 13651311 T e manLeu1.NW_012103754v1 955641 177 - 2200435 T e chlSab2.chr14 1467921 0 - 107702431 C e cerAty1.NW_012000820v1 1395547 0 - 10304083 C e macFas5.chr13 1413071 237 - 111193037 T e rheMac8.chr13 1440629 0 + 108979918 C a score=13219.000000 s hg38.chr2_KI270774v1_alt 123774 5 + 223625 CTTCC s panTro5.chr2A 1413094 5 + 111504155 CTTCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361456 5 + 114371477 CTTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387066 5 + 1464242 CTTCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110662 5 + 81552678 CTTCT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1412834 5 - 111193037 CGTCT i macFas5.chr13 T 237 C 0 s macNem1.NW_012011978v1 1441018 5 + 3644372 CTTCT i macNem1.NW_012011978v1 C 0 C 0 s colAng1.NW_012118821v1 1391223 5 - 13651311 CTTCT i colAng1.NW_012118821v1 T 106 C 0 s saiBol1.JH378218 1231639 5 - 7082604 CTTCT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1386443 0 - 108792865 C e manLeu1.NW_012103754v1 955641 177 - 2200435 T e chlSab2.chr14 1467921 0 - 107702431 C e cerAty1.NW_012000820v1 1395547 0 - 10304083 C e rheMac8.chr13 1440629 0 + 108979918 C a score=90790.000000 s hg38.chr2_KI270774v1_alt 123779 31 + 223625 TGTTTGTATGATCTAGTCAGTGCCGCAGGAC s panTro5.chr2A 1413099 31 + 111504155 TGTTTGTATGATCTAGTCAGTGCTGCAGGAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361461 31 + 114371477 TGTTTGTATGATCTAGTCATTGCCGCGGGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387071 31 + 1464242 TGTTTGTATGATCTAGTCATTGCCGCAGGAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110667 31 + 81552678 TGTTGGTATGGTGTGGCCAATGCTGCAGGAC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1412839 31 - 111193037 TGTTTGTACGATGTGGTCAATGCCACACCAC i macFas5.chr13 C 0 I 201 s macNem1.NW_012011978v1 1441023 31 + 3644372 TGTTTGTATGATCTACTCACTGCCGCAGGAA i macNem1.NW_012011978v1 C 0 C 0 s manLeu1.NW_012103754v1 955464 31 - 2200435 TGTTTGTACGATGTGGTCAGTGCCACAGGAG i manLeu1.NW_012103754v1 T 177 C 0 s colAng1.NW_012118821v1 1391228 31 - 13651311 TGTTTGTATGATATGGTCAGTGCCACAGGAG i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231644 31 - 7082604 TGTTTGCATAATGTGGTCAGTGCTGCAGGAG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1386443 0 - 108792865 C e chlSab2.chr14 1467921 0 - 107702431 C e cerAty1.NW_012000820v1 1395547 0 - 10304083 C e rheMac8.chr13 1440629 0 + 108979918 C a score=27768.000000 s hg38.chr2_KI270774v1_alt 123810 12 + 223625 GTAC-TATGTTGT s panTro5.chr2A 1413130 12 + 111504155 GTAC-TATGTTGT i panTro5.chr2A C 0 T 334 s panPan2.chr2A 1361492 12 + 114371477 GTAC-TATGTTGT i panPan2.chr2A C 0 I 67 s gorGor5.CYUI01015607v1 1387102 12 + 1464242 GTAC-TATGTTGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110698 12 + 81552678 GTACACATGTGG- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440629 12 + 108979918 CTAC-CATGTTGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413071 12 - 111193037 CTAC-CATGTTGT i macFas5.chr13 I 201 C 0 s macNem1.NW_012011978v1 1441054 12 + 3644372 CTAC-CATGTTGT i macNem1.NW_012011978v1 C 0 C 0 s manLeu1.NW_012103754v1 955495 12 - 2200435 CTAC-CATGTTGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391259 11 - 13651311 -CCA-CATGTTGG i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231675 12 - 7082604 CTAC-AGTGTTGG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1386443 0 - 108792865 C e chlSab2.chr14 1467921 0 - 107702431 C e cerAty1.NW_012000820v1 1395547 0 - 10304083 C a score=15407.000000 s hg38.chr2_KI270774v1_alt 123822 4 + 223625 AAGT s panTro5.chr2A 1412808 4 + 111504155 AAGC i panTro5.chr2A T 334 C 0 s panPan2.chr2A 1361571 4 + 114371477 AAGC i panPan2.chr2A I 67 C 0 s gorGor5.CYUI01015607v1 1387114 4 + 1464242 AAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110710 4 + 81552678 AAGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440641 4 + 108979918 AAGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413083 4 - 111193037 AAGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441066 4 + 3644372 AAGC i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1467921 4 - 107702431 AAGG i chlSab2.chr14 C 0 T 67 s manLeu1.NW_012103754v1 955507 4 - 2200435 AAGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391270 4 - 13651311 AAGT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231687 4 - 7082604 AAGA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1386443 0 - 108792865 C e cerAty1.NW_012000820v1 1395547 0 - 10304083 C a score=64522.000000 s hg38.chr2_KI270774v1_alt 123826 16 + 223625 GAATGGAGCAGGCTCA s panTro5.chr2A 1412812 16 + 111504155 GAGTAGGGCAGGGTCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361575 16 + 114371477 GAGTAGGGCAGGGTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387118 16 + 1464242 GAATGGAGCAGGCTCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110714 12 + 81552678 GAATGGGGC----TTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440645 16 + 108979918 GAATGGAGCAGGCTCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413087 16 - 111193037 GAATGGAGCAGGCTCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441070 16 + 3644372 GAATGGAGCAGGCTTC i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1467858 16 - 107702431 AAATGGAGCAGGTTTC i chlSab2.chr14 T 67 C 0 s manLeu1.NW_012103754v1 955511 16 - 2200435 GAATGGGGCAGGCTCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391274 16 - 13651311 GAGTGGAGCAGGCTCC i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231691 16 - 7082604 AAATGGGGCAGGCTCC i saiBol1.JH378218 C 0 T 201 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1386443 0 - 108792865 C e cerAty1.NW_012000820v1 1395547 0 - 10304083 C a score=45824.000000 s hg38.chr2_KI270774v1_alt 123842 11 + 223625 TTCCTGTTTTT s panTro5.chr2A 1412828 11 + 111504155 TTCTTGTTTCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361591 11 + 114371477 TTCTTGTTTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387134 11 + 1464242 TTCCTGTTTTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110726 11 + 81552678 AGTCTGTTTTT i nomLeu3.chr19 C 0 I 1821 s rheMac8.chr13 1440661 11 + 108979918 TTCCTGTTTTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413103 11 - 111193037 TTCCTGTTTTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441086 11 + 3644372 TTCCTGTTTTT i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1467874 11 - 107702431 TTCCTGTTTGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955527 11 - 2200435 TTCTTGTTTGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391290 11 - 13651311 TTCCTGTTTTT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231506 11 - 7082604 TTTTTGTTTGT i saiBol1.JH378218 T 201 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1386443 0 - 108792865 C e cerAty1.NW_012000820v1 1395547 0 - 10304083 C a score=107516.000000 s hg38.chr2_KI270774v1_alt 123853 26 + 223625 ATGGTGTAGTCATTGCCGCAGGAGGT s panTro5.chr2A 1412839 26 + 111504155 ATGGTGTAGTCAGTGCCGCAGGAGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361602 26 + 114371477 ATGGTGTAGTCAGTGCCGCAGGAGGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387145 26 + 1464242 ACGGTGTAGTCAGTGCCGCAGGAGGC i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1440672 26 + 108979918 ATGGTGTAGTCAGTGCCACAGGATGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413114 26 - 111193037 ATGGTGTAGTCAGTGCCACAGGATGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441097 26 + 3644372 ATGGTGTAGTCAGTCCCGCAGGAGGC i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1467885 26 - 107702431 ATGGTGTAGTCAGTCCCGCAGGAGGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955538 26 - 2200435 ATGGTGTAGTCCGTGCCGCAGGATGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391301 26 - 13651311 ATGGTGTAGTCAGTGCCACAGGAGCC i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231517 26 - 7082604 TTGATGTGGTCAGTGCCGCAGGAGCT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1386443 0 - 108792865 C e cerAty1.NW_012000820v1 1395547 0 - 10304083 C e nomLeu3.chr19 1110737 1821 + 81552678 I a score=119515.000000 s hg38.chr2_KI270774v1_alt 123879 27 + 223625 ACTACGTTGGAAGCAAGTAGGGCAGGG s panTro5.chr2A 1412865 27 + 111504155 ACTACGTTGGAAGGGAACAGGGCAGGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361628 27 + 114371477 ACTACGTTGGAAGGGAACAGGGCAGGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387171 27 + 1464242 ACTACGTTGGAAGGGAACAGGGCAGGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112558 27 + 81552678 ACAATGTTGTAAGTGAATGGAGCAGGC i nomLeu3.chr19 I 1821 C 0 s rheMac8.chr13 1440698 27 + 108979918 ACCATGTTGTAAGCGAATGGAGCAGGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413140 27 - 111193037 ACCATGTTGTAAGCGAATGGAGCAGGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441123 27 + 3644372 ACTACGTTGGAAGGGAACGGGGCAGGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395547 13 - 10304083 --------------GAATGGAGCAGGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467911 27 - 107702431 ACTACGTTGGAAGGGAATAGGGCAGGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955564 27 - 2200435 ACCATATTGGAAGGGAATGGGGCAGGC i manLeu1.NW_012103754v1 C 0 T 67 s colAng1.NW_012118821v1 1391327 26 - 13651311 AC-ATGTTGGAAGGGAATGGGGCAGGC i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231543 27 - 7082604 ATCATGTTGGAAGAAAATGGGGCAGGC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1386443 0 - 108792865 C a score=13326.000000 s hg38.chr2_KI270774v1_alt 123906 2 + 223625 TC s panTro5.chr2A 1412892 2 + 111504155 TC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361655 2 + 114371477 TC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387198 2 + 1464242 TC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112585 2 + 81552678 TT i nomLeu3.chr19 C 0 T 2126 s rheMac8.chr13 1440725 2 + 108979918 TC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413167 2 - 111193037 TC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441150 2 + 3644372 TC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395560 2 - 10304083 TC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467938 2 - 107702431 TC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955524 2 - 2200435 TC i manLeu1.NW_012103754v1 T 67 C 0 s colAng1.NW_012118821v1 1391353 2 - 13651311 TC i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231570 2 - 7082604 TC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1386443 0 - 108792865 C a score=4909.000000 s hg38.chr2_KI270774v1_alt 123908 1 + 223625 C s panTro5.chr2A 1412894 1 + 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361657 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387200 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110461 1 + 81552678 C i nomLeu3.chr19 T 2126 C 0 s rheMac8.chr13 1440727 1 + 108979918 C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413169 1 - 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441152 1 + 3644372 C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395562 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467940 1 - 107702431 C i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955526 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391355 1 - 13651311 T i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231572 1 - 7082604 C i saiBol1.JH378218 C 0 T 67 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1386443 0 - 108792865 C a score=53152.000000 s hg38.chr2_KI270774v1_alt 123909 16 + 223625 TTC--------------------------------------------------------------TTGTTTCCATGGT s panTro5.chr2A 1412895 16 + 111504155 TTC--------------------------------------------------------------TTGTTTCCATGGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361658 16 + 114371477 TTC--------------------------------------------------------------TTGTTTCCATGGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387201 78 + 1464242 TTCCTGTTGTATATTAGTCATTGCCGCAGGAGGTACTATGTTGGAGGGAACAGGGCAGGGTCCTTCTGTTTGTATGAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110462 16 + 81552678 TTC--------------------------------------------------------------TTGTTTGTATGAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440728 16 + 108979918 TTC--------------------------------------------------------------CTGTTTTTATGGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413170 16 - 111193037 TTC--------------------------------------------------------------CTGTTTTTATGGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441153 13 + 3644372 TTC--------------------------------------------------------------TTG---GTATGGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395563 16 - 10304083 TTC--------------------------------------------------------------CTGTTTTTATGGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467941 16 - 107702431 TTC--------------------------------------------------------------TTGTTTGTATGGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955527 16 - 2200435 TTC--------------------------------------------------------------TTGTTTGCATGGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391356 16 - 13651311 TTC--------------------------------------------------------------TTGTTTGCATGGT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231506 16 - 7082604 TTT--------------------------------------------------------------TTGTTTGTTTGAT i saiBol1.JH378218 T 67 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1386443 0 - 108792865 C a score=141204.000000 s hg38.chr2_KI270774v1_alt 123925 24 + 223625 GTAGTCAGTGCCGCAGGAGGCACT s panTro5.chr2A 1412911 24 + 111504155 GTAGTCATTGCCGCAGGAGGCACT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361674 24 + 114371477 GTAGTCATTGCCGCAGGAGGCACT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387279 24 + 1464242 CTAGTCATTGCCACAGGAGGCACT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110478 24 + 81552678 GTGGTCAGTGCCACAGGAACTACC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440744 24 + 108979918 GTAGTCAGTCCTGCAGGAGGCACT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413186 24 - 111193037 GTAGTCAGTCCCGCAGGAGGCACT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441166 24 + 3644372 GTGGCCAGTGCTGCAGGACGTACC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395579 24 - 10304083 GTAGTCAGTCCCGCAGGAGGCACT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467957 24 - 107702431 GTAGTCAGTCCTGCAGGAGGCACT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955543 24 - 2200435 GTAGTCCGTGCCGCAGGATGTACC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391372 24 - 13651311 GTAGTCTGTGCCGCAGGATGTACC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386443 24 - 108792865 GTGGTCAGTGCCGTAGGAGCTACC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231522 24 - 7082604 GTGGTCAGTGCCGCAGGAGCTATC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113499 39 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=184628.000000 s hg38.chr2_KI270774v1_alt 123949 23 + 223625 ACGTTGGAAGGGAACAGGGCAGG s panTro5.chr2A 1412935 23 + 111504155 ATGTTGGAAGGGAACAGGGCAGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361698 23 + 114371477 ATGTTGGAAGGGAACAGGGCAGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387303 23 + 1464242 ACGTTGGAAGGGAACAGGGCAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110502 23 + 81552678 ATTTTGGAAGGGAATGGAGCAGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440768 23 + 108979918 ACGTTGGAAGGGAACGGGGCAGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413210 23 - 111193037 ACGTTGGAAGGGAACGGGGCAGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441190 23 + 3644372 ATGTTGGAAGAGAATGGGGCAGG i macNem1.NW_012011978v1 C 0 T 198 s cerAty1.NW_012000820v1 1395603 23 - 10304083 ACGTTGGAAGGGAATAGGGCAGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467981 23 - 107702431 ACATTGGAAGGGAATAGGGCAGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955567 23 - 2200435 ATATTGGAAGGGAATGGGGCAGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391396 23 - 13651311 ATGTTGCAAGAGAATGGGGCAAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386467 23 - 108792865 ACATCAGAAGGGACTGGGGCAGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231546 23 - 7082604 ATGTTGGAAGAAAATGGGGCAGG i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 113538 23 + 287728 ACGTTGGAAGGGAATGGGGCAGG i aotNan1.NW_018513311v1 I 39 C 0 e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=10384.000000 s hg38.chr2_KI270774v1_alt 123972 4 + 223625 GTCC s panTro5.chr2A 1412958 4 + 111504155 GTCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361721 4 + 114371477 GTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387326 4 + 1464242 GTCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110525 4 + 81552678 CTCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440791 4 + 108979918 TTCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413233 4 - 111193037 TTGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441015 4 + 3644372 TTCC i macNem1.NW_012011978v1 T 198 C 0 s cerAty1.NW_012000820v1 1395626 4 - 10304083 GTCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1468004 4 - 107702431 GTCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955590 4 - 2200435 CTGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391419 4 - 13651311 CTCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386490 1 - 108792865 C--- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231569 4 - 7082604 CTCC i saiBol1.JH378218 C 0 T 67 s aotNan1.NW_018513311v1 113561 4 + 287728 CTCC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=55678.000000 s hg38.chr2_KI270774v1_alt 123976 6 + 223625 TTCTTG s panTro5.chr2A 1412962 6 + 111504155 TTCTTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361725 6 + 114371477 TTCTTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387330 6 + 1464242 TTCTTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110529 6 + 81552678 TTCTTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440795 6 + 108979918 TTCTTG i rheMac8.chr13 C 0 T 67 s macFas5.chr13 1413237 6 - 111193037 TTCTTG i macFas5.chr13 C 0 T 201 s macNem1.NW_012011978v1 1441019 6 + 3644372 TTCTTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395630 6 - 10304083 TTCTTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1468008 6 - 107702431 TTCTTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955594 6 - 2200435 TTCTTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391423 6 - 13651311 TTCTTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386491 6 - 108792865 TCCTTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231506 6 - 7082604 TTTTTG i saiBol1.JH378218 T 67 C 0 s aotNan1.NW_018513311v1 113565 6 + 287728 TTCTTG i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=134832.000000 s hg38.chr2_KI270774v1_alt 123982 23 + 223625 TTTGTATGATCTAGTCATTGCCA s panTro5.chr2A 1412968 23 + 111504155 TTTGTATGATCTAGTCATTGCCG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361731 23 + 114371477 TTTGTATGATCTAGTCATTGCCG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387336 23 + 1464242 TTTGTATGATCTAGTCATTGCCG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110535 23 + 81552678 TTTATATGGTGTAGTCATTGCCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440734 23 + 108979918 TTTTTATGGTGTAGTCAGTCCTG i rheMac8.chr13 T 67 C 0 s macFas5.chr13 1413042 23 - 111193037 GTTTTATGGTGTAGTCACTGCCG i macFas5.chr13 T 201 C 0 s macNem1.NW_012011978v1 1441025 23 + 3644372 TTTGTATGATCTACTCACTGCCG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395636 23 - 10304083 TTTGTATGGTGTAGTCAGTGCCG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1468014 23 - 107702431 TTTGTGTGGTGTAGTCAGTCCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955600 23 - 2200435 TTTTTGTGGTGTAGTCAGTGCCG i manLeu1.NW_012103754v1 C 0 T 67 s colAng1.NW_012118821v1 1391429 23 - 13651311 TTTGTATGATCTACTCATTACCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386497 22 - 108792865 TTTGTATAA-GTGGTCAGTGCCG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231512 23 - 7082604 TTTGTTTGATGTGGTCAGTGCCG i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 113571 23 + 287728 TTTGTACAATGTGGTCGGTGACA i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=67440.000000 s hg38.chr2_KI270774v1_alt 124005 11 + 223625 CAGGAGGCACT s panTro5.chr2A 1412991 11 + 111504155 CGGGAGGCACT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361754 11 + 114371477 CGGGAGGCACT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387359 11 + 1464242 CAGGAGGTACT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110558 11 + 81552678 CAGGAGGCACT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440757 11 + 108979918 CAGGAGGCACT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413065 11 - 111193037 CAGGAACTACC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441048 11 + 3644372 CAGGAACTACC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395659 11 - 10304083 CAGGAGCTACC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1468037 11 - 107702431 CAGGAGGCACT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955556 11 - 2200435 CAGGATGTACC i manLeu1.NW_012103754v1 T 67 C 0 s colAng1.NW_012118821v1 1391452 11 - 13651311 CAGGAGCTACC i colAng1.NW_012118821v1 C 0 T 134 s calJac3.chr14 1386519 11 - 108792865 TAGGAGCTACC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231535 11 - 7082604 CAGGAGCTATC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 113594 11 + 287728 CAGTAGCTGCC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=212058.000000 s hg38.chr2_KI270774v1_alt 124016 33 + 223625 ATGTTGGAAGGGAATAGGGCAGGGTCCTTCTTG s panTro5.chr2A 1413002 33 + 111504155 ATGTTGGAAGGGAATAGGGCAGGGTCCTTCTTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361765 33 + 114371477 ATGTTGGAAGGGAATAGGGCAGGGTCCTTCTTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387370 33 + 1464242 ACCTTGGAAGGGAATAGGGCAGGGTCCTTCTTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110569 33 + 81552678 ATGTTGGAAGGGAATAGGGCAGGGTCCTTCCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440768 33 + 108979918 ACGTTGGAAGGGAACGGGGCAGGTTCCTTCTTG i rheMac8.chr13 C 0 T 67 s macFas5.chr13 1413076 33 - 111193037 ATGTTGTAAGCGAATGGAGCAGGCTCCTTCCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441059 33 + 3644372 ATGTTGTAAGCGAATGGAGCAGGCTTCTTCCTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395670 33 - 10304083 ATGTTGGAAGGGAACGGGGCAGGTTCCTTCTTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1468048 33 - 107702431 ACGTTGGAAGGGAATAGGGCAGGGTCCTTCTTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955567 33 - 2200435 ATATTGGAAGGGAATGGGGCAGGCTGCTTCTTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391329 33 - 13651311 ATGTTGGAAGGGAATGGGGCAGGCTCTTTCTTG i colAng1.NW_012118821v1 T 134 C 0 s calJac3.chr14 1386530 1 - 108792865 A-------------------------------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231546 33 - 7082604 ATGTTGGAAGAAAATGGGGCAGGCTCCTTCTTG i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 113605 33 + 287728 ATGTTGGAAGAGAATGGGGCAGGGTCCTTCTTG i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=7098.000000 s hg38.chr2_KI270774v1_alt 124049 1 + 223625 T s panTro5.chr2A 1413035 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361798 1 + 114371477 T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387403 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110602 1 + 81552678 T i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440734 1 + 108979918 T i rheMac8.chr13 T 67 C 0 s macFas5.chr13 1413109 1 - 111193037 T i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441092 1 + 3644372 T i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1468081 1 - 107702431 T i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955600 1 - 2200435 T i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391362 1 - 13651311 T i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231579 1 - 7082604 T i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 113638 1 + 287728 T i aotNan1.NW_018513311v1 C 0 I 2286 e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1386531 0 - 108792865 C e cerAty1.NW_012000820v1 1395703 0 - 10304083 C a score=115310.000000 s hg38.chr2_KI270774v1_alt 124050 22 + 223625 TTCCATGGTGTAGTCAGTGCCA s panTro5.chr2A 1413036 22 + 111504155 TTCCATGGTGTAGTCAGTGCCA i panTro5.chr2A C 0 I 200 s panPan2.chr2A 1361799 22 + 114371477 TTCCATGGTGTAGTCAGTGCCA i panPan2.chr2A C 0 I 200 s gorGor5.CYUI01015607v1 1387404 22 + 1464242 TTCCATGGTGTAGTCAGTGCCG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110603 22 + 81552678 TTGTATGGTGTAGTCAGTGCCG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440735 22 + 108979918 TTTTATGGTGTAGTCAGTCCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413110 22 - 111193037 TTTTATGGTGTAGTCAGTGCCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441093 22 + 3644372 TTTTATGGTGTAGTCAGTCCCG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395703 20 - 10304083 --GTATGGTGTGGCCAGTGCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1468082 22 - 107702431 TTGTGTGGTGTAGTCAGTCCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955601 22 - 2200435 TTTTGTGGTGTAGTCAGTGCCG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391363 22 - 13651311 TTGCATGGTGTAGTCTGTGCCG i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231580 22 - 7082604 TTGTATAGTGTGGTGAGTGCTG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113639 2286 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e calJac3.chr14 1386531 0 - 108792865 C a score=68033.000000 s hg38.chr2_KI270774v1_alt 124072 13 + 223625 CAGGAGGCACTAT s panTro5.chr2A 1413258 13 + 111504155 CAGGAGGCACTAT i panTro5.chr2A I 200 C 0 s panPan2.chr2A 1362021 13 + 114371477 CAGGAGGCACTAT i panPan2.chr2A I 200 C 0 s gorGor5.CYUI01015607v1 1387426 13 + 1464242 CAGGAGGCACTAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110625 13 + 81552678 CAGGAGCCACCAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440757 13 + 108979918 CAGGAGGCACTAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413132 13 - 111193037 CAGGATGTACCAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441115 13 + 3644372 CAGGAGGCACTAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395723 13 - 10304083 CAGGACGTACCAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1468104 13 - 107702431 CAGGAGGCACTAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955623 13 - 2200435 CAGGAGGCACTAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391385 13 - 13651311 CAGGATGTACCAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386531 1 - 108792865 ------------C i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231602 13 - 7082604 CAGAAGGCACTGT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 113639 2286 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=59449.000000 s hg38.chr2_KI270774v1_alt 124085 8 + 223625 GTTGGAAG s panTro5.chr2A 1413271 8 + 111504155 GTTGGAAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362034 8 + 114371477 GTTGGAAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387439 8 + 1464242 TTTGGAAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110638 8 + 81552678 GTTGGAAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440770 8 + 108979918 GTTGGAAG i rheMac8.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441128 8 + 3644372 GTTGGAAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395736 8 - 10304083 GTTGGAAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1468117 8 - 107702431 GTTGGAAG i chlSab2.chr14 C 0 I 3316 s manLeu1.NW_012103754v1 955636 8 - 2200435 GTTGGAAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391398 8 - 13651311 GTTGCAAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386532 8 - 108792865 GTCGGAAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231615 8 - 7082604 GTTGGAAT i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 115925 8 + 287728 GTTGGAAG i aotNan1.NW_018513311v1 I 2286 C 0 e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e macFas5.chr13 1413145 0 - 111193037 C a score=3030.000000 s hg38.chr2_KI270774v1_alt 124093 1 + 223625 G s panTro5.chr2A 1413279 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362042 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387447 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110646 1 + 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440778 1 + 108979918 G i rheMac8.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441136 1 + 3644372 G i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395744 1 - 10304083 A i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 955644 1 - 2200435 G i manLeu1.NW_012103754v1 C 0 I 67 s colAng1.NW_012118821v1 1391406 1 - 13651311 A i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386540 1 - 108792865 G i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231623 1 - 7082604 A i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 115933 1 + 287728 G i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e chlSab2.chr14 1468125 3316 - 107702431 I e macFas5.chr13 1413145 0 - 111193037 C a score=62771.000000 s hg38.chr2_KI270774v1_alt 124094 12 + 223625 GAACAGGGCAGG s panTro5.chr2A 1413280 12 + 111504155 GAACAGGGTAGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362043 12 + 114371477 GAACAGGGTAGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387448 11 + 1464242 GAAT-GGGCAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110647 12 + 81552678 GAATGGGCCAGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440779 12 + 108979918 GAACGGGGCAGG i rheMac8.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441137 12 + 3644372 GAACGGGGCAGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395745 12 - 10304083 GAATGGGGCAGG i cerAty1.NW_012000820v1 C 0 T 210 s manLeu1.NW_012103754v1 955712 12 - 2200435 GAATAGGGCAGG i manLeu1.NW_012103754v1 I 67 C 0 s colAng1.NW_012118821v1 1391407 12 - 13651311 GAATGGGGCAAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386541 12 - 108792865 GACTGGGGCAGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231624 12 - 7082604 GAATGGGACAGG i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 115934 12 + 287728 GAATGGGGCAGG i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e chlSab2.chr14 1468125 3316 - 107702431 I e macFas5.chr13 1413145 0 - 111193037 C a score=44503.000000 s hg38.chr2_KI270774v1_alt 124106 10 + 223625 GTCCTTCTTG s panTro5.chr2A 1413292 10 + 111504155 GTCCTTCTTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362055 10 + 114371477 GTCCTTCTTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387459 10 + 1464242 CTCCTTCCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110659 10 + 81552678 CTCCTTCTTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440791 10 + 108979918 TTCCTTCTTG i rheMac8.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441149 10 + 3644372 TTCCTTCTTG i macNem1.NW_012011978v1 C 0 T 98 s manLeu1.NW_012103754v1 955724 10 - 2200435 GTCCTTCTTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391419 10 - 13651311 CTCCTTCTTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386553 7 - 108792865 CTC---CTTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231636 10 - 7082604 CTCCTTCTTG i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 115946 10 + 287728 CTCCTTCTTG i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e chlSab2.chr14 1468125 3316 - 107702431 I e cerAty1.NW_012000820v1 1395757 210 - 10304083 T e macFas5.chr13 1413145 0 - 111193037 C a score=22032.000000 s hg38.chr2_KI270774v1_alt 124116 6 + 223625 TTTGTA s panTro5.chr2A 1413302 6 + 111504155 TTTGTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362065 6 + 114371477 TTTGTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387469 6 + 1464242 TTTGTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110669 6 + 81552678 TTGGTA i nomLeu3.chr19 C 0 C 0 s manLeu1.NW_012103754v1 955734 6 - 2200435 TTTGTA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391429 6 - 13651311 TTTGTA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386560 6 - 108792865 TTTGTA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231646 6 - 7082604 TTTGCA i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 115956 6 + 287728 TTTGTA i aotNan1.NW_018513311v1 C 0 I 30 e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e chlSab2.chr14 1468125 3316 - 107702431 I e cerAty1.NW_012000820v1 1395757 210 - 10304083 T e macNem1.NW_012011978v1 1441159 98 + 3644372 T e macFas5.chr13 1413145 0 - 111193037 C e rheMac8.chr13 1440801 0 + 108979918 C a score=59765.000000 s hg38.chr2_KI270774v1_alt 124122 28 + 223625 TGATCTAGTCATTGCTGCAGGAGCTAC-C s panTro5.chr2A 1413308 28 + 111504155 TGATCTAGTCATTGCTGCAGGAGCTAC-C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362071 28 + 114371477 TGATCTAGTCATTGCTGCAGGAGCTAC-C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387475 28 + 1464242 TGATCTAGTCATTGCTGCAGGAGCTAC-C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110675 29 + 81552678 TGGTGTGGCCAATGCTGCAGGACGTACAC i nomLeu3.chr19 C 0 C 0 s manLeu1.NW_012103754v1 955740 28 - 2200435 TGGTGTAGTCAGTGCCACAGGAGCTAC-C i manLeu1.NW_012103754v1 C 0 T 123 s colAng1.NW_012118821v1 1391435 28 - 13651311 TGATCTACTCATTACCACAGGAGCTAC-C i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386566 27 - 108792865 TAA-GTGGTCAGTGCCGTAGGAGCTAC-C i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231652 28 - 7082604 TAATGTGGTCAGTGCTGCAGGAGCTAC-A i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 115962 30 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e chlSab2.chr14 1468125 3316 - 107702431 I e cerAty1.NW_012000820v1 1395757 210 - 10304083 T e macNem1.NW_012011978v1 1441159 98 + 3644372 T e macFas5.chr13 1413145 0 - 111193037 C e rheMac8.chr13 1440801 0 + 108979918 C a score=1694.000000 s hg38.chr2_KI270774v1_alt 124150 1 + 223625 A s panTro5.chr2A 1413336 1 + 111504155 A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362099 1 + 114371477 A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387503 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 I 1 s nomLeu3.chr19 1110704 1 + 81552678 A i nomLeu3.chr19 C 0 C 0 s colAng1.NW_012118821v1 1391463 1 - 13651311 A i colAng1.NW_012118821v1 C 0 I 1 s calJac3.chr14 1386593 1 - 108792865 A i calJac3.chr14 C 0 I 1 s saiBol1.JH378218 1231680 1 - 7082604 G i saiBol1.JH378218 C 0 I 1 e aotNan1.NW_018513311v1 115962 30 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e manLeu1.NW_012103754v1 955768 123 - 2200435 T e chlSab2.chr14 1468125 3316 - 107702431 I e cerAty1.NW_012000820v1 1395757 210 - 10304083 T e macNem1.NW_012011978v1 1441159 98 + 3644372 T e macFas5.chr13 1413145 0 - 111193037 C e rheMac8.chr13 1440801 0 + 108979918 C a score=18037.000000 s hg38.chr2_KI270774v1_alt 124151 9 + 223625 GTTGTAAAT s panTro5.chr2A 1413337 9 + 111504155 GTTGTAAAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362100 9 + 114371477 GTTGTAAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387505 9 + 1464242 GTTGTAAGT i gorGor5.CYUI01015607v1 I 1 C 0 s nomLeu3.chr19 1110705 9 + 81552678 TGTGGAAGA i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1413145 9 - 111193037 GTTGTAAGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441061 9 + 3644372 GTTGTAAGC i macNem1.NW_012011978v1 T 98 C 0 s colAng1.NW_012118821v1 1391465 9 - 13651311 GTTGTAAGT i colAng1.NW_012118821v1 I 1 C 0 s calJac3.chr14 1386595 9 - 108792865 ATCAGAAGG i calJac3.chr14 I 1 C 0 s saiBol1.JH378218 1231682 9 - 7082604 GTTGGAAGA i saiBol1.JH378218 I 1 T 134 e aotNan1.NW_018513311v1 115962 30 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e manLeu1.NW_012103754v1 955768 123 - 2200435 T e chlSab2.chr14 1468125 3316 - 107702431 I e cerAty1.NW_012000820v1 1395757 210 - 10304083 T e rheMac8.chr13 1440801 0 + 108979918 C a score=36861.000000 s hg38.chr2_KI270774v1_alt 124160 7 + 223625 GAATGGA s panTro5.chr2A 1413346 7 + 111504155 GAATGGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362109 7 + 114371477 GAATGGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387514 7 + 1464242 GAATGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110714 7 + 81552678 GAATGGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1413154 7 - 111193037 GAATGGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441070 7 + 3644372 GAATGGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395547 7 - 10304083 GAATGGA i cerAty1.NW_012000820v1 T 210 C 0 s manLeu1.NW_012103754v1 955645 7 - 2200435 GAATGGA i manLeu1.NW_012103754v1 T 123 C 0 s colAng1.NW_012118821v1 1391474 7 - 13651311 GAATGGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386604 7 - 108792865 GACTGGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231557 7 - 7082604 AAATGGG i saiBol1.JH378218 T 134 C 0 e aotNan1.NW_018513311v1 115962 30 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e chlSab2.chr14 1468125 3316 - 107702431 I e rheMac8.chr13 1440801 0 + 108979918 C a score=15600.000000 s hg38.chr2_KI270774v1_alt 124167 2 + 223625 GC s panTro5.chr2A 1413353 2 + 111504155 GC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362116 2 + 114371477 GC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387521 2 + 1464242 GC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110721 2 + 81552678 GC i nomLeu3.chr19 C 0 T 262 s macFas5.chr13 1413161 2 - 111193037 GC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441077 2 + 3644372 GC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395554 2 - 10304083 GC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471441 2 - 107702431 GC i chlSab2.chr14 I 3316 C 0 s manLeu1.NW_012103754v1 955652 2 - 2200435 GC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391481 2 - 13651311 GC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386611 2 - 108792865 GC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231564 2 - 7082604 GC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 115962 30 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e rheMac8.chr13 1440801 0 + 108979918 C a score=29896.000000 s hg38.chr2_KI270774v1_alt 124169 6 + 223625 AGGCTC s panTro5.chr2A 1413355 6 + 111504155 AGGCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362118 6 + 114371477 AGGCTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387523 6 + 1464242 AGGCTC i gorGor5.CYUI01015607v1 C 0 C 0 s macFas5.chr13 1413163 6 - 111193037 AGGCTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441079 6 + 3644372 AGGCTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395556 6 - 10304083 AGGTTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471443 6 - 107702431 AGGGTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955654 6 - 2200435 AGGTGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391483 6 - 13651311 AGGCTC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386613 6 - 108792865 AGGCTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231566 6 - 7082604 AGGCTC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 115962 30 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e rheMac8.chr13 1440801 0 + 108979918 C e nomLeu3.chr19 1110723 262 + 81552678 T a score=215039.000000 s hg38.chr2_KI270774v1_alt 124175 41 + 223625 CTTCCTGTTTGCATAGTGTAGTGAGTGCCGCAGGAGGCAGT s panTro5.chr2A 1413361 41 + 111504155 CTTCCTGTTTGCATGGTGTAGTGAGTGCCGCAGGAGGCAGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362124 41 + 114371477 CTTCCTGTTTGCATGGTGTAGTGAGTGCCGCAGGAGGCAGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387529 41 + 1464242 CTTCCTGTTTGCATGGTGTAGTGAGTGCCACAGGAGGCAGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110461 41 + 81552678 CTTCTTGTTTGTATGATGTGGTCAGTGCCACAGGAACTACC i nomLeu3.chr19 T 262 I 2059 s macFas5.chr13 1413169 41 - 111193037 CTTCCTGTTTTTATGGTGTAGTCAGTCCCGCAGGAGGCACT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441085 41 + 3644372 CTTCCTGTTTTTATGGTGTAGTCAGTCCCGCAGGAGGCACT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395562 41 - 10304083 CTTCCTGTTTTTATGGTGTAGTCAGTCCCGCAGGAGGCACT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471449 41 - 107702431 CTTCTTGTTTGTATGGTGTAGTCAGTACTGCAGGAGGCACT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955660 41 - 2200435 CTTCCTGTTTTTATGGTGTAGTCAGTGCCACAGGAGGCACT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391489 41 - 13651311 CTTCCTGTTGGTATGGTGTAGTCAGTGCCGCAGGAGCTACC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386619 37 - 108792865 ---CTTGTTTGTATAA-GTGGTCAGTGCCGTAGGAGCTACC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231572 41 - 7082604 CTTCTTGTTTGTATAGTGTGGTGAGTGCTGCAGAAGGCACT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 115962 30 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e rheMac8.chr13 1440801 0 + 108979918 C a score=9477.000000 s hg38.chr2_KI270774v1_alt 124216 2 + 223625 AC s panTro5.chr2A 1413402 2 + 111504155 AC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362165 2 + 114371477 AC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387570 2 + 1464242 AC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112561 2 + 81552678 AT i nomLeu3.chr19 I 2059 T 1992 s macFas5.chr13 1413210 2 - 111193037 AC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441126 2 + 3644372 AC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395603 2 - 10304083 AC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471490 2 - 107702431 AC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955701 2 - 2200435 AC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391530 2 - 13651311 AT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386656 2 - 108792865 AC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231613 2 - 7082604 GT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 115962 30 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e rheMac8.chr13 1440801 0 + 108979918 C a score=206303.000000 s hg38.chr2_KI270774v1_alt 124218 28 + 223625 GTTGGAAGGGAATAGGGCAGGGTCCTTC s panTro5.chr2A 1413404 28 + 111504155 GTTGGAAGGGAATAGGGCAGGGTCCTTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362167 28 + 114371477 GTTGGAAGGGAATAGGGCAGGGTCCTTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387572 28 + 1464242 GTTGGAAGGGAATAGGGCAGGGACCTTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110571 28 + 81552678 GTTGGAAGGGAATAGGGCAGGGTCCTTC i nomLeu3.chr19 T 1992 C 0 s macFas5.chr13 1413212 28 - 111193037 GTTGGAAGGGAACGGGGCAGGTTGCTTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441128 28 + 3644372 GTTGGAAGGGAACGGGGCAGGTTCCTTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395605 28 - 10304083 GTTGGAAGGGAATAGGGCAGGGTCCTTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471492 28 - 107702431 GTTGGAAGGGAATAGGGCAGGGTCCTTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955703 28 - 2200435 GTTGGAAGGGAATAGGGCAGGGTCCTTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391532 28 - 13651311 GTTGGAAGAGAACGGGGCAGGTTCCTTC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386658 28 - 108792865 GTTGGAAGGGACTGGGGCAGGCTCCTTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231615 28 - 7082604 GTTGGAATAGAATGGGACAGGCTCCTTC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 115992 28 + 287728 GTTGGAAGAGAATGGGGCAGGCTCCTTC i aotNan1.NW_018513311v1 I 30 C 0 e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1320098 0 + 1864846 C e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e rheMac8.chr13 1440801 0 + 108979918 C a score=27902.000000 s hg38.chr2_KI270774v1_alt 124246 3 + 223625 TTG s panTro5.chr2A 1413432 3 + 111504155 TTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362195 3 + 114371477 TTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387600 3 + 1464242 TTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110599 3 + 81552678 CTG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1413240 3 - 111193037 TTG i macFas5.chr13 C 0 T 201 s macNem1.NW_012011978v1 1441156 3 + 3644372 TTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395633 3 - 10304083 TTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471520 3 - 107702431 TTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955731 3 - 2200435 TTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391560 3 - 13651311 TTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386686 3 - 108792865 TTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231643 3 - 7082604 TTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1320098 3 + 1864846 TTG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 116020 3 + 287728 TTG i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e rheMac8.chr13 1440801 0 + 108979918 C a score=263194.000000 s hg38.chr2_KI270774v1_alt 124249 35 + 223625 TTTGTGTGGTGTAGTCAGTGCCGCAGGAGCTACCG s panTro5.chr2A 1413435 35 + 111504155 TTTGTATGGTGTAGTCAGTGCCGCAGGAGCTACCG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362198 35 + 114371477 TTTGTATGGTGTAGTCAGTGCCGCAGGAGCTACCG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387603 35 + 1464242 TTTGTATGGTGTAGTCAGTGCCGCAGGAGCTACCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110602 35 + 81552678 TTTGTATGGTGTAGTCAGTGCCGCAGGAGCCACCA i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1413042 35 - 111193037 GTTTTATGGTGTAGTCACTGCCGCAGGAACTACCA i macFas5.chr13 T 201 C 0 s macNem1.NW_012011978v1 1441159 32 + 3644372 ---GTATGGTGTGGCCAGTGCTGCAGGACGTACCA i macNem1.NW_012011978v1 C 0 T 64 s cerAty1.NW_012000820v1 1395636 35 - 10304083 TTTGTATGGTGTAGTCAGTGCCGCAGGAGCTACCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471523 35 - 107702431 TTTGTATGGTGTAGTCAGTGCCGCAGGAGCTACCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955734 35 - 2200435 TTTGTATGGTGTAGTCAGTGCCACAGGAGCTACCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391563 35 - 13651311 TTGGTATGGTGTAGTCAGTGCCGCAGGAGGCACTA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386689 35 - 108792865 TTTGTATAATGTGGTCAGTGCCATAGGAGCTACCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231646 35 - 7082604 TTTGCATAATGTGGTCAGTGCTGCAGGAGCTACAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1320101 35 + 1864846 TTTGTTTAATGTGGTCAGTGCTGCAGGAGCTACAG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 116023 35 + 287728 TTTGTACAATGTGGTCAGTGACACAGTAGCTACCA i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e rheMac8.chr13 1440801 0 + 108979918 C a score=226770.000000 s hg38.chr2_KI270774v1_alt 124284 28 + 223625 TGTTGGAAGGGAATGGGGCAGACTCCTT s panTro5.chr2A 1413470 28 + 111504155 TGTTGGAAAGGAATGGGGCAGACTCCTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362233 28 + 114371477 TGTTGGAAAGGAATGGGGCAGACTCCTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387638 28 + 1464242 TGTTGGAAGGGAATGGGGCAGACTCCTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110637 28 + 81552678 TGTTGGAAGGGAATGGGCCAGACTCCTT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1413077 28 - 111193037 TGTTGTAAGCGAATGGAGCAGGCTCCTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441127 28 + 3644372 CGTTGGAAGGGAACGGGGCAGGTTCCTT i macNem1.NW_012011978v1 T 64 C 0 s cerAty1.NW_012000820v1 1395671 28 - 10304083 TGTTGGAAGGGAACGGGGCAGGTTCCTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471558 28 - 107702431 TGTTGGAAGGGAACGGGGCAGGTTCCTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955769 28 - 2200435 TGTTGGAAGGGAATGGGGCAGGTTCCTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391598 28 - 13651311 CGTTGGAAGGGAATAGGGCAGGGTCCTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386724 28 - 108792865 CATCAGAAGGGACTGGGGCAGGCTCCTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231681 28 - 7082604 TGTTGGAAGAAAATGGGGCAGGCTCCTT i saiBol1.JH378218 C 0 T 67 s cebCap1.NW_016107827v1 1320136 28 + 1864846 TGTTGGAAGAAAATGGGGCAGGCTCCTT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 116058 28 + 287728 CGTTGGAAGGGAATGGGGCAGGCTCCTT i aotNan1.NW_018513311v1 C 0 I 8503 e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e rheMac8.chr13 1440801 0 + 108979918 C a score=1575.000000 s hg38.chr2_KI270774v1_alt 124312 7 + 223625 CTTG------TTG s panTro5.chr2A 1413498 7 + 111504155 CTTG------TTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362261 7 + 114371477 CTTG------TTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387666 7 + 1464242 CTTG------TTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110665 7 + 81552678 CTTG------TTG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1413105 7 - 111193037 CCTGTTT------ i macFas5.chr13 C 0 I 131 s macNem1.NW_012011978v1 1441155 4 + 3644372 CTTG--------- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395699 4 - 10304083 CTTG--------- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471586 4 - 107702431 CTTG--------- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955797 4 - 2200435 CTTG--------- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391626 7 - 13651311 CTTG---TTG--- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386752 7 - 108792865 CTTG------TTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231642 7 - 7082604 CTTG------TTT i saiBol1.JH378218 T 67 C 0 s cebCap1.NW_016107827v1 1320164 7 + 1864846 CTTG------TTT i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 116086 8503 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e rheMac8.chr13 1440801 0 + 108979918 C a score=415324.000000 s hg38.chr2_KI270774v1_alt 124319 51 + 223625 GTACGGTGTGGCCAATGCTGCAGGACGTAC-CATGTTGGAAGAGAATGGGGC s panTro5.chr2A 1413505 51 + 111504155 GTACGGTGTGGCCAATGCTGCAGGACGTAC-CATGTTGGAAGAGAATGGGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362268 51 + 114371477 GTACGGTGTGGCCAATGCTGCAGGACGTAC-CATGTTGGAAGAGAATGGGGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387673 51 + 1464242 GTACGGTGTGGCCAATGCTGCAGGATGTAC-CATGTTGGAAGAGAATGGGGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110672 51 + 81552678 GTATGGTGTGGCCAATGCTGCAGGACGTACACATG-TGGAAGAGAATGGGGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440801 51 + 108979918 GTATGGTGTGGCCAGTGCTGCAGGACCTAC-CATGTTGGAAGAGAATGGGGC i rheMac8.chr13 C 0 I 16 s macFas5.chr13 1413243 51 - 111193037 GTATGGTGTGGCCAGTGCTGCAGGACGTAC-CATGTTGGAAGAGAATGGGGC i macFas5.chr13 I 131 I 16 s macNem1.NW_012011978v1 1441159 51 + 3644372 GTATGGTGTGGCCAGTGCTGCAGGACGTAC-CATGTTGGAAGAGAATGGGGC i macNem1.NW_012011978v1 C 0 I 16 s cerAty1.NW_012000820v1 1395703 51 - 10304083 GTATGGTGTGGCCAGTGCTGCAGGACGTAC-CATGTTGGAAGAGAATGGGGC i cerAty1.NW_012000820v1 C 0 I 16 s chlSab2.chr14 1471590 51 - 107702431 GTATGGTGTGGCCAGAGCTGCAGGATGTAC-CATGTTGGAAGAGAGTGGGGT i chlSab2.chr14 C 0 I 16 s manLeu1.NW_012103754v1 955801 51 - 2200435 GTATGGTGTGGCCAGTGCTGCAGGACGTAC-CATGTTGGAAGAGAATGGGGC i manLeu1.NW_012103754v1 C 0 I 16 s colAng1.NW_012118821v1 1391633 51 - 13651311 GTATGGTGTGGCCAGTGCTGCAGGACGTAC-CATGTTGGAAGAGAATGGGGC i colAng1.NW_012118821v1 C 0 I 16 s calJac3.chr14 1386759 51 - 108792865 GTATAATGTGGTCAGTGCCATAGGAGCTAC-CATGTCGGAAGAGAATGGAGC i calJac3.chr14 C 0 I 16 s saiBol1.JH378218 1231649 51 - 7082604 GCATAATGTGGTCAGTGCTGCAGGAGCTAC-AGTGTTGGAAGAAAATGGGGC i saiBol1.JH378218 C 0 I 16 s cebCap1.NW_016107827v1 1320171 51 + 1864846 GTATAACGTGGTGAGTGCTGCAGGAGGCAC-CTTGTTGACAGGGAATGGAGC i cebCap1.NW_016107827v1 C 0 I 16 e aotNan1.NW_018513311v1 116086 8503 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=1065837.000000 s hg38.chr2_KI270774v1_alt 124370 125 + 223625 TTGAGTTTGTTTTGCTTTACACTTTGTCATAAAGGAAATTATCAGTTCTCTGCAT-AAGCCCCTATTTTTTAACA-AG-GGGGTGTGTGTGCATGCACGGCAAGCTGGTCCCTTTAAACATTTTAGAA s panTro5.chr2A 1413556 125 + 111504155 TTGAGTTTGTTTTGCTTTACACTTTGTCATAAAGGAAATTATCAGTTCTCTGCAT-AAGCCCCTATTTTTTAACA-AG-GGGGTGTGTGTGCATGCACGGCAAGCTGGTCCCTTTAAACATTTTAGAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362319 125 + 114371477 TTGAGTTTGTTTTGCTTTACACTTTGTCATAAAGGAAATTATCAGTTCTCTGCAT-AAGCCCCTATTTTTTAACA-AG-GGGGTGTGTGTGCATGCACGGCAAGCTGGTCCCTTTAAACATTTTAGAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387724 123 + 1464242 TTGAGTCTGTTTT-CTTTACACTTTGTCATAAAGGAAATTATCAGTTCTCTGCAT-AAGCCCCTATTTTTTAACA-A--GGAGTGTGTGTGCATGCACGGCAAGCTGGTCCCTTTAAACATTTTAGAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110723 125 + 81552678 TTGAGTCTGTTTTTCTTTTCACTTTGTCCTAAAGGAAATTATCAGGTCTCTGCAT-AAGCCCCTATTTTTTAACA-AG-GGAGTGTGTGTGCATACATGGCAAGCTGGTCCCTTTAAACATTTTAGAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440868 126 + 108979918 TTGAGTCTTTTTTTCTTTTCACTTTGTCCTAAAGGAAATTATCAGGTCTCTGCAT-AAGCCCCGATTTTTTAACA-GGGAGGGGGTGTGTGCATGCATGGCAAACTAGTCCCTTTAAAAATTTTAGAA i rheMac8.chr13 I 16 C 0 s macFas5.chr13 1413310 126 - 111193037 TTGAGTCTTTTTTTCTTTTCACTTTGTCCTAAAGGAAATTATCAGGTCTCTGCAT-AAGCCCCGATTTTTTAACA-GGGAGGGGGTGTGTGCATGCATGGCAAACTAGTCCCTTTAAAAATTTTAGAA i macFas5.chr13 I 16 C 0 s macNem1.NW_012011978v1 1441226 126 + 3644372 TTGAGTCTTTTTTTCTTTTCACTTTGTCCTAAAGGAAATTATCAGGTCTCTGCAT-AAGCCCCGATTTTTTAACA-GGGAGGGGGTGTGTGCATGCATGGCAAACTAGTCCCTTTAAAAATTTTAGAA i macNem1.NW_012011978v1 I 16 C 0 s cerAty1.NW_012000820v1 1395770 126 - 10304083 TTGAGTCTTTTTTTCTTTTCACTTTGTCCTAAAGGAAATTATCAGGTCTCTGCAT-AAGCCCCAATTTTTTAACA-GGTGGGGGGTGTGTGCATGCATGGCAAACTGGTCCCTTTAAAAATTTTAGAA i cerAty1.NW_012000820v1 I 16 C 0 s chlSab2.chr14 1471657 126 - 107702431 TTGAGTC-TTTTTTCTTTTCACTTTGTCCTAAAGGAAATTATCAGGTCTCTGCATAAAGCCCCAATTTTTTAACA-GGGAGGGGGTGTGTGCATGCATGGCAAACTGGTCCCTTTAAAAATTTTAGAA i chlSab2.chr14 I 16 I 216 s manLeu1.NW_012103754v1 955868 127 - 2200435 TTGAGTCTTTTTTTCTTTTCACTTTGTCCTAAAGGAAATTACCAGGTCTCTGCATAAAGCCCCAATTTTTTAACA-GGTAAGGGGTGTGTGCATGCATGGCAAACTGGTCCCTTTAAAAATTTTAGAA i manLeu1.NW_012103754v1 I 16 C 0 s colAng1.NW_012118821v1 1391700 127 - 13651311 TTGAGACTTTTTTTCTTTTCACTTTGTCCTAAAGGAAATTATCAAGTCTCTGCAT-AAGCCCTGATTTTTTAACACGGAGGGGGGGGTGTGCATGCATGGCAAACTGGTCCCTTTAAAAATTTTAGAA i colAng1.NW_012118821v1 I 16 C 0 s calJac3.chr14 1386826 123 - 108792865 TTGAGTCTTCTTTTCTTTTCACTTTGCCCTAAAGGAAATTATCAGGTCTCTGTAT-AAGCCCCTATTTTTTAACA-CG-T--GTGTGTGTGCACACATAGCAAACTTGTCCTTTAAAGGTTTTTTGAC i calJac3.chr14 I 16 C 0 s saiBol1.JH378218 1231716 125 - 7082604 TTGAGCCTTTTTTTCTTTTCACTTTGTCCTAAAGGAAATTATCAGGTCTCTGTAT-AAGCCCCTATTTTTTAACA-CA-TGAGTGTGTGTGCATATATAGCAAACTTGTCCTTTAAAAATTTTTTGAC i saiBol1.JH378218 I 16 C 0 s cebCap1.NW_016107827v1 1320238 125 + 1864846 TTGAGTCTTTTTTTCTTTTCACTTTGTCCTAAAGGAAATTATCAGGTCTTTGTAT-AAGCCCCTATTTTTTAACA-CA-TGAGTGCATGTGCATACATAGCAAACTTGTCCTTTAAAATTTTTTTGAC i cebCap1.NW_016107827v1 I 16 C 0 s aotNan1.NW_018513311v1 124589 125 + 287728 TTGAGTCTTTTTTCCTTTTCACTTTGTCCAAAAAGAAATTATCAGGTCTCTGTAT-AAGCCCGTATTTTTTACCA-GA-TGAGTGTGTGTGCATACATAGCAAACTTGTCCTTTAAAAATTTTTTGAC i aotNan1.NW_018513311v1 I 8503 C 0 e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=40110.000000 s hg38.chr2_KI270774v1_alt 124495 4 + 223625 TCTC s panTro5.chr2A 1413681 4 + 111504155 TCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362444 4 + 114371477 TCTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387847 4 + 1464242 TCTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110848 4 + 81552678 TCTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440994 4 + 108979918 TCTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413436 4 - 111193037 TCTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441352 4 + 3644372 TCTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395896 4 - 10304083 TCTC i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 955995 4 - 2200435 TCTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391827 4 - 13651311 TCTC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386949 4 - 108792865 TCTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231841 4 - 7082604 TCTC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1320363 4 + 1864846 TCTC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 124714 4 + 287728 TCTC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e chlSab2.chr14 1471783 216 - 107702431 I a score=3549168.000000 s hg38.chr2_KI270774v1_alt 124499 395 + 223625 TAAATATAAAGCTTAAGATAT-------TAGGAATGCTGTTGATAACTGTGCATTTGGGGTGAAGGCGTTTTGGTAGTATCATTTAAAGGATTTCCAGCTTC--CTTCTGTTTCTGTTACCAACCTGTGGAGACCTCTTCATCATCCTGGACTCAGATCAGGGTCCTCGACTCTGCTGCACTCCCAGCCAGCTGAGGCTGTTGTTCCTCACCTGTGTG-TTTTTATAGAAGTCTAGGAGCT---------GGGGGGTAGGAGGTGGGTGTGGGCAGGGGTCACGT-CACTTGCAGGTTGCCTTTGCTAGAAGCAGTCA-----CATTGGCTGAGAACAGAATCCCCAGGGCCTGAGGATGTCCTGCAGAAATTTGGGTTTTAGTGTGTAGCTTGGCATCAGCCTAGAGATAAGACAAATT s panTro5.chr2A 1413685 395 + 111504155 TAAATATAAAGCTTAAGATAT-------TAGGAATGCTGTTGATAACTGTGCATTTGGGGTGAAGGTGTTTTGGTAGTATCATTTAAAGGATTTCCAGCTTC--TTTCTGTTTCTGTTACCAACCTGTGGAGACCTCTTCATCATCCTGGACTCAGATCAGGGTCCTCGACTCTGCTGCGCTCCCAGCCAGCTGAGGCTGTTGTTCCCCACCTGTGTG-TTTTTATAGAAGTCTAGGAGCT---------GGGGGGTAGGAGGTGGGTGTGGGCAGGGGTCACGT-CACTTGCAGGTTGCCTTTGCCAGAAGCAGTCA-----CATTGGCTGAGAACAGAATCCCCAGGGCCTGAGGATGTCCTGCAGAAATTTGGGTTTTAGTGTGTAGCTTGGCGTCAGCCTAGAGATAAGACAAATT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362448 395 + 114371477 TAAATATAAAGCTTAAGATAT-------TAGGAATGCTGTTGATAATTGTGCATTTGGGGTGAAGGTGTTTTGGTAGTATCATTTAAAGGATTTCCAGCTTC--TTTCTGTTTCTGTTACCAACCTGTGGAGACCTCTTCATCATCCTGGACTCAGATCAGGGTCCTCGACTCTGCTGCGCTCCCAGCCAGCTGAGGCTGTTGTTCCCCACCTGTGTG-TTTTTATAGAAGTCTAGGAGCT---------GGGGGGTAGGAGGTGGGTGTGGGCAGGGGTCACGT-CACTTGCAGGTTGCCTTTGCCAGAAGCAGTCA-----CATTGGCTGAGAACAGAATCCCCAGGGCCTGAGGATGTCCTGCAGAAATTTGGGTTTTAGTGTGTAGCTTGGCGTCAGCCTAGAGATAAGACAAATT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387851 395 + 1464242 TAAATATAAAGCTTAAGATAT-------TAGGAATGCTGTTGATAACTGTGCGTTTGGGGTGAAGGTGTTTTGGTAGTATCATTTAAAGGATTTCCAGCTTC--TTTCTGTTTCTGTTACCAACCTGTGGAGACCTCTTCATCATCCTGGACTCAGATCAGGGTCCTCGACTCTGCTGCGCTCCCAGCCAGCTGAGGCTGTTGTTCCCCACCTGTGTG-TTTTTATAGAAGTCTAGGAGCT---------GGGGGGTAGGAGGTGGGTGTGGGCAGGGGTCATGT-CACTTGCAGGTTGCCTTTGCTAGAAGCAGTCA-----CATTGGCTGAGAACAGAATCCCCAGGGCCTGAGGATGTCCTGCAGAAATTTGGGTTTTAGTGTGTAGCTTGGCATCAGCCTAGAGATAAGACAAATT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110852 395 + 81552678 TAAATATAAAGCTTAAGATAT-------TAGGAATGCTGTTGATAACTGTGCATTTGGGGTGAAGGTGTTTTGGTAGTATCATTTAAAGGATTTCCAGCTTC--TTTCTGTTTCTGTTACCAACCTGTGGAGACCTCTTCATCATCCTGGACTCAGATCAGGGTCCTCGACTTTCTTGCACTCCCAGCCAGCTGAGGCTGTTGCTCCCCACCTGTGTG-TTTTTATAGAAGTCTAGGAGCT---------GGGGGGTAGGAGGTGGGTGTGGGCAGGGGTCACAT-CACTTGCAGGTTGCCTTTGCTAGAAGCAGTCA-----CATCAGCTGAGAACAGAATCCCCAGGGCCTGAGGATATCCTGCAGAAATTTTGGTTTTAGTGTGTAGCTTGGCATCAGCCTAGAGATAAGGCAAATT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440998 402 + 108979918 TAAATATAAAGCTTAAGATAT-------TAGTAATGCTGTTGATAACTGTGTGTTTGGGGTGATGGTGTTTTTGTAGTATCGTTTAAAGGATTTCCAGCTTC--TTTCTGTTTCTGTTACCAACCTGTGGAGACCTCTTCATCATCCTGGACTCAGATCC-AGTCCTCAACACTCCTGTGCTCCCAGCCAGCTGAGGCTGTTGTTCC-CGCCCGTGTG-TTTTTATAGAAGTCTAGGAGTTGGGTGGGGGGGGGGGTAGGAGGTGGGTGTGGGCAGGGGTCACGTCCGCTTACAGGTTACGTTTGCTAGAAGCAGTCA-----CATTGGCTGAGAACAGAATCCCCAGGGCCTGAGGATATCAGCCAGGAAACTGGGTTTT-GTGTGTAGCTTGGCATCAGCCTAGAGATCAGACAAATT i rheMac8.chr13 C 0 I 342 s macFas5.chr13 1413440 392 - 111193037 TAAATATAAAGCTTAAGATAT-------TAGTAATGCTGTTGATAACTGTGTGTTTGGGGTGATGGTGTTTTTGTAGTATCGTTTAAAGGATTTCCAGCTTC--TTTCTGTTTCTGTTACCAACCTGTGGAGACCTCTTCATCATCCTGGACTCAGATCC-AGTCCTCAACACTCCTGTGCTCCCAGCCAGCTGAGGCTGTTGTTCC-CGCCCGTGTG-TTTTTATAGAAGTCTAGGAGTT----------GGGGGTAGGAGGTGGGTGTGGGCAGGGGTCACGT-CGCTTACAGGTTACGTTTGCTAGAAGCAGTCA-----CATTGGCTGAGAACAGAATCCCCAGGGCCTGAGGATATCATGCAGGAAACTGGGTTTTAGTGTGTAGCTTGGCATCAGCCTAGAGATCAGACAAATT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441356 392 + 3644372 TAAATATAAAGCTTAAGATAT-------TAGTAATGCTGTTGATAACTGTGTGTTTGGGGTGATGGTGTTTTTGTAGTATCATTTAAAGGATTTCCAGCTTC--TTTCTGTTTCTGTTACCAACCTGTGGAGACCTCTTCATCATCCTGGACTCAGATCC-AGTCCTCAACACTCCTGTGCTCCCAGCCAGCTGAGGCTGTTGTTCC-CGCCCGTGTG-TTTTTATAGAAGTCTAGGAGTT----------GGGGATAGGAGGTGGGTGTGGGCAGGGGTCACGT-CGCTTACAGGTTACGTTTGCTAGAAGCAGTCA-----CATTGGCTGAGAACAGAATCCCCAGGGCCTGAGGATATCATGCAGGAAACTGGGTTTTAGTGTGTAGCTTGGCATCAGCCTAGAGATCAGACAAATT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395900 390 - 10304083 TAAATATAAAGCTTGAGATAT-------TAGTAATGCTGTTGATAACTGTGCATTTGGGGTGACGGTA-TTTTGTAGTATCATTTAAAGGATTTGCAGCTTC--TTTCTGTTTCTGTTGCCAACCTGTGGAGAC--CTTCATCATCCTGGGCTCAGATCAGGGTCCTCAACACTCCTGCGCTCCCAGCCAGCTGAGGCTGTTGTTCC-CGCCTGTGTG-TTCTTATAGAAGTCTAGGAGTT----------GGGGGTAGGAGGTGGGTGTGGGCAGGGGTCACAT-CGCTTACAGGTTACGTTTGCTGGAAGCAGTCA-----CATCGGCTGAGAACAGAATCCCCAGGGCCTGAGGATATCCTGCAGGAAACTGGGTTTTAGTGTGTAGCTTGGCATCAGCCTAGAGATAAGACAAATT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471999 393 - 107702431 TAAATATAAAGCTTAAGATAT-------TAGTAATGCTGCTGATAACTGTGCCTTTGGGGTGATGGTGTTTTTGTTGTGTCATTTAAAGGATTTCCAGCTTC--TTTCTGTTTCTGTTACCAACCTGTGGAGACCTCTTCATCATCCTGGACTCAGATCAGGGTCCTCAACACTCCTGCGCTCCCAGCCAGCTGAGGCTGTTGTTCC-CGCCTGTGTG-TTTTTATAGAAGTCTAGGAGTT----------GGGGGTAGGAGGTGGGTGTGGGCAGGGGTCACAT-CGCTTACAAGTTACGTTTGCTAGAAGCAGTCA-----CATCGGCTGAGAACAGAATCCCCAGGGCCTGACGATATCCTGCAGGAAACTGGGTTTTAGTGTGTAGCTTGCCATCAGCCTAGAGATAAGACAAATT i chlSab2.chr14 I 216 C 0 s manLeu1.NW_012103754v1 955999 393 - 2200435 TAAATATAAAGCTTGAGATAT-------TAGTAATGCTGTTGATAACTGTGCATTTGGGGTGATGGTATTTTTGTAGTATCATTTAAAGGATTTCCAGCTTC--TTTCTGTTTCTGTTACCAACCTGTGGAGACCTCTTCATCATCCTGGACTCAGATCAGGGTCCTCAACACTCCTGCACTCCCAGCCAGCTGAGGCTGTTGTTCC-CGCCTGTGTG-TTTTTATAGAAGTCTAGGAGTT----------GGGGGTAGGAGGTGGGTGTGGGCAGGGGTCACAT-CGCTTACAGGTTACGTTTGCTGGAAGCAGTCA-----CATCGGCTGAGAGCAGAATCCCCAGGGCCTGAGGATATCCTGCAGGAAACTGGGTTTTAGTGTGTAGCTTGGCATCAGCCTAGAGATAAGACAAATT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391831 392 - 13651311 TGAATATAAAGCTTAAGATAT-------TAGTAATGCTGTTGATAACTGTG--TTTGGGGTGAGGGTGTTTGTGTAGTATCATTTAAAGGATTTCCAGCTTC--TTTCTGTTTCTGTTACCAACCTGTGGAAACCTCTTCATCATCCTGGACTCAGATCAGGGTCCTCAACACTCCTGCGCTCCCAGCCAGCTGAGGCCGTTGTTCC-CGCCTGTGTGTTTTTTATAGAAGTCTAGGAGTT----------GGGGGTAGGAGGTGGGTGTGGGCAGGGGTCACGT-CGCTTACAGGTTGCGTTTGGTAGAAGCAGTCA-----CATCAGCTGAGAACAGAATCCCCAGGGCCTGAGGATATCCTGCAGAAAACTGGGTTTTAGTGTGTAGCTTGGCATCAGCCTAGAGATAAGACAAATT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1386953 399 - 108792865 TAAGTATAAAGCTGAAGCTCT-------TAGGAAAGCTGTTGATAATCGTGCGTTTGGGATGAAGGTGTTTTGCTGCCATCATTTAAAGCATTTCCAGCTTC--TTTCTGTTTCTGTTACCAACCTGTGGAAACCTCTTCATCATCCTGGCCTCGCATCTGGGTTCTCCAATCTCCTGCACTCCCAGCCAGCTGAGGCTGCTGTTCCCCGCCTGTGTG-TTTTTATGGAAGACCAGGAGTT---------GGGTGCTAGGAGGTGGGTCTGGGCCGGGCTCATGT-CACTAGCAGGTTCCCCTTGCAAGAAGCATCCAGCCAGCATTGGCAGAGAACAGAATCCCCAGGGCCTGAGACTATCCTGCAGAAATTTGGGTTTCAGTGTGT-GCTTGGCATCAGCCTAGAGATAAGATAAATT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1231845 398 - 7082604 TGAGTATAAAGCTGAAGCTGT-------TAGGAATGCTGTTGATAATCATGAGTTTGGGATAAAGGTGTTTTGCTGGTATCATTTAAAGGATTTCCAGCTTC--TTTCTGTTTCTGTTACCAACCTGTGGAAACCTCTGCATCATCCTGGCCTCAGATCCGGGATCTTGACTCTCCTGCACTCGCAGCCAGCTGAGGCCGCTGTT-CCTGCCTGTGTG-TTTTTATGGAAGACCAGGAGTT---------GGGGGCTAGGAGGTGTGTCTGGGCAGGGCTTATGT-CACTCGCAGGTTCGCCTTGCGAGAAGCATCCAGCCAGTGTTGGTGGAGAACAGAATCCCCAGGGCCTGAGAATATCCTGCAGAAATTTGTGTTTCAGCGTGT-GCTTGGCATCAGCCTAGAGATAAGATAAATT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1320367 389 + 1864846 TGAGTATAAAGCCAAAGCTTTATATGCAAAGGAATGCTGTTGATAGTTGTGCGTTTGGGATGAAGGTGTTTTGCTGGTATCATTTAAAGGATTTCCAGCTTC--TTTCTGTTTCTGTTACCAACCTGGGGAAACCTCTTCATCATCCTGGCCTCAGATCCAGGATCTTGCCTCTCCTGCACTCCCAGCCACCTGAGGCCGCTGTTCCCCGCCTGTGTG-TTTTTGTGGAAGACC--------------------------AGGTGGACCTGGGCAGGGCTCATGT-CGCTCGCAGGTTCCCCTTGCGAGAAGCATCCAGCCAGCGTCGGCGGAGAACAGAATCCCCAGGGCCTGAGAATATCCTGCAGAAATTTGGGTTTCAGTGTGT-GCTTGGCGTCAGCCTAGAGATAAGATAAATT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 124718 400 + 287728 TAAGTATAAAGCTGAAGCTAT-------CAGGAATGATGTTGATAATCGTGCGTTTGGGATGAAGGTGTTTTGCTGGTATCATTTACAGGATTTCCAGCTTCTTTTTCTGTTTCTGTT-CCAACCTGTGGAAACCTCTTCATCATTCTGGCCTCACATCCGGGTTCTTGACTCTCCTGCACTCCCAGCCAGCTGAGGCTGCTGTTCCCCACCTGTGTG-TTTTTATGGATGACTGGGAGTT---------GAGGGCTTGGAGGTGGGTCTGGGCAGGGCTCATGT-TGCTCTCAGGTTCCCCTTGCGAGAAGCATCCAGCTGGTGTCGGCGGAGAACAGCATCCCCAGGGCCTGAGAATATCCTGCAGAAATTTGGGTTTCAGTGTGT-GCTTGGCATCAGTCTAGAGATAAGATAAATT i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=20055.000000 s hg38.chr2_KI270774v1_alt 124894 2 + 223625 CT s panTro5.chr2A 1414080 2 + 111504155 CT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362843 2 + 114371477 CT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1388246 2 + 1464242 CT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1111247 2 + 81552678 CT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1413832 2 - 111193037 CT i macFas5.chr13 C 0 I 14 s macNem1.NW_012011978v1 1441748 2 + 3644372 CT i macNem1.NW_012011978v1 C 0 I 344 s cerAty1.NW_012000820v1 1396290 2 - 10304083 CT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1472392 2 - 107702431 CT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 956392 2 - 2200435 CT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1392223 2 - 13651311 CT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1387352 2 - 108792865 CT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1232243 2 - 7082604 CT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1320756 2 + 1864846 CT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 125118 2 + 287728 CT i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e rheMac8.chr13 1441400 342 + 108979918 I a score=39819.000000 s hg38.chr2_KI270774v1_alt 124896 5 + 223625 ATTTT s panTro5.chr2A 1414082 5 + 111504155 ATTTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362845 5 + 114371477 ATTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1388248 5 + 1464242 ATTTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1111249 5 + 81552678 ATTTT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1413848 5 - 111193037 ATTTT i macFas5.chr13 I 14 C 0 s cerAty1.NW_012000820v1 1396292 5 - 10304083 ATTTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1472394 5 - 107702431 ATTTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 956394 5 - 2200435 ATTTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1392225 5 - 13651311 ATTTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1387354 5 - 108792865 ACTTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1232245 5 - 7082604 ATTTT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1320758 5 + 1864846 ATTTT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 125120 5 + 287728 ATTTT i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I e macNem1.NW_012011978v1 1441750 344 + 3644372 I e rheMac8.chr13 1441400 342 + 108979918 I a score=135772.000000 s hg38.chr2_KI270774v1_alt 124901 13 + 223625 AAAAATCAAGTGC s panTro5.chr2A 1414087 13 + 111504155 AAAAGTCAAGTGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362850 13 + 114371477 AAAAGTCAAGTGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1388253 13 + 1464242 AAAAATCAAGTGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1111254 13 + 81552678 AAAAATCAAGTGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1441742 13 + 108979918 aaaaaTCAAGTGT i rheMac8.chr13 I 342 C 0 s macFas5.chr13 1413853 13 - 111193037 AAAAATCAAGTGC i macFas5.chr13 C 0 I 323 s macNem1.NW_012011978v1 1442094 13 + 3644372 aaaaaTCAAGTGT i macNem1.NW_012011978v1 I 344 C 0 s cerAty1.NW_012000820v1 1396297 13 - 10304083 AAAAATCAAGTGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1472399 13 - 107702431 AAAAATCAAGTGC i chlSab2.chr14 C 0 I 424 s manLeu1.NW_012103754v1 956399 13 - 2200435 AAAAATCAAGTGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1392230 13 - 13651311 AAAAATCAAGTGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1387359 13 - 108792865 AAAAATCAAGTGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1232250 13 - 7082604 AAAAATCAAGTAC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1320763 13 + 1864846 AAAAATCAAGTGC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 125125 13 + 287728 AAAAATCAAGTGC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=22920.000000 s hg38.chr2_KI270774v1_alt 124914 2 + 223625 TC s panTro5.chr2A 1414100 2 + 111504155 TC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362863 2 + 114371477 TC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1388266 2 + 1464242 TC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1111267 2 + 81552678 TC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1441755 2 + 108979918 TC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1414189 2 - 111193037 TC i macFas5.chr13 I 323 C 0 s macNem1.NW_012011978v1 1442107 2 + 3644372 TC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1396310 2 - 10304083 TC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1472836 2 - 107702431 TC i chlSab2.chr14 I 424 C 0 s manLeu1.NW_012103754v1 956412 2 - 2200435 TC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1392243 2 - 13651311 TC i colAng1.NW_012118821v1 C 0 I 325 s calJac3.chr14 1387372 2 - 108792865 TC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1232263 2 - 7082604 TC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1320776 2 + 1864846 TC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 125138 2 + 287728 TC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=3280792.000000 s hg38.chr2_KI270774v1_alt 124916 350 + 223625 CATGGCGGGATGGtgatatagttggctgtgtccccacccaaatctcatttgaattcccacatg-ttgtgggagggaccaggtgggaggtaattgaatcatgggggcaggtctttcctgtgatgttctcgtgatagtgaataagtctcacgagatttgacagctttataaggggaagttcccctgcacaagctctctttctgcctgccgccatccatgt---aagacatgacctgctcctccttgccttccaccatgattgtgaggcct------ccacgtggaatcgtaagtccattaaacctccttttcttctcagactcaggtatgtctttatcagcagcatgaaaacagactaatac s panTro5.chr2A 1414102 350 + 111504155 CATGGCAGGATGGtgatatagttggctgtgtccccacccaaatctcatttgaattcccacatg-ttgtgggagggaccaggtgggaggtaattgaatcatgggggcaggtctttcctgtgatgttctcatgatagtgaataagtctcacgagatttgacagctttataagggcaagttcccctgcacaagctctctttctgcctgccgccatccatgt---aagacatgacctgctcctccttgccttccaccatgattgtgaggcct------ccacgtggaatcgtaagtccattaaacctccttttcttctcagactcaggtatgtctttatcagcagcatgaaaacagactaatac i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362865 350 + 114371477 CATGGCAGGATGGtgatatagttggctgtgtccccacccaaatctcatttgaattcccacatg-ttgtgggagggaccaggtgggaggtaattgaatcatgggggcaggtctttcctgtgatgttctcgtgatagtgaataagtctcacgagatttgacagctttataagggcaagttcccctgcacaagctctctttctgcctgccgccatccatgt---aagacatgacctgctcctccttgccttccaccatgattgtgaggcct------ccacgtggaatcgtaagtccattaaacctccttttcttctcagactcaggtatgtctttatcagcagcatgaaaacagactaatac i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1388268 350 + 1464242 CATGGCGGGATGGtgatatagttggctgtgtccccacccaaatctcatttgaattcccacatg-ttgtgggagggaccaggtgggaggtaattgaatcatgggggcaggtctttcctgtgatgttctcgtgatagtgaataagtctcacgagatttgacagctttataaggggaagttcccctgcacaagctctctttctgcctgccgccttccgtgt---aagacatgacctgctcctccttgccttccaccatgattgtgaggcct------ccacgtggaatcgtaagtccattaaacctccttttcttctcagactcaggtgtgtctttatcagcagcatgaaaacagactaatac i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1111269 335 + 81552678 CGTGGGGGGATGGtgatatagttggctgtgtccccacccaaatctcatttgaattcccacatg-ttgtgggagggaccccgtgggaggtacttgaatcatgggggcaggtctttcctgtgctgttctcatgataatgaataagtctcacgagatttgacagttttataagggggagttcccctgcacaagctctctttctgcctgccaccatccgtgtaagaagacatgacctgctcctccttgccttccaccatgattgtgaggcct------ccatgtgggaccataagtccgttaaacctctttttcttctcagacttgggtatgtctttatcagcag------------------c i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1441757 356 + 108979918 CGTGGTGGGATGGtgatatggttggctgtgtccccacccaaatctcagttgaattcccatgtg-ttgtgggagggacctggtgggaggtaattgaaccacagagacaggtctttcctgtgctgttctcatcatagtgaataagtctcacgagatttgacagttttataagggggagttcccctgcacatgctctctttctgcctgctgccatccaggt---aagacatgacctgctcctccttgccttccaccatgattgtggggcctccccagccacgtggaaccataagtccatcaaacctctttttcttcccagtcttggatatgtctttatcagcagcatgagaacagactaatac i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1414191 356 - 111193037 CGTGGTGGGATGGtgatatggttggctgtgtccccacccaaatctcagttgaattcccatgtg-ttgtgggagggacctggtgggaggtaattgaaccacagagacaggtctttcctgtgctgttctcatcatagtgaataagtctcacgagatttgacagttttataagggggagttcccctgcacatgctctctttctgcctgctgccatccaggt---aagacatgacctgctcctccttgccttccaccatgattgtggggcctccccagccacgtggaaccataagtccatcaaacctctttttcttcccagtcttggatatgtctttatcagcagcatgaaaacagactaatac i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1442109 355 + 3644372 CGTGGTGGGATGGtgatatggttggctgtgtccccacccaaatctcagttgaattcccatgtg-ttgtgggagggacctggtgggaggtaattgaaccacagagacaggtctttcctgtgctgttctcatcatagtgaataagtct-acgagatttgacagttttataagggggagttcccctgcacatgctctctttctgcctgctgccatccaggt---aagacatgacctgctcctccttgccttccaccatgattgtggggcctccccagccacgtggaaccataagtccatcaaacctctttttcttcccagtcttggatatgtctttatcagcagcatgaaaacagactaatac i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1396312 349 - 10304083 CGTGGTGGGATGGtgatatggttggctgtgtccccacccaaatctcatttgaattcctacgtg-ttgtgggagggacctggtgggaggtaactgaaccacagaggcaggtctttcctgtgctgttctcatcatagtgaataa-------gagatttgacagttttataagggggagttcccctgcacatgctctctttctgcctgctgccatccaggt---aagacacgacctgctcctccttgccttccaccatgattgtggggcttccccagccacgtagaacaataagtccattaaacctctttttcttcccagtcttggatatgtctttatcagcagcatgaaaacagactaatac i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1472838 356 - 107702431 CATGGCGGGATGGtgatatggttgactgtgtccccacccaaatctcatttgaattcctacgtg-ttgtgggagggacctggtgggaggtaactgaaccacaaaggcaggtctttcctgtgctgttctcatcagagtgaataagtctcacgagatttgacagttttataagggggagttcccctgcacatgctctctttctgcctgctgccatccatgt---aagacatgacctgctcctccttgccttccaccatgattgtggggcctccccagccacgtggaaccataagtccattaaacctcgttttcttcccagtcttgggtatgtctttatcagcagcatgaaaacagactaacac i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 956414 356 - 2200435 CGTGGTGGGATGGtgatatggttggctgtgtccccacccaaatctcatttgaattcctacgtg-ttgtgggagggacctggtgggaggtaactgaaccacggaggcaggtctttcctgtgctgttctcatcatagtgaataagtctcacgagatttgacagttttataagggggagttcccctgcacatgctctctttctgcctgctgccatccaggt---aagacacgacctgctcctccttgccttccaccatgattgtggggcctccccagccacgtagaaccataagtccattaaacctctttttcttcccagtcttggatatgtctttatcagcagcatgaaaacagactaatac i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1392570 354 - 13651311 CGTGGCGGGATGGtgatatggttggctgtgtccccacccaaatctcagttgaattcccatgtg-ttgtgggagggacctggtgggaggtaatcgaaccatggaggcagatctttcctgtgctgttctcatcatagtgaataagtctcacgagatttgacagtttcataagggggagttcccctgcacaagctctctt--tgcctgctgccatccatgt---aagacgtgacctgctcctccttgccttccaccacgattgtgaggcctccccagccacgtggaaccataagtccattaaacttctttttcttcccagtcttgggtatgtctttatcagcagcatgaaaacagactaatac i colAng1.NW_012118821v1 I 325 C 0 s calJac3.chr14 1387374 351 - 108792865 CAGGGTGGGATGGtgatatagctggctgtgtccccacccaaatctcatgtgaattcccatgggtttgtgggagggacctggtgggaggtaattgaatcatggggtcaggtctttcctgtgctgttctcatgatagta----agtctcatgagatctgacagttttataagggggagttcccctgcgcaagctctctttctgccctctgccatccatgt---aagacgtgacctgcttctctttgccttccaccatgatt-ggaggcctccccagccacatggaaccctaagtccattaaacctc-ttttcttcccagtcttgggttcatctttatcagcagcatgacaacagactaacac i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1232265 348 - 7082604 CAGGGTGGGATGGTGATACAGCCAgctgtgtccccacccaaatctcatttgaattcccatgggtttgtgggagggacctggtgggaggtgattgaatcatgggggcaggtctttcctgtgctgttctcatgatggtg----agtctcatgagatctgacagttttatctggggag--tcccctgcacaagctctctttctgccc-ctgccatccatgt---aagacgtgacctgctcctgttcgccttccaccatgattctgaggcctccccagccacatggaa-cctaagcccattaaacctc-ttttcttcccagtattgggttcgtctttatcagcagcatgacaacagactaatac i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1320778 351 + 1864846 CAGGGTGGGATGCtgatatagccagctgtgtccccacccaaatctcatttgaattcctgtgggtttgtgggagggacctggtgggaggtaaatgaatcatgggggcgggtctttcctgtgctg-tctcatgatggtg----agtctcaggagatctgacagttttatacgggggagttcccctgcgcaagctctcttcctgccctctgccatccatgt---aagatgtgacctgctcctccttgccttccaccatgactgtgaggcctccccagccacatggaaccataagtccattaaacctc-ttttcttcccagtcttgggttcatctttatcagcagtatgacaacagactaatac i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 125140 352 + 287728 CAGGGTGGGATGGCgatatagctggctgtgtccccacccaaatctcatttgaattcccatgggtttgtgggagggacctggtgggaggtaattgaatcatgggggcaggtctttcctgtgctgttctcatgatagta----agtctcatgagatctgacagttttataaggaggagttcccctgcacaagctctctttctgccctctgccatccatgg---aagacgtgacctgctcctctttgccttccaccatgattgtgaggcctccccagccacatgcaaccatgagtccattaaacctc-ttttcttcccagtcttgggttcgtctttatcagcagcatgacaacagactaacac i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1721489 2336 + 4416731 I a score=2001364.000000 s hg38.chr2_KI270774v1_alt 125266 216 + 223625 aGATGGAGTAGGG-GAGGGCTACTGAAGAAATG-AAGCCTCTCA---GCTACT-GGAAATAGATGCAATCAGGGTGGAATTACTCACGGACAGTCCTCCAGAGGCAGTGGGGTCATTGTGGAGATCTGTGTGCCACAACAGCCAGAAAACAAAGGGGCCACGAGCCACT-GTTTGCTCTGTGGTC-TAAATCAATGGACTATCTTACCACATGCAATGTTAGAC s panTro5.chr2A 1414452 216 + 111504155 aGACGGAGTAGGG-GAGGGCTACTGAAGAAATG-AAGCCTCTCA---GCTACT-GGAAATAGGTGCAGTCAGGGTGGAATTACTCACGGACAGTCCTCCAGAGGCAGTGGGGTCATTGTGGAGATCTGTGTGCCACAATAGCCAGAAAACAAAGGGGCCACGAGCCACT-GTTTGCTCTGTGGTC-TAAATCAATGGACTATCTTACCACATGCAATGTTAGAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1363215 216 + 114371477 aGACGGAGTAGGG-GAGGGCTACTGAAGAAATG-AAGCCTCTCA---GCTACT-GGAAATAGGTGCAGTCAGGGTGGAATTACTCACGGACAGTCCTCCAGAGGCAGTGGGGTCATTGTGGAGATCTGTGTGCCACAATAGCCAGAAAACAAAGGGGCCACGAGCCACT-GTTTGCTCTGTGGTC-TAAATCAATGGACTATCTTACCACATGCAATGTTAGAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1388618 215 + 1464242 aGATGGAGTA-GG-GAGGGCTACTGAAGAACTG-AAGCCTCTCA---GCTACT-GGAAATAGGTGCAGTCAGGGTGGAATTACTCACGGACACTCCTCCAGAGGCAGTGGGGTCATTGTGGAGATCTGTGTGCCACAATAGCCAGAAAACAAAGGGGCCACGGGCCACT-GTTTGCTCTGTCATC-TAAATCAATGGACTGTCTTACCACATGCAATGTTAGAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1111604 212 + 81552678 AGATGGAGTAGGG-GAGGGCTACTGAAGAACTG-AAGCCTCTCA---GCTGCT-GGAAATAGATGCAGTCGGGGTGGACTTACTCACGGCCAGTCCTCCAGAGGCAGTGGGGTCATTGTGGAGATCTGTGTGCCACAATAGCTAGAAAACAAAGGAGCCACGAGCCACT-GTTTACTCTGTCATC-TAAATCAATGGACTATCTTATCGCATGCAGTGTT---- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1442113 218 + 108979918 aGATGGAGTAGGG-GAGGGCTACTGAAGAATTG-AAGCCTCTTAGCTGCTGCT-GGAAGTAGATGCAGTCGAGGTGCAATTACTCATGGCCAGTCCTCCACAGGCAGCAGGGTCATTGTGAAGACCTGTGTGCCACAGTATCTAGAAAACAAAGGAGTCATGAGCCACT-GTTTGCT-TGTCGTC-TAAATCAATGGACTATCTTATCACATGCAATGTTAGAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1414547 218 - 111193037 aGATGGAGTAGGG-GAGGGCTACTGAAGAATTG-AAGCCTCTTAGCTGCTGCT-GGAAATAGATGCAGTCGAGGTGCAATTACTCATGGCCAGTCCTCCACAGGCAGCGGGGTCATTGTGAAGACCTGTGTGCCACAGTATCTAGAAAACAAAGGAGCCATGAGCCACT-GTTTGCT-TGTCGTC-TAAATCAATGGACTATCTTATCACATGCAATGTTAGAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1442464 218 + 3644372 aGATGGAGTAGGG-GAGGGCTACTGAAGAATTG-AAACCTCTTAGCTGCTGCT-GGAAATAGATGCAGTCGAGGTGCAATTACTCATGGCCAGTCCTCCACAGGCAGCGGGGTCATTGTGAAGACCTGTGTGCCACAGTATCTAGAAAACAAAGGAGCCATGAGCCACT-GTTTGCT-TGTCGTC-TAAATCAATGGACTATCTTATCACATGCAATGTTAGAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1396661 218 - 10304083 aGATGGAGTAGGG-GAGGGCTGCTGAAGAATTG-AAGCCTCTTAGCTGCTGCT-GGAAATAGATGCAGTCGAGGTGCAATTACTCATGGTTGGTCCTCCACAGGCAGCGGGGTCATTGTGAAGACCTGTGTGCCACAATATCTAGAAAACAAAGGAGCCCCGAGCCACT-GTTTGCC-TGTCGTC-TAAATCAATGGACTATCTTATCACATGCAATGTTAGAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1473194 213 - 107702431 aGATGGTGTAGGG-GAGGGCTACTGAAGAATTG-AAGCCTCTTA---GCTGCT-GGAAATAGATGCAGTCGGGGTGGAATTACTCATGGTCAGTCCTCCACAGGCAGCAGGGCCATTGTGAAGACCTGTGTGCCACAGTATCTAGAAAACAGAGGAGCCACGAGCCA---GTTTGCT-TGTCGTC-TAAATCAATGAACTATCTTATCACATGCAATGTTAGAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 956770 218 - 2200435 aGATGGAGTAGGG-GAGGGCTGCTGAAGAATTG-AAGCCTCTTAGCTGCTGCT-GGAAATAGATGCAGTCGAGGTGCAATTACTCATGGTTGGTCCTCCACAGGCAGCGGGGTCATTGTGAAGACCTGTGTGCCACAATATCTAGAAAACAAAGGAGCCCCGAGCCACT-GTTTGCT-TGTCGTC-TAAATCAATGGACTATCTTATCACATGCAATGTTAGAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1392924 215 - 13651311 aGATGGAGTCAGG-GAGGGCTACTGAAGAACGG-AAGCCTCTTA---GCTGCT-GGAAATAGATGCAGTCGGGGTGGAATTACTCATGGCCGGTCCTCCACAGGCAGCGGGGTCATTGTGAAGACCTGTGTGCCACAATATCTAGAAAACAAAGGAGCCACGAGCCACT-GTTTGCT-TGTCATC-TAAATCAGTGGATTATCTTATCACATGCAATGTTAGAC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1387725 217 - 108792865 aGATGAAGTAGGG-GAGGGCTGTTGAAGAACTG-AAGCCTCTTA---GCTGCT-GGAAACAGCTGCAGTTGGGGTGGAATCACTCATGGCCAGTCCTCCAGAGGCAGTGGGGTCATTGTGGAGATCTGTGTGACACAATATCTAGAAAGCAAAGGAGCCACTAGCCACTGGTTTGCTCTGTAGTC-TAAATCAGTGGAGTGTCTTATTACATGCAATGTTAGAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1232613 212 - 7082604 aGATGAAGTAGGG-GAGGGTTACTGAAGGACTG-AAGTCTCTCA---GCTGCT-GGAAACAGCTGCAGTCGGGGTGGAATCACTCATGGCCGGGCCTCCAGAGGCAGTGGGGTTGTTGTGGAGATCTGTGTGACACAATATCTAGAAAATAAAGGAGCCACGGGCCACT-GTTTGCTCTGTAGTC-TGAATCAGTGGACTGTCTTATCACATGCAATGTT---- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1321129 217 + 1864846 aGATGAAGTAGGG-GAGGGCTACTGAAGGACTG-AAGCCTCTCA---GCTGCT-GGAAACAGCTGCAGTCAGGGTGGAATCACTCGTGGCCAGGCCTCCAGAGGCAGTGGGGTCATTGTAGAGATCTGTGTGACACAGTATCTAGAAAACAAAGGTGCCACAAGCCACT-GTTTGCTCTGTACTCTTAAAGCAGTGGACTGTCTTATCACATGCAATGTTAGAC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 125492 216 + 287728 aGATGAAGTAGGG-GAGGGCTACTGAAGAACTG-AAGCCTCTTA---GCTGCT-GGCAACAGCTGCAGTTGGGGTGGAATCACTCCTGGCCAGTCCTCCGGAGGCAGGGGGGTCATTGTGGAGATCTGTGTGACACAACGTCCAGAAAACAAAGGGGCCACGAGCCACC-ATTTGCTCTGTAGTC-TAATCCAGTGGACCGTCCTATCACATGCAATGTGAGAC i aotNan1.NW_018513311v1 C 0 T 9442 s dasNov3.JH576208 1723825 183 + 4416731 AGATGGGATGGGGAAAAGGATTCTAAAAAAATACAGGCCACTTG---GCTTCCAGGTAACTGATGTAGTCCTTGCTGAAATAC-CATG--TGTGCCCTCAATAACA----GGTAATTCTGGAGCCCTGTTTG---CAATATCTTGGAAAAA---------CAAGCCACT-GTTTGCTCTGTGGGC-tatatcgatacatgtttttac----------------- i dasNov3.JH576208 I 2336 C 0 e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I a score=343119.000000 s hg38.chr2_KI270774v1_alt 125482 50 + 223625 AGTGTATTACATATGATTATTCATAAGCAGAAATACAAATATATATTATA s panTro5.chr2A 1414668 50 + 111504155 AGTGTATTACATATGATTATTCATAAGCAGAAATACAAATATATATTATA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1363431 50 + 114371477 AGTGTATTACATATGATTATTCATAAGCAGAAATACAAATATATATTATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1388833 50 + 1464242 AGTGTATTACATATGATTATTCATAAGCAGAAATACAAATATATATTATA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1111816 50 + 81552678 AGTGTATTACATATGATTATTCATAAGCAGAAATACAAAtatatattata i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1442331 50 + 108979918 AGTGTATTACATACGAATATTCATAAGCAGAAATATAAATATAGACTGTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1414765 50 - 111193037 AGTGTATTACATACGAATATTCATAAGCAGAAATATAAATATAGACTGTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1442682 50 + 3644372 AGTGTATTACATACGAATATTCATAAGCAGAAATATAAATATAGACTGTA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1396879 50 - 10304083 AGTGTATTACATATGAATATTCATAAGCAGAAATATAAATATAGACTATA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1473407 50 - 107702431 AGTGTATTATGTATGAATATTCATAAGCAGAAATACAAATATAGACTATA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 956988 50 - 2200435 AGTGTATTACATATGAATATTCATAAGCAGAAATATAAATATAGACTATA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1393139 50 - 13651311 AGTGTATTACATATGAATATTCATAAGCAGAAATACAAATATAGACTATA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1387942 38 - 108792865 AGTGTGTTACA------TAT------GCATAAATACAAACATATGTGATA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1232825 38 - 7082604 AGTGTATTACATATGATTAT------GCATAAATGCAAATATGT------ i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1321346 44 + 1864846 AGTGTATTACAGATGATTAT------GCATAAATACAAATATATGTGATA i cebCap1.NW_016107827v1 C 0 I 9 s dasNov3.JH576208 1724008 41 + 4416731 ------ttatttattaatttatatatttgaaaatat---tatcaattgta i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 125708 9442 + 287728 T e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I a score=120268.000000 s hg38.chr2_KI270774v1_alt 125532 19 + 223625 TACTGTAAGACAGTATTCA-------- s panTro5.chr2A 1414718 19 + 111504155 TACTGTAAGACAGTATTCA-------- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1363481 19 + 114371477 TACTGTAAGACAGTATTCA-------- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1388883 19 + 1464242 TGCTGTAAGACAGTATTCA-------- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1111866 19 + 81552678 tactgtaagatagtattaa-------- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1442381 19 + 108979918 TACTGTAAGATAGTATTCA-------- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1414815 19 - 111193037 TACTGTAAGATAGTATTCA-------- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1442732 19 + 3644372 TACTGTAAGATAGTATTCA-------- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1396929 19 - 10304083 TACTGTAAGATAGTATTCA-------- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1473457 19 - 107702431 TACTGTAAGATAGTATTCA-------- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 957038 19 - 2200435 TACTGTAAGATAGTATTCA-------- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1393189 19 - 13651311 TACTGTAAGATAGTATTCA-------- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1387980 19 - 108792865 TACTGTAAGACAGtataat-------- i calJac3.chr14 C 0 I 2 s saiBol1.JH378218 1232863 11 - 7082604 --------GATAGtataat-------- i saiBol1.JH378218 C 0 I 2 s dasNov3.JH576208 1724049 22 + 4416731 -----tgatataatatacaaatactaa i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 125708 9442 + 287728 T e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1321390 9 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I a score=525624.000000 s hg38.chr2_KI270774v1_alt 125551 70 + 223625 TTATAT-----------GATAAATA-TGATGAATTCACCTAGATACTTCATATAGAATTTGCCTTCAG-TTTTAGATTGATAC-- s panTro5.chr2A 1414737 70 + 111504155 TTATAT-----------GATAAATA-TGATGAATTCACCTAGATACTTCATATAGAATTTGCCTTCAG-TTTTAGATTGATAC-- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1363500 70 + 114371477 TTATAT-----------GATAAATA-TGATGAATTCACCTAGATACTTCATATAGAATTTGCCTTCAG-TTTTAGATTGATAC-- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1388902 70 + 1464242 TTATAT-----------GATAAATA-TGATGAATTCACCTAGATACTTCATATAGAATTTGCCTTCAG-TTTTACATTGATAC-- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1111885 81 + 81552678 ttatgtatatagtatTCATCAAATA-TGATGAATTCACATAGATACTTCATACAGAATTTGCCTTCAG-TTTTACATTGATAC-- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1442400 66 + 108979918 TTATAC---------------AATA-TGATTAATTCACCTAGATACTTCACATAGAATTTGCCTTCAG-TTTTACATTGATAC-- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1414834 66 - 111193037 TTATAC---------------AATA-TGATTAATTCACCTAGATACTTCACATAGAATTTGCCTTCAG-TTTTACATTGATAC-- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1442751 66 + 3644372 TTATAC---------------AATA-TGATTAATTCACCTAGATACTTCACATAGAATTTGCCTTCAG-TTTTACATTGATAC-- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1396948 66 - 10304083 TTATAC---------------AATA-TGATTAATTCACCTAGATACTTCACATAGAATTTGCCTTCAG-TTTTACATTGATAC-- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1473476 66 - 107702431 TTATAC---------------AATA-TGATTAATTCACTTAGATACTTCATACAGAATTTGCCTTCAG-TTTTACATTGATAC-- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 957057 66 - 2200435 TTATAC---------------AATA-TGATTAATTCACTTAGATACTTCACATAGAATTTGCCTTCAG-TTTTACATTGATGC-- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1393208 66 - 13651311 TTATAT---------------AATA-TGGTGAATTCACCTAGATACTTCATATAGAATTTGCCTTCAG-TTTTACATTGATAC-- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1388001 70 - 108792865 ttatat-----------gataaata-ttattaattCACCTAGATACTTTATGCAGAATTTGCCTTCAG-TTTTATGTTGATAT-- i calJac3.chr14 I 2 I 29 s saiBol1.JH378218 1232876 66 - 7082604 ttatat-----------gataaata-ttattaattCACC----TACTTTATTTAGAATTTGCCTTCAG-TTTTATGTTGATAT-- i saiBol1.JH378218 I 2 I 29 s cebCap1.NW_016107827v1 1321399 70 + 1864846 TTATAT-----------GATAAATA-TTATTAATTCACCTAGATTCTTTATGTAGAATTTGCCTTCAG-CTTTATGTTGATAT-- i cebCap1.NW_016107827v1 I 9 I 29 s dasNov3.JH576208 1724071 69 + 4416731 ttatat-----------gataaatattgatttatgcatgtg-----tttatgtataatttataaacaatttttatatatacacat i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 125708 9442 + 287728 T e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I a score=3624345.000000 s hg38.chr2_KI270774v1_alt 125621 378 + 223625 ATGTGATAAGAACTTCTCTGTGTGTTCTTGAGAAAGTGC-TCACATTC--------------CCATGCATaatggaaaggacattgtattttgaaatagaagacgaaattccagccacc-----actttgtcagttacaagctgcttagac------------ttcatgtcttgcttagtttctcaaattctctgcacctggaaactggcaaagatagtgatgctcatttctagggttgtcatgaggctgaagtgagacaat-gcagcagaaataatttgtgagcaata---atgatacaaaggtcagtgattgat-tatGTAAATAATGGCCACCTTTGAAGCCCCTTTCTTCAAAGAGTC--TGAGTCTTGATTCTTGAAGAGGTGTGATTTTTCTTTG-AAAAATTGCATTATTT s panTro5.chr2A 1414807 378 + 111504155 ATGTGATAAGAACTTCTCTGTGTGTTCTTGAGAAAGTGC-TCACATTC--------------CCATGCATaatggaaaggacattgtattttgaaatagaagatgaaattccagccacc-----actttgtcagttacaagctgcttagac------------ttcatgtcttgcttagtttctcaaattctctgcacctggaaactggcaaagatagtgatgctcatttctagggtggtcatgaggctgaagtgagacaat-gcagcagaaataatttgtgagcaata---atgatacaaaggtcagtgattgat-tatGTAAATAATGGCCACCTTTGAAGCCCCTTTCTTCAAAGAGTC--TGAGTCTTGATTCTTGAAGAGGTGTAATTTTTCTTTG-AAAAATTGCATTATTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1363570 378 + 114371477 ATGTGATAAGAACTTCTCTGTGTGTTCTTGAGAAAGTGC-TCACATTC--------------CCATGCATaatggaaaggacattgtattttgaaatagaaggtgaaattccagccacc-----actttgtcagttacaagctgcttagac------------ttcatgtcttgcttagtttctcaaattctctgcacctggaaactggcaaagatagtgatgctcatttctagggttgtcatgaggctgaagtgagacaat-gcagcagaaataatttgtgagcaata---atgatacaaaggtcagtgattgat-tatGTAAATAATGGCCACCTTTGAAGCCCCTTTCTTCAAAGAGTC--TGAGTCTTGATTCTTGAAGAGGTGTAATTTTTCTTTG-AAAAATTGCATTATTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1388972 378 + 1464242 ATGTGATAAGAACTTCTCTGTGTGTTCTTGAGAAAGTGC-TCACATTC--------------CCATGCATaatggaaaagccattgtattttgaaatagaacacgaaattccagccacc-----actttgtcagttacaagctgcttagac------------ttcatgtcttgcttagtttctcaaattctctgcacctggaaactggcaaagatattgatgctcatttctagggttgtcatgaggctgaagtgagacaat-gcagcagaaataatttgtgagcaata---atgctacaaaggtcagtgattgat-tatGTAAATAATGGCCACCTTTGAAGCCCCTTTCTTCAAAGAGTC--TGAGTCTTGATTCTTGAAGAGGTGTAATTTTTCTTTG-AAACATTGCATTATTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1111966 378 + 81552678 ATGTGATAAGAACTGCTCTGTGTGTTCTTGAGAAAGTGC-TCACATTC--------------CCATGCATaatggaaaagccattgtattttgaaatagaacacgaaattccagccacc-----actttgtcagttacaagctgcttagac------------ttcatgtcttgcttagattctcaaattctctgcatctgggaaatggcaaacatagtgatgctcatttctagggttgtcatgaggctgaagtgagaaaat-gcagcagaaatactttgtgaacaata---atgctgcaaaggtcagcgattgtt-TATGTAAATAATGGCCACCTTTGAAGCCCCTTTCTTCAAAGAGTC--TGAGTCTTGGTTCTTGAAGAGGTGTAATTTATCTTTG-AAAAATTGCATTATTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1442466 379 + 108979918 GTGTGATAATAACTGCTCTGTGTGTTCTTGAGAAAGTGC-TCACATTC--------------CTGTACATAATGGAAACGCCATCACATTTTGAAATAGAGCATGAGATTCTGGCCACC-----ACGTtgtcagttacaagctgcttagac------------ttcatgtcttgcttagattctcaaattctctgcatctggaaaatggcaaagatagtgatgcgcatttctagggttgtcatgaggctgaagtgagataatggcagcagaaatacttagtgagcaata---atgctgcaaaggtcagcgactgtt-TATGTAAATAATGGGCACCTTTGAAGCCCCTTTCTTCAAAGAGTC--TCAGTCTTGATTCTTGAAGAGGTGTAATTTATCTCTG-AAAAACTGCATTATTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1414900 379 - 111193037 GTGTGATAATAACTGCTCTGTGTGTTCTTGAGAAAGTGC-TCACATTC--------------CTGTACATAATGGAAACGCCATCACATTTTGAAATAGAGCATGAGATTCTGGCCACC-----ACGTtgtcagttacaagctgcttagac------------ttcatgtcttgcttagattctcaaattctctgcatctggaaaatggcaaagatagtgatgcgcatttctagggttgtcatgaggctgaagtgagataatggcagcagaaatacttagtgagcaata---atgctgcaaaggtcagcgactgtt-TATGTAAATAATGGGCACCTTTGAAGCCCCTTTCTTCAAAGAGTC--TCAGTCTTGATTCTTGAAGAGGTGTAATTTATCTCTG-AAAAACTGCATTATTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1442817 375 + 3644372 GTGTGATAATAACTGCTCTGTGTGTTCTTGAGAAAGTGC-TCACATTC--------------CTGTACATAATGGAAACGCCATCACATTTTGAAATAGAGCATGAGATTCTGGCCACC-----ACGTtgtcagttacaagctgcttagac------------ttcatgtcttgcttagattctcaaattctctgcatctggaaaatggcaaagatagtgatgcgcatttctagggttgtcatgaggctgaagtgagataatgGCAGCAGAAA----TAGTGAGCAATA---ATGCTGCAAAGGTCAGCGACTGTT-TATGTAAATAATGGGCACCTTTGAAGCCCCTTTCTTCAAAGAGTC--TCAGTCTTGATTCTTGAAGAGGTGTAATTTATCTCTG-AAAAACTGCATTATTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397014 381 - 10304083 GTGTGATAATAACTGCTCTGTGTGTTCTTGAGAAAGTGCGTCACATTC--------------CTGTGAGTCAtggaaaaaccatcgcattttgaaatagaacacgagattctggccacc-----acgttgtcagttacaagctgcttagac------------ttcatgtcttgcttagattctcaaattctctgcatctggaaaatggcaaagatagtgatgctcatttctagggttgtcatgaggctgaagtgagataatggcagcagaaatacttagtgagcaata---atgctacaaaggtcagcgactgtt-TATGTAAATAATGGCCACCTTTGAAGCCCCTTTCTTCAAAGAGTC--TCAGTCTTGATTCTTGAGGAGGTGTAATTTATCTCTGAAAAAATTGCATTATTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1473542 379 - 107702431 GTGTGATAATAACTGCTCTGTGTGTTCTTGAGAAAGTGC-TCACATTC--------------CTGTACATaatggaaacaccatcatattttgaaatagagcacgagattctggccccc-----acattgtcagttacaagctgcttagac------------ttcatgtcttgcttagattctcaaattctctgcatctggaaaatggcaaagatagtgatgctcatttctagggttgtcatgaggctgaagtgagataatggcagcagaaatacttagTGAGCAATA---ATAGTGCAAAGGTCAGCGACTGTT-TATGTAAATAATGGCCACCTTTGAAGCCCCTTTCTTCAAAGAGTC--TCAGTCTTGATTCTTGAAGAGGTGTAATTTATCTCTG-AGAAACTGCATTATTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 957123 381 - 2200435 GTGTGATAATAACTGCTCTGTGTGTTCTTGAGAAAGTGCGTCACATTC--------------CTGTGAGTCAtggaaaaaccatcgcattttgaaatagaacacgagattctggccacc-----acgttgtcagttacaagctgcttagac------------ttcatgtcttgcttagattctcaaattctctgcatctggaaaatggcaaagatagtgatgctcatttctagggttgtcatgaggctgaagtgagataatggcagcagaaatacttagtgagcaata---atgctacaaaggtcagtgactgtt-TATGTAAATAATGGCCACCTTTGAAGCCCCTTTCTTCAAAGAGTC--TCAGTCTTGATTCTTGAGGAGGTGTAATTTATCTCTGAAAAAATTGCATTATTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1393274 378 - 13651311 GTGTGATAATAACTGCTCTGTGTGTTCTTGAGAAAGTGC-TCACATTC--------------CTGTACATaatggaaaagccatcatattttgaaatagaacacgagattctggccacc-----acgttgtcagttacaagctgcttagac------------ttcatgtcttgcttagattctcaaattctctg-atctggaaaatggcaaagatagtgatgctcatttctagggttgtcatgaggctgaagtgagataatggcagcagaaatactttgtgagcaata---atgctacaaaggtcagcgactgtt-TATGTAAATAATGGCCACCTTGGAAGCCCCTTTCTTCAAAGAGTC--TCAGTCTTGATTCTTGAAGAGGTGTAATTTATCTCTG-AAAAACTGCATTATTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1388100 376 - 108792865 ATATGATAAGAACTTCTCTGTGTGTTCCTGAGAAAGTGC-TCACATTC--------------CTGTGCATAATGGAAACGCCATCCTATTTTGAAATAGAACACAAAAttccagccacc-----actctgccagttatcagctgcttggaa------------ttcatgtcttt----gattctccaattctctgcatctggaaaatggcaaagatagtgatgcttgttcacagagttgtcatgaggctgaagtgaaatcatggcagcagaagtactttgGGAGCAATG---ATGCTTCAAA-GTCAGCAACTGTT-TATGTAAACAATGTCCACCTTTGAAGCCCCTTTCTTCAAAGATTTTGTGAGTCTTGATTCTTGGTGAGGTGTAATTTATCTTTG-AAAAATCGCATTATTT i calJac3.chr14 I 29 C 0 s saiBol1.JH378218 1232971 376 - 7082604 ATGTGGTAAGAACTTCTCTGTGTGTTCTTGAGAAAGTGC-TCACATTC--------------CCATGCATaatggaaaagtcatcctgttttgaaatagaacacaagattctggccacc-----actctgccagttataagctgcttagaa------------ttcatgtcttt----gattctccaattctctgcatctggaaaatggcaaagatagtgaagtttgttcacagagttgtcatgaggctgaagtgaaatcatggcagcagaaatactctgggagcaata---aTCCTTCAAA-GTCAGCAACTGTT-TATGTAAATAATGTCCACCTTTGAAGGCCCTTTCTTCAAAGATTCTGTGAGTCTTGATTCTTGACGAGGTGTAATTTATCTTTG-AAAAATTGCATTATTT i saiBol1.JH378218 I 29 C 0 s cebCap1.NW_016107827v1 1321498 374 + 1864846 ATGTGATAA-AACTTCTCTGTGTGTTCTTGAGAAAGTGC-TCACATTC--------------CCgtgcataatggaaaagccatcctattctgaaatagaacacgaaattccagccacc-----actctgccagttataagccgcttagag------------ttcatgtcttt----gattctccaattctctgcatctggaaaatggcaaagatagtgatgcttgttcacagagctgtcatgaggctgaagtgaaatcatggcagcagaaatact-tgggagcaata---atgcttcaaa-gtcagcaactgtt-tatgtaaataatGTCCACCTTTGAAGCCCTTTTCTTCAAAGATTCTGTGAGTCTTGATCCTTGACGAGGTGTAATTTATCTTTG-AAAAATTGCATTATTT i cebCap1.NW_016107827v1 I 29 C 0 s aotNan1.NW_018513311v1 116266 376 + 287728 ATGTGATAAGAACTTCTCTGTGTGTTCTTGAGAAAGTGC-TCACATTC--------------CCgtgcataatggaaaagccatcctattttgaaatagaacacaagattccgaccagt-----actctgccagttaaaagctgcttagaa------------ttcatgtcttt----gactctccaattctctgcatctggaaaatggcaaagatagtgatgcttgttcacagagttgtcatgaggctgaagtgaaatcatggcagcagaaatactttgggagcaata---atgctttaaa-gtcagcaactgtt-tatgtaaataatGTCTGCCTTGGAAGCCGCTTTCTTCAAAGATTCTGTGAGTCTTGATTCTTGACGAGGTGTAATTTATCTTTG-AAAAATTGCACTATTT i aotNan1.NW_018513311v1 T 9442 C 0 s dasNov3.JH576208 1724140 374 + 4416731 atatGATTAAAATTACTATATATGTTCCTGAGAAAGTCC-TAAACATCTGAGCTATAGGCAATAATACATAAAAGAGAATTCATTATATTTTGAAATAtaaaacaagattctagtttcatatagacttcatctgttaccagctggttagactgagctattcagttcacctcttt----gatcactgatttcttt-catctgtcaaatggcaaagataataatatttacttacagggtgtttatgaggcttaagtgcaataatggaagcagaaatattttgtgagcaataagtattcttcagatgttagttattattattTCTAAATAATACCCAACTTTTTAACCCCTTGTTT---GGATTCTATGGTTCTTTGGTCT----------TAATT------------------------- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I a score=1007911.000000 s hg38.chr2_KI270774v1_alt 125999 102 + 223625 CTTgctgggcacgttggctcacgcctgtaaagacagcactttcggaggctgaggtcgggggatcgcttgagccc-aggagctcaagaccagcctgggcaacaa s panTro5.chr2A 1415185 102 + 111504155 CTTgctgggcacgttggctcacgcctgtaaggacagcactttcggaggctgaggtcgggggatcgcttgagccc-aggagctcaagaccagcctgggcaacaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1363948 102 + 114371477 CTTgctgggcacgttggctcacgcctgtaaggacagcactttcggaggctgaggtcgggggatcgcttgagccc-aggagctcaagaccagcctgggcaacaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389350 103 + 1464242 CTTgctgggcacgttagctcacgcctgtaatcccagcacttcgggaggctgaggtggggggatcacttgagcccgaggagcttaagaccagcctgggcaacaa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112344 102 + 81552678 CTTgctgggcatgttggctcatgcctgtaatcccagcactttgggaggctgaggtggggggatcgcttgagccc-aggaactcaagaccagcctgggcaacaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1442845 102 + 108979918 CTTgctgggcatgttggctcacgcctataatcccagcactttgggaggctgatgtgaggggatcgcatgagccc-aggagctcaagaccagcctgggcaacaa i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1415279 102 - 111193037 CTTgctgggcatgttggctcacgcctataatcccagcactttgggaggctgatgtgaggggatcgcatgagccc-aggagctcaagaccagcctgggcaacaa i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443192 101 + 3644372 CTTgctgggcatgttggctcacgcctataatcccagcactttgggaggctgatgtgaggggatcgcatgag-cc-aggagctcaagaccagcctgggcaacaa i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397395 102 - 10304083 CTTgctgggcatgttggctcacgcctgtaatcccagcactttgggaggctgaggtggggggattgcatgagccc-aggagctcaagaccagcctgggcaacaa i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1473921 102 - 107702431 CTTgctgggaatgttggctcacgcctgtagtcccagcactttgggaggcagaggtgggggaatcgcatgagccc-aggagctcaagaccagcctgggcaacaa i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 957504 102 - 2200435 CTTgctgggcatgttggctcatgcctgtaatcccagcactttgggaggctgaggtggggggatcgcatgagccc-aggagctcaagaccagcctgggcaacaa i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1393652 102 - 13651311 CTTgctgggcatgttggctcacgcctgtaatcccagcactttgggaggctgaggtggggggatcgcgtgagccc-aggagctcaagaccagcctgggcaacaa i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1388476 102 - 108792865 CCTgctaggcatggtggctcatgcctataatcccagcactttgggaggctgaaattgggggatcacttgagccc-aggagttcaagaccagcctaggcaacaa i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1233347 102 - 7082604 CCTgctgggcatggtggctcatgcctgtaatcccagcactttgggaggctgaagttgggggatcacttgagccc-aggagctcaagaccagcctgggcaacaa i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1321872 102 + 1864846 CCTgctgggcatggtggctcatgcctgtaatcccagcactttgggaggctgaagttgggggatcacttgagccc-aggaactcaagaccaacctgggcaacaa i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 116642 102 + 287728 CCTgctgggcgtggtggctcatgcctgtaatcccagcactttgggaggctgaagttgggggatcacttgagccc-aggagctcaagaccagcctgggcaacaa i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724514 0 + 4416731 C a score=150512.000000 s hg38.chr2_KI270774v1_alt 126101 31 + 223625 agcaatacctcatctct------------------aaaaca---aacaaac---------a s panTro5.chr2A 1415287 32 + 111504155 agcaatacctcatctct------------------aaaaca---aacaaaca--------a i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364050 32 + 114371477 agcaatacctcatctct------------------aaaaca---aacaaaca--------a i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389453 58 + 1464242 agcaatacctcatctctaaaacaaaaaacaaaacaaaaaca---aacaaacaaaaaaaaca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112446 50 + 81552678 agcaatacctcatctctaaaacaaaaaacaa----aaaaca---aacaaaaaaaaa----g i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1442947 27 + 108979918 agcaagacctcatctct------------------aaaatt---aaaa------------- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1415381 27 - 111193037 agcaagacctcatctct------------------aaaatt---aaaa------------- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443293 27 + 3644372 agcaagacctcatctct------------------aaaatt---taaa------------- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397497 28 - 10304083 agcaagacctcatctct------------------aaaatt---aaaa------------t i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1474023 28 - 107702431 agcaagacctcatctct------------------aaaatt---aaaa------------t i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 957606 27 - 2200435 agcaagacctcatctct------------------aaaatt---aaaa------------- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1393754 29 - 13651311 agcaagacctcatctct------------------aaaatt---aaaaa-----------a i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1388578 34 - 108792865 ggcaagacctcatctct------------------aaaacagacaacaaaCA--------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1233449 31 - 7082604 ggcaagacctcatctct------------------aaaaca---aacaaaca--------- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1321974 31 + 1864846 ggcaagacctcatctct------------------aaaaca---aacaaaca--------- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 116744 31 + 287728 ggcaagacctcatgtct------------------aaaaca---aacaaaca--------- i aotNan1.NW_018513311v1 C 0 I 73 s dasNov3.JH576208 1724514 24 + 4416731 AATCATAGCTTATCTTT------------------GAAATG---A---------------- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I a score=17402.000000 s hg38.chr2_KI270774v1_alt 126132 2 + 223625 aa s panTro5.chr2A 1415319 2 + 111504155 aA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364082 2 + 114371477 aA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389511 2 + 1464242 aa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112496 2 + 81552678 aa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1442974 2 + 108979918 aa i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1415408 2 - 111193037 aa i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443320 2 + 3644372 aa i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397525 2 - 10304083 aa i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1474051 2 - 107702431 aa i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 957633 2 - 2200435 aa i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1393783 2 - 13651311 aa i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1388612 2 - 108792865 GA i calJac3.chr14 C 0 I 3 s saiBol1.JH378218 1233480 2 - 7082604 aa i saiBol1.JH378218 C 0 I 3 s cebCap1.NW_016107827v1 1322005 2 + 1864846 aa i cebCap1.NW_016107827v1 C 0 I 6 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724538 0 + 4416731 C a score=61839.000000 s hg38.chr2_KI270774v1_alt 126134 15 + 223625 AAATTGTGTTATTTC s panTro5.chr2A 1415321 15 + 111504155 AAATTGTGTTATTTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364084 15 + 114371477 AAATTGTGTTATTTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389513 15 + 1464242 aaaTTGTATTATTTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112498 15 + 81552678 aaaTCGTGTTATTTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1442976 15 + 108979918 aaaCTATGGTATTTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1415410 15 - 111193037 aaaCTATGGTATTTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443322 15 + 3644372 aaaCTATGGTATTTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397527 15 - 10304083 aaaTTATGATATTTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1474053 15 - 107702431 aaaTTATGATATTTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 957635 15 - 2200435 aaaTTATGGTATTTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1393785 15 - 13651311 aaaTTATGATATTTC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1388617 3 - 108792865 AAA------------ i calJac3.chr14 I 3 C 0 s saiBol1.JH378218 1233485 3 - 7082604 AAA------------ i saiBol1.JH378218 I 3 C 0 s dasNov3.JH576208 1724538 12 + 4416731 ---TTACATTATATT i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322007 6 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I a score=379315.000000 s hg38.chr2_KI270774v1_alt 126149 43 + 223625 TTGAGTTTTGATCTGATGAACTACTGCAGTAAACCACTGTGTC s panTro5.chr2A 1415336 43 + 111504155 TTGAGTTTTGATCTGATGAACTACTGCAGTAAACCACTGTGTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364099 43 + 114371477 TTGAGTTTTGATCTGATGAACTACTGCAGTAAACCACTGTGTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389528 43 + 1464242 TTGAGTTTTGATCTGATGAACTACTGCGGTAAACCACTGTGTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112513 43 + 81552678 TTGAGTTTTGATCTGATGAACTACTGCAGTAAACCACTGTGTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1442991 43 + 108979918 CTGAGTTTTGACGTGATGAACTACTGCGGTAAACCGCTGTGTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1415425 43 - 111193037 CTGAGTTTTGACGTGATGAACTACTGCGGTAAACCGCTGTGTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443337 43 + 3644372 CTGAGTTTTGACGTGATGAACTACTGCGGTAAACCGCTGTGTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397542 43 - 10304083 CTGAGTTTTGACCTGCTGAACTACTGCGGTAAACCGCTGTGTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1474068 43 - 107702431 CTGAGTTTTGACCTGATGAACTACTGCGGTAAACCGCTGTGTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 957650 43 - 2200435 CTGAGTTTTGACGTGATGAACTACTGCGGTAAACCGCTGTGTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1393800 43 - 13651311 CTGAGTTTTGACCTGATGAACTACTTCAGTAAATCACTGTGTC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1388620 43 - 108792865 TTGAGTTTTGATCTGAGGAACTGCTTCAGTAAAGTACTGGGTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1233488 43 - 7082604 TTGAGTTTTGATCTGAGGAACTGCTGCAGTAAAGTACTGTGTC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1322013 43 + 1864846 TTGAGTTTTGATCTGAGGAACTACTGCGGTAAAGTACTATGTC i cebCap1.NW_016107827v1 I 6 C 0 s dasNov3.JH576208 1724550 43 + 4416731 TTGAATTAGAGTCTGAAAGATCACAGCAATAAACCACTGTGTC i dasNov3.JH576208 C 0 I 22 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I a score=38402.000000 s hg38.chr2_KI270774v1_alt 126192 4 + 223625 TCAC s panTro5.chr2A 1415379 4 + 111504155 TCAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364142 4 + 114371477 TCAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389571 4 + 1464242 TCAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112556 4 + 81552678 TCAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1443034 4 + 108979918 TCAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1415468 4 - 111193037 TCAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443380 4 + 3644372 TCAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397585 4 - 10304083 TCAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1474111 4 - 107702431 TCAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 957693 4 - 2200435 TCAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1393843 4 - 13651311 TCAC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1388663 4 - 108792865 TCGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1233531 4 - 7082604 TCAC i saiBol1.JH378218 C 0 T 1953 s cebCap1.NW_016107827v1 1322056 4 + 1864846 TCAC i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I a score=8281.000000 s hg38.chr2_KI270774v1_alt 126196 1 + 223625 A s panTro5.chr2A 1415383 1 + 111504155 A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364146 1 + 114371477 A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389575 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112560 1 + 81552678 A i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1443038 1 + 108979918 A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1415472 1 - 111193037 A i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443384 1 + 3644372 A i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397589 1 - 10304083 A i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1474115 1 - 107702431 A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 957697 1 - 2200435 A i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1393847 1 - 13651311 A i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1388667 1 - 108792865 A i calJac3.chr14 C 0 I 113 s cebCap1.NW_016107827v1 1322060 1 + 1864846 A i cebCap1.NW_016107827v1 C 0 I 1 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1233535 1953 - 7082604 T e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I a score=91913.000000 s hg38.chr2_KI270774v1_alt 126197 18 + 223625 GTGTTGGAAGGGAATGGA s panTro5.chr2A 1415384 18 + 111504155 GTGTTGGAAGGGAATGGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364147 18 + 114371477 GTGTTGGAAGGGAATGGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389576 18 + 1464242 GTGTTGGAAGGGAATGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112561 18 + 81552678 ATGTTGTAAGTGAATGGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1443039 18 + 108979918 GTGTTGTAAGCGAATGGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1415473 18 - 111193037 GTGTTGTAAGCGAATGGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443385 18 + 3644372 GTGTTGTAAGCGAATGGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397590 18 - 10304083 GTGTTGTAAGCAAATGGA i cerAty1.NW_012000820v1 C 0 T 6 s chlSab2.chr14 1474116 18 - 107702431 GTGTTGTAAGCGAATGGA i chlSab2.chr14 C 0 T 2705 s manLeu1.NW_012103754v1 957698 18 - 2200435 GTGTTGTAAGCGAATGGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1393848 18 - 13651311 GTGTTGTAAGCGAATGGC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1233535 1953 - 7082604 T e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=9000.000000 s hg38.chr2_KI270774v1_alt 126215 2 + 223625 GC s panTro5.chr2A 1415402 2 + 111504155 GC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364165 2 + 114371477 GC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389594 2 + 1464242 GC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112579 2 + 81552678 GC i nomLeu3.chr19 C 0 T 2110 s rheMac8.chr13 1443057 2 + 108979918 GC i rheMac8.chr13 C 0 T 20 s macFas5.chr13 1415491 2 - 111193037 GC i macFas5.chr13 C 0 T 2649 s macNem1.NW_012011978v1 1443403 2 + 3644372 GC i macNem1.NW_012011978v1 C 0 T 20 s manLeu1.NW_012103754v1 957716 2 - 2200435 GC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1393866 2 - 13651311 GC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1233535 1953 - 7082604 T e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e chlSab2.chr14 1474134 2705 - 107702431 T e cerAty1.NW_012000820v1 1397608 6 - 10304083 T a score=14994.000000 s hg38.chr2_KI270774v1_alt 126217 12 + 223625 CGGCTCCTTCTT s panTro5.chr2A 1415404 12 + 111504155 CGGCTCCTTCTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364167 12 + 114371477 CGGCTCCTTCTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389596 12 + 1464242 CGGCTCCTTCCT i gorGor5.CYUI01015607v1 C 0 T 32 s manLeu1.NW_012103754v1 957718 12 - 2200435 AGGCTCCTTCTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1393868 12 - 13651311 AGGCTCCTTCTT i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1233535 1953 - 7082604 T e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e chlSab2.chr14 1474134 2705 - 107702431 T e cerAty1.NW_012000820v1 1397608 6 - 10304083 T e macNem1.NW_012011978v1 1443405 20 + 3644372 T e macFas5.chr13 1415493 2649 - 111193037 T e rheMac8.chr13 1443059 20 + 108979918 T e nomLeu3.chr19 1112581 2110 + 81552678 T a score=1000.000000 s hg38.chr2_KI270774v1_alt 126229 1 + 223625 G s panTro5.chr2A 1415416 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364179 1 + 114371477 G i panPan2.chr2A C 0 C 0 s manLeu1.NW_012103754v1 957730 1 - 2200435 G i manLeu1.NW_012103754v1 C 0 T 2270 s colAng1.NW_012118821v1 1393880 1 - 13651311 G i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1233535 1953 - 7082604 T e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e chlSab2.chr14 1474134 2705 - 107702431 T e cerAty1.NW_012000820v1 1397608 6 - 10304083 T e macNem1.NW_012011978v1 1443405 20 + 3644372 T e macFas5.chr13 1415493 2649 - 111193037 T e rheMac8.chr13 1443059 20 + 108979918 T e nomLeu3.chr19 1112581 2110 + 81552678 T e gorGor5.CYUI01015607v1 1389608 32 + 1464242 T a score=1092.000000 s hg38.chr2_KI270774v1_alt 126230 2 + 223625 TT s panTro5.chr2A 1415417 2 + 111504155 TT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364180 2 + 114371477 TT i panPan2.chr2A C 0 C 0 s colAng1.NW_012118821v1 1393881 2 - 13651311 TT i colAng1.NW_012118821v1 C 0 I 847 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1233535 1953 - 7082604 T e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e chlSab2.chr14 1474134 2705 - 107702431 T e cerAty1.NW_012000820v1 1397608 6 - 10304083 T e macNem1.NW_012011978v1 1443405 20 + 3644372 T e macFas5.chr13 1415493 2649 - 111193037 T e rheMac8.chr13 1443059 20 + 108979918 T e nomLeu3.chr19 1112581 2110 + 81552678 T e gorGor5.CYUI01015607v1 1389608 32 + 1464242 T a score=27876.000000 s hg38.chr2_KI270774v1_alt 126232 31 + 223625 GTATGGTGTAGGCAATGCCACAGGAGGTACC s panTro5.chr2A 1415419 31 + 111504155 GTATGGTGTAGGCAGTGCCGCAGGAGGTACC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364182 31 + 114371477 GTATGGTGTAGGCAATGCCGCAGGAGGTACC i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1110471 31 + 81552678 GTATGATGTGGTCAGTGCCACAGGAACTACC i nomLeu3.chr19 T 2110 C 0 s macFas5.chr13 1412844 31 - 111193037 GTACGATGTGGTCAATGCCACACCACCTACC i macFas5.chr13 T 2649 C 0 s saiBol1.JH378218 1231582 31 - 7082604 GTATAGTGTGGTGAGTGCTGCAGAAGGCACT i saiBol1.JH378218 T 1953 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1393883 847 - 13651311 I e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e chlSab2.chr14 1474134 2705 - 107702431 T e cerAty1.NW_012000820v1 1397608 6 - 10304083 T e macNem1.NW_012011978v1 1443405 20 + 3644372 T e rheMac8.chr13 1443059 20 + 108979918 T e gorGor5.CYUI01015607v1 1389608 32 + 1464242 T a score=6835.000000 s hg38.chr2_KI270774v1_alt 126263 6 + 223625 GTGTTT s panTro5.chr2A 1415450 6 + 111504155 GTGTTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364213 6 + 114371477 GTGTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389576 6 + 1464242 GTGTTG i gorGor5.CYUI01015607v1 T 32 C 0 s nomLeu3.chr19 1110502 6 + 81552678 ATTTTG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1412875 6 - 111193037 ATGTTG i macFas5.chr13 C 0 C 0 s saiBol1.JH378218 1231613 6 - 7082604 GTGTTG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1393883 847 - 13651311 I e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e chlSab2.chr14 1474134 2705 - 107702431 T e cerAty1.NW_012000820v1 1397608 6 - 10304083 T e macNem1.NW_012011978v1 1443405 20 + 3644372 T e rheMac8.chr13 1443059 20 + 108979918 T a score=13881.000000 s hg38.chr2_KI270774v1_alt 126269 6 + 223625 GAAGGG s panTro5.chr2A 1415456 6 + 111504155 GAAGGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364219 6 + 114371477 GAAGGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389582 6 + 1464242 GAAGGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110508 6 + 81552678 GAAGGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1412881 6 - 111193037 GAAGGG i macFas5.chr13 C 0 C 0 s chlSab2.chr14 1471429 6 - 107702431 GAAGGG i chlSab2.chr14 T 2705 C 0 s saiBol1.JH378218 1231619 6 - 7082604 GAATAG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1393883 847 - 13651311 I e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e cerAty1.NW_012000820v1 1397608 6 - 10304083 T e macNem1.NW_012011978v1 1443405 20 + 3644372 T e rheMac8.chr13 1443059 20 + 108979918 T a score=39088.000000 s hg38.chr2_KI270774v1_alt 126275 14 + 223625 AATGGGGCAGGCTC s panTro5.chr2A 1415462 14 + 111504155 AATGGGGCAGGCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364225 14 + 114371477 AATGGGGCAGGCTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389588 14 + 1464242 AATGGAGCCGGCTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110514 14 + 81552678 AATGGAGCAGGCTC i nomLeu3.chr19 C 0 T 67 s macFas5.chr13 1412887 14 - 111193037 AATGGGGCGGGTTC i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397602 14 - 10304083 AATGGAGCAGGCTC i cerAty1.NW_012000820v1 T 6 C 0 s chlSab2.chr14 1471435 14 - 107702431 AATAGGGCAGGGTC i chlSab2.chr14 C 0 C 0 s saiBol1.JH378218 1231625 14 - 7082604 AATGGGACAGGCTC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1393883 847 - 13651311 I e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e macNem1.NW_012011978v1 1443405 20 + 3644372 T e rheMac8.chr13 1443059 20 + 108979918 T a score=3600.000000 s hg38.chr2_KI270774v1_alt 126289 1 + 223625 C s panTro5.chr2A 1415476 1 + 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364239 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389602 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110461 1 + 81552678 C i nomLeu3.chr19 T 67 C 0 s macFas5.chr13 1412901 1 - 111193037 C i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397616 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471449 1 - 107702431 C i chlSab2.chr14 C 0 C 0 s saiBol1.JH378218 1231639 1 - 7082604 C i saiBol1.JH378218 C 0 T 41 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1393883 847 - 13651311 I e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e macNem1.NW_012011978v1 1443405 20 + 3644372 T e rheMac8.chr13 1443059 20 + 108979918 T a score=50814.000000 s hg38.chr2_KI270774v1_alt 126290 26 + 223625 TTCTTGTTTGTATGATCCAGTCATTA s panTro5.chr2A 1415477 26 + 111504155 TTCTTGTTTGTATGATCCAGTCATTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364240 26 + 114371477 TTCTTGTTTGTATGATCCAGTCATTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389603 26 + 1464242 TTCCTGTTTGTATGATCCAGTCATTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110462 26 + 81552678 TTCTTGTTTGTATGATGTGGTCAGTG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1412902 26 - 111193037 TTCTTGTTTGTATGATCTACTCACTG i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397617 26 - 10304083 TTCTTGCTTGTATGGTGTAGTCCGTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471450 26 - 107702431 TTCTTGTTTGTATGGTGTAGTCAGTA i chlSab2.chr14 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1231640 41 - 7082604 T e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1393883 847 - 13651311 I e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e macNem1.NW_012011978v1 1443405 20 + 3644372 T e rheMac8.chr13 1443059 20 + 108979918 T a score=21774.000000 s hg38.chr2_KI270774v1_alt 126316 11 + 223625 CTGCAGGAGGC s panTro5.chr2A 1415503 11 + 111504155 CTGCAGGAGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364266 11 + 114371477 CTGCAGGAGTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389629 11 + 1464242 CTGCAGGAGGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110488 11 + 81552678 CCACAGGAACT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1412928 11 - 111193037 CCGCAGGAACT i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397643 11 - 10304083 AAGCAGGAACT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471476 11 - 107702431 CTGCAGGAGGC i chlSab2.chr14 C 0 C 0 s saiBol1.JH378218 1231599 11 - 7082604 CTGCAGAAGGC i saiBol1.JH378218 T 41 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1393883 847 - 13651311 I e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e macNem1.NW_012011978v1 1443405 20 + 3644372 T e rheMac8.chr13 1443059 20 + 108979918 T a score=10990.000000 s hg38.chr2_KI270774v1_alt 126327 3 + 223625 ACC s panTro5.chr2A 1415514 3 + 111504155 ACC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364277 3 + 114371477 ACC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389640 3 + 1464242 ACC i gorGor5.CYUI01015607v1 C 0 T 67 s nomLeu3.chr19 1110499 3 + 81552678 ACC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1412939 3 - 111193037 ACC i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397654 3 - 10304083 ACC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471487 3 - 107702431 ACT i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1394730 3 - 13651311 ACC i colAng1.NW_012118821v1 I 847 C 0 s saiBol1.JH378218 1231610 3 - 7082604 ACT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e macNem1.NW_012011978v1 1443405 20 + 3644372 T e rheMac8.chr13 1443059 20 + 108979918 T a score=82970.000000 s hg38.chr2_KI270774v1_alt 126330 18 + 223625 GTGTTGGAAGGGAGTGGG s panTro5.chr2A 1415517 18 + 111504155 GTGTTGGAAGGGAATGGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364280 18 + 114371477 GTGTTGGAAGGGAATGGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389576 18 + 1464242 GTGTTGGAAGGGAATGGA i gorGor5.CYUI01015607v1 T 67 C 0 s nomLeu3.chr19 1110502 18 + 81552678 ATTTTGGAAGGGAATGGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1443039 18 + 108979918 GTGTTGTAAGCGAATGGA i rheMac8.chr13 T 20 C 0 s macFas5.chr13 1412942 18 - 111193037 ATGTTGTAAGCGAATGGA i macFas5.chr13 C 0 I 134 s macNem1.NW_012011978v1 1443385 18 + 3644372 GTGTTGTAAGCGAATGGA i macNem1.NW_012011978v1 T 20 C 0 s cerAty1.NW_012000820v1 1397657 18 - 10304083 ATGTTGGAAGGGAATGGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471490 18 - 107702431 ACGTTGGAAGGGAATAGG i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1394733 18 - 13651311 ATGTTGGAAGGGAATGGG i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231613 18 - 7082604 GTGTTGGAATAGAATGGG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e manLeu1.NW_012103754v1 957731 2270 - 2200435 T a score=58047.000000 s hg38.chr2_KI270774v1_alt 126348 10 + 223625 GCAGGCTCCT s panTro5.chr2A 1415535 10 + 111504155 GCAGGCTCCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364298 10 + 114371477 GCAGGCTCCT i panPan2.chr2A C 0 T 2582 s gorGor5.CYUI01015607v1 1389594 10 + 1464242 GCCGGCTCCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110520 10 + 81552678 GCAGGCTCCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1443057 10 + 108979918 GCAGGCTCCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413094 10 - 111193037 GCAGGCTCCT i macFas5.chr13 I 134 C 0 s macNem1.NW_012011978v1 1443403 10 + 3644372 GCAGGCTCCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397675 10 - 10304083 GCAGGCTCCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471508 10 - 107702431 GCAGGGTCCT i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1394751 10 - 13651311 GCAGGCTCCT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231631 10 - 7082604 ACAGGCTCCT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e manLeu1.NW_012103754v1 957731 2270 - 2200435 T a score=139627.000000 s hg38.chr2_KI270774v1_alt 126358 35 + 223625 TCTTGTTTGTATGACCCAGTCATTGCTGCAGAAGG s panTro5.chr2A 1415545 35 + 111504155 TCTTGTTTGTATGATCCAGTCATTGCTGCAGGAGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361726 35 + 114371477 TCTTGTTTGTATGATCTAGTCATTGCCGCGGGAGG i panPan2.chr2A T 2582 C 0 s gorGor5.CYUI01015607v1 1389604 35 + 1464242 TCCTGTTTGTATGATCCAGTCATTGCTGCAGGAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110530 35 + 81552678 TCTTGTTTATATGGTGTAGTCATTGCCACAGGAGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1443067 35 + 108979918 TCTTGTTTGTATGGTGTAGTCCATGAAGCAGGAAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413104 35 - 111193037 TCCTGTTTTTATGGTGTAGTCAGTGCCACAGGATG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443413 35 + 3644372 TCTTGTTTGTATGGTGTAGTCCATGAAGCAGGAAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397685 35 - 10304083 TCGTGCTTGTATGGTGTAGTCCGTGAAGCAGGAAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471518 35 - 107702431 TCTTGTTTGTATGGTGTAGTCAGTGCCGCAGGAGC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1394761 35 - 13651311 TCTTGCTTGTATGATCTAGTCATTGCTGTAGGAGG i colAng1.NW_012118821v1 C 0 T 67 s saiBol1.JH378218 1231641 35 - 7082604 TCTTGTTTGCATAATGTGGTCAGTGCTGCAGGAGC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e manLeu1.NW_012103754v1 957731 2270 - 2200435 T a score=20781.000000 s hg38.chr2_KI270774v1_alt 126393 5 + 223625 TACCA s panTro5.chr2A 1415580 5 + 111504155 CACCG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361761 5 + 114371477 CACTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389639 5 + 1464242 TACCA i gorGor5.CYUI01015607v1 C 0 T 67 s nomLeu3.chr19 1110565 5 + 81552678 CACTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1443102 5 + 108979918 TACCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413139 5 - 111193037 TACCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443448 5 + 3644372 TACCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397720 5 - 10304083 TACCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471553 5 - 107702431 TACCA i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1394729 5 - 13651311 TACCA i colAng1.NW_012118821v1 T 67 C 0 s saiBol1.JH378218 1231676 5 - 7082604 TACAG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e manLeu1.NW_012103754v1 957731 2270 - 2200435 T a score=154249.000000 s hg38.chr2_KI270774v1_alt 126398 28 + 223625 TGTTGGAAGGGAATGGGGCAGGCTCCTT s panTro5.chr2A 1415585 28 + 111504155 TGTTGGAAGGGAGTGGGGCAGGCTCCTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361766 28 + 114371477 TGTTGGAAGGGAATAGGGCAGGGTCCTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389577 28 + 1464242 TGTTGGAAGGGAATGGAGCCGGCTCCTT i gorGor5.CYUI01015607v1 T 67 C 0 s nomLeu3.chr19 1110570 28 + 81552678 TGTTGGAAGGGAATAGGGCAGGGTCCTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1443107 28 + 108979918 TGTTGGAAGGGAATGGGGCAGGCTCCTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413144 28 - 111193037 TGTTGTAAGCGAATGGAGCAGGCTCCTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443453 28 + 3644372 TGTTGGAAGGGAATGGGGCAGGCTCCTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397725 28 - 10304083 TGTTGGAAGGGAATGGGGCAGGCTCCTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471558 28 - 107702431 TGTTGGAAGGGAACGGGGCAGGTTCCTT i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1394734 28 - 13651311 TGTTGGAAGGGAATGGGGCAGGCTCCTT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231681 28 - 7082604 TGTTGGAAGAAAATGGGGCAGGCTCCTT i saiBol1.JH378218 C 0 T 67 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e manLeu1.NW_012103754v1 957731 2270 - 2200435 T a score=17436.000000 s hg38.chr2_KI270774v1_alt 126426 4 + 223625 CTTG s panTro5.chr2A 1415613 4 + 111504155 CTTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361794 4 + 114371477 CTTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389605 4 + 1464242 CCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110598 4 + 81552678 CCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1443135 4 + 108979918 CGTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413172 4 - 111193037 CCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443481 4 + 3644372 CGTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397753 4 - 10304083 CGTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471586 4 - 107702431 CTTG i chlSab2.chr14 C 0 T 3661 s colAng1.NW_012118821v1 1394762 4 - 13651311 CTTG i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231642 4 - 7082604 CTTG i saiBol1.JH378218 T 67 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e manLeu1.NW_012103754v1 957731 2270 - 2200435 T a score=42287.000000 s hg38.chr2_KI270774v1_alt 126430 13 + 223625 TTTGTATGATCCA s panTro5.chr2A 1415617 13 + 111504155 TTTGTATGATCCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361798 13 + 114371477 TTTCCATGGTGTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389609 13 + 1464242 TTTGTATGATCCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110602 13 + 81552678 TTTGTATGGTGTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1443139 13 + 108979918 CTTGTATGATCTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413176 13 - 111193037 TTTTTATGGTGTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443485 13 + 3644372 CTTGTATGATCTA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397757 13 - 10304083 CTTGTATGATCTA i cerAty1.NW_012000820v1 C 0 C 0 s colAng1.NW_012118821v1 1394766 13 - 13651311 CTTGTATGATCTA i colAng1.NW_012118821v1 C 0 T 27 s saiBol1.JH378218 1231646 13 - 7082604 TTTGCATAATGTG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e chlSab2.chr14 1471590 3661 - 107702431 T a score=96961.000000 s hg38.chr2_KI270774v1_alt 126443 29 + 223625 GTCATTGTTGCAGGAGGCACCGTGTTGGA s panTro5.chr2A 1415630 29 + 111504155 GTCATTGCTGCAGGAGGCACCGTGTTGGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361811 29 + 114371477 GTCAGTGCCACAGGAGGCACTATGTTGGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389622 29 + 1464242 GTCATTGCTGCAGGAGGTACCATGTTGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110615 29 + 81552678 GTCAGTGCCGCAGGAGCCACCATGTTGGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1443152 29 + 108979918 GTCATTGCTGCAGGAGGTATCATGTTGGA i rheMac8.chr13 C 0 T 2751 s macFas5.chr13 1413189 29 - 111193037 GTCAGTCCCGCAGGAGGCACTACGTTGGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443498 29 + 3644372 GTCATTGCTGCAGGAGGTATCATGTTGGA i macNem1.NW_012011978v1 C 0 T 141 s cerAty1.NW_012000820v1 1397770 29 - 10304083 GTCATTGCTGCAGGAGGTACCATGTTGGA i cerAty1.NW_012000820v1 C 0 T 134 s saiBol1.JH378218 1231659 29 - 7082604 GTCAGTGCTGCAGGAGCTACAGTGTTGGA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1394779 27 - 13651311 T e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e chlSab2.chr14 1471590 3661 - 107702431 T a score=15240.000000 s hg38.chr2_KI270774v1_alt 126472 7 + 223625 AGGGAAT s panTro5.chr2A 1415659 7 + 111504155 AGGGAAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361840 7 + 114371477 AGAGAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389651 7 + 1464242 AGGGAAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110644 7 + 81552678 AGGGAAT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1413218 7 - 111193037 AGGGAAC i macFas5.chr13 C 0 T 265 s cerAty1.NW_012000820v1 1397665 7 - 10304083 AGGGAAT i cerAty1.NW_012000820v1 T 134 C 0 s saiBol1.JH378218 1231688 7 - 7082604 AGAAAAT i saiBol1.JH378218 C 0 T 130 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1394779 27 - 13651311 T e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e chlSab2.chr14 1471590 3661 - 107702431 T e macNem1.NW_012011978v1 1443527 141 + 3644372 T e rheMac8.chr13 1443181 2751 + 108979918 T a score=3000.000000 s hg38.chr2_KI270774v1_alt 126479 2 + 223625 GG s panTro5.chr2A 1415666 2 + 111504155 GG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361847 2 + 114371477 GG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389658 2 + 1464242 GG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110651 2 + 81552678 GG i nomLeu3.chr19 C 0 C 0 s cerAty1.NW_012000820v1 1397672 2 - 10304083 GG i cerAty1.NW_012000820v1 C 0 I 1 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1231695 130 - 7082604 T e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1394779 27 - 13651311 T e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e chlSab2.chr14 1471590 3661 - 107702431 T e macNem1.NW_012011978v1 1443527 141 + 3644372 T e macFas5.chr13 1413225 265 - 111193037 T e rheMac8.chr13 1443181 2751 + 108979918 T a score=2100.000000 s hg38.chr2_KI270774v1_alt 126481 1 + 223625 G s panTro5.chr2A 1415668 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361849 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389660 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110653 1 + 81552678 G i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1412960 1 - 111193037 G i macFas5.chr13 T 265 C 0 s cerAty1.NW_012000820v1 1397675 1 - 10304083 G i cerAty1.NW_012000820v1 I 1 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1231695 130 - 7082604 T e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1394779 27 - 13651311 T e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e chlSab2.chr14 1471590 3661 - 107702431 T e macNem1.NW_012011978v1 1443527 141 + 3644372 T e rheMac8.chr13 1443181 2751 + 108979918 T a score=3913.000000 s hg38.chr2_KI270774v1_alt 126482 2 + 223625 CA s panTro5.chr2A 1415669 2 + 111504155 CA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361850 2 + 114371477 CA i panPan2.chr2A C 0 I 3262 s gorGor5.CYUI01015607v1 1389661 2 + 1464242 CA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110654 2 + 81552678 CC i nomLeu3.chr19 C 0 I 1 s macFas5.chr13 1412961 2 - 111193037 CA i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397676 2 - 10304083 CA i cerAty1.NW_012000820v1 C 0 C 0 s saiBol1.JH378218 1231565 2 - 7082604 CA i saiBol1.JH378218 T 130 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1394779 27 - 13651311 T e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e chlSab2.chr14 1471590 3661 - 107702431 T e macNem1.NW_012011978v1 1443527 141 + 3644372 T e rheMac8.chr13 1443181 2751 + 108979918 T a score=54204.000000 s hg38.chr2_KI270774v1_alt 126484 30 + 223625 GGCTCCTTCTTGTTTGTATGATCCAGTCAT s panTro5.chr2A 1415671 30 + 111504155 GGCTCCTTCTTGTTTGTATGATCCAGTCAT i panTro5.chr2A C 0 T 133 s panPan2.chr2A 1365114 30 + 114371477 GGCTCCTTCTTGTTTGTATGATCCAGTCAT i panPan2.chr2A I 3262 C 0 s gorGor5.CYUI01015607v1 1389663 30 + 1464242 GGCTCCTTCCTGCTTGTATGATCCAGTCAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110657 30 + 81552678 GACTCCTTCTTGTTGGTATGGTGTGGCCAA i nomLeu3.chr19 I 1 C 0 s macFas5.chr13 1412963 30 - 111193037 GGCTCCTTCCTGTTTTTATGGTGTAGTCAG i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397678 30 - 10304083 GGCTCCTTCGTGCTTGTATGGTGTAGTCCG i cerAty1.NW_012000820v1 C 0 C 0 s saiBol1.JH378218 1231567 30 - 7082604 GGCTCCTTCTTGTTTGTATAGTGTGGTGAG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1394779 27 - 13651311 T e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e chlSab2.chr14 1471590 3661 - 107702431 T e macNem1.NW_012011978v1 1443527 141 + 3644372 T e rheMac8.chr13 1443181 2751 + 108979918 T a score=23907.000000 s hg38.chr2_KI270774v1_alt 126514 14 + 223625 TGTTGCAGGAGGCA s panTro5.chr2A 1415568 14 + 111504155 TGCTGCAGGAGGCA i panTro5.chr2A T 133 C 0 s panPan2.chr2A 1365144 14 + 114371477 TGTTGCAGGAGGCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389693 14 + 1464242 TGCTGCAGGAGGTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110687 14 + 81552678 TGCTGCAGGACGTA i nomLeu3.chr19 C 0 T 134 s macFas5.chr13 1412993 14 - 111193037 TGCCACAGGATGTA i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397708 14 - 10304083 TGAAGCAGGAACTA i cerAty1.NW_012000820v1 C 0 C 0 s saiBol1.JH378218 1231597 14 - 7082604 TGCTGCAGAAGGCA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1394779 27 - 13651311 T e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e chlSab2.chr14 1471590 3661 - 107702431 T e macNem1.NW_012011978v1 1443527 141 + 3644372 T e rheMac8.chr13 1443181 2751 + 108979918 T a score=3266.000000 s hg38.chr2_KI270774v1_alt 126528 3 + 223625 ACA s panTro5.chr2A 1415582 3 + 111504155 CCG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365158 3 + 114371477 CCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389707 3 + 1464242 CCG i gorGor5.CYUI01015607v1 C 0 T 133 s nomLeu3.chr19 1110567 3 + 81552678 CTA i nomLeu3.chr19 T 134 C 0 s macFas5.chr13 1413007 3 - 111193037 CCA i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397722 3 - 10304083 CCA i cerAty1.NW_012000820v1 C 0 C 0 s saiBol1.JH378218 1231611 3 - 7082604 CTG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1394779 27 - 13651311 T e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e chlSab2.chr14 1471590 3661 - 107702431 T e macNem1.NW_012011978v1 1443527 141 + 3644372 T e rheMac8.chr13 1443181 2751 + 108979918 T a score=32867.000000 s hg38.chr2_KI270774v1_alt 126531 15 + 223625 TGTTGGAAGGGAATG s panTro5.chr2A 1415585 15 + 111504155 TGTTGGAAGGGAGTG i panTro5.chr2A C 0 I 132 s panPan2.chr2A 1365161 15 + 114371477 TGTTGGAAGGGAATG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389577 15 + 1464242 TGTTGGAAGGGAATG i gorGor5.CYUI01015607v1 T 133 C 0 s nomLeu3.chr19 1110570 15 + 81552678 TGTTGGAAGGGAATA i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1413010 15 - 111193037 TGTTGTAAGCGAATG i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397725 15 - 10304083 TGTTGGAAGGGAATG i cerAty1.NW_012000820v1 C 0 C 0 s saiBol1.JH378218 1231614 15 - 7082604 TGTTGGAATAGAATG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1394779 27 - 13651311 T e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e chlSab2.chr14 1471590 3661 - 107702431 T e macNem1.NW_012011978v1 1443527 141 + 3644372 T e rheMac8.chr13 1443181 2751 + 108979918 T a score=4019.000000 s hg38.chr2_KI270774v1_alt 126546 2 + 223625 GG s panTro5.chr2A 1415732 2 + 111504155 GG i panTro5.chr2A I 132 C 0 s panPan2.chr2A 1365176 2 + 114371477 GG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389592 2 + 1464242 GA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110585 2 + 81552678 GG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1413025 2 - 111193037 GA i macFas5.chr13 C 0 I 2464 s cerAty1.NW_012000820v1 1397740 2 - 10304083 GG i cerAty1.NW_012000820v1 C 0 C 0 s saiBol1.JH378218 1231629 2 - 7082604 GG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1394779 27 - 13651311 T e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e chlSab2.chr14 1471590 3661 - 107702431 T e macNem1.NW_012011978v1 1443527 141 + 3644372 T e rheMac8.chr13 1443181 2751 + 108979918 T a score=1883.000000 s hg38.chr2_KI270774v1_alt 126548 1 + 223625 G s panTro5.chr2A 1415734 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365178 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389594 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110587 1 + 81552678 G i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1415491 1 - 111193037 G i macFas5.chr13 I 2464 C 0 s cerAty1.NW_012000820v1 1397742 1 - 10304083 G i cerAty1.NW_012000820v1 C 0 C 0 s saiBol1.JH378218 1231631 1 - 7082604 A i saiBol1.JH378218 C 0 T 67 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1394779 27 - 13651311 T e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e chlSab2.chr14 1471590 3661 - 107702431 T e macNem1.NW_012011978v1 1443527 141 + 3644372 T e rheMac8.chr13 1443181 2751 + 108979918 T a score=31001.000000 s hg38.chr2_KI270774v1_alt 126549 12 + 223625 CCGGCGCCTTCT s panTro5.chr2A 1415735 12 + 111504155 CAGGCTCCTTCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365179 12 + 114371477 CCGGCTCCTTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389595 12 + 1464242 CCGGCTCCTTCC i gorGor5.CYUI01015607v1 C 0 T 2340 s nomLeu3.chr19 1110588 12 + 81552678 CAGGGTCCTTCC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1415492 12 - 111193037 CAGGCTCCTTCT i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397743 12 - 10304083 CAGGCTCCTTCG i cerAty1.NW_012000820v1 C 0 C 0 s colAng1.NW_012118821v1 1394752 12 - 13651311 CAGGCTCCTTCT i colAng1.NW_012118821v1 T 27 C 0 s saiBol1.JH378218 1231565 12 - 7082604 CAGGCTCCTTCT i saiBol1.JH378218 T 67 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e chlSab2.chr14 1471590 3661 - 107702431 T e macNem1.NW_012011978v1 1443527 141 + 3644372 T e rheMac8.chr13 1443181 2751 + 108979918 T a score=78561.000000 s hg38.chr2_KI270774v1_alt 126561 33 + 223625 TGTTTGTATGATCCAGTCATTGCTGCAGGAGGC s panTro5.chr2A 1415747 33 + 111504155 TGTTTGTATGATCCAGTCATTGCTGCAGGAGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365191 33 + 114371477 TGTTTGTATGATCCAGTCATTGCTGCAGGAGGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387267 33 + 1464242 TGTTTGTATGATCTAGTCATTGCCACAGGAGGC i gorGor5.CYUI01015607v1 T 2340 I 2340 s nomLeu3.chr19 1110600 33 + 81552678 TGTTTGTATGGTGTAGTCAGTGCCGCAGGAGCC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1415504 33 - 111193037 TGTTTGTATGGTGTAGTCCATGAAGCAGGAACT i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397755 33 - 10304083 TGCTTGTATGATCTAGTCATTGCTGCAGGAGGT i cerAty1.NW_012000820v1 C 0 T 180 s colAng1.NW_012118821v1 1394764 33 - 13651311 TGCTTGTATGATCTAGTCATTGCTGTAGGAGGT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231577 33 - 7082604 TGTTTGTATAGTGTGGTGAGTGCTGCAGAAGGC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e chlSab2.chr14 1471590 3661 - 107702431 T e macNem1.NW_012011978v1 1443527 141 + 3644372 T e rheMac8.chr13 1443181 2751 + 108979918 T a score=26916.000000 s hg38.chr2_KI270774v1_alt 126594 11 + 223625 ACCATGTTGGA s panTro5.chr2A 1415780 11 + 111504155 ACCGTGTTGGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365224 11 + 114371477 ACCATGTTGGA i panPan2.chr2A C 0 T 255 s gorGor5.CYUI01015607v1 1389640 11 + 1464242 ACCATGTTGGA i gorGor5.CYUI01015607v1 I 2340 C 0 s nomLeu3.chr19 1110633 11 + 81552678 ACCATGTTGGA i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1415537 11 - 111193037 ACCATGTTGGA i macFas5.chr13 C 0 C 0 s colAng1.NW_012118821v1 1394797 11 - 13651311 ACCATGTTGGA i colAng1.NW_012118821v1 C 0 T 3397 s saiBol1.JH378218 1231610 11 - 7082604 ACTGTGTTGGA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e chlSab2.chr14 1471590 3661 - 107702431 T e cerAty1.NW_012000820v1 1397788 180 - 10304083 T e macNem1.NW_012011978v1 1443527 141 + 3644372 T e rheMac8.chr13 1443181 2751 + 108979918 T a score=6870.000000 s hg38.chr2_KI270774v1_alt 126605 6 + 223625 AGGGAA s panTro5.chr2A 1415791 6 + 111504155 AGGGAA i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389651 6 + 1464242 AGGGAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110644 6 + 81552678 AGGGAA i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1415548 6 - 111193037 AGGGAA i macFas5.chr13 C 0 I 1 s saiBol1.JH378218 1231621 6 - 7082604 ATAGAA i saiBol1.JH378218 C 0 T 121 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1394808 3397 - 13651311 T e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e chlSab2.chr14 1471590 3661 - 107702431 T e cerAty1.NW_012000820v1 1397788 180 - 10304083 T e macNem1.NW_012011978v1 1443527 141 + 3644372 T e rheMac8.chr13 1443181 2751 + 108979918 T e panPan2.chr2A 1365235 255 + 114371477 T a score=3118.000000 s hg38.chr2_KI270774v1_alt 126611 3 + 223625 AGG s panTro5.chr2A 1415797 3 + 111504155 TGG i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389657 3 + 1464242 TGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110650 3 + 81552678 TGG i nomLeu3.chr19 C 0 T 192 s macFas5.chr13 1415555 3 - 111193037 GGG i macFas5.chr13 I 1 T 2722 s chlSab2.chr14 1467929 3 - 107702431 AGG i chlSab2.chr14 T 3661 C 0 s colAng1.NW_012118821v1 1391411 3 - 13651311 GGG i colAng1.NW_012118821v1 T 3397 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1231627 121 - 7082604 T e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e cerAty1.NW_012000820v1 1397788 180 - 10304083 T e macNem1.NW_012011978v1 1443527 141 + 3644372 T e rheMac8.chr13 1443181 2751 + 108979918 T e panPan2.chr2A 1365235 255 + 114371477 T a score=4365.000000 s hg38.chr2_KI270774v1_alt 126614 3 + 223625 GCA s panTro5.chr2A 1415800 3 + 111504155 GCA i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389660 3 + 1464242 GCA i gorGor5.CYUI01015607v1 C 0 C 0 s cerAty1.NW_012000820v1 1397608 3 - 10304083 GCA i cerAty1.NW_012000820v1 T 180 C 0 s chlSab2.chr14 1467932 3 - 107702431 GCA i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1391414 3 - 13651311 GCA i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1231627 121 - 7082604 T e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e macNem1.NW_012011978v1 1443527 141 + 3644372 T e macFas5.chr13 1415558 2722 - 111193037 T e rheMac8.chr13 1443181 2751 + 108979918 T e nomLeu3.chr19 1110653 192 + 81552678 T e panPan2.chr2A 1365235 255 + 114371477 T a score=8175.000000 s hg38.chr2_KI270774v1_alt 126617 5 + 223625 GGCTC s panTro5.chr2A 1415803 5 + 111504155 GGCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364980 5 + 114371477 GGCTC i panPan2.chr2A T 255 C 0 s gorGor5.CYUI01015607v1 1389663 5 + 1464242 GGCTC i gorGor5.CYUI01015607v1 C 0 C 0 s cerAty1.NW_012000820v1 1397611 5 - 10304083 GGCTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467935 5 - 107702431 GGGTC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1391417 5 - 13651311 AGCTC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1231627 121 - 7082604 T e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e macNem1.NW_012011978v1 1443527 141 + 3644372 T e macFas5.chr13 1415558 2722 - 111193037 T e rheMac8.chr13 1443181 2751 + 108979918 T e nomLeu3.chr19 1110653 192 + 81552678 T a score=2800.000000 s hg38.chr2_KI270774v1_alt 126622 1 + 223625 C s panTro5.chr2A 1415808 1 + 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364985 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389668 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110461 1 + 81552678 C i nomLeu3.chr19 T 192 C 0 s cerAty1.NW_012000820v1 1397616 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467940 1 - 107702431 C i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1391422 1 - 13651311 C i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1231627 121 - 7082604 T e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e macNem1.NW_012011978v1 1443527 141 + 3644372 T e macFas5.chr13 1415558 2722 - 111193037 T e rheMac8.chr13 1443181 2751 + 108979918 T a score=3276.000000 s hg38.chr2_KI270774v1_alt 126623 1 + 223625 T s panTro5.chr2A 1415809 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364986 1 + 114371477 T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389669 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110462 1 + 81552678 T i nomLeu3.chr19 C 0 C 0 s cerAty1.NW_012000820v1 1397617 1 - 10304083 T i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467941 1 - 107702431 T i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1391423 1 - 13651311 T i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231506 1 - 7082604 T i saiBol1.JH378218 T 121 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e manLeu1.NW_012103754v1 957731 2270 - 2200435 T e macNem1.NW_012011978v1 1443527 141 + 3644372 T e macFas5.chr13 1415558 2722 - 111193037 T e rheMac8.chr13 1443181 2751 + 108979918 T a score=118333.000000 s hg38.chr2_KI270774v1_alt 126624 36 + 223625 TCTTGTTTGTATGATCCAGTCATTGCTGCAGGAGGT s panTro5.chr2A 1415810 36 + 111504155 TCTTGTTTGTATGATCCAGTCATTGCTGCAGGAGGT i panTro5.chr2A C 0 I 86 s panPan2.chr2A 1364987 36 + 114371477 TCTTGTTTGTATGGTGTAGGCAATGCCACAGGAACT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389670 36 + 1464242 TCCTGCTTGTATGATCCAGTCATTGCTGCAGGAGGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110463 36 + 81552678 TCTTGTTTGTATGATGTGGTCAGTGCCACAGGAACT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1412836 36 - 111193037 TCTTGTTTGTACGATGTGGTCAATGCCACACCACCT i macFas5.chr13 T 2722 C 0 s cerAty1.NW_012000820v1 1397618 36 - 10304083 TCTTGCTTGTATGGTGTAGTCCGTGAAGCAGGAACT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467942 36 - 107702431 TCTTGTTTGTATGGTGTAGTCAGTCCTGCAGGAGGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955461 36 - 2200435 TCTTGTTTGTACGATGTGGTCAGTGCCACAGGAGCT i manLeu1.NW_012103754v1 T 2270 C 0 s colAng1.NW_012118821v1 1391424 36 - 13651311 TCTTGTTTGTATGATCTACTCATTACCACAGGAGCT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231507 36 - 7082604 TTTTGTTTGTTTGATGTGGTCAGTGCCGCAGGAGCT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e macNem1.NW_012011978v1 1443527 141 + 3644372 T e rheMac8.chr13 1443181 2751 + 108979918 T a score=61382.000000 s hg38.chr2_KI270774v1_alt 126660 18 + 223625 ACCATGTTGGAAGGGAAC s panPan2.chr2A 1365023 18 + 114371477 ACCATGTTGGAAGGGAAC i panPan2.chr2A C 0 I 67 s gorGor5.CYUI01015607v1 1389706 18 + 1464242 ACCGTGTTGGAAGGGAAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110499 18 + 81552678 ACCATTTTGGAAGGGAAT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1412872 18 - 111193037 ACCATGTTGGAAGGGAAT i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397654 18 - 10304083 ACCATGTTGGAAGGGAAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467978 18 - 107702431 ACTACATTGGAAGGGAAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955497 18 - 2200435 ACCATGTTGGAAGGGAAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391460 18 - 13651311 ACCATGTTGTAAGTGAAT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231543 18 - 7082604 ATCATGTTGGAAGAAAAT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e macNem1.NW_012011978v1 1443527 141 + 3644372 T e rheMac8.chr13 1443181 2751 + 108979918 T e panTro5.chr2A 1415846 86 + 111504155 I a score=7821.000000 s hg38.chr2_KI270774v1_alt 126678 2 + 223625 GG s panPan2.chr2A 1365108 2 + 114371477 GG i panPan2.chr2A I 67 C 0 s gorGor5.CYUI01015607v1 1389724 2 + 1464242 GG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110517 2 + 81552678 GG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1412890 2 - 111193037 GG i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397672 2 - 10304083 GG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467996 2 - 107702431 AG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955515 2 - 2200435 GG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391478 2 - 13651311 GG i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231561 2 - 7082604 GG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e macNem1.NW_012011978v1 1443527 141 + 3644372 T e rheMac8.chr13 1443181 2751 + 108979918 T e panTro5.chr2A 1415846 86 + 111504155 I a score=39941.000000 s hg38.chr2_KI270774v1_alt 126680 10 + 223625 GGCAGGCTCG s panTro5.chr2A 1415932 10 + 111504155 AGCCGGCTCC i panTro5.chr2A I 86 C 0 s panPan2.chr2A 1365110 10 + 114371477 GGCAGGCTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389726 10 + 1464242 AGCCGGCTCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110519 10 + 81552678 AGCAGGCTCC i nomLeu3.chr19 C 0 T 67 s macFas5.chr13 1412892 10 - 111193037 GGCGGGTTCC i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397674 10 - 10304083 GGCAGGCTCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467998 10 - 107702431 GGCAGGGTCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955517 10 - 2200435 GGCAGGCTCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391480 10 - 13651311 AGCAGGCTCC i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231563 10 - 7082604 GGCAGGCTCC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e macNem1.NW_012011978v1 1443527 141 + 3644372 T e rheMac8.chr13 1443181 2751 + 108979918 T a score=5005.000000 s hg38.chr2_KI270774v1_alt 126690 1 + 223625 T s panTro5.chr2A 1415942 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365120 1 + 114371477 T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389736 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110462 1 + 81552678 T i nomLeu3.chr19 T 67 C 0 s macFas5.chr13 1412902 1 - 111193037 T i macFas5.chr13 C 0 T 67 s cerAty1.NW_012000820v1 1397684 1 - 10304083 T i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1468008 1 - 107702431 T i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955527 1 - 2200435 T i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391490 1 - 13651311 T i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231573 1 - 7082604 T i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e macNem1.NW_012011978v1 1443527 141 + 3644372 T e rheMac8.chr13 1443181 2751 + 108979918 T a score=125167.000000 s hg38.chr2_KI270774v1_alt 126691 39 + 223625 TCTTGTTTGTATGATCCAGTCACTGCTGCAGGAGGCACC s panTro5.chr2A 1415943 39 + 111504155 TCTTGTTTGTATGGTGTAGGCAGTGCCACAGGAACTACC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365121 39 + 114371477 TCTTGTTTGTATGATCCAGTCATTGTTGCAGGAGGCACC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389737 39 + 1464242 TCTTGTTTGTATGATCCAGTCATTGCTGCAGGAGGTACC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110463 39 + 81552678 TCTTGTTTGTATGATGTGGTCAGTGCCACAGGAACTACC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1412836 39 - 111193037 TCTTGTTTGTACGATGTGGTCAATGCCACACCACCTACC i macFas5.chr13 T 67 C 0 s cerAty1.NW_012000820v1 1397685 39 - 10304083 TCGTGCTTGTATGGTGTAGTCCGTGAAGCAGGAACTACC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1468009 39 - 107702431 TCTTGTTTGTGTGGTGTAGTCAGTCCTGCAGGAGGCACT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955528 39 - 2200435 TCTTGTTTGCATGGTGTAGTCCGTGCCGCAGGATGTACC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391491 39 - 13651311 TCCTGTTGGTATGGTGTAGTCAGTGCCGCAGGAGCTACC i colAng1.NW_012118821v1 C 0 T 201 s saiBol1.JH378218 1231574 39 - 7082604 TCTTGTTTGTATAGTGTGGTGAGTGCTGCAGAAGGCACT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e macNem1.NW_012011978v1 1443527 141 + 3644372 T e rheMac8.chr13 1443181 2751 + 108979918 T a score=30752.000000 s hg38.chr2_KI270774v1_alt 126730 7 + 223625 ATGTTGG s panTro5.chr2A 1415982 7 + 111504155 ATGTTGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365160 7 + 114371477 ATGTTGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389776 7 + 1464242 ATGTTGG i gorGor5.CYUI01015607v1 C 0 T 57 s nomLeu3.chr19 1110502 7 + 81552678 ATTTTGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1412875 7 - 111193037 ATGTTGG i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397724 7 - 10304083 ATGTTGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1468048 7 - 107702431 ACGTTGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955567 7 - 2200435 ATATTGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391329 7 - 13651311 ATGTTGG i colAng1.NW_012118821v1 T 201 C 0 s saiBol1.JH378218 1231613 7 - 7082604 GTGTTGG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e macNem1.NW_012011978v1 1443527 141 + 3644372 T e rheMac8.chr13 1443181 2751 + 108979918 T a score=35789.000000 s hg38.chr2_KI270774v1_alt 126737 10 + 223625 AAGGGAATGG s panTro5.chr2A 1415989 10 + 111504155 AAGGGAACTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365167 10 + 114371477 AAGGGAATGG i panPan2.chr2A C 0 T 3730 s nomLeu3.chr19 1110509 10 + 81552678 AAGGGAATGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1412882 10 - 111193037 AAGGGAATGG i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397731 10 - 10304083 AAGGGAATGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1468055 10 - 107702431 AAGGGAATAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955574 10 - 2200435 AAGGGAATGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391336 10 - 13651311 AAGGGAATGG i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231620 10 - 7082604 AATAGAATGG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e macNem1.NW_012011978v1 1443527 141 + 3644372 T e rheMac8.chr13 1443181 2751 + 108979918 T e gorGor5.CYUI01015607v1 1389783 57 + 1464242 T a score=168470.000000 s hg38.chr2_KI270774v1_alt 126747 47 + 223625 AGCTGGCTCCTTCTTGTTTGTATGATCCAGTCATTGCTGCGGGAGGC s panTro5.chr2A 1415999 47 + 111504155 GGCAGGCTCCTTCTTATTTGTAAGATCTAGTCATTGCTGCAGGAGGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361447 47 + 114371477 AGCAGGCTCCTTCCTGTTTGTATGATCTAGTCATTGCCGCGGGAGGT i panPan2.chr2A T 3730 C 0 s gorGor5.CYUI01015607v1 1389726 47 + 1464242 AGCCGGCTCCTTCTTGTTTGTATGATCCAGTCATTGCTGCAGGAGGT i gorGor5.CYUI01015607v1 T 57 C 0 s nomLeu3.chr19 1110519 47 + 81552678 AGCAGGCTCCTTCTTGTTTATATGGTGTAGTCATTGCCACAGGAGGC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1412892 47 - 111193037 GGCGGGTTCCTTCTTGTTTGTATGATCTACTCACTGCCGCAGGAACT i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397741 47 - 10304083 GGCAGGCTCCTTCGTGCTTGTATGATCTAGTCATTGCTGCAGGAGGT i cerAty1.NW_012000820v1 C 0 T 134 s chlSab2.chr14 1468065 47 - 107702431 GGCAGGGTCCTTCTTGTTTGTGTGGTGTAGTCAGTCCTGCAGGAGGC i chlSab2.chr14 C 0 T 335 s manLeu1.NW_012103754v1 955584 47 - 2200435 GGCAGGCTGCTTCTTGTTTTTGTGGTGTAGTCAGTGCCGCAGGAGGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391346 47 - 13651311 GGCAGGCTCTTTCTTGTTTGCATGGTGTAGTCTGTGCCGCAGGATGT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231630 47 - 7082604 GACAGGCTCCTTCTTGTTTGCATAATGTGGTCAGTGCTGCAGGAGCT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e macNem1.NW_012011978v1 1443527 141 + 3644372 T e rheMac8.chr13 1443181 2751 + 108979918 T a score=18318.000000 s hg38.chr2_KI270774v1_alt 126794 4 + 223625 ACCA s panTro5.chr2A 1416046 4 + 111504155 ACCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361494 4 + 114371477 ACTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389773 4 + 1464242 ACCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110566 4 + 81552678 ACTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440430 4 + 108979918 ACCA i rheMac8.chr13 T 2751 C 0 s macFas5.chr13 1412939 4 - 111193037 ACCA i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397654 4 - 10304083 ACCA i cerAty1.NW_012000820v1 T 134 C 0 s chlSab2.chr14 1467777 4 - 107702431 ACCA i chlSab2.chr14 T 335 C 0 s manLeu1.NW_012103754v1 955631 4 - 2200435 ACTA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391393 4 - 13651311 ACCA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231677 4 - 7082604 ACAG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e macNem1.NW_012011978v1 1443527 141 + 3644372 T a score=32331.000000 s hg38.chr2_KI270774v1_alt 126798 6 + 223625 TGTTGG s panTro5.chr2A 1416050 6 + 111504155 TGTTTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361498 6 + 114371477 TGTTGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389777 6 + 1464242 TGTTGG i gorGor5.CYUI01015607v1 C 0 T 206 s nomLeu3.chr19 1110570 6 + 81552678 TGTTGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440434 6 + 108979918 TGTTGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412943 6 - 111193037 TGTTGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443386 6 + 3644372 TGTTGT i macNem1.NW_012011978v1 T 141 C 0 s cerAty1.NW_012000820v1 1397658 6 - 10304083 TGTTGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467781 6 - 107702431 TATTGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955635 6 - 2200435 TGTTGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391397 6 - 13651311 TGTTGC i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231681 6 - 7082604 TGTTGG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=109752.000000 s hg38.chr2_KI270774v1_alt 126804 22 + 223625 AAGAGAATGGGGCAGGCTCCTT s panTro5.chr2A 1416056 22 + 111504155 AAGGGAATGGGGCAGGCTCCTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361504 22 + 114371477 AAGTGAATGGAGCAGGCTCCTT i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1110576 22 + 81552678 AAGGGAATAGGGCAGGGTCCTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440440 22 + 108979918 AAGGGAATGGGGCGGGTTCCTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412949 22 - 111193037 AAGCGAATGGAGCAGGCTCCTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443392 22 + 3644372 AAGCGAATGGAGCAGGCTCCTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397664 22 - 10304083 AAGGGAATGGGGCAGGCTCCTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467787 22 - 107702431 AAGGGAATGGGGCAGGCAGCTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955641 22 - 2200435 AAGGGAATGGAGCAGGTGCCTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391403 22 - 13651311 AAGAGAATGGGGCAAGCTCCTT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231687 22 - 7082604 AAGAAAATGGGGCAGGCTCCTT i saiBol1.JH378218 C 0 T 134 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e gorGor5.CYUI01015607v1 1389783 206 + 1464242 T a score=97409.000000 s hg38.chr2_KI270774v1_alt 126826 27 + 223625 CTTGTTTATATGATCCAGTTATTGCTG s panTro5.chr2A 1416078 27 + 111504155 CTTGTTTGTATGATCCAGTCATTGTTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361526 27 + 114371477 CCTGTTTTTATGGTGTAGTCATTGCCG i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1110598 27 + 81552678 CCTGTTTGTATGGTGTAGTCAGTGCCG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440462 27 + 108979918 CTTGTTTGTATGATCTACTCACTGCCG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412971 27 - 111193037 CCTGTTTTTATGGTGTAGTCAGTGCCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443414 27 + 3644372 CTTGTTTGTATGGTGTAGTCCATGAAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397686 27 - 10304083 CGTGCTTGTATGGTGTAGTCCGTGAAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467809 27 - 107702431 CTTGTTTTTGTGGTGTAGTCAGTGCCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955663 27 - 2200435 CCTGTTTTTATGGTGTAGTCAGTGCCA i manLeu1.NW_012103754v1 C 0 T 201 s colAng1.NW_012118821v1 1391425 27 - 13651311 CTTGTTTGTATGATCTACTCATTACCA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231575 27 - 7082604 CTTGTTTGTATAGTGTGGTGAGTGCTG i saiBol1.JH378218 T 134 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e gorGor5.CYUI01015607v1 1389783 206 + 1464242 T a score=46734.000000 s hg38.chr2_KI270774v1_alt 126853 11 + 223625 CAGGAGGCACC s panTro5.chr2A 1416105 11 + 111504155 CAGGAGGCACC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361553 11 + 114371477 CAGGAGGTACT i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1110625 11 + 81552678 CAGGAGCCACC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440489 11 + 108979918 CAGGATGTACC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412998 11 - 111193037 CAGGATGTACC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443441 11 + 3644372 CAGGAACTACC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397713 11 - 10304083 CAGGAACTACC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467836 11 - 107702431 CAGGAGGCACT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955489 11 - 2200435 CAGGAGCTACC i manLeu1.NW_012103754v1 T 201 C 0 s colAng1.NW_012118821v1 1391452 11 - 13651311 CAGGAGCTACC i colAng1.NW_012118821v1 C 0 T 134 s saiBol1.JH378218 1231602 11 - 7082604 CAGAAGGCACT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e gorGor5.CYUI01015607v1 1389783 206 + 1464242 T a score=4664.000000 s hg38.chr2_KI270774v1_alt 126864 1 + 223625 A s panTro5.chr2A 1416116 1 + 111504155 A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361564 1 + 114371477 A i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1110636 1 + 81552678 A i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440500 1 + 108979918 A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413009 1 - 111193037 A i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443452 1 + 3644372 A i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397724 1 - 10304083 A i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467847 1 - 107702431 A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955500 1 - 2200435 A i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391329 1 - 13651311 A i colAng1.NW_012118821v1 T 134 C 0 s saiBol1.JH378218 1231613 1 - 7082604 G i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e gorGor5.CYUI01015607v1 1389783 206 + 1464242 T a score=156918.000000 s hg38.chr2_KI270774v1_alt 126865 27 + 223625 TGTTGGAAGGGAATGGGGCAGGCGCCT s panTro5.chr2A 1416117 27 + 111504155 TGTTGGAAGGGAATGGGGCCGGCTCCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361565 27 + 114371477 CGTTGGAAGCGAGTAGGGCAGGGTCCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389577 27 + 1464242 TGTTGGAAGGGAATGGAGCCGGCTCCT i gorGor5.CYUI01015607v1 T 206 C 0 s nomLeu3.chr19 1110637 27 + 81552678 TGTTGGAAGGGAATGGGCCAGACTCCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440501 27 + 108979918 TGTTGTAAGCGAATGGAGCAGGCTCCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413010 27 - 111193037 TGTTGTAAGCGAATGGAGCAGGCTCCT i macFas5.chr13 C 0 T 201 s macNem1.NW_012011978v1 1443453 27 + 3644372 TGTTGGAAGGGAATGGGGCAGGCTCCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397725 27 - 10304083 TGTTGGAAGGGAATGGGGCAGGCTCCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467848 27 - 107702431 TGTTGGAAGGAAATGGAGCAGGTTTCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955501 27 - 2200435 TGTTGGAAGGGAATGGGGCAGGCTCCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391330 27 - 13651311 TGTTGGAAGGGAATGGGGCAGGCTCTT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231614 27 - 7082604 TGTTGGAATAGAATGGGACAGGCTCCT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=132695.000000 s hg38.chr2_KI270774v1_alt 126892 28 + 223625 TCTTGTTTGTATGATCCAGTCATTGCTG s panTro5.chr2A 1416144 28 + 111504155 TCCTGTTTGTATGATCCAGTCATTGCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361592 28 + 114371477 TCTTGTTTCCATGGTGTAGTCAGTGCCG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389604 28 + 1464242 TCCTGTTTGTATGATCCAGTCATTGCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110664 28 + 81552678 TCTTGTTGGTATGGTGTGGCCAATGCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440528 28 + 108979918 TCCTGTTTTTATGGTGTAGTCAGTGCCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412836 28 - 111193037 TCTTGTTTGTACGATGTGGTCAATGCCA i macFas5.chr13 T 201 C 0 s macNem1.NW_012011978v1 1443480 28 + 3644372 TCGTGCTTGTATGATCTAGTCATTGCTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397752 28 - 10304083 TCGTGCTTGTATGATCTAGTCATTGCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467875 28 - 107702431 TCCTGTTTGTATGGTGTAGTCAGTCCCG i chlSab2.chr14 C 0 T 134 s manLeu1.NW_012103754v1 955528 28 - 2200435 TCTTGTTTGCATGGTGTAGTCCGTGCCG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391357 28 - 13651311 TCTTGTTTGCATGGTGTAGTCTGTGCCG i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231641 28 - 7082604 TCTTGTTTGCATAATGTGGTCAGTGCTG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=31497.000000 s hg38.chr2_KI270774v1_alt 126920 7 + 223625 CAGGAGG s panTro5.chr2A 1416172 7 + 111504155 CAGGAGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361620 7 + 114371477 CAGGAGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389632 7 + 1464242 CAGGAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110692 7 + 81552678 CAGGACG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440556 7 + 108979918 CAGGATG i rheMac8.chr13 C 0 T 134 s macFas5.chr13 1412864 7 - 111193037 CACCACC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443508 7 + 3644372 CAGGAGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397780 7 - 10304083 CAGGAGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467769 7 - 107702431 CAGGAGC i chlSab2.chr14 T 134 C 0 s manLeu1.NW_012103754v1 955556 7 - 2200435 CAGGATG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391385 7 - 13651311 CAGGATG i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231669 7 - 7082604 CAGGAGC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=18960.000000 s hg38.chr2_KI270774v1_alt 126927 3 + 223625 TAC s panTro5.chr2A 1416179 3 + 111504155 TAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361627 3 + 114371477 CAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389639 3 + 1464242 TAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110699 3 + 81552678 TAC i nomLeu3.chr19 C 0 T 240 s rheMac8.chr13 1440429 3 + 108979918 TAC i rheMac8.chr13 T 134 C 0 s macFas5.chr13 1412871 3 - 111193037 TAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443515 3 + 3644372 TAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397787 3 - 10304083 TAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467776 3 - 107702431 TAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955563 3 - 2200435 TAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391392 3 - 13651311 TAC i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231676 3 - 7082604 TAC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=44969.000000 s hg38.chr2_KI270774v1_alt 126930 9 + 223625 CATGTTGGA s panTro5.chr2A 1416182 9 + 111504155 CATGTTGGA i panTro5.chr2A C 0 T 268 s panPan2.chr2A 1361630 9 + 114371477 TACGTTGGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389642 9 + 1464242 CATGTTGGA i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1440432 9 + 108979918 CATGTTGGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412874 9 - 111193037 CATGTTGGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443518 9 + 3644372 CATGTTGGA i macNem1.NW_012011978v1 C 0 T 131 s cerAty1.NW_012000820v1 1397790 9 - 10304083 CATGTTGGA i cerAty1.NW_012000820v1 C 0 T 145 s chlSab2.chr14 1467779 9 - 107702431 CATATTGGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955566 9 - 2200435 CATATTGGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391395 9 - 13651311 CATGTTGCA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231679 9 - 7082604 AGTGTTGGA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e nomLeu3.chr19 1110702 240 + 81552678 T a score=40685.000000 s hg38.chr2_KI270774v1_alt 126939 13 + 223625 AGGGAACGGGGCA s panTro5.chr2A 1415923 13 + 111504155 AGGGAATGGAGCC i panTro5.chr2A T 268 C 0 s panPan2.chr2A 1361639 13 + 114371477 AGGGAACAGGGCA i panPan2.chr2A C 0 I 3328 s gorGor5.CYUI01015607v1 1389651 12 + 1464242 AGGGAAT-GGGCA i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1440441 13 + 108979918 AGGGAATGGGGCG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412883 13 - 111193037 AGGGAATGGGGCG i macFas5.chr13 C 0 C 0 s chlSab2.chr14 1467788 13 - 107702431 AGGGAATGGGGCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955575 13 - 2200435 AGGGAATGGGGCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391404 13 - 13651311 AGAGAATGGGGCA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231688 13 - 7082604 AGAAAATGGGGCA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e cerAty1.NW_012000820v1 1397799 145 - 10304083 T e macNem1.NW_012011978v1 1443527 131 + 3644372 T e nomLeu3.chr19 1110702 240 + 81552678 T a score=11723.000000 s hg38.chr2_KI270774v1_alt 126952 6 + 223625 GGCTCG s panTro5.chr2A 1415936 6 + 111504155 GGCTCC i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389663 6 + 1464242 GGCTCC i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1440454 6 + 108979918 GGTTCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412896 6 - 111193037 GGTTCC i macFas5.chr13 C 0 C 0 s chlSab2.chr14 1467801 6 - 107702431 GGCAGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955588 6 - 2200435 GGCTGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391417 6 - 13651311 AGCTCC i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231701 6 - 7082604 GGCTCC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e cerAty1.NW_012000820v1 1397799 145 - 10304083 T e macNem1.NW_012011978v1 1443527 131 + 3644372 T e nomLeu3.chr19 1110702 240 + 81552678 T e panPan2.chr2A 1361652 3328 + 114371477 I a score=8190.000000 s hg38.chr2_KI270774v1_alt 126958 2 + 223625 TT s panTro5.chr2A 1415942 2 + 111504155 TT i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389669 2 + 1464242 TT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110462 2 + 81552678 TT i nomLeu3.chr19 T 240 C 0 s rheMac8.chr13 1440460 2 + 108979918 TT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412902 2 - 111193037 TT i macFas5.chr13 C 0 C 0 s chlSab2.chr14 1467807 2 - 107702431 TT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955594 2 - 2200435 TT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391423 2 - 13651311 TT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231707 2 - 7082604 TT i saiBol1.JH378218 C 0 T 201 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e cerAty1.NW_012000820v1 1397799 145 - 10304083 T e macNem1.NW_012011978v1 1443527 131 + 3644372 T e panPan2.chr2A 1361652 3328 + 114371477 I a score=57236.000000 s hg38.chr2_KI270774v1_alt 126960 22 + 223625 CTTGTTTGTATGATCCAATCAC s panTro5.chr2A 1415944 22 + 111504155 CTTGTTTGTATGGTGTAGGCAG i panTro5.chr2A C 0 T 67 s gorGor5.CYUI01015607v1 1389671 22 + 1464242 CCTGCTTGTATGATCCAGTCAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110464 22 + 81552678 CTTGTTTGTATGATGTGGTCAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440462 22 + 108979918 CTTGTTTGTATGATCTACTCAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412904 22 - 111193037 CTTGTTTGTATGATCTACTCAC i macFas5.chr13 C 0 C 0 s chlSab2.chr14 1467809 22 - 107702431 CTTGTTTTTGTGGTGTAGTCAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955596 22 - 2200435 CTTGTTTTTGTGGTGTAGTCAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391425 22 - 13651311 CTTGTTTGTATGATCTACTCAT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231508 22 - 7082604 TTTGTTTGTTTGATGTGGTCAG i saiBol1.JH378218 T 201 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e cerAty1.NW_012000820v1 1397799 145 - 10304083 T e macNem1.NW_012011978v1 1443527 131 + 3644372 T e panPan2.chr2A 1361652 3328 + 114371477 I a score=38423.000000 s hg38.chr2_KI270774v1_alt 126982 13 + 223625 TGCTGCAGGAGGC s panTro5.chr2A 1415899 13 + 111504155 TGCTGCAGGAGGT i panTro5.chr2A T 67 C 0 s gorGor5.CYUI01015607v1 1389693 13 + 1464242 TGCTGCAGGAGGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110486 13 + 81552678 TGCCACAGGAACT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440484 13 + 108979918 TGCCGCAGGATGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412926 13 - 111193037 TGCCGCAGGAACT i macFas5.chr13 C 0 C 0 s chlSab2.chr14 1467831 13 - 107702431 TGCCACAGGAGGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955618 13 - 2200435 TGCCGCAGGAGGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391447 13 - 13651311 TACCACAGGAGCT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231530 13 - 7082604 TGCCGCAGGAGCT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e cerAty1.NW_012000820v1 1397799 145 - 10304083 T e macNem1.NW_012011978v1 1443527 131 + 3644372 T e panPan2.chr2A 1361652 3328 + 114371477 I a score=97601.000000 s hg38.chr2_KI270774v1_alt 126995 24 + 223625 ACCATGTTGGAAGGGAATGGAGCT s panTro5.chr2A 1415912 24 + 111504155 ACCATGTTGGAAGGGAATGGAGCC i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389706 24 + 1464242 ACCGTGTTGGAAGGGAATGGAGCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110499 24 + 81552678 ACCATTTTGGAAGGGAATGGAGCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440497 24 + 108979918 ACCATGTTGTAAGCGAATGGAGCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412939 24 - 111193037 ACCATGTTGTAAGCGAATGGAGCA i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397654 24 - 10304083 ACCATGTTGGAAGGGAATGGGGCA i cerAty1.NW_012000820v1 T 145 C 0 s chlSab2.chr14 1467844 24 - 107702431 ACTATGTTGGAAGGAAATGGAGCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955631 24 - 2200435 ACTATGTTGGAAGGGAATGGAGCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391460 24 - 13651311 ACCATGTTGTAAGTGAATGGAGCA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231543 24 - 7082604 ATCATGTTGGAAGAAAATGGGGCA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e macNem1.NW_012011978v1 1443527 131 + 3644372 T e panPan2.chr2A 1361652 3328 + 114371477 I a score=26081.000000 s hg38.chr2_KI270774v1_alt 127019 5 + 223625 GGCTC s panTro5.chr2A 1415936 5 + 111504155 GGCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364980 5 + 114371477 GGCTC i panPan2.chr2A I 3328 C 0 s gorGor5.CYUI01015607v1 1389730 5 + 1464242 GGCTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110523 5 + 81552678 GGCTC i nomLeu3.chr19 C 0 T 67 s rheMac8.chr13 1440521 5 + 108979918 GGCTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412963 5 - 111193037 GGCTC i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397678 5 - 10304083 GGCTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467868 5 - 107702431 GGTTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955655 5 - 2200435 GGTGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391484 5 - 13651311 GGCTC i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231567 5 - 7082604 GGCTC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e macNem1.NW_012011978v1 1443527 131 + 3644372 T a score=158259.000000 s hg38.chr2_KI270774v1_alt 127024 38 + 223625 CTTCTTGTTTGTATGATCCAGTCATTGCTGCGGGAGGC s panTro5.chr2A 1415941 38 + 111504155 CTTCTTGTTTGTATGGTGTAGGCAGTGCCACAGGAACT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364985 38 + 114371477 CTTCTTGTTTGTATGGTGTAGGCAATGCCACAGGAACT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389735 38 + 1464242 CTTCTTGTTTGTATGATCCAGTCATTGCTGCAGGAGGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110461 38 + 81552678 CTTCTTGTTTGTATGATGTGGTCAGTGCCACAGGAACT i nomLeu3.chr19 T 67 C 0 s rheMac8.chr13 1440526 38 + 108979918 CTTCCTGTTTTTATGGTGTAGTCAGTGCCACAGGATGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412968 38 - 111193037 CTTCCTGTTTTTATGGTGTAGTCAGTGCCACAGGATGT i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397683 38 - 10304083 CTTCGTGCTTGTATGGTGTAGTCCGTGAAGCAGGAACT i cerAty1.NW_012000820v1 C 0 T 2245 s chlSab2.chr14 1467873 38 - 107702431 CTTCCTGTTTGTATGGTGTAGTCAGTCCCGCAGGAGGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955660 38 - 2200435 CTTCCTGTTTTTATGGTGTAGTCAGTGCCACAGGAGGC i manLeu1.NW_012103754v1 C 0 T 201 s colAng1.NW_012118821v1 1391489 38 - 13651311 CTTCCTGTTGGTATGGTGTAGTCAGTGCCGCAGGAGCT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231572 38 - 7082604 CTTCTTGTTTGTATAGTGTGGTGAGTGCTGCAGAAGGC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e macNem1.NW_012011978v1 1443527 131 + 3644372 T a score=34578.000000 s hg38.chr2_KI270774v1_alt 127062 8 + 223625 ACCATGTT s panTro5.chr2A 1415979 8 + 111504155 ACCATGTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365023 8 + 114371477 ACCATGTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389773 8 + 1464242 ACCATGTT i gorGor5.CYUI01015607v1 C 0 T 2329 s nomLeu3.chr19 1110499 8 + 81552678 ACCATTTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440564 8 + 108979918 ACCATGTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413006 8 - 111193037 ACCATGTT i macFas5.chr13 C 0 C 0 s chlSab2.chr14 1467911 8 - 107702431 ACTACGTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955497 8 - 2200435 ACCATGTT i manLeu1.NW_012103754v1 T 201 C 0 s colAng1.NW_012118821v1 1391527 8 - 13651311 ACCATGTT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231610 8 - 7082604 ACTGTGTT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e cerAty1.NW_012000820v1 1397721 2245 - 10304083 T e macNem1.NW_012011978v1 1443527 131 + 3644372 T a score=3321.000000 s hg38.chr2_KI270774v1_alt 127070 1 + 223625 A s panTro5.chr2A 1415987 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365031 1 + 114371477 G i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1110507 1 + 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440572 1 + 108979918 G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413014 1 - 111193037 G i macFas5.chr13 C 0 C 0 s chlSab2.chr14 1467919 1 - 107702431 G i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955505 1 - 2200435 G i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391535 1 - 13651311 G i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231618 1 - 7082604 G i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e cerAty1.NW_012000820v1 1397721 2245 - 10304083 T e macNem1.NW_012011978v1 1443527 131 + 3644372 T e gorGor5.CYUI01015607v1 1389781 2329 + 1464242 T a score=14660.000000 s hg38.chr2_KI270774v1_alt 127071 5 + 223625 GAAGG s panTro5.chr2A 1415988 5 + 111504155 GAAGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365032 5 + 114371477 GAAGG i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1110508 5 + 81552678 GAAGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440573 5 + 108979918 TAAGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413015 5 - 111193037 TAAGC i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1395476 5 - 10304083 GAAGG i cerAty1.NW_012000820v1 T 2245 C 0 s chlSab2.chr14 1467920 5 - 107702431 GAAGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955506 5 - 2200435 GAAGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391536 5 - 13651311 GAAGA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231619 5 - 7082604 GAATA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e macNem1.NW_012011978v1 1443527 131 + 3644372 T e gorGor5.CYUI01015607v1 1389781 2329 + 1464242 T a score=22465.000000 s hg38.chr2_KI270774v1_alt 127076 5 + 223625 GAATG s panTro5.chr2A 1415993 5 + 111504155 GAACT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365037 5 + 114371477 GAACT i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1110513 5 + 81552678 GAATG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440578 5 + 108979918 GAATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413020 5 - 111193037 GAATG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443396 5 + 3644372 GAATG i macNem1.NW_012011978v1 T 131 C 0 s cerAty1.NW_012000820v1 1395481 5 - 10304083 GAATG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467925 5 - 107702431 GAATA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955511 5 - 2200435 GAATG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391541 5 - 13651311 GAACG i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231624 5 - 7082604 GAATG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e gorGor5.CYUI01015607v1 1389781 2329 + 1464242 T a score=71224.000000 s hg38.chr2_KI270774v1_alt 127081 11 + 223625 GGGCAGGCTCC s panTro5.chr2A 1415998 11 + 111504155 GGGCAGGCTCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365042 11 + 114371477 GGGCAGGCTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387452 11 + 1464242 GGGCAGGCTCC i gorGor5.CYUI01015607v1 T 2329 C 0 s nomLeu3.chr19 1110518 11 + 81552678 GAGCAGGCTCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440583 11 + 108979918 GAGCAGGCTCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413025 11 - 111193037 GAGCAGGCTCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443401 11 + 3644372 GAGCAGGCTCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395486 11 - 10304083 GGGCAGGCTGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467930 11 - 107702431 GGGCAGGGTCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955516 11 - 2200435 GGGCAGGCTCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391546 11 - 13651311 GGGCAGGTTCC i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231629 11 - 7082604 GGACAGGCTCC i saiBol1.JH378218 C 0 T 134 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=7098.000000 s hg38.chr2_KI270774v1_alt 127092 1 + 223625 T s panTro5.chr2A 1416009 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365053 1 + 114371477 T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387463 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110529 1 + 81552678 T i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440594 1 + 108979918 T i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413036 1 - 111193037 T i macFas5.chr13 C 0 T 201 s macNem1.NW_012011978v1 1443412 1 + 3644372 T i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395497 1 - 10304083 T i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467941 1 - 107702431 T i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955527 1 - 2200435 T i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391557 1 - 13651311 T i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231506 1 - 7082604 T i saiBol1.JH378218 T 134 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=163854.000000 s hg38.chr2_KI270774v1_alt 127093 36 + 223625 TCTTGTTTGTATGATCCAGTCACTGCTGCGGGAGGC s panTro5.chr2A 1416010 36 + 111504155 TCTTATTTGTAAGATCTAGTCATTGCTGCAGGAGGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365054 36 + 114371477 TCTTATTTGTAAGATCTAGTCATTGCTGCAGGAGGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387464 36 + 1464242 TCCTGTTTGTATGATCTAGTCATTGCTGCAGGAGCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110530 36 + 81552678 TCTTGTTTATATGGTGTAGTCATTGCCACAGGAGGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440595 36 + 108979918 TCCTGTTTTTATGGTGTAGTCACTGCCGCAGGAACT i rheMac8.chr13 C 0 T 201 s macFas5.chr13 1412836 36 - 111193037 TCTTGTTTGTACGATGTGGTCAATGCCACACCACCT i macFas5.chr13 T 201 C 0 s macNem1.NW_012011978v1 1443413 36 + 3644372 TCTTGTTTGTATGGTGTAGTCCATGAAGCAGGAACT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395498 36 - 10304083 TCTTGTTTTTGTGGTGTAGTCAGTGCCGCAGGAGGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467942 36 - 107702431 TCTTGTTTGTATGGTGTAGTCAGTCCTGCAGGAGGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955528 36 - 2200435 TCTTGTTTGCATGGTGTAGTCCGTGCCGCAGGATGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391558 36 - 13651311 TCTTGTTGGTATGGTGTAGTCAGTGCCGCAGGAGGC i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231507 36 - 7082604 TTTTGTTTGTTTGATGTGGTCAGTGCCGCAGGAGCT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=23454.000000 s hg38.chr2_KI270774v1_alt 127129 4 + 223625 ACCA s panTro5.chr2A 1416046 4 + 111504155 ACCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365090 4 + 114371477 ACCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387500 4 + 1464242 ACCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110566 4 + 81552678 ACTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440430 4 + 108979918 ACCA i rheMac8.chr13 T 201 C 0 s macFas5.chr13 1412872 4 - 111193037 ACCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443449 4 + 3644372 ACCA i macNem1.NW_012011978v1 C 0 T 67 s cerAty1.NW_012000820v1 1395534 4 - 10304083 ACTA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467978 4 - 107702431 ACTA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955564 4 - 2200435 ACCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391594 4 - 13651311 ACTA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231543 4 - 7082604 ATCA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=36792.000000 s hg38.chr2_KI270774v1_alt 127133 7 + 223625 TGTTGGA s panTro5.chr2A 1416050 7 + 111504155 TGTTTGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365094 7 + 114371477 TGTTTGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387504 7 + 1464242 TGTTGTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110570 7 + 81552678 TGTTGGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440434 7 + 108979918 TGTTGGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412876 7 - 111193037 TGTTGGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443386 7 + 3644372 TGTTGTA i macNem1.NW_012011978v1 T 67 C 0 s cerAty1.NW_012000820v1 1395538 7 - 10304083 TGTTGGA i cerAty1.NW_012000820v1 C 0 I 2120 s chlSab2.chr14 1467982 7 - 107702431 CATTGGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955568 7 - 2200435 TATTGGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391598 7 - 13651311 CGTTGGA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231547 7 - 7082604 TGTTGGA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=296091.000000 s hg38.chr2_KI270774v1_alt 127140 59 + 223625 AGGGAATGGGGCAGGCTCCTTCTTGTTTATATGATCCAGTTATTGCTGCAGGAGGCACC s panTro5.chr2A 1416057 59 + 111504155 AGGGAATGGGGCAGGCTCCTTCTTGTTTGTATGATCCAGTCATTGTTGCAGGAGGCACC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365101 59 + 114371477 AGGGAATGGGGCAGGCTCCTTCTTGTTTGTATGATCCAGTCATTGTTGCAGGAGGCACC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387511 59 + 1464242 AGTGAATGGAGCAGGCTCCTTCCTGTTTGCATGGTGTAGTGAGTGCCACAGGAGGCAGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110577 59 + 81552678 AGGGAATAGGGCAGGGTCCTTCCTGTTTGTATGGTGTAGTCAGTGCCGCAGGAGCCACC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440441 59 + 108979918 AGGGAATGGGGCGGGTTCCTTCTTGTTTGTATGATCTACTCACTGCCGCAGGATGTACC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412883 59 - 111193037 AGGGAATGGGGCGGGTTCCTTCTTGTTTGTATGATCTACTCACTGCCGCAGGAACTACC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443393 59 + 3644372 AGCGAATGGAGCAGGCTCCTTCTTGTTTGTATGGTGTAGTCCATGAAGCAGGAACTACC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397665 59 - 10304083 AGGGAATGGGGCAGGCTCCTTCGTGCTTGTATGGTGTAGTCCGTGAAGCAGGAACTACC i cerAty1.NW_012000820v1 I 2120 C 0 s chlSab2.chr14 1467989 59 - 107702431 AGGGAATAGGGCAGGGTCCTTCTTGTTTGTGTGGTGTAGTCAGTCCTGCAGGAGGCACT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955575 59 - 2200435 AGGGAATGGGGCAGGCTGCTTCTTGTTTTTGTGGTGTAGTCAGTGCCGCAGGAGGCACT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391605 59 - 13651311 AGGGAATAGGGCAGGGTCCTTCTTGTTGGTATGGTGTGGCCAGTGCTGCAGGACGTACC i colAng1.NW_012118821v1 C 0 T 335 s saiBol1.JH378218 1231554 59 - 7082604 AGAAAATGGGGCAGGCTCCTTCTTGTTTGTATAGTGTGGTGAGTGCTGCAGAAGGCACT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=5634.000000 s hg38.chr2_KI270774v1_alt 127199 1 + 223625 A s panTro5.chr2A 1416116 1 + 111504155 A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365160 1 + 114371477 A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387570 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 I 2006 s nomLeu3.chr19 1110636 1 + 81552678 A i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440500 1 + 108979918 A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412942 1 - 111193037 A i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443452 1 + 3644372 A i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397724 1 - 10304083 A i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1468048 1 - 107702431 A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955634 1 - 2200435 A i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391329 1 - 13651311 A i colAng1.NW_012118821v1 T 335 C 0 s saiBol1.JH378218 1231613 1 - 7082604 G i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=138395.000000 s hg38.chr2_KI270774v1_alt 127200 24 + 223625 TGTTGGAAGGGAATGGGGCAGGCG s panTro5.chr2A 1416117 24 + 111504155 TGTTGGAAGGGAATGGGGCCGGCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365161 24 + 114371477 TGTTGGAAGGGAATGGGGCCGGCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389577 24 + 1464242 TGTTGGAAGGGAATGGAGCCGGCT i gorGor5.CYUI01015607v1 I 2006 C 0 s nomLeu3.chr19 1110637 24 + 81552678 TGTTGGAAGGGAATGGGCCAGACT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440501 24 + 108979918 TGTTGTAAGCGAATGGAGCAGGCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412943 24 - 111193037 TGTTGTAAGCGAATGGAGCAGGCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443453 24 + 3644372 TGTTGGAAGGGAATGGGGCAGGCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397725 24 - 10304083 TGTTGGAAGGGAATGGGGCAGGCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1468049 24 - 107702431 CGTTGGAAGGGAATAGGGCAGGGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955635 24 - 2200435 TGTTGGAAGGGAATGGAGCAGGTG i manLeu1.NW_012103754v1 C 0 T 134 s colAng1.NW_012118821v1 1391330 24 - 13651311 TGTTGGAAGGGAATGGGGCAGGCT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231614 24 - 7082604 TGTTGGAATAGAATGGGACAGGCT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=21126.000000 s hg38.chr2_KI270774v1_alt 127224 3 + 223625 CCT s panTro5.chr2A 1416141 3 + 111504155 CCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365185 3 + 114371477 CCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389601 3 + 1464242 CCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110661 3 + 81552678 CCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440525 3 + 108979918 CCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412967 3 - 111193037 CCT i macFas5.chr13 C 0 T 134 s macNem1.NW_012011978v1 1443477 3 + 3644372 CCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397749 3 - 10304083 CCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1468073 3 - 107702431 CCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955525 3 - 2200435 CCT i manLeu1.NW_012103754v1 T 134 C 0 s colAng1.NW_012118821v1 1391354 3 - 13651311 CTT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231638 3 - 7082604 CCT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=167091.000000 s hg38.chr2_KI270774v1_alt 127227 35 + 223625 TCTTGTTTGTATGATCCAGTCATTGCTGCAGGAGG s panTro5.chr2A 1416144 35 + 111504155 TCCTGTTTGTATGATCCAGTCATTGCTGCAGGAGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365188 35 + 114371477 TCCTGTTTGTATGATCCAGTCATTGCTGCAGGAGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389604 35 + 1464242 TCCTGTTTGTATGATCCAGTCATTGCTGCAGGAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110664 35 + 81552678 TCTTGTTGGTATGGTGTGGCCAATGCTGCAGGACG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440528 35 + 108979918 TCCTGTTTTTATGGTGTAGTCAGTGCCACAGGATG i rheMac8.chr13 C 0 T 134 s macFas5.chr13 1412836 35 - 111193037 TCTTGTTTGTACGATGTGGTCAATGCCACACCACC i macFas5.chr13 T 134 C 0 s macNem1.NW_012011978v1 1443480 35 + 3644372 TCGTGCTTGTATGATCTAGTCATTGCTGCAGGAGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397752 35 - 10304083 TCGTGCTTGTATGATCTAGTCATTGCTGCAGGAGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1468076 35 - 107702431 TCTTGTTTGTGTGGTGTAGTCAGTCCTGCAGGAGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955528 35 - 2200435 TCTTGTTTGCATGGTGTAGTCCGTGCCGCAGGATG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391357 35 - 13651311 TCTTGTTTGCATGGTGTAGTCTGTGCCGCAGGATG i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231641 35 - 7082604 TCTTGTTTGCATAATGTGGTCAGTGCTGCAGGAGC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=18960.000000 s hg38.chr2_KI270774v1_alt 127262 3 + 223625 TAC s panTro5.chr2A 1416179 3 + 111504155 TAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365223 3 + 114371477 TAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389639 3 + 1464242 TAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110699 3 + 81552678 TAC i nomLeu3.chr19 C 0 T 67 s rheMac8.chr13 1440429 3 + 108979918 TAC i rheMac8.chr13 T 134 C 0 s macFas5.chr13 1412871 3 - 111193037 TAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443515 3 + 3644372 TAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397787 3 - 10304083 TAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1468111 3 - 107702431 CAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955563 3 - 2200435 TAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391392 3 - 13651311 TAC i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231676 3 - 7082604 TAC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=55472.000000 s hg38.chr2_KI270774v1_alt 127265 9 + 223625 CATGTTGGA s panTro5.chr2A 1416182 9 + 111504155 CATGTTGGA i panTro5.chr2A C 0 T 525 s panPan2.chr2A 1365226 9 + 114371477 CATGTTGGA i panPan2.chr2A C 0 T 134 s gorGor5.CYUI01015607v1 1389642 9 + 1464242 CATGTTGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110635 9 + 81552678 CATGTTGGA i nomLeu3.chr19 T 67 C 0 s rheMac8.chr13 1440432 9 + 108979918 CATGTTGGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412874 9 - 111193037 CATGTTGGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443518 9 + 3644372 CATGTTGGA i macNem1.NW_012011978v1 C 0 T 2538 s cerAty1.NW_012000820v1 1397790 9 - 10304083 CATGTTGGA i cerAty1.NW_012000820v1 C 0 T 134 s chlSab2.chr14 1468114 9 - 107702431 TACGTTGGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955566 9 - 2200435 CATATTGGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391395 9 - 13651311 CATGTTGCA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231679 9 - 7082604 AGTGTTGGA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=10505.000000 s hg38.chr2_KI270774v1_alt 127274 2 + 223625 AG s panPan2.chr2A 1365101 2 + 114371477 AG i panPan2.chr2A T 134 C 0 s gorGor5.CYUI01015607v1 1389651 2 + 1464242 AG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110644 2 + 81552678 AG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440441 2 + 108979918 AG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412883 2 - 111193037 AG i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397665 2 - 10304083 AG i cerAty1.NW_012000820v1 T 134 C 0 s chlSab2.chr14 1468123 2 - 107702431 AG i chlSab2.chr14 C 0 T 335 s manLeu1.NW_012103754v1 955575 2 - 2200435 AG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391404 2 - 13651311 AG i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231688 2 - 7082604 AG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e macNem1.NW_012011978v1 1443527 2538 + 3644372 T e panTro5.chr2A 1416191 525 + 111504155 T a score=26618.000000 s hg38.chr2_KI270774v1_alt 127276 6 + 223625 GGAACG s panPan2.chr2A 1365103 6 + 114371477 GGAATG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389653 6 + 1464242 GGAATG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110646 6 + 81552678 GGAATG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440443 6 + 108979918 GGAATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412885 6 - 111193037 GGAATG i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397667 6 - 10304083 GGAATG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467790 6 - 107702431 GGAATG i chlSab2.chr14 T 335 C 0 s manLeu1.NW_012103754v1 955577 6 - 2200435 GGAATG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391406 6 - 13651311 AGAATG i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231690 6 - 7082604 AAAATG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e macNem1.NW_012011978v1 1443527 2538 + 3644372 T e panTro5.chr2A 1416191 525 + 111504155 T a score=50236.000000 s hg38.chr2_KI270774v1_alt 127282 11 + 223625 GGGCAGGCTCG s panTro5.chr2A 1415666 11 + 111504155 GGGCAGGCTCC i panTro5.chr2A T 525 C 0 s panPan2.chr2A 1365109 11 + 114371477 GGGCAGGCTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389659 10 + 1464242 -GGCAGGCTCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110652 11 + 81552678 GGCCAGACTCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440449 11 + 108979918 GGGCGGGTTCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412891 11 - 111193037 GGGCGGGTTCC i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397673 11 - 10304083 GGGCAGGCTCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467796 11 - 107702431 GGGCAGGCAGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955583 11 - 2200435 GGGCAGGCTGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391412 11 - 13651311 GGGCAAGCTCC i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231696 11 - 7082604 GGGCAGGCTCC i saiBol1.JH378218 C 0 T 201 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e macNem1.NW_012011978v1 1443527 2538 + 3644372 T a score=110214.000000 s hg38.chr2_KI270774v1_alt 127293 29 + 223625 TTCTTGTTTGTATGATCCAATCACTGCTG s panTro5.chr2A 1415677 29 + 111504155 TTCTTGTTTGTATGATCCAGTCATTGCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365120 29 + 114371477 TTCTTGTTTGTATGATCCAGTCATTGTTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389669 29 + 1464242 TTCCTGCTTGTATGATCCAGTCATTGCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110663 29 + 81552678 TTCTTGTTGGTATGGTGTGGCCAATGCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440460 29 + 108979918 TTCTTGTTTGTATGATCTACTCACTGCCG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412902 29 - 111193037 TTCTTGTTTGTATGATCTACTCACTGCCG i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397684 29 - 10304083 TTCGTGCTTGTATGGTGTAGTCCGTGAAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467807 29 - 107702431 TTCTTGTTTTTGTGGTGTAGTCAGTGCCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955594 29 - 2200435 TTCTTGTTTTTGTGGTGTAGTCAGTGCCG i manLeu1.NW_012103754v1 C 0 T 134 s colAng1.NW_012118821v1 1391423 29 - 13651311 TTCTTGTTTGTATGATCTACTCATTACCA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231506 29 - 7082604 TTTTTGTTTGTTTGATGTGGTCAGTGCCG i saiBol1.JH378218 T 201 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e macNem1.NW_012011978v1 1443527 2538 + 3644372 T a score=33254.000000 s hg38.chr2_KI270774v1_alt 127322 8 + 223625 CAGGAGGC s panTro5.chr2A 1415706 8 + 111504155 CAGGAGGT i panTro5.chr2A C 0 I 132 s panPan2.chr2A 1365149 8 + 114371477 CAGGAGGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389698 8 + 1464242 CAGGAGGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110692 8 + 81552678 CAGGACGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440489 8 + 108979918 CAGGATGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412931 8 - 111193037 CAGGAACT i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397713 8 - 10304083 CAGGAACT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467836 8 - 107702431 CAGGAGGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955489 8 - 2200435 CAGGAGCT i manLeu1.NW_012103754v1 T 134 C 0 s colAng1.NW_012118821v1 1391452 8 - 13651311 CAGGAGCT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231535 8 - 7082604 CAGGAGCT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e macNem1.NW_012011978v1 1443527 2538 + 3644372 T a score=13326.000000 s hg38.chr2_KI270774v1_alt 127330 2 + 223625 AC s panTro5.chr2A 1415846 2 + 111504155 AC i panTro5.chr2A I 132 C 0 s panPan2.chr2A 1365157 2 + 114371477 AC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389706 2 + 1464242 AC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110700 2 + 81552678 AC i nomLeu3.chr19 C 0 T 241 s rheMac8.chr13 1440497 2 + 108979918 AC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412939 2 - 111193037 AC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1440989 2 + 3644372 AC i macNem1.NW_012011978v1 T 2538 C 0 s cerAty1.NW_012000820v1 1397721 2 - 10304083 AC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467844 2 - 107702431 AC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955497 2 - 2200435 AC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391460 2 - 13651311 AC i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231543 2 - 7082604 AT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=5159.000000 s hg38.chr2_KI270774v1_alt 127332 1 + 223625 C s panTro5.chr2A 1415848 1 + 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365159 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389708 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 T 133 s rheMac8.chr13 1440499 1 + 108979918 C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412941 1 - 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1440991 1 + 3644372 C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397723 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467846 1 - 107702431 T i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955499 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391462 1 - 13651311 C i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231545 1 - 7082604 C i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e nomLeu3.chr19 1110702 241 + 81552678 T a score=56662.000000 s hg38.chr2_KI270774v1_alt 127333 12 + 223625 GTGTTGGAAGGG s panTro5.chr2A 1415849 12 + 111504155 GTGTTGGAAGGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365160 12 + 114371477 ATGTTGGAAGGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389576 12 + 1464242 GTGTTGGAAGGG i gorGor5.CYUI01015607v1 T 133 C 0 s rheMac8.chr13 1440500 12 + 108979918 ATGTTGTAAGCG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412942 12 - 111193037 ATGTTGTAAGCG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1440992 12 + 3644372 ATGTTGGAAGGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397724 12 - 10304083 ATGTTGGAAGGG i cerAty1.NW_012000820v1 C 0 T 134 s chlSab2.chr14 1467847 12 - 107702431 ATGTTGGAAGGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955500 12 - 2200435 ATGTTGGAAGGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391463 12 - 13651311 ATGTTGTAAGTG i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231546 12 - 7082604 ATGTTGGAAGAA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e nomLeu3.chr19 1110702 241 + 81552678 T a score=40497.000000 s hg38.chr2_KI270774v1_alt 127345 9 + 223625 AATGGAGCT s panTro5.chr2A 1415861 8 + 111504155 AATGG-GCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365172 9 + 114371477 AATGGGGCC i panPan2.chr2A C 0 T 3329 s gorGor5.CYUI01015607v1 1389588 9 + 1464242 AATGGAGCC i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1440512 9 + 108979918 AATGGAGCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412954 9 - 111193037 AATGGAGCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441004 9 + 3644372 AATGGGGCG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397602 9 - 10304083 AATGGAGCA i cerAty1.NW_012000820v1 T 134 C 0 s chlSab2.chr14 1467859 9 - 107702431 AATGGAGCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955512 9 - 2200435 AATGGGGCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391475 9 - 13651311 AATGGAGCA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231558 9 - 7082604 AATGGGGCA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e nomLeu3.chr19 1110702 241 + 81552678 T a score=28336.000000 s hg38.chr2_KI270774v1_alt 127354 5 + 223625 GGCTC s panTro5.chr2A 1415869 5 + 111504155 GGCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361852 5 + 114371477 GGCTC i panPan2.chr2A T 3329 C 0 s gorGor5.CYUI01015607v1 1389597 5 + 1464242 GGCTC i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1440521 5 + 108979918 GGCTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412963 5 - 111193037 GGCTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441013 5 + 3644372 GGTTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397611 5 - 10304083 GGCTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467868 5 - 107702431 GGTTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955521 5 - 2200435 GGCTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391484 5 - 13651311 GGCTC i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231567 5 - 7082604 GGCTC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e nomLeu3.chr19 1110702 241 + 81552678 T a score=7800.000000 s hg38.chr2_KI270774v1_alt 127359 1 + 223625 C s panTro5.chr2A 1415874 1 + 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361857 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389602 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110461 1 + 81552678 C i nomLeu3.chr19 T 241 C 0 s rheMac8.chr13 1440526 1 + 108979918 C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412968 1 - 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441018 1 + 3644372 C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397616 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467873 1 - 107702431 C i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955526 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391489 1 - 13651311 C i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231572 1 - 7082604 C i saiBol1.JH378218 C 0 T 67 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=253393.000000 s hg38.chr2_KI270774v1_alt 127360 49 + 223625 TTCTTGTTTGTATGATCCAGTCATTGCTGCAGGAGGTACCATGTTGGAA s panTro5.chr2A 1415875 49 + 111504155 TTCTTGTTTGTATGATCCAGTCATTGCTGCAGGAGGTACCATGTTGGAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361858 49 + 114371477 TTCCTGTTTGTATGATCTAGTCAGTGCTGCAGGACGTACTATGTTGTAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389603 49 + 1464242 TTCCTGTTTGTATGATCCAGTCATTGCTGCAGGAGGTACCATGTTGGAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110462 49 + 81552678 TTCTTGTTTGTATGATGTGGTCAGTGCCACAGGAACTACCATTTTGGAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440527 49 + 108979918 TTCCTGTTTTTATGGTGTAGTCAGTGCCACAGGATGTACCATGTTGTAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1412969 49 - 111193037 TTCCTGTTTTTATGGTGTAGTCAGTGCCACAGGATGTACCATGTTGTAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441019 49 + 3644372 TTCTTGTTTGTATGATCTACTCACTGCCGCAGGAACTACCATGTTGTAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397617 49 - 10304083 TTCTTGCTTGTATGGTGTAGTCCGTGAAGCAGGAACTACCATGTTGGAA i cerAty1.NW_012000820v1 C 0 T 2121 s chlSab2.chr14 1467874 49 - 107702431 TTCCTGTTTGTATGGTGTAGTCAGTCCCGCAGGAGGCACTACGTTGGAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955527 49 - 2200435 TTCTTGTTTGCATGGTGTAGTCCGTGCCGCAGGATGTACCATATTGGAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391490 49 - 13651311 TTCCTGTTGGTATGGTGTAGTCAGTGCCGCAGGAGCTACCATGTTGGAA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231506 49 - 7082604 TTTTTGTTTGTTTGATGTGGTCAGTGCCGCAGGAGCTATCATGTTGGAA i saiBol1.JH378218 T 67 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=60460.000000 s hg38.chr2_KI270774v1_alt 127409 12 + 223625 GGGAATGGAGCT s panTro5.chr2A 1415924 12 + 111504155 GGGAATGGAGCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361907 12 + 114371477 GTGAATGGAGCA i panPan2.chr2A C 0 T 267 s gorGor5.CYUI01015607v1 1389652 11 + 1464242 GGGAATGG-GCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110511 12 + 81552678 GGGAATGGAGCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440576 12 + 108979918 GCGAATGGAGCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413018 12 - 111193037 GCGAATGGAGCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441068 12 + 3644372 GCGAATGGAGCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395545 12 - 10304083 GGGAATGGAGCA i cerAty1.NW_012000820v1 T 2121 C 0 s chlSab2.chr14 1467923 12 - 107702431 GGGAATAGGGCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955576 12 - 2200435 GGGAATGGGGCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391539 12 - 13651311 GAGAACGGGGCA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231555 12 - 7082604 GAAAATGGGGCA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=227312.000000 s hg38.chr2_KI270774v1_alt 127421 43 + 223625 GGCTCCTTCTTGTTTGTATGATGCAGTCATTGCTGCAGGAGGT s panTro5.chr2A 1415936 43 + 111504155 GGCTCCTTCTTGTTTGTATGGTGTAGGCAGTGCCACAGGAACT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361652 43 + 114371477 GGGTCCTTCTTGTTTCCATGGTGTAGTCATTGCCGCAGGAGGC i panPan2.chr2A T 267 C 0 s gorGor5.CYUI01015607v1 1389663 43 + 1464242 GGCTCCTTCCTGCTTGTATGATCCAGTCATTGCTGCAGGAGGT i gorGor5.CYUI01015607v1 C 0 T 2406 s nomLeu3.chr19 1110523 43 + 81552678 GGCTCCTTCTTGTTTATATGGTGTAGTCATTGCCACAGGAGGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440588 43 + 108979918 GGCTCCTTCCTGTTTTTATGGTGTAGTCACTGCCGCAGGAACT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413030 43 - 111193037 GGCTCCTTCCTGGTTTTATGGTGTAGTCACTGCCGCAGGAACT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441080 43 + 3644372 GGCTTCTTCCTGTTTTTATGGTGTAGTCAGTCCCGCAGGAGGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395557 43 - 10304083 GGTTCCTTCCTGTTTTTATGGTGTAGTCAGTCCCGCAGGAGGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467935 43 - 107702431 GGGTCCTTCTTGTTTGTATGGTGTAGTCAGTCCTGCAGGAGGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955588 43 - 2200435 GGCTGCTTCTTGTTTTTGTGGTGTAGTCAGTGCCGCAGGAGGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391551 43 - 13651311 GGTTCCTTCTTGTTGGTATGGTGTAGTCAGTGCCGCAGGAGGC i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231567 43 - 7082604 GGCTCCTTCTTGTTTGTATAGTGTGGTGAGTGCTGCAGAAGGC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=102147.000000 s hg38.chr2_KI270774v1_alt 127464 18 + 223625 ACTGTGTTGGAAGGGAAT s panTro5.chr2A 1415979 18 + 111504155 ACCATGTTGGAAGGGAAC i panTro5.chr2A C 0 T 133 s panPan2.chr2A 1361695 18 + 114371477 ACTATGTTGGAAGGGAAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387300 18 + 1464242 ACTACGTTGGAAGGGAAC i gorGor5.CYUI01015607v1 T 2406 C 0 s nomLeu3.chr19 1110566 18 + 81552678 ACTATGTTGGAAGGGAAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440631 18 + 108979918 ACCATGTTGTAAGCGAAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413073 18 - 111193037 ACCATGTTGTAAGCGAAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441123 18 + 3644372 ACTACGTTGGAAGGGAAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395600 18 - 10304083 ACTACGTTGGAAGGGAAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467978 18 - 107702431 ACTACATTGGAAGGGAAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955631 18 - 2200435 ACTATGTTGGAAGGGAAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391594 18 - 13651311 ACTACGTTGGAAGGGAAT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231610 18 - 7082604 ACTGTGTTGGAATAGAAT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=1749.000000 s hg38.chr2_KI270774v1_alt 127482 1 + 223625 G s panPan2.chr2A 1361713 1 + 114371477 A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387318 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110584 1 + 81552678 A i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440649 1 + 108979918 G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413091 1 - 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441141 1 + 3644372 G i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395618 1 - 10304083 A i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467996 1 - 107702431 A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955649 1 - 2200435 G i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391612 1 - 13651311 A i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231628 1 - 7082604 G i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e panTro5.chr2A 1415997 133 + 111504155 T a score=105424.000000 s hg38.chr2_KI270774v1_alt 127483 17 + 223625 GGGCAGGCTCCTTCTTG s panTro5.chr2A 1415864 17 + 111504155 GGGCAGGCTCCTTCTTG i panTro5.chr2A T 133 C 0 s panPan2.chr2A 1361714 17 + 114371477 GGGCAGGGTCCTTCTTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387319 17 + 1464242 GGGCAGGGTCCTTCTTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110585 17 + 81552678 GGGCAGGGTCCTTCCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440650 17 + 108979918 GAGCAGGCTCCTTCCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413092 17 - 111193037 GAGCAGGCTCCTTCCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441142 17 + 3644372 GGGCAGGTTCCTTCTTG i macNem1.NW_012011978v1 C 0 I 2244 s cerAty1.NW_012000820v1 1395619 17 - 10304083 GGGCAGGGTCCTTCTTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1467997 17 - 107702431 GGGCAGGGTCCTTCTTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955650 17 - 2200435 GAGCAGGTGCCTTCCTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391613 17 - 13651311 GGGCAGGGTCCTTCTTG i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231629 17 - 7082604 GGACAGGCTCCTTCTTG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=264266.000000 s hg38.chr2_KI270774v1_alt 127500 60 + 223625 TTTGTATGATCCAGTCATTGCTGCAGGAGGCACCATGTTGGAAGGAAATGGGGCAGGCTC s panTro5.chr2A 1415881 60 + 111504155 TTTGTATGATCCAGTCATTGCTGCAGGAGGTACCATGTTGGAAGGGAATGGAGCCGGCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361731 60 + 114371477 TTTGTATGATCTAGTCATTGCCGCGGGAGGCACTATGTTGGAAGGGAATAGGGCAGGGTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387336 60 + 1464242 TTTGTATGATCTAGTCATTGCCGCAGGAGGTACTACCTTGGAAGGGAATAGGGCAGGGTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110602 60 + 81552678 TTTGTATGGTGTAGTCAGTGCCGCAGGAGCCACCATGTTGGAAGGGAATGGGCCAGACTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440667 60 + 108979918 TTTTTATGGTGTAGTCAGTGCCACAGGATGTACCATGTTGTAAGCGAATGGAGCAGGCTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413109 60 - 111193037 TTTTTATGGTGTAGTCAGTGCCACAGGATGTACCATGTTGTAAGCGAATGGAGCAGGCTC i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1395636 60 - 10304083 TTTGTATGGTGTAGTCAGTGCCGCAGGAGCTACCATGTTGGAAGGGAACGGGGCAGGTTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1468014 60 - 107702431 TTTGTGTGGTGTAGTCAGTCCTGCAGGAGGCACTACGTTGGAAGGGAATAGGGCAGGGTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955667 60 - 2200435 TTTTTATGGTGTAGTCAGTGCCACAGGAGGCACTACGTTGGAAGGGAATAGGGCAGGGTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391630 60 - 13651311 TTGGTATGGTGTGGCCAGTGCTGCAGGACGTACCATGTTGGAAGAGAATGGGGCAGGCTC i colAng1.NW_012118821v1 C 0 T 141 s saiBol1.JH378218 1231646 60 - 7082604 TTTGCATAATGTGGTCAGTGCTGCAGGAGCTACAGTGTTGGAAGAAAATGGGGCAGGCTC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e macNem1.NW_012011978v1 1441159 2244 + 3644372 I a score=15510.000000 s hg38.chr2_KI270774v1_alt 127560 3 + 223625 CTT s panTro5.chr2A 1415941 3 + 111504155 CTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361791 3 + 114371477 CTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387396 3 + 1464242 CTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110662 3 + 81552678 CTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440727 3 + 108979918 CTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413169 3 - 111193037 CTT i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1395696 3 - 10304083 CTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1468074 3 - 107702431 CTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955727 3 - 2200435 CTT i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1231706 3 - 7082604 CTT i saiBol1.JH378218 C 0 T 67 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391690 141 - 13651311 T e macNem1.NW_012011978v1 1441159 2244 + 3644372 I a score=5500.000000 s hg38.chr2_KI270774v1_alt 127563 1 + 223625 C s panTro5.chr2A 1415944 1 + 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361794 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387399 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110665 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440730 1 + 108979918 C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413172 1 - 111193037 C i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1395699 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 I 1956 s chlSab2.chr14 1468077 1 - 107702431 C i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955730 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1231642 1 - 7082604 C i saiBol1.JH378218 T 67 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391690 141 - 13651311 T e macNem1.NW_012011978v1 1441159 2244 + 3644372 I a score=104202.000000 s hg38.chr2_KI270774v1_alt 127564 36 + 223625 CTGTTTGTATGATCCAGTCACTGCTGCAGGAGTCAC s panTro5.chr2A 1415945 36 + 111504155 TTGTTTGTATGGTGTAGGCAGTGCCACAGGAACTAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361795 36 + 114371477 TTGTTTCCATGGTGTAGTCAGTGCCACAGGAGGCAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387400 36 + 1464242 TTGTTTCCATGGTGTAGTCAGTGCCGCAGGAGGCAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110666 36 + 81552678 TTGTTGGTATGGTGTGGCCAATGCTGCAGGACGTAC i nomLeu3.chr19 C 0 I 1945 s rheMac8.chr13 1440731 36 + 108979918 CTGTTTTTATGGTGTAGTCAGTCCTGCAGGAGGCAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413173 36 - 111193037 CTGTTTTTATGGTGTAGTCAGTCCCGCAGGAGGCAC i macFas5.chr13 C 0 C 0 s chlSab2.chr14 1468078 36 - 107702431 TTGTTTGTGTGGTGTAGTCAGTCCTGCAGGAGGCAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955731 36 - 2200435 TTGTTTGTATGGTGTAGTCAGTGCCACAGGAGCTAC i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1231643 36 - 7082604 TTGTTTGCATAATGTGGTCAGTGCTGCAGGAGCTAC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391690 141 - 13651311 T e cerAty1.NW_012000820v1 1395700 1956 - 10304083 I e macNem1.NW_012011978v1 1441159 2244 + 3644372 I a score=28987.000000 s hg38.chr2_KI270774v1_alt 127600 11 + 223625 CATGTTGGAAG s panTro5.chr2A 1415981 11 + 111504155 CATGTTGGAAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361831 11 + 114371477 TATGTTGGAAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387436 11 + 1464242 TATTTTGGAAG i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1440767 11 + 108979918 TACGTTGGAAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413209 11 - 111193037 TACGTTGGAAG i macFas5.chr13 C 0 C 0 s chlSab2.chr14 1468114 11 - 107702431 TACGTTGGAAG i chlSab2.chr14 C 0 I 6009 s manLeu1.NW_012103754v1 955767 11 - 2200435 CATGTTGGAAG i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1231679 11 - 7082604 AGTGTTGGAAG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391690 141 - 13651311 T e cerAty1.NW_012000820v1 1395700 1956 - 10304083 I e macNem1.NW_012011978v1 1441159 2244 + 3644372 I e nomLeu3.chr19 1110702 1945 + 81552678 I a score=5870.000000 s hg38.chr2_KI270774v1_alt 127611 5 + 223625 GGAA-T s panTro5.chr2A 1415992 6 + 111504155 GGAACT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361842 5 + 114371477 AGAA-T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387447 5 + 1464242 AGAA-T i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1440778 5 + 108979918 GGAA-C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413220 5 - 111193037 GGAA-C i macFas5.chr13 C 0 C 0 s manLeu1.NW_012103754v1 955778 5 - 2200435 GGAA-T i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1231690 5 - 7082604 AAAA-T i saiBol1.JH378218 C 0 T 63 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391690 141 - 13651311 T e chlSab2.chr14 1468125 6009 - 107702431 I e cerAty1.NW_012000820v1 1395700 1956 - 10304083 I e macNem1.NW_012011978v1 1441159 2244 + 3644372 I e nomLeu3.chr19 1110702 1945 + 81552678 I a score=1440.000000 s hg38.chr2_KI270774v1_alt 127616 3 + 223625 GGG- s panTro5.chr2A 1415998 3 + 111504155 GGG- i panTro5.chr2A C 0 T 398 s panPan2.chr2A 1361847 3 + 114371477 GGG- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387452 3 + 1464242 GGG- i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1440783 4 + 108979918 GGGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413225 4 - 111193037 GGGG i macFas5.chr13 C 0 C 0 s manLeu1.NW_012103754v1 955783 4 - 2200435 GGGG i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1231695 63 - 7082604 T e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391690 141 - 13651311 T e chlSab2.chr14 1468125 6009 - 107702431 I e cerAty1.NW_012000820v1 1395700 1956 - 10304083 I e macNem1.NW_012011978v1 1441159 2244 + 3644372 I e nomLeu3.chr19 1110702 1945 + 81552678 I a score=53404.000000 s hg38.chr2_KI270774v1_alt 127619 14 + 223625 CAGGCTCCTTCTTG s panTro5.chr2A 1415603 14 + 111504155 CAGGCTCCTTCTTG i panTro5.chr2A T 398 C 0 s panPan2.chr2A 1361850 14 + 114371477 CAGGCTCCTTCCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387455 14 + 1464242 CAGGCTCCTTCCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112647 14 + 81552678 CAGGCTCCTTCTTG i nomLeu3.chr19 I 1945 C 0 s rheMac8.chr13 1440787 14 + 108979918 CAGGTTCCTTCTTG i rheMac8.chr13 C 0 I 2256 s macFas5.chr13 1413229 14 - 111193037 CAGGTTGCTTCTTG i macFas5.chr13 C 0 I 2330 s manLeu1.NW_012103754v1 955787 14 - 2200435 CAGGTTCCTTCTTG i manLeu1.NW_012103754v1 C 0 T 142 s colAng1.NW_012118821v1 1391549 14 - 13651311 CAGGTTCCTTCTTG i colAng1.NW_012118821v1 T 141 C 0 s saiBol1.JH378218 1231632 14 - 7082604 CAGGCTCCTTCTTG i saiBol1.JH378218 T 63 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e chlSab2.chr14 1468125 6009 - 107702431 I e cerAty1.NW_012000820v1 1395700 1956 - 10304083 I e macNem1.NW_012011978v1 1441159 2244 + 3644372 I a score=30944.000000 s hg38.chr2_KI270774v1_alt 127633 18 + 223625 TTTGTATGATCCAATCAC s panTro5.chr2A 1415617 18 + 111504155 TTTGTATGATCCAGTCAT i panTro5.chr2A C 0 I 66 s panPan2.chr2A 1361864 18 + 114371477 TTTGTATGATCTAGTCAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387469 18 + 1464242 TTTGTATGATCTAGTCAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112661 18 + 81552678 TTTGTATGATCTAGTTGT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1415573 18 - 111193037 CTTGTATGATCTAGTCAT i macFas5.chr13 I 2330 C 0 s colAng1.NW_012118821v1 1391563 18 - 13651311 TTGGTATGGTGTAGTCAG i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231646 18 - 7082604 TTTGCATAATGTGGTCAG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e manLeu1.NW_012103754v1 955801 142 - 2200435 T e chlSab2.chr14 1468125 6009 - 107702431 I e cerAty1.NW_012000820v1 1395700 1956 - 10304083 I e macNem1.NW_012011978v1 1441159 2244 + 3644372 I e rheMac8.chr13 1440801 2256 + 108979918 I a score=47688.000000 s hg38.chr2_KI270774v1_alt 127651 24 + 223625 TGCTGCAGGAGGCACCATGTTGGA s panTro5.chr2A 1415701 24 + 111504155 TGCTGCAGGAGGTACCGTGTTGGA i panTro5.chr2A I 66 C 0 s panPan2.chr2A 1361882 24 + 114371477 TGCTGCAGGACGTACTATGTTGTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387487 24 + 1464242 TGCTGCAGGAGCTACCATGTTGTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112679 24 + 81552678 TGCCACAGGAGGTACCATGTTGGA i nomLeu3.chr19 C 0 T 124 s macFas5.chr13 1415591 24 - 111193037 TGCTGCAGGAGGTATCATGTTGGA i macFas5.chr13 C 0 T 2464 s colAng1.NW_012118821v1 1391581 24 - 13651311 TGCCGCAGGAGGCACTACGTTGGA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231664 24 - 7082604 TGCTGCAGGAGCTACAGTGTTGGA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e manLeu1.NW_012103754v1 955801 142 - 2200435 T e chlSab2.chr14 1468125 6009 - 107702431 I e cerAty1.NW_012000820v1 1395700 1956 - 10304083 I e macNem1.NW_012011978v1 1441159 2244 + 3644372 I e rheMac8.chr13 1440801 2256 + 108979918 I a score=9875.000000 s hg38.chr2_KI270774v1_alt 127675 7 + 223625 AGGGAAT s panTro5.chr2A 1415725 7 + 111504155 AGGGAAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361906 7 + 114371477 AGTGAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387511 7 + 1464242 AGTGAAT i gorGor5.CYUI01015607v1 C 0 C 0 s macFas5.chr13 1413151 7 - 111193037 AGCGAAT i macFas5.chr13 T 2464 C 0 s colAng1.NW_012118821v1 1391605 7 - 13651311 AGGGAAT i colAng1.NW_012118821v1 C 0 T 197 s saiBol1.JH378218 1231688 7 - 7082604 AGAAAAT i saiBol1.JH378218 C 0 I 1 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e manLeu1.NW_012103754v1 955801 142 - 2200435 T e chlSab2.chr14 1468125 6009 - 107702431 I e cerAty1.NW_012000820v1 1395700 1956 - 10304083 I e macNem1.NW_012011978v1 1441159 2244 + 3644372 I e rheMac8.chr13 1440801 2256 + 108979918 I e nomLeu3.chr19 1112703 124 + 81552678 T a score=3000.000000 s hg38.chr2_KI270774v1_alt 127682 2 + 223625 GG s panTro5.chr2A 1415732 2 + 111504155 GG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361913 2 + 114371477 GG i panPan2.chr2A C 0 I 1 s gorGor5.CYUI01015607v1 1387518 2 + 1464242 GG i gorGor5.CYUI01015607v1 C 0 I 2140 s macFas5.chr13 1413158 2 - 111193037 GG i macFas5.chr13 C 0 I 1 s saiBol1.JH378218 1231696 2 - 7082604 GG i saiBol1.JH378218 I 1 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T e manLeu1.NW_012103754v1 955801 142 - 2200435 T e chlSab2.chr14 1468125 6009 - 107702431 I e cerAty1.NW_012000820v1 1395700 1956 - 10304083 I e macNem1.NW_012011978v1 1441159 2244 + 3644372 I e rheMac8.chr13 1440801 2256 + 108979918 I e nomLeu3.chr19 1112703 124 + 81552678 T a score=2100.000000 s hg38.chr2_KI270774v1_alt 127684 1 + 223625 G s panTro5.chr2A 1415734 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361916 1 + 114371477 G i panPan2.chr2A I 1 C 0 s gorGor5.CYUI01015607v1 1389660 1 + 1464242 G i gorGor5.CYUI01015607v1 I 2140 C 0 s nomLeu3.chr19 1112579 1 + 81552678 G i nomLeu3.chr19 T 124 C 0 s macFas5.chr13 1413161 1 - 111193037 G i macFas5.chr13 I 1 C 0 s saiBol1.JH378218 1231698 1 - 7082604 G i saiBol1.JH378218 C 0 T 67 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T e manLeu1.NW_012103754v1 955801 142 - 2200435 T e chlSab2.chr14 1468125 6009 - 107702431 I e cerAty1.NW_012000820v1 1395700 1956 - 10304083 I e macNem1.NW_012011978v1 1441159 2244 + 3644372 I e rheMac8.chr13 1440801 2256 + 108979918 I a score=51901.000000 s hg38.chr2_KI270774v1_alt 127685 36 + 223625 CAGGCTCCTTCTTGTTTGTATGATCCAGTCATTGCT s panTro5.chr2A 1415735 36 + 111504155 CAGGCTCCTTCTTGTTTGTATGATCCAGTCATTGCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361917 36 + 114371477 CAGGCTCATTCCTGTTTTTATGGTGTAGTCATTGCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389661 36 + 1464242 CAGGCTCCTTCCTGCTTGTATGATCCAGTCATTGCT i gorGor5.CYUI01015607v1 C 0 T 2272 s nomLeu3.chr19 1112580 36 + 81552678 CAGGCTTCTTCTTGTTTGTATGGTGTAGTCAATGCC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1413162 36 - 111193037 CAGGCTCCTTCCTGTTTTTATGGTGTAGTCAGTCCC i macFas5.chr13 C 0 C 0 s saiBol1.JH378218 1231632 36 - 7082604 CAGGCTCCTTCTTGTTTGCATAATGTGGTCAGTGCT i saiBol1.JH378218 T 67 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T e manLeu1.NW_012103754v1 955801 142 - 2200435 T e chlSab2.chr14 1468125 6009 - 107702431 I e cerAty1.NW_012000820v1 1395700 1956 - 10304083 I e macNem1.NW_012011978v1 1441159 2244 + 3644372 I e rheMac8.chr13 1440801 2256 + 108979918 I a score=57055.000000 s hg38.chr2_KI270774v1_alt 127721 40 + 223625 GCAGGAGGCACTGTGTTGGAAGGGAAT-GGGCAGGCTCCTT s panTro5.chr2A 1415771 40 + 111504155 GCAGGAGGCACCGTGTTGGAAGGGAAT-GGGCAGGCTCCTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361953 41 + 114371477 GCAGGAGGTACTACGTTGGAAGCGAGTAGGGCAGGGTCCTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387425 40 + 1464242 GCAGGAGGCACTATTTTGGAAGAGAAT-GGGCAGGCTCCTT i gorGor5.CYUI01015607v1 T 2272 C 0 s nomLeu3.chr19 1112616 41 + 81552678 GCAGGAACTACCATGTTGGAAGGGAATGGGGCAGGCTCCTT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1413198 41 - 111193037 GCAGGAGGCACTACGTTGGAAGGGAACGGGGCAGGTTGCTT i macFas5.chr13 C 0 C 0 s saiBol1.JH378218 1231668 41 - 7082604 GCAGGAGCTACAGTGTTGGAAGAAAATGGGGCAGGCTCCTT i saiBol1.JH378218 C 0 T 67 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T e manLeu1.NW_012103754v1 955801 142 - 2200435 T e chlSab2.chr14 1468125 6009 - 107702431 I e cerAty1.NW_012000820v1 1395700 1956 - 10304083 I e macNem1.NW_012011978v1 1441159 2244 + 3644372 I e rheMac8.chr13 1440801 2256 + 108979918 I a score=5190.000000 s hg38.chr2_KI270774v1_alt 127761 3 + 223625 CTT s panTro5.chr2A 1415811 3 + 111504155 CTT i panTro5.chr2A C 0 T 66 s panPan2.chr2A 1361994 3 + 114371477 CTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387465 3 + 1464242 CCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112657 3 + 81552678 CTT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1413239 3 - 111193037 CTT i macFas5.chr13 C 0 C 0 s saiBol1.JH378218 1231642 3 - 7082604 CTT i saiBol1.JH378218 T 67 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T e manLeu1.NW_012103754v1 955801 142 - 2200435 T e chlSab2.chr14 1468125 6009 - 107702431 I e cerAty1.NW_012000820v1 1395700 1956 - 10304083 I e macNem1.NW_012011978v1 1441159 2244 + 3644372 I e rheMac8.chr13 1440801 2256 + 108979918 I a score=2100.000000 s hg38.chr2_KI270774v1_alt 127764 1 + 223625 G s panTro5.chr2A 1415748 1 + 111504155 G i panTro5.chr2A T 66 C 0 s panPan2.chr2A 1361997 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387468 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112660 1 + 81552678 G i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1413242 1 - 111193037 G i macFas5.chr13 C 0 I 2330 s saiBol1.JH378218 1231645 1 - 7082604 G i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T e manLeu1.NW_012103754v1 955801 142 - 2200435 T e chlSab2.chr14 1468125 6009 - 107702431 I e cerAty1.NW_012000820v1 1395700 1956 - 10304083 I e macNem1.NW_012011978v1 1441159 2244 + 3644372 I e rheMac8.chr13 1440801 2256 + 108979918 I a score=59406.000000 s hg38.chr2_KI270774v1_alt 127765 42 + 223625 TTTGTATGATCCAGTCATTGCTGCAGGAGGTACCCTGTTGGA s panTro5.chr2A 1415749 42 + 111504155 TTTGTATGATCCAGTCATTGCTGCAGGAGGCACCGTGTTGGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1361998 42 + 114371477 TTTCCATGGTGTAGTCAGTGCCGCAGGAGGCACTATGTTGGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387469 42 + 1464242 TTTGTATGATCTAGTCATTGCTGCAGGAGCTACCATGTTGTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112661 42 + 81552678 TTTGTATGATCTAGTTGTTGCCACAGGAGGTACCATGTTGGA i nomLeu3.chr19 C 0 T 124 s macFas5.chr13 1415573 42 - 111193037 CTTGTATGATCTAGTCATTGCTGCAGGAGGTATCATGTTGGA i macFas5.chr13 I 2330 T 124 s saiBol1.JH378218 1231646 42 - 7082604 TTTGCATAATGTGGTCAGTGCTGCAGGAGCTACAGTGTTGGA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T e manLeu1.NW_012103754v1 955801 142 - 2200435 T e chlSab2.chr14 1468125 6009 - 107702431 I e cerAty1.NW_012000820v1 1395700 1956 - 10304083 I e macNem1.NW_012011978v1 1441159 2244 + 3644372 I e rheMac8.chr13 1440801 2256 + 108979918 I a score=3636.000000 s hg38.chr2_KI270774v1_alt 127807 7 + 223625 AGGTAAT s panTro5.chr2A 1415791 7 + 111504155 AGGGAAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362040 7 + 114371477 AGGGAAC i panPan2.chr2A C 0 I 69 s gorGor5.CYUI01015607v1 1387511 7 + 1464242 AGTGAAT i gorGor5.CYUI01015607v1 C 0 C 0 s saiBol1.JH378218 1231688 7 - 7082604 AGAAAAT i saiBol1.JH378218 C 0 I 1 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T e manLeu1.NW_012103754v1 955801 142 - 2200435 T e chlSab2.chr14 1468125 6009 - 107702431 I e cerAty1.NW_012000820v1 1395700 1956 - 10304083 I e macNem1.NW_012011978v1 1441159 2244 + 3644372 I e macFas5.chr13 1415615 124 - 111193037 T e rheMac8.chr13 1440801 2256 + 108979918 I e nomLeu3.chr19 1112703 124 + 81552678 T a score=1200.000000 s hg38.chr2_KI270774v1_alt 127814 2 + 223625 GG s panTro5.chr2A 1415798 2 + 111504155 GG i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387518 2 + 1464242 GG i gorGor5.CYUI01015607v1 C 0 I 1 s saiBol1.JH378218 1231696 2 - 7082604 GG i saiBol1.JH378218 I 1 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T e manLeu1.NW_012103754v1 955801 142 - 2200435 T e chlSab2.chr14 1468125 6009 - 107702431 I e cerAty1.NW_012000820v1 1395700 1956 - 10304083 I e macNem1.NW_012011978v1 1441159 2244 + 3644372 I e macFas5.chr13 1415615 124 - 111193037 T e rheMac8.chr13 1440801 2256 + 108979918 I e nomLeu3.chr19 1112703 124 + 81552678 T e panPan2.chr2A 1362047 69 + 114371477 I a score=28875.000000 s hg38.chr2_KI270774v1_alt 127816 11 + 223625 GCAGGCTCCTT s panTro5.chr2A 1415800 11 + 111504155 GCAGGCTCCTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362116 11 + 114371477 GCAGGCTCCTT i panPan2.chr2A I 69 C 0 s gorGor5.CYUI01015607v1 1387521 11 + 1464242 GCAGGCTCCTT i gorGor5.CYUI01015607v1 I 1 C 0 s nomLeu3.chr19 1112579 11 + 81552678 GCAGGCTTCTT i nomLeu3.chr19 T 124 C 0 s macFas5.chr13 1415491 11 - 111193037 GCAGGCTCCTT i macFas5.chr13 T 124 C 0 s chlSab2.chr14 1474134 11 - 107702431 GCAGGCTCCTT i chlSab2.chr14 I 6009 C 0 s saiBol1.JH378218 1231698 11 - 7082604 GCAGGCTCCTT i saiBol1.JH378218 C 0 T 67 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T e manLeu1.NW_012103754v1 955801 142 - 2200435 T e cerAty1.NW_012000820v1 1395700 1956 - 10304083 I e macNem1.NW_012011978v1 1441159 2244 + 3644372 I e rheMac8.chr13 1440801 2256 + 108979918 I a score=60592.000000 s hg38.chr2_KI270774v1_alt 127827 37 + 223625 CTTGTTTGTATGATCCAGTCATTGCTGCAGGAGGCAA s panTro5.chr2A 1415811 37 + 111504155 CTTGTTTGTATGATCCAGTCATTGCTGCAGGAGGTAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362127 37 + 114371477 CCTGTTTGCATGGTGTAGTGAGTGCCGCAGGAGGCAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387532 37 + 1464242 CCTGTTTGCATGGTGTAGTGAGTGCCACAGGAGGCAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112590 37 + 81552678 CTTGTTTGTATGGTGTAGTCAATGCCGCAGGAACTAC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1415502 37 - 111193037 CTTGTTTGTATGGTGTAGTCCATGAAGCAGGAACTAC i macFas5.chr13 C 0 C 0 s chlSab2.chr14 1474145 37 - 107702431 CTTGTTTGTATGGTGTAGTCCATGAAGCAGGAACTAC i chlSab2.chr14 C 0 C 0 s saiBol1.JH378218 1231642 37 - 7082604 CTTGTTTGCATAATGTGGTCAGTGCTGCAGGAGCTAC i saiBol1.JH378218 T 67 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T e manLeu1.NW_012103754v1 955801 142 - 2200435 T e cerAty1.NW_012000820v1 1395700 1956 - 10304083 I e macNem1.NW_012011978v1 1441159 2244 + 3644372 I e rheMac8.chr13 1440801 2256 + 108979918 I a score=40579.000000 s hg38.chr2_KI270774v1_alt 127864 15 + 223625 CATGCTGGAAGGGAA s panTro5.chr2A 1415848 15 + 111504155 CGTGTTGGAAGGGAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1362164 15 + 114371477 TACGTTGGAAGGGAA i panPan2.chr2A C 0 I 2801 s gorGor5.CYUI01015607v1 1387569 15 + 1464242 TACGTTGGAAGGGAA i gorGor5.CYUI01015607v1 C 0 I 1 s nomLeu3.chr19 1112627 15 + 81552678 CATGTTGGAAGGGAA i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1415539 15 - 111193037 CATGTTGGAAGGGAA i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1397656 15 - 10304083 CATGTTGGAAGGGAA i cerAty1.NW_012000820v1 I 1956 C 0 s chlSab2.chr14 1474182 15 - 107702431 CATGTTGAAAGGGAA i chlSab2.chr14 C 0 C 0 s saiBol1.JH378218 1231679 15 - 7082604 AGTGTTGGAAGAAAA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T e manLeu1.NW_012103754v1 955801 142 - 2200435 T e macNem1.NW_012011978v1 1441159 2244 + 3644372 I e rheMac8.chr13 1440801 2256 + 108979918 I a score=3640.000000 s hg38.chr2_KI270774v1_alt 127879 3 + 223625 TGG- s panTro5.chr2A 1415863 3 + 111504155 TGG- i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387585 3 + 1464242 AGG- i gorGor5.CYUI01015607v1 I 1 C 0 s nomLeu3.chr19 1112642 3 + 81552678 TGG- i nomLeu3.chr19 C 0 T 2125 s macFas5.chr13 1415554 3 - 111193037 TGG- i macFas5.chr13 C 0 T 2530 s cerAty1.NW_012000820v1 1397671 3 - 10304083 TGG- i cerAty1.NW_012000820v1 C 0 I 1 s chlSab2.chr14 1474197 3 - 107702431 TGG- i chlSab2.chr14 C 0 I 1 s saiBol1.JH378218 1231694 4 - 7082604 TGGG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T e manLeu1.NW_012103754v1 955801 142 - 2200435 T e macNem1.NW_012011978v1 1441159 2244 + 3644372 I e rheMac8.chr13 1440801 2256 + 108979918 I e panPan2.chr2A 1362179 2801 + 114371477 I a score=4500.000000 s hg38.chr2_KI270774v1_alt 127882 1 + 223625 G s panTro5.chr2A 1415866 1 + 111504155 G i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387588 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110520 1 + 81552678 G i nomLeu3.chr19 T 2125 C 0 s rheMac8.chr13 1443057 1 + 108979918 G i rheMac8.chr13 I 2256 C 0 s macFas5.chr13 1413027 1 - 111193037 G i macFas5.chr13 T 2530 C 0 s macNem1.NW_012011978v1 1443403 1 + 3644372 G i macNem1.NW_012011978v1 I 2244 C 0 s cerAty1.NW_012000820v1 1397675 1 - 10304083 G i cerAty1.NW_012000820v1 I 1 C 0 s chlSab2.chr14 1474201 1 - 107702431 G i chlSab2.chr14 I 1 C 0 s saiBol1.JH378218 1231698 1 - 7082604 G i saiBol1.JH378218 C 0 T 193 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T e manLeu1.NW_012103754v1 955801 142 - 2200435 T e panPan2.chr2A 1362179 2801 + 114371477 I a score=6876.000000 s hg38.chr2_KI270774v1_alt 127883 2 + 223625 CA s panTro5.chr2A 1415867 2 + 111504155 CA i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387589 2 + 1464242 CA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110521 2 + 81552678 CA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1443058 2 + 108979918 CA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413028 2 - 111193037 CA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443404 2 + 3644372 CA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397676 2 - 10304083 CA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1474202 2 - 107702431 CA i chlSab2.chr14 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1231699 193 - 7082604 T e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T e manLeu1.NW_012103754v1 955801 142 - 2200435 T e panPan2.chr2A 1362179 2801 + 114371477 I a score=13644.000000 s hg38.chr2_KI270774v1_alt 127885 4 + 223625 GGCT s panTro5.chr2A 1415869 4 + 111504155 GGCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364980 4 + 114371477 GGCT i panPan2.chr2A I 2801 C 0 s gorGor5.CYUI01015607v1 1387591 4 + 1464242 GGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110523 4 + 81552678 GGCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1443060 4 + 108979918 GGCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413030 4 - 111193037 GGCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443406 4 + 3644372 GGCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397678 4 - 10304083 GGCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1474204 4 - 107702431 GGCT i chlSab2.chr14 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1231699 193 - 7082604 T e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T e manLeu1.NW_012103754v1 955801 142 - 2200435 T a score=11000.000000 s hg38.chr2_KI270774v1_alt 127889 2 + 223625 CC s panTro5.chr2A 1415873 2 + 111504155 CC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364984 2 + 114371477 CC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387595 2 + 1464242 CC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110527 2 + 81552678 CC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1443064 2 + 108979918 CC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413034 2 - 111193037 CC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443410 2 + 3644372 CC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397682 2 - 10304083 CC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1474208 2 - 107702431 CC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955659 2 - 2200435 CC i manLeu1.NW_012103754v1 T 142 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1231699 193 - 7082604 T e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T a score=152061.000000 s hg38.chr2_KI270774v1_alt 127891 37 + 223625 TTCTTGTTTGTATGATCCAGTCATTGCTGCAGGAGGT s panTro5.chr2A 1415875 37 + 111504155 TTCTTGTTTGTATGATCCAGTCATTGCTGCAGGAGGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364986 37 + 114371477 TTCTTGTTTGTATGGTGTAGGCAATGCCACAGGAACT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387597 37 + 1464242 TTCTTGTTTGTATGGTGTAGTCAGTGCCGCAGGAGCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110529 37 + 81552678 TTCTTGTTTATATGGTGTAGTCATTGCCACAGGAGGC i nomLeu3.chr19 C 0 I 1992 s rheMac8.chr13 1443066 37 + 108979918 TTCTTGTTTGTATGGTGTAGTCCATGAAGCAGGAACT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413036 37 - 111193037 TTCCTGGTTTTATGGTGTAGTCACTGCCGCAGGAACT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443412 37 + 3644372 TTCTTGTTTGTATGGTGTAGTCCATGAAGCAGGAACT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397684 37 - 10304083 TTCGTGCTTGTATGGTGTAGTCCGTGAAGCAGGAACT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1474210 37 - 107702431 TTCTTGCTTGTATGGTGTAGTCCGTGACGCAGGAACT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955661 37 - 2200435 TTCCTGTTTTTATGGTGTAGTCAGTGCCACAGGAGGC i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1231506 37 - 7082604 TTTTTGTTTGTTTGATGTGGTCAGTGCCGCAGGAGCT i saiBol1.JH378218 T 193 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T a score=20098.000000 s hg38.chr2_KI270774v1_alt 127928 4 + 223625 ACCA s panTro5.chr2A 1415912 4 + 111504155 ACCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365023 4 + 114371477 ACCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1387634 4 + 1464242 ACCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112558 4 + 81552678 ACAA i nomLeu3.chr19 I 1992 C 0 s rheMac8.chr13 1443103 4 + 108979918 ACCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413073 4 - 111193037 ACCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443449 4 + 3644372 ACCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397721 4 - 10304083 ACCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1474247 4 - 107702431 ACCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955698 4 - 2200435 ACTA i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1231543 4 - 7082604 ATCA i saiBol1.JH378218 C 0 I 67 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T a score=100696.000000 s hg38.chr2_KI270774v1_alt 127932 20 + 223625 TGTTGGAAGGGAATGGGGCA s panTro5.chr2A 1415916 20 + 111504155 TGTTGGAAGGGAATGGAGCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365027 20 + 114371477 TGTTGGAAGGGAACTGGGCA i panPan2.chr2A C 0 T 67 s gorGor5.CYUI01015607v1 1387638 20 + 1464242 TGTTGGAAGGGAATGGGGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112562 20 + 81552678 TGTTGTAAGTGAATGGAGCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1443107 20 + 108979918 TGTTGGAAGGGAATGGGGCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413077 20 - 111193037 TGTTGTAAGCGAATGGAGCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443453 20 + 3644372 TGTTGGAAGGGAATGGGGCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397725 20 - 10304083 TGTTGGAAGGGAATGGGGCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1474251 20 - 107702431 TGTTGGAAGGGAATGGGGCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955702 20 - 2200435 CGTTGGAAGGGAATAGGGCA i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1231614 20 - 7082604 TGTTGGAATAGAATGGGACA i saiBol1.JH378218 I 67 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T a score=250150.000000 s hg38.chr2_KI270774v1_alt 127952 54 + 223625 GGCTCCTTCTTGTTTGTATGATCCAGTCATTGCTGCAGGAGGTACCATGTTGGA s panTro5.chr2A 1415936 54 + 111504155 GGCTCCTTCTTGTTTGTATGGTGTAGGCAGTGCCACAGGAACTACCATGTTGGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1364980 54 + 114371477 GGCTCCTTCTTGTTTGTATGGTGTAGGCAATGCCACAGGAACTACCATGTTGGA i panPan2.chr2A T 67 C 0 s gorGor5.CYUI01015607v1 1387658 54 + 1464242 GACTCCTTCTTGTTGGTACGGTGTGGCCAATGCTGCAGGATGTACCATGTTGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112582 54 + 81552678 GGCTTCTTCTTGTTTGTATGGTGTAGTCAATGCCGCAGGAACTACCATGTTGGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1443127 54 + 108979918 GGCTCCTTCGTGCTTGTATGATCTAGTCATTGCTGCAGGAGGTATCATGTTGGA i rheMac8.chr13 C 0 T 2661 s macFas5.chr13 1413097 54 - 111193037 GGCTCCTTCCTGTTTTTATGGTGTAGTCAGTGCCACAGGATGTACCATGTTGTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443473 54 + 3644372 GGCTCCTTCGTGCTTGTATGATCTAGTCATTGCTGCAGGAGGTATCATGTTGGA i macNem1.NW_012011978v1 C 0 T 2460 s cerAty1.NW_012000820v1 1397745 54 - 10304083 GGCTCCTTCGTGCTTGTATGATCTAGTCATTGCTGCAGGAGGTACCATGTTGGA i cerAty1.NW_012000820v1 C 0 T 154 s chlSab2.chr14 1474271 54 - 107702431 GGCTTCTTCTTACTTGTATGATCTAGTCATTGCTGCAGGAGGTACCATGTTGGA i chlSab2.chr14 C 0 T 154 s manLeu1.NW_012103754v1 955722 54 - 2200435 GGGTCCTTCTTGTTTGTATGGTGTAGTCAGTGCCACAGGAGCTACCATGTTGGA i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1231634 54 - 7082604 GGCTCCTTCTTGTTTGCATAATGTGGTCAGTGCTGCAGGAGCTACAGTGTTGGA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T a score=16732.000000 s hg38.chr2_KI270774v1_alt 128006 7 + 223625 AGGGAAT s panTro5.chr2A 1415990 7 + 111504155 AGGGAAC i panTro5.chr2A C 0 T 183 s panPan2.chr2A 1365034 7 + 114371477 AGGGAAC i panPan2.chr2A C 0 I 138 s gorGor5.CYUI01015607v1 1387712 7 + 1464242 AGAGAAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112636 7 + 81552678 AGGGAAT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1413151 7 - 111193037 AGCGAAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441067 7 + 3644372 AGCGAAT i macNem1.NW_012011978v1 T 2460 C 0 s manLeu1.NW_012103754v1 955776 7 - 2200435 AGGGAAT i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1231688 7 - 7082604 AGAAAAT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T e chlSab2.chr14 1474325 154 - 107702431 T e cerAty1.NW_012000820v1 1397799 154 - 10304083 T e rheMac8.chr13 1443181 2661 + 108979918 T a score=7081.000000 s hg38.chr2_KI270774v1_alt 128013 4 + 223625 GGGG s gorGor5.CYUI01015607v1 1387719 4 + 1464242 GGGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112643 4 + 81552678 GGGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1413158 4 - 111193037 GGAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441074 4 + 3644372 GGAG i macNem1.NW_012011978v1 C 0 C 0 s manLeu1.NW_012103754v1 955783 4 - 2200435 GGGG i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1231695 4 - 7082604 GGGG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T e chlSab2.chr14 1474325 154 - 107702431 T e cerAty1.NW_012000820v1 1397799 154 - 10304083 T e rheMac8.chr13 1443181 2661 + 108979918 T e panPan2.chr2A 1365041 138 + 114371477 I e panTro5.chr2A 1415997 183 + 111504155 T a score=2800.000000 s hg38.chr2_KI270774v1_alt 128017 1 + 223625 C s panPan2.chr2A 1365179 1 + 114371477 C i panPan2.chr2A I 138 C 0 s gorGor5.CYUI01015607v1 1387723 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 I 1884 s nomLeu3.chr19 1112647 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1413162 1 - 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441078 1 + 3644372 C i macNem1.NW_012011978v1 C 0 C 0 s manLeu1.NW_012103754v1 955787 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1231699 1 - 7082604 C i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T e chlSab2.chr14 1474325 154 - 107702431 T e cerAty1.NW_012000820v1 1397799 154 - 10304083 T e rheMac8.chr13 1443181 2661 + 108979918 T e panTro5.chr2A 1415997 183 + 111504155 T a score=17400.000000 s hg38.chr2_KI270774v1_alt 128018 9 + 223625 AGGCTCCT---T s panPan2.chr2A 1365180 12 + 114371477 CGGCTCCTTCCT i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1112648 12 + 81552678 AGGCTCCTTCTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440520 12 + 108979918 AGGCTCCTTCCT i rheMac8.chr13 T 2661 C 0 s macFas5.chr13 1413163 12 - 111193037 AGGCTCCTTCCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441079 12 + 3644372 AGGCTTCTTCCT i macNem1.NW_012011978v1 C 0 C 0 s manLeu1.NW_012103754v1 955788 12 - 2200435 AGGTTCCTTCTT i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1231700 9 - 7082604 AGGCTCCTT--- i saiBol1.JH378218 C 0 T 64 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T e chlSab2.chr14 1474325 154 - 107702431 T e cerAty1.NW_012000820v1 1397799 154 - 10304083 T e gorGor5.CYUI01015607v1 1387724 1884 + 1464242 I e panTro5.chr2A 1415997 183 + 111504155 T a score=55560.000000 s hg38.chr2_KI270774v1_alt 128027 23 + 223625 GTTTGTATGATCCAGTCATTGCT s panTro5.chr2A 1415814 23 + 111504155 GTTTGTATGATCCAGTCATTGCT i panTro5.chr2A T 183 C 0 s panPan2.chr2A 1365192 23 + 114371477 GTTTGTATGATCCAGTCATTGCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389608 23 + 1464242 GTTTGTATGATCCAGTCATTGCT i gorGor5.CYUI01015607v1 I 1884 C 0 s nomLeu3.chr19 1112660 23 + 81552678 GTTTGTATGATCTAGTTGTTGCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440532 23 + 108979918 GTTTTTATGGTGTAGTCAGTGCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413175 23 - 111193037 GTTTTTATGGTGTAGTCAGTCCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441091 23 + 3644372 GTTTTTATGGTGTAGTCAGTCCC i macNem1.NW_012011978v1 C 0 C 0 s manLeu1.NW_012103754v1 955800 20 - 2200435 G---GTATGGTGTGGCCAGTGCT i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1231645 23 - 7082604 GTTTGCATAATGTGGTCAGTGCT i saiBol1.JH378218 T 64 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T e chlSab2.chr14 1474325 154 - 107702431 T e cerAty1.NW_012000820v1 1397799 154 - 10304083 T a score=95623.000000 s hg38.chr2_KI270774v1_alt 128050 20 + 223625 GCAGGAGGTACCATGTTGGA s panTro5.chr2A 1415837 20 + 111504155 GCAGGAGGTACCGTGTTGGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365215 20 + 114371477 GCAGGAGGTACCATGTTGGA i panPan2.chr2A C 0 T 194 s gorGor5.CYUI01015607v1 1389631 20 + 1464242 GCAGGAGGTACCATGTTGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112683 20 + 81552678 ACAGGAGGTACCATGTTGGA i nomLeu3.chr19 C 0 T 2183 s rheMac8.chr13 1440555 20 + 108979918 ACAGGATGTACCATGTTGTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413198 20 - 111193037 GCAGGAGGCACTACGTTGGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441114 20 + 3644372 GCAGGAGGCACTACGTTGGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397645 20 - 10304083 GCAGGAACTACCATGTTGGA i cerAty1.NW_012000820v1 T 154 C 0 s chlSab2.chr14 1474171 20 - 107702431 GCAGGAACTACCATGTTGAA i chlSab2.chr14 T 154 C 0 s manLeu1.NW_012103754v1 955820 20 - 2200435 GCAGGACGTACCATGTTGGA i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1231668 20 - 7082604 GCAGGAGCTACAGTGTTGGA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T a score=20760.000000 s hg38.chr2_KI270774v1_alt 128070 6 + 223625 AGGGAA s panTro5.chr2A 1415857 6 + 111504155 AGGGAA i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389651 6 + 1464242 AGGGAA i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1440575 6 + 108979918 AGCGAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413218 6 - 111193037 AGGGAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441134 6 + 3644372 AGGGAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397665 6 - 10304083 AGGGAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1474191 6 - 107702431 AGGGAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955840 6 - 2200435 AGAGAA i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1231688 6 - 7082604 AGAAAA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T e nomLeu3.chr19 1112703 2183 + 81552678 T e panPan2.chr2A 1365235 194 + 114371477 T a score=2818.000000 s hg38.chr2_KI270774v1_alt 128076 1 + 223625 T s panTro5.chr2A 1415863 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365041 1 + 114371477 T i panPan2.chr2A T 194 C 0 s gorGor5.CYUI01015607v1 1389657 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1440581 1 + 108979918 T i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413224 1 - 111193037 C i macFas5.chr13 C 0 T 131 s macNem1.NW_012011978v1 1441140 1 + 3644372 C i macNem1.NW_012011978v1 C 0 I 2262 s cerAty1.NW_012000820v1 1397671 1 - 10304083 T i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1474197 1 - 107702431 T i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955846 1 - 2200435 T i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1231694 1 - 7082604 T i saiBol1.JH378218 C 0 I 1 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T e nomLeu3.chr19 1112703 2183 + 81552678 T a score=7200.000000 s hg38.chr2_KI270774v1_alt 128077 2 + 223625 GG s panTro5.chr2A 1415864 2 + 111504155 GG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365042 2 + 114371477 GG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389658 2 + 1464242 GG i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1440582 2 + 108979918 GG i rheMac8.chr13 C 0 I 2473 s cerAty1.NW_012000820v1 1397672 2 - 10304083 GG i cerAty1.NW_012000820v1 C 0 I 1 s chlSab2.chr14 1474198 2 - 107702431 GG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955847 2 - 2200435 GG i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1231696 2 - 7082604 GG i saiBol1.JH378218 I 1 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T e macNem1.NW_012011978v1 1441141 2262 + 3644372 I e macFas5.chr13 1413225 131 - 111193037 T e nomLeu3.chr19 1112703 2183 + 81552678 T a score=6600.000000 s hg38.chr2_KI270774v1_alt 128079 1 + 223625 G s panTro5.chr2A 1415866 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365044 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389660 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110520 1 + 81552678 G i nomLeu3.chr19 T 2183 C 0 s rheMac8.chr13 1443057 1 + 108979918 G i rheMac8.chr13 I 2473 C 0 s macFas5.chr13 1413094 1 - 111193037 G i macFas5.chr13 T 131 C 0 s macNem1.NW_012011978v1 1443403 1 + 3644372 G i macNem1.NW_012011978v1 I 2262 C 0 s cerAty1.NW_012000820v1 1397675 1 - 10304083 G i cerAty1.NW_012000820v1 I 1 C 0 s chlSab2.chr14 1474200 1 - 107702431 G i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012103754v1 955849 1 - 2200435 G i manLeu1.NW_012103754v1 C 0 T 197 s saiBol1.JH378218 1231698 1 - 7082604 G i saiBol1.JH378218 C 0 T 134 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391612 197 - 13651311 T a score=221699.000000 s hg38.chr2_KI270774v1_alt 128080 45 + 223625 CAGGCTCCTTCTTGTTTGTATGATCCAGTCATTGCTGCAGGAGGT s panTro5.chr2A 1415867 45 + 111504155 CAGGCTCCTTCTTGTTTGTATGATCCAGTCATTGCTGCAGGAGGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365045 45 + 114371477 CAGGCTCCTTCTTATTTGTAAGATCTAGTCATTGCTGCAGGAGGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389661 45 + 1464242 CAGGCTCCTTCCTGCTTGTATGATCCAGTCATTGCTGCAGGAGGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110521 45 + 81552678 CAGGCTCCTTCTTGTTTATATGGTGTAGTCATTGCCACAGGAGGC i nomLeu3.chr19 C 0 I 1992 s rheMac8.chr13 1443058 45 + 108979918 CAGGCTCCTTCTTGTTTGTATGGTGTAGTCCATGAAGCAGGAACT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413095 45 - 111193037 CAGGCTCCTTCCTGTTTTTATGGTGTAGTCAGTGCCACAGGATGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443404 45 + 3644372 CAGGCTCCTTCTTGTTTGTATGGTGTAGTCCATGAAGCAGGAACT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397676 45 - 10304083 CAGGCTCCTTCGTGCTTGTATGGTGTAGTCCGTGAAGCAGGAACT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1474202 45 - 107702431 CAGGCTCCTTCTTGCTTGTATGGTGTAGTCCGTGACGCAGGAACT i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012103754v1 955653 45 - 2200435 CAGGTGCCTTCCTGTTTTTATGGTGTAGTCAGTGCCACAGGAGGC i manLeu1.NW_012103754v1 T 197 C 0 s colAng1.NW_012118821v1 1391415 45 - 13651311 CAAGCTCCTTCTTGTTTGTATGATCTACTCATTACCACAGGAGCT i colAng1.NW_012118821v1 T 197 C 0 s saiBol1.JH378218 1231565 45 - 7082604 CAGGCTCCTTCTTGTTTGTATAGTGTGGTGAGTGCTGCAGAAGGC i saiBol1.JH378218 T 134 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=275015.000000 s hg38.chr2_KI270774v1_alt 128125 49 + 223625 ACCATGTTGGAAGGGAATGGGGCAGGCTCCTTCTTGTTTGTATGATCCA s panTro5.chr2A 1415912 49 + 111504155 ACCATGTTGGAAGGGAATGGAGCCGGCTCCTTCTTGTTTGTATGGTGTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365090 49 + 114371477 ACCATGTTTGAAGGGAATGGGGCAGGCTCCTTCTTGTTTGTATGATCCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389706 49 + 1464242 ACCGTGTTGGAAGGGAATGGAGCCGGCTCCTTCTTGTTTGTATGATCCA i gorGor5.CYUI01015607v1 C 0 T 133 s nomLeu3.chr19 1112558 49 + 81552678 ACAATGTTGTAAGTGAATGGAGCAGGCTTCTTCTTGTTTGTATGGTGTA i nomLeu3.chr19 I 1992 C 0 s rheMac8.chr13 1443103 49 + 108979918 ACCATGTTGGAAGGGAATGGGGCAGGCTCCTTCGTGCTTGTATGATCTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413140 49 - 111193037 ACCATGTTGTAAGCGAATGGAGCAGGCTCCTTCCTGTTTTTATGGTGTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443449 49 + 3644372 ACCATGTTGGAAGGGAATGGGGCAGGCTCCTTCGTGCTTGTATGATCTA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397721 49 - 10304083 ACCATGTTGGAAGGGAATGGGGCAGGCTCCTTCGTGCTTGTATGATCTA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1474247 49 - 107702431 ACCATGTTGGAAGGGAATGGGGCAGGCTTCTTCTTACTTGTATGATCTA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955698 49 - 2200435 ACTACGTTGGAAGGGAATAGGGCAGGGTCCTTCTTGTTTGTATGGTGTA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391460 49 - 13651311 ACCATGTTGTAAGTGAATGGAGCAGGCTCCTTCCTGTTGGTATGGTGTA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231610 49 - 7082604 ACTGTGTTGGAATAGAATGGGACAGGCTCCTTCTTGTTTGCATAATGTG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=168363.000000 s hg38.chr2_KI270774v1_alt 128174 29 + 223625 GTCATTGCTGCAGGAGGTACCATGTTGGA s panTro5.chr2A 1415961 29 + 111504155 GGCAGTGCCACAGGAACTACCATGTTGGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365139 29 + 114371477 GTCATTGTTGCAGGAGGCACCATGTTGGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389622 29 + 1464242 GTCATTGCTGCAGGAGGTACCATGTTGGA i gorGor5.CYUI01015607v1 T 133 C 0 s nomLeu3.chr19 1112607 29 + 81552678 GTCAATGCCGCAGGAACTACCATGTTGGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1443152 29 + 108979918 GTCATTGCTGCAGGAGGTATCATGTTGGA i rheMac8.chr13 C 0 T 2673 s macFas5.chr13 1413189 29 - 111193037 GTCAGTCCCGCAGGAGGCACTACGTTGGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443498 29 + 3644372 GTCATTGCTGCAGGAGGTATCATGTTGGA i macNem1.NW_012011978v1 C 0 T 2460 s cerAty1.NW_012000820v1 1397770 29 - 10304083 GTCATTGCTGCAGGAGGTACCATGTTGGA i cerAty1.NW_012000820v1 C 0 T 2121 s chlSab2.chr14 1474296 29 - 107702431 GTCATTGCTGCAGGAGGTACCATGTTGGA i chlSab2.chr14 C 0 T 2760 s manLeu1.NW_012103754v1 955747 29 - 2200435 GTCAGTGCCACAGGAGCTACCATGTTGGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391509 29 - 13651311 GTCAGTGCCGCAGGAGCTACCATGTTGGA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231659 29 - 7082604 GTCAGTGCTGCAGGAGCTACAGTGTTGGA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=38157.000000 s hg38.chr2_KI270774v1_alt 128203 7 + 223625 AGGGAAT s panTro5.chr2A 1415990 7 + 111504155 AGGGAAC i panTro5.chr2A C 0 I 134 s panPan2.chr2A 1365168 7 + 114371477 AGGGAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389651 7 + 1464242 AGGGAAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112636 7 + 81552678 AGGGAAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440508 7 + 108979918 AGCGAAT i rheMac8.chr13 T 2673 C 0 s macFas5.chr13 1413218 7 - 111193037 AGGGAAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441067 7 + 3644372 AGCGAAT i macNem1.NW_012011978v1 T 2460 C 0 s cerAty1.NW_012000820v1 1395678 7 - 10304083 AGGGAAC i cerAty1.NW_012000820v1 T 2121 C 0 s chlSab2.chr14 1471565 7 - 107702431 AGGGAAC i chlSab2.chr14 T 2760 C 0 s manLeu1.NW_012103754v1 955776 7 - 2200435 AGGGAAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391538 7 - 13651311 AGAGAAC i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231688 7 - 7082604 AGAAAAT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=34549.000000 s hg38.chr2_KI270774v1_alt 128210 5 + 223625 GGGGC s panTro5.chr2A 1416131 5 + 111504155 GGGGC i panTro5.chr2A I 134 C 0 s panPan2.chr2A 1365175 5 + 114371477 GGGGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389658 4 + 1464242 -GGGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112643 5 + 81552678 GGGGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440515 5 + 108979918 GGAGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413225 5 - 111193037 GGGGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441074 5 + 3644372 GGAGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395685 5 - 10304083 GGGGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471572 5 - 107702431 GGGGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955783 5 - 2200435 GGGGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391545 5 - 13651311 GGGGC i colAng1.NW_012118821v1 C 0 T 135 s saiBol1.JH378218 1231695 5 - 7082604 GGGGC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=43892.000000 s hg38.chr2_KI270774v1_alt 128215 9 + 223625 AGGCTCCT---T s panTro5.chr2A 1416136 12 + 111504155 CGGCTCCTTCCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365180 12 + 114371477 CGGCTCCTTCCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389662 12 + 1464242 AGGCTCCTTCCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112648 12 + 81552678 AGGCTCCTTCTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1440520 12 + 108979918 AGGCTCCTTCCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413230 12 - 111193037 AGGTTGCTTCTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441079 12 + 3644372 AGGCTTCTTCCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395690 12 - 10304083 AGGTTCCTTCTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471577 12 - 107702431 AGGTTCCTTCTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955788 12 - 2200435 AGGTTCCTTCTT i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1231700 9 - 7082604 AGGCTCCTT--- i saiBol1.JH378218 C 0 T 64 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391550 135 - 13651311 T a score=168925.000000 s hg38.chr2_KI270774v1_alt 128224 43 + 223625 GTTTGTATGATCCAGTCATTGCTGCAGGAGGTACCATGTTGGA s panTro5.chr2A 1416148 43 + 111504155 GTTTGTATGATCCAGTCATTGCTGCAGGAGGTACCATGTTGGA i panTro5.chr2A C 0 T 194 s panPan2.chr2A 1365192 43 + 114371477 GTTTGTATGATCCAGTCATTGCTGCAGGAGGTACCATGTTGGA i panPan2.chr2A C 0 T 194 s gorGor5.CYUI01015607v1 1389674 43 + 1464242 GCTTGTATGATCCAGTCATTGCTGCAGGAGGTACCGTGTTGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112660 43 + 81552678 GTTTGTATGATCTAGTTGTTGCCACAGGAGGTACCATGTTGGA i nomLeu3.chr19 C 0 T 2183 s rheMac8.chr13 1440532 43 + 108979918 GTTTTTATGGTGTAGTCAGTGCCACAGGATGTACCATGTTGTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413242 40 - 111193037 G---GTATGGTGTGGCCAGTGCTGCAGGACGTACCATGTTGGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441091 43 + 3644372 GTTTTTATGGTGTAGTCAGTCCCGCAGGAGGCACTACGTTGGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395702 40 - 10304083 G---GTATGGTGTGGCCAGTGCTGCAGGACGTACCATGTTGGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471589 40 - 107702431 G---GTATGGTGTGGCCAGAGCTGCAGGATGTACCATGTTGGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955800 40 - 2200435 G---GTATGGTGTGGCCAGTGCTGCAGGACGTACCATGTTGGA i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1231645 43 - 7082604 GTTTGCATAATGTGGTCAGTGCTGCAGGAGCTACAGTGTTGGA i saiBol1.JH378218 T 64 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391550 135 - 13651311 T a score=14804.000000 s hg38.chr2_KI270774v1_alt 128267 6 + 223625 AGGGAA s gorGor5.CYUI01015607v1 1389717 6 + 1464242 AGGGAA i gorGor5.CYUI01015607v1 C 0 I 1 s rheMac8.chr13 1440575 6 + 108979918 AGCGAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413282 6 - 111193037 AGAGAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1441134 6 + 3644372 AGGGAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1395742 6 - 10304083 AGAGAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471629 6 - 107702431 AGAGAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955840 6 - 2200435 AGAGAA i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1231688 6 - 7082604 AGAAAA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391550 135 - 13651311 T e nomLeu3.chr19 1112703 2183 + 81552678 T e panPan2.chr2A 1365235 194 + 114371477 T e panTro5.chr2A 1416191 194 + 111504155 T a score=1846.000000 s hg38.chr2_KI270774v1_alt 128273 1 + 223625 T s panTro5.chr2A 1415997 1 + 111504155 T i panTro5.chr2A T 194 C 0 s panPan2.chr2A 1365041 1 + 114371477 T i panPan2.chr2A T 194 C 0 s gorGor5.CYUI01015607v1 1389724 1 + 1464242 G i gorGor5.CYUI01015607v1 I 1 C 0 s rheMac8.chr13 1440581 1 + 108979918 T i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1413288 1 - 111193037 T i macFas5.chr13 C 0 T 329 s macNem1.NW_012011978v1 1441140 1 + 3644372 C i macNem1.NW_012011978v1 C 0 I 2262 s cerAty1.NW_012000820v1 1395748 1 - 10304083 T i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1471635 1 - 107702431 T i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955846 1 - 2200435 T i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1231694 1 - 7082604 T i saiBol1.JH378218 C 0 I 1 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391550 135 - 13651311 T e nomLeu3.chr19 1112703 2183 + 81552678 T a score=6152.000000 s hg38.chr2_KI270774v1_alt 128274 2 + 223625 GG s panTro5.chr2A 1415998 2 + 111504155 GG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365042 2 + 114371477 GG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389725 2 + 1464242 GA i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1440582 2 + 108979918 GG i rheMac8.chr13 C 0 I 2475 s cerAty1.NW_012000820v1 1395749 2 - 10304083 GG i cerAty1.NW_012000820v1 C 0 I 1857 s chlSab2.chr14 1471636 2 - 107702431 GG i chlSab2.chr14 C 0 I 2496 s manLeu1.NW_012103754v1 955847 2 - 2200435 GG i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1231696 2 - 7082604 GG i saiBol1.JH378218 I 1 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391550 135 - 13651311 T e macNem1.NW_012011978v1 1441141 2262 + 3644372 I e macFas5.chr13 1413289 329 - 111193037 T e nomLeu3.chr19 1112703 2183 + 81552678 T a score=5500.000000 s hg38.chr2_KI270774v1_alt 128276 1 + 223625 G s panTro5.chr2A 1416000 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365044 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389727 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110520 1 + 81552678 G i nomLeu3.chr19 T 2183 C 0 s macFas5.chr13 1412960 1 - 111193037 G i macFas5.chr13 T 329 C 0 s macNem1.NW_012011978v1 1443403 1 + 3644372 G i macNem1.NW_012011978v1 I 2262 C 0 s cerAty1.NW_012000820v1 1397608 1 - 10304083 G i cerAty1.NW_012000820v1 I 1857 C 0 s chlSab2.chr14 1474134 1 - 107702431 G i chlSab2.chr14 I 2496 C 0 s manLeu1.NW_012103754v1 955849 1 - 2200435 G i manLeu1.NW_012103754v1 C 0 T 264 s saiBol1.JH378218 1231698 1 - 7082604 G i saiBol1.JH378218 C 0 T 193 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e colAng1.NW_012118821v1 1391550 135 - 13651311 T e rheMac8.chr13 1440584 2475 + 108979918 I a score=37400.000000 s hg38.chr2_KI270774v1_alt 128277 8 + 223625 CAGGCTCC s panTro5.chr2A 1416001 8 + 111504155 CAGGCTCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365045 8 + 114371477 CAGGCTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389728 8 + 1464242 CCGGCTCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1110521 8 + 81552678 CAGGCTCC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1412961 8 - 111193037 CAGGCTCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443404 8 + 3644372 CAGGCTCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397609 8 - 10304083 CAGGCTCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1474135 8 - 107702431 CAGGCTCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955586 8 - 2200435 CAGGCTGC i manLeu1.NW_012103754v1 T 264 C 0 s colAng1.NW_012118821v1 1391415 8 - 13651311 CAAGCTCC i colAng1.NW_012118821v1 T 135 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1231699 193 - 7082604 T e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e rheMac8.chr13 1440584 2475 + 108979918 I a score=193273.000000 s hg38.chr2_KI270774v1_alt 128285 47 + 223625 TTCTTGTTTGTATGATCCAGTCATTGCTGCAGGAGGTACCATGTTGG s panTro5.chr2A 1416009 47 + 111504155 TTCTTATTTGTAAGATCTAGTCATTGCTGCAGGAGGTACCATGTTTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365053 47 + 114371477 TTCTTATTTGTAAGATCTAGTCATTGCTGCAGGAGGTACCATGTTTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389736 47 + 1464242 TTCTTGTTTGTATGATCCAGTCATTGCTGCAGGAGGTACCATGTTGG i gorGor5.CYUI01015607v1 C 0 T 67 s nomLeu3.chr19 1110529 47 + 81552678 TTCTTGTTTATATGGTGTAGTCATTGCCACAGGAGGCACTATGTTGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1412969 47 - 111193037 TTCCTGTTTTTATGGTGTAGTCAGTGCCACAGGATGTACCATGTTGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443412 47 + 3644372 TTCTTGTTTGTATGGTGTAGTCCATGAAGCAGGAACTACCATGTTGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397617 47 - 10304083 TTCTTGCTTGTATGGTGTAGTCCGTGAAGCAGGAACTACCATGTTGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1474143 47 - 107702431 TTCTTGTTTGTATGGTGTAGTCCATGAAGCAGGAACTACCATGTTGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955594 47 - 2200435 TTCTTGTTTTTGTGGTGTAGTCAGTGCCGCAGGAGGCACTATGTTGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391423 47 - 13651311 TTCTTGTTTGTATGATCTACTCATTACCACAGGAGCTACCATGTTGT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1231506 47 - 7082604 TTTTTGTTTGTTTGATGTGGTCAGTGCCGCAGGAGCTATCATGTTGG i saiBol1.JH378218 T 193 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e rheMac8.chr13 1440584 2475 + 108979918 I a score=68563.000000 s hg38.chr2_KI270774v1_alt 128332 13 + 223625 AAGGGAATGGGGT s panTro5.chr2A 1416056 13 + 111504155 AAGGGAATGGGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365100 13 + 114371477 AAGGGAATGGGGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389716 13 + 1464242 AAGGGAATGGAGC i gorGor5.CYUI01015607v1 T 67 C 0 s nomLeu3.chr19 1110576 13 + 81552678 AAGGGAATAGGGC i nomLeu3.chr19 C 0 I 1992 s macFas5.chr13 1413016 13 - 111193037 AAGCGAATGGAGC i macFas5.chr13 C 0 I 2464 s macNem1.NW_012011978v1 1443459 13 + 3644372 AAGGGAATGGGGC i macNem1.NW_012011978v1 C 0 T 67 s cerAty1.NW_012000820v1 1397664 13 - 10304083 AAGGGAATGGGGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1474190 13 - 107702431 AAGGGAATGGGGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955641 13 - 2200435 AAGGGAATGGAGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391470 13 - 13651311 AAGTGAATGGAGC i colAng1.NW_012118821v1 C 0 I 67 s saiBol1.JH378218 1231553 13 - 7082604 AAGAAAATGGGGC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e rheMac8.chr13 1440584 2475 + 108979918 I a score=286649.000000 s hg38.chr2_KI270774v1_alt 128345 54 + 223625 AGGCTCCTTCCTGTTTGTATGATCCAGTCACTGCTGCAGGAGGCACCATGTTGG s panTro5.chr2A 1416069 54 + 111504155 AGGCTCCTTCTTGTTTGTATGATCCAGTCATTGTTGCAGGAGGCACCATGTTGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365113 54 + 114371477 AGGCTCCTTCTTGTTTGTATGATCCAGTCATTGTTGCAGGAGGCACCATGTTGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389729 54 + 1464242 CGGCTCCTTCTTGTTTGTATGATCCAGTCATTGCTGCAGGAGGTACCATGTTGG i gorGor5.CYUI01015607v1 C 0 T 133 s nomLeu3.chr19 1112581 54 + 81552678 AGGCTTCTTCTTGTTTGTATGGTGTAGTCAATGCCGCAGGAACTACCATGTTGG i nomLeu3.chr19 I 1992 C 0 s rheMac8.chr13 1443059 54 + 108979918 AGGCTCCTTCTTGTTTGTATGGTGTAGTCCATGAAGCAGGAACTACCATGTTGG i rheMac8.chr13 I 2475 C 0 s macFas5.chr13 1415493 54 - 111193037 AGGCTCCTTCTTGTTTGTATGGTGTAGTCCATGAAGCAGGAACTACCATGTTGG i macFas5.chr13 I 2464 C 0 s macNem1.NW_012011978v1 1443405 54 + 3644372 AGGCTCCTTCTTGTTTGTATGGTGTAGTCCATGAAGCAGGAACTACCATGTTGG i macNem1.NW_012011978v1 T 67 C 0 s cerAty1.NW_012000820v1 1397677 54 - 10304083 AGGCTCCTTCGTGCTTGTATGGTGTAGTCCGTGAAGCAGGAACTACCATGTTGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1474203 54 - 107702431 AGGCTCCTTCTTGCTTGTATGGTGTAGTCCGTGACGCAGGAACTACCATGTTGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955654 54 - 2200435 AGGTGCCTTCCTGTTTTTATGGTGTAGTCAGTGCCACAGGAGGCACTACGTTGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391550 54 - 13651311 AGGTTCCTTCTTGTTGGTATGGTGTAGTCAGTGCCGCAGGAGGCACTACGTTGG i colAng1.NW_012118821v1 I 67 C 0 s saiBol1.JH378218 1231566 54 - 7082604 AGGCTCCTTCTTGTTTGTATAGTGTGGTGAGTGCTGCAGAAGGCACTGTGTTGG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=223113.000000 s hg38.chr2_KI270774v1_alt 128399 39 + 223625 AAGGGAATGGGGCAGGCTCCTTCCTGTTTGTATGATCCC s panTro5.chr2A 1416123 39 + 111504155 AAGGGAATGGGGCCGGCTCCTTCCTGTTTGTATGATCCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365167 39 + 114371477 AAGGGAATGGGGCCGGCTCCTTCCTGTTTGTATGATCCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389650 38 + 1464242 AAGGGAAT-GGGCAGGCTCCTTCCTGCTTGTATGATCCA i gorGor5.CYUI01015607v1 T 133 I 67 s nomLeu3.chr19 1112635 39 + 81552678 AAGGGAATGGGGCAGGCTCCTTCTTGTTTGTATGATCTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1443113 39 + 108979918 AAGGGAATGGGGCAGGCTCCTTCGTGCTTGTATGATCTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1415547 39 - 111193037 AAGGGAATGGGGCAGGCTCCTTCGTGCTTGTATGATCTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443459 39 + 3644372 AAGGGAATGGGGCAGGCTCCTTCGTGCTTGTATGATCTA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397731 39 - 10304083 AAGGGAATGGGGCAGGCTCCTTCGTGCTTGTATGATCTA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1474257 39 - 107702431 AAGGGAATGGGGCAGGCTTCTTCTTACTTGTATGATCTA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955708 39 - 2200435 AAGGGAATAGGGCAGGGTCCTTCTTGTTTGTATGGTGTA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1391604 39 - 13651311 AAGGGAATAGGGCAGGGTCCTTCTTGTTGGTATGGTGTG i colAng1.NW_012118821v1 C 0 I 3136 s saiBol1.JH378218 1231620 39 - 7082604 AATAGAATGGGACAGGCTCCTTCTTGTTTGCATAATGTG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=186190.000000 s hg38.chr2_KI270774v1_alt 128438 29 + 223625 GTCATTGCTGCAGGAGGTACCATGTTGGA s panTro5.chr2A 1416162 29 + 111504155 GTCATTGCTGCAGGAGGTACCATGTTGGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365206 29 + 114371477 GTCATTGCTGCAGGAGGTACCATGTTGGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389755 29 + 1464242 GTCATTGCTGCAGGAGGTACCATGTTGGT i gorGor5.CYUI01015607v1 I 67 C 0 s nomLeu3.chr19 1112674 29 + 81552678 GTTGTTGCCACAGGAGGTACCATGTTGGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1443152 29 + 108979918 GTCATTGCTGCAGGAGGTATCATGTTGGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1415586 29 - 111193037 GTCATTGCTGCAGGAGGTATCATGTTGGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443498 29 + 3644372 GTCATTGCTGCAGGAGGTATCATGTTGGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397770 29 - 10304083 GTCATTGCTGCAGGAGGTACCATGTTGGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1474296 29 - 107702431 GTCATTGCTGCAGGAGGTACCATGTTGGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 955747 29 - 2200435 GTCAGTGCCACAGGAGCTACCATGTTGGA i manLeu1.NW_012103754v1 C 0 I 2685 s colAng1.NW_012118821v1 1394779 29 - 13651311 GTCATTGCTGTAGGAGGTACCATGTTGGA i colAng1.NW_012118821v1 I 3136 C 0 s saiBol1.JH378218 1231659 29 - 7082604 GTCAGTGCTGCAGGAGCTACAGTGTTGGA i saiBol1.JH378218 C 0 I 1850 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I a score=76275.000000 s hg38.chr2_KI270774v1_alt 128467 18 + 223625 TATGGTACCATGTTGGAT s panTro5.chr2A 1416191 18 + 111504155 TATGGTACCATGTTGGAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365235 18 + 114371477 TATGGTACCATGTTGGAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389784 18 + 1464242 TATGGTACCATGTTGGAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112703 18 + 81552678 GATGGTACCATGTTGGAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1443181 18 + 108979918 TGAAGTACCATGTTGGAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1415615 18 - 111193037 TGAAGTACCATGTTGGAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443527 18 + 3644372 TGAAGTACCATGTTGGAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397799 18 - 10304083 TGAAGTACCATGCTGGAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1474325 18 - 107702431 TGAAGTACCATGTTGGAT i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1394808 18 - 13651311 TGAAGTACCATGTTGGAT i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 116775 73 + 287728 I e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1231688 1850 - 7082604 I e cebCap1.NW_016107827v1 1322061 1 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e calJac3.chr14 1388668 113 - 108792865 I e manLeu1.NW_012103754v1 955776 2685 - 2200435 I a score=8281.000000 s hg38.chr2_KI270774v1_alt 128485 1 + 223625 A s panTro5.chr2A 1416209 1 + 111504155 A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365253 1 + 114371477 A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389802 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112721 1 + 81552678 A i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1443199 1 + 108979918 A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1415633 1 - 111193037 A i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443545 1 + 3644372 A i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397817 1 - 10304083 A i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1474343 1 - 107702431 A i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1394826 1 - 13651311 A i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1388781 1 - 108792865 A i calJac3.chr14 I 113 C 0 s cebCap1.NW_016107827v1 1322062 1 + 1864846 A i cebCap1.NW_016107827v1 I 1 C 0 s aotNan1.NW_018513311v1 116848 1 + 287728 A i aotNan1.NW_018513311v1 I 73 C 0 e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1231688 1850 - 7082604 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e manLeu1.NW_012103754v1 955776 2685 - 2200435 I a score=3690959.000000 s hg38.chr2_KI270774v1_alt 128486 491 + 223625 AGTGGCACAGTGGATAGAATCCAT---CGCCATAGTGACCATGAGTGGATTCCTGCTATTAAATTGGGGTACGACTTATGCAGGGCTTGGGGGTGAATCTGGAGGCACAGGTGGCCGAGTCTTCCATGGGCCTGCACCCCCAGATGAGAAGCCcccaggtgcagatcgagaactgtacaccccagagggctgccttctggcccctcctaggttttgacatctccccagaggtgaccattgctttgatcttcatcaccatagttagttttccctgacctggcttttataggaaggaagttagatggtaacccctgggcctggcttctCCACCTCCA----------GGATTTATTTGCTCCTGCCTTGCTGAGGGAGACACTCTTCGTTACAGGGCAGGCA---TGGGCGCCTCTCTGCTGAGC-----------------------------ACTGGTCAATGCttccaagtggctgctccaatctgcattcccaggagcaaagtgtaagagccccacagccctcaccaatccccg s panTro5.chr2A 1416210 491 + 111504155 AGTGGCACAGTGGATAGAATCCAT---CGCCATAGTGACCATGAGTGGATTCCTGCTATTAAATTGGGGTACGACTTATGCAGGGCTTGGGGGTGAATCTGGAGGCACAGGTGGCCGAGTCTCCCATGGGCCTGCACCCCCGGATGAGAAGCCcccaggtgcagatcgagaactgtacaccccagagggctgccttctggcccctcctaggttttgatgtctcctcagaggtgaccattgctttgatcttcatcaccatagttagttttccctgacctggcttttataggaaggaagttagatggtaacccctgggcctggcttctCCACCTCCA----------GGATTTATTTGCTCCTGCCTTGCTGAGGGAGACACTCATCGTTACAGGGCAGGCA---TGGGCACCTCTCTGCTGAGC-----------------------------ACTGGTCAATGCttccaagtggctgctccaatctgcattcccaggagcaaagtgtaagagccccacagccctcaccaatccctg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365254 491 + 114371477 AGTGGCACAGTGGATAGAATCCAT---CGCCATAGTGACCATGAGTGGATTCCTGCTATTAAATTGGGGTACGACTTATGCAGGGCTTGGGGGTGAATCTGGAGGCACAGGTGGCCGAGTCTCCCATGGGCCTGCACCCCCAGATGAGAAGCCcccaggtgcagatcgagaactgtacaccccagagggctgccttctggcccctcctaggttttgatgtctcctcagaggtgaccattgctttgatcttcatcaccatagttagttttccctgacctggcttttataggaaggaagttagatggtaacccctgggcctggcttctCCACCTCCA----------GGATTTATTTGCTCCTGCCTTGCTGAGGGAGACACTCATCGTTACAGGGCAGGCA---TGGGCGCCTCTCTGCTGAGC-----------------------------ACTGGTCAATGCttccaagtggctgctccaatctgcattcccaggagcaaagtgtaagagccccacagccctcaccaatccccg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1389803 489 + 1464242 AGTGGCACAGTGGATAGAATCCAT---CGCCATAGTGACCATGAGTGGATTCCTGCTATTAAATTGGAGTACGACTTACGCAGGGCTTGGGGGTGAATCTGGAGGCACAGGTGGCCAAGTCTCCCAT-GGCCTGCACCCCCAGATGAGGAGCCcccagatgcagattgaagactttacaccccagagggctgccttctgg-ccctcccaggttttgacgtctccccagaggtgatcattgctttgatcttcatcaccatagttagttttccctgacctggcttttataggaaggaagttagatggtaacccctgggcctggcttctCCACCTCCA----------GGATTTAGTTGCTCCTGCCTTGCTGAGGGAGACACTCATCGTTACAGGGCAGGCA---TGGGAGCCTCTCTGCTGAGC-----------------------------ACTGGTCAATGCTGCCaagtggctgctccaatctgcattcccaggagcaaagtgtaagagccccacagccctcaccaatccccg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1112722 487 + 81552678 AGTGGCACAGTGGATAGAACCCAT---CACGATAGTGACCATGTGTGGATTCCTGCCATTAAGTTGGAATACGACTTATGCAGGACTTGGGGGTGAATCTGGAGGCACAGGTGGCCGAGTCTCCCATGGGCCTacacccccagatgaggggcccccagatgcagattgaggactttacaccccagagggctgccttctggcccctcccagattttgatgtctccccagaggtgaccgttgctttgatcttcatcaccatagttagttttccctgACCCGGCTTTTAT----AGAAAGTTAGATGGTAACCCCTGAGCCTGGCTTCTCTGCCTCCA----------GGATTTAGTTGCTCCTGCCTTGCTGAGGGAGTCACTCATTGTTACAGGGCAGGCA---TGGGCGCCTCTCTGCTCAGC-----------------------------GCTGGTCAATGCTGCTGaggggctgctccaatctgcattcccaggagcaaagtgtaagagccccagcgcccccaccagtccctg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1443200 495 + 108979918 AGTGGCACAGTGGATAGAATCCAT---CTCCATTGTGACCATGAGTGGATTTCTGCTATTAAATTGGAGTACGACTTATGCAGGGCTTGGGGGTGAATCTGGAGGCACAGGTGGCCAAGTCTCCCATGGGCCTGCACCCCCAGATGAGGGGCCcccagatgcagatcaaggactttacaccccagagggctgccttctggcccctcccagattgtgctgtctccccagaggtgaccactgttttgatcttcgtcaccatagtcagttttccctgacctggcttttataggaaggaagttagatggtaacccctgggcctggcttctCCACCTCCACTCACCTTGGAGATGTAGTTGCTCCTGCCTTGTGGAGGGAGACACTCATCGTTACAGGACAGGCAGGGTGAG--------TGCTGAGC-----------------------------GCTGGTcaatgctcccgagtggctgctctaatctgcactcccaggagcaaagtgtaagggccccac-gccctccccaatccccg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1415634 495 - 111193037 AGTGGCACAGTGGATAGAATCCAT---CTCCATTGTGACCATGAGTGGATTTCTGCTATTAAATTGGAGTACGACTTATGCAGGGCTTGGGGGTGAATCTGGAGGCACAGGTGGCCAAGTCTCCCATGGGCCTGCACCCCCAGATGAGGGGCCcccagatgcagatcaaggactttacaccccagagggctgccttctggcccctcccagattgtgctgtctccccagaggtgaccactgttttgatcttcgtcaccatagtcagttttccctgacctggcttttataggaaggaagttagatggtaacccctgggcctggcttctCCACCTCCACTCACCTTGGAGATGTAGTTGCTCCTGCCTTGCGGAGGGAGACACTCATCGTTACAGGACAGGCAGGGTGAG--------TGCTGAGC-----------------------------GCTGGTcaatgctcccgagtggctgctctaatctgcactcccaggagcaaagtgtaagggccccac-gccctccccaatccccg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1443546 495 + 3644372 AGTGGCACAGTGGATAGAATCCAT---CTCCATTGTGACCATGAGTGGATTTCTGCTATTAAATTGGAGTACGACTTATGCAGGGCTTGGGGGTGAATCTGGAGGCACAGGTGGCCAAGTCTCCCATGGGCCTGCACCCCCAGATGAGGGGCCcccagatgcagatcaaggactttacaccccagagggctgccttctggcccctcgcagattgtgctgtctccccagacgtgaccactgttttgatcttcgtcaccatagtcagttttccctgacctggcttttataggaaggaagttagatggtaacccctgggcctggcttctCCACCTCCACTCACCTTGGAGATGTAGTTGCTCCTGCCTTGCGGAGGGAGACACTCATCGTTACAGGACAGGCAGGGTGAG--------TGCTGAGC-----------------------------GCTGGTcaatgctccccagtggctgctctaatctgcactcccaggagcaaagtgtaagggccccac-gccctccccaatccccg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1397818 495 - 10304083 AGTGGCACAGTGGATAGAATCCAT---CTCCATTGTGACCATGAGTGGATTTCTGCTATTAAATTGGAGTACGACTTATGCAGGGCTTGGGGGTGAATCTGGAGGCACAGGTGGCCAAGTCTCCCATGGGCCTGCACCCCCAGATGAGGGGCCcccagatgcagatcaaggactttacaccccagagggctgccttctggcccctcccagattgtgctgtctccccagaggtgaccactgttttgatcttcgtcaccatagtcagttttccctgacctggcttttatgggaaggaagttagatggtaacccctgggcctggcttctCCACCTCCACTCACCTTGGAGATGTAGTTGCTCCTGCCTTGCGGAGGGAGCCACTCATCGTTACAGGACAGGCAGGGTGAG--------TGCTGAGT-----------------------------GCTGGTcagtgctcccgagtggctgctccaatctgcactcccaagagcaaagtgtaaggtcccacc-gccctcaccaatccccg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1474344 493 - 107702431 AGTGGCACAGTGGATAGAATCCAT---CTCCATTGTGACCATGAGTGGATTTCTGCTATTAAATTGGAGTACAACTTATTTAGGGCTTGGGGGTGAATCTGGAGGCACAGGTGGCCAAGTCTCCCATGGGCCTGCACCCCCAGATGAGGGGCCcccagatgcagatcaaggactttacaccccagagggctgccttctggcccctcccagattttgctgtctccccagaggtgaccactgttttgatcttcatcaccatagtcagttttccctgacctggcttttataggaaggaagtcagatggtaacccctgggcctggcttctCCACCTCCACTCACCTTGGAGATGTAGTTGCTCCTGCCTTGCGGAGGGAGACACTCATCATTACAGGGCAGGCA---TGGG--------TACTGAGT-----------------------------GCTGGTCAATGCTCCCAAGTGGTTGCTCCAATCTGCACTCCCAGGAGCAAAGTGTAAGGGCCCCACTGccctccccagtccccg i chlSab2.chr14 C 0 I 166 s colAng1.NW_012118821v1 1394827 500 - 13651311 AGTGGCACAGTGGATAGAATCCAT---CTCCATTGTGACCATGAGTAGATTCCTGCTATTAAATTGGAGTATGACTTATGCAGGGCTTGGGGGTGAATCTGGAGGCACAGGTGGCCAAGTCTCCCATGGGCCTGCGGCCCCAGATGAGGGGCCcccagatacagatcagggactttgcaccccagagggctgccttctggcccctcccagattttgctgtctccccagaggtgaccactgttttgatcttcatcgccatagtcagttttccctgacctggcttttataggaaggaagttagatggtaacccctgggcctggcttctCCACCTCCACTCACCTTGGAGATGTAGTTGCTCCTGCCTTGCTGAGGGAGATACTCATCATTACAGGGCAGGTG---TGGGTACCTCTCTGCTGAGt-----------------------------gccggtcaatgctcccaagtggctgctccaatctgcactcccaggagcaaagtgtaagagtcccac-gccctccccaatccccg i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1388782 470 - 108792865 AGTGGCACA-TGGATAGAATCTATCGCCGCCATAGTGGCTGTGAGTGGATTCCTACTGCTAAATTGGGATACAACTTACTCAGGGC-TGGGTGTGAATCTGGAGGCACAGGTAGCCGAGTCTCCCAAGGGCCTGcacccccagatg---------------cagatggaggactttacaccccaga-ggctgctttctggcccctcccagcttttgaggcctccccagaggtgaccactgttttgatcttcatcaccatagctggtttttcctgAGCTGGCTTTTCCAGGAAGGAAATTAAATTGTAATTACTGGGCGTGGCTTCCCCACCTCCACTCACCATGGGACTTTAGTTGCTCCTGGCTTGCTGAGGTAG------------ATGGGGGAGGCA---TGGGCAC--CTCTGCTCAGC-----------------------------ACTGATCAGAGCTGCC-agtggctgctccaatctgcattcccaggaacaaagtgtaagagccccacagccctcaccaatacct- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1233538 496 - 7082604 AGTGGCACAGTGAATAGAACCCATCGCCGCCATAGTGGCTGTGAAGGGTTTCCTACGGTTAAATTGGGGCACAACTTACTCAGGGC-TGGGGGCGAATCTGCAGGCACAGGTAGCCGAGTCTCCCAAGGGCCTGCACCCCCAGTTG---------------TGGATGGAGGACTTGAcaccccaga-ggctgccttctggccccttccagattttgaggcctccccagaggtgaccactgttttgatcttcatccccgtagctggtgtttcctgAGCTGGCTTTTCTAGGAAGGAAGTTAGA----AATTACTGGGCCTGGCTTCTCCACCTCCACTCACCGTGGGACTTCAGTTGCTCCTGGCTTGCTGAGGTAG------------ACCACGGAGGCA---TGGGCGCCTCTCTGCTGAGCACTGACCGGGGAGGCACGGGCGCCTCTCTGCTGACCA---CTGTCGagtggctgctccaacccgagttcccaggagcaaagcgtaagagccccacag-tctctccagtccctg i saiBol1.JH378218 I 1850 C 0 s cebCap1.NW_016107827v1 1322063 473 + 1864846 AGTGGCGCAGTGGATAGAACCCATCGCCGCCATAGTGGCTGTGGGTGGATTCCTACTGTTCAATTGGGGTACAGCTTACTCAGGGC-CGGGGGCGAATCTGGAGGCACAGGTAGCCGAGTCTCCCAAGGGCCTGcacccccagatg---------------cggatggaggactttacaccccaga-ggctgccttctggcccctcccagattttgaggcctccccagaggtgaccactgttttgatcttcatcaccatagctggtgtttcctgagctggcttttctaggaaggaagttagatagtaattactgggcctggcttctCCACCTCCACTCACCGT-GGACGTTAGTTGCTCCTGGCTTGCTGAGGTAG------------ACAGGGGAGGCA---TGGGCGCCTCTCTGCTGAGC-----------------------------ACTGGTCAGTGCTGCC-agtggctgctccaatccacattcccaggagcaaagggtaagagccccacagccctcaccaatccctg i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 116849 465 + 287728 AGTGGCACAGTGGATAGAATCCATCGCCGCCATAGTGGCTGTGAATAGACTGCTACTGTTAAATTGGGGTACAACTTACTCAGGGC-TGGGGGTGAATCCGGAGGCACAGGTAGCCGAGTCTCCTAAGGGcctgaacccccatatg---------------cggatggaggactttacaccccaga-ggctgccttccggcccctcccagattttgaggcctccccagaggtgaccactgttttgatcttcatcaccatagctggtttttcctgagccggcttttctaggaaggaagttagatagtaattactgggcctggcttctCCACCTCCACTCACCGTGGGACTTTAGTTGCTCCTGGCTTGCTGAGGTAG------------ACAGGGGAGGCA---TGGGCGCCTCTCTGCTGAGC-----------------------------ACTGGTC----------agtggctgctcccatctgcattcccaggagcaaagtgtaagagccccacagccctcaccaatccctg i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e manLeu1.NW_012103754v1 955776 2685 - 2200435 I a score=2997.000000 s hg38.chr2_KI270774v1_alt 128977 1 + 223625 t s panTro5.chr2A 1416701 1 + 111504155 t i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365745 1 + 114371477 t i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1390292 1 + 1464242 t i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1113209 1 + 81552678 t i nomLeu3.chr19 C 0 C 0 s colAng1.NW_012118821v1 1395327 1 - 13651311 c i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1389252 1 - 108792865 t i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1234034 1 - 7082604 t i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1322536 1 + 1864846 t i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 117314 1 + 287728 t i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e manLeu1.NW_012103754v1 955776 2685 - 2200435 I e chlSab2.chr14 1474837 166 - 107702431 I e cerAty1.NW_012000820v1 1398313 0 - 10304083 C e macNem1.NW_012011978v1 1444041 0 + 3644372 C e macFas5.chr13 1416129 0 - 111193037 C e rheMac8.chr13 1443695 0 + 108979918 C a score=319292.000000 s hg38.chr2_KI270774v1_alt 128978 43 + 223625 cactgtgatccctttcattt-tggcccttctt----gaggggagggtg s panTro5.chr2A 1416702 43 + 111504155 cactgtgatccctttcattt-tggcccttgtt----gaggggagggtg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365746 43 + 114371477 cactgtgatccctttcattt-tggcccttgtt----gaggggagggtg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1390293 43 + 1464242 cactgtgagcccgttcattt-tagcccttctt----gaggggagggtg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1113210 43 + 81552678 cactgtgagccctttcattt-tagcccttctt----gaggggagggtg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1443695 43 + 108979918 cactgcgagccctttcattt-tagcccttctt----gaggggagggtg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1416129 43 - 111193037 cactgcgagccctttcattt-tagcccttctt----gaggggagggtg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1444041 43 + 3644372 cactgcgagccctttcattt-tagcccttctt----gaggggagggtg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1398313 42 - 10304083 ccctgcgagccctttcattt-tagcccttctt----gaggggagggt- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1475003 43 - 107702431 cactgcgagccctttcattt-tagcccttctt----gaggggagggtg i chlSab2.chr14 I 166 C 0 s colAng1.NW_012118821v1 1395328 47 - 13651311 cactgcaagccctttcattt-tatcccttcgttgggggggggggggtg i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1389253 44 - 108792865 cactgtaagccctttcatttagagtccttctt----gaggggaaggtg i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1234035 42 - 7082604 cactgtgagccctttcattt--agcccttctt----gaggagaaggtg i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1322537 34 + 1864846 cactgtgagccctttcattt--aa------------gaggggaaggtg i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 117315 42 + 287728 cactgtgagccctttcattt--agcccttctt----gaggggaaggtg i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I e manLeu1.NW_012103754v1 955776 2685 - 2200435 I a score=4393847.000000 s hg38.chr2_KI270774v1_alt 129021 500 + 223625 gcatttcctgtgg-------tttaacttcacattttcctggtgactaa-ttgtcttgagcacttttaaaatacattcattggccatttggagac-tctttttcgggatgtgccagttcaaacatttttcccatttttta-atgaatcttttttgatttatagatgc------tcatattttctaaatatgtctt-cagtgagaaatatgttttacaaatgtcttctcccagctgagattggccttttcactctccatgctgtcttttgaagaaacgttgttcatatttttaatgaagtcccctttatcaattacttatttcatggaaagaaaac-tttttt-gttatgtttaagaatcttgctttctctgaagaatgtgaaggtatttttcttgtgttttctgctg-aaaatgttattgttttacatgtcacatttagatctgtgacccatctcattttatgttttctgcaacatatgaggtggCAACCA------------TGAGGG-------------------------------------gtgtgtgtgtgtgtat--gt--gtgtgt s panTro5.chr2A 1416745 503 + 111504155 gcatttcctgtgg-------tttaacttcacattttcttggtgactaa-ttgtcttgagcccttttaaaatacattcattgaccatttggagac-tctttttggggatgtgccagttcaaacatttttcccatttttta-atgaatcttttttgatttatagatgc------tcatattttctaaatatgtctt-cagtgagaaatatgttttacaaatgtcttctcccagctgagattggccttttcactctccatgctgtcttttgaagaaacgttgttcatatttttaatgaagtcccatttatcaattacttatttcatggaaagaaaac-tttttttgttatgtttaagaatcttgctttctctgaaggatgtgaaggtatttttcttgtgttttctgctg-aaaatgttattgttttacatgtcacatttagatctgtgacccatctCATTTAATGTTTTCTGCAACCTATGCGGTGGCAACCA------------TGAGGG-------------------------------------gtgtgtgtgtgtctgg--gtttgtgtgt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1365789 503 + 114371477 gcatttcctgtgg-------tttaacttcacattttcttggtgactaa-ttgtcttgagcccttttaaaatacattcattgaccatttggagac-tctttttggggatgtgccagttcaaacatttttcccatttttta-atgaatcttttttgatttatagatgc------tcatattttctaaatatgtctt-cagtgagaaatatgttttacaaatgtcttctcccagctgagattggccttttcactctccatgctgtcttttgaagaaacgttgttcatatttttaatgaagtcccatttatcaattacttatttcatggaaagaaaac-tttttttgttatgtttaagaatcttgctttctctgaaggatgtgaaggtatttttcttgtgttttctgctg-aaaatgttattgttttacatgtcacatttagatctgtgacccatctCATTTAATGTTTTCTGCAACCTATGCGGTGGCAACCA------------TGAGGG-------------------------------------gtgtgtgtgtgtctgg--gtttgtgtgt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1390336 524 + 1464242 gcatttcctgtgg-------tttaacttcacattttcctggtgactaa-ttgtcttgagcatttttaaaatacattcattggccatttggagac-tctttttggggatgtgccagttcaaacatttttcccatttttta-atgaatcttttttgatttatagatgc------tcatattttctaa--atgtctt-cagtgagaaatatgttttacaaatgtcttctcccagctgagattgaccttttcactctccatgctgtcttttgaagaaacgttgttcatatttttaatgaagtcccatttatcaattacttatttcatggaaagaaaac-tttttttgttatgtttaagaatcttgctttctctgaaggatgcgaaggtattttacttgtgttttctgctg-aaaatgttattgttttacatgtcacatttagatctgtgacccatctcatttaatgttttctgcaacatatgaggCGGCAACCA------------TGAGGgtgtgtgtgtgtgtgtgtgtg--------------tgtgtgtgtgtgtgtctgg--gtgtgtgtgt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1113253 494 + 81552678 g-----------------------------cattctcctggtgactaatttatcttgaacacttttaaaatacattcattggccatttggagac-tctttttggggatgtgccagttcaaacatttttcccatttttta-atgagtcttttttgatttatagacgc------tcatattttctaaatatgtctt-caatgagaaatatgttttacaaatgtcttctcccagctgagactggccttttcactctccatgctgtcttttgaagaaatgttgttcatatttttaatgaagtcccatttatcaattacttatttcatggaaagaaaac-tttttttgttgtgtttaagaatcttgctttctctgaaggatgtgaaggtatttttcttgtgttttctgctg-aaaacgttattgttttacatgtcacatttagatctgtgacccatctcatttaatgttttctgcaacatatgaggtggCAACCA------------TGgtgt---------gcgtgtgtgtg--------------tgtgtgtgtgtgtgtCTGG--GT--ATGTAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1443738 524 + 108979918 gcatttcctgtgg--------ttaactttatattttcctggtgactaa----------gcacttttaaaacacattcattggccatttggagac-tttttggggggatgtgccagttcaaacatttttgcca-tttttg-atgagtcttttttgatttatagacgc------tcgtattttctaaatatgtctt-cagtgagaa--acgttttacaaatgtcttctcccacccgagattggccttttcactctccatgctgtcttttggagaaaagttgttcatatttttaatgaagtcccatttatcaattacttatttcgtggaaagaaaac-tttttttgttgtgtttaagaatcttggtttctctgaaggatgtgaaggtatttttcttgtgttttctgctg-aaaatgttattgttttacatgtcacatttagatctgtgacccatctcatttaatgttttgtgcaatatatgaggtggCAACCA------------TGgtgt---gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtctgtgtctgtgtctgg--gtgtgtgtgt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1416172 524 - 111193037 gcatttcctgtgg--------ttaactttatattttcctggtgactaa----------gcacttttaaaacatattcattggccatttggagac-tttttggggggatgtgccagttcaaacatttttgcca-tttttg-atgagtcttttttgatttatagacgc------tcgtattttctaaatatgtctt-cagtgagaa--acgttttacaaatgtcttctcccacccgagattggccttttcactctccatgctgtcttttggagaaaagttgttcatatttttaatgaagtcccatttatcaattacttatttcgtggaaagaaaac-tttttttgttgtgtttaagaatcttggtttctctgaaggatgtgaaggtatttttcttgtgttttctgctg-aaaatgttattgttttacatgtcacatttagatctgtgacccatctcatttaatgttttgtgcaatatatgaggtggCAACCA------------TGgtgt---gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtctgtgtctgtgtctgg--gtgtgtgtgt i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1444084 520 + 3644372 gcatttcctgtgg--------ttaactttatattttcctggtgactaa----------gcacttttaaaacacattcattggccatttggagac-tttttggggggatgtgccagttcaaacatttttgcca-tttttg-atgagtcttttttgatttatagacgc------tcgtattttctaaatatgtctt-cagtgagaa--acgttttacaaatgtcttctcccacccgagattggccttttcattctccatgctgtcttttggagaaaagttgttcatatttttaatgaagtcccatttatcaattacttattttgtggaaagaaaac-tttttttgttgtgtttaagaatcttggtttctctgaaggatgtgaaggtatttttcttgtgttttctgctg-aaaatgttattgttttacatgtcacatttagatctgtgacccatctcatttaatgttttgtgcaatatatgaggtggCAACCA------------TGgtgt---gtgtgtgtgtgtgtgtgtgtgtgtatgtctgtgtctgtgtc----tctgg--gtgtgtgtgt i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1398355 507 - 10304083 gcatttcctgtgg--------ttaactttatattttcctggtgactaa----------gcacttttaaaacacattcattggccatttggagac-ttttttgggggatgtgccagttcaaacatttttgcca-tttttg-atgagtcttttttgatttatagacgc------tcgtattttctaaatatgtctt-cagtgagaa--acgttttacaaatgtcttctcccacccgagattggccttttcactctccatgctgtcttttggagaaaagttgttcatatttttaatgaagtcccatttaccaattacttatttcgtggaaagaaaac-tttttttgttgtgtttaagaatcttggtttctctgaaggatgtgaaggtatttttcttgtgttttctgctg-aaaatgttattgttttacatgtcacatttagatctgtga-ccatctcatttaatgttttgtgcaatatatgaggtggCAACCA------------TGgtgt---gtgtgtgtgtgtg------------------tgtctgtgtctgtgtctgggtgtgtgtgtgt i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1475046 506 - 107702431 gcatttcctgtgg-------tttaacttcatattttcctggtgactaa----------gcacttttaaaacacattcattggccatttggagac-ttttttgggggatgtgccagttcaaacatttttgcca-tttttg-atgagtcttttttgatttatagacgc------tcatattttctaaatatgtctt-cagtgagaa--atgttttacaaatgtcttctcccacccgagattggcctttccactctccatgctgtcttttggagaaaagttgttcatatttttaatgaagtcccatttatcaattacttatttcgtggaaagaaaacttttttttgttgtgtttaagaatcttggtttctctgaaggatgtgaaggtatttttcttgtgttttctgctg-aaaatgttattgttttacatgtcacatttagatctgtgacccatctcatttaatgttttgtgcaatatatgaggtggcaacca------------ag---------gtgtgtgtgtgtgtg--------------tgtctgtgtctgtgtctgg--gtgtgtgtgt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 958461 510 - 2200435 GCATTTCCtgtgg--------ttaactttatattttcctggtgactaa----------gcacttttaaaacacattcattggccatttggagac-ttttttgggggatgtgccagttcaaacatttttgcca-tttttg-atgagtcttttttgatttatagacgc------tcatattttctaaatatgtctt-cagtgagaa--acgttttacaaatgtcttctcccacccgagattggccttttcactctccgtgctgtcttttggagaaaagttgttcatatgtttaatgaagtcccatttatcaattacttatttcgtggaaagaaaac-tttttttgttgtgtttgagaatcttggtttctctgaaggatgtgaaggtatttttcttgtgttttctgctg-aaaatgttattgttttacatatcacatttagatctgtgacccatctcatttaatgttttgtgcaatatatgaggtggCAACCA------------TGgtgt---gtgtgtgtgtgtgtgtg--------------tgtctgtgtctgtgtctgg--gtgtgtgtgt i manLeu1.NW_012103754v1 I 2685 C 0 s colAng1.NW_012118821v1 1395375 511 - 13651311 gcatttcctgtgtcctgtggtttaactttattttttcctggtgactaa----------gcacttttaaaatacattcattggccatttggagactttttttgggggatgtgccagttcaaatatttttgcca-tttttg-atgagtcttatttgatttatagatgc------tcatattttctgaatatgactt-cagtgagaa--atgttttacaaatatcttctcccacccgagattggccttttcactctccatgctgtcttttggagaaaagttgttcatatttttaatgaagtcccatttatcaattacttatttcgtggaaagaaaac-tttttttgttgtgtttaagaatcttggtttctctgaaggatgtgaaggtatttttcttgtgttttctgctg-aaaatgttattgttttacatgtcacatttagatctgtgacccatctcatttaatgttttgtgcaatatatgaggtggCAACCA------------TGgtgt---gtgtgtgtgtgtg----------------------tgtgtctgtgtctgg--gtgtgtgtgt i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1389297 531 - 108792865 gcatttcctgtgg-------tttaactttacattttcctgatgactaa-ttatcctgagtacttttaaaatacattcattggccatttggagac-cctttttggggatgtgccagttcaaacattttttcca-tttttt-atgggtcttttttgatttatagatactcatattcatattttctaaataagtcttgtagtgagaaatacgttttacatatatcttcttgcagctgagattggccttttcactctctatgctgcttttaaaaaaaaagttgtttatatttttaatgaagtcccatttatcaattgcttatttcatgtcaagaaaac-ttcttttgttgtgtttaagaatcttgctttctctgaaggatgtgaagatatttttcttgtgttttctccagaaaaacattactg-tttgcatgtcacatttagatctgtgatccatctcatttaatgttttgtgcaacatatgaggtggcaaccaagctgtgtgtgtctgtgt---gtgtgtgtgtctgggtgtgtc----------tgtgtgtgtgtgtgt---------------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1234077 498 - 7082604 gcatttcctgtgg-------tttaactttacatttccctgatgactaa-ttatcctgagtacttttaaaatacattcatt-gccatttggagac-cctttttggggatgtgccagttcaaacattttttcca-tttttt-atgggtcttttttgatttatagatgc------tcatattttctaaatatgtctt-tagtgagaaatatgttttacaaatatcttctcccagctgagattggccttttgactctctatgctgtcttttaaagaaaagttgtttatattttaaatgaagtctcatttatcaattgcttatttcatgtcaagaaaac-ttcttttgttgtgtttaagaatcttgctttctctgaaggatgtgaagatatttttcttgtgtttcctccag-aaaacattactg-tttgcatgtcacatttagatctgtgatccatctcatttaatgttttgtgcaacatatgaggtggCAACCA------------Ctgtgt---gtgtgtgtg----------------------tgtgtgtgtgtgtgt---------------- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1322571 499 + 1864846 gcatttcctgtgg-------tttaactttacattttcctgatgactaa-ttatcctgattacttttaaaatacattcattggccatttggagac-cc-ttttggggatgtgccagctgaaatattttttcca-ttttttaatgggccctttttgatttatagatgc------tcatattttctaaatacgtctt-tagtgagaaatatattttacaaatatcttctcccagctgagattggccttttcactctctgtgctgtcttttaaagaaaagttgtttatatttttaatgaagtcccatttatcaattgcttatttcacgtcaagaaaac-ttcttttgttgtgtttaagaatcttgctttctctgaaggatgtgaagatatttttcttgtgttttctctgg-aaaacattactg-tttgcatgtcacatttatgtctgtgatccatctcatttaatgttttgtgcaacatatgaggtggcaacca------------aggtGC---gtgtgtctg----------------------tgtgtgtgtgtgtgt---------------- i cebCap1.NW_016107827v1 C 0 I 262 s aotNan1.NW_018513311v1 117357 459 + 287728 gcatttcctgtgg-------tttaactttacatttcactg-----------------------------------------gccatttgaagac-gctttttggggatgtgccagttcaaacattttttcca-tttttc-atgggtcttttttgatttatagatgc------tcagattttctaaatatgtctt-tagtgagaaatatgttttacaaatatcttctcccagctgagattgacctttccactctctatgctgtctttcaaagaaaagttgtttatatttttaatgaagtcccatttatcaattgcttatttcatgtcaagaaaac-ttcttttgttgtgtttaagaatcttgctttctctgaaggatgtgaagatatttttcttgtgttttctctgg-aaaacattactg-tttgcatgtcacatttagatctgtgattcatctcatttaatcttttgtgcaacatatgaggtggCAACAA------------AGATAt---gtgtgtctg----------------------tgtgtgtgtgtttgt---------------- i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I a score=40325.000000 s hg38.chr2_KI270774v1_alt 129521 6 + 223625 gtgtAT s panTro5.chr2A 1417248 6 + 111504155 gtATAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1366292 6 + 114371477 gtATAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1390860 6 + 1464242 gtATAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1113747 6 + 81552678 GTATAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1444262 6 + 108979918 ATATAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1416696 6 - 111193037 ATATAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1444604 6 + 3644372 ATATAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1398862 6 - 10304083 ATATAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1475552 6 - 107702431 ATATAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 958971 6 - 2200435 ATATAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1395886 6 - 13651311 gtATAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1389828 6 - 108792865 gtgtgt i calJac3.chr14 C 0 I 28 s saiBol1.JH378218 1234575 6 - 7082604 gtgtgt i saiBol1.JH378218 C 0 M 432 s aotNan1.NW_018513311v1 117816 6 + 287728 ttgtAT i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I a score=419791.000000 s hg38.chr2_KI270774v1_alt 129527 55 + 223625 tgtaaaccaaaaataaaattctaa-gtcttgcgatcatctgaattgacccctcctg s panTro5.chr2A 1417254 55 + 111504155 tgtaaaccaaaaataaaattctaa-gtcctgcgatcatctgaattgacccctcctg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1366298 55 + 114371477 tgtaaaccaaaaataaaattctaa-gtcctgcgatcatctgaattgacccctcctg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1390866 55 + 1464242 tgtaaaccaaaaataaaattctaa-gtcctgcgatcatctgaattgacccctcctg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1113753 55 + 81552678 tgtaaaccaaaaataaaattctca-gtcctgcgatcatctgaattgacccctcctc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1444268 55 + 108979918 tgtaaaccaaaaataaaattctaa-gtcctgcgatcatctgaattgacccctcctc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1416702 55 - 111193037 tgtaaaccaaaaataaaattctaa-gtcctgcgatcatctgaattgacccctcctc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1444610 55 + 3644372 tgtaaaccaaaaataaaattctaa-gtcctgcgatcatctgaattgacccctcctc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1398868 55 - 10304083 tgtaaaccaaaaataaaattctaa-gtcctgcgatcatcggaattgacccctcctc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1475558 55 - 107702431 tgtaaaccaaaaataaaattctaa-gtcctgcgatcatctgaattgacccctcctc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 958977 55 - 2200435 tgtaaaccaaaaataaaattctaa-gtcctgcgatcatcggaattgacccctcctc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1395892 55 - 13651311 tgtaaaccaaaaataaaattctaa-gtactgcaatcatctgaattgacccttcctc i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1389862 56 - 108792865 tgtaaaccaaaaataaaattctaaggtctcctggtcatctgaattgacctctcatc i calJac3.chr14 I 28 C 0 s aotNan1.NW_018513311v1 117822 55 + 287728 tgtaaaccaaaaataaaattctaa-gtcccctgatcatctgaattgacctctcatc i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e saiBol1.JH378218 1234581 432 - 7082604 M e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I a score=4808743.000000 s hg38.chr2_KI270774v1_alt 129582 588 + 223625 ttggcaagggtgttccaaagctaacctgaaaaactaa-tctgaccgtgatg--gggagagtgaggtcagacgtgcctcatgacaccctcctcccttttggaatttctgctagaacagacttcttaactctgagaagaaacatttacagtctcttctctcagaagcctgctgcctggagacttcacctgcacgatgaaaccttggtctccacaa----cctgtgtcttaacccagacagtcttaagtccttagacgataactttactctttcaaaaaattgccactcagaaaatttttgaatctacctttggcctagaagcccccgcttccagatgtcctgcctttttgtactgaaccagtgtacatcttacatgtatttgattgatgtcttgtgtctccctaaaatatat-gaaactaagctgtgcctcaaccaccttggacacaagttctcaggatctcctgagggctgaatcattggccattggtcactcatatctggctcagaataaatctcttcaactattttacagagcttgactcttCACTGACAatatctataagtgtttgtgtatatatagaggcatgtatatatagg s panTro5.chr2A 1417309 580 + 111504155 tcggcaagggtgttccaaagctaacctgaaaaactaa-tctgaccatgatg--ggg----tgaggtcagacgtgtctcatgacaccctcctcccttttggaatttctgctagaacagactttttaactccgagaagaaacatttacaatctcttctctcagaagcctgctgcctggagacttcacctgcacgatgaaaccttggtctccacaa----cccgtgtcttaacccagacaatcttaagtccttagacgataactttactctttcaaaaaattgccactcagaaaatttttgaatctacctttggcctagaagcccccgcttccagatttcctgcctttctgtactgaaccaatgtacatcttacgtgtatttgat----gtcttgtgtctccctaaaatatat-gaaactaagctgtgcctcaaccaccttggacacaagttctcaggatctcctgagggctgaatcattggccattggtcactcatatttggctcagaataaatctcttcaactattttacagagcttgactcttcattgacaATATCTGTAGGTGTTTGTGtatatatagaggcatgtatatatagg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1366353 580 + 114371477 tcggcaagggtgttccaaagctaacctgaaaaactaa-tctgaccatgatg--ggg----tgaggtcagacgtgtctcatgacaccctcctcccttttggaatttctgctagaacagactttttaactccgagaagaaacatttacaatctcttctctcagaagcctgctgcctggagacttcacctgcacgatgaaaccttggtctccacaa----cccgtgtcttaacccagacaatcttaagtccttagacgataactttactctttcaaaaaattgccactcagaaaatttttgaatctacctttggcctagaagcccccgcttccagatttcctgcctttctgtactgaaccaatgtacatcttacgtgtatttgat----gtcttgtgtctccctaaaatatat-gaaactaagctgtgcctcaaccaccttggacacaagttctcaggatctcctgagggctgaatcattggccattggtcactcatatttggctcagaataaatctcttcaactattttacagagcttgactcttcattgacaATATCTGTAGGTGTTTGTGtatatatagaggcatgtatatatagg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1390921 586 + 1464242 tcggcaagggtgttccaaagctaacctgaaaaactaa-tctgaccatgatg--gggagagcgaggttagacgtgcctcatgacaccctcctcccttttggaacttctgctagaacagaattcttaactctgagaagaaacgtttacaatctctcctctcagaagcctgctgcctggaggcttcacctgcacgatgaaaccttggtctccacaa----cccgtgttttaacccagacaatcttaagtccttagacgataactttactctttcaaaaaattgccactcagaaaatttttgaatctacttttggcctagaagcccccgcttccagatgtcctgcctttctgtactgaaccaatgtacatcttacatgtatttgattgatgtcttgtgtctccctaaaatgtat-gaaactaagctgtgcctcaaccaccttggacacaagttctcaggatctcctgagggctgaatcattggccattggtcactcatatttggctcagaataaatctcttcaactattttacagagcttgactcttcattgacaatatctataggtg--tgtgtatatatagaggcatgtatatatagg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1113808 588 + 81552678 tctgcaagggcattccaaagctaacctgaaaaactaattccaaccatgatg--gagagagcgaggtcagacgtgcctcatgacaccctcctcctttttggaatttctgctagagcaga-tacttaactctgagaagaaacatttacaatctcttctcttggaagcctgctgcctggagacttcacctgcacgatgaaatcttggtctccacaa----cctgtgtcttaacccagacactcctaagtccttagatgataactttactctttcaaaaaattgccactcagaaaatttttgaatctacccttggcctggaagcccccacttccagatgtcctgcctttctggactgaaccaatgtacattttacatgtatttgattgatgtcttgtgtctccctaaaatgtat-gaaactaagctgtgcctcaaccaccttggacacatgttctcaggatctcctgagggctgaatcattggccattggtcactcatatttggctcagaataaatctcttcaactattttacagagcttgactcttCGTTGACAAtatctgtaagtgcgtgtgtatatatagaggcatgtatatatagg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1444323 585 + 108979918 tcagcaagggcgttccaaagctaacctgaaaaactaattcagaccatgatg--gggagagcgaggtcagatgtgcctcatgacaccctcctcccttttggaattactgctagaacaga---cttaactct-agaagaaacatttacaatctattctctcagaggtctgctgcctggagacttcacctgcatgatgaaaccttggtctccacaa---ccccgtgtcttaacccagacactcctaagtccttagacaataactttactctttcaaaaaattgccaatcagaaaactcttgaatctacctttgacctggaagccccctcctccggatgtcctgcctttctgcactgaaccaatgtacatcttacatgtattcgactgatgtctcgtgtctccctaaaacatat-gaaactaagctgtgcctcaaccaccttggacacgt-ttctcaggatctcctgagggctgagtcattggccattggtcactcatatttggctcagaataaatctcttcaactattttacagagcttgactctttACTGACAATATCtgtaggtgtgtatgtatatatagaggcatgtatatgtagg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1416757 585 - 111193037 tcagcaagggcgttccaaagctaacctgaaaaactaattcagaccatgatg--gggagagcgaggtcagatgtgcctcatgacaccctcctcccttttggaattactgctagaacaga---cttaactct-agaagaaacatttacaatctattctctcagaggtctgctgcctggagacttcacctgcatgatgaaaccttggtctccacaa---ccccgtgtcttaacccagacactcctaagtccttagacaataactttactctttcaaaaaattgccaatcagaaaactcttgaatctacctttgacctggaagccccctcctccggatgtcctgcctttctgcactgaaccaatgtacatcttacatgtattcgactgatgtctcgtgtctccctaaaacatat-gaaactaagctgtgcctcaaccaccttggacacgt-ttctcaggatctcctgagggctgagtcattggccattggtcactcatatttggctcagaataaatctcttcaactattttacagagcttgactctttACTGACAATATCtgtaggtgtgtatgtatatatagaggcatgtatatgtagg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1444665 585 + 3644372 tcagcaagggcgttccaaagctaacctgaaaaattaattcagaccatgatg--gggagagcgaggtcagatgtgcctcacgacaccctcctcccttttggaattactgctagaacaga---cttaactct-agaagaaacatttacaatctgttctctcagaggtctgctgcctggagacttcacctgcatgatgaaaccttggtctccacaa---ccccgtgtcttaacccagacactcctaagtccttagacaataactttactctttcaaaaaattgccaatcagaaaactcttgaatctacctttgacctggaagccccctcctccggatgtcctgcgtttctgcactgagccaatgtacatcttacatgtattcgactgatgtctcgtgtctccctaaaacatat-gaaactaagctgtgcctcaaccaccttggacacgt-ttctcaggatctcctgagggctgagtcattggccattggtcactcatatttggctcagaataaatctcttcaactattttacagagcttgactctttACTGACAATATCtgtaggtgtgtatgtatatatagaggcatgtatatgtagg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1398923 585 - 10304083 ttggcaagggcgttccaaagctaacctgaaaaactaattcagaccatgatg--gggagggcgaggtcagatgtgcctcatgacaccctcctcccttttggaattactgctagaacaga---cttaactct-agaagaaacatttacaatctattctctcagaagtctgctgcctggagacttcacctgcatgatgaaaccttggtctccacaa---ccccgtgtcttaacccagacactcctaagtccttagacaataactgtactctttcaaaaaattgccaatcagaaaattcttgaatctacctttgacctggaagccccctcctccggatgtcctgcctttctgcactgaaccaatgtacatcttacatgtattcgactgatgtctcatgtctccctaaaatgtat-gaaactaagctgtgcctcaaccaccttggacacgt-ttctcaggatctcctgagggctgagtcattggccattggtcactcatatttggctcagaataaatctcttcaactattttacagagcttgactctttACTGACAATATCtgtaggtgtgtatgtatatatagaggcatgtatatgtagg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1475613 585 - 107702431 tcggcaagggcgttccaaagctaacctgaaaaactaattcagaccatgatg--gggagagcgaggtcagatgtgccttatgacaccctcctcccttttggaattactgctagaacaga---cttaactct-agaagaaacatttacaatctattctctcagaggtctgctgcctggagacttcacctgcataatgagaccttggtctccacaa---ccccgtgtcttaacccagacactcctaagtccttagacaataactttactctttcaaaaaattgccaatcagaaaattcttgaatctacctttgacctggaagccccctcttccggatgtcctgcctttctggacggaaccaatgtacatcttacatgtattcgactgatgtctcgtgtctccctaaaacatat-gaaactaagctgtgcctcaaccaccttggacacgt-ttctcaggatctcctgagggccgagtcattggccattggtcactcatatttggctcagaataaatctcttcaactattttacagagcttgactctttACTGACAATATCtgtaggtgtgtatgtatatatagaggcatgtatatgtagg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 959032 585 - 2200435 ttggcaagggcgttccaaagctaacctgaaaaactaattcagaccatgatg--gggagagcgaagtcagatgtgcctcatgacaccctcctcccttttggaattactgctagaacaga---cttaactct-agaagaaacatttacaatctattctctcagaagtctgctgcctggagacttcacctgcatgatgaaaccttggtctccacaa---ccccgtgtcttaacccagacactcctaagtccttagacaataactgtactctttcaaaaaattgccaatcagaaaattcttgaatctgcctttgacctggaagccccctcctccggatgtcctgcctttctgcactgaaccaatgtacatcttacatgtattcgactgatgtcttgtgtctccctaaaatgtat-gaaactaagctgtgcctcaaccaccttggacacgt-ttctcaggatctcctgagggctgagtcattggccattggtcactcatatttggctcagaataaatctcttcaactattttacagagcttgactctttACTGACAATATCtgtaagtgtgtatgtatatatagaggcatgtatatgtagg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1395947 585 - 13651311 tcagcaagggcgttccaaaactaacctgaaaaactaattcagaccatgatg--gggagagcaaggtcagatgtgcctcatgacaccctcctcccttttggaattactgctagaacaga---cttaactct-agaaaaaacatttacaatctattctctcagaagcccgctgtctggagacttcacctgcatgatgaaaccttggtctctacaa---ccccgtgtcttaaccccgacactcccaagtccttagacaataactttactctttcaaaaaattgccaatcagaaaatttttgaatctaccgttgacctggaagcccccacttccggatgtcctgcctttctggactgaaccaatgtacatcttacatgtattccactgatgtctcgtgtctccctaaaacatat-gaaactgagctgtgcctcaaccaccttggatacgt-ttctcaggatctcctgagggctgagtcactggccattggtcactcatatttggctcagaataaatctcttcaactattttacagagcatgactctttACTAACAATATCtgtaggtgtgtatgtatatatagaggcatgtatatgtagg i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1389918 592 - 108792865 tcagcaagggcattccaaagctaacctgaaaaactaattcagagcatgatg--ggaagagggtggtcagacatgcctcattacaccc-cctccatttgggaattactgctggaacagacttgttaactccaagaacaaacatttgcaattgattctctctcaaccctgctgcctggagacttcacctgcaagatgaaaccttggtgtccacaacaaccccgtgtctccacccacacattcctaagtccttagacaataacttaactcttacaaaaaattgccaattagaaaaattttaaatctacctttgacctggaag-cctggcttccagttgtcccacctttccagactgaaccaatgtccatcttacatgtctttgattgatgtctcatttctccctaaaatgtacgaaaactaagctgtgcctcaaccaccttggacacatgttcccaggatgtgctgaggactgtgccattgcccattgctcattcatatttggctcagaataaatctcttctactattttatagagcttgacccttCATTGAGAGTATCTATAGGTGTCTGTGTATATATAGAAGCCTGTATATACAGG i calJac3.chr14 C 0 I 817 s saiBol1.JH378218 1235016 587 - 7082604 tcagcaagggcattccaaagctaacctgaaaaactaattcggagcatgatg--ggaagagggtggtcaaacgtgcctcattacaccc-cttccatttgggaattactgctggaacagacttgttaactctgagaacaaacatttgcactcgatcctctctcaaccctgctgactggtgacttcacctgcaagatgaacccttggtgtccacaaccaccccgtgtctccacccacacattcctaagtccttagacaataacttaactctttcaaaaaattgccaattagaaaatttttgaatctacctttgacctggaag-cctggcttccggttgtcctgcctttctggactgaaccaatgtccatcttacatgtct----ttgatgtctcatttctccctaaaatgtat-aaaactaagatgtgcctcaaccgccttggacacatgttcccaggatgtgctgagggctgtgccgttggccattggtcactcatatttggctcagaataaatctcttcaactatttcatagagcttgacccttcattgacaatatctataggtgtgtgtgtatatatagaggcctatatatatagg i saiBol1.JH378218 M 432 C 0 s aotNan1.NW_018513311v1 117877 590 + 287728 tcagcaagggcgttccaaagctaacctgaaaaactaattcagagcatgatgtcggaagagggaggtcagacgtgcctcattacaccc-cctccatttgggaattactgctgaaa-agacttgttaactgtgaaaacaaacatttgcaatcgattctctctcaaccctgctgcctggagacttcacctgcaagatgaaaccttggtgtccacaacaaccccgtgtctccacccacacattcctaagtccttagacaataacttaactctttcaaaaaattgccaattagaaaatttttgaatctacctttgacctggaag-cccggcttccagttgtcccgcctttctggactgaaccaatgtccatcttacatgtctttgattgatgtcccatttctccctaaaatgtat-aaaactaagctgtgcctcaaccaccttggacacatgttcccaggatctgctgagggctgtgccattggccattggtcactcatatttggctcagagtaaatctcttcaactgtgttacagagcttgacccttcattgacaGTATCTATAGGTGTGTGTG--TATATAGAGGCCTGTATATATAGG i aotNan1.NW_018513311v1 C 0 I 16 e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I a score=101988.000000 s hg38.chr2_KI270774v1_alt 130170 14 + 223625 tagatttgt--atgtg s panTro5.chr2A 1417889 14 + 111504155 tagatttgt--gtgtg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1366933 14 + 114371477 tagatttgt--gtgtg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1391507 14 + 1464242 tagatttgt--atgtg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1114396 14 + 81552678 tagatttgt--atgtg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1444908 14 + 108979918 tagatttgt--atgtg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1417342 14 - 111193037 tagatttgt--atgtg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1445250 14 + 3644372 tagatttgt--atgtg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1399508 14 - 10304083 tagatttgt--atgtg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1476198 12 - 107702431 tagattt----gtgtg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 959617 16 - 2200435 tagatttgtacgtgtg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1396532 14 - 13651311 tagatttgt--atgtg i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1391327 14 - 108792865 tagatgtgt--gtgtg i calJac3.chr14 I 817 C 0 s saiBol1.JH378218 1235603 14 - 7082604 tagatgtgt--gtgtg i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 118483 14 + 287728 tgtgtgtgt--gtgtg i aotNan1.NW_018513311v1 I 16 C 0 e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724593 22 + 4416731 I a score=55255.000000 s hg38.chr2_KI270774v1_alt 130184 11 + 223625 --tgtgtgt------------atat s panTro5.chr2A 1417903 23 + 111504155 --tgtgtgtgtgtgtgtgtatatat i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1366947 17 + 114371477 --tgtgtgt------gtgtatatat i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1391521 13 + 1464242 --tgtgtgt----------gtatat i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1114410 15 + 81552678 --tgtgtgt--------atatattt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1444922 9 + 108979918 --tgtgtgt--------------at i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1417356 9 - 111193037 --tgtgtgt--------------at i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1445264 9 + 3644372 --tgtgtgt--------------at i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1399522 9 - 10304083 --tgtgtgt--------------at i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1476210 9 - 107702431 --tgtgtgt--------------at i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 959633 9 - 2200435 --tgtgtat--------------at i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1396546 9 - 13651311 --tgtgtgt--------------at i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1391341 9 - 108792865 --tgtgtgt--------------gt i calJac3.chr14 C 0 I 2420 s saiBol1.JH378218 1235617 9 - 7082604 --tgtgtgt--------------gt i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 118497 9 + 287728 --tgtgtgt--------------gt i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1724615 11 + 4416731 tgtgtgtgt--------------at i dasNov3.JH576208 I 22 C 0 e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I a score=2583403.000000 s hg38.chr2_KI270774v1_alt 130195 335 + 223625 atctataat--aaacacag--gtctata---tagaggggt----gtgcgtg----tatgtatgtatagatatgtgtgtgtgaaagcatgtgtatatgATattta-----ttcagaaccatcctttacccagtgaactgcacccatgcctatatcatgaatcgagtagccacatgtgtgtgggcgaggactgctagactcttaccattat-----------------------gtACACAATTATGAGAGAGAGGGA---GAGAACCTGAGTTAAACAATTAGCCACACTTCTCTTTAAGCCTACTGAGAAAAAGACACAGGGACCCAGCAGACAT---CAGAACACC-----------TTGTTG----GGGCAGCTC-GCACTGGGGCGCAGGTGGCAGA s panTro5.chr2A 1417926 335 + 111504155 atctataat--aga----g--gtctata---taGAGGGGT----GTGTATG----TGTGCATGTATAGAT--GTGTGTGTGAAAGCATGTGTATATGATATTTAatttattcagaaccatcctttacccagtgaactgcacccatgcctatatcatgaatcgagtagccatatgtgtgtgggCGAGGACTGCTAGACTCTTACCATTAC-----------------------GTATACAATTATGAGAGAGAGGGA---GAGAACGTGAGTTAAACAATTAGCCACACTTCTCTTTAAGCCGACTGAGAAAAAGACACAGGGACCCAGCAGACAT---CAGAACACC-----------TTGTTG----GGGCAGCTCCGCACTGGGGCGCAGGTGGCAGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1366964 335 + 114371477 atctataat--aga----g--gtctata---tagaggggt----gtgtatg----tgtgcatgtatagat--gtgtgtgtgAAAGCATGTGTATATGATATTTAatttattcagaaccatcctttacccagtgaactgcacccatgcctatatcatgaatcgagtagccatatgtgtgtgggCGAGGACTGCTAGACTCTTACCATTAC-----------------------GTATACAATTATGAGAGAGAGGGA---GAGAACGTGAGTTAAACAATTAGCCACACTTCTCTTTAAGCCGACTGAGAAAAAGACACAGGGACCCAGTAGACAT---CAGAACACC-----------TTGTTG----GGGCAGCTCCGCACTGGGGCGCAGGTGGCAGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1391534 340 + 1464242 atatataat--aaagagag--gtctata---taGAGGGgt----gtgtgtg----tgtgtatgtataggaacgtgtgtgtgAAAGCATGTGTATATGATATTTAatttattcagaaccatcctttacccagtgaactgcacccatgcctacatcgtgaatcgagtagccatatgtgtgtgggCGAGGACTGCTAGACTCTTACCATTAT-----------------------GTGTATAATTATGAGAGAGAGGGA---GAGAACGTGAGTTAAACAATTAGCCACACTTCTCTTTAAGCCTACTGAGAAAAAGACACAGGGACCCAGCAGACAT---CAGAACACC-----------TTGTTG----GGGCAGCTC-ACACTGGGGCGCAGGTGGCAGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1114425 347 + 81552678 atctataat--agagagggctgtatcta---tagaggcat----gtgtgtgtgtttgtgtatgtatagatatatgtgtatgaaagcatatgtatatgatatttaatttattcagaaccatcctttacccagtgaactgcacccatgcctgtatcataaatcgagtagccatatgtgtgtgggtgaggactgctagacccttactattat-----------------------gtATACAATTATGAGAGAGAGGGA---GAGAATGTGAGTTAAGCAATTAGCCACATTTCTTTTTCAGCCTACTGAGAAAAAGACACAGGGACCCCGTGGACAT---CAGAACACC-----------TTGTTG----GGGCAGCTCCACACTGGGGTGCAGGTGGCAGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1444931 340 + 108979918 atatataatagagagagag--gtctgtatt-tatagaggc----atgggtg----tgtgtatgtttaga----tgtgtgtGAAAGCATATGTATATGACATTTAATGTATTCTGAACCATCCTTTACCCAGTGAACTGCACCAGTGCCTGTATCATGAATTGAGTAGCCATATGTGTGTGGGTGAGGACTGCTAGACTCTTACCATCAT-----------------------GTATATAATTATGAGAGAGAGGGA---GAGAATGTGAGTTAGGCAATTAGCCACACTCGTCTTTACGCCTGCTGAGAAAACGACACAGGGACCCAGCGG-CAT---CAGAACACC-----------TTGTTG----GGGCAGCTCTGCACTGGGGCGCAGGTGACAGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1417365 340 - 111193037 atatataatagagagagag--gtctgtatt-tatagaggc----atgggtg----tgtgtatgtataga----tgtgtgtgaaagcatatgtatatgACATTTAATGTATTCTGAaccatcctttacccagtgaactgcaccagtgcctgtatcatgaattgagtagccatatgtgtgtgggtGAGGACTGCTAGACTCTTACCATCAT-----------------------GTATATAATTATGAGAGAGAGGGA---GAGAATATGAGTTAGGCAATTAGCCACACTCGTCTTTACGCCTGCTGAGAAAACGACACAGGGACCCAGTGG-CAT---CAGAACACC-----------TTGTTG----GGGCAGCTCTGCACTGGGGCGCAGGTGACAGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1445273 340 + 3644372 atatataatagagagagag--gtctgtatt-tatagaggc----atgggtg----tgtgtatgtataga----tgtgtgtGAAAGCATATGTATATGACATTTAATGTATTCTGAACCATCCTTTACCCAGTGAACTGCACCAGTGCCTGTATCATGAATTGAGTAGCCATATGTGTGTGGGTGAGGACTGCTAGACTCTTACCATCAT-----------------------GTATATAATTATGAGAGAGAGGGA---GAGAATGTGAGTTAGGCAGTTAGCCACACTCGTCTTTACGCCTGCTGAGAAAACGACACAGGGACCCAGTGG-CAT---CAGAACACC-----------TTGTTG----GGGCAGCTCTGCACTGGGGCGCAGGTGAGAGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1399531 340 - 10304083 atatataat----agagag--gtctgtatt-tatagaggc----gtgggtg----tgtgtatgtatagatgtgtgtgtgtgAAAGCATATGTATATGACATTTAATGTATTCTGAACCATCCTTTACGCAGTGAACTGCACCAGTGCCTGTATCATGAATTGAGTAGCCATATGTGTGTGGGTGAGGACTGCTAGACTCTTACCATCAT-----------------------GTATATAATTATGAGAGAGAGGGA---GAGAATGTGAGTTAGGCAATTGGCCACACTCCTCTCTACACCTGCTGAGAAAAAGACACAGGGACCCAGCGG-CAT---CAGAACACC-----------TTGTTG----GGGCAGCTCTGCACTGGGGCGCAGGTGACAGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1476219 340 - 107702431 gtatataat----agagag--gtctgtatt-tatagaggt----gtgggtg----tgtgtatgtatagatgtgtgtgtgtgAAAGCATATGTATATGACATTTAATGTATTCTGAaccatcctttacccagtgaactgcaccagtgcctgtatcatgaattgagtagccatatgtgtgtgggtGAGGACTGCTAGACTCTTACCATCAT-----------------------GTATATAATTATGAGAGAGAGGGA---GAGAATGTGAGTTAGGCAATTAGCCACACTCCTCTTTACACCTGCTGAGAAAAAGACACAGGGACCCAGCGG-CAT---CAGAACACC-----------TTGTTG----GGGCAGCTCTGCACTGGGGCGCAGGTGACAGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 959642 340 - 2200435 atatataat----agagag--gtctgtatt-tatagaggc----gtgggtg----tgtgtatgtatagatgtgtgtgtgtgAAAGCATATGTATATGACATTTAATGTATTCTGAACCATCCTTTACCCAGTGAACTGCACCAGTGCCTGTATCATGAATTGAGTAGCCATATGTGTGTGGGTGAGGACTGCTAGACTCTTACCATCAT-----------------------GTATATAATTATGAGAGAGAGGGA---GAGAATGTGAGTTAGGCAATTAGCCACACTCCTCTTTACACCTGCTGAGAAAAAGACACAGGGACCCAGCGG-CAT---CAGAACACC-----------TTGTTG----GGGCAGCTCTGCACTGGGGCGCAGGTGACAGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1396555 347 - 13651311 atatataataaagagagag--gtctgtatt-tatagaggcgtgtgtgtgtg----tgtgtatgtatagatgtgtgtgtgtgaaagcatatgtatgtgACATTTAATGTATTCTGAactatcctttacccaatgaagtgcaccagtgcctgcatcatgaattgagtagccatatgtgtgtgggtGACGACTGCTAGACTCTTACCATCAT-----------------------GTATATAATTATGAGAGAGAGGGA---GAGAATGTGAGTTAGGCAATTAGCCACACTCCTCTTTGCGCCTGCTGAGAAAAAGACACAGGGA-CCAGCAG-CAT---CAGAACACC-----------TTGCTG----GGGCAGCTCTGCACTGGGGTGCAGGTGGCAGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1393770 332 - 108792865 ATCCGTAATAAAGACTGAG--ATCTGTAGT-TATAGAGgt----gtgtgta----tatatatagatgtgtgtgtgtgtgtgaaagtgtacatatatgATATTTAatttattcagagccatcttttgcccaaggaactgcaccagtgcctgtatcatgaatcaggtagccatatgagtgtgggtGAGGACGGCCAGACTCTTACCATTGT-----------------------GTTTATAATTATGAGAGGGAGGGA---GAGAGCTCAAGTTATACAGTCAGTCACACTCCTTTTTAAGC---------------AGCAGGGACCCAGCGGACATCCCCAGAATGCC-----------TTGTTG----GGGCAGAACCGCCCT-GGGCGCAGGTGGCAGG i calJac3.chr14 I 2420 C 0 s saiBol1.JH378218 1235626 330 - 7082604 atctacaataaagacagag--gtctgtgtt-tatagaggt----gtgtata----tatatatgtatagatgtgtgtgcgtgaaagcatatgtatatgatatttaATTTATTCAGAACCATCCCTTAACCAATGAACTCTACCAGTGGCTGTATCATGAATCAGGTAGCCATCTGTGTGTGGGTTAGAACTGCCAGACTCTTACCTTTGT-----------------------GTTTATAATTATGAGACAGAGGGA---GAGAGCATGAGTTAGACAATCAGTCACATTCCTCTTTAAGC---------------GACAGGGACCCAGTGGATAT---CAGAATGCC-----------CTGTTG----GGGCAGAACCACCCTGGGGTGCAGGTGGCAGA i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 118506 330 + 287728 ATCTGTAACAAAGGCAGAG--GTCTGTATT-TATAGAGGC----GTGTGTA----TATATATGTATAGATGGGTGTGTGTGAAAGCATATGTATGTGATATTTAatttattcagaaccatactttacccaatgaacctcaccagtgcctgtctcatgaatcgggtagccatatgtgtgcgggCAAGGACTGCCAGACTCTTACCATTGT-----------------------GTTTATAATTATGAGAGGGAGGGA---GAGAGCATGAGTTAGACAATCAGTCACACTCCTCTTTAAGC---------------GACAGGGACCCAGCGGACAT---CAGCACGCC-----------TCGTTG----GGGCAGAACTGCCCTGGGGCGCAGGTGGCAGA i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1724626 364 + 4416731 ---------------------atatatattatacataaat----ataatta----tatatata---GTGTATGTGTatatggaattgaatttatctagcaccaattatcaaaaggaccatcctttacccactgaattgcatcaacatgtatatcattaatcagataactatatatgtatgagaggttatttcttgactcttaattacatttcaATTTCAAATACATATATTCATATATATATATTGCACACACACATATTAGCATGTGAAGCAGGGAATTAATCTTGCCCTTTTCTAAATCTATTAAGCAAAAGAGACAGGGATCCAATAA-AAC---CAAAACATCGTTGTTTTTGGTTGTTGTTAAGGGTAAAGCTACACTGGGGAACAGGTGGTGGA i dasNov3.JH576208 C 0 I 4246 e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I a score=1789246.000000 s hg38.chr2_KI270774v1_alt 130530 212 + 223625 AGCCTCACGGGATTCTGTACAGCAGGAAGAGAGGCCGGCTTCAGCCCCTCCTGCCTGACAGCACAGGGGTCCTGCCTGGCCTGGGAGGAG----CCGGGATTGGAGGCAGGGGCTGCTCCTGCCTCCAGAGGTTTCCAGGAGACTGCATGTTGTGCCCTGCCGGCATCCACACATTTGTGTAGTACCCACTCCCAGACAAGGACACTCATAGACTT s panTro5.chr2A 1418261 212 + 111504155 AGCCTCACGGGATTCTGTACAGCAGGAAGAGAGGCCGGCTTCAGCCCCTCCTGCCTGACAGCACAGGGGTCCTGCCTGGCCTGGGAGGAG----CCAGGATTGGAGGCAGGGGCTGCTCCTGCCTCCAGAGGTTTCCAGGAAACTGTATGTTGTGCCCTGCCGGCATCCACACATTTGTGTAGTACCCACTCCCAGACAAGGACACTCATAGACTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1367299 212 + 114371477 AGCCTCACGGGATTCTGTACAGCAGGAAGAGAGGCCGGCTTCAGCCCCTCCTGCCTGACAGCACAGGGGTCCTGCCTGGCCTGGGAGGAG----CCAGGATTGGAGGCAGGGGCTGCTCCTGCCTCCAGAGGTTTCCAGGAAACTGTATGTTGTGCCCTGCCGGCATCCACACATTTGTGTAGTACCCACTCCCAGACAAGGACACTCATAGACTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1391874 212 + 1464242 AGCCTCACGGGATTCTGTACAGCAGGAAGAGAGGCCGGCTTCAGCCCCTCCTGCCTGACAGCACAAGGGTCCTGCCTGGCCTGGGAGGAG----CCAGGATTGGAGGCAGGGGCTGCTCCTGCCTCCAGAGGTTTCCAGGAGACTGCATGTTGTGCCCTGCCGGCATCCACACATTTGTGTAGTGCCCACTCCCAGACAAGGACACTCATAGACTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1114772 213 + 81552678 AGCCTCACGGGATTCTGTCCAGCAGGAAGAGAGGCCGGCTTCAGCCCCTCCTGCCTGACAGCGCAGGGGTCCTGCCTGGCCTGGGAGGAG---CCCGGGATTGGCGGCAGGGGCTGCTTCTGCCTCCAGAGGTTTCCAGGAGGTCGCACGTTGTGCCCTGCCAGCATCCGCACAGCTGTGTTGTACCCAGTCCCAGACGAGGACACTCATAGATTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1445271 216 + 108979918 AGCCTCACGGGATTCTGTCCAGCAGGAAGAGAGGCCGGCTTCTGCCCCTCCCGCCTGACAGCGCATGGGTCCTGCCTCGCCTGGGAGGAGGAGCCCAGGATTGGAGGCAGGGGCTGCTCCCGCCTCCAGAGGTTTCCAGGAGGCCACATGTTGTGCCCTGCCGGCATCCACGCATTTGGGTTATACCCACTCCCAGACAAGGACACTCATGGACTT i rheMac8.chr13 C 0 I 7 s macFas5.chr13 1417705 216 - 111193037 AGCCTCACAGGATTCTGTCCAGCAGGAAGAGAGGCTGGCTTCAGCCCCTCCCGCCTGACAGCGCATGGGTCCTGCCTCGCCTGGGAGGAGGAGCCCAGGATTGGAGGCAGGGGCTGCTCCCGCCTCCAGAGGTTTCCAGGAGGCCACATGTTGTGCCCTGCCGGCATCCACGCATTTGGGTTATACCCACTCCCAGACAAGGACACTCATGGACTT i macFas5.chr13 C 0 I 7 s macNem1.NW_012011978v1 1445613 216 + 3644372 AGCCTCACGGGATTCTGTCCAGCAGGAAGAGAGGCCGGCTTCAGCCCCTCCCGCCTGACAGCGCATGGGTCCTGCCTCGCCTGGGAGGAGGAGCCCAGGATTGGAGGCAGGGGCTGCTCCCGCCTCCAGAGGTTTCCAGGAGGCCACATGTTGTGCCCTGCCGGCATCCACGCATTTGGGTTATACCCACTCCCAGACAAGGACACTCATGGACTT i macNem1.NW_012011978v1 C 0 I 7 s cerAty1.NW_012000820v1 1399871 216 - 10304083 AGCCTCACGGGATTCTGTCCAGCAGGAAGAGAGGCCGGCTTCAGCCCCTCCCGCCTGACAGCGCATGGCTCCTGCCTCGCCTGGGAGGAGGAGCCCAGGATTGGAGGCAGGGGCTGCTCCCGCCTCCAGAGGTTTCCAGGAGGCCACATGTTGTGCCCTGCCGGCATCCACGCATTTGGGTTATACCCACTCCCAGACGAGGACACTCATGGACTT i cerAty1.NW_012000820v1 C 0 I 7 s chlSab2.chr14 1476559 216 - 107702431 AGCCTCACGGGATTCTGTCCAGCAGGAAGAGAGGCTGGCTTCAGCCCCTCCCGCCTGACAGCGCATGGGTCCTGCCTCGCCTGGGAGGAGGAGCCCAGGATTGGAGGCAGGGGCTGCTCCCGCCTCCAGAGGTTTCCAGGAGGCCACATGTTGTGCCCTGCCGGCATCCACGCATTTGGGTTATACCCACTCCCAGACGAGGACACTCATGGACTT i chlSab2.chr14 C 0 I 7 s manLeu1.NW_012103754v1 959982 216 - 2200435 AGCCTCACGGGATTCTGTCCAGCGGGAAGAGAGGCCGGCTTCAGCCCCTCCCGCCTGACAGCGCATGGCTCCTGCCTCGCCTGGGAGGAGGAGCCCAGGATTGGAGGCAGGGGCTGCTCCCGCCTCCAGAGGTTTCCAGGAGGCCACATGTTGTGCCCTGCCGGCATCCACGCATTTGGGTTATACCCACTCCCAGACGAGGACACTCATGGACTT i manLeu1.NW_012103754v1 C 0 I 7 s colAng1.NW_012118821v1 1396902 216 - 13651311 AGCCTCACGGGATTCTGTCCAGCAGGAAGAGAGGCCGGCTTCAGCCCCTCCCGCCTGACAGCGCATGGGTCCTGCCTTGCCTGGGAGGAGGAGCCCAGGATTGGAGGCAGGGGCTGCTCCCGCCTCCAGAGGTTTCCAGGAGGCTGCATGTTGTGCCCTGCCGGCATCCACACATTTGGGCTATACCCACTCCCAGATGAGGACACTCATGGACTC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1394102 212 - 108792865 CGCCACATAGGATCGTGTCCAGCAGGAAGAGAGGCCAGCTTCAGCCCCTCCTGTCTGACAGCGGA-GGGTCTCACCTCACCTGGGGGGAG---CCTGGGATTGGAGACAGGGGCTGCTTCTGCCTCCAGAGGTTTCCAGGAGGCGGCATGCTGTGCCCTGCCTGCAGCCACGCATTTGTGTTGTACCCGCTCACAGACGTGGACACTCAGGGACTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1235956 213 - 7082604 AGCCACACAGGATCGTGTCCAGCAGGAAGAGAGGCCGGCTTCAGCCCCTCCTGTCTGACAGGGCAGGGGCCCCACCTCACCTGGGAGGAG---CCCGGGATTGCAGACAAGGGCTGCTTCTGCCTCCAGAGGTTTCCAGGAGGCGGCATGCTGTGCCCTGCCTGCAGCCACGTATTTGTGTGGTACCTGCTCACAGATGTGGACACTCATGGACTC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 118836 211 + 287728 AGCCACACAGGGTCCTGTCCAGCAGGAAGAGAGGCCGGCTTCAGCCCCTCCTGTCTGACAGTGCAGGGGTCCCACCTCACCTGGGAGGAG---CCCGGGATTGGAGAC--GGGCCACTTCTGCCTCCAGAGGTTTCCAGGAGGCGGCATGCTGTGCCCTGCCTGCAGCCGTGCATTTGTGTTGTACCTGCTCACAGACGTGGACACTCATGGACTC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724990 4246 + 4416731 I a score=122014.000000 s hg38.chr2_KI270774v1_alt 130742 49 + 223625 CCTCCGGCCTCGCGTGGGAGCCGAGCCTGTGGTCTGCATCTCGCTGTG-C s panTro5.chr2A 1418473 49 + 111504155 CCTCCGGCCTCGCGTGGGAGCCGAGCCCGTGGTCTGCATCTCGCTGTG-C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1367511 49 + 114371477 CCTCCGGCCTCGCGTGGGAGCCGAGCCCGTGGTCTGCATCTCGCTGTG-C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1392086 49 + 1464242 CCTCCAGCCTCGCGTGGGAGCCGAGCCTGTGGTCTGCATCTCACTGTG-C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1114985 49 + 81552678 CCTCCGGCCTCGCGTGGGAGCCGGGCCTGTGGTCTGCATCTCACTGTG-C i nomLeu3.chr19 C 0 C 0 s colAng1.NW_012118821v1 1397118 49 - 13651311 CCTCTGGCCGCACATGGAAGCCGGGCCTGTGGTCTGCATCTCGCCACG-C i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1394314 48 - 108792865 CCTCCGGTCACACATGGAAGCCAGGCCTGTGGTCTGCATCTTCCCGGG-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1236169 49 - 7082604 CCTCCAGCCACGCATGGAAGCCAGGCCTGTGGTCTGCATCTTGCTGGGT- i saiBol1.JH378218 C 0 I 463 s aotNan1.NW_018513311v1 119047 48 + 287728 CCTCCAGCCACGCATGGAAGCCAGGCCTGTGGTCTGCATCTTCCTGGG-- i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724990 4246 + 4416731 I e manLeu1.NW_012103754v1 960198 7 - 2200435 I e chlSab2.chr14 1476775 7 - 107702431 I e cerAty1.NW_012000820v1 1400087 7 - 10304083 I e macNem1.NW_012011978v1 1445829 7 + 3644372 I e macFas5.chr13 1417921 7 - 111193037 I e rheMac8.chr13 1445487 7 + 108979918 I a score=426729.000000 s hg38.chr2_KI270774v1_alt 130791 169 + 223625 TCCACGCAGCTCCTGCATGCAGCTCCTGCACGCATCGGCTGGGCTCGCAGATGTCAGGTCCGCCTCCTTTCCTCTTCCCTGAGCCTCTGCCGAGCCCTCCC--GACCCGAGGGTCGGCTGCTCCCTTCCCCGCCTGAGTCACTTCCGTGACtctcttcatcctcagagcca s panTro5.chr2A 1418522 169 + 111504155 TCCACGCAGCTCCTGCACGCAGCTCCTGCACGCATCGGCTGGGCTCGCAGATGTCAGGTCCGCCTCCTTTCCTCTTCCCTGAGCCTCTGCCGAGCCCTCCC--GACCCGAGGGTCGGCTGCTCCCTTCCTCGCCTGAGTCAATTCCGTGACtctcttcatcctcagagcca i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1367560 169 + 114371477 TCCACGCAGCTCCTGCACGCAGCTCCTGCACGCATCGGCTGGGCTCGCAGATGTCAGGTCCGCCTCCTTTCCTCTTCCCTGAGCCTCTGCCGAGCCCTCCC--GACCCGAGGGTCGGctgctcccttcctcgcctgagtcacttccgtgactctcttcatcctcagagcca i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1392135 155 + 1464242 TCCAC-------------GCAGCTCCTGCACGCATCGGCTGGGCTCGCAGATGTCAGGTCCGCCTCCTTTCCTCTTCCCTGAGCCTCTGCCGAGCCCTCCC--GACCC-AGGGTCGGctgctcccttcctcgcctgagtcacttccgtgactcgcttcatcctcagagcca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1115034 155 + 81552678 TCCAC-------------GCAGCTCCTGCACGCCTCGGCTGGGCTCGCAGATGTCA-GTCCACCTCCTTTCCTCTTCCCTGAGCCTCTGCCCAGCCCTCCT--GACCCGAGGGTCGGCTGCTCCCTTCCCTGCCTGAGTCACTTCCGTGACtcgcttcatcctcagagcca i nomLeu3.chr19 C 0 C 0 s colAng1.NW_012118821v1 1397167 156 - 13651311 TCCAC-------------ACAGCTCCTGCACGCATCGGCTGGGCTCGCAGATGTCATGTCCACCTCCTTTCCTCTTCCCTGAGCCTCTGCTGAGCCCTCCC--GACCCAAGGGTCGGCTGGTTCCTTCCCCGCCAGGGTCACTTCCATGACTGGcttcatcctcagagcct i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1394362 156 - 108792865 TCCAC-------------GTGGCTCCTGCATGCGTCGACTGGGCTCGAAGATGTCACGCCCACCTCCTTTCCTCTTCCCTGAGCCTCTGCTGAGCCCTCCTGTGACCGGAGGGTCAGTGGCTCCCTTCCCCGCC--CGTCACTTCCATGACCcgcttcatcctcagaacct i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1236681 158 - 7082604 TCCAC-------------GTGGCTCCGGCGTGCATCAGCTGGGCTCGCAAACATCACGCCTGCCTCCTTTCCTCTTCCCTGAGCCTCTACTGAGCTCTCTCGTGACCCGAGGGTCGGCGACTCCCTTCCCCACCAGAGTCACTTCTGTGACtcgcttcagcctcagagcct i saiBol1.JH378218 I 463 C 0 s aotNan1.NW_018513311v1 119095 158 + 287728 TCCAC-------------GCGGCTCCTGCACGCATCGGCTGGGCTCACAGACATCACACCCACCTCCTTTCCTCTTCCCTGAGCCTCTGCTGAGCCCTCCCGTGACCTGAGGGTCAGCGGCTCCCTTCCCCGCCCGAGTCACTTCCGTGACTGGcttcatcctcagagcct i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1724990 4246 + 4416731 I e manLeu1.NW_012103754v1 960198 7 - 2200435 I e chlSab2.chr14 1476775 7 - 107702431 I e cerAty1.NW_012000820v1 1400087 7 - 10304083 I e macNem1.NW_012011978v1 1445829 7 + 3644372 I e macFas5.chr13 1417921 7 - 111193037 I e rheMac8.chr13 1445487 7 + 108979918 I a score=302446.000000 s hg38.chr2_KI270774v1_alt 130960 108 + 223625 tccccttcctcatctgtaatgtgggaagaacacccacctcgcagggttgttTCTGGTTGAAAGGCAGCACTTGTCAGGCTCCTTGCACGCTGTCCACAGCC-GGCCATC s panTro5.chr2A 1418691 108 + 111504155 tccccttcctcatctgtaatgtgggaagaacacccacctcgcagggttgttTCTGGTTGAAAGGCAGCACTTGTCAGGCTCCTTGCACGCTGTCCACAGCC-GGCCATC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1367729 108 + 114371477 tccccttcctcatctgtaatgtgggaagaacacccacctcgcagggttgttTCTGGTTGAAAGGCAGCACTTGTCAGGCTCCTTGCACGCTGTCCACAGCC-GGCCATC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1392290 108 + 1464242 tccccttcctcatctgtaatgtgggaagaacacccacctcgccgggttgtttttgattgaaaggcagcacttgtcaggctccttgcacgctgtcCACAGCC-GGCCATC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1115189 108 + 81552678 tccccttcctcatctgtaatgtgggaagaacacccacctcgcaaggttgttTTTGGTTGAAAGGCAGCACTTGTCAGGCTCCCCGCACGCCGTCCACAGCC-GGCCATC i nomLeu3.chr19 C 0 C 0 s colAng1.NW_012118821v1 1397323 108 - 13651311 tccccttcctcatctgtaatgtgggaagtattcccaccgcacagggctgtttttggttaaaaggtagcacttgtcaggctccttgcacGCCATCCACAGCC-GGACATC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1394518 92 - 108792865 tgcctttcc-catctgtaac-tgggaagaatacccacctgggagggttgttttgGTTTGAA--------------AGGCTCCTTGCACACTGCCCACAGCC-AGGCATC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1236839 107 - 7082604 tccctttcctcgtctgtaac-tgggaagaatacccacctgggagggttgttttggtctgaaaagcagcacttgtcaggctccttgcacgctgcccacacCT-GGGCATC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 119253 107 + 287728 tccccttcctcatctgtaac-tgggaagaatacccacctgggagggctgtttgggtttgaaaggcagcacttgtcaggctccttgcacgccgcccacagCC-GGGCATC i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1729236 108 + 4416731 tctatttccatgtccatgaaatgggaataatacttaccttgcaagattgttgtt-tttgagagataatatttataacactccttgcaTTTAGTTTACAACCAAAATATA i dasNov3.JH576208 I 4246 C 0 e mm10.chr12 90012667 4076 - 120129022 I e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e manLeu1.NW_012103754v1 960198 7 - 2200435 I e chlSab2.chr14 1476775 7 - 107702431 I e cerAty1.NW_012000820v1 1400087 7 - 10304083 I e macNem1.NW_012011978v1 1445829 7 + 3644372 I e macFas5.chr13 1417921 7 - 111193037 I e rheMac8.chr13 1445487 7 + 108979918 I a score=2008550.000000 s hg38.chr2_KI270774v1_alt 131068 713 + 223625 GTAAGAGTTACGGCGACTGTCACCTCTCAGCCACTCCTCGGCATC-GGACCTCTTGGCTCCTGGCCATGGCATTGA-CCACAGAATGTCATAAA--CAGCCCAGTGTG-TTTTTCCACGAGAGCAGTGGTCGGAGGCTCCTGCAGGTAAATGGCTGGAGAT-TGATTGACATGGGAATATCACGGCATCACAGAATCAGAGCACATTTGTTCACGGTGCAGGAATAACATCAAGTGAGTGGTGAGCTCTAAAG-GACCTG--G-CCCTCG--AGGTAGCTCACACCCTCG-ATGATGGATGGAGCCAGGCCACAGGTGAAATTTCCATCCAGGCGGG---ACAGACTCAAGCCGGGACTGGGTTCCCCTGACGCCC-GGCTTCCCAAATGTGC-TTCCCTCCCGGATGCACAGAGAACGAACGTGGCATGGACATTGTGAGCTGCAGGAAGCG-ATCCCACCAGGGATCAAAAAGCCAACTTCCTCCA--GCGGCCATTCTGCACTAAGCCTCTTTCGTGGAGTTCACGTTC--TGTCCAATACAGCCTTAAAGC---CCATGAACAATTCT--GGGGGAGACGATCAGGTCTGAAAGGAAAATTCCATATGGGTATTTAAGTTATTGGAAGAACCCTTAAGATCTACCTGGGTTTAACATAGAATTTGCTATATGTAACTTGGTATATCATTCTCTATAGTCATTTGCCTAAAAATCATCAAAAGTATAAATTCAATGTT s panTro5.chr2A 1418799 712 + 111504155 GTAAGAGTTACGGCGACTGTCACCTCTCAGCCACTCCTCGGCATC-GGACCTCTTGGCTCCTGGCCATGGCATTGA-CCACAGAATGTCATAAA--CAGCCCAGTGTG-TTTTTCCACGAGAGCAGTGGTCGGAGGCTCCTGCAGGTAAATGGCTGGAGAT-TGATTGACGTGGGAATATCACGGCATCGCAGAATCAGAGCACGTTTGTTCATGGTGCAGGAA---CATCAAGCGAGTGGTGAGCTCTAAAG-GACCTG--G-CCCTCG--AGGTAGCTCACACCCTCG-ATGATGGATGGAGCCAGGCCACAGGTGAAATTTCCATCCAGGCGGG---ACAGACTCAAGCCGGGACTGGGTTCCCCTGACGCCC-AGCTTGCCAAATGTGC-TTCCCTCCCGGATGCACAGAGAACGAACGTGGCGTGGACATTGTGAGCTGCAGGAAGCG-ATCCCACCAGGGATCAAAAAGCCAACTTCCTCCACAGAGGCCATTCTGCACCAAGCCTCTTTCATGGAATTCATGTTC--TGTCCAATGCAGCCTTAAAGC---CCATGAACAATTCT--GGGGGAGACGATCAGGTCTGAAAGGAAAATTCCATATAGGTATTTAAGTTATTGGAAGAAACCTTAAGATCTACCTGGGTTTAACATAGAATTTGCTATATGTAACTTGCTATATCATTCTCTATAGTCATTTGCCTAAAAATCATCAAAAATATAAATTCAATGTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1367837 712 + 114371477 GTAAGAGTTACGGCGACTGTCACCTCTCAGCCACTCCTCGGCATT-GGACCTCTTGGCTCCTGGCCATGGCATTGA-CCACAGAATGTCATAAA--CAGCCCAGTGTG-TTTTTCCACGAGAGCAGTGGTCGGAGGCTCCTGCAGGTAAATGGCTGGAGAT-TGATTGACGTGGGAATATCACGGCATCGCAGAATCAGAGCACGTTTGTTCATGGTGCAGGAA---CATCAAGCGAGTGGTGAGCTCTAAAG-GACCTG--G-CCCTCG--AGGTAGCTCACACCCTCG-ATGATGGATGGAGCCAGGCCACAGGTGAAATTTCCATCCAGGCGGG---ACAGACTCAAGCCGGGACTGGGTTCCCCTGACGCCC-AGCTTGCCAAATGTGC-TTCCCTCCCGGATGCACAGAGAACGAACGTGGCGTGGACATTGTGAGCTGCAGGAAGCG-ATCCCACCAGGGATCAAAAAGCCAACTTCCTCCACAGAGGCCATTCTGCACCAAGCCTCTTTCATGGAATTCATGTTC--TGTCCAATGCAGCCTTAAAGC---CCATGAACAATTCT--GGGGGAGACGATCAGGTCTGAAAGGAAAATTCCATATAGGTATTTAAGTTATTGGAAGAAACCTTAAGATCTACCTGGGTTTAACATAGAATTTGCTATATGTAACTTGCTATATCATTCTCTATAGTCATTTGCCTAAAAATCATCAAAAATATAAATTCAATGTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1392398 714 + 1464242 GTAAGAGTTACGGCGACTGTCACCTCTCAGCCACTCCTCGGCATC-GGACCTCTTGGCTCCTGGACATGGCATTGA-CCACAGAATGTCATGAA--CAGCCCAGTGTG-TTTTTCCACGAGAGCAGCGGTCGGAGGCTCCTGCAGGTAAATGGCTGGAGAT-TGATTGACGTGGGAATATCACGGCATCACAGAATCAGAGCACGTTTGTTCATGGGGCAGGAACAACATCAAGCGAGTGGTGAGCTCTAAAG-G-CCTG--G-CCCGCG--AGGTAGCTCACACCCTCG-ATGATGGGTGGATCCAGGTCACAGGTGAAATTTCCATCCAGGCGGG---ACAGACTCAAGCCGGGACTGGGTTCCCCTGACGCCC-GGCTTGCCAAATGTGC-TTCCCTCCTGGATGCACAGAGAACGAACGTGGCGTGGACATTGTGAGCTGCAGGAAGCG-ATCCCACCAGGGATCAAAAAGCCAACTTCCTCCACAGCGGCCATTCTGCACTAAGCCTCTTTCATGGAGTTCACGTTC--TGTCCAATACAGCCTTAAAGC---CCATGAATAATTCT--GGGGGACACGATCAGGTCTGAATGGAAAATTCCATATAGGTATTTAAGTTATTGGAAGAACCCTTAAGATCTACCTGGGTTTAACATAGAATTTGCTATATGTAACTTGGTATATCATTCTCTATAGTCATTTGCCTAAAAATCATCAAAAATATAAATTCAATGTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1115297 715 + 81552678 GTAAGAGTTACGGCGACTGTCACCTCTCAGCCACTCCTCAGCATC-GGACCTCTTGGCTCCTGGCCATGGCATTGA-CCACAGAATGTCGTAAA--CAGCCCAGTGTG-TTTTTCCATGAGAGCAGTGGTCGGAGGCTCCTGCAGGTAAATGGCTGGAGAT-TGATTGACGTGGGAATATCACGGCATCACCGAATCAGAGCACATTTTTTCATGGCGCAGGAGCAACATCAAGTGTGTGGTGAGCTCTAAAG-GACCTG--G-CCCTCG--AGGTAGCTCACACCCTCG-ATGATGAATGGAGCCAGGTCACAGGTGAAATTTCCATCCAGGCGGG---ACAGACTCAAGCTGGGACTGGGTTCCCCTGGCGCCC-GGCTTGCCAAATGTGC-TTCCCTCCTGGATGCACAGAGAACGAACGTGGCGTGGACATTGTGGGCTGCAGGAAGCG-ATCCCACCAGGGATCAAAGAGCCAACTTCCTTCACAGCGGCCATTCTGCACTAAGCCTCTTTCATGGAGTTCGTGTTC--TGTCCAATACAGCCTTAAAGC---CCATGACCAATTCTTGGGGGGAGACGATCACATTTGAAAGGAAAATTCCATATAGCTATTTAAGTTATTGGAAGAACCCTTAAGATCTACCTGGGTTTAACAT--AATTTGCTATATATAACTTGGTATATCATTCTCTATAGTCATTTGCCTAAAAATAATCAAAAATATAAATTCAATGTT i nomLeu3.chr19 C 0 C 0 s colAng1.NW_012118821v1 1397431 712 - 13651311 GTAAGAGTTATGGTGACTGTCACTTTTCAGCCACTCCTCAGCCTC-GGACCTCTGGGCTCCTGGCCATGGTATTGA-CCACAGAATGTTATAAA--CAGCCCAATGTG-TTTTTTTACGAGAGCAGTTGTTGAAGCCTCCTGCAATTAAATGATTGGAGAT-TGATTGACTTGGGAATATCACCACATCACAGAATCAGAGCAAACTTTTTCACGGCGCAGGAACAACATCAACTGAGTGGTGAGTTCTGAAG-GACCTG--GCCCCTCA--AGGTAGCGCACACCCTCG-ATGATGGGTGGAGCCAGGTCACAGGTGAAATTTCCATCCAGGCGGG---ACAGACTCAAGCTGGGACTGGGTTCCCCTGACG-CC-GGCTTGCCAAACGTGC-TTCCCTCCTGGATGCACAGAGAACGAAGGTGGCGTAGACACTGTGAGCTGCAGGAAGCG-ATCCCACCAGGGATGACAAAGCCAACTTCCTTCATTGCAGCAATTCCGCACTGAGCCGCTTTCACGGGGTTCATGCTC--TGTCCCATACAGCCTTAAAGC---CCATGAACG---TG--GGAGGAGACGACCACGTCTGAAAGGAAAATTCCATATAGGCATGTAAGTTATTGGAAGAACCCTTAAGATCTACCTGGGTTTAACATATAATTTGCTACATATAACTTGGTATATCATTCTCTATAGTCATTTGCCTACAAATAATCAAAAATATAAATTCAATGTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1394610 711 - 108792865 GTAAGAGTTACGGCGACTGTCACC-CTCAGCCACTCCTCAGCATC-GGA-CTCCTGGCTCCTGGCCGTGGTGTTGA-CCACAGAATGTCATAAA--CAGTCCAATGTGCTTTTTCCATGAGAGCAGTTGTTGAAGGCATCTGCAATGCAATGGCTGGAAAC-GGACTGATCTGGGAATATCGCTGCACCACGGAGTTAGAGCAAATGTTTTCACGGCTCAGGAAAAGCATCGCGTGAGTGGTGACCTCTCAAG-GTGCTG--G-CCCTGG--AGGTCACTCACACCCTCA-ATGACAGATGGAACCAGGTCACTGAGGAAATTTCCATCCAGCCAGG---ACAGACTCCAGCCGGGACTTGGTTCCCCTGAAGCCC-GGCTCGCCCAAAGTGC-CTCCCTCCTGGATGCACAGAGAAC----GTGGCACGGATGCTGTGGGCTGCAGGAACCA-CTCCCACCAGGGACCACAAAGCCACCTTCATTCACAGTGGCAATCCTGCACTAAGCCTCTTCCATGCAGCTCACGTCC--TGCCCAGTACAGCCTGAAATTTCACCATGAACAGTTCT-GGGCAGAAGTGATCAAGTCTGAAGGGAAAAGGTGATATATGCATGTAAGTTATTGCAAGAACCCTTAAGATTTACCT-GGTTTAATATATAATTTGCTATA--TAACTTGGTACATAATTCTCTGTAGTCATTTGCCTGAAAATAATCAAAAGCACACATTAAATGTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1236946 701 - 7082604 GT-AGAATTATGGTGACTGTCACC-CTCAGCTACTCCTCAGCATC-GGA-CTCCTGGCTCCTGGCCGTGGCATTGA-CCACAGAATGTCATAAA--CAGTCCAATGTGCTTTTTCCATGAGAGCAGTTGTTGAAGGCTCCTGCAACGAAATGGCTGGAAAC-GGACTGATCTGGGAATATCACTGCACCACAGAGTTAGAGCAAATGTCTTCACGGCTCAGGAAAAGCATTGAGTGAGTGGTGAGCTCTAAAG-GAGCTG--G-CCCTGG--AGGTCACTTACACCCTCG-ATGACAGATGGAACCAGGTCACTGATGAAATTTCCATCCAGCCGGG---ACAGACTCCGGCTGGCACTTGGTTTCCCCGAAGCCC-GGCT---------TGC-CTCCCTGCTGGACGCACAGAGAAC----GTGGCACGGATGCTGTGGGCTGCAGGAAGCG-ATCCCACCAGGGACCACAAAGCCACCTTCATTCACAGTGGCAATCCTGCACTAAGCCTCTTCCATGCAGCTCACGGCC--TGCCCAGCATAGCCTGAAATTTCACCATGAGCAGTTCT-GGGGGGAAGTGATCAACGCTGAAGGGAAAATTTGATATATGCATGTAAGTTATTGGAAGAACCCTTAAGATTTACCTGGGTTTAATATATAATTTGCTATA--TAACTTGGTATATAATTCTCTATAGTCATTTGCCT-AAAATAATAAAAAATACACATTAAATGTT i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 119360 712 + 287728 GTAAGAGTTACGGCGACTGTCACC-CTCAGCCACTCCTCAGCATC-GGA-CTCCTGGCTCCTGGCCGTGGCATTGA-CCACAGAATGTCATAAA--CAGTCCAATGTGCTTTTTCCATGAGAGCAGTTGTTGAAGGCTCCTGCAATGTAATGGCTGGAAAC-GGACTGATCTGGGAATATCACTGCACCACAGAGTTAGAGCAAATGTTTTCACGGCTCAGGAAAAGCACTGAGTGAGTGGTGAGCTCTGAAG-GAGCTG--G-CTCTGG--AGGTCACTCACACCCTCG-ATGCCAGATGGAGCCAGGTCACTGATGAAAGTTCCATCCAGCCAGG---ACCGACTCCAGCCGGGACTTGGTTCCCCTGAAGCCC-GGCTCGCCAAATGTGC-CTCCTTCCTGGACGCACAGAGAAC----GTGGCACGGATGCTGTGGGCTGCAGGAAGCG-ATCCCACCGGGGACCACAAAGCCACCTTCATTCACAGTGGCAATCCTGCAGTAAGCCTCTTCCATGCAGCTCACGTCC--TGCCCAGTACAGCCTGAAATTTCACCATGAACAGTTCT-CGGGGGAAGTGGTCAAGTCTGAAGGAAAAATTTGATATATGCATGTAAGTTATTGGAAGAACCCTTAAGATTTACCTGGGTTTAATATATAATTTGCTATG--TAACTTGGTATATAATTCTCTATAGTCGTTTCCCTAAAAATAATCAAAAATACACATTAAATGTT i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90016743 596 - 120129022 GTGATAATTGCTATGTCTGTCACCATAAAGTGACTCTTCTGCATC-TAAATTCTTTGTTCTTTGCCCCAGACTAGAGCCTTAGAATGT---------AACTCACCATGCTTTTCCAAGGAGAACAATTCTGGAAGGCTCTCACAG----AAAGCAGGTGACATGCCTGTTCTCAGAGTATTCCTGCATCTCAGAGTTAAAGCAGGCTTTTC---------------------AGCCTGTGGAAAGCCCTAATGTGTCCTGATG-ACCTTG--TGGT----------CTTA-TTACTG-------CCTTACCACAGTTG--------ACTCAGGGGAG---TCTAACCTTAGCCCAAAT---------------------------AATCGTGC-CTCCCACTCAAAGACA--------------GACATG--TGTCATGGTCTGCAGAGGACGAATCCTACTGAGGACCAGCATGCCAGCTTCTTCCCTGCAGGCTAATCTGTACTCACTCCTCTTCCTGAGGGACAC-TTC--TGTGTAATCGAGTCTAAAGAC---ATAGAAATAATTCC-TAGGGGAAATGGCAGACTCTGAAACAGAAATGTAATTGTTGTGTTTCTGTTTCCAGAAGAACTCCCAA-CTCCATCTG-----CACACGGAATG---------CAATTTGTTATAGAGGTTTCTATAGTCATTC-CCTGATAGT-----------TAAATGAAACTTG i mm10.chr12 I 4076 C 0 s dasNov3.JH576208 1729344 694 + 4416731 AAAAGTGTTAAAATGATCGCCTTCATGAAATTACTGATCAATATCTAGAACTCTTGGTTGTTTGCC-CAAAGCTGC-AGTCACACTGTTGTAAAGGAAATTCAATGTGATTTTTCCATGACAGTCATTGCTGAGCGCTCCAACAATTAAATAGCTGTGACT-TGATTGATTTTCAGATATGACTGCATCTCAAAATTATAGCAGAATTTTTCATTGCTCAGGCAAAATATAAAGTTAATGATAAGCTGTGATG-AAACTG--G-CCCTCTTCTATTTTCTTACAACCTCATTTGATGGATGGA----GATTACAAATGAAATTTCCATCCAGATAGTAACACAGACTCAACCCATTACTGGATTCATCTAACACCCAGGCTTGCCAAATGTGTATTTTTTCATGGGTATACAGAGAAA----ATTGAATCACTATTACAAGCTATACAGCATG-ATCCT-------ATCAACGGGCCAATTTCCTTTCCCGTGATAATTCTTTACTAAACTTCTTTCTTGGGGGACAATTTCTATGTCATTTATAATAGCAAACC---CCATAA---GTTCA-TAAAGCAAATGACAAACTCTGAAAGTAACAATTAGTATATGCATTTAAATTATAGACAGGACCC---AAATCTACCTGGGTCTAGCATA--------------TAATGTGGTATATAATTCTCTATATATTTTTATCAAAAAATAGTCAAAAACCATAATTAACTATT i dasNov3.JH576208 C 0 I 531 e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e manLeu1.NW_012103754v1 960198 7 - 2200435 I e chlSab2.chr14 1476775 7 - 107702431 I e cerAty1.NW_012000820v1 1400087 7 - 10304083 I e macNem1.NW_012011978v1 1445829 7 + 3644372 I e macFas5.chr13 1417921 7 - 111193037 I e rheMac8.chr13 1445487 7 + 108979918 I a score=20632.000000 s hg38.chr2_KI270774v1_alt 131781 9 + 223625 GCATCTCCC s panTro5.chr2A 1419511 9 + 111504155 TCATCTCCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1368549 9 + 114371477 GCATCTCCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1393112 9 + 1464242 GCATCTCCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1116012 9 + 81552678 GCATCTCCC i nomLeu3.chr19 C 0 C 0 s colAng1.NW_012118821v1 1398143 9 - 13651311 GCATCTCCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1395321 9 - 108792865 GGCTCTCCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1237647 9 - 7082604 GTATCTCCC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 120072 9 + 287728 GGATCTCCC i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90017339 9 - 120129022 GAGTTTGGT i mm10.chr12 C 0 C 0 e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1730038 531 + 4416731 I e manLeu1.NW_012103754v1 960198 7 - 2200435 I e chlSab2.chr14 1476775 7 - 107702431 I e cerAty1.NW_012000820v1 1400087 7 - 10304083 I e macNem1.NW_012011978v1 1445829 7 + 3644372 I e macFas5.chr13 1417921 7 - 111193037 I e rheMac8.chr13 1445487 7 + 108979918 I a score=1170620.000000 s hg38.chr2_KI270774v1_alt 131790 420 + 223625 ATCCAGATATTTTGTGTTAAAAACACCTCATATCT----------GATGTCTGACAGC----------------------------------------------------------------TATTTTCT------------------------TTTTTTCAATGTATTTGCCT--TGAATTCACATTCGTAGTCACCTT-ttttccctctcactttgtttttcatttgcattttTACCTAATTCATGAAATTATCCAGCAGGG-AGAGACCTGATGGAGTTTTGCTGGAATGAAGCTCCTTGACACAATCGTCTCCTTTTTAGAAGTGCCTGTAGATTGAAAGTTCAATTGCTCAAAACAG---T--TTGCTAAAGAACAAATGTGTGTCTATTAAGAGTTTAAGTTGCACTTGTAAATCCACCAATGGCACTAAGATATCATTTAGCAATATTGACACTTGAAGTGAT------AAA--AA---AACAG---------------AA-----------------AATACCTTTGA-C-GTCAAATAAATGTATT--AGTCTTTAAGAAAAAAA s panTro5.chr2A 1419520 419 + 111504155 ATCCAGATATTTTGTGTTAAAAACACCTCATATCT----------GATGTCTGACAGC----------------------------------------------------------------TATTTTCT------------------------TTTTT-CTATGTATTTGCCT--TGAATTCACATTCATAGTCACCTT-ttttccctctcactttgtttttcatttgcattttGACCTAATTCATGAAATTATCCAGCAGGG-AGAGACCTGATGGAGTTTTGCTGGAATGAAGCTCCTTGACACAATCGTCTCCTTTTTAGAAGTGCCTGTAGATTGAAAGTTCAATTGCTCAAAACAG---T--TTGCTAAAGAACAAATGTGTGTCTATTAAGAGTTTAAGTTGCACTTGTAAATCCACCAATGGCACTAAGATATCATTTAGCAATATTGACACTTGAAGTGAT------AAA--AA---AACAG---------------AA-----------------AATACCTTTGA-C-GTCAAATAAATGTATT--AGTCTTTAAGAAAAAAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1368558 419 + 114371477 ATCCAGATATTTTGTGTTAAAAACACCTCATATCT----------GATGTCTGACAGC----------------------------------------------------------------TATTTTCT------------------------TTTTT-CTATGTATTTGCCT--TGAATTCACATTCATAGTCACCTT-ttttccctctcactttgtttttcatttgcattttGACCTAATTCATGAAATTATCCAGCAGGG-AGAGACCTGATGGAGTTTTGCTGGAATGAAGCTCCTTGACACAATCGTCTCCTTTTTAGAAGTGCCTGTAGATTGAAAGTTCAATTGCTCAAAACAG---T--TTGCTAAAGAACAAATGTGTGTCTATTAAGAGTTTAAGTTGCACTTGTAAATCCACCAATGGCACTAAGATATCATTTAGCAATATTGACACTTGAAGTGAT------AAA--AA---AACAG---------------AA-----------------AATACCTTTGA-C-GTCAAATAAATGTATT--AGTCTTTAAGAAAAAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1393121 421 + 1464242 ATCCAGATATTTTGTGTTAAAAACACCTCATATCT----------GATGTCTGACAGC----------------------------------------------------------------TATTTTCT------------------------TTTTTTCTATGTATTTGCCT--TGAATTCACATTCATAGTCACCTT-ttttccctctcactttgtttttcatttgcattttGACCTAATTCATGAAATTATCCAGCAGGG-ACAGACCTGATGGAGTTTTGCTGGAATGAAGCTCCTTGACACAATCGTCTCCTTTTTAGAAGTGCCTGTAGATTGAAAGTTCAATTGCTCAAAACAG---T--TTGCTAAAGAACAAATGTGTGTCTATTAAGAGTTTAAGTTGCACTTGTAAATCCACCAATGGCACTAAGATATCATTTAGCAATATTGACACTTGAAGTGAT-----AAAA--AA---AACAG---------------AA-----------------AATACCTTTGA-C-GTCAAATAAATGTATT--AGTCTTTAAGAAAAAAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1116021 420 + 81552678 ATCCAGATATTTTGTGTTAAGAACACCTCATATCT----------GATGTCTGACAGC----------------------------------------------------------------TATTTTCT------------------------TTTTCTCTACGTATTTGCCT--TGAATTCACATTCATAGTCACCTT-ttttccctctcactttgtttttcatttgcattttGACCTAATTCATGAAATTATCCAGCAGGG-TGAGACCTGATGGAGTTTTGCTGGAATGAAACTCCTTGACACAATCATCTCCTTTTTAGAAGTGCCTGTAGATTGAAAGTTCAATTGCTCGAAACAG---T--TTGCTAAATGACAAATGTGTGTCTATTAAGAGTTTAATTTGAACTTGTAAATCCATCAATGGCACTAAGATATCATTTAGCAATATTGACACTTGAAGTGAG------AAA--AA---AACAG---------------AA-----------------AATACCTTTGA-C-CTCAAATAAATGTTTT--AGTCCTTAAGAAAAGAA i nomLeu3.chr19 C 0 C 0 s colAng1.NW_012118821v1 1398152 427 - 13651311 ATCCAGATGTTTTATATTAAAAACACCTCATATCT----------GATGTCTGACAGC----------------------------------------------------------------TCTTTTCT------------------------TTTTTTCTACCTATTTGCCT--TGAATTCACATTCATAGTCACCTTGTTTTCCCTCCCACTTTGTTTTTCATTTGCATTTTGACCTAATTTATGAAATTATCCAGCAGGG-TGAGACCTGGTGGAGTTTTGCTGG-ATGCAACTCCTCGACACAATCGTCTCCTTTTAAGAAGTGCCTGTAGATTGAAAGTTCAATTGCTCGAAACGGTTTT--TTACTAAACGACAAA--TGTGTCTATTAAGAGTTTAAGTTGCACTTTTAAATCCATCAGTGGCACTAAGACATCATTTAGCAATATTGACACTTGAAGGGATAAAACAAAA--AA---AACAG---------------AA-----------------AATACCTTTGA-C-CTCAAATAAATGTATT--AGTCTTTAAGGAAAAAA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1395330 410 - 108792865 ATCCAAATACATTGTGTTAGGTACACCTACTA----------------GTCTGACAGC----------------------------------------------------------------TGTTTTCT------------------------TATTTTCTACTTATTTGCCT--TGAAGTCACATTCGTAGTCACCTT-TTTTCCCTCTCACTGGGTTTTTCTTTCACATTCTGACCTAATTTATGAAGTTATTCCGCCAGG-TGAGACCTTCTGGAGTTTTAATGGAATGAAACTCCTTGACACAATCATCT-CGTTTTAGAAGTGCCTACAGACTGAACGTTACCCTGCTTGAAACGG---T--TTGTTAAACAACAAATGTGTGTCTGTTAAGAGTTTAAGTTACACTTTGAAATTCGTAGGTGGCACTAAGAGATCATTTAGCAATATTGACACTTGAAGT--A------AAA--AA---AACAA---------------AA-----------------AGTACCTTTGA-C--TCAAATAAATGTATT--AGTCTTTAAGAAAAAAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1237656 401 - 7082604 ATCCAAATACCTTGTGTTAGGTACACTTACTG----------------GTCTGACAGC----------------------------------------------------------------TGTTTTCT------------------------TTTTTTCTACATATTCACC---TGAAGTCGCATTCATTGTCACC-T-CTTTACCTCTCACTTGGTTTTTCTTTCACATTTTGACCTAATTTATGAAATTATTCCACAGGG-TGAGACCTGATGGAGTGTTACTGGAATGAAACAC---------ATCATCTCCTTTTTAGAAGTGCCTGTAGACTGAAAGTTAAACGGCTTGAAACGG---T--TTGTTAAACAACAAATGTGTGTCTATTAAGAGTTTAAGTTATACTCTGAAATTCGTAGGTGGTACTAAGAGATCATTTAGCAATATTGACACTTGAAGT--A------AAA--AA---AAAAA---------------AA-----------------AATGCCTTTGA-T--TCAAATAAATGTATTA-AATCTTTAAGGACAAAA i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 120081 410 + 287728 ATCCAAATTCATTGCGTTAAGGACACCTACTA----------------GTCTGACAGC----------------------------------------------------------------CGCTTTCT------------------------TTTTTTCTACATATTTGCCT--TGAAGTCACACTCACAGTCAC--T-TTTTCCCTCTCACTTGGTTTTTCTTTCACATTTTGACCTAGTTTATGAAATGATTCCGCAGGG-TGAGACCTTATGGCGTTTTACTGGAATGAAACTCCTTGACACAGTCATCTCCTTTTTAGAAGTACCTATGGACTGAAAGTTAAACTGCTTGAAACGG---T--TGGTTAAACAACAAATGTGTGTCTGTTAAGAGTTTAAGTTACACTTTGAAATTCATAGGTGGCACTAAGAGACCATTTAGCAATATTGACACTTGAAGT-AA------AAA--AA---AACAA---------------GA-----------------AATACCTTTGA-C--TCAAATAAATGTATT--AGTCTTTAAGAAAAAAA i aotNan1.NW_018513311v1 C 0 I 5408 s mm10.chr12 90017348 493 - 120129022 TTCCAAACACATTGTG---AAATAATCGAATTCCT----------GATAACTAACAGTTTCAATTAAGACCATTCCAGAAGGACTAGCTAGCAACAGGTATGACGCTCTGGGGGAGGCCTGGTGATTTCTGGGAATCTACGTGCACAGTAAGTCTTTTCCCCAGATGCATGTCTTCTGGGCACAAATTCACAGGTACCTT-TAGTCCCT---ACT---TTTATCATTTGGGTTTTAACATAATTCATGAAATT----------G-TGATACTTTTTTAAGCTTTCCTGAGAGAAA-----TTAACACACTCATCTCCTTTGGGGGAA-GTCTATGCATTGATAGTTTTGCTGCTTCACACAA---TAGCTGTT-----ACAGACATGAACCCATGCAGAGTCCAAGTCATACTTTAAGATTCAAAAGGG-----AAGATGTCACTTAACAAGGTGCAAACTAGATATTCC------AAATCAA---AACAATCTTCTGGATTATGTGG-----------------GGTATCAGTGAGC-CCCAATCAAACTCATT--AACCTTAAAGGAAAG-- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1730569 444 + 4416731 ATGTAAATATTTTGTGTTA---ACACTAAACATCTTGGTTAATTGGCCATCTGACTACAC--------------------------------------------------------------TGTTTCCT------------------------TTTTTTCAATGTATTTGCCT--TGTAGTCACATTCCTGGTCAATTT-TTTTTCAT---------ATTTTCATTTGTGTTTTGCCCTAATTGATGATATCATTCAGCAGAACTGATATCTTGTGTGGTTTTACCGGAATTTAGCACCTTAACTCAATCGGCTCATTTGAGGAACTATCTATATATTTAAAGTGAAAGTGCTTAAAACAA---TAATTATAAAGCAACAAATATTTACCTTGTTATGCTCTTAAGGGTACTCTAAATTTTAAAGAAAGCACTAAGCTATAATTTAGTAAGATTTTCA-TTCAAGTGAA------GAA--AATTTTACAA---------------AACCAGCCTGAACTATTGTAATCACTGAAA-CTCCCAAGTAAATTTATTAGAGTCTTTAAGGAAAAA- i dasNov3.JH576208 I 531 C 0 e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e manLeu1.NW_012103754v1 960198 7 - 2200435 I e chlSab2.chr14 1476775 7 - 107702431 I e cerAty1.NW_012000820v1 1400087 7 - 10304083 I e macNem1.NW_012011978v1 1445829 7 + 3644372 I e macFas5.chr13 1417921 7 - 111193037 I e rheMac8.chr13 1445487 7 + 108979918 I a score=47056.000000 s hg38.chr2_KI270774v1_alt 132210 14 + 223625 GAGGTGGAATTGAC s panTro5.chr2A 1419939 14 + 111504155 GAGGTGGAATTGAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1368977 14 + 114371477 GAGGTGGAATTGAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1393542 14 + 1464242 GAGGTGGAATTGAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1116441 14 + 81552678 GAGGTGGAATTGAC i nomLeu3.chr19 C 0 C 0 s colAng1.NW_012118821v1 1398579 14 - 13651311 GAGGTGGAATTGCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1395740 14 - 108792865 GAGGTGGAACTGAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1238057 14 - 7082604 GGGGTGGAATTGAC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 125899 14 + 287728 GAGGTGGAGTTGAC i aotNan1.NW_018513311v1 I 5408 C 0 s mm10.chr12 90017841 12 - 120129022 --GGAGAAGTTGGT i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1731013 10 + 4416731 TAGGTGAAAT---- i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e manLeu1.NW_012103754v1 960198 7 - 2200435 I e chlSab2.chr14 1476775 7 - 107702431 I e cerAty1.NW_012000820v1 1400087 7 - 10304083 I e macNem1.NW_012011978v1 1445829 7 + 3644372 I e macFas5.chr13 1417921 7 - 111193037 I e rheMac8.chr13 1445487 7 + 108979918 I a score=468261.000000 s hg38.chr2_KI270774v1_alt 132224 55 + 223625 CTTGGTGTCTTAT-GAAATCGCAGAACATATGATGGGTATAAACGATG-CCAGAATA s panTro5.chr2A 1419953 55 + 111504155 CTTGGTGTCTTAT-GAAATCGCAGAACATATGATGGGTATAAACGATG-CCAGAATA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1368991 55 + 114371477 CTTGGTGTCTTAT-GAAATCGCAGAACATATGATGGGTATAAACGATG-CCAGAATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1393556 55 + 1464242 CTTGGTGTCTTAT-GAAATCGCAGAACATATGATGGGTATAAACGATG-CCAGAATA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1116455 55 + 81552678 CTTGGTGTCTTAG-GAAATCGCAGAACATACGATGGGTATAAACGATG-CCAGAATA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1445494 55 + 108979918 CTTGGTGTCTTAG-GAAATCGCAGAACATACAATGGGTGTAAATGACG-CCAGAATA i rheMac8.chr13 I 7 C 0 s macFas5.chr13 1417928 55 - 111193037 CTTGGTGTCTTAG-GAAATCGCAGAACATACAATGGGTGTAAATGACG-CCAGAATA i macFas5.chr13 I 7 C 0 s macNem1.NW_012011978v1 1445836 55 + 3644372 CTTGGTGTCTTAG-GAAATCGCAGAACATACAATGGGTGTAAATGACG-CCAGAATA i macNem1.NW_012011978v1 I 7 C 0 s cerAty1.NW_012000820v1 1400094 55 - 10304083 CTTGGTGTCTTAG-GAAATCGCAGAACATACAATGGGTATAAACGACG-CCAGAATA i cerAty1.NW_012000820v1 I 7 C 0 s chlSab2.chr14 1476782 55 - 107702431 CTTGATGTCTTAG-GAAATCGCAGAACATACAATGGATATAAACGACG-CCAGAATA i chlSab2.chr14 I 7 C 0 s manLeu1.NW_012103754v1 960205 55 - 2200435 CTTGGTGTCTTAG-GAAATCGCAGAACATACAATGGGTATAAACGACG-CCAGAATA i manLeu1.NW_012103754v1 I 7 C 0 s colAng1.NW_012118821v1 1398593 55 - 13651311 CTTGGCGTCTTAG-GAAATCGCAGAACATACGATGGGTATAAACGACG-CCAGAATA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1395754 56 - 108792865 CTTGATGTCTTAT-GAAATTGCAGAACATACCATGGGTATAAATGACATTCGGAATG i calJac3.chr14 C 0 I 1450 s saiBol1.JH378218 1238071 55 - 7082604 CTTGATGTCTTAC-GAAATTGCAGAACATAGCACAGGTATAAATGACA-CCAGAATG i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 125913 55 + 287728 CTTGATGTCTTAT-GAAATTGCAGAACATACCATGGGTATAAATGACA-CCAGAATG i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90017853 49 - 120129022 GCTGGTATCCGGTAGTACTCTCAGA------CATGGGTAC-AGTGGCT-CCAGAAGA i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1731023 39 + 4416731 -----------------ATTGGGGACCATAATATTGGTTCAAATTATA-CTAGAATA i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I a score=1856398.000000 s hg38.chr2_KI270774v1_alt 132279 222 + 223625 AACAAGATTTTCAAAGTTTTTGGAAAAAGCTGAGCTCATGCCGATTATAGAAAGCATTTGCATCTTTTGAAGGG-TTTTCCTCTGAG-GGTTC---AAATGT---CCCTCAGGGATCATGCTGGTGATAATCCCAGC---TCACA--AACTGACTGGTCTTAATTGCCTTCAATCAAGTAGCTCCAGCAGGAG---------ACGGG---AAAAATCACCGCTGAGTTTCC-------TCATACTTCTGGCCAC- s panTro5.chr2A 1420008 222 + 111504155 AACAAGATTTTCAAAGTTTTTGGAAAAAGCTGAGCTCATGCTGATTATAGAAAGCATTTGCATCTTTTGAAGGG-TTTTCCTCTGAG-GGTTC---AAATGT---CCCTCAGGGATCATGCTGGTGATAATCCCAGC---TCACA--AACTGACTGGTCTTAATTGCCTTCAATCAAGTAGCTCCAGCAGGAG---------ACGGG---AAAAATCACCGCTGAGTTTCC-------TCATACTTCTGGCCAC- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1369046 222 + 114371477 AACAAGATTTTCAAAGTTTTTGGAAAAAGCTGAGCTCATGCTGATTATAGAAAGCATTTGCATCTTTTGAAGGG-TTTTCCTCTGAG-GGTTC---AAATGT---CCCTCAGGGATCATGCTGGTGATAATCCCAGC---TCACA--AACTGACTGGTCTTAATTGCCTTCAATCAAGTAGCTCCAGCAGGAG---------ACGGG---AAAAATCACCGCTGAGTTTCC-------TCATACTTCTGGCCAC- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1393611 222 + 1464242 AACAAGATTTTCAAAGTTTTTGGAAAAAGCTGAGCTCATGCCGATTATAGAAAGCATTTGCATCTTTTGAAGGG-TTTTCCTCTGCG-GGTTC---AAATGT---CCCTCAGGGATCATGCTGGTGATAATCCCAGC---TCACA--AACTGACTGGTCTTAATTGCCTTCAATCAAGTAGCTCCAGCAGGAG---------ACGGG---AAAAATCACCGCTGAGTTTCC-------TCATACTTCCGGCCAC- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1116510 222 + 81552678 AACAAGATTTTCAAAGTCTTTGGAAAAAGCTGAGCTCATGCTGATTATAGAAAGCATTTGCATCTTTTGAAGGG-TTTTCCTCTGAG-GGTTC---AAATAT---CCCTCAGGGATCGTGCTGGTGACAATCCCAGC---TCGCA--AACTGACTGGTTTTAATTGCCTTCAATCAAGTAGGTCCAACTGGAG---------ACGGG---AAAAATCACCGCTGAGTTTCC-------TCATACTTCCGGCCAC- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1445549 224 + 108979918 AACAAGATTTTCAAAGTTTTTGGAAAAAGCTGAGCTCATGCCGATTATAGAAAGCATTTGCATCTTTTGAAGGG-CTTTCCTCTGAG-GGTTC---AGATAT---CCCTCAGGGATCGTGCTGGTGACAATCCCAGCTTTTTGCA--AACTATCTGGTCTTAATTGCCTTCAATCAAGTCGCTCCAACC-GAG---------ATGGG---AAAAATCACAGCTGAGTTTCC-------TCATACTTCCGGCCAC- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1417983 224 - 111193037 AACAAGATTTTCAAAGTTTTTGGAAAAAGCTGAGCTCATGCCGATTATAGAAAGCATTTGCATCTTTTGAAGGG-CTTTCCTCTGAG-GGTTC---AGATAT---CCCTCAGGGATCGTGCTGGTGACAATCCCAGCTTTTTGCA--AACTATCTGGTCTTAATTGCCTTCAATCAAGTCGCTCCAACC-GAG---------ATGGG---AAAAATCACAGCTGAGTTTCC-------TCATACTTCCGGCCAC- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1445891 224 + 3644372 AACAAGATTTTCAAAGTTTTTGGAAAAAGCTGAGCTCATGCCGATTATAGAAAGCATTTGCATCTTTTGAAGGG-CTTTCCTCTGAG-GGTTC---AGATAT---CCCTCAGGGATCGTGCTGGTGACAATCCCAGCTTTTTGCA--AACTATCTGGTCTTAATTGCCTTCAATCAAGTCGCTCCAACC-GAG---------ATGGG---AAAAATCACAGCTGAGTTTCC-------TCATACTTCCGGCCAC- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1400149 224 - 10304083 AACAAGATTTTCAAAGTTTTTGGAAAAAGCTGAGCTCATGCCGATTATAGAAAGCATTTGCATCTTTTGAAGGG-CTTTCCTCTGAG-GGTTC---AGATAT---CCCTCAGAGATCGTGCTGGTGACAATCCCAGCTTTTTGCA--AACTATCTGGTCTTAATTGCCTTCAATCAAGTCACTCCAACC-GAG---------ATGGG---AAAAATCACAGCTGAGTTTCC-------TCATACTTCCGGCCAC- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1476837 224 - 107702431 AACAAGATTTTCAAAGTTTTTGGAAAAAGCTGAGCTCATGCCGATTATAGAAAGCATTTGCATCTTTTGAAGGG-TTTTCCTCTGAG-GGTTC---AGATAT---CCCTCAGGGATTGTGCTGGTGACAATCCCAGCTTTTTGCA--AACTATCTGGTCTTAATTGCCTTCAATCAAGTCGCTCCAACC-GAG---------ATGGG---AAAAATCACAGCTGAGTTTCC-------TCATACTTCCGGCCAC- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 960260 224 - 2200435 AACAAGATTTTCAAAGTTTTTGGAAAAAGCTGAGCTCATGCCGATTATAGAAAGCATTTGCATCTTTTGAAGGG-CTTTCCTCTGAG-GGTTC---AGATAT---CCCTGAGGGATCGTGCTGGTGACAATCCCAGCTTTTTGCA--AACTATCTGGTCTTAATTGCCTTCAATCAAGTCACTCCAACC-GAG---------ATGGG---AAAAATCACAGCTGAGTTTCC-------TCATACTTCCGGCCAT- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1398648 224 - 13651311 CACAAGATTTTCAAAGTTTTTGGAAAAAGCTGAGCTCATGCCGATTACAGAAAGCATTTGCATCTTTTGAAGGG-TTTTCCTCGGAG-GGTTC---AGATGT---GCCTCAGGGATCGTGCTGGTGACAATCCCAGCTTTTTGCA--AACTGTCTGGTCTTAATTGCCTTCAATCAAGTCGCTCCAACC-GAG---------ATGGG---AAAAATCACAGCTGAGTTTCT-------TCATACTTCCAGCCAC- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1397260 224 - 108792865 AACAAGGTTTTCAAAGTTTTTGGAAAATGCTGAGCTCACGC--GACATAGAAAGCATTTGCATCTTCTGAAGGGATTTTCCTCTGAG-GGCTC---GAATGC---CCCTCAGGGACTGTGCTGGTGACAATCACAGC---TCAAA--AACTGACCAGTCTTAATGGCCTTCAATGAAGTAGTTCCAGCCAGAG---------ATGTGAAAAAAAATCACAGCTGAGATTCC-------TCCTACTTTTGGCCCC- i calJac3.chr14 I 1450 C 0 s saiBol1.JH378218 1238126 221 - 7082604 AAGAAGGTTTTCCAAGCTTTTAGAAAATGCTGAGCTCATGCT-GTTACAGAAAGCACTTGCATCTTCTGAAGGG-TGGTCCTCTGAG-GGCTC---GAATGT---CCCTCAGGGACTGTGCTGGTGACAATCACACC---TGGAA--AACCGACCGATCTTCATGGCCTTCAATCAAGAAGCTCCAGCCAGAG---------ATGTG---ACAAGTCACAGCTGAGTTTCC-------TCGTCCTTCTGGCCCC- i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 125968 220 + 287728 AACAAGGTTTTCAAAGTTTTTGGAAAATGCTGAGCTCATGC--GATATAGAAAGCATTTGCATCTTCTGAAGGG-TTTTCCTCTGAG-GGCTC---GAATGT---CCCTCAGGGACTGTGCTGGTGACAATCACAGC---TCGAA--AACTGACCGGTCTTAACGGCCTTCAATCAAGTAGCTCCAGCCAGAG---------ATGTG---AAAAATCACAGCTGAGTGTCC-------TCAGACTTCTGGCCCC- i aotNan1.NW_018513311v1 C 0 I 106 s mm10.chr12 90017902 191 - 120129022 -GAAAAATTT---AAACTCTTGAAGAAGG----------------TATAGAAAA-----GCAC----------A-TTTCCATCTGAGAGGTCC---CAACAT---GTTTCACTGACCACAGCAATGACAAGCCCACT---TC-------CGGGATGGT-TTAGCTGTCTCCAGTGATGCAGCTCTTGTCAGAGGTTCCCCCCACCCC---CAAATCAAAAACTAAGTTTCT-------TCATTCCTCCAGACCA- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1731062 217 + 4416731 AGTAAGATTTTCAACATTTTTGGAAAATGCTGAATGCATACCAATTATAGAAAA-----GCACTTT---------TCATCTTCTGAG-AGCTTTTAAAATATTTGTCCTGATTGATCATGGCAGTTGACATACCCCT---TCGAAGGAATTGACTGGTTTTAATTGCCTCCCATCAAGCCGTTTAACCA-------------ACCCA---ATAAATAA----TGAGTTACCCATTGTTTTACACTTCAAGGCAAT i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I a score=129991.000000 s hg38.chr2_KI270774v1_alt 132501 17 + 223625 CTGA------CAGGGTGTCAGGC s panTro5.chr2A 1420230 17 + 111504155 CTGA------CAGGGTGTCAGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1369268 17 + 114371477 CTGA------CAGGGTGTCAGGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1393833 17 + 1464242 CTGA------CAGGGTGTCAGGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1116732 17 + 81552678 CTGA------CAGGGTGTCAGGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1445773 17 + 108979918 CTGA------CAGGGCATCAGGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1418207 17 - 111193037 CTGA------CAGGGCATCAGGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1446115 17 + 3644372 CTGA------CAGGGCATCAGGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1400373 17 - 10304083 CTGA------CAGGGCGTCAGGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1477061 17 - 107702431 CTGA------CAGGGCATCAGGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 960484 17 - 2200435 CTGA------CAGGGCGTCAGGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1398872 17 - 13651311 CTGA------CAGGGCGTCAGGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1397484 22 - 108792865 CTGACGCTGTCAGGT-GTCAGGC i calJac3.chr14 C 0 I 141 s saiBol1.JH378218 1238347 16 - 7082604 CTGA------CAGCG-GTCAGGC i saiBol1.JH378218 C 0 C 0 s dasNov3.JH576208 1731279 17 + 4416731 CTGA------CAGGGCattaggt i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 126188 106 + 287728 I e mm10.chr12 90018093 0 - 120129022 C e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I a score=202733.000000 s hg38.chr2_KI270774v1_alt 132518 39 + 223625 GTTTTTGGGGA--CAAAATGAATCCTC------------------------GCACACCTGGCCCA------------------ s panTro5.chr2A 1420247 39 + 111504155 GTTTTTGGGGA--CAAAATGAATCCTC------------------------GCACACCTGGCCCA------------------ i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1369285 39 + 114371477 GTTTTTGGGGA--CAAAATGAATCCTC------------------------GCACACCTGGCCCA------------------ i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1393850 39 + 1464242 ATTTTTGGGGA--CAAAATGAATCCTC------------------------GCACACCTGGCCCA------------------ i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1116749 39 + 81552678 ATCTTTAGGGA--CAAAATGAATCCTC------------------------GCGCACCTGGCCCA------------------ i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1445790 39 + 108979918 GTCTTTGGTGA--CAAGCTGGATTCTC------------------------GGGCACCTGGCCCA------------------ i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1418224 39 - 111193037 GTCTTTGGTGA--CAAGCTGGATTCTC------------------------GGGCACCTAGCCCA------------------ i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1446132 39 + 3644372 GTCTTTGGTGA--CAAGCTGGATTCTC------------------------GGGCACCTGGCCCA------------------ i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1400390 39 - 10304083 ATCTTTGGTGA--CAAGCTGGATCCTT------------------------GGGCACCTGGCCCA------------------ i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1477078 39 - 107702431 ATCTTTGGTGA--CAAGCTGGATTCTC------------------------GCGCACCTGGCCCA------------------ i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 960501 39 - 2200435 ATCTTTGGTGA--CAAGCTGGATCCTT------------------------GGGCACCTGGCCCA------------------ i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1398889 39 - 13651311 ATCTTTGGTGA--CAAGCTGGATCCTT------------------------GGGCACCTGGCCCA------------------ i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1238363 39 - 7082604 ATCTTTGGGGA--CAAAATGAGTCCTC------------------------GGGTCCCTGGGCCA------------------ i saiBol1.JH378218 C 0 C 0 s mm10.chr12 90018093 44 - 120129022 GCTTTTAGAAG--TATAGTGAACCCCC-------------------TTGGGTCACTCTGGGACCA------------------ i mm10.chr12 C 0 I 222 s dasNov3.JH576208 1731296 83 + 4416731 gtctttgggaaagcaaattaattccttcaggccagttgggtactatttagtaaattcctgctacggggtaattaaataatcct i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 126188 106 + 287728 I e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e calJac3.chr14 1397506 141 - 108792865 I a score=36931.000000 s hg38.chr2_KI270774v1_alt 132557 6 + 223625 -GCAGGA s panTro5.chr2A 1420286 6 + 111504155 -GCAGGA i panTro5.chr2A C 0 I 58 s panPan2.chr2A 1369324 6 + 114371477 -GCAGGA i panPan2.chr2A C 0 I 58 s gorGor5.CYUI01015607v1 1393889 6 + 1464242 -GCAGGA i gorGor5.CYUI01015607v1 C 0 I 25 s nomLeu3.chr19 1116788 6 + 81552678 -GCGGGA i nomLeu3.chr19 C 0 I 1 s rheMac8.chr13 1445829 6 + 108979918 -GCAGGA i rheMac8.chr13 C 0 I 21 s macFas5.chr13 1418263 6 - 111193037 -GCAGGA i macFas5.chr13 C 0 I 21 s macNem1.NW_012011978v1 1446171 6 + 3644372 -GCAGGA i macNem1.NW_012011978v1 C 0 I 21 s cerAty1.NW_012000820v1 1400429 6 - 10304083 -GCAGGA i cerAty1.NW_012000820v1 C 0 I 21 s chlSab2.chr14 1477117 6 - 107702431 -GCAGGG i chlSab2.chr14 C 0 I 21 s manLeu1.NW_012103754v1 960540 6 - 2200435 -GCAGGA i manLeu1.NW_012103754v1 C 0 I 21 s colAng1.NW_012118821v1 1398928 6 - 13651311 -GCAGGA i colAng1.NW_012118821v1 C 0 I 21 s saiBol1.JH378218 1238402 6 - 7082604 -GCAGGA i saiBol1.JH378218 C 0 I 21 s dasNov3.JH576208 1731379 6 + 4416731 ctTGGG- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 126188 106 + 287728 I e mm10.chr12 90018137 222 - 120129022 I e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e calJac3.chr14 1397506 141 - 108792865 I a score=-2321.000000 s hg38.chr2_KI270774v1_alt 132563 6 + 223625 TGAG-------------GG s gorGor5.CYUI01015607v1 1393920 19 + 1464242 TGAGCACCTCCCATACAGG i gorGor5.CYUI01015607v1 I 25 I 14 s nomLeu3.chr19 1116795 6 + 81552678 -------------TGCAGG i nomLeu3.chr19 I 1 I 51 s rheMac8.chr13 1445856 4 + 108979918 ---------------TGGG i rheMac8.chr13 I 21 I 33 s macFas5.chr13 1418290 4 - 111193037 ---------------TGGG i macFas5.chr13 I 21 I 33 s macNem1.NW_012011978v1 1446198 4 + 3644372 ---------------TGGG i macNem1.NW_012011978v1 I 21 I 33 s cerAty1.NW_012000820v1 1400456 4 - 10304083 ---------------TGGG i cerAty1.NW_012000820v1 I 21 I 33 s chlSab2.chr14 1477144 4 - 107702431 ---------------TGGG i chlSab2.chr14 I 21 I 33 s manLeu1.NW_012103754v1 960567 4 - 2200435 ---------------TGGG i manLeu1.NW_012103754v1 I 21 I 33 s colAng1.NW_012118821v1 1398955 4 - 13651311 ---------------TGGG i colAng1.NW_012118821v1 I 21 I 33 s saiBol1.JH378218 1238429 4 - 7082604 ---------------TGGG i saiBol1.JH378218 I 21 I 66 s dasNov3.JH576208 1731385 6 + 4416731 -------------TCTCAG i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 126188 106 + 287728 I e mm10.chr12 90018137 222 - 120129022 I e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e calJac3.chr14 1397506 141 - 108792865 I e panPan2.chr2A 1369330 58 + 114371477 I e panTro5.chr2A 1420292 58 + 111504155 I a score=16513.000000 s hg38.chr2_KI270774v1_alt 132569 2 + 223625 CA s panTro5.chr2A 1420350 2 + 111504155 CA i panTro5.chr2A I 58 C 0 s panPan2.chr2A 1369388 2 + 114371477 CA i panPan2.chr2A I 58 C 0 s gorGor5.CYUI01015607v1 1393953 2 + 1464242 CA i gorGor5.CYUI01015607v1 I 14 C 0 s nomLeu3.chr19 1116852 2 + 81552678 CA i nomLeu3.chr19 I 51 C 0 s rheMac8.chr13 1445893 2 + 108979918 CA i rheMac8.chr13 I 33 C 0 s macFas5.chr13 1418327 2 - 111193037 CA i macFas5.chr13 I 33 C 0 s macNem1.NW_012011978v1 1446235 2 + 3644372 CA i macNem1.NW_012011978v1 I 33 C 0 s cerAty1.NW_012000820v1 1400493 2 - 10304083 CA i cerAty1.NW_012000820v1 I 33 C 0 s chlSab2.chr14 1477181 2 - 107702431 CA i chlSab2.chr14 I 33 C 0 s manLeu1.NW_012103754v1 960604 2 - 2200435 CA i manLeu1.NW_012103754v1 I 33 C 0 s colAng1.NW_012118821v1 1398992 2 - 13651311 CA i colAng1.NW_012118821v1 I 33 C 0 s calJac3.chr14 1397647 2 - 108792865 CA i calJac3.chr14 I 141 C 0 s saiBol1.JH378218 1238499 2 - 7082604 CA i saiBol1.JH378218 I 66 C 0 s dasNov3.JH576208 1731391 2 + 4416731 TG i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 126188 106 + 287728 I e mm10.chr12 90018137 222 - 120129022 I e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I a score=1786439.000000 s hg38.chr2_KI270774v1_alt 132571 235 + 223625 TCCCGTG---------------------TCCCGCTGCTGCT-------CCGCTGAGAAAGAGGTGCCGTTAC----AGGAGTGGAAAGCTGACTTCGTCCACAGTTTCTCTCCCAGCATTTCACACTGCATTGCTGTTTGCTTCTTTT-CATGGGCGGCACACATCTCTGGCACTCAGCGTGT-CCATGTGCT-GTTACTGGATGGCCATACCTGGCAAA--CATATTGACCTGTG---TCTTGC-GGCCTCAGTCCACAGCTTTATGCTCAAGCG s panTro5.chr2A 1420352 235 + 111504155 TCCCGTG---------------------TCCCGCTGCTGCC-------CCGCTGAGAAAGAGGTGCCGTTAC----AGGAGTGGAAAGCTGACTTCGTCCACAGTTTCTCTCCCAGCACTTCACACTGCATTGCTGTTTGCTTCTTTT-CATGGGCGGCACACATCTCTGGCACTCAGCGTGT-CCATGTGCT-GTTACTGGATGGCCACACCTGGCAAA--CATATTGACCTATG---TCTTGC-TGCCTCAGTCCACAGCTTTATGCTCAAGCG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1369390 235 + 114371477 TCCCGTG---------------------TCCCGCTGCTGCC-------CCGCTGAGAAAGAGGTGCCGTTAC----AGGAGTGGAAAGCTGACTTCGTCCACAGTTTCTCTCCCAGCACTTCACACTGCATTGCTGTTTGCTTCTTTT-CATGGGCGGCACACATCTCTGGCACTCAGCGTGT-CCATGTGCT-GTTACTGGATGGCCACACCTGGCAAA--CATATTGACCTATG---TCTTGC-TGCCTCAGTCCACAGCTTTATGCTCAAGCG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1393955 234 + 1464242 TCCCGTG---------------------TCCCACTGCTGCC-------CCGCTGAGAAAGAGGTGCCGTTAC----AGGAGTGGAAAGCTGACTTCGTCCACAGTTTCTCTCCCAGCGTATCACACTGCATTGCTGTTTGCTTCTTTT-CATGGGCGGCACACATCTCTGGCACTCAGC-TGT-CCATGTGCT-GTTATTGGGTGGCCACACTTGGCAAA--CATATTGACCTGTG---TCTTGC-GGCCTCAGTCCACAGCTTTATGCTCAAGCG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1116854 236 + 81552678 TCCCGTG---------------------TCCCGCTGCTGCC-------CCGCTGAGAAAGAGGTGTGGTCACAG-AAGGAGTAGAAAGCTGACTTCTTC--CAGTTTCTCTCCCAGCGTATCACACTGCATTGCTGTGTGCTTCTTTT-CACAGGCGGCACACATCTCTGGCGCTCAGAGCGT-CTGCATGCT-GTTACTGGATGGCCACACCTGGCAAA--CATATTGACCTGTG---TCTTGT-GGCCTCAGTCCCCAGCTTTATGCTCAAGCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1445895 237 + 108979918 TCCCATG---------------------TCCCGCCGCCGCC-------CAGCTGAGAAAGAGGTGTGGTTGCAG--AGGAGTGGAAAGCTGACTTCTTCCACTGTTTCTCTCCCAGCGTGTCACACTGCATTGCTGTGTGCTTCTTTT-CACGGGCGGCACATGCCTCTGGCACTGAGCGTGC-CCGTGTGCT-GTTACTGGACGGCCACACCTGGCAAA--CATATTGACCCGTG---TCTCTC-AGCCTCAGGCCGCAGCTTCACGCTCCAGCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1418329 237 - 111193037 TTCCATG---------------------TCCCGCCGCCGCC-------CAGCTGAGAAAGAGGTGTGGTTGCAG--AGGAGTGGAAAGCTGACTTCTTCCACTGTTTCTCTCCCAGCGTGTCACACTGCATTGCTGTGTGCTTCTTTT-CACGGGCGGCACACGCCTCTGGCACTGAGCGTGC-CCGTGTGCC-GTTACTGGACGGCCACACCTGGCAAA--CATATTGACCCGTG---TCTCTC-AGCCTCAGGCCGCAGCTTCACGCTCCAGCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1446237 237 + 3644372 TCCCATG---------------------TCCCGCCGCCGCC-------CAGCTGAGAAAGAGGTGTGGTTGCAG--AGGAGTGGAAAGCTGACTTCTTCCACTGTTTCTCTCCCAGCGTGTCACACTGCATTGCTGTGTGCTTCTTTT-CACGGGCGGCACACGCCTCTGGCACTGAGCGTGC-CCGTGTGCC-GTTACTGGACGGCCACACCTGGCAAA--CATATTGACCTGTG---TCTCTC-AGCCTGAGGCCGCAGCTTCATGCTTCAGCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1400495 237 - 10304083 TCCCATG---------------------TCCCGCCGCCGCC-------CAGCTGAGAAAGAGGTGTGGTTGCAG--AGGAGTGGAAAGCTGACTTCCTCCACTGTTTCTCTCCCAGCGCGTCACACTGCATTGCTGTGTGCTTCTTTT-CACAGGCGGCACATACCTCCGGCACTGAGCGTGT-CCATGTGCC-GTTACTGGACGGCCACACGTGGCAAA--CATATTGACCCGTG---TCTCTC-AGCCTCAGGCCACAGCTTCATGCTCTAGCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1477183 237 - 107702431 TCCCATG---------------------TCCCGCCGCCACC-------CAGCTGAGAAAGAGGTGTGGTTGCAG--AGGAGTGGAAAGCTGACTTCTTCCACTGTTTCTCTCCCAGCGTGTCACACTGCATTGCTGTGTGCTTCTTTT-CACGGGCGGCACACGCCTCTGGCACTGAGCGTGT-CCGTGTGCC-ATTACTGGACGGCCACACCTGGCAAA--CATATTGACCTGTG---TCTCTC-AGCCTCAGGCTGCAGCTTCATGCTCCAGCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 960606 237 - 2200435 TCCCATG---------------------TCCCGCCGCCGCC-------CAGCTGAGAAAGAGGTGTGGTTGCAG--AGGAGTAGAAAGCTGACTTCTTCCACTGTTTCTCTCCCAGCGTGTCACACTGCATTGCTGTGTGCTTCTTTT-CACGGGCGGCACACACCTCCGGCACTGAGCGTGT-CCATGTGCC-GTTACTGGACGGCCACACCTGGCAAA--CATATTGACCCGTG---TCTCTT-AGCCTCAGGCCACAGCTTCACGCTCCAGCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1398994 238 - 13651311 TCCCATG---------------------TCCCGCCGCCGCC-------CAGCTGAGAAAGAGGTGTGGTTGCAG--AGGAGTGGAAAGCTGATTTCTTCCACTGTTTCTCTCCCAGCATGTCACACTGCATTGCTGTGTGCTTCTTTT-CACAGGCGGCACACACCTCTGGCACTGAGCGTGT-CCATGTGCT-GTTACTGGACAGCCACACCTGGCAAA--CATATTGACCTGTG---TCTCTCAAGCCTCAGGCCACAGCTTCACGCTCCAGCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1397649 236 - 108792865 TCCCACG---------------------TCCCGC-GCCGCC-------CCGCTGAGGAAGAAGTGTGGTTAC----AGAAGTGGAAAGCTGACTTCTTCGGCGGTGTCTCTCCCAGGGCTTCACACTGCGTGGCTGTGTGCTTCTTCT-CATGGGTGACACACACCTCCGGC-CTGAGCGTGT-CCGTGTGAG-GTTACTGGACGGCCACACCTGGAAAA--CACATTGACCTGTACGTCCTCCC-TGCATCCGTCCACAGCTTTACTCTCAAGCG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1238501 233 - 7082604 TCCCACG---------------------TCCCGC-GCCGCC-------CAGCTGAGGAAGATGTGCGGTTAC----AGAAGTGGAAAGCCAACTTCCTCGGCCGTTTCTCTCCCAGGGCATCACACTGTGTGGCTGCGTGCTGCTTCT-CGTGGGTG--ACACACCTCTGGC-CTGAGCGTGT-CCATGTGAG-GTTACTGGACGGCCGCAGCTGGAAAA--CGCATTGACCTGTGCGTCC-CCC-CACATCTGTCCACAGCTCTGCTCTCAAGTG i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 126294 231 + 287728 TCCCACG---------------------TCCCGC-GCCGCC-------CAGCTGAGGAAGAGGTGTGGCCAC----AGAAGTGGAAAGCTGACTTCTTCGGCGGTTTCTCT-CCAGGGCATCACACTGCGTGGCTGCGTGCTTCTTCT-CATGGGTGACACACACCTCCGGC-CTGAGCGTGT-CCGTGTGAG-GTTACTGGA----CACACCTGGAAAA--CACATGGACCTGTGCGTCCTCCC-TGCATCCATCCACAGCTTTACTCTCAAGCG i aotNan1.NW_018513311v1 I 106 C 0 s dasNov3.JH576208 1731393 261 + 4416731 TCCCATGGCAAAGCAACACCTGTCTTATTTCCACCACCACTATGCCCACTACCAAGAAAATGAGAAGGATAAAGTAAGAAATTGAAAGCTGACTTTT------AAGTTTCTCCCAGCATATAATACTACATTTTATTCTTTTTCTTTTCCAAGAAGGACACAGATCTTTAGAGTTAAACATATCCCATATGTTAGTAACAGGGATGACACACCTGGCAGAATTATATTAA-----G---TCTCTT-GGCATCAATCTTAAACTTTACAGTCAAGCT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90018137 222 - 120129022 I e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I a score=4232893.000000 s hg38.chr2_KI270774v1_alt 132806 486 + 223625 CTCTTCAAGATGGAAGTTTAGAATTTC--TTCTTTTTGGAATTCAGAA-ATCACAAAGTCTCCAGTGCCAGGTGCCTGGGAGAGGGGAACTAGGGTCCC--AGGGAAATCAGAGTGACTCGGAGCCTCAGCAGGAGCACAGACCTCAGTCTCCCTCATAAAACTCTCCTCCAGAAATGTTTCTCTTTGTTCAT-TTTGTCAGCTTTATGAGC----CTTTTTCCAATGCTGCCATTAAT-TCAGATCTAAG--AAAGGAA----------------CAGTGTGGTACAATAGAT---TTCCACTGGGA--A--AGGATCTTTCCAACAGGAGCT----------------GATCAAAGTCTCAGAGGGACCCTTC------------------------------------------------------------------------------TC---AGTCCTGCTGACCTGC-----------------TGACCGTGA------AGGTCAGGTG-ACACATTTGCGGAGGGTCCACAACAAACGTCTGTGAGTGCCCTTGAGCCATTGTAATGTCCTAGTGAACTGCTGACATATAAAAGTCAATCAGC-------AAAA-------------AAAATCACTGCTTAAGCAGTTAAATTAA s panTro5.chr2A 1420587 486 + 111504155 CTCTTCAAGATGGAAGTTTAGAATTTC--TTCTTTTTGGAATTCAGAA-ATCACAAAGTCTCCAGTGCCAGGTGCCTGGGAGAGGGGAACTAGGGTCCC--AGGGAAATCAGAGTGACTCGGAGCCTCGGCAGGAGCACAGACCTCAGTCTCCCTCATAAAACTCTCCTCTAGAAATGTTTCTCTTTGTTCAT-TTTGTCAGCTTTATGAGC----CTTTTTCCAATGCTGCCATTAAT-TCAGATCTAAG--AAAGGAA----------------CAGTGTGGTGCAATAGAT---TTCCACTGGGA--A--AGGATCTTTCCAACAGGAGCT----------------GATCAAAGTCGCAGAGGGACCCTTC------------------------------------------------------------------------------TC---AGTCCTGCTGACCTGC-----------------TGACCGTGA------AGGTCAGGTG-ACACATTTGTGGAGGGTCCACAGCAAACATCCGTGAGTGCTCTTGAGCCATTGTAATGTCCTAGTGAACTGCTGAAATATAAAAGTCAATCAGC-------AAAA-------------AAAATCACTGCTTAAGCAGTTAAATTAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1369625 486 + 114371477 CTCTTCAAGATGGAAGTTTAGAATTTC--TTCTTTTTGGAATTCAGAA-ATCACAAAGTCTCCAGTGCCAGGTGCCTGGGAGAGGGGAACTAGGGTCCC--AGGGAAATCAGAGTGACTCGGAGCCTCGGCAGGAGCACAGACCTCAGTCTCCCTCATAAAACTCTCCTCTAGAAATGTTTCTCTTTGTTCAT-TTTGTCAGCTTTATGAGC----CTTTTTCCACTGCTGCCATTAAT-TCAGATCTAAG--AAAGGAA----------------CAGTGTGGTGCAATAGAT---TTCCACTGGGA--A--AGGATCTTTCCAACAGGAGCT----------------GATCAAAGTCGCAGAGGGACCCTTC------------------------------------------------------------------------------TC---AGTCCTGCTGACCTGC-----------------TGACCGTGA------AGGTCAGGTG-ACACATTTGCGGAGGGTCCACAGCAAACATCCGTGAGTGCTCTTGAGCCATTGTAATGTCCTAGTGAACTGCTGAAATATAAAAGTCAATCAGC-------AAAA-------------AAAATCACTGCTTAAGCAGTTAAATTAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1394189 486 + 1464242 CTCTTCAAGATGGAAGTTTAGAATTTC--TTCTTTTTGGAATTCAGAA-ATCACAAAGTCTCCAGTGCCAGGT-CCTGGGAGAGGGGAACTAGGGTCCC--AGGGAAATCAGAGTGACTCGGAGCCTTGGCAAGAGCACAGACCTCAGTCTCCCTCATAAAACTCTCCTCCAGAAATGTTTCTCTTTGCTCAT-TTTGTCAGCTTTATGAGC----CTTTTTCCAATGCTGCCATTAAT-TCAGATCTAAG--AAAGGAA----------------CAGTGTGGTGCAATAGAT---TTCCACTGGGA--A--AGGATCTTTCCAACAGGAGCT----------------GATCAAAGTCTCAGAGGGACCCTTC------------------------------------------------------------------------------TC---AGTCCTGCTGACCTGC-----------------TGACCGT-A------AGGTCAGGTG-ACACATTTGCAGAGTGTCCACAGAAAACATCTGTGAGTGCTCTTGAGCCATTGTAATGTCCTAGTGAACTGCTGAAATATAAAAGTCAATCAGC---AA--AAAA-------------AAAATCACTGCTTAAGCAGTTAAATTAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1117090 487 + 81552678 CTCTTCAAGATGGAAGTTTAGAATTTC--TTCTCTTTGGAATTCAGAA-ATCACAAAGTCTCCAGTGCCAGGTGCCTGGGAGAGGGGAGCTAGGGTCCC--AGGGAAATCAGAGTGACTTAGAGCCTCAGCGGGAGCACAGACCTCAGTCTCCCTCATAAAACTGTCCCCCAGAAATGTTTCTCTTTGCTCAT-TTTGTCAGCTTTATGAGC----CTTTTTCCGATGCTGCCGTTAAT-CCAGACCTAAG--AAAGGAA----------------CAGTATGGTGCAATAGGT---TTCCACTGGGA--A--AGGGTCTTTCCAACAGGAGCT----------------GAGCAAAGTCTCAGAGGGACCCTTC------------------------------------------------------------------------------TC---AGTCCTGCTGACCTGC-----------------GGACCGTGA------AGGTCAGGTG-ACACATTTGCGAAGCGTCCACAACAAACATCTGTGAGTGCTCTTGGGCCACTGTAGTGTCTTAGTGAACTGCTGAAATATAAAAGTCAATCAGC---AA--AAAA-------------AAAATCACTGCTTAAGCA-TTAAATTAA i nomLeu3.chr19 C 0 I 5 s rheMac8.chr13 1446132 482 + 108979918 CTCTTCAAGATGGAAGTTTAGAATTTCTTTTCTCTTTGGAATTCAGAA-ATCACAAAGTCTCCATTGCCAGGTGCCTGGGAGAGGGGAGCTAGTGTCCC--AGGGAAATCAGAGTGACTCGGAGCCTCGGTGGGAGCACAGACCTCGGTCTCCCTCCTGAAACTCTCCTCCAGAAATGTTTCTCTTTGCTCAT-TTTGTCAGCTTTATGATC----CTTTTTCCCATGCTGCCGTTAAT-CCAGATCTAAT--GAAGGAA----------------CAGTGTGGTGCAATAGGC---GTCCACTGGGA--A--AGGGTCTTTCCAACAGGAGCT----------------GAGCAAAGTCTCAGAGGGACCC-TC------------------------------------------------------------------------------TC---AGTCCTGCTGACCTGC-----------------TGACCATGA-----------AGGTG-ACACATTTGCGGAACGTCCACAACAAACATCTGTGAGTGCTCTTGGGCTGTTGTGATGTCCTAGTGAACTGCTGAAATAGAAAAGTCAATCAGC-------AAAA-------------AAAATCACCACTTAAGCAGTTAAATTAG i rheMac8.chr13 C 0 I 5 s macFas5.chr13 1418566 482 - 111193037 CTCTTCAAGATGGAAGTTTAGAATTTCTTTTCTCTTTGAAATTCAGAA-ATCACAAAGTCTCCATTGCCAGGTGCCTGGGAGAGGGGAGCTAGTGTCCC--AGGGAAATCAGAGTGACTCGGAGCCTCGGTGGGAGCACAGACCTCGGTCTCCCTCCTGAAACTCTCCTCCAGAAATGTTTCTCTTTGCTCAT-TTTGTCAGCTTTATGATC----CTTTTTCCCATGCTGCCGTTAAT-CCAGATCTAAT--GAAGGAA----------------CAGTGTGGTGCAATAGGT---GTCCACTGGGA--A--AGGGTCTTTCCAACAGGAGCT----------------GAGCAAAGTCTCAGAGGGACCC-TC------------------------------------------------------------------------------TC---AGTCCTGCTGACCTGC-----------------TGACCATGA-----------AGGTG-ACACATTTGCGGAACGTCCACAACAAACATCTGTGAGTGCTCTTGGGCTGTTGTGATGTCCTAGTGAACTGCTGAAATAGAAAAGTCAATCAGC-------AAAA-------------AAAATCACCACTTAAGCAGTTAAATTAG i macFas5.chr13 C 0 I 5 s macNem1.NW_012011978v1 1446474 482 + 3644372 CTCTTCAAGATGGAAGTTTAGAATTTCTTTTCTCTTTGGAATTCAGAA-ATCACAAAGTCTCCATTGCCAGGTGCCTGGGAGAGGGGAGCTAGTGTCCC--AGGGAAATCAGAGTGACTCGGAGCCTCGGTGGGAGCACAGACCTCGGTCTCCCTCCTGAAACTCTCCTCCAGAAATGTTTCTCTTTGCTCAT-TTTGTCAGCTTTATGATC----CTTTTTCCCATGCTGCCGTTAAT-CCAGATCTAAT--GAAGGAA----------------CAGTGTGGTGCAATAGGT---GTCCACTGGGA--A--AGGGTCTTTCCAACAGGAGCT----------------GAGCAAAGTCTCAGAGGGACCC-TC------------------------------------------------------------------------------TC---AGTCCTGCTGACCTGC-----------------TGACCATGA-----------AGGTG-ACACATTTGCGGAACGTCCACAACAAACATCTGTGAGTGCTCTTGGGCTGTTGTGATGTCCTAGTGAACTGCTGAAATAGAAAAGTCAATCAGC-------AAAA-------------AAAATCACCACTTAAGCAGTTAAATTAG i macNem1.NW_012011978v1 C 0 I 5 s cerAty1.NW_012000820v1 1400732 481 - 10304083 CTCTTCAAGATGGAAGTTTAGAATTTCTTTTCTCTTTGGAATTCAGAA-ATCACAAAGTCTCCATTGCCAGGTGCCTGGGAGAGGGGAGCTAGTGTCCC--AGGGAAATCCGAGTGACTCGGAGCCTCGGTGGGAGCACAGACCTCGGTCTCCCTCCTGAAACTCTCCTCCAGAAATGTTTCTCTTTGCTCAT-TTTGTCAGCTTTATGATC----CTTTTTCCCATGCTGCCGTTAAT-CCAGATCTAAT--GAAGGAA----------------CAGTGTGGTGCAATAGGT---GTCCACTGGGA--A--AGGGTCTTTCTAACAGGAGCT----------------GAGCAAAGTCTC-GAGGGACCC-TC------------------------------------------------------------------------------TC---AGTCCTGCTGACCTGC-----------------TGACCGTGA-----------AGGTG-ACACATTTGCGAAACGTCCACAACAAACATCTGTGAGTGCTCTTGGGCTGTTGTGATGTCCTAGTGAACTGCTGAAATAGAAAAGTCAATCAGC-------AAAA-------------AAAATCACCGCTTAAGCAGTTAAATTAG i cerAty1.NW_012000820v1 C 0 I 5 s chlSab2.chr14 1477420 482 - 107702431 CTCTTCAAGATGGAAGTTTAGAATTTCTTTTCTCTTTGGAATTCAGAA-ATCACAAAGTCTCCATTGCCAGGTGCCTGGGAGAGGGGAGCTAGTGTCCC--AGGGAAATCAGAGTGACTCGGAGCCTCGGTGGGAGCACAGACCTCGGTCTCCCTCCTGAAACTCTCCTCCAGAAATGTTTCTCTTTGCTCAT-TTTGTCAGCTTTATGATC----CTTTTTCTGATGCTGCCGTTAAT-CCAGATCTAAT--GAAGGAA----------------CAGTGTGGTGCAATAGGT---GTCCACTGGGA--A--AGGGTCTTTCCAACAGGAGCT----------------GAGCAAAGTCTCAGAGGGACCC-TC------------------------------------------------------------------------------TC---AGTCCTGCTGACCTGC-----------------TGACCATGA-----------AGGTG-ACACATTTGTGGAACGTCCACAACAAACATCTGTGAGTGCTCTTGGGCTGTTGTGATGTCCTAGTGAACTGCTGAAATAGAAAAGTCAATCAGC-------AAAA-------------AAAATCACCGCTCAAGCAGTTAAATTAG i chlSab2.chr14 C 0 I 5 s manLeu1.NW_012103754v1 960843 481 - 2200435 CTCTTCAAGATGGAAGTTTAGAATTTCTTTTCTCTTTGGAATTCAGAA-ATCACAAAGTCTCCATTGCCAGGTGCCTGGGAGAGGGGAGCTAGTGTCCC--AGGGAAATCCGAGTGACTCGGAGCCTCGGTGGGAGCACAGACCTCGGTCTCCCTCCTGAAACTCTCCTCCAGAAATGTTTCTCTTTGCTCGT-TTTGTCAGCTTTGTGATC----CTTTTTCCCATGCTGCCGTTAAT-CCAGATCTAAT--GAAGGAA----------------CAGTGTGGTGCAATAGGT---GTCCACTGGGA--A--AGGGTCTTTCTAACAGGAGCT----------------GAGCAAAGTCTC-GAGGGACCC-TC------------------------------------------------------------------------------TC---AGTCCTGCTGACCTGC-----------------TGACCGTGA-----------AGGTG-ACACATTTGCGGAACGTCCACAACAAACATCTGTGAGTGCTCTTGGGCTGTTGTGATGTCCTAGTGAACTGCTGAAATAGAAAAGTCAATCAGC-------AAAA-------------AAAATCACCGCTTAAGCAGTTAAATTAG i manLeu1.NW_012103754v1 C 0 I 5 s colAng1.NW_012118821v1 1399232 482 - 13651311 CTCTTCAAGATGGAAGTTTAGAATTTCTTTTCTCTTTGGAATTCAGAA-ATCACAAAGTCTCCATTGCCAGGTGCCTGGGAGAGGGGAGCTAGTGTCCC--AGGGAAATCAGAGTGACTCGGAGCCTCGGCGGGAGCACAGACCTCGGTCTCCCTCCTAAAACTCTCCTCCGGAAATGTTTCTCTTTGCTCAT-TTTGTCAGCTTTATGATC----CTTTTTCCGATGCTGCCGTTAAT-CCAGATCTAAT--GAAGGAA----------------CAGTGCGGTGCAATAGCT---TTCCACTGGGA--A--AGGGTCTTTCCAACAGGAGCT----------------GAGCAAAGTCTCAGAGGGACCC-TC------------------------------------------------------------------------------TC---AGTCCTGCTGACCTGC-----------------TGACCGTGA-----------AGGTG-ACACATTTGCGGAACATCCACAACAAACATCTGTGAGTGCTCTTGGGCTGTTGTAATGTCCTAGTGAACTGCTGAAATAGAAAAGTCAATCAGC-------AAAA-------------AAAATCACCGCTTAAGCAGTTAAATTAG i colAng1.NW_012118821v1 C 0 I 5 s calJac3.chr14 1397885 486 - 108792865 CTCTTCAAGCCGGAAGTTTAGGATTTTTTTTCTCTTTGGAATTCAGAA-ATCACGAAGTCTGCAGTGCCTGGTGCCTGGGAGAGGGGAGCCAGGGTCCC--A---AAATCAGAGTGACTCAGAGCCTCGGCGGGAGCACAAACCTCTGTCTCCCTCATAAAACTCTCCTCCAGCAACGTTTCTCTTTGCTCA----TGTCAGCTTTGTGAGC----CTTTTTCTGACGCTGCCATTAAT-CCAGATCTAAT--GAGGGAA----------------CATTGGGGTGCATTAGGT---TCCCACCAGGA--A--AGGGTCTTTCCAGCAGGAGCT----------------GAGCAGCATCTTGGAGGGACCT-TC------------------------------------------------------------------------------TC---AGTCCTGCTGACCTGA------------------GACCGTGA------AGGTT-GGTG-ACACATTTGCGGAGAGTCCACAGCAAACA----TGAGTGCTCTTGGGCTATTCTAATGTCCTCGTGAACTGCTGAAATATAAAAGCCAATCAGC---AAT-AAAAAAGAAAAG-----AAAATCACTGCATAAGCAGTTAAATTAA i calJac3.chr14 C 0 I 335 s saiBol1.JH378218 1238734 497 - 7082604 CTCTTCAAGCCAGAAGTTTAGAATTTCCTTTCTCTTTGGAATTCAGAA-ATCACGAAGTCTGCAGTGCCTGGTGCCTGGGAGAGGGGAGCCAGGGTCTC--A---AAATCAGAGTGACTCGGAGCCTCGGTGGGAGCACAGACCTCTGTCTCCCTCATGAAACTCTCCTCCAGAAACGTTTCTCTTTGCTCAT-TTTGTCAGCCTTGTGAGC----CTTTTTCTGATGCTGCCGTTAAT-CCAGCTCTAAT--GAAGGAA----------------CACTGGGGTGCACT-GGT---TCCCACCAGGA--A--AGGGTCTTTCCAACAGGAGCT----------------GACCAGCGTCTCGGAGGGACCT-TC------------------------------------------------------------------------------TC---AGTCCTGCTGACCTGC-----------------TGACCGTGA------AGGTTGGGTG-ACACGTTTGCGGAGTGTCCACAGCAAACACC--TGCTTGCTCTTGGGCTATGGTAATGTCCTCGTGAACTGCTGAAATATAAAGGCCAGTCAGC---AAT-AAAAAAGAAAAGAAAACAAAATCACTGCTTAAGCCATTAAATTAC i saiBol1.JH378218 C 0 I 5 s aotNan1.NW_018513311v1 126525 492 + 287728 CTCTTCAAGCCGGCAGTTTAGAATTTCCTTTCTCTTTGGAATTCAGAA-ATCACGAAGTCTACAGTGCCCGGTGCCTGGGAGAGGGGAGCCAGGGTCCC--A---AAATCAGAGTGACTTGGAGCCTCGGCGGGGGCACAGAC--CTGTCTCCCTCATAAAACTCTCCTCCAGAAGCGTTTCTCTTTGCTCAT-TTTGTCAGCTTTGTGAGC----CTTTTTCTGATGCTGCCGTTAAT-CCAGATCCAAT--GAAGGAA----------------CATTGGGGCGCATTAGGG---TCCCACCAGGA--A--AGGGTCGTTCCAGCAGGAGCC----------------AACCAGCATCTCCGAGGGACCT-TC------------------------------------------------------------------------------TC---AGTCCTGCTGACCTGC-----------------TGACCGTCA------AGGTCGGGTG-ACACATTTGCGGAGAGGCCACGGCAAACATC--TGAGTGCTCTTGGGCTGTTGTAATGTCCTCGTGAACTGCTGGAATATAAAAGCCAATCAGC---AATAAAAAAAGCAAAG-----AAAATCACGGCTTAAGCAGTTAAATTAA i aotNan1.NW_018513311v1 C 0 I 5 s mm10.chr12 90018359 483 - 120129022 CCTGTTGAGCTGGAAGTCTAAGAGCATCTTTCTTGTTAGAATGTGGAATACTGAGGTGACTACAATACCTGATGCCT----------------------------AAGTCC-AGTCACT-GGAGCTCTGATGGGAGAACAGGTACCA--CTCCCT--GGAAAATCACTTTCAGAACTGTTTCTGTTCACGC-T-GCTGCCAG---------C----ATGTTTGAATGGCCGCCATGAAC-CCAAGCCTAAT--AAAGGAAGAGCTGACGATGAGTGCAGTATGATACAGC--GA---CTCCACTAAGG--ATGAAGGCTCGTTCAGCACATGCTCGTGGGTGTTTATGTGGTCCAGAGCCAACGAGAGGCAT-TCAA-------------------------------------------------------------------TAATGTCCATCTGGGGTCCCGTTAAGCAGC-----------------TGATCCTAACTGTCCAGGTTCAGCG-ATATACT----GTGTGTTCACAACA-----------GTGTTCTTGAGCACCTAAGACCTCTTAGTGGGATTCTGAAATATAAAAGCCA-TCAGGTGGAA--AAAA-------------GAACTCACAGC--AAG--GTTGTATAAA i mm10.chr12 I 222 I 2 s dasNov3.JH576208 1731654 598 + 4416731 GTCTTCAAGCTGGAAGCTTAGAATTTTGTTTCCCTTTAGAATTCAGAATAACACAACGCCTATAGTGACTGTTGCCTGGGAGAAATGAGAAAGTGTTTCTAAAAAAAATCATAATAACTAAGCTCCACTATGATAGCACAGACATTTGTCTCCCT-ATAAAACGCTCTTCCAGAAATGTTTCTATTCATTTATATTGGTCAGCTTTATGGTTACCATTTTTTCTGATGCTGCCATGAATCCCAAATATAATACAAAGGAC----------------AAATGTGGTACTATAAATTGATCCCATTGTGCCTA--GAGAGCCTTCCAACACAAGCT----------------CAGCATTATCTAAGGGTGGTCCTTCAAAGACTTGAAGAGATAAGAATAAGGACCAGAAGTTCCCAAGACAGTAGCAGAGGCAACCAGAAGCAAGTGTTATACATC---CATTTTGTGGACCTGCTGAAGAGGCTAACACACTGATTATGA------AGCTGAAGTGCACACATCAGCTGAATGTTCACAAAAAGCATCTGTGA--ACACTTGAGCTATTGTAACAACCTAGTGAGCTGCTAACATATAAAAGTCAATCAGG---A---AAAA-------------AAAATCATTGCTTAAGCAGTTAAATTAA i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I a score=1096083.000000 s hg38.chr2_KI270774v1_alt 133292 124 + 223625 -----CATTATTTTTAATTGAGTAATCTAACACCTCCCTATGAGCCATACTTTATGGAATTTCAATAAAGACAAACCAACCAT-AACGAATCTGAACACTTTATTAAAGCAATCTTTCCAATCTTCAGTT s panTro5.chr2A 1421073 124 + 111504155 -----CATTATTTTTAATTGAGTGATCTAGCACCTCCCTATGAGCCATACTTTATGGAATTTCAATAAAGACAAACCAACCAT-AACGAATCTGAACACTTTATTAAAGCAATCTTTCCAATCTTCAGTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1370111 124 + 114371477 -----CATTATTTTTAATTGAGTGATCTAGCACCTCCCTATGAGCCATACTTTATGGAATTTCAATAAAGACAAACCAACCAT-AACGAATCTGAACACTTTATTAAAGCAATCTTTCCAATCTTCAGTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1394675 124 + 1464242 -----CATTATTTTTAATTGAGTGATCTAACACCTCCCTATGAGCCATACTTTATGGAATTTCAATAAAGACAAACCAACCAT-AATGAATCTGAACACTTTATTAAAGCAATCTTTCCAATCTTCAGTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1117582 124 + 81552678 -----CATTATTTTTAATTGAGTGATCGAGCACCTCCCTATGAGCCACACTTTATGGAACTTCAATAAAGACAAACCAACCAT-AACTAATCTGAACACTTTATTAAAGCGATCTTTCCAATCTTCAGAT i nomLeu3.chr19 I 5 C 0 s rheMac8.chr13 1446619 125 + 108979918 -----CGTTATTTTTAATTGAGTGATCTAGCACCTCTCTATGAGCCACACTTTATGGAATTTCAATAAAGACCAACCAACCGTAAACGAATCTGAACACTTTATGAAAGCGATCTTTCCAGTCTCCAGAT i rheMac8.chr13 I 5 C 0 s macFas5.chr13 1419053 125 - 111193037 -----CATTATTTTTAATTGAGTGATCTAGCACCTCTCTATGAGCCACACTTTATGGAATTTCAATAAAGACCAACCAACCGTAAACGAATCTGAACACTTTATGAAAGCGATCTTTCCAGTCTCCAGAT i macFas5.chr13 I 5 C 0 s macNem1.NW_012011978v1 1446961 125 + 3644372 -----CATTATTTTTAATTGAGTGATCTAGCACCTCTCTATGAGCCACACTTTATGGAATTTCAATAAAGACCAACCAACCGTAAACGAATCTGAACACTTTATGAAAGCAATCTTTCCAGTCTTCAGAT i macNem1.NW_012011978v1 I 5 C 0 s cerAty1.NW_012000820v1 1401218 124 - 10304083 -----CATTATTTTTAATTGAGTGATCTAGCACCTCCCTATGAGCCACACTTTATGGAATTTCAATAAAGACCAACCAACCAT-AACAAATCTGAACACTTTATGAAAGCAGTCTTTCCAGTCTTCAGAT i cerAty1.NW_012000820v1 I 5 C 0 s chlSab2.chr14 1477907 124 - 107702431 -----CATTATTTTTAATTGAGTGATCTAGCACCTCCCTATGAGCCACACTTTATGGAATTTCAATAAAGACCAACCAACCAT-AACAAATCTGAACACTTTATGAAAGCAATCTTTCCAGTCTTCAGAT i chlSab2.chr14 I 5 C 0 s manLeu1.NW_012103754v1 961329 124 - 2200435 -----CATTATTTTTAATTGAGTGATCTAGCACCTCCCTATGAGCCACACTTTATGGAATTTCAATAAAGACCAACCAACCAT-AACAGATCTGAACACTTTATGAAAGCAATCTTTCCAGTCTTCAGAT i manLeu1.NW_012103754v1 I 5 C 0 s colAng1.NW_012118821v1 1399719 124 - 13651311 -----CATTATTTTTAATTGAGTGATCTAGCACCTCCCTATGAGCCACACTTTATGGAATTTCAATAAAGACCAACCAATTGT-AACGAATCTGAACACTTTATTAAAGCAATCTTTCCAGTCTTCAGAT i colAng1.NW_012118821v1 I 5 C 0 s calJac3.chr14 1398706 119 - 108792865 -----CATTA-TTTTAATTGAGTGATCTAGCACCTCCCTACGAGCCACACTTTATGGAATTTCAAT--AGACAGACCAGCCGT-AAAGAATCCGAACACTCTGTTAAAGCA--CTTTCCGATCTTCAGAT i calJac3.chr14 I 335 C 0 s saiBol1.JH378218 1239236 99 - 7082604 -----CATTA-TTTTTAAT---------------------TGAGCCACACTTTATGGAATCTCAGTAAAGACAGACCAACCAT-GAAGAATCCG-ACACTTTATTAAAGCT--CTTTCCAATCTTCAGAT i saiBol1.JH378218 I 5 C 0 s aotNan1.NW_018513311v1 127022 121 + 287728 -----CATTG-TTTTAATTGAGTGACCTAGCACCTCCCTATGAGTCACACTTTATGGAATTTCAGTAATGACAGACCGACCAT-CAAGAATCCGAACACTTTATGAAAGCA--CTTTCCAATCTTCAGAT i aotNan1.NW_018513311v1 I 5 C 0 s mm10.chr12 90018844 97 - 120129022 -----TGTTA-GTTTGACTGGGTGAAATAAGGCCT--CTGAGAGATGTACTTTGTGGAGTTACAGTAAGGAACAGCTGACTGT-AACAAATCTGTGCA------AAAGGCTG------------------ i mm10.chr12 I 2 C 0 s dasNov3.JH576208 1732252 127 + 4416731 CATTTCATTATTTTTAATTGAGTGAAATACCACCTCCCTACAAGCAGTACTTTATGGAATTTCAATAAAGACAAACCAACTGT-AACCAATCTGAACACTTTATTAAAGCA--CATTCCAATCTTCAAAC i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I a score=1255326.000000 s hg38.chr2_KI270774v1_alt 133416 163 + 223625 GCTGACGTATTGCAGCTGATTATATGCATTACTCTCCCATACATTTTTGCAAATTGAGCCACTTTGGTGTGCTGGAGATTAATGAAG--TATTAATAACAGAATTATTCTCCCCTTATGGTCCCTGCAGACATAGAGAAGTAACCATG-TCCC--CAAGCCTCCTGCC---- s panTro5.chr2A 1421197 163 + 111504155 GCTGATGTATTGCAGCTGATTATATGCATTACTCTCCCATACATTGTTGCAAATTGAGCCACTTTGGTGTGCTGGAGATTAATGAAG--TATTAATAACAGAATTATTCTCCCCTTAAGGTCCCTGCAGACATAGAAAAGTAACCATG-TCCC--CAAGCCTCCTGCC---- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1370235 163 + 114371477 GCTGATGTATTGCAGCTGATTATATGCATTACTCTCCCATACATTGTTGCAAATTGAGCCACTTTGGTGTGCTGGAGATTAATGAAG--TATTAATAACAGAATTATTCTCCCCTTAAGGTCCCTGCAGACATAGAAAAGTAACCATG-TCCC--CAAGCCTCCTGCC---- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1394799 163 + 1464242 GCTGACGTATTGCAGCTGATTATATGCATTACTCTCCCATACATTTTTGCAAATTGAGCCACTTTGGTGTGCTGGAGATTAATGAAG--TATTAATAACAGAATTATTCTCCCCTTATGGTCCCTGCAGACATAGAGAAGTAACCATG-TCCC--CAAGCCTCCTGCC---- i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1446744 163 + 108979918 GCTGATGTGTTGCAGCTAATTATATGCATTACTCTCCCTCACATTTTTGCAAATTGAGCCACTTTGGTGTGCTGGAGATTAACAAAG--TATTAATAATAGAATTATTCTCCCCTTACGATCCTTGTAGACATAGAGAAGTAACCATG-TCCC--CAAGCCACCTGCC---- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1419178 163 - 111193037 GCTGATGTGTTGCAGCTAATTATATGCATTACTCTCCCACACATTTTTGCAAATTGAGCCACTTTGGTGTGCTGGAGATTAACAAAG--TATTAATAATAGAATTATTCTCCCCTTACGATCCTTGTAGACATAGAGAAGTAACCATG-TCCC--CAAGCCACCTGCC---- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1447086 163 + 3644372 GCTGATGTATTGCAGCTAATTATATGCATTACTCTCCCACACATTTTTGCAAATTGATCCACTTTGGTGTGCTGGAGATTAACAAAG--TATTAATAATAGAATTATTCTCCCCTTACGATCCTTGTAGACATAGAGAAGTAACCATG-TCCC--CAAGCCACCTGCC---- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1401342 163 - 10304083 GCTGATGTATTGCGGCAAATTATATGCATTACTCTCCCACACATTTTTGCTAATTGAGCCACTTTGGTGTGCTGGAGATTAACGAAG--TATTAATAATAGAATTATTCTCCCCTTACGATCCTTGCAGACATAGAGAAGTAACCATG-TCCC--CAAGCCTCCTGCC---- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1478031 154 - 107702431 GCTGATGT---------AATTATATGCATTACTCTCCCACACATTTTTGCAAATTGAGCCACTTTGGTGTGCTGGAGATTAACAAAG--TATTAATAATAGAATTATTCTCCCCTTACGATCCTTGCAGACATAGAGAAGTAACCATG-TCCC--CAAGCCACCTGCC---- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 961453 163 - 2200435 GCTGATGTATTGCGGCAAATTATATGCATTACTCTCCCACACATTTTTGCTAATTGAGCCACTTTGGTGTGCTGGAGATTAACGAAG--TATTAATAATAGAATTATTCTCTCCTTACGATCCTTGCAGACAGAGAGAAGTAACCATG-TCCC--CAAGCCTCCTGCC---- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1399843 163 - 13651311 GCTGACGTCTTGCAGCTAATTATATGCGTTACTCTCCCACACATTTTTGCAAATTGAGCCACTTTGGTGTACTGGAGATTAACAAAG--TATTAATAATAGAGTTATTCTCCCCTTACGATCCTTGCAGACATAGAGAAGTAACCATG-TCCC--CAAGCCTCCTGCC---- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1398825 159 - 108792865 GCTGACGTGTTGCCGCTGATTATCTGCATTACTCTCCCATGCAGTTCTGCAAAGGGAGCCACTTTGGTGTGCTGGAGACCGATGACG--TATTAATAATAGAGCTCTTCTCCCTCTTCGGTCCCCAGGGACATACA----CAGCCATG-TCCC--CAAGCCTCGTGCC---- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1239335 159 - 7082604 GCGGACGTGTTACAGCTCATTATATGCGTTACTCTCCCATACGGTTTTGCAAAGTGAGCCACTTTGGTGTGCTGGAGATTGATGAAG--GATCAATAACACAACTATTCTCCCTTGGGGGTCCCCACGGACACACA----CAACCGTG-TCCC--CAAGCCCCATGCC---- i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 127143 148 + 287728 GCTGACGTGTTGCAGCTAATTACATGCATTCCTCTCCCAAACAGTTTTGCAAAGTGAGC-----------GCTGGAGACTGATGAAG--TGTTAATAATAGAACTGTTCTCCCTTTGCAGTCCCCAGGGACACACA----CAACCATG-TCCC--CAGGCCTCGGGCC---- i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90018941 151 - 120129022 GCTGCCTTCGTGTTGCTAATTAAAAGCAGTACTC---------------CAAATTAAGCCAA-CTGGTGGGCTAGATGTCAACGAAGTATATTAATAGTAGAATTGTTTTCCGCTTGCTGTCTCTCCAGACGTACAAAAATTATCAAG-TCTCTTTGGAGCATTGGCC---- i mm10.chr12 C 0 I 1 s dasNov3.JH576208 1732379 168 + 4416731 GTTGACTTATTGTAGCTAATTAAACGCATTACTGTCCCATATAGTTTTGCAAATTGAGCCACTTTGGTGTACTGGAGATCAATGAAG--TATTAATAATAGAATAATTCTCCACTTACTGCCCCTACAAATGTACAAAAGTAACCATGTTTCC--CTGGAGCATTGCCTCCA i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e nomLeu3.chr19 1117706 0 + 81552678 C a score=636338.000000 s hg38.chr2_KI270774v1_alt 133579 84 + 223625 GCTGCTGACCACTCATCATCCAATGTGTCCTGGATGAGGTAGCAA-C-TGGTGCACAACA-------GTAAGAATA-AAAGCTCCTCTCCTCTA s panTro5.chr2A 1421360 84 + 111504155 GCTGCTGACCACTCATCATCCAATGTGTCCTGGATGAGGTAGCAG-C-AGGTGCACAACA-------GTAAGAATA-AAAGCTCCTCTCCTCTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1370398 84 + 114371477 GCTGCTGACCACTCATCATCCAATGTGTCCTGGATGAGGTAGCAG-C-AGGTGCACAACA-------GTAAGAATA-AAAGCTCCTCTCCTCTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1394962 82 + 1464242 GCTGCTGACCGCTCATCATCCAA--TGTCCTGGATGAGGTAGCAG-C-AGGTGCACAACA-------GTAAGAATA-AAAGCTCCTCTCCTCTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1117706 65 + 81552678 GCTGCTGACCACTCATCCTC------------------GT-GCAG-C-AGGTGCACGACA-------GTAGGAATA-AAAGCTCCTCTCCTCTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1446907 84 + 108979918 GCTGCTGACCACTCATCCTCGAAAGTGTCCCAGAGGAGGTAGCAG-C-AGGTGCACGACA-------GTAGGAATA-AAACCTCCTCTCCTCTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1419341 84 - 111193037 GCTGCTGACCACTCATCCTCGAAAGTGTCCTAGAGGAGGTAGCAG-C-AGGTGCACGACA-------GTAGGAATA-AAACCTCCTCTCCTCTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1447249 84 + 3644372 GCTGCTGACCACTCATCCTCGAAAGTGTCCTAGATGAGGTAGCAG-C-AGGTGCACGACA-------GTAGGAATA-AAACCTCCTCTCCTCTA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1401505 84 - 10304083 GCTGCTGACCGCTCATCCTCGAAAGTGTCCTAGATGAGGTAGCAG-C-AGGTGCACGACA-------GTAGGAGTA-AAACCTTCTCTCCTCTA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1478185 84 - 107702431 GCTGCTGACCACTCATCCTCGAAAGTGTCCTAGATGAGGTAGCAG-C-AGGTGCACGACA-------GTAGGAATA-AAACCTCCTCTCCTCTA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 961616 84 - 2200435 GCTGCTGACGGCTCATCCTCGAAAGTGTCCTAGATGAGGTAGCAG-C-AGGTGCACGACA-------GTAGGAGTA-AAACCTTCTCTCCTCTA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1400006 84 - 13651311 GCTGCTGACCACTCATCCTCGAAAGTGTCCTAGATGAAGTAGCAG-C-AGGTACACGACA-------GTAGGAATA-AAAGCTCCTCTCCTCTA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1398984 85 - 108792865 GTTGCTGACCACTCATCCTTAGATGTGCCCTAGGTGACGCGGCAG-C-AGGTCCGTGACA-------GTAAAAGAATAAAGCTCCTCTCCCCCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1239494 84 - 7082604 GTTGCTGACCACTCATCCTTAGATGTGCCCTGGGTGAAGCGGCAG-C-AGGTACGTGACA-------GTAAAAGAATAAAGCTCCTCT-CCCCA i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 127291 82 + 287728 GTCGCGGACCACTCATCCTCAGATGTGCCCTAGGTGAA---GCAG-C-AGGTACCTGACA-------GTAAAAGAATACAGCTCCTCTCCGCTA i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90019093 91 - 120129022 GTTACTAAGTAGTCCTCCTGGAATGT-TCTTAGGTGAAGCAGCAGAC-TTGTAAACAATGCAGACTTGTAAACAAT-GAAGCCTTTCCCCTCCA i mm10.chr12 I 1 I 2917 s dasNov3.JH576208 1732547 84 + 4416731 AATGCTAACTAGTCACTCTAGAATGGTTCCTAGACAAAGTAGCAG-TGATGTGAAAGATA-------GCAGTAAT--AAAGTTCCTTTTCTCTA i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I a score=4300046.000000 s hg38.chr2_KI270774v1_alt 133663 532 + 223625 ATGTACGGAGCTG---CGTGGTGGCCTT-AGAGACTTTTAAACTGGA-AGAGTCTCAGCTCTTCAGTCTACCTCAAGGACAAAA-TGGATCTTTCCTTCACAAA--------TGTTGCCCAGGTTACAAACAGTTCTTAGTAGAACCTTAGTCCTTTCATTCCTGTGCAGAACATCTAAATCGGTCACATTTAA------------TACGAATGACTAATGTATGTTATAACCATAAAGGCAATGGTAATTTA-TGACAAAAC-----CACTAATTTTTAAATATTTATATTCCCAAACACTCCAAATGTTTTAAAAAGTTATTTATCTTGTCACGATTCTTGTAGACTTCACTCCTTGTATTTTTTAAGTGCGTACATATCAGATACATGGGAGGATTTTCAAAGCCTGCATCCTAGT------CACGCCTGACTCTTTTGTCATGTGCCTTGCAAAGCC-----TCCCAATACCAGTTGTCCATGATGCAGCTTCAGACTCTGCAGAC-TCAGCCCTGGTTGTGTTGC-ATGACTCTGCAGCTGCCACACACAGAACCTCCGTGCTGGTTGTTCC s panTro5.chr2A 1421444 532 + 111504155 ATGTACGGAGCTG---CGTGGTGGCCTT-AGAGACTTTTAAACTGGA-AAAGTCTCAGCTCTTCAGTCTACCTCAAGGACAAAA-CGGATCTTTCCTTCACAAA--------TGTTGCCCAGGTTACAAACAGTTCTTAGTAGAACCTTAGTCCTTTCATTCCTGTGCAGAACATCTAAATCGGTCACATTTAA------------TACGAATGACTAACGTATGTTATAACCATAAAGGCGATGGTAATTTA-TGACAAAAC-----CACTAATTTTTAAATATTTATATTCCCAAACACTCCAAATGTTTTTAAAAGTTATTTATCTTGTCACGATTCTTGTAGACTTCACTCCTTGTATTTTTTAAGTGCGTACATATCAGATACATGGGAGGATTTTCAAAGCCTGCATCCTAGT------CACGCCTGACTCTTTTGTCATGTGCCTTGCAAAGCC-----TCCCAATACCAGTTGTCTATGATGCAGCTTCAGACTCTGCAGAC-TCAGCCCTGGTTGTGTTGC-ACGACTCTGCAGCTGCCACACACAGAACCTCAGTGCTGGTTGTTCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1370482 532 + 114371477 ATGTACGGAGCTG---CGTGGTGGCCTT-AGAGACTTTTAAACCGGA-AAAGTCTCAGCTCTTCAGTCTACCTCAAGGACAAAA-CGGATCTTTCCTTCACAAA--------TGTTGCCCAGGTTACAAACAGTTCTTAGTAGAACCTTAGTCCTTTCAGTCCTGTGCAGAACATCTAAATCGGTCACATTTAA------------TACGAATGACTAACGTATGTTATAACCATAAAGGCGATGGTAATTTA-TGACAAAAC-----CACTAATTTTTAAATATTTATATTCCCAAACACTCCAAATGTTTTTAAAAGTTATTTATCTTGTCACGATTCTTGTAGACTTCACTCCTTGTATTTTTTAAGTGCGTACATATCAGATACATGGGAGGATTTTCAAAGCCTGCATCCTAGT------CACGCCTGACTCTTTTGTCATGTGCCTTGCAAAGCC-----TCCCAATACCAGTTGTCCATGATGCAGCTTCAGACTCTGCAGAC-TCAGCCCTGGTTGTGTTGC-ACGACTCTGCAGCTGCCACACACAGAACCTCAGTGCTGGTTGTTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1395044 533 + 1464242 ACGTACGGAGCTG---CGTGGTGGCCTT-AGAGACTTTTAAACCGGA-AGAGTCTCAGCTCTTCAGTCTACCTCAAGGACAAAA-CAGATCTTTCCTTCACAAA--------TGTTGCCCAGGTTACAAACAGTTCTTAGTAGAACCTTAGTCCTTTCATTCCTGTGCAGAACATCTAAATCGGTCGTATTTAA------------TACGAATGACTAATGTATGCTATAACCATAAAGGCAATGGTAATTTA-TGACAAAACTA---CACTAATTTTTAAATATTTATATTCCCAAACACTCCAAATGTTTTAAAAAGTTATTTATCTTGTCATGATTCTTGTAGACTTCACTCCTTGTATTTTTTAAGTGCGTACACGTCAGATA-GTGGGAGGATTTTCAAAGCCTGCACCCTAGT------CACGCCTGACTCTTTTGTCATGTGCCTTGCAAAGCT-----TCCCAATACCAGTTGTCCATGATGCAGCTTCAGACTCTGCAGAC-TCAGCCCTGGTTGTGTTGC-ATGACTCTGCAGCTGCCACACACAGAACCTCAGTGCTGGTTGTTCG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1117771 534 + 81552678 ATGTCTGGAGCTG---CGT-GTGGCCTT-AGAGACTTTTAAACTGGA-AGAGTCTCCGCTCTTCAGTCTACCTCAAGGACAAAA-CGGATCTTTCCTTCACAAA--------TGTTGCCCAGGTTACAAACAGTTCTTAGTAGAACCTTAGTCCTTTCATTCCTGTGCAGAACAACTAAATCGGTCATATTTAA------------TACAAATGACTAATGTATGTTATAACCATAAAGGCGATGGTAATTTAGTGACAAAACTA---CACTAATTTTTAAATATTTATATTCCTAAACACTCCAAATGTTTTAAAATGTTATTTATCTTGTCACGATTCTTGTAGACTTCACTCCTTGTATTTTTGAAGTGCGTACACATCAGATACATGGGAGGGTTTTCAAAGCCTGCATCCTAGT------CACGCCTGACTCTTTTGTCATGTGCCTTGCAAAGCC-----TCCCAATACCAGTTGTCCATGATGCAGCTTCAGACTCTGCAGAC-TCAGCCCTGATTGTATCGC-GTGACTCTGCAGCTGCCACACACGGAACCCCAGTGCTGGTTGTTTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1446991 534 + 108979918 ATGTCCGGAGCTG---CACGGTGGCCTT-AGAGGCTTTTAAACCGGA---AGTCTCAGCTCTTCAGTCTACCTCAAGGACAAAA-CGAATCTTTCCTTCACACA--------TGTTGCCCAGGTTACAAACAGTTCTGAGCAGAACCTTGGTCCCTTCATTCCTGTGCAGAACATCTAAATCAGTCACATTTAA------------TACGAATGACTAATGTATGTTATAACCATAAAGGCAATGGTAACTTAGTGACAAAACCA--CAACTAATTTTTAAATATTTATATTCCCAAACACTCCAAATGTTTTAAAAAGTTGCTTGTCTTGTCATGATTCTTGTAGACTTCACTCCTTGTATTTTCTAAGTGGGTACACATCAGATACATGGAAGGATTTTCAAGGCCTGCATCCTGGT------CACGCCTGAGTCTTTCGTCGTGTGCCTTGCAAAGTC-----TTCCAGTACCAGTTGTCCACGATGCAGCTTCAGACTCTGCAGAC-TCAGCCCTGCTTGTGTTGC-ATGACTCTGCAGCTGCCACACACAGAACCCCAGTGCCGGTTATTCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1419425 534 - 111193037 ATGTCCGGAGCTG---CACGGTGGCCTT-AGAGGCTTTTAAACCGGA---AGTCTCAGCTCTTCAGTCTACCTCAAGGACAAAA-CGAATCTTTCCTTCACACA--------TGTTGCCCAGGTTACAAACAGTTCTGAGCAGAACCTTGGTCCCTTCATTCCTGTGCAGAACATCTAAATCAGTCACATTTAA------------TACGAATGACTAATGTATGTTATAACCATAAAGGCAATGGTAACTTAGTGACAAAACCA--CAACTAATTTTTAAATATTTATATTCCCAAACACTCCAAATGTTTTAAAAAGTTGCTTATCTTGTCATGATTCTTGTAGACTTCACTCCTTGTATTTTCTAAGTGGGTACACATCAGATACATGGAAGGATTTTCAAAGCCTGCATCCTGGT------CACGCCTGACTCTTTCGTCGTGTGCCTTGCAAAGTC-----TTCCAGTACCAGTTGTCCACGATGCAGCTTCAGACTCTGCAGAC-TCAGCCCTGCTTGTGTTGC-ATGACTCTGCAGCTGCCACACACAGAACCCCAGTGCCGGTTATTCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1447333 534 + 3644372 ATGTCCGGAGCTG---CACGGTGGCCTT-AGAGGCTTTTAAACCGGA---AGTCTCAGCTCTTCAGTCTACCTCAAGGACAAAA-CGAATCTTTCCTTCACACA--------TGTTGCCCAGGTTACAAACAGTTCTGAGCAGAACCTTGGTCCCTTCATTCCTGTGCAGAACATCTAAATCAGTCACATTTAA------------TACGAATGACTAATGTATGTTATAACCATAAAGGCAATGGTAACTTAGTGACAAAACCA--CAACTAATTTTTAAATATTTATATTCCCAAACACTCCAAATGTTTTAAAAAGTTGCTTATCTTGTCATGATTCTTGTAGACTTCACTCCTTGTATTTTCTAAGTGGGTACACATCAGATACATGGAAGGATTTTCAAAGCCTGCATCCTGGT------CACGCCTGACTCTTTCGTCGTGTGCCTTGCAAAGTC-----TTCCAGTACCAGTTGTCCACGATGCAGCTTCAGACTCTGCAGAC-TCAGCCCTGCTTGTGTTGC-ATGACTCTGCAGCTGCCACACACACAACCCCAGTGCCGGTTATTCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1401589 531 - 10304083 ATGTCCGGAGCTG---CATGGTGGCCTT-AGAGGCTTTTAAACCGGA---AGTCCCAGCTCTTCAGTCTACCTCAAGGACAAAA-CGAATCTTTCCTTCACACA--------TGTTGCCCAGGTTACAAACAGTTCTGAGCAGAACCTTGGTCCCTTCATTCCTGTGCAGAACATCTAAATCAGTCACATTTAA------------TACGAATGACTAATGTATGTTATAACCATAAAGGCAATGGTAACTTAGTGACAAAACCA--CAACTAATTTTTAAATAGTTATATTCCCAAACACTCCAAATGTTTTAAAAAGT---TTATCTTGTCATGATTCTTGTAGACTTCACTCCTTGTATTTTCTAAGTGCGTACACATCAGATACATGGAAGGATTTTCAAAGCCTGCATCCTGGT------CATGCCTGACTCTTTCGTCGTGTGCCTTGCAAAGCC-----TTCCAGTACCAGTCGTCCACGATGCAGCTTCAGACTCTGCAGAC-TCAGCCCTGGTTGTGTTGC-ATGACTCTGCAGCTGCCACACACAGAACCCCAGTGCCAGTTATTCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1478269 534 - 107702431 ATGTCCGGAGCTG---CATGGTGGCCTT-AGAGGCTTTTAAACCGGA---AGTCTCAGCTCTTCAGTCTACCTCAAGGACAAAA-CGAATCTTTCCTTCACAGA--------TGTTGCCCAGGTTACAAACAGTTCTGAGCAGAACCTTGGTCCCTTCACGCCTGTGCAGAACATCTAAATCAGTCACATTTAG------------TACGAATGACTAATGTATGTTATAACCATAAAGGCAATGGTAACTTAATGACAAAACCA--CAACTAATTTTTAAATATTTATATTCCCAAACACTCCAAATGTTTTAAAAACTTGTTTATCTTGTCATGATTCTTGTAGACTTCACTCCTTGTATTTTCTAAGTGCGTACACATCAGATACATGGAAGGATTTTCAAAGCCTGCATCCTGGT------CACGCCTGACTCTTTCGTCGTGTGCCTTGCAAAGCC-----TTCCAGTACCAGTTGTCCACGATGCAGCTTCAGACTCTGCAGAC-TCAGCCCTGCTTGTGTTGC-ATGACTCTGCAGCTGCCACACACAGAACCCCAGTGCCGGTTATTCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 961700 533 - 2200435 ATGTCCGGAGCTG---CACGGTGGCCTT-AGAGGCTTTTAAACCGGA---AGTCCCAGCTCTTCAGTCTACCTCAAGGACAAAA-GGAATCTTTCCTTCGCACA--------TGTTGCCCAGGTTACAAACAGTTCTGAGCAGAACCTTGGTCCCTTCATTCCTGTGCAGAACGTCTAAATCAGTCACATTTAA------------TACGAATGACTAATGTATGTTATAACCAT-AAGGCAATGGTAACTTAGTGACAAAACCA--CAACTAATTTTTAAATATTTATATTCCCAAACACTCCAAATGTTTTAAAAAGTTGCTTATCTTGTCATGATTCTTGTAGACTTCACTCCTTGTATTTTCTAAGTGCGTACACATCAGATACATGGAAGGATTTTCAAAGCCTGCACCCTGGT------CACGCCTGACTCTTTCGTCGTGTGCCTTGCAAAGCC-----TTCCAGTACCAGTTGTCCACGATGCAGCTTCAGACTCTGCAGAC-TCAGCCCTGGTTGTGTTGC-ATGACTCTGCAGCTGCCACACACAGAACCCCAGTGCCAGTTATTCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1400090 539 - 13651311 ATATCCGGAGCTG---CATGGTGGCCTT-AGAGACTTTTAAACTGGA---AGTCTCAGCTCTTCAGTCTACCTCAAGAGCAAAA-CGAATCTTTCCTTCACAAA--------TGTTGCCCAGGTTACAAACAGTTCTGAGCAGAACCTTGGTCCCTTCATTCCTATGCAGAACATCTAAATCAGTCATATTTAA------------TACGAATGACTAATGTATGTTATAACCATAAAGGCAATGGTAACTTAGTGACAAAACCG--CAACTAATTTTTAAATATTTATATTCCCAAACATTCCAAATGTTTTAAAAAGTTGTTTATCTTGTCATGATTCTTGTAGACTTCACTCCTTATATTTTCTAAGTGTCTACATATCAGATACATGGGAGGATTTTCAAAGCCTGCATCCTAGT------CATGCCTGACTCTTCCGTCCTATGCCTTGCAAAGGCTTCCATTCCAATACCAGTTGTCCACGATGCAGCTTCAGACTCTGCAGAC-TCAGCCTTGGTTGTGTTGC-TTGACTCTGCAGCTGCCACACACAGAACCCCAGTGCCAGTTATTCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1399069 503 - 108792865 AGGCCAGGAGCTG---CATGGCTGCCTTAGGAGACTTTCAGACCGGA-AGGGTCTCAGCTCTCCAGTCTGCCTCAAGGACAAAA-CGGATCTTG-CTTCACAAT--------CGTTGCCCGGGTGACAAACAGTCCTTGGCAGAACCTCGGTCCTTTCATTCCTATGCAGAACATCTGAATCTGTCAT-CGTAA------------T----ATGACTAAGTTATGTCACAAGCATAAAGGTGATGGCGACTTAGAGACAAAAC-----AACTATGTTTTGAATATTCATATTCCCAAGCAGGCCAAA-GGTTTAAAAAGTTACTTATCTTGTCATGATTCTTGCAGACTCCGCTCCTTGTATGGTCTGAGTGTGTACACAGCGGATTCATGAAGGGATTTTCCAAGCCCACATCCTAAT------CACGCCCGACGCTTTTGTC---TGCCTTGCAAAGCC-----TTCCAGTGCCAGCTG-CTGTGATGCACCCTCAGCCTCTGCAGACTTCAGGC----------------------GCGGCCGCCACACGCAGAACCCCAGAGCTGGTTATTTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1239578 514 - 7082604 AGGCCAGGAGTTGCATCATGGCCGCCTTAGGGGACTTTTAGACCTGC-AGAGTCTCCGCTCTCCAGCCTACCTCAGGGACAAAG-TGGATCTTGCCTTCACAAA--------CGTTGCCCAGGTTACAGACAGTTCTTGGTGGAAACTTGGTCCTTTCGTTCCTGTGCAGAACATCTAAATCAGTCAT-TTTAA------------TACAAATGACTAAGTTACGTTATAAGCATAAAGCTGATGTTAACTTAGAGACAAAAC-----AGCTAAGTTTTGAATATTTATATTCCCAAGCATACCAAATGTTTTAAAAAGTTATTTGTCTTGTCATGATTCTTGCAGACTTCCCTCCTTGTATTTTCTGAGTGTGTACGCAGCGGGTTCATTAAGGGATTTTCAAAGCCTACATCCTAAT------CATGCCCGACACGTTTGTCACGTGCCTTGCAATGCT-----TTCCAGTGCCAGCTG-CCACGATGCACTCTCAACCTTTGCAGAC-TCACGC----------------------ACAGCCACTGCACACAGAACCCCAGAGCTGGCTATTTC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 127373 508 + 287728 AGGCCAGGAGCTG---CATGGCCGCCTT-GGAGACTTTTGGACCGGA-AGAGTCTCAGCTCTCCAGTCTACCTCAAGGACAAAA-CGGATCTTGCCTTCACAAA--------CGTTGCCCAGGTTACAAACAGCTCCTGACAGAAGCTTGGTCCTTTCGTTCCTGTGCAGAACATCTAAATCAGTGAG-TTTAA------------TACGAACGACTAAGTGACGTTATAAGCATAAAGGCGATGGTAACTCAGAGACAAAAC-----GACTGAGTTTTGAATATTTATATCCCCCAGCATGCCAAA-GGTTTTAAAAGTTACTTATCTTGTCATGATCCTTGCAGACTTCACTCCTTGTGTTTTCTGAGTGTGTACACAGCGGATTCATGAAGGGATCTT-AAAGCCTACATCCTAAT------CACGCCCGGCGCTTTCGCCACGTGCCTTGCAAAGCC-----TTCCACTGCCAGCTG-CCATGATGCACCCTCCACCTCTGCAGAC-TCACGC----------------------GCAGCCACCACACACAGAACGCCAGAGCGGGTTATTTC i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1732631 560 + 4416731 ATATCAAGAACAA---TGTAGTGTCATTAAGAGACTTGCAAATGGAACAAAGCATAACTTGCTCAGTTATTGCCAAGGCCAGACTCCAGTCTTGCCTTTAAATATGATCCTTTGTTGCTCAGATAACAAATCGTTCTCAGC---ATTGTGTTCCTTTCATTCTTATGCCAAACATCTAACTCAATCATGTTTAGCTAATAATAAGCTAATAATGATTAATGTGTGTTATATCCAAAAGAGTGACAATAACTGAGTCTTAAAACAAATCAGCTAATTTTTAA--AATTATATTTCCAAACACTCCAAAATTTTTAAAAAATCATTTAGTGTGTCATGGTTCTTATAGACTTCAGTTCCTTCTTTTTCT--TTGTCTACACAGCAAACACATGAACGAATTTTT-AAGTCTACACCCCAGTATTTTCCAGTTCAGATTATTTTGCCATGTGATGCCCAAAGCC-----CTCTGATACAACGTGTCTTTCACCTCACTTCAAATTCAGCAGTC-TCCCTTCTCATTCCCTTGCGATGACTCTGTGACCACTAAACAAATACCCCAAAAGCTGATTATTCC i dasNov3.JH576208 C 0 I 5844 e mm10.chr12 90019184 2917 - 120129022 I e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I a score=779040.000000 s hg38.chr2_KI270774v1_alt 134195 119 + 223625 CACACGGGCGTGACTGACAGATACCAATGGAACCCGGATATCATGACAATGTTAGACCCAAAACAATCTGTATTTATTTGTAACAAAAGGAACCTAC-TTTTTTCC-AC-AAAAAAATTCTA s panTro5.chr2A 1421976 119 + 111504155 CACACGGGCGTGACTGACAGATACCAATGGAACCCGGATATCATGACAATGTTAGACCCAAAACAATCTGTATTTATTTTTAACAAAAGGAACCTAC-TTTTTTCC-AC-AAAAAAATTCTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1371014 120 + 114371477 CACACGGGCGTGACTGACAGATACCAATGGAACCCGGATATCATGACAATGTTAGACCCAAAACAATCTGTATTTATTTTTAACAAAAGGAACCTAC-TTTTTTCC-ACAAAAAAAAATCTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1395577 120 + 1464242 CACACGGGCGTGACTGACAGATACCAATGGAACCCGGATATCATGACAATGTTAGACCCAAAACAATCTGTATTTATTTTTAACAAAAGGAACCTACTTTTTTTCC-AC-AAAAAAATTCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1118305 115 + 81552678 CACACGGGCGTGACTGACAGATACCAATGGAACCCGGATATCATGACAATGTTAGACCCAAAACAATCTGTATTTATTTTTAAC-AAAGGAACC----TTTTTTCC-AC-AAAAAAATTCTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1447525 119 + 108979918 CACA-GGGCTTGACTGACAGACACCAACGGAACCCGGATATCATGACAATGTTAGACCCAAAACAATCTGTATTTATTTTTAACAAAAGGAACCTAC-TTTTTTCCAAC-AAAAAATTTCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1419959 119 - 111193037 CACA-GGGCTTGACTGACAGACACCAATGGAACCCAGATATCATGACAATGTTAGACCCAAAACAATCTGTATTTATTTTTAACAAAAGGAACCTAC-TTTTTTCCAAC-AAAAAATTTCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1447867 119 + 3644372 CACA-GGGCTTGACTGACAGACACCAATGGAACCCGGATATCATGACAATGTTAGACCCAAAACAATCTGTATTTATTTTTAACAAAAGGAACCTAC-TTTTTTCCAAC-AAAAAATTTCTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1402120 119 - 10304083 CACA-GGGCTTGACTGACAGACACCAATGGAACCCAGCTATCATGACAATGTTAGACCCAAAACAATCTGTATTTATTTTTAACAAAAGGAACCTAC-TTTTTTCCAAC-AAAAAGTTTCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1478803 119 - 107702431 CACA-GGGCTTGACTGACAGACACCAATGGAACCCGGATATCATGACAATGTTAGACCCAAAACAATCTGTATTTATTTTTAACCAAAGGAACCTAC-TTTTTACCAAC-AAAAAATTTCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 962233 120 - 2200435 CACA-GGGCTTGACTGACAGATACCAATGGAACCCAGATATCATGACAATGTTAGACCCAAAACAATCTGTATTTATTTTTAACAAAAGGAACCTAC-TTTTTTCCAACAAAAAAATTTCTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1400629 118 - 13651311 CGCA-GGGCTTGACTGACAGATACCAATGG-ACCCAGATATCATGACAAGGTTAGACCCAAAACAATCTGTATTTATTTTTAACAAAAGGAACCTAT-TTTTTTCCAAC-AAAAAATTTCTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1399572 107 - 108792865 CACAGAGCCTTGACGGGCAGATGCCGGTGGAACCCTGATGTCATGACCACATTAGA-CCAAACCAAACTG----------TAAC-AAAGGAGCCTCC-TGTATTACAAC-AAAAAA-TTCTA i calJac3.chr14 C 0 I 2 s saiBol1.JH378218 1240092 105 - 7082604 CACACAGCCCTGACCGACAGATGCCAGTAGAGCCCTGGTGTCATGACCATGTCAGA-CCAAACCAAAC------------TAAC-AAAGGAGACTAC-TGTATTAGAAC-AAAAAA-TTCTA i saiBol1.JH378218 C 0 I 2 s aotNan1.NW_018513311v1 127881 107 + 287728 CACACCGCCTTGACCGACGAATGCCAGTGGAACCCCGATGTCATGACCGTGTTAGA-CCAAACCGAACCG----------TAAC-GAAGGAGCCTAC-TGAATTACAAC-AAAAAA-TTCTA i aotNan1.NW_018513311v1 C 0 I 2 e mm10.chr12 90019184 2917 - 120129022 I e cebCap1.NW_016107827v1 1323070 262 + 1864846 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1733191 5844 + 4416731 I a score=7188556.000000 s hg38.chr2_KI270774v1_alt 134314 826 + 223625 TTTTTTTCTCTTTGAATTGA-CTTTTATATTCTAATTCTCTCATATTTCCTTCCAAATGCAGAATAATTTATGCCTTATAAATTGAGCCATTTTCTTCCAAATGTAGAATATTTTATACTTGAGAAATCCTTTATTTTTAATAAG-TTTTACATATTTCTT-----TACCTATCCTCTACAGATATGTATGCTCATGTTATATATTTGATACATTCATTTATATATTCTTCACATTCATATAGTCTTACCATGCATTTATATACTTGAATATGTATTTTATTTTGCATGTTAC-TTTTtatgtattttataaatttaaatttcatatttag-aaaatgttcagtgagcacaagggcctcagtgttcattgttttcttcaagattgagttattttttacacattattagaacac----gatttaataagcacggatctatgacagatgttggtaattattatgcatagagataaatatttattggaa-ttagtttattgatgagatgggtggagtttcagttagttccttcatcagttggctgaacatcacctgtGGGCCAAGGGGCCATGCACCCTGGTTACCCGAGATCCTTCCTATTTATGCCTTCTGTCCCAG-GAAATTATTAATAACTAATAGTGCTCCTGTCTCCTCAGAAGTATTCCACTTTGGTTAGGAATTATACGGTTGCCCTACATACTATAGatgagacagttcagcagcaaccctgtgattatttttacctttgcagatggaaggtgcctagaaacctgctcctgtgactatgtcgctgggaacagttttgccataggaatgccatctggccctcaaaactccttctg s panTro5.chr2A 1422095 826 + 111504155 TTTTTTTCTCTTTGAATTGA-CTTTTATATTCTAATTCTCTCATATTTCCTTCCAAATGCAGAATAATTTATGCCTTATAAATTGAGCCATTTTCTTCCAAATGTAGAATATTTTATACTTGAAAAATCCTTTATTTTTAATAAG-TTTTACATATTTCTT-----TACCTATCCACTACAGATATTTATGCTCATGTTATATATTTGATACATTCATTTATATATTCTTCACATTCATATAGTCTCACCATGCATTTATATATTTGAATATGTATTTTATTTTGCATGTTAC-TTTTtatgtattttataaatttaaatttcatgtttag-aaaatgttcagtgagcacaagggcctcagtgttcattgttttcttcaagattgagttattttttacacattattagaacac----gatttaataagcaaggatctatgacagatgttggtaattattatacatagagataaatatttattggaa-ttagtttattgatgagatgggtggagtttcagttagttccttcatcagctggctgaacatcacctgtGGGCCAAGGggccatgcaccctggttacccgagatccttcctatttatgccttctatcccag-gaaattattaataactaatagtgctcctgtctcctcaaaagtattccactttagttaggaattatacggttgccctaCATACTATAGatgagacagttcagcagcaaccctgtgattatttttacctttgcagatggaaggtgcctagaaacctgctcctgtgactatgtcgctgggaacagttttgccataggaatgccatctggccctcaaaactccttctg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1371134 826 + 114371477 TTTTTTTCTCTTTGAATTGA-CTTTTATATTCTAATTCTCTCATATTTCCTTCCAAATGCAGAATAATTTATGCCTTATAAATTGAGCCATTTTCTTCCAAATGTAGAATATTTTATACTTGAAAAATCCTTTATTTTTAATAAG-TTTTACATATTTCTT-----TACCTATCCACTACAGATATTTATGCTCATGTTATATATTTGATACATTCATTTATATATTCTTCACATTCATATAGTCTCACCATGCATTTATATATTTGAATATGTATTTTATTTTGCATGTTAC-TTTTtatgtattttataaatttaaatttcatgtttag-aaaatgttcagtgagcacaagggcctcagtgttcattgttttcttcaagattgagttattttttacacattattagaacac----gatttaataagcaaggatctatgacagatgttggtaattattatgcatagagataaatatttattggaa-ttagtttattgatgagatgggtggagtttcagttagttccttcatcagctggctgaacatcacctgtGGGCCAAGGggccatgcaccctggttacccgagatccttcctatttatgccttctatcccag-gaaattattaataactaatagtgctcctgtctcctcaaaagtattccactttagttaggaattatacggttgccctaCATACTATAGatgagacagttcagcagcaaccctgtgattatttttacctttgcagatggaaggtgcctagaaacctgctcctgtgactatgtcgctgggaacagttttgccataggaatgccatctggccctcaaaactccttctg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1395697 829 + 1464242 -TTTTTTCTCTTTGAATTGA-CTTTTATATTCTAATTCTCTCATATTTCCTTCCAAATGCAGAATAATTTATGCCTTATAAATTGAGCCATTTTCTTCCAAATGTAGAATATTTTATACTTGAAAAATCCTTTATTTTTAATAAGTTTTTACATATTTCTT-----TGCCTATCCTCCACAGATATTTATGCTCATGTTATATATTTTATACATTCATTTATATATTCTTCACATTCATATAGTCTTACCATGCATTTATATATTTGAATATGTATTTTATTTTGTATGTTAC-TTTTtatgtattttataaatttaaatttcatatttag-aaaatgttcagtgagcaccagggcctcagtgttcattgttttcttcaagattgagtta-tttttacacattattagaacacaattgatttaataagcacggatctatgacagatgttggtaattattatgcatagagataaatatttattggaa-ttagtttattgatgagatgggtggagtttcagttagttccttcatcagttggctgaacatcacctgtGGGCCAAGGggccatgcaccctggttacccgagatccttcctatttatgcctcctgtcccag-gaaattattaataactaatagtgcccctgtctcctcaaaagtattccactttggttaggaattatacggttgccctaCATACCATAGatgagacagttcagcagcaaccctgtgattatttttacctttgcaggtggaaggtgcctagaaacctgctcctgtgactatgtcgctgggaagcgttttgccataggaatgccatctggccctcaaaactccttctg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1118420 824 + 81552678 -TTTTTTCTCTTTGAATTGA-CTTTTATATTCTAATTCCCTCATATTTCCTTCCAAATGCAGAATAATTTATGCCTTGTAAATTGAGCCGTTTTCTTCCAAATGTGGAATATTTTATACTTGAAAAGTCCTTTATTTTTAATATG-TTTTACATATTTCTT---------TATCCTCTACAGATATTTATGCTCATGTTATATGTTTGATACATTCATTTATATGTTCTTCACATTCATATAGTCTTACCATGCATTTATATATTTGAATATGTATTTTATTTTGTATGTTACATTTTtatgtattttataaatgtaaatttcatattcag-aaaatgttcagtgagcacaagggcctcagtgttcaatgttttcttcaacattgagttattttttacacattattagaacacaattgatttaataagcacagatctatgacagatgttggtaattattatgcatagagataaatatttattggaattttgtttattgatgagatgggtggagtttcagttagttccttcatcagttggctgaacatcacctgttgGCCGAGGggccatgcatgctggttacccgagatccttcctgtttctgccttctatcccag-gaaattattaataattaatagcgctcctgtctcctcaaaagcattccagtttggttaggaattacatggttgccctaCATACTATAGatgagacagttcagcagcaa-cctgtgattatttttccctttgcagatggaaggtgcctagaaacctgctcctgtgac--tgtcgctgggaaaagttttgccacaggaatgccatctggccctaaaaactccttctg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1447644 822 + 108979918 TGTTTTTCTCTTTGAATTGA-CTTTTATATTCTAATTCCTCCATATTTCCTTCCAAATCCAGAATAATTTATGCCTTGTAAATTGAGCCATTTTATTCCAAATGTAGAATATTTTATACTTGA-AAGTCCTTTATTTTTAATATG-TTTTACATAGTTCTTTATTTTACCTATCCTCTACAGATATTTATGCTCATGTCATATATTTGGTACATTCATTTATATATTCTTCACATTCTTATAGTCTTACCATACATTTACATATTTGAATATGTATTTTATTTTGTATGTTACATTTTTATatatgttataaatttaaatttcatatttag-aaaatgttcagtgagtacaagggtctcagtgttcatggttttcttcaagattgagttattttgtacacattattagaacataatcgatttaatcagcacggatctatgacagatgttggtaattattatgcatagagataaatatttgatggaa-ttagtttattgatgagatgggtggagtttccgttagttccttcagcagttggctgaacatcagctgttgGCCGAGGGGCCATGCATGCTGGTTACCCGAGATCCTTCCTATTTATGCCTTCTATCCCAG-GAAATTATTAATAATTAACAGTGCTCCTGTCTCCTCAAAAGTATTCCACTGTGGTTAGGAATTATATGATCGTCCTGCGTACTATAGatcagacagttcagccgcaaccctgtgattatttttaccttcgcagatggac-atgcctagaaacc-gaccgcgtgactatgtcactgggaaaagctc-----------tgccatctggccctcaaaaccccttctg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1420078 822 - 111193037 TGTTTTTCTCTTTGAATTGA-CTTTTATATTCTAATTCCTCCATATTTCCTTCCAAATCCAGAATAATTTATGCCTTGTAAATTGAGCCATTTTATTCCAAATGTAGAATATTTTATACTTGA-AAGTCCTTTATTTTTAATATG-TTTTACATAGTTCTTTATTTTACCTATCCTCTACAGATATTTATGCTCATGTCATATATTTGGTACATTCATTTATATATTCTTCACATTCTTATAGTCTTACCATACATTTACATATTTGAATATGTATTTTATTTTGTATGTTACATTTTTATatatgttataaatttaaatttcatatttag-aaaatgttcagtgagtacaagggtctcagtgttcatggttttcttcaagattgagttattttgtacacattattagaacataatcgatttaatcagcacggatctatgacagatgttggtaattattatgcatagagataaatatttgatggaa-ttagtttattgatgagatgggtggagtttccgttagttccttcagcagttggctgaacatcagctgttgGCCGAGGGGCCATGCATGCTGGTTACCCGAGATCCTTCCTATTTATGCCTTCTATCCCAG-GAAATTATTAATAATTAACAGTGCTCCTGTCTCCTCAAAAGTATTCCACTGTGGTTAGGAATTATATGATCGTCCTGCGTACTATAGatcagacagttcagccgcaaccctgtgattatttttaccttcgcagatggac-atgcctagaaacc-gaccgcgtgactatgtcactgggaaaagctc-----------tgccatctggccctcaaaaccccttctg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1447986 822 + 3644372 TGTTTTTCTCTTTGAATTGA-CTTTTATATTCTAATTCCTCCATATTTCCTTCCAAATCCAGAATAATTTATGCCTTGTAAATTGAGCCATTTTATTCCAAATGTAGAATATTTTATACTTGA-AAGTCCTTTATTTTTAATATG-TTTTACATAGTTCTTTATTTTACCTATCCTCTACAGATATTTATGCTCATGTCATATATTTGGTACATTCATTTATATATTCTTCACATTCTTATAGTCTTACCATACATTTACATATTTGAATATGTATTTTATTTTGTATGTTACATTTTTATatatgttataaatttaaatttcatatttag-aaaatgttcagtgagtacaagggtctcagtgttcatggttttcttcaagattgagttattttgtacacattattagaacataatcgatttaatcagcacggatctatgacagatgttggtaattattatgcatagagataaatatttgatggaa-ttagtttattgatgagatgggtggagtttccgttagttccttcagcagttggctgaacatcagctgttgGCCGAGGGGCCATGCATGCTGGTTACCCGAGATCCTTCCTATTTATGCCTTCTATCCCAG-GAAATTATTAATAATTAACAGTGCTCCTGTCTCCTCAAAAGTATTCCACTGTGGTTAGGAATTATATGATCATCCTGCGTACTATAGatcagacagttcagccgcaaccctgtgattatttttaccttcgcagatggac-atgcctagaaacc-gaccgcgtgactatgtcactgggaaaagctc-----------tgccatctggccctcaaaaccccttctg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1402239 822 - 10304083 TGTTTTTCTCTTTGAATTGA-CTTTTATATTCTAATTCCTCCATATTTCCTTCCAAATCCAGAATAATTTATGCCTTGTAAATTGAGCCATTTTATTCCAAATGTAGAATATTTTATATTTGA-AAGTCCTTTATTTTTAATATG-TTTTACATAGTTCTTTATTTTACCTATCCTCTACAGATATTTATGCTCATGTCATATATTTGGTACATTCATTTATATATTCTTCACATTCCTATAGTCTTACCATACATTTACATATTTGAATATGTATTTTATTTTGTATGTTACATTTTTATatatgttataaatttaaatttcatatttag-aaaatgttcagtgagtacaagggtctcagtgttcatggttttcttcaagattgagttattttgtacacattattagaacataatcgatttaatcagcacggatctatgacagatgttggtaattattatgcatagagataaatatttgatggaa-ttagtttattgatgagatgggtggagtttccgttagttccttcagcagttgactgaacatcagctgttgGCCAAGGggccatgcatgctggttacccgagatccttcctatttatgccttctatcccag-gaaattattaataattaacagtgctcctgtctcctcaaaagtattccactgtggttaggaattatatgatcgtcctGCGTACTATAGATCAGACAGTTCAGCCGCAACCCTGTGATTATTTTTACCTTCGCAGATGGAC-ATGCCTAGAAACC-GACCGCGTGACTATGTCACTGGGAAAAGCTC-----------TGCCATCTGGCCCTCAAaaccccttctg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1478922 830 - 107702431 ATTTTTTCTCTTTGAATTGA-ATTTTATATTCTAA-TCCTCCATATTTCCTTCCAAATCCAGAATAATTTATGCCTTGTAAATTGAGCCATTTTATTCCAAATGTAGAATATTTTATACTTGA-AAGTCCTTTATTTTTAATATG-TTTTACATAGTTCTTTATTTTACCTATCCTCTACAGATATGTATGCTCATGTCATATATTTGGTACATTCATTTATATATTCTTCACATTCTTATAGTCTTACCATACATTTACATATTTTAATATGTATT---TTTTGTATGTTACATTTTTATatatgttataaatttaaatttcatatttag-aaaatgttcagtgagtacaagggtctcagtgttcatggttttcttcaagattgagttattttttacacattattagaacataatcgatttaatcagcacggatctatgacagatgttggtaattattgtgcatagagataaatatttgatggaa-ttagtttattgatgagatgggtggagtttccgttagttccttcagcagttggctgaacatcagctgttgGCCGAGGGGCCATGCATGCTGGTTACCCGATATCCTTCCTATTTATGCCTTCTATCCCAG-GAAATTATTAATAATTAACAGTGCTCCTGTCTCCTCAAAATTATTCCACTGTGGTTAGGAATTATGTGGTCGTCCTACATACTATAGatcagacagttcagccgcaaccctgtgattatttttaccttcacagatggac-gtgtctagaaacctgcccctgtgactatgtcgctgggaaaagttctgccataggaatgccatctggccctcaaaactccttctg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 962353 822 - 2200435 TTTTTTTCTCTTTGAATTGA-CTTTTATATTCTAATTCCCCCATATTTCCTTCCAAATCCAGAATAATTTATGCCTTGTAAATTGAGCCATTTTATTCCAAATGCAGAATATTTTATACTTGA-AAGTCCTTTATTTTTAATATG-TTTTACATATTTCTTTATTTTACCTATCCTCTACAGATATTTATGCTCATGTCATATATTTGGCATATTCATTTATATATTCTTCACATTCATATAGTCTTACCATACATTTACATATTTGAATATGTATTTTATTTTGTATGTTACATTTTTATatatgttataaatttaaatttcatatttagaaaaatgttcagtgagtac-agggtctcagtgttcgtggttttcttcaagattgagttattttttacacattattagaacataatcgatttaatcagcacggatctatgacagatgttggtaattattatgcatagagataaatatttgatggaa-ttagtttattgatgagatgggtggagtttccgttagttccttcagcagttggctgaacatcagctgttgGCCGAGGGGCCATGTATGCTGGTTACCCGAGATCCTTCCTATTTATGCCTTCTATCCCAG-GAAATTATTAATAATTAACAGTGCTCCTGTCTCCTCAAAAGTATTCCACTGTGGTTAGGAATTATATGATCGTCCTGCGTACTATAGatcagacagttcagccgcaaccctgtgattatttttaccttcgcagatggac-gtgcctagaaacc-gaccgtgtgactatgtcactgggaaaagctc-----------tcccatctggccctcaaaaccccttctg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1400747 833 - 13651311 GTTTTTTCTCTTTGAATTGA-CTTTTATATTCTAATTCCCCTATATTTCCTTCCAAATCCAGAATAATTTATGCCTTGTAAATTGAGCCATTTTATTCCAAATGTAGAATATTTTATACTTGA-AAGTCCTTTATTTTTAATATG-TTTTACATAGTTCTTTATTTTACCTATCCTCTACAGATATTTATGCTCATGGTATATATTTGGCATATTCATTTATATATTCTTCACATTCATATAGTCCTACCATACATTTACATATTTGAATATGTATTTTATTTTGTATGTTACATTTTTATGtatgttataaattttaatttcctatttag-aaaatgttcagtgagtacaagggtctc--tgttcatggttttcttcaagattgagttattttttacacattattagaacataatcgatttaatcagcatggatctatgacagatgttggtaattattatgcatagagataaatatttaatggaa-ttagtttattgatgagatgggtggagtttccgttagttccttcagcagttggctgaacatcagctgttgGCCAAGGGGCCATGCATCCTGGTTACCCGAGGTCCTTCCTATTTATGCCTTCTACCCCAG-GAAACTATTAATAATTAACAGTGCTCCTGTCTCCTCAAAAGTATTCCACTGTAGTTAGGAATTACATGGCCATCCTACATACTATAGatcagacagttcagcagcaaccctgtgattatttttacctttgcagatggaaggtgcctagaaacccgcccctgggactgtgtcactgggaaaagttctgccataggaatgccatctggccctcaaaactccttctg i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1399681 804 - 108792865 TCTTTTGCTCTTTGAATTGATCGTTTATATTCTAATTCCCTCATATTTTCTTCCAAATGCAGAATTATTTATTCCTTGCAAATTGAGCCGTTTGCTTCTAAATGTAAAACATTTTATCCTTCA-AAGTCCTTAATTTTTAATATT-TTTCACCTATTTCTT-----TACATATGCTCTACAGGTACTTGTGTTCATGCTACATATTTGGTACATTCGTTTACATG---TTCAccttcatatagtcttatcctgcatgtatatatttgaattttt----tattttgtatgttacgtttttatatc----ataaatttaaatttcatatttag---actcttcagtgagcacaggggtctcagtgttcattgttttcttcaagattgagttattttttacacgttgttggaacac----tgtttaatcagcatggatatatgatgaatgttgataatttttatgcatagagataaatgttaattggaa-ttagtttattgatgagatgggtggagtttcagttagttccttcatcagtctg-tgaccatcacctgttgGCCAAGGGGCCGTGCATCCTTGTTACCTGAGATTTTTTCTTTTTGTGCCTTCTCTGCCAGCAAAATTATTACTATCTAGT---GCTCCTGTCTCCTCAAGAGCATCCCACTTGGGTTTGGAATTATAAGGCTGCCCTACCTGCTGTAGATGAGAGAGCATCTCAAAAACCCTGTGGTGACTTTTACCTTTGCAGACAGAAGGTGCCTAGAAACC------TGTGAGTG-GTCGCtgggaaaagctttgtcacgggaatgccatctggccctcagaaccccttctg i calJac3.chr14 I 2 C 0 s saiBol1.JH378218 1240199 797 - 7082604 TTTTTTTTTTTGCTCTTTGATTTTTTATG-TCTAATTCCCTCATATTTTCTTCCAAATCCAGAATAATCTATGCCTTGTGAATTGAACCATTTTCTTCCAAATGTAAAATATTTTATCCTTGA-AAGTCC------TTTAATATT-TTTCACATATTTCTT-----TACATATGCTCTACAGATATTTGTGTTCATGCTATATATTTGGAACATTCGTTTACATA---TTCACATTCATATAGTCTTATCATGCGTGTATATATTTGAATTTTT----TATTTTGTATGTTACGTTTTTGTATCTCTtataaatttaaatttcatatttag---actcttcagtgagcacaagggtctgagtgttcatcgttttcttcaagattgagttattttttacacgttgttggaacac--------taatcagcatggatatatgatggatgtggataatttttatgcatagagataaatattaattggaa-ttcgtttactgatgagatgcgtggagtttcagttagttccgtcatcagtttg-tgactgtcacctgttgGCCAAGGGGCCATGCATCCTGGTTACCTGAGACTTTTCCTTTGTATGCCTTCTATCCCAGCAAAATTATTAATATCTAGT---GCTCCTGTTTCCTCAAAGGCATTCCACCCAGGTTTGGAATTACACGGCTGCCcttcctgctgtagatgagagagttcggcagcaaccccgtgatgacttttacctttgcagatagaaggtgcctagaaacc------tgtgactg-gttgctgggaaaagctttgtcacagaagtaccatctggccctcaaaactccttctg i saiBol1.JH378218 I 2 C 0 s cebCap1.NW_016107827v1 1323332 805 + 1864846 TTTTTTGCTCTTTGAATTGATTTTTTATATTCTAATCCCCTCATATTTTCTTCCAAATCCAGAATAATTTATGCCTTGTAAATTGAGCCATTTTCTTCCAAATTTAAAATATTTTATCCTTGA-AAGTCCTTTATTTTTAATATT-TTTCACATATTTCTT-----TAC-TATGCTCTACAGATATTTGTGTTCATGTTATATATTTGGTACATTCGTTTACATA---TTCACATTCATATAGTCTTATCATGCATGTATATATTTGAATTTGT----TATTTTGTATGTTACGTTTTTATatctgttatgaatttaaatttcatatttag---actcttcagtgagcacaatggtctcagtgttcatcgttttcttcaagattgagttattttttacacgttgttggaacgc----tatttaatcagcatggatatatggcaaatgttgataatttttatgcatagagataaatattcattggaa-ttagtttgttgatgagatgggtggaattt--gttAGTTCCTTCATCACTTTG-TGACCGTCACCTGTTGGCCAAGGggccgtgcatcctggttacctgagacatttcctttttatgccttctatcctagcaaaattatcaatatctagt---gctcctgtctcctcaaaagcattccactcgggtttggaattacacgcttgccctaCCCGCTGTAGATGAGAGAGTTTGGCAGCAACCCTGCGATGACTCTTACCTTTGCAGGTGGAGGGTGCCTAGAAACC------TGTGACTG-GTCGCtgggaaaagctttctcacaggaatgccatctggccctcaaaactccttctg i cebCap1.NW_016107827v1 I 262 C 0 s aotNan1.NW_018513311v1 127990 806 + 287728 TTTTTTGCTCTTTGAATTGATTTTTTATATTCTAATTCCCTCATATTTTCTTCCAAATCCAGAATAATTTATGCCTTGTAAATTGAGCCATTTTCTTCCAAATGTAAAATATTTTATCACTGA-AAGTCCTTTATTTTTAATATT-TTTCAcata-ttctt-----tacatatgctctacagatatttacgttcatgttacatatttggtgcattcatttacata---ttcacattcatatAGTCTTATCATGCATGAATATATTTGAATTTTT------ACTTGTATGTTACATTTTTATATCTC--ataaatttaaatttcatatttag---actcttcagtgagcacaagggtctcagtgttcatcgttttcttcaagattgagttattttttacacgttgttggaacac----tatttaatccgcgtggatatatgacgagtgttgataatttttatgcatagagataaatattaattggaa-ttagtttattgatgagatgggtggggtttCGGTTAGTCCCTTCATCAGTCTG-TGACCGTCACCTGTTGGCCAAGGGGCCGTGCATCCTGGTTACCTGAGATTGTTCCTTTTTATGCCTCCTATCCCAGCAAAGTTATTAATATCTAGTTGCGCTCCTGTCTCCTCAAAAGCACTCCACTTGGGTTTGGAATTACACGGCTGCCCTGCCTGCTGTGGATGACAGAGCTCGGCAGCAACCCCGTGATGACTCCTACCTTTGCAGACAGAAGGTGCCTGGAAACC------TGCGACTG-GTCGCtgggaaaagctttgtcacaggaatgccatctggccctcaaaactccttctg i aotNan1.NW_018513311v1 I 2 C 0 e mm10.chr12 90019184 2917 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I e dasNov3.JH576208 1733191 5844 + 4416731 I a score=994998.000000 s hg38.chr2_KI270774v1_alt 135140 96 + 223625 agatatagaagaaaatgaacatataatgagctatcattaaaatgatttttattcatgtatcagcaatcaattcaataacattgtcctccaaatttc s panTro5.chr2A 1422921 96 + 111504155 agatatagaagaaaatgaacatataatgagctgtcattaaaatgatttttattcatgtatcagcaatcaattcaataacatagtcctccaaatttc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1371960 96 + 114371477 agatatagaagaaaatgaacatataatgagctatcattaaaatgatttttattcatgtatcagcaatcaattcaataacatagtcctccaaatttc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1396526 96 + 1464242 agatacagaagaaaatgaacatataatgagctatcattaaaatgatttttattcatgtatcagcaaacaattcaataacattgtcctccaaatttc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1119244 96 + 81552678 agatatagaagaaaatgaacatataatgagctatcattaaaatgatttttattcatgtatcagcaaacaattcaataacattgtcctccaaatttc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1448466 96 + 108979918 agatgtagaagaaaatgaacatatgatgagctatcattaaaatgatttttattcatgtatcagcaaacaattcaataacattgtcctccaaatttc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1420900 96 - 111193037 agatgtagaagaaaatgaacatatgatgagctatcattaaaatgatttttattcatgtatcagcaaacaattcaataacattgtcctccaaatttc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1448808 96 + 3644372 agatgtagaagaaaatgaacatatgatgagctatcattaaaatgatttttattcatgtatcagcaaacaattcaataacattgtcctccaaatttc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1403061 96 - 10304083 agatgtagaagaaaatgaacatatgatgagctatcattaaaatgatttttattcatgtatcagcaaacaattcaaaaacattgtcctccaaatttc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1479752 96 - 107702431 agatgtagaagaaaatgaacatatgatgagctatcattaaaatgatttttattcatgtatcagcaaacaattcaataacattgtcctccaaatttc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 963175 96 - 2200435 agatgtagaagaaaatgaacatatgatgagctatcattaaaatgatttttattcatgtatcagcaaacaattcaataacattgtcctccaaatttc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1401580 96 - 13651311 agatgtagaagaaaatgaacatatgacgagctatcattaaaatgatttttattcatatatcagcaaacaattcaataacattgtcctccaaatttc i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1400485 96 - 108792865 agatacagaagagaatgaacagataatgagctatcattcaaattattttcattcatgtatcggcaaacaattcaataagagtgtcctccagatttt i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1240996 96 - 7082604 agatacagaagaaaatgaacagataatgagctatcattagaattatttttattcatgtattggcaaacaattcaataacagtgtcctccaaatttt i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1324137 96 + 1864846 agataccgaagaaaatgaacagataatgagctatcattaaaattatttttattcatgtattggcaaaaaattcaataacagtgtcctccaaatttt i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 128796 96 + 287728 agatacagaagaaaatgaacagataatgagctatcattaaaattatttttattcatgtattggcaaacaattccataacagtgtcctccaaatttt i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1739035 89 + 4416731 aaaaAGAAAATAAAATGatcatattatgtgctgtcattaaaattaaatttatt----gatcagcaaacaacttaaggagggtctctgtt--attt- i dasNov3.JH576208 I 5844 C 0 e mm10.chr12 90019184 2917 - 120129022 I e otoGar3.GL873658 938640 1645 + 5252280 I a score=2742327.000000 s hg38.chr2_KI270774v1_alt 135236 280 + 223625 taaacaaaatattggaaaatacctcatttgcacaaaggattagttaccaatctttagtcttttatttc------------ctcagtttctagaagatgctctga-gacatatcaagtgactgttaattgtgcctacaccccttcaacttaggggcaccttgcttaacacagtacactcggaactaa-gtg-tgaaatc-----aaaatatt---caacacacctttaccttatcatgcacttcaaatacatttttgtcagaatata--ttttgacca-----------atagaaca----------------aaactgcagaccagcctact s panTro5.chr2A 1423017 280 + 111504155 taaacaaaatattggaaaatacctcatttgcacaaaggattagttaccaatctttagtcttttatttc------------ctcagtttccagaagatgctctga-gacatatcaagtgactgttaattgtgcctacaccccttcaacttaggggcaccttgcttaacacagtacactcggaactaa-gtg-tgaaatc-----aaaatatt---caacacacctttaccttatcatgcacttcaaatacatttttgtcagaatata--ttttgacca-----------atagaaca----------------aaactgcagaccagcctact i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1372056 280 + 114371477 taaacaaaatattggaaaatacctcatttgcacaaaggattagttaccaatctttagtcttttatttc------------ctcagtttccagaagatgctctga-gacatatcaagtgactgttaattgtgcctacaccccttcaacttaggggcaccttgcttaacacagtacactcggaactaa-gtg-tgaaatc-----aaaatatt---caacacacctttaccttatcatgcacttcaaatacatttttgtcagaatata--ttttgacca-----------atagaaca----------------aaactgcagaccagcctact i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1396622 279 + 1464242 taagcaaaatattggaaaatacctcatttgcacgaaggattagttaccaatcttgagtcttttatttc------------ttcagtttccagaagatgctctga-gccatatcaagtgactgttaattgtgcctacaccccttcaactta-gggcaccttgcttaacacagtacactcggaactaa-gtg-tgaaatc-----aaaacatt---caacacacctttaccttatcatgcgcttcaaatacatttttgtcagaatatc--ttttgaccc-----------atagaaca----------------aaactgcagaccagcctgct i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1119340 280 + 81552678 taaacaaaatattggaaaatacctcatttgtacaaaggattagttaccaatctttagtcttttatttc------------ctcagtttctagaagatgctccga-cacatatcgagtgactgttaattgtgcctacaccccttcaacttaggggcaccttgcttaacacagtacactcggaactag-atg-tgaaatc-----aaaatatt---caacacaccgttaccttatcatgcacttcaaatacatttttgtcagaatata--ttttgacca-----------aaagaacg----------------aaactgcagactagcctact i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1448562 279 + 108979918 taaacaaaatattggaaaatacctgattcacac-aaggactagttacgaatctttagtcttttatttc------------ctcaatttctagaaaatgttccaa-gacacatcaagtgactgttaattgtgcctacatcccttcaacttaggggcaccttgcttaacacagtacactcggaactag-gtg-tgaaatc-----aaagtgtt---caacacacctttaccTTATCATGCACTTCAAATACATTTTTGTCAGAATATA--TTTTGACCA-----------GTGGAAAG----------------AAACTGCAAACCAGCCTACT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1420996 279 - 111193037 taaacaaaatattggaaaatacctgattcacac-aaggactagttacgaatctttagtcttttatttc------------ctcaatttctagaaaatgttccaa-gacacatcaagtgactgttaattgtgcctacatcccttcaacttaggggcaccttgcttaacacagtacactcggaactag-gtg-tgaaatc-----aaagtgtt---caacacacctttaccttatcatgcacttcaaatacatttttgtcagaatata--ttttgacca-----------gtggaaag----------------aaactgcaaaccagcctact i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1448904 279 + 3644372 taaacaaaatattggaaaatacctgattcacac-aaggactagttacgaatctttagtcttttatttc------------ctcaatttctagaaaatgttccaa-gacacatcaagtgactgttaattgtgcctacatcccttcaacttaggggcaccttgcttaacacagtacactcggaactag-gtg-tgaaatc-----aaagtgtt---caacacacctttaccTTATCATGCACTTCAAATACATTTTTGTCAGAATATA--TTTTGACCA-----------GTGGAAAG----------------AAACTGCAAACCAGCCTACT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1403157 279 - 10304083 taaacaaaatattggaaaatacctgattcacac-aaggactagttacgaatctttagtcttttatttc------------ctcaatttctagaaaatgttccaa-gacacatcaagtgattgttaattgtgcctacatcccttcaacttaggggcaccttgcttaacacagtacactcagaactag-gtg-tgaaatc-----aaagtgtt---caacacacctttgccttatcatgcacttcaaatacatttttgtcagaatata--ttttgacca-----------gtagaagg----------------aaactgcaaaccagcctact i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1479848 264 - 107702431 taaacaaaatattggaaaatacctgattcacac-aaggactagttacgaatctttagtcttttatttc------------ctcaatttctagaaaatgttccaa-gacacatcaagtgactgttaattgtgcctccaccccttcaacttaggggcaccttgcttaacacagtacactcagaactag-gtg-tgaaatc-----aaagtgtt---caacacacctttgccttatcatgcacttcaaatacatttttgtcagaatata--ttttgacca-----------gtagaagg----------------aa---------------act i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 963271 279 - 2200435 taaacaaaatattggaaaatacctgattcacac-aaggactagttacgaatctttagtcttgtatttc------------ctcaatttctagaaaatgttccaa-gacacatcaagtgactgttaattgtgcctacatcccttcaacttaggggcaccttgcttaacacagtacactcagaactag-gtg-tgaaatc-----aaagtgtt---caacacacctttgccttatcatgcacttcaaatacatttttgtcagaatata--tgttgacca-----------gtagaagg----------------aaactgcaaaccagcctact i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1401676 279 - 13651311 taaacaaaatattggaaaatacctgattcgcac-aaggattagttaccagtctttagtcttttatttc------------ctcaatttctagaaaatgttccaa-gacacatcaagtgactgttaattgtgcctacaccccttcaacttaggggcaccttgcttaacacagtacactcggaactag-gtg-tgaaatc-----aaagtgtt---caacacacctttacctcatcatgcacttcaaatacatttttgtcagaatata--ttttgacca-----------acagaacg----------------aaactgcagaccagcctact i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1400581 275 - 108792865 taaacaaaatattggaaaatacctggtttgtac-aaggattagttaccaagttttagtctttaatttt------------ctcaatttctagaaaatgctccaa-gacgtatcaagggactgtcaattgtgcctgaaccccttccacggaggggaaccttgcttaacacagcacactcgtgagtag-gtg-tgaaatc-----aaaatatc---caacacacctttaccttataatgta--tcaaatacatttttgccagaatata--ttttgacca-----------ccaggatg----------------aaa--gcagatgagccgact i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1241092 277 - 7082604 taaacaaaatgttggaaaatacctgatttgtac-aaggattagttaccgatcttcagtcttttatttg------------ctcgatttctagaaaatgctccaa-gacatatcaagtgactgtcaattgtgcctgcaccccttccatggaggggtaccttgcttaacacagcacactcgtgcgtag-gtg-tgaaatc-----aaaatatt---caacacacatttaccttatgttatg--tcaaatacatttttgccagaatata--ttttgacca-----------ccaggaca----------------aaagtgcacatgagcctact i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1324233 277 + 1864846 taaacaaaatattggaaaatacctgatttgtac-aaggattagttaccaatctttagtcttttatttt------------ctcaatttctatagaatgctccaa-gacatatcaagtgactgtcaattgcgcctgcacccctcccacggaggggaaccttgcttaacacagcacactcGTGAGTAG-GTG-TGAAATC-----AAAATATT---CAACACACATTTACCTTATAATGTA--TCCAATACATTTTTGCCAGAATATA--TTTTGACCA-----------CCAGGACG----------------ACAGTGCAGGTGACCCTACT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 128892 277 + 287728 taaacaaaatattggaaaacacctgatttgtac-aaggatcagttaccaatctttagtcttttatttt------------ctcaatttccagaaaatgctccaa-gacatgtcaagtggctgtcaatcgtgcctgcaccccttccacggaggggggccttgcttaacgcagcacactcgtgagtag-gtg-tgaaatc-----aaaagagt---caacacacctttaccttgtaacgta--tcaaatgcatttttgccagaatata--ttttgacca-----------ccaggacg----------------aaagtgcagatgagcctgct i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90022101 264 - 120129022 TAAACaaggc-ttgaaaaacatctgcttttcat-tgggattagtagccaatcattaatatttcaattt------------ctcagcttctggagaa-------a-aatgtgccaaacagtatttaattata-------ccctttggcttagaggtgctgtccctgac-----atacttagaggcagcttg-ggaaatcagtaaagattgat---caattcacatttgccttaatgtgggcctgaaatatatttttacctagttctg--tttggacca-----------a-agaata----------------aaatcacaggtcagtttgag i mm10.chr12 I 2917 C 0 s dasNov3.JH576208 1739124 316 + 4416731 taaaacaaat-ttggaaagcacctgatttgcaa-aag----agtaaccaatcatttgattttcatttttcaattttcgcacacagttcccaaaaagttctaaaaggacacatcaaatgact-ttaattaatcctg---ttcttttactaagaggcacctgacttaacacaatatcattaaaaatga-ttgataaaata-----aaaatattataaaacatgccttggccttatcatgcacattagataaatttttgtcaaaatataatttttatttatatatatttatatagaatatatatttatatagaataaacttcaaatcattctatt i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 938640 1645 + 5252280 I a score=955261.000000 s hg38.chr2_KI270774v1_alt 135516 114 + 223625 tatgggaaacttcaccatct---agccta-ttggctgaagccattgtcatcgccaaatcaaacagccaaatacaactgactctctctctctctcaggagagacttaactttatttttA s panTro5.chr2A 1423297 114 + 111504155 tacgggaaacttcaccatct---agccta-tcggctgaagccattgtcatcgccaaatcaaacagccaaatacaactgactctctctctctctcaggagagacttaactttatttttA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1372336 114 + 114371477 tacgggaaacttcaccatct---agccta-tcggctgaagccattgtcatcgccaaatcaaacagccaaatacaactgactctctctctctctcaggagagacttaactttatttttA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1396901 114 + 1464242 tatgggaaacttcaccatct---agccta-ttggctgaagccatcgtcatcgccaaatcaaacagccaaatacaactgactctctctctctctcaggagagacttaactttatttttA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1119620 73 + 81552678 tatgggaaacttcaccatct---agccta-ttggctgaatccattgtcatcgccaaatcaaacagc-----------------------------------------cTCCCTTTTTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1448841 110 + 108979918 TATGGGAAACTTCACCATCT---AGCTTA-CTGGCTGAATCCATTCTCATCCCCAAATCAAACAGCCAAATACAACCGA----CTCTCTCTCTCAGGAGAGACTTAACTTTATTTTTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1421275 110 - 111193037 tatgggaaacttcaccatct---agctta-ctggctgaatccattctcatccccaaatcaaacagccaaatacaaccga----ctctctctctcaggagagacttaactttatttttA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1449183 110 + 3644372 TATGGGAAACTTCACCATCT---AGCTTA-CTGGCTGAATCCATTCTCATCCCCAAATCAAACAGCCAAATACAACCGA----CTCTCTCTCTCAGGAGAGACTTAACTTTATTTTTA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1403436 110 - 10304083 tatgggaaacttcaccatct---agctta-ctggctgaatccattctcatcgccaaatcaaacagccaaatacaaccga----ctctctgtctcaggagagacttaactttatttttA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1480112 110 - 107702431 tatgggaaacttcaccatct---agccta-ctggctgaatccattctcatcgccaaatcaaacagccaagtacaaccga----ctctctctctcaggagagacttaactttatttttA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 963550 110 - 2200435 tatgggaaacttcaccatct---agctta-ctggctgaatccattctcatcgccaaatcaaacagccaaatacaaccga----ctttctctctcaggagagacttaactttatttttA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1401955 110 - 13651311 tatgggaaacctcaccatct---agccta-ctggctgaatccattctcatcaccaaatcaaacagccaaatacaaccaa----ctctctctctcaggagagacttaactttattttta i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1400856 113 - 108792865 catgggaaac--cgacatgggaaaccctg-ttggctgaatccattcttgtcgccagaccaaacagcccactacagcttt--ctctctctctctcaggagagactcaactgcatttttA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1241369 112 - 7082604 cacgggaaacttcaccatcg---accctg-ttggctgaatccattctcatcaccaaaccaaacagccacctacagcttt--ctctctctctctcaggaaagacctaactatatttttc i saiBol1.JH378218 C 0 I 276 s cebCap1.NW_016107827v1 1324510 105 + 1864846 CATGGGAAACGTCACCACCC---ACCCCG-TTGGCCGAATCCATTCTCGTCACCACACCAAACAGCCAACTGCAGCTTT--CTCTCCCTCTCTC----TATttttaact-tatttt-- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 129169 110 + 287728 cacgggaaacttcgccgtcc---accctg-ttggccgaatccattctcat--ccaaaccaaacagccaaccacagcttt--ctcgctctctctcgggaaagacttaagtgtatttttA i aotNan1.NW_018513311v1 C 0 I 9 s otoGar3.GL873658 940285 108 + 5252280 TAAGGGAGAACACAGCCTTt---aacccacctgactgagtccattctcactgccaaacccatcaaccaaatatgacttc----ctctttctc---agaaagccctaactttattttca i otoGar3.GL873658 I 1645 C 0 s mm10.chr12 90022365 88 - 120129022 tgtagaaaaatcctccttca---gccttg-gtgatagggctcattcttagt-tcaaagcaattaac-------------------------ttagaaaaagatctgattttattttta i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1739440 108 + 4416731 tatggatacatccttattta---aactaa-ttggcagtgcccaatctccttgtcaaatcaatcagccaaacatgactta------ttttctctcagaaatagcctgattttattttta i dasNov3.JH576208 C 0 C 0 a score=3403765.000000 s hg38.chr2_KI270774v1_alt 135630 408 + 223625 ACTTACTT---TA-TTTTAATTCAAATTCATTTATTAATG---GTTCCTTTGACAACCCGCTCACTTCTGAAATCAGAAAA--CCAGCAACTTCCTCAG--------TTCCCACAAGTTCACCT---GGACAATCACAC-Gggcaggaacaggcgcgacaccct-ggtg-gcttcatggtgctttgattaaaggatgttt-tatgccacaggatttcaaatgatctctttgtttggagtaccagaagtttctgtcctccagagaactgcccc--tggtacattctagaagggtgggagaccctccttcggaaaac----------------------agggga-------GTGGGAAGGAACCCTGCAGGCAGCCA-----CCTCCAGACAGCATG---TGCTGAGCTCGGGAGAGGGTGCCTGTGGGAACCAAGCCTCTGGAA-TGAGCTCCCTTGAAGCCAGTCATG---ACC s panTro5.chr2A 1423411 408 + 111504155 ACTTACTT---TA-TTTTAATTCAAATTCATTTATTAATG---GTTCCTTTGACAACCAGCTCACTTCTGAAATCAGAAAA--CCAGCAACTTCCTCAG--------TTCCCACGAGTTCGCCT---GGACAATCACAC-Gggcaggaacaggcgcgacaccct-ggtg-gcttcatggtgctttgattaaaggatgttt-tatgccacaggatttcaaatgatctctttgtttggagtaccagaagtttctgtcctccagagaactgcccc--tggtacattctagaagggtgggagCCCCTCCTTCAGAAAAC----------------------AGGGGA-------GTGGGAAGGAACCCTGCAGGCAGCCA-----CCTCCAGACAGCATG---TGCTGAGCTCGGGAGAGGGTGCCTGTGGGAACCAAGCCTCTGGAA-TTAGCTCCCTTGAAGCCAGTCATG---ACC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1372450 407 + 114371477 ACTTACTT---TA-TTTTAATTCAAATTCATTTATTAATG---GTTCCTTTGACAACCAGCTCACTTCTGAAATCAGAAAA--CCAGCAACTTCCTCAG--------TTCCCACGAGTTCGCCT---GGACAATCACAC-Gggcaggaacaggcgcgacaccct-ggtg-gcttcatggtgctttgattaaaggatgttt-tatgccacaggatttcaaatgatctctttgtttggagtaccagaagtttctgtcctccagagaactgcccc--tggtacattctagaagggtgggagcccctccttcggaaaac----------------------agggga-------GTGGGAAGGAACCCTGCAGGCAGCCA-----CC-CCAGACAGCATG---TGCTGAGCTCGGGAGAGGGTGCCTGTGGGAACCAAGCCTCTGGAA-TGAGCTCCCTTGAAGCCAGTCATG---ACC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1397015 408 + 1464242 ACTTACTT---TA-TTTTAATTCAAATTCATTTATTAATG---GTTCCTTTGACAACCAGCTCACTTCTGAAATCAGAAAA--CCAGCAACTTCCTCAG--------TTCCCACAAGTTCGCCT---GGACAATCACAT-Gggcaggaacaggtgcgacaccct-ggtg-gcttcatggtgctttgattaaaggatgctt-tatgccacaggatttcaaatgatctctttgttcggagtaccagaagtttctgtcctgcagagaactgcccc--tggtacattctagaagggagggagaccctccttcggaaaac----------------------agggga-------GTGGGAAGGAACCCTGCAGGCAGCCA-----CCTCCAGACAGCATG---TGCTGAGCTTGGGAGAGAGTGCCTGTGGGAACCAAGCCTCTGGAA-TGAGCTCCCTTGAAGCCAGTCATG---ACC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1119693 403 + 81552678 ------CT---TA-TTTTAATTCAAATTCATTTATTAATG---GTTCCTTTGACAACCAGCTCACTTATGAAATCAGAAAA--CCAGCAACTTCCTCAG--------TTCCCACAAGTTCGCCT---GGACAATCACACAGAGCAGGAACAGGGGCGACACCCT-GGtg-gcttcatggtgctttgattaaaggatgttt-tatgccacaggatttcaaatgatctctttgtttggagtaccagaagtttctgtcctccagagaactgcccc--tggtacattctagaagggtgggagaccctccttcggaaaac----------------------agggga-------GTGGGAAGGAACTCTGCAGGCAGCTG-----CCTCCAGACAGCGTG---TGCTGAGCTCGGGAGAGGGTGCCTGTGGGAACTGAGCCTCTGAAA-TGAGCTCCCTTGAAGCCAGCCATG---ACC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1448951 359 + 108979918 ACTTATTT---TATTTTTCATTCA-----------------------------------------------------------------------------------TTCCCGCAAGCTCGCCT---GGACAATCACACGGggcaggaacaggcacgacaccct-ggtg-gcttcatggtgctttgattaaaggatgttt-tatgccacaggattt-aaatgatctctttgtttggagtaccagaagtttctgtcctcccgagaactgccgc--tggtgcattctagaagggtgggagaccctccttcagaaaacagtaggagaagCTTTCCTGT--AGGGCA-------GTGGGAAGGAACCCTGTAGGCAGCCA-----CCTCCAGACAGCATG---TGCCGCGCTCGGGAGAGGGCGCCTGTGGGAACCGAGCCTCTGGGA-TGAGCTCCCTGGAATCCAGCCATG---ACC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1421385 359 - 111193037 ACTTATTT---TATTTTTAATTCA-----------------------------------------------------------------------------------TTCCCGCAAGCTCGCCT---GGACAATCACACGGggcaggaacaggcacgacaccct-ggtg-gcttcatggtgctttgattaaaggatgttt-tatgccacaggattt-aaatgatctctttgtttggagtaccagaagtttctgtcctcccgagaactgccgc--tggtgcattctagaagggtgggagaccctccttcagaaaacagtaggagaaggtttcctga--agggca-------gtgggaaggaacCCTGTAGGCAGCCA-----CCTCCAGACAGCATG---TGCCGCGCTCGGGAGAGGGCGCCTGTGGGAACCGAGCCTCTGGGA-TGAGCTCCCTGGAATCCAGCCATG---ACC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1449293 358 + 3644372 ACTTATTT---TATTTTTAATTC------------------------------------------------------------------------------------TTCCCGCAAGCTCGCCT---GGACAATCACACGGggcaggaacaggcacgacaccct-ggtg-gcttcatggtgctttgattaaaggatgttt-tatgccacaggattt-aaatgatctctttgtttggagtaccagaagtttctgtcctcccgagaactgccgc--tggtgcattctagaagggtgggagaccctccttcagaaaacagtaggagaagctttcctga--agggca-------gtgggaaggaacCCTGTAGGCAGCCA-----CCTCCAGACAGCATG---TGCCGCGCTCGGGAGAGGGCGCCTGTGGGAACCGAGCCTCTGGGA-TGAGCTCCCTGGAATCCAGCCATG---ACC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1403546 359 - 10304083 ACTTATTT---TATTTTTAATTCA-----------------------------------------------------------------------------------TTCCCGCAAGCTTGCCT---GGACAATCACACGGggcaggaacaggcaccacaccct-ggtg-gctttgtggtgctttgattaaaggatgttt-tatgccacaggattt-aaatgatctctttgtttggagtaccagaagtttctgtcctcccgagaactgcccc--tggtacattctagaagggtgggagaccctccttcagaaaacagtaggagaaactttcctga--agggga-------gtgggaaggAATCCTGCAGGCAGCCG-----CCTCCAGACAGCACG---TGCCGCGCTTGGGAGAGGGCGCCTGTGGGAGCCGAGCCTCTGCGA-TGAGCTCCCTGGAATCCAGCCATG---ACC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1480222 429 - 107702431 ACTTATTT---TATTTTTAATTCAAATTCATATATTAATG---GTTCCTTTGACAACCATCTCACTTCTCAAATCAGAAAA--CCAGCAACTTCCTCAG--------TTCCCGCAAGCTCGCCT---GGACAATCACACGGggcaggcacaggcatgacaccct-ggtg-gcttcgtggtgctttgattaaaggatgttt-tatgccacaggattt-aaatgatctctttgtttggagtaccagaagtttctgtcctccagagaactgcccc--tggtacattctagaagggtgggacaccctccttcagaaaacagtaggagaaactttcctga--agggga-------gtgggaaggaacCCTGTAGGCAGCCG-----CCTCCAGACTGCATG---TGCCGCGCTCAGGAGAGGGCGCCTGTGGGAACCGAGCCTCTGGGA-TGAGCTCCCTGGAATCCAGCCATG---ACC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 963660 429 - 2200435 ACTTATTT---TATTTTTAATTCAAATTCATATATTAATG---GTTCCTTTGACAACCATCTCCCTTCTGAAATCAGAAAA--CCAGCAACTTCCTCAG--------TTCCCGCAAGCTCGCCT---GGACAATCACACGGggcaggaacaggcacgacaccct-ggtg-gcttcgtggtgctttgattaaaggatgttt-tatgccacaggattt-aaatgatctctttgtttggagtaccagaagtttctgtcctccagagaactgcccc--tggtacattctagaagggtgggagaccctccttcagaaaacagtaggagaaactttcctga--agggga-------gtgggaaggaacCCTGTAGGCAGCCA-----CCTCCAGACAGCACG---TGCCGCACTCGGGAGAGGGCGCCTGTGGGAACCGAGCCTCTGCGA-TGAGCTCCCTGGAATCCAGCCATG---ACC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1402065 430 - 13651311 acttattt---tatttttaattcaaattcatgtattaatG---GTTCCTTTGACAACCATCTCACTTCTGAAATCAGAAAA--CCAGCAACTTCCTCAG--------TTCCCGCAAGCTCGCCT---GGACAATCACacaaggcaggaacaggcgcgacaccct-ggtg-gcttcatggtgctttgattaaaggatgttt-tatgccaaaggatttcaaatgatctctttgtttggagtaccagaagtttctctcctccagagaactgcccc--tggtacattctagaagggtgggagaccctccttcggaaaacagtaggagaaactttccaga--agggga-------gtgggaaggaacCCTGCAGGCAGCCG-----CCTCCAGACAGCATG---TGCCGCGCTCAGGAGAGGGCGCCTGTGGGAACCGAGCCTCTGGGA-TGAGCTCCCTGGAATCCAGCCATG---ACC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1400969 414 - 108792865 ACTTATTTTACTATTTTCATTTCAAATTCATGTATTGATG---ATTCCTTTGACAACCATCTCGCTTCTGAAGTCAGAAAACTCCAGCGA-TTCCTCAG--------TTCCGGCAACTTCGTCT---GGATGCTTGCACAGGGCCAGCACAGGCGGGATA-TGT-GGTG-GCTTCACGGGGCTT-------------------TGCCAAAGGATTTCAAAAGACCTCTTTGTTTGGAGTGCCAGAAGCTTCTGTCCTCCAGAGAACGGCCCC--TGGTACATTCTAGAAGGGTGGGAGACCATCCTTGGGAAAACAGTAGGGGAAACTTTCCTGA--AAGGGA-------GTGGGGAGCCACCCTGCAGACGGCCA-----CC-GCAGGCAGCATG---TGCCCAGCCCAGGAGTGGGTGCCTGCGGGGACCGAGGCTCTGGGA-TGAGCTCCCTTGAAGCCGGCCATG---ACC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1241757 408 - 7082604 acTTATTT---TATTTTTATTTCAAATTCATGTGTTAATG---ATTCCTTTGACAACCATCTCACTTCCGAAGACAGAAAACTCCAGCGA-TTCCTCAG--------TTCCG-----------------------GCACGGGGCCAGCACAGATGGG-TA-CCT-GGtg-gcttcacggtgctttgattaaaggatattt-tatgccacaggatttcaaatgatctctttgtttgaagtaccagaagcttctgtcctccagagagctgcccc--tggtacattctagaagggtgggagaccctccttgggaaaacagtaggagaaactttcctga--aaggga-------gtgggagggcaccctgcaggcagcca-----ct-ccaggcagcatg---tgcccagcccaggagcgggtgcctgtgggaaccgaggctctggga-tgagctccctcgaagccagccatg---acc i saiBol1.JH378218 I 276 C 0 s cebCap1.NW_016107827v1 1324615 429 + 1864846 acttattt---tatttttatttCAAATTCATGTATTAATG---ATTCCTTTGACAACCATCTCGCTTCTGAAGTCAGAAAACTCCAGCGA-TTCCTCAG--------TTCCGGCAAGTTCGTCT---GGACGCTTGCACAGGGCCAGCACAGGCGGGATA-CCT-GGtg-gcttcatggtgctttgattaaaggatattt-gatgccacaggatttcaaatgacctctttgtttggagtaccagaagcttctgtcctccagagaactgcccc--tggtacattctagaagggtgggagaccctccttgggaaaacagtaggagaaactttcctga--aaggga-------gtgggaaggcaccctgcaggcagcca-----ct-ccaggcagcatg---tgcccagcccaggagtgggtgcctgtgggaagcgaggctctggga-tgagctcccttgaagccagccatg---acc i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 129288 412 + 287728 ACTTATTT---TCTTTTTATTTCAAATTCATGTATTAATG---ATTCCTTTGACAACCATCTCGCTTCTGAAGTCAG--AACTCCAACGA-TTCCTCAG--------TTCTGGCAAGATCGTCT---GGACGCTTGCACAGGGCCAGCACAGGCGGGAGA-CCT-GGtg-gcttcatggtgctttgattaaaggatattt-tatgccacaggatttcaaatgacctctttgtttggagtaccagaagcttctgtcctccagagaactgcccc--tggtacattctagaagggtgggagaCCCTCCTTGGGAAAACAGGAGGAGAAAC-TTCCTGA--AAGGGA-------GTGGGAAGGCGCCCTGCAGCCA--------------------CATG---TGCCCAGCCCAGGAGTGCGTGCCTGCGGGAACCGAGGCTCTGGGA-GGAGCTCCCTTGAAGCCAGCCGTG---ACC i aotNan1.NW_018513311v1 I 9 C 0 s otoGar3.GL873658 940393 387 + 5252280 -------------------aatcaaataaatatattaatG---GTTCCCCTGTCAACTATCTAACTTGTAAACTTAGAATATTGCAGCAAATTCCAAAG--------TTTCTACAAGTTTATCTTTCTAATAAGCACAT------AGTATAGGGAGAAGATTCTGGGTG-GTTCTATGGTGCTTTAATTAAAGGATGTTGAAATACAACAATATTTCAAATTTCCTCTTTGTTTGGAGTATCCCAAGCTTCTTACCTGGCGGGAAGGGCCCC--T-GTGTCCCCTAGAGGGTGGCAGGGTGGCCTTTGAGGAAAAAGCAGGAGA-------------GAGCTC-------GTGGGAAGGGA-CCTGGGGGCAGCAT-----GCCTCACACAG--------ACTCCACTGGGGGGAGG------------ACTGAGGCTGTGCAG-C-AGGTCCCCTGAGACCAGCCGTGTCCACC i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90022453 375 - 120129022 -------------------attcaaatgcacatactaatatgtaCCCCCTCCGTAGTCTTCTCACTTCTGGTATT--------TTCCTAGGTACCTTAT--------TTCTAGTAGAA---------ATACCATCAT-CATGATAAGTACAAG-----GACCCT-GGG---------TGTGTCTTGATTAAAGTTGTTTA-AATATTACAATATTTCAAATAGTCCCTT-----GGATTGCCCCAAATATCTGTTCTCT-GAGTATGACCCCCATAGTACATTCTAGAAGGACAAGTG-CCCTACTTTGGAGAGAAACTTTAGGGAGTGTCCTGGATAGAGCA-------GTGTGAGGCA--TTTATCAGCAGTCAGAGCTTCTTGAGATAGGATT---CCCC---CTCAGGAAGGT-------TAAAGACTAAGCTCCTAGAA-GTCACTTCCTT----CCA--CATA---CCC i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1739548 435 + 4416731 -------------------attcaactgaatgctttaatatacattCCCTTGACAACCATCTCACTCAtgaatttaaaatatttcagtaaatcccaaagtatcctgattctaacatactc-tta---gcataaatatctatgacaggattagacatgaagccca-aaggtgttttaaggtgtcttgattaaaggatgcttaaatacaagaatatttcaaaaattttccctctttagggcatcagaagattttatcttccagggaagtgcatc-actgtatattccagaaggatgagaaatatacctttcaaaaaaagt-----aaagtctattgg--aaatgaagaagttgtacaggagaatcaactagcaggata-----cctcaaaaactgatgcattttcaaatttaggaaaaagtgtatatggaatttgaggtttggggagctaatttcctagagattagtcatg---tcc i dasNov3.JH576208 C 0 I 47 a score=407912.000000 s hg38.chr2_KI270774v1_alt 136038 46 + 223625 TGGGCCTCCAGGAGGCCTTTCGGGTCTTCT------------GGGGAG----CTGTGCCCCT s panTro5.chr2A 1423819 46 + 111504155 TGGGCCTCCAGGAGGCCTTTCGGGTCTTCT------------GGGGAG----CTGTGCCCCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1372857 46 + 114371477 TGGGCCTCCAGGAGGCCTTTCGGGTCTCCT------------GGGGAG----CTGTGCCCCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1397423 46 + 1464242 TGGGCCTCCAGGAGGCCTTTCGGGTCTTCT------------GGGGAG----CTGTGCCCCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1120096 46 + 81552678 TGGGCCTCCAGGAGGCCTTTTGGGTCTTCT------------GGGGAG----CTGTGCCCCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1449310 46 + 108979918 TGGGCCTCCAGGAGGCATTTCGGGTCTTCT------------GCGGAG----CTGTGACCGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1421744 46 - 111193037 TGGGCCTCCAGGAGGCATTTCGGGTCTTCT------------GGGGAG----CTGTGCCCCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1449651 46 + 3644372 TGGGCCTCCAGGAGGCATTTCGGGTCTTCT------------GGGGAG----CTGTGCCCCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1403905 46 - 10304083 TGGGCCTCCAGGAGGCATTTCGGGTCTTCT------------GGGGAG----CTGTGCCCCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1480651 46 - 107702431 TGGGCCTCCAGGAGGCATTTCGGGTCTTCT------------GGGGAG----CTGTGCCCCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 964089 46 - 2200435 TGGGCCTCCAGGAGGCATTTCGGGTCTTCT------------GGGGAG----CTGTGCCCCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1402495 46 - 13651311 TGGGCCTCCAGGAGGCATTTCGGGTCTTCT------------GGGGAG----CTGTGCCCCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1401383 46 - 108792865 TGGGCCTCCAGGAAGCCTTTCGGGTCTTCT------------GGGGAG----CTGTGCCCCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1242165 46 - 7082604 tgggcctccaggaagcctttTGGGTCTTCT------------GGGGGG----CTGGGCCCAT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1325044 46 + 1864846 TGGGCCTCCAGGAAGCCTTTCGGGTCTTCT------------GGGGAG----CTGTGCCCCT i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 940780 60 + 5252280 T--GCCCCTGGGATGCCTTTTAGGACCACCCCGTGTGCCCAGGTGGAGTCTTCTTTATGTAT i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90022828 30 - 120129022 CAG------AGAAA----------TCTATC------------AGGAAG----ACCAACTGCT i mm10.chr12 C 0 C 0 e aotNan1.NW_018513311v1 129700 0 + 287728 C e dasNov3.JH576208 1739983 47 + 4416731 I a score=3780999.000000 s hg38.chr2_KI270774v1_alt 136084 326 + 223625 TGGGCCTCCGGAGAGG--CCCCACTTATTCTCCCTGAG-AATGGTG-----------TCT--------------TATATCTGGAACTCACTGCT--TCTGTGTTCTTCTCCCCCATCTCAAACACATCCTTGCATTTGTCT-CCACAGAGACCACCCCAGATGGGGCGCCTCCAACACGGCCCTGGCACGATGGCTCCCTCCAGTCTATGAGGACGGCTTCAGTCAGCCCCGAGGCTGGAACCCCGGCTTCTTGTACAACGGGTTCCCACTGCCCCCGGTGGGTAC-TCAG---AACGCTACTATCCTGGACTAAG--ATTGGG--TCCTGT---GATGCT-----------------------GAGG-----------------GAGGGAAATAGCCTTttactggg s panTro5.chr2A 1423865 326 + 111504155 TGGGCCTCTGGAGAGA--CCCCACTTATTCTTCCTGAG-AATGGTG-----------CCT--------------TATATCTGGAACTCACTGCT--TCTGTGTTCTTCTCCCCCATCTCAAACACATCCTTGCATTTGCCT-CCACAGAGACCACCCCAGATGGGGCGCCTCCAACACGGCCCTGGCACGATGGCTCCCTCCAGTCTATGAGGACGGCTTCAGTCAGCCCCGAGGCTGGAACCCCGGCTTCTTGTACAACGGGTTCCCACTACCCCCGGTGGGTAC-TCAG---AACGCTACTATCCTGGACTAAG--ATTGGG--TCCTGT---GATGCT-----------------------GAGG-----------------GAGGGAAATAGGCTTTTACTGGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1372903 326 + 114371477 TGGGCCTCTGGAGAGA--CCCCACTTATTCTCCCTGAG-AATGGTG-----------CCT--------------TATATCTGGAACTCACTGCT--TCTGTGTTCTTCTCCCCCATCTCAAACACATCCTTGCATTTGCCT-CCACAGAGACCACCCCAGATGGGGCGCCTCCAACACGGCCCTGGCACGATGGCTCCCTCCAGTCTATGAGGACGGCTTCAGTCAGCCCCGAGGCTGGAACCCCGGCTTCTTGTACAACGGGTTCCCACTACCCCCGGTGGGTAC-TCAG---AACGCTACTATCCTGGACTAAG--ATTGGG--TCCTGT---GATGCT-----------------------GAGG-----------------GAGGGAAATAGCCTTTTACTGGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1397469 337 + 1464242 TGGGCCTCCGGAGAGA--CCCCACTTATTCTCCCTGAG-AATGGTGGAACTCACCATTCT--------------TATATCTGGAACTCACTGCT--TCTGTGTTCTTCTCCCCCATCTCAAACACATCCTTGCATTTGTCT-CCGCAGAGACCACCCCAGATGGGGCGCCTCCAACACGGCCCTGGCACGATGGCTCCCTCCAGTCTATGAGGACGGCTTCAGTCAGCCCCGAGGCTGGAACCCCGGCTTCTTGTACAACGGGTTCCCACTGCCCCCGGTGGGTAC-TCAG---AACGCTACTATCCTGGACTAAG--ATTGGG--TCCCGT---GATGCT-----------------------GAGG-----------------GAGGGAAATAGCCTTttactggg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1120142 327 + 81552678 TGGGCCTCCGGAGAGA--CCCCACTTATTCTCCCTGAGAAATGGTG-----------CCT--------------TATATCTGGAACTCACTGCT--TCTGTGTTCTTCTCCCCCATCTCAAACACATCCTTGCGTTTGTCT-CCACAGAGACCACCCCAGATGGGGCGCCTCCAACACGGCCCTGGCACGATGGCTCCCTCCAGTCTATGAGGATGGCTTCAGTCAGCCCCGAGGCTGGAACCCCGGCTTCTTGTACAACGGGTTCCCACTGCCCCCGGTGGGTAC-TCGG---GACACTGCTATCCTGGACTAAG--ATTGGG--TCCTGT---GATGCT-----------------------GAGG-----------------GAGGGAAATAGCCTTTTACTGGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1449356 326 + 108979918 TGGGCCTCCGGAGAGA--CCCCACTTATTCTCCCTGGG-AATGGTT-----------CCT--------------TATACCTGGGACTCTCTGCT--TCTGCGTTCTTCTCCGCCATCTCAAACACATCCTTGCGTTTGTCT-CCGCAGAGACCACCCCAGATGGGGTGCCTCCAACACAGCCCTGGCACGATGGCTCCCTCCAGTCTACGAGGACGGCTTCAGTCAGCCCCGAGGCTGGAACCCCAGCATCTTGCACAACGGGTTCCCACTGCCCCCGGTGGGTAC-TCGG---GACGCTGCTACCCTGGACGAAG--ATTGGG--TCCTGT---GATGCT-----------------------GAGG-----------------GAGGGAAATAGCCTTTTACTGGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1421790 326 - 111193037 TGGGCCTCCGGAGAGA--CCCCACTTATTCTCCCTGGG-AATGGTT-----------CCT--------------TATACCTGGGACTCTCTGCT--TCTGCGTTCTTCTCCGCCATCTCAAACACATCCTTGCGTTTGTCT-CCGCAGAGACCACCCCAGATGGGGTGCCTCCAACACAGCCCTGGCACGATGGCTCCCTCCAGTCTACGAGGACGGCTTCAGTCAGCCCCGAGGCTGGAACCCCAGCATCTTGCACAACGGGTTCCCACTGCCCCCGGTGGGTAC-TCGG---GACGCTGCTACCCTGGACGAAG--ATTGGG--TCCTGT---GATGCT-----------------------GAGG-----------------GAGGGAAATAGCCTTttactggg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1449697 326 + 3644372 TGGGCCTCCGGAGAGA--CCCCACTTATTCTCCCTGGG-AATGGTT-----------CCT--------------TATACCTGGGACTCTCTGCT--TCTGCGTTCTTCTCCGCCATCTCAAACACATCCTTGCGTTTGTCT-CCTCAGAGACCACCCCAGATGGGGTGCCTCCAACACAGCCCTGGCACGATGGCTCCCTCCAGTCTACGAGGACGGCTTCAGTCAGCCCCGAGGCTGGAACCCCAGCATCTTGCACAACGGGTTCCCACTGCCCCCGGTGGGTAC-TCGG---GACGCTGCTACCCTGGACGAAG--ATTGGG--TCCTGT---GATGCT-----------------------GAGG-----------------GAGGGAAATAGCCTTTTACTGGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1403951 325 - 10304083 TGGGCCTCTGGAGAGA--CCCCACTTATTC-CCCTGGG-AATGGTT-----------CCT--------------TATATCTGGGACTCTCTGCT--TCTGCGTTCTTCTCCGCCATCTCAAACACATCCTTGCGTTTGGCT-CCGCAGAGACCACCCCAGATGGGGCGCCTCCAACACAGCCCTGGCACGATGGCTCCCTCCAGTCTACGAGGACGGCTTCAGTCAGCCCCGAGGCTGGAACCCTGGCTTCTTGCACAACGGGTTCCCACTGCCCCCGGTGGGTAC-TCGG---GACGCTGCTACCCTGGAAGATG--ATAGGG--TCCTGT---GATGCT-----------------------GAGG-----------------GAGGGAAATAGCCTTttactggg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1480697 326 - 107702431 TGGGCCTCTGGAGAGA--CCCCACTTATTCTCCCTGGG-AATGGTT-----------CCT--------------TATATCTGGGACACTCTGCT--TCCGTGTTCTTCTCCGCCATCTCAAACACATCCTTGCGTTTGTCT-CCGCAGAGACCACCCCAGATGGGGTGCCTCCAACACAGCCCTGGCACGATGGCTCCCTCCAGTCTACGAGGATGGCTTCAGTCAGCCCCGAGGCTGGAACCCCGGCTTCTTGCACAACGGGTTCCCACTGCCCCCGGTGGGTAC-TCGG---GACGCTGCTACCCTGGACGAAC--ATTGGG--TCCTGT---GATGCT-----------------------GAGG-----------------GAGGGAAATAACCTTttactggg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 964135 326 - 2200435 TGGGCCTCCGGAGAGA--CCCCACTTATTCTCCCTGGG-AATGGTT-----------CCT--------------TATATCTGGGACTCTCTGCT--TCTGCGTTCTTCTCCGCCATCTCAAACACATCCTTGCGTTTGTCT-CCGCAGAGACCACCCCAGATGGGGCGCCTCCAACACAGCCCTGGCACGATGGCTCCCTCCAGTCTACGAGGACGGCTTCAGTCAGCCCCGAGGCTGGAACCCCGGCTTCTTGCACAACGGGTTCCCACTGCCCCCGGTGGGTAC-TCGG---GACACTGCTACCCTGGACGAGG--ATTGGG--TCCTGT---GATGCT-----------------------GAGG-----------------GAGGGAAGTAGCCTTttactggg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1402541 324 - 13651311 TGGGCCTCCGTAGAGA--CCCCACGTACTCACCCTGAG-AATGGTT-----------CCT--------------TATATCTGGGA--CTCAGCT--TCTGTGTTCTTCTCCGCCATCTCAAACACATCCTTGCGTTTGTCT-CCACAGAGACCACCCCAGATGGGGTGCCTCCAACATAGCCCTGGCACGATGGCTCCCTCCAGTCTACGAGGACGGCTTCAGTCAGCCCCGAGGCTGGAACCCCAGCTTCTTGCACAACGGGTTCCCACTGCCCCCGGTGGGTAT-TCGG---GACACTGCTACCCTGGACGAAG--ATCGGG--TCCTGT---GATGCT-----------------------GAGG-----------------GAGGGAAATAGCCGTTTACTGGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1401429 324 - 108792865 TGGGCCTCCTGAGAGA--CCCCACTTACTCTCCCTGAG-AATGGCA-----------CCT--------------TGTATCTGGGACTCACTGCT--TGTGTGTTCTGCTCCCCCATCT-AAACACATCCATGTGTTTGTCT-CTGCAGAGACCACCCCAGATGGGGAGCCTCCAACACAGCCCTGGCTCGATGGCTCCCCCCAGTCTACGAGGACGGCTTCAGTCAGCCCCGAGGCTGGAACCCTGGCTTCCTACACAACGGGTTCCCCTTGCCCCCGGTGGGTAC-TCGG----ATGCTGCCACCCTGGACTAAG--ACTGGG--TTCTGT---GATGCT-----------------------GAGG-----------------GAGGGAAGTAGCCTCTTGCTGGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1242211 325 - 7082604 TGGGCCTCCTGAGAGA--CCCCGCTTACGCTCCCTGAG-CATGGCA-----------CCT--------------TGTGTCTGGGACTCACGGCT--TCCGCGTTCTGCTCCCCCATCTCAAACACACCCACGTGTTTGTCT-CTGCAGGGACCACCCCAGATGGGGAGCCTCCAACACAGCCCTGGCCCGATGGCTCCCTCCAGTCTATGAGGATGGCTTCAGTGAGCCCCGCGGCTGGAACCCTGGCTTCTTCCACAATGGGTTCCCCTTGCCCCCGGTGGGTAC-TCGG----ATGCTGCTACGCTGGACTGAG--ACTGGG--TTCTGT---GATGCT-----------------------GAGG-----------------GAGGGCAGTAGCCCCTGCCTGGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1325090 325 + 1864846 TGGGCCTCCTGAGAGA--CCCCACTTACTCTCCCTGAG-AATGGCA-----------CCT--------------TGTATCTGGGACTCACTGCT--TCTGTGTTCTGCTCCCCCGTCTCAAACACATCCATGTGTTTGTCT-CTGCAGAGACCACCCCAGATGGGGAGCCTCCAACACAGCCCTGGCTCGATGGCTCCCTCCAGTCTACGAGGATGGCTTCAGTCAGCCCCGAGGCTGGAATGCTGGCTTCTTACACAACGGGTTCCCCTTGCCCCCGGTGGGTAC-TCGG----ATGCTGCTACCCTGGACTAAG--ACTGGG--CTCTGT---GATGCT-----------------------GAGG-----------------GAGGGCAGTAGCCTCTTACTGGG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 129700 323 + 287728 TGGGCCTCCTGAGAGG--CCCCGCTTACTCTCCCTGAG-AATGGCA-----------CCT--------------TGTGTCCGGGACTCGCTGCT--TCTGTGTTCCGCTCCCCCATCTCAAACACATCCATATGTTTGTCT-CTGCAGAGACCACCCCAGCTGGGGAGCCGCCAACACAGCCCTGGCTCGATGGCTCCCTCCAGTCTACGAGGACGGCTTCAGTCAGCCCCGAGGCTGGAACCCTGGCTTCTTACACCACGGGTTCCCCTTGCCCCCGGTAGGTAC-TCAG----ATGCTGCTACCCTGGACT--G--ACTGGG--CTCTGT---GATGCT-----------------------GAGG-----------------GAGGGAGGCAGCCTCTTACTGGG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 940840 320 + 5252280 AAGGGCTCTG--GAGG--CCACcctgattctccctgag-gacactg-----------cct--------------cctatgtagGACTTGCATCC--CCCGCTTTCC-CTCCCTTGGCTCAAACTTGTGC--ACATTTGT-T-TTGCAGAGACCACCCGCGGTGGGGTGCCTCCAACACAGCCCTGGCCCGATGGCTGCCTCCCGACTACGAAGATGGCTTCAGTCAGCCCCGGGGCTGGAACCACGGCTTCCTACATAACGGGTTTCCCCTGCCCCTGGTGGGTAC-CTCA----AGACCAATGCACTGGCC--AG--CCAGCC--CCCTACATGGGTCCC-----------------------AGGG-----------------GCTGGGGATTGACCATCACTGAA i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90022858 365 - 120129022 AAGCCCTATCTAGAGA--CTTAAGAGATGTTCCCAGAG-TGTATTA-----------TCTTGAGTGAGTTATACTGTATTGAGACCTCAACATT--TCTTCATT---TTCTTCCATCTCAAACACATCCCTTCATTTGTTT-CCACAGAGATCACCCCAGATGGGGAGCCTCCAACACAGCCCTAGCAAGATGGCTGCCTCCTGTCTATGAAGATGGCTTCAGTCAGCCCAAAGGCTGGAACCCTAATTTCTTATACCACGGCTTCCCACTGCCCCCGGTTGGTAC-TCATTTAGAACCTACTTCAACATGACAAG--AACAGGTTTTCCAT---AATGCTATAAGACTCCTCATAGCCTTGGGGGGG-----------------GGGGTTGATGGGTGACTGCTGGG i mm10.chr12 C 0 I 197 s dasNov3.JH576208 1740030 361 + 4416731 TGGGTCTCAGAGAAGCATCCTCATTTCTTTTCCTAGAG-AATGATG-TGCAATCTAATAT--------------TATATTTGGGATTTGCTGCTGCTCTCCTTCCTTCTTTCCCATCTCAAACACTTTCACCTGTTTGCTTCCCTTAGAGACCATCCCAGATGGGGAGCCTCCAACACAGCCCTCGCAAGATGGCTTCCTCCAGTCTATGAAGATGGGATTAGTCAACCCAAAGGCTGGAACCACAACTACTTATACAATGGGTTTCCACTGCCCCTGGTTTGTACATCAG---GATGCTGCTTAAATTGACTTGGCACTAGAT--TCCTGT---AATTCT-----------------------AAAAACCTCTCCAAATTTTTTGAGGAAACTCaccttttactgag i dasNov3.JH576208 I 47 C 0 a score=735200.000000 s hg38.chr2_KI270774v1_alt 136410 78 + 223625 ttcttgct---------------cgtgctgggtgctgcgtgcaatcccttcagatcctccc------------------agcctccctttgatgtagcaatcactgtttct s panTro5.chr2A 1424191 78 + 111504155 TTCTTGCT---------------CATGCTGGGTGCTGCGTGCAATTCCCTCAGATCCTCCC------------------AGCCTCCCTTTGATGTAGCAATCACTGTTTCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1373229 78 + 114371477 TTCTTGCT---------------CAtgctgggtgctgcgtgcaattccctcagatcctccc------------------agcctccctttgatgtagcaatcactgtttct i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1397806 78 + 1464242 ttcttgct---------------catgctgggtgctgcgtgcgattccctcagatcctccc------------------agcctccctttgatgtagcaatcactgtttct i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1120469 78 + 81552678 TTCTTGCT---------------CATGCTGGGTGCCGCATGCAATTCCTTCAGATCCTCCC------------------AGCCTCCCTTTGATGTAGCAACCGCTGTTTCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1449682 78 + 108979918 TTCTTGCT---------------CGTGCTGGGTGCCACGTGCAACTCCTTCAGATCCTCCC------------------GCCCTCCCTTTGGTGTAGCAATCACTGTTTCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1422116 78 - 111193037 ttcttgct---------------ggtgctgggtgccacgtgcaactccttcagatcctccc------------------gccctccctttggtgtagcaatcactgtttct i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1450023 78 + 3644372 TTCTTGCT---------------CGTGCTGGGTGCCACGTGCAACTCCTTCAGATCCTCCC------------------GCCCTCCCTTTGGTGTAGCAATCACTGTTTCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1404276 78 - 10304083 ttcttgct---------------cgtgctgggtgccatgtgcaactccttcagatcctccc------------------agcctccctttggtgtagcaatcactgtttct i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1481023 78 - 107702431 ttcttgct---------------cgtgctgggtgccacatgcaactccttcagatcctccc------------------agcctccctttgatgtagcaatcactgtttct i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 964461 78 - 2200435 ttcttgct---------------cgtgctgggtgccacgtgcaactcgttcagatcctccc------------------agcctccctttggtgtagcaatcactgtttct i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1402865 78 - 13651311 TTCTTGCT---------------CATGCTGGGCGCCACGTGCAACTCCCTCAGATCCTCCC------------------AGCCTCCCTTTGGTGTAGCAATCACTGTTTCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1401753 96 - 108792865 CTCTGGCT---------------CGTGCTGGGTGTCACGTGCATTTCCTTCAGATCCCCCCAGGAACTGCACCCCAGGGAGCCTCCCTTTGACCTAGGGGTCGCTGTCTCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1242536 76 - 7082604 CTGTTGCT---------------CGTGCTGGGTGTCACGTGCGATTCCTTCAGATCCCC--------------------AGCCTCCCTTTGACGTAGTAATCGCTGTCTCT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1325415 78 + 1864846 CTCTTGCT---------------Cgtgctgggtgtcacgtgcagttccttcagatcccccc------------------agcctccctgtgatgtagctatcgctgtctct i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 130023 78 + 287728 CTCTTGCT---------------CGTGCTGGGTGTCACCTGCAGTTCCTTCAGATCCCCCC------------------AGCCTCCCTGTGACGTAGCAATCGCTGTCTCT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 941160 64 + 5252280 --CTTGCT---------------AG----AGGCACCAGGCACAGTG---TGAGGCCATCCC----------------------TCCCTTTGCAGTGG-GGTCACAGTCGGG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1740391 93 + 4416731 aacttgcttaatatggcaggcactgtgccagatgctttatataattctctctagtgcacaa------------------aacatccctatgcggtaggtataactacttct i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90023223 197 - 120129022 I a score=5697645.000000 s hg38.chr2_KI270774v1_alt 136488 599 + 223625 gccctatggcttaggagccaaggctcag-----ggagattgaAATCTCTTAG----TGAGTGGAACCCTGCAGAT------TTAAATTAAGTTTT-CTC-AACCCTAACGTTTCTGTTCCTGAAAATCACTTCAGTGTTTTCAGATAAATTCCTTTATCCATCATGTG---G--GCTAGGTACATCCCAAGATGATTATGAGTTCAGCAATCCAC---TTGATGTAAAGATG------ACTGCTTTACTCCCAGAGG----------TGAATTTATTTGCTGGACAC--TCATAGCCTAGTA--------------GAATCTACTGGTCTATTTGGTCAAAAAATGGGTCATTTTGCTTGTAATTTAACTACTCATTTCAATGAATAAGCCAGC--------------------------CTGTTTGCTCTTGTGCCATGTTCAGTGATGAAATTATCTAG---------AAATACATCAGTGGATGTTCTGTTTAGCCCAAA-GAGCGCAGGTGGTGGGACTCAGG-TCTGACTCAGACCAGCTGTGGACAGATACACCAGCACAGAGTTCCCCTACGAAAGCCAACAACTTTACCTAGGCAA--TTTTCCTAGGCGGGCTTTTAGTAAGAGGACCTGGTGTTCCCAGAAGCC-GTGAGAAGCCCTGGGTAGAGCTGGAGGCTGTGTCACTGAAG s panTro5.chr2A 1424269 602 + 111504155 GCCCTATGGCTTAGGAGCCAAGGCTTAG-----GGAGATTGAAATCTCTTAG----TGAGTGGAACCCTGCAGAT------TTAAATTAAGTTTT-CTC-AACCCTAACGTTTCTGTTCCTGAAAATCACTTCAGTGTTTTCAGATCAATTCCTTTATCCATCATGTG---G--GCTAGGTACATCCCAAGATGATTATGAGTTCAGCAATCCACTTGTTGATGTAAAGATG------ACTGCTTTACTCCCAGAGG----------TGAATTTATTTGCTGAACAC--TCATAGCCTAGTA--------------GAATCTACTGGTCTATTTGGTCAAAAAATGAGTCATTTTGCTTGTAATTTAACTACTCATTTCAATGAATAAGCCAGC--------------------------CTGTTTGCTCTTGTGCCATGTTCAGTGATGAAATTATCTAG---------AAATACATCAGTGGATGTTCTGTTTAGCCCAAA-GAGCGCAGGTGGTAGGACTCAGG-TCTGACTCAGACCAGCTGTGGACAGATACACCAGCACAGAGTTCCCCTACGAAAGCCAACAACTTTACCTAGGCAA--TTTTCCTAGGCGGGCTTTTAGTAAGAGGACCCGGTGTTCCCAGAAGCC-GTGAGAAGCCCTGGGTAGAGCTGGAGGCTGTGTCACTGAAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1373307 602 + 114371477 gccctatggcttaggagccaaggcttag-----ggagattgaAATCTCTTAG----TAAGTGGAACCCTGCAGAT------TTAAATTAAGTTTT-CTC-AACCCTAACGTTTCTGTTCCTGAAAATCACTTCAGTGTTTTCAGATCAATTCCTTTATCCATCATGTG---G--GCTAGGTACATCCCAAGATGATTATGAGTTCAGCAATCCACTTGTTGATGTAAAGATG------ACTGCTTTACTCCCAGAGG----------TGAATTTATTTGCTGAACAC--TCATAGCCTAGTA--------------GAATCTACTGGTCTATTTGGTCAAAAAATGGGTCATTTTGCTTGTAATTTAACTACTCATTTCAATGAATAAGCCAGC--------------------------CTGTTTGCTCTTGTGCCATGTTCAGTGATGAAATTATCTAG---------AAATACATCAGTGGATGTTCTGTTTAGCCCAAA-GAGCGCAGGTGGTAGGACTCAGG-TCTGACTCAGACCAGCTGTGGACAGATACACCAGCACAGAGTTCCCCTACGAAAGCCAACAACTTTACCTAGGCAA--TTTTCCTAGGCGGGCTTTTAGTAAGAGGACCCGGTGTTCCCAGAAGCC-GTGAGAAGCCCTGGGTAGAGCTGGAGGCTGTGTCACTGAAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1397884 602 + 1464242 gccctatggcttaggagccgaggctcag-----ggagattgaAATCTCTTAG----TGAGTGGAACCCTGCAGAT------TTAAATTAAGTTTT-CTC-AACCCTAACATTTATGATCCTGAAAATCACTTCAGTGTTTTCAGATAAATTCCTTTATCCATCATGTG---G--GCTAGGTACATCCCAAGATGATTATGAGTTCAGCAATCCACTTGTTGATGTAAAGATG------ACTGCTTTACTCCCAGAGG----------TGAATTTATTTGCTGAACAC--TCATAGCCTAGTA--------------GAATCTACTGGTCTATTTGGTCAAAAAATGGGTCATTTTGCTTGTAATTTAACTACTCATTTCAATGAATAAGCCAGC--------------------------CTGTTTGCTCTTGTGCCATGTTCAGTGATGAAATTATCTAG---------AAATACAGCAGTGGATGTTCTGTTTAGCCCAAA-GAGCGCAGGTGGTAGGACTCAGG-TCTGACTCAGACCAGCTGTAGACAGATACACCAGCACAGAGTTCCCCTATGAAAGCCAACAACTTTACCTAGGCAA--TTTTCCTAGGCGGGCTTTTAGTAAGAGGACCCGGTGTTCCCAGAAGCC-GTGAGCAGCCCTGGGTAGAGCTGGAGGCTGTGTCACTGAAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1120547 602 + 81552678 GCCCTATGGCTTAGAAGCCAAGGCTCAG-----GGAGACTAAAATCTCTTCG----TGAGTGGAACCCTGCAGAT------TTAAATTAAGTTTT-CTC-AACCCTAACATTTCTGTTCATGAAAATCACTTCAGTGTTTTCAGATAAATTCCTTTATCCATCATGTG---G--GCTAGGTACATCCCAAGATGATTATGAGTTCAGCAATCCACTTGTTGATGTAAAGATG------ACTGCTTTACTCCCAGAGG----------TGAATTTATTTGCTGAACAG--TCATAGCCTAGTA--------------GAATCTACTGGTCTATTTGGTCAAAAAATGGGTCATTTTGCTTGTAATTTAACTACTCATTTCAATGAATAAGCCAGT--------------------------CTGCTTGCTCTTGTGTCATGTTCAGTGATGAAATTATCTAG---------AAATACAGCAGTGGATGTTCTGTTTAGCCCAAA-GAGCACAGGGGGTAGGACTCAGG-TCTGACTCAGACCAGCTGTGGACAGATACACCAGCATAGAGTTCTCCTATGAAAGCCAACAACTTTACCTAGGCAC--TTTTCCTAGGCAGGCTTTTAGTAAGAGGACCCGGTGTTCCCACAAGCC-GTGAGCAGCCCTGGGTAGAGCTGGAGGCTGTGTCACTGAGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1449760 602 + 108979918 GCCCTATGGCTTAGGAGCCAAGGCTCAG-----GGAGATTAAAATCTCTTAG----TGAGTGGAACCCTGCAGAT------TTAAATTAAGTTTT-ATC-AACCCTAACATTTCTGTTCCTGAAAATCACTTCAGTGTTTTCAGATAAGTTCCTTTACCCATCATGTG---G--GCTCGGTACATCCCAAGATGCCTTTGAGTTCAGCAGTCCACTCACTGATGTAAAGATG------ATCACTTTACTCCCAGAGG----------TGAATTTATTTGCTGAACAG--TCATAGCCTAGTA--------------GAATCTACTGGTCTATTTGGTCAAAAAATGGGTCATTTTGCTTGTAATTTAACTACTCATTTCAATGAATCAGCCAGT--------------------------CTGTTTGCTCTTGTGCCATGTTCAGTGACGAAATTATGTAG---------AAGTACAGCAGTGGATGTTCTGTTTAGCCCAAA-GAGGCCAGGTGGTAGGACTCAGG-TCTGACTCAGACCAGCCGTGGGCAGATACACCAGCACAGAGTTCCCCTACGAAAGCCAGCAACTTTACCTCGGCAA--TTTTCCCAGGCGGGCTTTTAGTAAGAGGACCCGGTGTGCCCAGAAGCC-ATGAGCAGCCCTGGGTAGAGCTGGAGGCTGAGTCACTGAGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1422194 602 - 111193037 gccctacggcttaggagccaaggctcag-----ggagattaaAATCTCTTAG----TGAGTGGAACCCTGCAGAT------TTAAATTAAGTTTT-ATC-AACCCTAACATTTCTGTTCCTGAAAATCACTTCAGTGTTTTCAGATAAGTTCCTTTACCCATCATGTG---G--GCTCGGTACATCCCAAGATGCCTTTGAGTTCAGCAATCCACTCACTGATGTAAAGATG------ATCACTTTACTCCCAGAGG----------TGAATTTATTTGCTGAACAG--TCATAGCCTAGTA--------------GAATCTACTGGTCTATTTCGTCAAAAAATGGGTCATTTTGCTTGTAATTTAACTACTCATTTCAATGAATCAGCCAGT--------------------------CTGTTTGCTCTTGTGCCATGTTCAGTGACGAAATTATGTAG---------AAATACAGCAGTGGATGTTCTGTTTAGCCCAAA-GAGGCCAGGTGGTAGGACTCAGG-TCTGACTCAGACCAGCCGTGGGCAGATACACCAGCACAGAGTTCCCCTACGAAAGCCAGCAACTTTACCTCGGCAA--TTTTCCCAGGCGGGCTTTTAGTAAGAGGACCCGGTGTGCCCAGAAGCC-ATGAGCAGCCCTGGGTAGAGCTGGAGGCTGAGTCACTGAGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1450101 601 + 3644372 GCCCTATGGCTTAGGAGCCAAGGCTCAG-----GGAGATTAAAATCTCTTAG----TGAGTGGAACCCTGCAGAT------TTAAATTAAGTTTT-GTC-AACCCTAACATTTCTGTTCCTGAAAATCACTTCAGTGTTTTCAGATAAGTTCCTTTACCCATCATGTG---G--GCTCGGTACATCCCAAGATGCCTTTGAGTTCAGCAATCCACTCACTGATGTAAAGATG------ATCACTTTACTCCCAGAGG----------TGAATTTATTTGCTGAACAG--TCATAGCCTAGTA--------------GAATCTACTGGTCTATTTGGTC-AAAAATGGGTCATTTTGCTTGTAATTTAACTACTCATTTCAATGAATCAGCCAGT--------------------------CTGTTTGCTCTTGTGCCATGTTCAGTGACGAAATTATGTAG---------AAATACAGCAGTGGATGTTCTGTTTAGCCCAAA-GAGGCCAGCTGGTAGGACTCAGG-TCTGACTCAGACCAGCCGTGGGCAGGTACACCAGCACAGAGTTCCCCTACGAAAGCCAGCAACTTTACCTCGGCAA--TTTTCCCAGGCGGGCTTTTAGTAAGAGGACGCGGTGTGCCCAGAAGCC-ATGAGCAGCCCTGGGTAGAGCTGGAGGCTGAGTCACTGAGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1404354 602 - 10304083 gccctatggcttaggagccaaggctcag-----ggagattaaAATCGCTTAG----TGAGTGGAACTCTGCAGAT------TTAAATTAAGTTTT-CTC-GACCCTAACATTTCTGTTCCTGAAAATCACTTCAGTGTTTTCAGATAAGTTCCTTTACCCATCATGTG---G--GCTCGGTGCATCCCAAGATGCCTTTGAGTTCAGCAATCCACTCACTGATGTAAAGATG------ATCACTTTTCTCCCAGAGG----------TGAATTTATTTGCTGAACAG--TCATAGCCTAGTA--------------GAATCTACTGGTCTATTTGGTCAAAAAATGGGTCATTTTGCTTGTAATTTAGCTACTCATTTCAGTGAATGAGCCAGT--------------------------CTGTTTGCTCTTGTGCCATGTTCAGTGACGAAATTATCTAG---------AAATACAGCAGTGGATATTCTGTTTAGCCCAAA-GAGGCCAGGTGGTAGGACTCAGG-TCTGACTCAGACCAGCCGTGGACAGGTACACCAGCACAGAGTTCCCCTACGAAAGCCAGCAACTTTACCTCGGCAA--TTTTCCCAGGCAGGCTTTTAGTAAGAGGACCCGGTGTGCCCAGAAGCC-ATGAGCAGCCCTGGGTAGAGCTGGAGGCAGAGTCACTGAGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1481101 591 - 107702431 gccctatggcttaggagccaaggctcag-----ggagattaaAATCTCTTAG----TGAGTGGAACCCTGCAGAT------TTAAATTAAGTTTT-CTC-AACCCTAACATTTCTGTTGCTGAAAATCACTTCGGTGTTTTCAGATAAGTTCCTTTACCCATCATGCG---G--GCTCGGTACATCCCAAGATGCCTTTGAGTTCAGCAATCCACTCACTGATGTAAAGATG------ATCACTTTTCTCCCAGAGG----------TGAATTTATTTGCTGAACAG--TCATAGCCTAGTA--------------GAATCTACTGGTCTAGTTGGTCAAAAAATGAATCATTTTGCTTGTAATTTAACTACTCATTTCAATGAATCAGCTAGT--------------------------CTGTTTGCTCTTGTGCCATGTTCAGTGACGAAATTATCTAG---------AAAT--AGCACTGGATGT--TGTTTAGCCCAAA-GAGGCCAGGTGGTAGGACTCAGG-TCTGACTCAGACCAGCCGTGCACAGATATACCAGCACAGAGTTCCCCTATGAAAGCCAGCAACTT------GGCAA--TTTTCCCAGG-GGGGTTTTAGTAAGAGGACCTGGTGTGCCCAGAAGCC-ATGAGCAGCCCTGGGTAGAGCTGGAGGCTGAGTCACTGAGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 964539 602 - 2200435 gccctatggcttaggagccaaggctcag-----ggagattaaAATCGCTTAG----TGAGCGGAACCCTGCAGAT------TTAAATTAAGTTTT-CTC-AACCCTAACATTTCTGTTCCTGAAAATCACTTCAGTGTTTTCAGATAAGTTCCTTTACCCATCATGTG---G--GCTCGGTACATCCCAAGATGCCTTTGAGTTCAGCAATCCACTCACTGATGTAAAGATG------ATCACTTTTCTCCCAGAGG----------TGAATTTATTTGCTGAACAG--TCATAGCCTAGTA--------------GAATCTACTGGTCTATTTGGTCAAAAAATGGGTCATTTTGCTTGTAATTTAACTACTCATTTCAGTGAATGAGCCAGT--------------------------CTGTTTGCTCTTGTGCCATGTTCAGTGACGAAATTATCTAG---------AAATACAGCAGTGGATATTCTGTTTAGCCCAAA-GAGGCCAGGTGGTAGGACTCAGG-TCTGACTCAGACCAGCCGTGGACAGGTACACCAGCACAGAGTTCCCCTACGAAAGCCAGCAACTTTACCTCGGCAA--TTTTCCCAGGCAGGCTTTTAGTAAGAGGACCCGGTGTGCCCAGAAGCC-ATGAGCAGCCCTGGGTAGAGCTGGAggcagagtcactgagg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1402943 585 - 13651311 GCCCTATGGCTTAGGCGCCAAGGCTCAG-----GGAGATT---------------------GGAACCCTGCAGAT------TTAAATTAAGTTCT-CTC-AACCCTAACATTTCTGTTCCTGAAAATCACTTCGGTGTTTTCAGGTAAGTTCCTTTACCCATCATGTG---G--GCTCGGTACATCCCAAGATGCCTTTGAGTTCAGCAATCCACTCGCTGACGTAAAGATG------GTCACTTTTCTCCCAGAGG----------TGAATTTATTTGCTGAACAG--TCATGGCCTAGTA--------------GAATCTATGGGTCTATTTGGTCAAAAAATGGGTCATTTTGCTTGTAATTTAACTACTCATTTCAATGAATCAGCCAGT--------------------------CTGTTTGCTCTTGTGCCATGTTCAGTGACGACATTATCTAG---------AAATACAGCAGTAGATGTTCTGTTTAGCCCAAA-GAGGCCAGGTAGTAGGACTCAGG-TCTGACTCAGACCAGCTGTGGACAGATATACCAGCACAGCGTTCCCCTACGAAAGCCAGCAACTTTACCTTGGCTA--TTTTCCCAGGTGGGCTTTTAGTAAGAGGACCTGGTGTGCCCAGAAGCC-GTGAGCAGCCCTGGGTAGAGCTGGAGGCTGAGTCACTGAGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1401849 530 - 108792865 GCCCTGTGGCTTAGGAGCCAAGGCTGAG-----GGAGACTGAAATCTCTTAG----TGAGTGGAGCCTGGCAGAT------TTAAATTAGGTTTC-CTC-AACCCTCACATTTGT-CTCCTGAAAATCACTTCAGTGCTTTCACGTAAGTGCCTTTATTCGTCCCGTG---G--GCTAGGTACACCCAAAGATGATTATCTGTTCGTCAATAGACTCATTTATGTGAAGATA------ATCACCTTGCTCCCAG------------------------------CAG--TCGGAGCCTAGCA--------------GAATCGACTGGTCTCTTCGGTCAGAAAATGGGTCATTTTCCTTGCAATTTAACTATTCAGTTC------------AGT--------------------------CTGTTTGCTCTTGTG-CATGTTCAGTGATG-AATTATCCAG---------AAATACTGCAGTGGATGTTCTGTTCAG-CCAAA-GAGTGCAGGCGGTAGGACTCAGG-TCTGACTCAGACCAGCCGTGGACAGACACACCAGCACAGAGGT---CTATGAAAGCCAGCA-----------------------------------TCGGAATAGGACTCAGTGTTCCCAGAAGCT-GTGAGCAGCCCTGGAAAGAGCTGGAGGCTGAGTCGCTGAGG i calJac3.chr14 C 0 I 83 s saiBol1.JH378218 1242612 554 - 7082604 GCCCTGGGGCTTAGGAGCCAAGGCTCAG-----GGAGACTAAAATCTCCTAG----TGAGTGGAGCCCTGCAGAT------TTAAATTAGGTTTT-CTC-AACCCTCACGTCTGT-CTCCTGAAAATCACTTCAGTGCTTTCACGTAAGTGCCTTTATTCATCACGTG---G--GCTGGGTGCACCCGAAGACAATCATTCATTCATCAATACACTCCTTTATGTAAAGGTA------ATCACCTTGCTCCCGGAGG----------TGAATTTATTTGCTGAACAG--TCATAGCCTAGTA--------------GAATCGACTGGTCTCTTTGGTCAGAAAATGGGTCATTTTGCTTGCAGTGTAACTATTCAGTTC------------AGT--------------------------CTGGTTGCTCTTGTG-CATGCTCAGTGATGAAATTATCCAG---------AAATACTGCAGTGGATGTCCTGTTCAACCCAAA-GAGTGCAGGCGGTAGGACTCAGG-TCTGACTCAGACCAGCCGTGGACAGACACACCAGCACAGAGTTCTCCTACGAAAGCCAGCA-----------------------------------T-AGAATAGGACTCAGCGTTCCCAGAAGCT-GTGAGCAACCCTGGAAAGAGCAGGAGGCTGAGTCGCTGAGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1325493 555 + 1864846 gccctgtggcttaggagccaaggctcag-----gcagactaaAATCTCTTAG----TGAGTGGAGCCCTGCAGAT------TTAAATTAGGTTTT-CTC-AACCCTCGCATTTGT-CTCCTGAAAATCACTTCAGTGCTTTCAGGTAAGTGCCTTTATTCATCACGTG---G--CCTAGGTACACCCAAAGATGATTATTAGTTCATCAATACACTCATTTATGTAAAGATA------ATCACTTTGCTCCCAGAGG----------TGAATTTATTTGCTGAATAG--TCATAGCCTAGTA--------------GAATCGACTGGTCTCTTTGGTCAGCAAATGGGTCATTTTGCTTGCAGTTTAACTATTCAGTTC------------AGT--------------------------CTGGTTGCTCTTGTG-CATGTTCAGTGATGAGATTATCCAG---------AAATACTGCAGTGGATGTTCTGTTCAGCCCAAA-GAATGCAGGTGGTAGGACTCAGG-TCTGACTCAGACCAACCGTGGACAGACACACCAGCGCAGAGTTCTCCTATGAAAGCCAGCA-----------------------------------TAGGAATAGGACTCAGTGTTCCCAGAAGCT-GTGAGCAGCCCTGGAAAGAGCTGGAGGCTGAGTCGCTGAGG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 130101 555 + 287728 GCCCTGTGGCTTAGGAGCCAAGGCTCAG-----GGAGACTAAAGTCTCTTAG----TGAGTGGAGCCCTGCAGAT------TTAAATTAGGTTTT-CTC-AACCCTCACATTTGT-CTCCTGAAAATCACTTCAGTGCTTTCAGGTAAGTGCCTTTATTCATTACGTG---G--GCTAGGTACACCCAAAGATGATGATTAGTTCATCAATACACTCATTTATGTAAAGATA------ATCACCTTGCTCCCAGAGG----------TGAGTTTATTTGCTGAACAG--TCATATCCTAGTA--------------GAATTGACTGGTCTCTTTGGTCAGAAAATGGGTCATTTTGCTTGCAATGTAACTATTCAGTTC------------AGT--------------------------CTGTTTGCTCTTGTG-CATGTTCAGTGATAAAATTATCCAG---------AAATACTGCAGTGGATGTTCTCTTCGGCCCAAA-GAGTGCAGGCGGTAGGACTCAGG-TCTGACTCAGACCAGCCGTGGACAGACACAGCAGCACAGCGTTCTCCTGTGAAAGCCAGCA-----------------------------------TAGGAATAGGGCTCAGTGTTCCCAGAAGCT-GTGAGCAGCCCTGGAAAGAGCTGGAGTCTGAGTCGCTCAgg i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 941224 497 + 5252280 GGC----AGCCCACGAGC-----CTCTG-----GGAGACTGAAATCACTGGG-----------------GATGAT------TTCAGTAAAGCTCCACCC-TGCTCTCCCCACCCCGGTCTGGACAGTCACATCAGTGTTTTTGAATAAATA-TGTTATTCATCAGGTA---G--GCTTGGTGCATTCAAAGATGCATCTTAATTAATTGATGCTCTCATT-ATGTAAAGATGATGATTATCACTTTACTCCCAGAGG----------TGAATTTCTTCACTAAATAA--TCAAACCC--------------------AGTCTAGTAATCTACTGGGTCAATAAAAAAGTCCTTTTGTTCCCAATTCAACTAGTCACTTCAATGGATGGACCAGC--------------------------CCACTTTCTCTTATCCTGTATTTAGTAAGGATATTCTCCTG---------AAGT--AACAGTGGATGCTGTGTTCA-CCCAAA-G----------------------------------CATGCTGTGGACTGACACAGCACCCCGCACTCC---------AGCCG---------------------TCCTCCAGGTGG--CTGTGGGCACCGGGACCAGTGTTCCCAGATGC---TGGCAAGGACTGGGGAG---CAGAGGCTG----------- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90023420 621 - 120129022 GCCCTGAGGTATAACACCTGTGGATGAGGCACTGAAGGTTAGACACACTCAGCCAATGAGGAGAACAACTGAGAC------TTAAAGTCACTCTC-ATC-TAATTTTATACCTTTTCTCTTGATAAGCTCTTTAGTGTTCTTAAATAAGTTCTTTTATTCATAAGGTGGAAG--ACAAGGTTCA----GAAATGACCATGCATTCATTAATGAATTCACTCATGCACACA--------ACCAGAGGCATACTGGGGGGGGGGGGGCATGAATGCATTCATTTCCTAC--TTGTCCTTTGGTCCAACATTTGCCATTGGGTCCATTGATCTACAGCATCAAAACATGGTCCATCTTGACCCTAGTTTGACTCTTCACATCAGTGGATAACTCGG----------------------------TGTTTGTTTATATGCCACATTCCACAACAGAATGTTCAAAGTGTATGATAAATATAGCA---GGTACTCAGCTCAACATAGATAAGACCAGTTACCAGAAGTGAGGAGCTGACTCAG-TCAACTG---ACACCTTCACCATCATAAAGCTCTCCAATCGAGATTCACCCCTGTACATGGGCAG--TTTTTC-AAGTATCTTTTTAGTGAGAGAGCCAAGTGTTTCTAGTAGTTGGTAAGGACCAGTAGGTAGAGTTGGGTAC------------- i mm10.chr12 I 197 C 0 s dasNov3.JH576208 1740484 595 + 4416731 -attcatagcttagtaactggggctctg-----aaatactgaagtcacacagctggtgagtagaacaatgtagattgctgatgaaattaagcttc-atctaactctatcatcttctcttttcaAA--CACTTCAGTGTTTTCAAAGAAATTCCTTTATTCATCAGTCA---GTAACTAGGTACATTCAAAGATATTTAACAAT----CAATACTCTCATGTACATAAAGATGACAATGACCACTTTCCTCCCTGAGA----------AGCATTTATTTGCAAAACAGACTCACATC--------------------CATTCTACAGATAATTTTGGTCAAAAAATTAATCATTTTGCCCCCTGTTCAACTACT----TCTGTGAATAAACCACTTACATGGGTGTTATGCACACTCAGTCCTGTTCCTTCTTATATTATTTTCAATGATGATACTCATGAG---------AAATACAACAGCTGATGTTCTGGTCAGTCCCAA-GAATGT------------CAAGA-TCTGATGCAGATCAGCT----ACAGAT-CATCTCCACAAAGT---CCTGTGGAGATGAACAGTGTTATTTAGACACTTTTTTTCCAGCTGGTTATTTAGCAAGAGGACAGTGTGTT-CTGGAAGCT--------------GGCAAAGTTAG----TGTG-CACTGAGG i dasNov3.JH576208 C 0 C 0 a score=504886.000000 s hg38.chr2_KI270774v1_alt 137087 67 + 223625 ACGGCTCGGTGCTCCCAGCAGCA--GGGACAAGGCAAT---------TGGGCTCACgctctg-----ctcccactggcttcct s panTro5.chr2A 1424871 67 + 111504155 ACGGCTCGGTGCTCCCAGCAGCA--GGGACAAGGCAAT---------TGGGCTCACGCTCTG-----CTCCCACTGGCTTCCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1373909 67 + 114371477 ACGGCTCGGTGCTCCCAGCAGCA--GGGACAAGGCAAT---------TGGGCTCACgctctg-----ctcccactggcttcct i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1398486 67 + 1464242 ACGGCTCGGTGCTCCCAGCAGCA--GGGATAAGGCAAT---------TGGGCTCACGCTCTG-----CTCCCACtgacttcct i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1121149 67 + 81552678 ACAGCTTGGTGCTCCCAGCAGCA--gggatgaggcgac---------tgggctcacactctg-----ctcccactggcttcct i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1450362 67 + 108979918 ACGGCTCAGTGCTCCCAGCAGCA--GGGACGAGGGGAT---------TGGGCTCACGCTCCG-----CTCCCACTGGCTTCCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1422796 67 - 111193037 ACGGCTCAGTGCTCCCAGCAGCA--GGGACGAGGGGAT---------TGGGCTCACGCTCCG-----CTCCCACTGGCTTCCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1450702 67 + 3644372 ACGGCTCAGTGCTCCCAGCAGCA--GGGACGAGGGGAT---------TGGGCTCATGCTCCG-----CTCCCACTGGCTTCCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1404956 67 - 10304083 ACGGCTCAGTGTTCCCAGCAGCA--gggacgaggggac---------tgggctcacgctccg-----ctcccactggcttcct i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1481692 67 - 107702431 ACGGCTCAGTGCTCCCAGCAGCA--GGGACGAGGGGAT---------TGGGCTCACGCTCTG-----TTCCCACTGGCTTCCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 965141 67 - 2200435 acggctcagtgctcccggcagca--gggacgaggggac---------tgggctcacgctctg-----ctcccactggcttcct i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1403528 67 - 13651311 ACAGCTCAGTTCTCCCAGCAGCT--GGGACGAGGGGAT---------TGGGCTCACGCTCTG-----CTCCCACTGGCTTCCT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1243166 76 - 7082604 GTGGCTTGGTGCCCCCAGCAGCA--GGGCTGAGGGGATTGGGTTCCCTGGGTTCACGCTCTG-----CTCGCACGgactttct i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1326048 76 + 1864846 GCAGCTTGGTGCTCCCAGCAGCA--GGGCCGGGGCGATTGGGTTCACTGGGCTCACGCTCTG-----CTCGCAAGgactctct i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 130656 76 + 287728 gcggcttggtgctcccagcagca--gggacgaggggattgggttcactgggttcacgctctg-----ctcgcatggactttct i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 941721 56 + 5252280 -------------ACCCACAGTG--AGGCCGAACCTGG---------CAGGTGCATGTTCTGCAGCACTTTCATCGCCCT--- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90024041 48 - 120129022 ------CAGGGTTCACGG-AGAA--AGCATAGTATATC---------T--GTCTACCCTTAA-----CTCCCC---------- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1741079 50 + 4416731 AAGATTCAGTGCTCCTGGCAGCATGGGACCAAGACTGC---------CTGGTTCACACT------------------------ i dasNov3.JH576208 C 0 C 0 e calJac3.chr14 1402379 83 - 108792865 I a score=849850.000000 s hg38.chr2_KI270774v1_alt 137154 93 + 223625 gcaagtcgcttgccttcttggcctcagt----tggacaatccctaaagtgggataacactgtcttacccaccttaTGCTCAACAGT--GGACCAGTTCA s panTro5.chr2A 1424938 93 + 111504155 GCAAGTCGCTTGCCTTCTTGGCCTCAGT----TGGACAATCCCTAAAATGGGATAACACTGTCTTACCCACCTTATGCTCAACAGT--GGACCAGTTCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1373976 93 + 114371477 gcaagtcgcttgccttcttggcctcagt----tggacaatccctaaaatgggataacactgtcttacccaccttaTGCTCAACAGT--GGACCAGTTCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1398553 93 + 1464242 gcaagttgcttgccttcttggccttagt----tggacaatccctaaaatgggataacactgtcttacccaccttaTGCTCAACAGT--GGACCAGTTCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1121216 93 + 81552678 gcaagttgcttgccttcttggcctcagt----tggacaatctctaaaatgggataacactgtcttacccaccGTATGCTCAACAGT--AGACCAGTTCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1450429 91 + 108979918 GCAAGTCACTTGCCTTCTTGGC--CAGT------GACAATACTTAAAATGGGATAACACTGTCTTACCCACCTTGTGCTCAATGGTAGAGACCAGTTCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1422863 91 - 111193037 GCAAGTCACTTGCCTTCTTGGC--CAGT------GACAATACTTAAAATGGGATAACACTGTCTTACCCACCTTGTGCTCAATGGTAGAGACCAGTTCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1450769 91 + 3644372 GCAAGTCACTTGCCTTCTTGGC--CAGT------GACAATACTTAAAATGGGATAACACTATCTTACCCACCTTGCGCTCAATGGTAGAGACCAGTTCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1405023 95 - 10304083 gcaagtcacttgccttcttggcctcagt----tggacaatccctaaaatgggataacactgtcttacccaccttgtGCTCAATAGTAGAGACCAGTTCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1481759 91 - 107702431 GCAAGTCACTTGCCTTCTTGGC--CAGT------GACAATCCTTAAAATGGGATAACACTGTCTTACCCACCTTGCGCTCAACGGTAGAGACCAGTTCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 965208 95 - 2200435 gcaagtcacttgccttcttggcctcagt----tggacaatccctaaaatgggataacactgtcttacccaccttgtGCTCAATAGTAGAGATCAGTTCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1403595 91 - 13651311 GCAAGTCACTTGCCTTCTTGGC--CAAT------GACAATCCCTAAAATGGGATAACACTGTCTTACCCACCTTGTGCTTAACAGTAGAGACCAGTTCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1402462 97 - 108792865 GTGAGTTACTTGCCTTCTTGGACTCACTCCTGTGTACTATCCCTAAAATGGGATAACACTGTCTTACCCACCCCAGGCTCAACAGG--AGAGCAGCCCA i calJac3.chr14 I 83 C 0 s saiBol1.JH378218 1243242 92 - 7082604 gcgggttacttgcc-tcttggcctcagt----tggacaatccctaaaatgggataacactgtcttacccaccccaGGCTCAACAGT--AGAGCAGTCCA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1326124 93 + 1864846 gtgagtaacttgccttcttggcctcagt----tggacaatccctaaaatgggataagactgtcttacccaccccaGGCTCAACAGT--AGAGCAGTCCA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 130732 93 + 287728 gcaagttacttgccttcttggcctcagt----tggacaatccctaaaatgggatagcactgtcttacccaccccaGGCTCAGCAGT--ACAGCAGTCCA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 941777 93 + 5252280 gcaagtcactttccttcttagcctcagt----tgcagtgtctctgaaatgggatcgtagtatcttacctacctTGTGCTGGATGCT--GAACCAGTTCA i otoGar3.GL873658 C 0 I 1 s mm10.chr12 90024089 47 - 120129022 -----------------------------------------------ACCAGAT---GTTTCCCTTCCTATTGTTTGCTCAACATT--GGACCAGTTCG i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1741129 76 + 4416731 -----------GCACACTTAAC----------TTGTCCATCTGTAAAATGGGGTATTAATTTATTACTTAGCTTGTGTCAGACACA--GTTCCAGTTGT i dasNov3.JH576208 C 0 C 0 a score=2736279.000000 s hg38.chr2_KI270774v1_alt 137247 297 + 223625 A--CCCCCAAGGCT---------TTTTAAGCTCTCAGTATTATGAGATTGTGATTCTGTAAACCCA---TATTTGCTCAG-A-ATTATTTCACTATTGAGAAAAA-TCAGAGTTCAAGTGTCTTTAA----ATG-A-------------AATtgtgttggttttcta---cc-cagctgtgac------------------------------aaattgctccaaatttagtggctgaaaacaacat--aaatgtgatct-tccaatttcacaatc--agtgtctgat---gtctcac-ttggctgaaatcaaggtgttgcagagctggttctttctggaagctccaggggag-atccctttcctggcaa-ttc--------------------------------------------------cag s panTro5.chr2A 1425031 299 + 111504155 ACCCCCCCGAGGCT---------TTTTAAACTCTCAGTATTATGAGATTGTGATTCTCTAAACCCG---TATTTGCTCAG-A-ATTATTTCACTATTGAGAAAAA-TCAGAGTTCCAGTGTCTTTAA----ATG-A-------------AATtgtgttggttttcta---cc-cagctgtgac------------------------------aaattgctccaaatttagtggctgaaaacaacat--aaatgtgatct-tccagtttcacaatc--agtgtctgat---gtctcac-ttggctcaaatcaaggtgttgcagagctggttctttctgggagctccaggggag-atccctttcctggcaa-ttc--------------------------------------------------cag i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1374069 299 + 114371477 ACCCCCCCGAGGCT---------TTTTAAACTCTCAGTATTATGAGATTGTGAATCTCTAAACCCG---TATTTGCTCAG-A-ATTATTTCACTATTGAGAAAAA-TCAGAGTTCCAGTGTCTTTAA----ATG-A-------------AATtgtgttggttttcta---cc-cagctgtgac------------------------------aaattgctccaaatttagtggctgaaaacaacat--aaatgtgatct-tccagtttcacaatc--agtgtctgat---gtctcac-ttggctcaaatcaaggtgttgcagagctggttctttctgggagctccaggggag-atccctttcctggcaa-ttc--------------------------------------------------cag i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1398646 297 + 1464242 A--CCCCCAAGGCT---------TTTTAAACTCTCAGTATTATGAGATTGTGATTCTCTAAACCCA---TATTTGCTCAG-A-ATTATTTCACTGTTGAGAAAAA-TCAGAGTTCAAGTGTCTTTAA----ATG-A-------------AATtgtgttggttttcta---cc-cagctgtgac------------------------------aaattgctccaaatttagtggctgaaaacaacat--aaatgtgatct-tcc-gtttcacaatc--agtgtctgat---gtctcactttggctcaaatcaaggtgctgaggagctggttctttctgggagctccaggggag-atccctttcctggcaa-ttc--------------------------------------------------cag i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1121309 298 + 81552678 A--CCCCAGAGGCT---------TTTTAAACTCTCATTATTATGAGACTGTGATTCTGTAAATCCA---TATTTGCTCAG-A-ATTATTTCACTATTGAGGAAAA-TCAGAGTTCAAGTGTCCTCAG----ATG-A-------------AATtgtgttggttttcta---ct-cagctgtgac------------------------------aaattgctccaaatttagtggctgaaaacaacat--aaatgtgatct-tccagtttcataatc--agtgtctgat---gtctcac-ttggctcaaatcaaggtgttgcagagctggttctttctaggagctccaggggagaatccctttcctggcaa-ttc--------------------------------------------------cag i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1450520 299 + 108979918 A--CCCTCGAGGCT---------GCTTAAACTCTCAGTATTAGGAGCCTGTGATTCTGTAAACCCA---TATTTGCTCAG-A-ATTATTTCACTGTTGAGAAAAA-TCAGAGTTCAAGTATCCTTAA----ATGTA-------------AATtgtgttagttttctc---ct-cagctgtgac------------------------------aaattactccaaatttagtggctgaaaacaacat--aaatgtgatct-tccagtttcgtaatc--agtgtctgat---gtctcac-ttggctcaaatccaggtgtcgcagagctggttccttctaggggttccagtggagaacccctttcctggcaa-ttc--------------------------------------------------cag i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1422954 299 - 111193037 A--CCCTCGAGGCT---------GCTTAAACGCTCAGTATTAGGAGCCTGTGATTCTGTAAACCCA---TATTTGCTCAG-A-ATTATTTCACTGTTGAGAAAAA-TCAGAGTTCAAGTGTCCTTAA----ATGTA-------------AATtgtgttagttttctc---ct-cagctgtgac------------------------------aaattactccaaatttagtggctgaaaacaacat--aaatgtgatct-tccagtttcgtaatc--agtgtctgat---gtctcac-ttggctcaaatccaggtgtcgcagagctggttccttctaggggttccagtggagaacccctttcctggcaa-ttc--------------------------------------------------cag i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1450860 299 + 3644372 A--CCCTCGAGGCT---------TCTTAAACTCTCAGTATTAGGAGCCTGTGATTCTGTAAACCCA---TATTTGCTCAG-A-ATTATTTCACTGTTGAGAAAAA-TCAGAGTTCAAGTGTCCTTAA----ATGTA-------------AATtgtgttagttttctc---ct-cagctgtgac------------------------------aaattactccaaatttagtggctgaaaacaacat--aaatgtgatct-tccagtttcgtgatc--agtgtctgat---gtctcac-ttggctcaaatccaggtgtcgcagagctggttccttctaggggttccagtggagaacccctttcctggcaa-ttc--------------------------------------------------cag i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1405118 299 - 10304083 A--CCCCCAGGGCT---------TCTTAAACTCTCAGTATTAGGAGCCTGTGATTCTGTAAACCCA---TATTTGCTCAG-A-ATTATTTCACTGTTGAGAAAAA-TCAGAGTTCAAGTGTCCTTAA----ATGTA-------------AATtgtgttagttttctc---ct-cagctgtgac------------------------------aaattactccaaatttagtggctgaaaacaacat--aaatgtgatct-tccagtttcgtaatc--agtgtctgat---gtctcac-ttggctcaaatccaggtgtcgcagagctggttccttctgggggttccagtggagaacccctttcctggcaa-ttc--------------------------------------------------cag i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1481850 298 - 107702431 A--CCCCCGAGGCT---------TCTTAAACTCTCTGTATTATGAGCCTGTGATTCTGTAAACCCA---TATTTGCTCAG-A-ATTATTTCACTGTTGAGAAAAA-TCAGAGTTCAAGTGTCCTTAA----ATGTA-------------AATtgtgttagttttcta---ct-cagctatggc------------------------------aaattactccaaattcagtggctgaaaacaacat--aaatgtgatct-tccagtttcgtaatc--agtgtctgat---gtctcac-ttggctcaaatccaggtgtcgcagagctggttccttctgggggcttcag-ggagaacccctttcctggcaa-ttc--------------------------------------------------caa i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 965303 299 - 2200435 A--CCCCCAGGGCT---------TCTTAAACTCTCAGTATTAGGAGCCTGTGATTCTATAAACCCA---TATTTGCTCAG-A-ATTATTTCACTGTTGAGAAAAA-TCAGAGTTCAAGTGTCCTTAA----ATGTA-------------AATtgtgttcgttttctc---ct-cagctgtgac------------------------------aaattactccaaatttagtggctgaaaacaacat--aaatgtgatct-tccagtttcgtaatc--agtgtctgat---gtctcac-ttggctcaaatccaggtgtcgcagagctggttccttctgggggttccagtggagaacccctttcctggcaa-ttc--------------------------------------------------cag i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1403686 299 - 13651311 A--CCCCCGAGGCT---------TCTTAAACTCTCAGTAGTATGAGCCTATGATTCTGTAAACCCA---TATTTGCTCAG-T-ATTATATCACTGTTGAGAAAAA-TCAGAGTTCAAGTGTCCTTAA----ATGTA-------------AGTtgtgtcagttttcta---ct-cagctgtgac------------------------------aaattactccaaatttagtggctgaaaacaacat--aaatgtgatct-tccagttttgtaatc--agtgtctgat---gtctcac-ttggcttaaatcaaggtgtggcagagctggttctttctgggagttccagtggagaacccctttcctggcaa-ttc--------------------------------------------------cag i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1402559 298 - 108792865 A--CCCCTGAGGCT---------T-TTGAACTCTTGGTATTATAAGAC--TCATTCTATAAA-CCA---TGTTTGCTAAGAA-ATTATTTCACTACTGAGAAAAA-TCAGAGTTCAAG--TCCTTAAATATATATA-------------AATCgtgttggtttccta---ct-gagctctgag------------------------------aaattactccaactttagtggctgaaaccaacct---cacatcctct-tccagtttcgggatc--agtgtctcgt---gtctgac-tgggctcaaatcaaggtgtcacaaggctggttccttctggcgccttcaggggagaatccctttcctggagatttc--------------------------------------------------cag i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1243334 295 - 7082604 A--CCCCTGAGGCT---------T-TTGAACTCTCAGTATTATAAGACTGTGATTCTATAAACCCA---TGTTTGCTAAG-A-ATTATCTCACTACTGAGAAAAA-TCAGAGTTCAAG--TCCTTAA----ATATC-------------AATtgtgttagtttctta---ct-gagctgtgac------------------------------gaattactcc-actttagtggctggaaccgacct---aacatcctct-tccagttttgtgatc--agtgtctgat---gtctcac-tgagctcaaaccaaggtgtcaaaaggctggttccttctggggccttcaggggagcgtccctttcctggggatttc--------------------------------------------------cag i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1326217 296 + 1864846 A--TCCCTGAAGCT---------T-CTGAACTCTCAGTATTATAAGACTGTGATTCTATAAACCCA---TGTTTGCTAAG-A-ATTATTTCACTACTGAGAAAAA-TCAGAGTTCAAG--TCCTTAA----ATATA-------------AATtgtgttcgtttccta---ct-gagctgtgac------------------------------aaattactccaactttagtggcagaaaccaacct---aacatcctct-tccagtttcgtggtc--agtgtctgat---gtctcgc-tgggcccaaatcaaggcgtcacaaggctggttccttctggggccttcaggggagaatccctttcctggagatttc--------------------------------------------------cag i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 130825 296 + 287728 A--CCCCTGAGGCT---------T-TTGAACTCTCAGTATTATAAGACTGTGATTCTATAAACCCA---TGTTTGCTAAG-A-GTTATTTCACTACTGAGAAAAA-TCAGAGTTCAAG--TCCTTAA----ATATA-------------CATtgtgttagtttccta---ct-gagctgtgac------------------------------aaattactccaactttagtggctgaaaccaacct---aacatcctct-tccagtttcgtgatc--agtgtctgat---gtctcac-tgggctcaaatcaaggtgtcacaaggctggttccttctggggccttcaggggagaatccctttcctggagatttc--------------------------------------------------cag i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90024136 386 - 120129022 A--ATCCTGAGGTC---------TTTTGAGCTCTT----TACTGAGACTGAAACTGTACAAATTTGTATTATTTGTTTAT-ATATTA--TCATCATTTACAAGAA-TCAGCACTTAACTGTGTTTAC----ATGTAGCCTTTTATTCTTGATTTTATTCGTTTTTTATTTCT-TAATTTTTATTCTTTTCTttcatttcttgattttattctaaaattaataaagttttggtgact-atactaacac--agattttagatgttcagttctgtag-------gtcaaaa---gcctaaa-gtgtctaaagtca--gtgtcccaggactgtgtcctttgagaggctctcgtggggaatcccactccttgact-ttCGCACATTTGTTTGTGGTTGGGGTGCTGAGCTTCACACACGTAACACAAGACAG i mm10.chr12 C 0 I 43 s dasNov3.JH576208 1741205 308 + 4416731 A--TTTCTGAAGTTGTTTTTTTCTTTTTAACTCTAAGTATTATGAGACTATTATTCT-TGAACCCA---CATTTGCTCAG-A-ATTATGTAACTACTCACAAAAACTCAGCACTCAAGTGTCTTCAA----ATATA-------------GGCtgcattagttttcta---ttgctaccacaac------------------------------aaattactataaccctagtggcttaaaacaacactcatatatgatct-tacagttatgtaggccagaagtctggcatggtctcac-tgggcaaaaatatcagcac---------attcctttctagaggctctagagaagagtccatttccttgccttttt--------------------------------------------------cag i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 941870 1 + 5252280 I a score=1436631.000000 s hg38.chr2_KI270774v1_alt 137544 153 + 223625 cttctggagg-tgcctgcatcccctggctcatggcccct----ccttccaagccagcaatgttgtctgtctctgtgcctttgttt-----ggagtcacatctcc--acctc----ccgtcaggagagggcctccaactt-taaggacccatgtgactggattggacac-------------------------------tc s panTro5.chr2A 1425330 153 + 111504155 cttctggagg-tggctgcatcccctggctcatggctcct----ccttcgaagccggcaatgttgtctgtctctgtgcctttgttt-----ggagtcacatctcc--acctc----ccgtcaggagagggcctccaactt-taaggatccatgtgactggattggacac-------------------------------tc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1374368 153 + 114371477 cttctggagg-tggctgcatcccctggctcatggcccct----ccttcgaagccagcaatgttgtctgtctctgtgcctttgttt-----ggagtcacatcttc--acctc----ccgtcaggagagggcctccaactt-taaggatccatgtgactggattggacac-------------------------------tc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1398943 153 + 1464242 cttctggagg-tgcctgcatcccctggctcatggcccct----ccttccaagccggcaatgttgtctgtctctgtgcctttgttt-----agagtcacatctcc--acctc----ccgtcaggagagggcctccaactt-taaggatccatgtgactggattggacac-------------------------------tc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1121607 153 + 81552678 cttctggagg-tgcctgcatcccctggctcacggtccct----ccttcaaagccagcaatgttgtatgtctctgtgcctttgttt-----agagtcacatctcc--acctc----cagtcaggagagggcctccaactt-taaggatccatgtgactggattggacac-------------------------------tc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1450819 150 + 108979918 -tcctggagg-tgcccgcatcccctggctcgtggcctct----ccttcaaagccagcaatgt--tgtgtgtctgtgccgttgttt-----agagtcacagctcc--acctc----cagtcaggagagggcctccaactt-taaggactcaggtgattggactggacat-------------------------------tc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1423253 150 - 111193037 -tcctggagg-tgcccgcatcccctggctcgtggcccct----ccttcaaagccagcaatgt--tgtgtgtctgtgccgttgttt-----agagtcacagctcc--acctc----cagtcaggagagggcctccaactt-taaggactcaggtgattggactggacac-------------------------------tc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1451159 150 + 3644372 -tcctggagg-tgcccgcatcccctggctcgtggcccct----ccttcaaagccagcaatgt--tgtgtgtctgtgctgttgttt-----agagtcacagctcc--acctc----cagtcaggagagggcctccaactt-taaggactcaggtgattggactggacac-------------------------------tc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1405417 149 - 10304083 -ttctggagg-tg-ctgcatcccctggctcgtggcccct----ccttcaaagccagcaatgt--tgtgtgtctgtgcctttgttt-----agggtcacagctcc--acctc----cagtcaggagagggcctccaattt-aaaggacccaggtgattggactggacac-------------------------------tc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1482148 152 - 107702431 -ttctggagg-tgcccgcatcccctggctcgtggcccct----ccttcaaagccaggaatgttgtgtgtctctgtgcctttgttt-----agagtcacagctcc--acctc----cagtcaggagagggcctccaactt-taaggacccaggtgattggactggacac-------------------------------tc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 965602 150 - 2200435 -tcctggagg-tgcccgcatcccctggctcgtggcccct----ccttcaaagccagcaatgt--tgtgtctctgtgcctttgttt-----agggtcacagctcc--acctc----cagtcaggagagggcctccaactt-taaggacccaggtgattggactggacac-------------------------------tc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1403985 152 - 13651311 -ttctggagg-tgcccgcgtcctctggctcgtggcccct----ccttcaaagccagcaatgttgtatgtctctgtgcctttgttt-----agagtcacagctcc--acctc----cagtcaggagagggcctccagctt-ttaggacccaggtgattggactgaacac-------------------------------tc i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1402857 149 - 108792865 cttctggaag-tgcccacatcccctggctcatgg-cccc----ccttcaaagccagcaacgttgtctgtctctgtgcctttgttc-------agtcacatctcc--acctg----tggtcaggagagggcc-ccaactt-taaggacccacgtgactagattggacac-------------------------------tc i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1243629 151 - 7082604 cttctggaag-tgcccacat-ccctggctcatgg-ccct----gcttcaaagccagcaacgttgtctgtctctgtgcctttgttt-----agagttgcatctcc--acctg----tggtcaggtgagggcctccagctt-tgaggacccacgtgactagactggacac-------------------------------tc i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1326513 122 + 1864846 cttctggaac-tgcccacagcccctggctcatggccccc----ccttcaaagccagcaacgttgtcTGTCTCTGT------------------------------------------GTCAGGAGAGGgcctccaactt-taaggacccacgtgactagattggacac-------------------------------tc i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 131121 153 + 287728 cttctggaag-tgcccacatctcctggctcatggccccc----ccttcaaaaccagcaacattgtctgtctctgtgcctttgttt-----acagtcacatctcc--acctg----ttgtcaggaaagggcctccaactt-taaggacccacgtgaccagattggacac-------------------------------tc i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 941871 177 + 5252280 CTCCTGAGG-----CCACACACCTTGGCTCAGGGCTCCC----CC-TAACAGCCACCAGCCC--AGACTCCCCGTGCCTTCCTCC------CAGACACTTCCCCCTGACTC----CAGTCAGGAAAGGGCCT-TGACCT-TCAGGACCCACGTGATTAGCATGGACATCTCAACGTGCTCTTTTCTTGTAAAGTTGGTATT i otoGar3.GL873658 I 1 C 0 s mm10.chr12 90024565 159 - 120129022 CTTCTAAAGG-CTACACGATGGCCTACTCTATGACTCCT----CCAACGAAGTCTGCAAGGTGGAATCTATCCATCCATGTCTTCCACCCCAAGTCACAACTCTCTAACAA----TGGTCAAGA-AGGCTCTCAAAAAT-TAAAGACCCATGTGACCAGACTGAATAT-------------------------------CT i mm10.chr12 I 43 I 4 s dasNov3.JH576208 1741513 163 + 4416731 cttctagaggacactcacattcccggactggtggtctccaccatcttcaaagccaacgatgttgcatctctctggtcttgctttc-----atagtcactcctca--tgctgagcacagacaagaaagtttctcagacttgtaaggactcatgcgattgcgttgggccc-------------------------------ct i dasNov3.JH576208 C 0 C 0 a score=4898371.000000 s hg38.chr2_KI270774v1_alt 137697 538 + 223625 -gtggagacccagg-------------acaaccttcccatctcaaggcccttaatgtaatcgcatcag--------------------------------------caGGCTCCAAGGATTAGCGAATGGATGT-TGTGCGAGAGGCA---TTTTTCTGCCT-CCACAGATGAcccactgaccctcaaagattcatacccagtccacatgcctaacatgctcaccccattccaaggttcccccaaaccccatcccatgacggcaccaactctaggcccaaaatccaatc------------------------caaatctcatcacataaatcatccacatcag--gtagggcaggctcagggtaagatccatccaggacaaaattcctctccatctggacctagcctgtgagacagggaagcttgtcgtctgctctccagatgccctggcggaacggtgttaaacataacagcaacagatgtctgcgtggagaatggaaa----------ggaaggg-----------gagtcactcctcccaacccacgtggaaatccagccaagcaac-tcccttaggcttcaaggccaaggagtactcgcttgtggctgga---------------------ggctctgccctctgagtcATGAACTCAA s panTro5.chr2A 1425483 541 + 111504155 -gtggagacccagg-------------acaaccttcccatctcaaggcccttaatgtaatcgcatcgg--------------------------------------caGGCTCCAAGGATTAGCGAATGGATGT-TGTGTGAGAGGCATTTTTTTTCTGCCT-CCACAGATGAcccactgaccctcaaagattcatacccagtccacatgcctaacatgctcaccccattccaaggttcccccaaaccccatcccatgacggcaccaactctaggcccaaaatccaatc------------------------caaatctcaccacataaatcatccacatcag--gtagggcaggctcagggtaagatccatccaggacaaaattcctctccatctggacctagcctgtgagacagggaagcttgtcgtctgctctccagatgccctggcggaacggtgttaaacataacagcaacagatgtctgcgtggagaatggaaa----------ggaaggg-----------gagtcactcctcccaacccacgtggaaatccagccaagcaac-tcccttaggcttcaaggccaaggagtactcgcttgtggctgga---------------------ggctctgccctctgagtcATGAACTCAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1374521 541 + 114371477 -gtggagacccagg-------------acaaccttcccatctcaaggcccttaatgtaatcgcatcgg--------------------------------------caGGCTCCAAGGATTAGCGAATGGATGT-TGTGCGAGAGGCATTTTTTTTCTGCCT-CCACAGATGAcccactgaccctcaaagattcatacccagtccacatgcctaacatgctcaccccattccaaggttcccccaaaccccatcccatgacggcaccaactctaggcccaaaatccaatc------------------------caaatctcaccacataaatcatccacatcag--gtagggcaggctcagggtaagatccatccaggacaaaattcctctccatctggacctagcctgtgagacagggaagcttgtcgtctgctctccagatgccctggcggaacggtgttaaacataacagcaacagatgtctgcgtggagaatggaaa----------ggaaggg-----------gagtcactcctcccaacccacgtggaaatccagccaagcaac-tcccttaggcttcaaggccaaggagtactcgcttgtggctgga---------------------ggctctgccctctgagtcATGAACTCAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1399096 537 + 1464242 -gtggagacccagg-------------acaaccttcccatctcaaggcccttaatgtaatcgcatcgg--------------------------------------caGGCTCCAAGGATTAGCGAATGGATGT-TGTGCGAGAGGCA---TTTTTCTGCCT-CCACAGATGACCCATTGAccctcaaagattcatacccagtccacatgcctaacatgctcaccccattccaagattcccccaaaccccatcccatgacggcaccaactctaggccc-aaatccaatc------------------------caaatctcaccacataaatcatccacatcag--gtagggcaggcttagggtaagatccatccaggacaaaattcctctccatctggacctagcctgtaagacagggaagcttgtcgtctgctctccagatgccctggaggaacggtgttaaacgtaacagcaacagatgtctgggtggagaaaggaaa----------ggaaggg-----------gagtcactcctcccaacccacgtggaaatccagccaagcaac-tcccttaggcttcaaggccaaggagtactcgcctgtggctgga---------------------ggctctgccctctgagtcATGGACTCAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1121760 538 + 81552678 -acggagacccagg-------------acaactttcccatctcaaggcctttaatgtaatcgcgtcgg--------------------------------------caGGCTCCAAGGATTAGCGAATGGAGGT-TGTGCGAGAGGCA---TTTTTCTGCCT-CCACAAATGAcccactgaccctcaaagattcatacccagtccacatgcctaatatgcttaccccattccaagcttcccccaaaccccatcccatgacagcaccaactctaggcccaaaatccaatc------------------------caaatctcaccacataaatcatccacatcag--gtagcgcaggctcagggtaagatccatccaggacaaaattcctctccatctggacctagcctgtgagacggggaagcttgttatctgctctccagatgccctggcggaacggtgttaaacataacagccacagacatctgggtggagaaaggaaa----------gaaaggg-----------gagtcactcctcccaacccacagggaaatccagccaagcaac-tcccttaggcttcaaggccaaggagtactcgcctgtggctgga---------------------ggctctgccctctgagtcACGGACTCAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1450969 537 + 108979918 -gtggagacccagg-------------acaaccttcccatc-caaggcccttaatgtaattgcatccg--------------------------------------caGGCTCCAAGGATTCGCGAATGGATGT-TGTGCGAGAGGCA---TTTTTCTGCCT-CCACAAATGAcccactgaccctcaaagattcatggcctgtcctcatgcataacatgctcaccccatcccaaggttcccccaaaccccatcccatgacagcaccaactccaggcccaaaatccaatc------------------------caaatctcaccatataaatcatccacatcag--gtagggcaggctcagggtaagatccatccaggacaaaattcctctccatctggacctagcctgtgagacagggaagcctgtcgtctgctctccagatgccctggcagaacggtgttaaacgtaacagcagcagacatctgggtggagaaaggaaa----------ggaaggg-----------gagttgctcctcccaacccacgtggaaatccagccaagcaacatcccttaggcttcaaggccaaggagtaat-gcctgtggctgga---------------------ggctctgccctctgagtcATGGACTCAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1423403 537 - 111193037 -gtggagacccagg-------------acaaccttcccatc-caaggcccttaatgtaattgcatccg--------------------------------------caGGCTCCAAGGATTCGCGAATGGATGT-TGTGCGAGAGGCA---TTTTTCTGCCT-CCACAAATGAcccactgaccctcaaagattcatggcctgtcctcatgcataacatgctcaccccatcccaaggttcccccaaaccccatcccatgacagcaccaactccaggcccaaaatccaatc------------------------caaatctcaccatataaatcatccacatcag--gtagggcaggctcagggtaagatccatccaggacaaaattcctctccatctggacctagcctgtgagacagggaagcctgtcgtctgctctccagatgccctggcagaatggtgttaaacgtaacagcagcagacatctgggtggagaaaggaaa----------ggaaggg-----------gagttgctcctcccaacccacgtggaaatccagccaagcaacatcccttaggcttcaaggccaaggagtaat-gcctgtggctgga---------------------ggctctgccctctgagtcATGGACTCAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1451309 537 + 3644372 -gtggagacccagg-------------acaaccttcccatc-caaggcccttaatgtaattgcatccg--------------------------------------caGGCTCCAAGGATTCGCGAATGGATGT-TGTGCGAGAGGCA---TTTTTCTGCCT-CCACAAATGAcccactgaccctcaaagattcatggcctgtcctcatgcataacatgctcaccccatcccaaggttcccccaaaccccatcccatgacagcaccaactccaggcccaaaatccaatc------------------------caaatctcaccatataaatcatccacatcag--gtagggcaggctcagggtaagatccatccaggacaaaattcctctccatctggacctagcctgtgagacagggaagcctgtcgtctgctctccagatgccctggcagaacagtgttaaacgtaacagcagcagacacctgggtggagaaaggaaa----------ggaaggg-----------gagtcgctcctcccaacccacgtggaaatccagccaagcaacatcccttaggcttcaaggccaaggagtaat-gcctgtggctgga---------------------ggctctgccctctgagtcATGGACTCAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1405566 537 - 10304083 -gtggagacccagg-------------acaaccttcccatc-caaggcccttaatgtaatcgcatccg--------------------------------------caGGCTCCAAGGATTCGTGAATGGATGT-TGTGCGAGAGGCA---TTTTTCTGCCT-CCACAGATGAcccactgaccctcaaagattcatgccccgtcctcgagcataacatgctcaccccatcccaaggttcccccaaaccccatcccatgacagcaccaactccaggcccaaaatccaatc------------------------caaatctcgccatataaatcatccacatcag--gtagggcaggctcagggtaagatccatccaggacaaaattcctctctatctggacctagcctgtgagacagggaagcctgtcgtctgctctccagatgccctggcagaacagtgttaaacataacagcagcagacatctgggtggagaaaggaaa----------ggaaggg-----------gagtcgctcctcccaacccacgtggaaatccagccaggcaacatcccttaggcttcaaggccaaggagtaat-gcctgtggctgga---------------------ggctctgccctctgagtcATGGACTCAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1482300 539 - 107702431 -gtggagacccagg-------------acaaccttcccatctcaaggcccttaatgtaatcgcatccg--------------------------------------caGGCTCCAAGGATTCGCGAATGGATGT-TGTGCGAGAGGCG---TTTTTCTGCCT-CCACAGATGAcccactgaccctcaaagattcatggcccgtcctcgtgcacagcatgctcaccccatcccaaggttcccccaaaccccatcctgtgacagcaccaactccaggcccaaaatccaatc------------------------caaatttcgccatataaatcatccacatcag--gtagggcaggctcagggtaagatccatccaggacaaaattcctctccatctggacctagcctgtgagacagggaagcctgtcgtctgctctccagatgccctggcagaacggtgttaaacgtaacagcagcagacgtctgggtggagaaaggaaa----------ggaaggg-----------gagtcgctcctcccaacccacgtggaaatccagccaggcaacgtcccttaggcttcaaggccaaggagtaatcgcctgtggctgga---------------------ggctctgccctctgagtcAGGGACTCAA i chlSab2.chr14 C 0 I 7 s manLeu1.NW_012103754v1 965752 537 - 2200435 -gtggagacccagg-------------acaaccttcccatc-caaggcccttaatgtaatcgcatccg--------------------------------------caGGCTCCAAGGATTCGCGAATGGATGT-TGTGCAAGAGGCA---TTTTTCTGCCT-CCACAGATGAcccactgaccctcaaagattcatgccccgtcctcgagcataacatgctcaccccatcccaaggttcccccaaaccccatcccatgacagcaccaactccaggcccaaaatccaatc------------------------caaatctcgccatataaatcatccacatcag--gtagggcaggctcagggtaagatccatccaggacaaaattcctctccatctggacctagcctgtgagacagggaagcctgtcgtctgctctccagatgccctggcagaacggtgttaaacataacagcagcagacatctgggtggagaaaggaaa----------ggaaggg-----------gagtcgctcctcccaacccacgtggaaatccagccaggcaacatcccttaggcttcaaggccaaggagtaat-gcctgtggctgga---------------------ggctctgccctctgagtcATGGACTCAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1404137 539 - 13651311 -gtggagacccggg-------------acaaccttcccatctcaaggcccttaatgtaatcgcatccg--------------------------------------caGGCTCCAAGGATTCGTGAATGGATGT-TGTGCAAGAGGCA---TTTTTCTGCCT-CCACAGATGAcccactgaccctcaaagattcacgccccgtcctcgtacgtaacatgctcaccccatcccacggttcccccaaaccccatcccatgacagcaccaactccaggcccaaaatccaatc------------------------caaatctcgccatataaatcatccacatcag--gtagggcaggctcagggtaagatccatccaggacaaaattcctctccatctggacctagcctgtgagacagggaagcctgtcgtctgctctccagatgccctggcagaacggtgttaaacgtaacagcagcagacgtctgggtggagaaaggaaa----------ggaaggg-----------gagtcactcctcccaacccacatggaaatccagccaggcaacgtcccttaggcttcaaggccaaggagtaatcgcctgtggctgga---------------------ggctctgccctctgagtcATGGACTCAA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1403006 451 - 108792865 -atggagacccagg-------------acagtctcctcgtctcaaggcccttaatgtaattgcatctg--------------------------------------caGGTGCCAAGGATTAGCGAGTGGATG-----GTGGGAGGCG---TTTTtc-------------tgacccacgga-cctccaagattcatgcctagtccacaggtgtaacaagctcgcttcatcccaagactcccccaaatcccatcccattatagcaccaagtctaggtccaaaacccaatc------------------------caaatctcgtcatggaaatcatccacatcag--ataggagaggctcagggtaagatccatgcagaac-agagtcctctccacctggacctaacctgtgagacggggaagcca---gtctgctctccagatgccctggcagaatggcctcaaacataacagcaacagatgtgtgggtggagaagggaaa---------------gg-----------gagtcccagctcccgccccatgtggaaatccaaccaggcaaactccctcagg----------------------------------------------------------------------------------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1243780 502 - 7082604 -atgcagacccagg-------------accgtctcctcgtctcaaggcccttaacgtaactgcatctg--------------------------------------caGGCCCCAAGGATTAGCGAGTGGATG-----GTGGGAGGTG---GTTTTC-------------TGAcccactgaccctccaagattcatacc-attccacaagtataacaagctcacatcatcccaagactcccccaaatcctatcccatgacagcagcaactccaggtccaaaacccaatc------------------------caaatttcttcacggtaatcatccacatcaa--ataggagaggctcagggtaagatccatccagagc-agattcctcgacatctggacctaacctgtgagacggggaagccagctgtctgctctccagatgccctggcggaatggcctcaaacatcaccgcaacagatgtgtgggtggagaagggaaa---------------gg-----------gagtcccagctcctgccccatgtggaaatccaaccaggcaaattccctcaggtttcagc--------------gcctgTGGCTGTA---------------------GGCTCTGCCCTCTGCAACATGGAGTCAA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1326635 503 + 1864846 -atggagacccagg-------------acaatctcctcgtctcaaggcccttaatgtaattgcatctg--------------------------------------caGGCTCCAAGGATTAGCGAGTGGGTG-----GTGGAAGGCA---TTTTTC-------------TGAcccactgaccctccaagattcacacctagtccacaagcataacaagctcatgtcatcccaagactcccccaaatcccatcccattatagcaccaactctaggtccaaaacccaatc------------------------caaatctcatcatggaaatcatccacatcag--ataggagaggctcagggtaagatccatccagaac-agattcctctccatctggacctaacctgtgagatggggaagccagctgtctgctctccagatgccctggcagaatggcctcaaacataacagcaacagatgtgtgggtggagaagggaaa---------------gg-----------gggtcccagctcctgccccatgtggaaatccaaccaggcaaactccctcaggtttcagg--------------gcctgtggctgga---------------------ggctctgccctctgCAGCATGGAGTCAA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 131274 486 + 287728 -acggagacccagg-------------acagtctcctcgtctcacgacctttcatgtaattgcatctg--------------------------------------caGGCTCCAAGGATTAGCGAGTGGATG-----CTGGGAGGCG---TTTTGC-------------TGacccactgaccccccaagattcatacctagtccacagg----------------catcgcaagactcccccaaatcccatcccattacagcaccaactctaggtccaaaacccagtc------------------------caaatctcgtcatggaaatcatccacatcag--ataggagaggctcagggtaagatccatccagaac-agattcctctccatct-gacctgacctgtgagatggggaagccagctgtctgctctccagaggccctggcagaatggcctcaaacatgacagcaacagatgtgtgggtggagaagggaaa---------------gg-----------gagtcccagcccctgccccatgtggaaatccaaccaggcaaactccctcaggttccagg--------------gcctgtggctgga---------------------ggctctgccctctgCAACATGGAATCAA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 942048 527 + 5252280 -TTGGAGTTGTAGGAATTATTTAAAGAACATTGTTCCTGTT------TCTCACATATAATCACGTCT---------------------------------------TGGGTTCTGAGTTTTAGGGCATGGACGTATGTGGGGAAGGCA---CCGTCCTACCTGCCTTGGGccgccctctgatccccaaatgctgaaatccacttcacatgaacatcaca-tccccccatctcaaggg--ccccaaaccccctcccattacagtatcaatgcggtgttcaaaatccaatc------------------------caaatct---caggccaagtgtgtaagtgaa--gaaggg-aggccgtgggtgtgacctgcctgggacaag----------gtctgg-----gtctgtggcacaggaaa--tggctgtgtggtccctaaacacactttgagatagacatgaga--tagctgt-gtagatgccccactggagaaaggaagaaatgggaaggaaacgg-----------gaaactctgatcccaggccttctggaaat-cagctgggcaaactccagcaggttaccag-cggtgagatcatgccccatggc-aga---------------------ggctctgccctGCCAGTCACAGACTGAA i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1741676 599 + 4416731 ctgggcaatccagg-------------atactcttc-catctcaaggtccttaactgaatcatatttacaaagtccctttttccatgtaaggtaaaaatatattcccaggttccaaggactagagggtagatat-----------------cttttctgccaaccacaGATGTTTTATAG--TATccgaaattcacagctgaccctcaagtaaactacattcattgccacccaaggt--------------ccccattacagcatcaactcaaaatccaaaatctcatctaagtctcatcagctcaaaattctcaaatctcattatctaaattaccggaattagtaatgcgtaaggttctggatgcagttctccttgggccaaattcctctccatcagga-----cttgtgaaacttggaaacaagttatctgcacccagaatacaatggctggatgggcataat--ttaaagttatagatattccagttttaaaaaggaa----------gaaatggagagaaagacagagtaacttgtcccaagcaatttcaaaacccagcccggcaaccttcatt-gtcttccaggcctgggaacccacccgtgtggctcgaggtgccagcttctcggcttggggcTCCACCCTttgagtcacatgctcta i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90024724 4 - 120129022 I a score=25764.000000 s hg38.chr2_KI270774v1_alt 138235 29 + 223625 CTGTCCTAAAGCCTGGCT----GTTTTGTCAAT s panTro5.chr2A 1426024 29 + 111504155 CTGTCCTAAAGCCTGGCT----GTTTTGTCAAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375062 29 + 114371477 CTGTCCTAAAGCCTGGCT----GTTTTGTCAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1399633 29 + 1464242 CTGTCCTAAAGCCTGGCT----GTTTTGTCAAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1122298 29 + 81552678 CCGTCCTAAAGCCTGGCT----GTTTTGTCAGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1451506 3 + 108979918 ------------------------------AAT i rheMac8.chr13 C 0 I 4 s macFas5.chr13 1423940 3 - 111193037 ------------------------------AAT i macFas5.chr13 C 0 I 4 s macNem1.NW_012011978v1 1451846 3 + 3644372 ------------------------------AAT i macNem1.NW_012011978v1 C 0 I 4 s cerAty1.NW_012000820v1 1406103 3 - 10304083 ------------------------------AAT i cerAty1.NW_012000820v1 C 0 I 4 s manLeu1.NW_012103754v1 966289 3 - 2200435 ------------------------------AAT i manLeu1.NW_012103754v1 C 0 I 4 s colAng1.NW_012118821v1 1404676 3 - 13651311 ------------------------------AAT i colAng1.NW_012118821v1 C 0 I 4 s calJac3.chr14 1403457 26 - 108792865 ---tcccaaagcctggct----gttttgtaaat i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1244282 29 - 7082604 CCATCCCAAAGCCTGGCT----GTTTTGTAAAT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1327138 29 + 1864846 CCATCCCGAAGCCTGGCT----GTTTCGTAAAT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 131760 29 + 287728 CCATCCCAAAGCCTGGCT----ATTTTGTAAAT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 942575 22 + 5252280 -----------TCTCGCTGCACGTTTTCAAAAT i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1742275 29 + 4416731 ----tcataaccacggctaaatgttttataaat i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90024724 4 - 120129022 I e chlSab2.chr14 1482839 7 - 107702431 I a score=1246169.000000 s hg38.chr2_KI270774v1_alt 138264 126 + 223625 GACTCTtcacttaatccccacaacaacactgaaagctcaacctttccatattaacttacagatgaggaagtgagggctgagggaagtta-atgccaggccctccagccaccacaaat-caa-ggcaggg--- s panTro5.chr2A 1426053 126 + 111504155 GACTCTtcacttaatccccacaacaacactgaaagctcaacctttccatattaacttacagatgaggaagtgagggctgagggaagtta-atgccaggccctccagccaccacaaat-caa-ggcaggg--- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375091 126 + 114371477 GACTCTtcacttaatccccacaacaacactgaaagctcaacctttccatattaacttacagatgaggaagtgagggctgagggaagtta-atgccaggccctccagccaccacaaat-caa-ggcaggg--- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1399662 126 + 1464242 GACTCTtcacttaatccccacaacaacactgaaagctcaacctttccatattaacttacagatgaggaggtgagggctgagggaagtta-atgccaggccctccagccaccacaaat-caa-ggcaggg--- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1122327 126 + 81552678 GACTCTtcacttaatccccacaacaacactgaaagctcaacctttccatattaacttacagatgaggaagtgagggctgagggaagtta-atgccaggccctccagccaccacaaat-caa-ggcaggg--- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1451513 126 + 108979918 GACTCTtcacttaatcctgacaacaaccctgaaagatcaacctttctgtattaacttaaagatgaggaagccggggctgagggaagtta-acgccaggccctccagccaccacaaat-caa-ggcaggg--- i rheMac8.chr13 I 4 C 0 s macFas5.chr13 1423947 126 - 111193037 GACTCTtcacttaatcctgacaacaaccctgaaagatcaacctttctgtattaacttaaagatgaggaagccggggctgagggaagtta-acgccaggccctccagccaccacaaat-caa-ggcaggg--- i macFas5.chr13 I 4 C 0 s macNem1.NW_012011978v1 1451853 126 + 3644372 GACTCTtcacttaatcctgacaacaaccctgaaagatcaacctttctgtattaacttaaagatgaggaagccggggctgagggaagtta-acgccaggccctccagccaccacaaat-caa-ggcaggg--- i macNem1.NW_012011978v1 I 4 C 0 s cerAty1.NW_012000820v1 1406110 126 - 10304083 GACTCTtcacttaatcctgacaacaaccctgaaagatcaacctttctgtattaacttaaagatgaggaagccagggctgagggaagtta-acgccaggccctccagccaccacaaat-caa-ggcaggg--- i cerAty1.NW_012000820v1 I 4 C 0 s chlSab2.chr14 1482846 126 - 107702431 GACTCTtcacttaatcctgacaacaaccctgaaagatcaacctttctgtattaactgaaagatgaggaaaccaggactgagggaagtta-acgccaggccctccagccaccacaaat-caa-ggcaggg--- i chlSab2.chr14 I 7 C 0 s manLeu1.NW_012103754v1 966296 126 - 2200435 GACTCTtcacttaatcctgacaacaaccctgaaagatcaacctttctgtattaacttaaagatgaggaagccggggctgagggaagtta-acgccaggccctccagccaccacaaat-caa-ggcaggg--- i manLeu1.NW_012103754v1 I 4 C 0 s colAng1.NW_012118821v1 1404683 126 - 13651311 GACTCTtcacttaatcctgacaacaaccctgaaagatcaacctttctgtattaacttaaagatgaggaagcgagggctgagggaagtta-aagccaggccctccggccaccacaaac-caa-agcaggg--- i colAng1.NW_012118821v1 I 4 C 0 s calJac3.chr14 1403483 116 - 108792865 gactcttcgcttaacctc-acaacaacccggaaagctcaacgtttccatattaatttacagatgaggaaac-------gagggaagtga-atgccaggccctcaagccaccacaaat-t---ggcaggg--- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1244311 125 - 7082604 GACTCTtcacttaatccc-acaacaaccctgaaagctcaacctttccatattaatttgcagatgaggaaacgagggcggagggaagtta-atgccaggccctcaagccaccacgaat-cag-ggcaggg--- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1327167 125 + 1864846 GACTCTtcacttaatccc-acaacaaccctgaaagctcaacctttccgtattaatttacagatgaggaaatgaggactgagggaagtca-atgccaggccctcaagccaccacaaat-cag-ggcaggg--- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 131789 123 + 287728 GACTCTtctcttaatccc-acaacaaccctgaaagctcaacctttccatattaatttatagatgaggaaacgagggctgagggaagtta-acgccaggccttcaagccgccacaaat-c---agcaggt--- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 942597 80 + 5252280 -GATGCTAATGTAACCTCCACCACAACCC------ATCAC---------------------------AAACTAAGGCTGAGAGCTGATA-ACACCA-------------CCACGAGTGCGT-GTCAGGG--- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1742304 130 + 4416731 gacacctcatttaatttccacttcaaccataaaagatcaacttttctatgtccacgtacagataaggaatataaggctcagagaagttatataacaggccc-caaatcaccactaat-aaatggtataacgg i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90024724 4 - 120129022 I a score=6058497.000000 s hg38.chr2_KI270774v1_alt 138390 513 + 223625 attcaagtccaggggcatctgtcttcaaagcttatgctcctcctgcCCTAACTCCAGGG---CACAGATCTCCTAGGGGC--ACCTGGAGCTCTGTGAACAAGAACCACACCAGGAAGTGCATGATCCCAAAGGGTCATCTTTCTG-CTACCACGGGGTCCTCCTATGTCCTGACCA------------A-TGGTCTCTTCCTACCCAGGTCCGGGAGGTGACAAGACATGTCATTCAAGTTTCAAATGAGGTTGTCACAGATGATGACCGCTATTCTGACCTCCTGATGGCATGGGGACAATACATCGACCACGACATCGCGTTCACACCACAGAGCACCAGCAAAGCTGCCTTCGGGGGAGGGTCTGACTGCCAGATGACTTGTGAGAACCAAAACCCATGTTTTCCCATACAAGTAAGTTTTAGAAAACGTTTCTATGTTTGTTATG---AAAC--TA---AGTGCTATTTAAAACGTCAAACAGAATGGTATAAAACAAAATGTGGAAGTCTGTTTC-TTTGTCCTATTCCCAGGGG s panTro5.chr2A 1426179 513 + 111504155 attcaagtccaggggcatctgtcttcaaagcttatgctccttctgcCCTAACTCCAGGG---CACAGATCTCCTAGGGGC--ACCTGGAGCTCTGTGAACAAGAACCACACCAGGAAGTGCATGATCCCAAAGGGTCATCTTTCTG-CTACCACGGGGTCCTCCTATGTCCTGACCA------------A-TGGTCTCTTCCTACCCAGGTCCGGGAGGTGACAAGACATGTCATTCAAGTTTCAAATGAGGTTGTCACAGATGATGACCGCTATTCTGACCTCCTGATGGCATGGGGACAATACATTGACCACGACATCGCGTTCACACCACAGAGCACCAGCAAAGCTGCCTTCGGGGGAGGGGCTGACTGCCAGATGACTTGTGAGAACCAAAACCCATGTTTTCCCATACAAGTAAGTTTTAGAAAACGTTTCTATGTTTGTTATG---AAAC--TA---AGTGCTATTTAAAACGTCAAACAGAATGGTATAAAACAAAATGTGAAAGTCTGTTTC-TTTGTCCTATTCCCAGGGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375217 513 + 114371477 attcaagtccaggggcatctgtcttcaaagcttatgctcctcctgcCCTAACTCCAGGG---CACAGATCTCCTAGGGGC--ACCTGGAGCTCTGTGAACAAGAACCACACCAGGAAGTGCATGATCCCAAAGGGTCATCTTTCTG-CTACCACGGGGTCCTCCTATGTCCTGACCA------------A-TGGTCTCTTCCTACCCAGGTCCGGGAGGTGACAAGACATGTCATTCAAGTTTCAAATGAGGTTGTCACAGATGATGACCGCTATTCTGACCTCCTGATGGCATGGGGACAATACATTGACCACGACATCGCGTTCACACCACAGAGCACCAGCAAAGCTGCCTTCGGGGGAGGGGCTGACTGCCAGATGACTTGTGAGAACCAAAACCCATGTTTTCCCATACAAGTAAGTTTTAGAAAACGTTTCTATGTTTGTTATG---AAAC--TA---AGTGCTATTTAAAACGTCAAACAGAATGGTATAAAACAAAATGTGAAAGTCTGTTTC-TTTGTCCTATTCCCAGGGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1399788 513 + 1464242 attcgagtccagaggcatctgtcttcaaaactcacattcctcccgcCCTAACTCCAGGG---CACAGATCTCCTAGGGGC--ACCTGGAACTCTGTGAACAAGAACCACACCAGGAAGTGCATGATCCCAAAGGGTCATCTTTCTG-CTACCACGGGGTCCTCCTATGTCCTGACCA------------A-TGGTCTCTTCCTACCCAGGTCCGGGAGGTGACAAGACATGTCATTCAAGTTTCAAATGAGGTTGTCACAGATGATGACCGCTATTCTGACCTCCTGATGGCATGGGGACAATACATCGACCACGACATCGCGTTCACACCACAGAGCACCAGCAAAGCTGCCTTCGGGGGAGGGGCTGACTGCCAGATGACTTGTGAGAACCAAAACCCATGTTTTCCCATACAAGTAAGTTTTAGAAAACGTTTCTATGTTTGTTATG---AAAC--TA---AGTGCTGTTTAAAACGTCAAACAGAATGGTATAAAATAAAATGTGAAAGTCTGTTTCTTTTGTCCTATTCCCA-GGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1122453 514 + 81552678 attcaagtccaggggcatctgtcttcaaagtttacgctcctcctgccgtaACTCCAGGG---CACAGATCTCCTAGGAGC--ACCTGGAGCTCTGTGAACAAGAACCACACCAGGAAGTGCATGATCCCAAAGGGTCATCTTTCTG-CTACCACGGGGTCCTCCTATGTCCTGACCA------------A-TGGTCTCTTCCTACCCAGGTCCGGGAGGTGACAAGACATGTCATTCAAGTTTCAAATGAGGTTGTCACAGATGATGACCGCTATTCTGACCTCCTGATGGCATGGGGACAATACATCGACCACGACATCACGTTCACACCACAGAGCACCAGCAAAGCTGCCTTCGGGGGAGGGGCTGACTGCCAGATGACTTGTGAGAACCAAAACCCATGTTTTCCCATACAAGTAAGttttagaaaacatttttatgtttattatg---aaac--ta---agtgctatttaaaacgtcaaacagaatagtataaaataaaatgtgaaagtctgtttctcttgtcctattcccagggg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1451639 512 + 108979918 gttcgagtccaagggcctctgtcttcaaagctcacgctcctcccgcCCTAACTCCAGGG---CACAGATCTCCTAAGGGC--ACCTGGAGCTCTGTGAACAGGAACCACACCAGGAACTGCATGATCCCAAAG-GTCATCTTTCTT-CTCCCACAGGGT-CTCCTATATCCTGACCA------------A-TGGTCTCTTCCTACCCAGGTCCGGGAGGTGACACGACATGTCATTCAAGTTTCAAATGAGGTTGTCACAGATGATGACCGCTATTCTGACCTCCTGATGGCATGGGGACAATACATCGACCATGACATCGCGTTCACACCGCAGAGCACCAGCAAAGCTGCCTTCAGGGGAGGGGCTGACTGCCAGGTGACTTGTGAGAACCAAAACCCATGTTTTCCCATACAAGTAAGTTTTAGAAAACGTTTTTATGTTTATTATG---AAAC--TA---AGTGCTATTTAAAATGTTAAACAGAACAGTATAAAATAAAATGTGAAAGTCTGTTTCTGTTGTCCTAGTCCCAGGGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1424073 512 - 111193037 gttcgagtccaagggcctctgtcttcaaagctcacgctcctcccgcCCTAACTCCAGGG---CACAGATCTCCTAAGGGC--ACCTGGAGCTCTGTGAACAGGAACCACACCAGGAACTGCATGATCCCAAAG-GTCATCTTTCTT-CTCCCACAGGGT-CTCCTATATCCTGACCA------------A-TGGTCTCTTCCTACCCAGGTCCGGGAGGTGACACGACATGTCATTCAAGTTTCAAATGAGGTTGTCACAGATGATGACCACTATTCTGACCTCCTGATGGCATGGGGACAATACATCGACCATGACATCGCGTTCACACCGCAGAGCACCAGCAAAGCTGCCTTCAGGGGAGGGGCTGACTGCCAGGTGACTTGTGAGAACCAAAACCCATGTTTTCCCATACAAGTAAGTTTTAGAAAACGTTTTTATGTTTATTATG---AAAC--TA---AGTGCTATTTAAAATGTCAAACAGAACAGTATAAAATAAAATGTGAAAGTCTGTTTCTGTTGTCCTAGTCCCAGGGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1451979 507 + 3644372 gttcgagtccaagggcctctgtcttcaaagctcacgctcctcccacCCTAACTCCAGGG---CACAGATCTCCTAAGGGC--ACCTGGAGCTCTGTGAACAGGAACCACACCAGGAACTGCATGATCCCAAAG-GTCATCTTTCTT-CTCCCACAGGGT-CTCCTATATCCTGACCA------------A-TGGTCTCTTCCTACCCAGGTCCGGGAGGTGACACGACATGTCATTCAAGTTTCAAATGAGGTTGTCACAGATGATGACCGCTATTCTGACCTCCTGATGGCATGGGGACAATACATCGACCATGACATCGCGTTCACACCGCAGAGCACCAGCAAAGCTGCCTTCAGGGGAGGGGCTGACTGCCAGGTGACTTGTGAGAACCAAAACCCATGTTTTCCCATACAAGTAAGTTTTAGAAAACGTTTTTATGTTTATTATG---AAAC--TA---AGTGCTATTTAAAATGTCAAACAGAACAGT-----ATAAAATGTGAAAGTCTGTTTCTGTTGTCCTAGTCCCAGGGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1406236 509 - 10304083 gttcgagtccaagggcctctgtcttcaaagctcacgctcctcccgcCCTAACTCCAGGG---CACAGATCTCCTAGGGGC--ACCTGGAGCTCTGTGAACAGGAACCACACCAGGAACTGCATGATCCCAAAG-GTCATCTTTCTT-CTCCCACGGGGT-CTCCTATGTCCTGACCA------------A-TGGTCTCTTCCTACCCAGGTCCGGGAGGTGACACGACATGTCATTCAAGTTTCAAATGAGGTTGTCACAGATGATGACCGCTATTCTGACCTCCTGATGGCATGGGGACAATACATCGACCATGACATCGCGTTCACACCGCAGAGCACCAGCAAAGCTGCCTTCGGGGGAGGGGCTGACTGCCAGGTGACTTGTGAGAACCAAAACCCATGTTTTCCCATACAAGTAAGTTTTAGAAAACGTTTTTATGTTTATTATG---AAAC--TA---AGTGCTATTTAAAATGTCAAACAGAACAGTATAAAATAAAATGTGAAAGTCTGTTTCTGTT---CTAGTCCCAGGGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1482972 512 - 107702431 attcgagtccaagggcgtctgtcttcaaagctcatgctcctcccgcCCTAGCTCCAGGG---CACAGATCTCCTAGGGGC--ACCTGGAGCTCTGTGAACAGGAACCACACCAGGAACTGCATGGTCCCAAAG-GTTGTCTTTCTT-CTCCTACGGGGT-CTCCTATGTCCTGACCA------------A-TGGTCTCTTCCTTCCCAGGTCCGGGAGGTGACACGACATGTCATTCAAGTTTCAAATGAGGTTGTCACAGATGATGACCGCTATTCTGACCTCCTGATGGCATGGGGACAATACATCGACCATGACATCGCGTTCACACCGCAGAGCACCAGCAAAGCTGCCTTCGGGGGAGGGGCTGACTGCCAGGTGACTTGTGAGAACCAAAACCCATGTTTTCCCATACAAGTAAGTTTTAGAAAACGTTTTTATGTTTATTATG---AAAC--TA---AGTGCTATTTAAAATGTCAAACAGAACAGTATAAAATAAAATGTGAAAGTCTGTTTCTATTGTCCTAGTCCCAGGGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 966422 512 - 2200435 gttcgagtccaagggcctctgtcttcaaagctcacgctcctcccgcCCTAACTCCAGGG---CACAGATCTCCTAGGGGC--ACCTGGAGCTCTGTGAACAGGAACCACACCAGGAACTGCATGATCCCAAAG-GTCATCTTTCTT-CTCCCACGGGGT-CTCCTATGTCCTGACCA------------A-TGGTCTCTTCCTACCCAGGTCCGGGAGGTGACACGACATGTCATTCAAGTTTCAAATGAGGTTGTCACAGATGATGACCGCTATTCTGACCTCCTGATGGCATGGGGACAATACATCGACCATGACATCGCGTTCACACCGCAGAGCACCAGCAAAGCTGCCTTCGGGGGAGGGGCTGACTGCCAGGTGACTTGTGAGAACCAAAACCCATGTTTTCCCATACAAGTAAGTTTTAGAAAACGTTTTTATGTTTATTATG---AAAC--TA---AGTGCTATTTAAAATGTCAAACAGAACAGTATAAAATAAAATGTGAAAGTCTGTTTCTGTTGTCCTAGTCCCAGGGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1404809 512 - 13651311 attcgagtccaaggccttctgtcttcaaagctcacgctcctcccgcCCTAGCTCCAGGG---CACAGATCTCCTAGCGGC--ACCTGGAGCTCTGTGAACAGGAGCCACACTAGGAACTACATGATCCCAAAGCGCCATCTTTCTT-CTCC-ATGGGGT-CTCCTATGGCCTGACCA------------A-TGGTCTCTTCCTACCCAGGTCCGGGAGGTGACACGACATGTCATTCAAGTTTCAAATGAGGTTGTCACAGATGATGACCGCTATTCTGACCTCCTGATGGCATGGGGACAATACATCGACCATGACATCGCGTTCACACCGCAGAGCACCAGCAAAGCTGCCTTTGCGGGAGGGGCTGACTGCCAGGTGACTTGTGAGAACCAAAACCCGTGTTTTCCCATACAAGTAAGTTTTAGGAAACGTTGTTATGTTTATTATG---AAAC--TA---AGTGCTATTTAAAATGTCAAACAGAACAGTACAAAATAAAATGTGAATGTCTGTTTCTGTTGTCCTAGTCCCAGGGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1403599 513 - 108792865 attcgagcccaggggcatctgtcttcaaagttcatgctcctcccgcCCTCACTCCAGAG---CACAGCTCTCCTAGGAGC--ACCTGCAGTTCTGTGGACAAGAAACACACCAGAAAGCGCATGATCCCAAAGGGTCATCTTTCTG-CTACAGTGGGGCCCTCCTAGGTCCTGACCC------------A-TGCTCTCTTCCCACCCAGGTCCGGGAGGTGACAAGACAGGTCATTCAAGTTTCAAACGAGGTTGTCACAGACGATGACCACTATTCCGACCTCCTGATAGCATGGGGACAATATATCGACCATGACATTGCATTCACACCGCAGAGCACCAGCAAGGCTGCCTTCGAGGGAGGGGCTGACTGCCAGGTGACTTGTGAGAACCAAAACCCATGTTTCCCCATACAGGTAAGTTTTAGAAAACGTTTTTACATTTATCACA---AAAC--TA---AGTGCTATTTAAAATGTCA-ACAGAATAGTATAAAATAAAACGTGAAAGTCTGTTTCTTTTGTCCTATTCCCTGGGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1244436 514 - 7082604 attcgagcccaggggcgtctgtcttcagaattcatgctcCCCCTGCCCTAACTCCAGAG---CACAGCTCTCCTAGGAGC--ACCTGCACTTCTGTGGACAAGAACCACACCAGGAAGCGCGTGATCCCAAAGGGTCATCTTTCTG-CTACAGCGGGGCCCTCCTCTGTCCTGACCC------------A-TGGTCTCCTCCCACCCAGGTCCGGGAGGTGACAAGACAGGTCATTCAAGTTTCAAACGAGGTTGTCACAGACGATGACCACTATTCCGACCTCCTGATAGCATGGGGACAATACATCGACCATGACATCGCGTTCACACCGCAGAGCACCAGCAAGGCTGCCTTTGCGGGAGGGGCTGACTGCCAGGTGACCTGTGAGAACCAAAACCCATGCTTCCCCATACAGGTAAGTTTTAGAAAACGTTTTTACATTTATTATG---AAAC--TA---AACGCTATTTAAAATGTCAGACAGAGTAGTATAAAATAAAACGTGGAAGTCTGTTTCTTTCGTCCTATACCCTGGGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1327292 513 + 1864846 attcgagccca-gggtgtctgtattcaaagttcatgcccCACCTGCCCTAACTCCAGAG---TACAGCTCTCCTAGGAGC--ACCTGCAGTTCTGTGGACAAGAACCACACCAGGAAGCACGTGATCCCAAAGGGTCATCTTTCTG-CTACAGTAGGGCCCTCCTAGGTCCTGACCC------------A-TGGCCTCTTCCCATGCAGGTCCGGGAGGTGACACGACAGGTCATTCAAGTTTCAAACGAGGTTGTCACAGACGATGACCACTATTCCGACCTCCTGATAGCATGGGGACAATATATCGACCATGACATCGCGTTCACACCGCAGAGCACCAGCAAGGCTGCCTTCGCAGGAGGGGCTGACTGCCAGGTGACCTGTGAGAACCAAAACCCATGTTTCCCCATACAGGTAAGTTTTAGAAAACGTTTTTACATTTCTTATG---AAAC--TA---AGTGCTATTTAAAATGTCAAACAGAATAGTATAAAATAAAACATGAAAGTCTGTTTCTTTTGTCCTATTCCCTGGGG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 131912 514 + 287728 attcgagcccagtggcgtctgtcttcaaagttcatgctcctcctgcCCTAACTCCAGAG---CACAGCTCTCCTAGGAGC--ACCTGCAGTTCTGTGGACAAGAACCACACCAGGAAGCGCATGATCCCAAAGGGTCATCTTTCTG-CTACAGTGGGGCCCTCCTAGGTCCTGACCC------------A-TGGTCTCTTCCCACCCAGGTCCGGGAGGTGACAAGACAGGTCATTCAAGTTTCAAACGAGGTTGTCACAGATGATGACCACTATTCTGACCTCCTAATAGCATGGGGACAATATATCGACCATGACATCGCGTTCACACCGCAGAGCACCAGCAAGGCTGCCTTCGCAGGAGGGGCTGACTGCCAGGTGACTTGTGAGAACCAAAACCCATGTTTCCCCATACAGGTAAGTTTTAGAAAAGGTTTTTACATTTATTATG---AAAC--TA---AGTGCTATTTAAAATGTGAAACAGAATAGTATAAAATAAAACGTGAAAGTCTGTTTCTTTTGTCCTATTCCCTGGGG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 942677 505 + 5252280 GCCCGAGGCCAGGAGTGTCTCCCTCC--AGCTCAGGGAAGGC--ACCACAGTTCTGTGACACCACAGAACTCTCCTGGGC--ACC-ACAGTTCTGTG-ACAAGACCCACACTGGGCCATGAGCAACCCTACACAGCCA-CATCCTG-CTGAGATGTGCC-TCCCTGTGTCATGACAA------------A-TGACCTCTTCTCACCCAGGTACGAGAGGTGACACGAGAGGTCATTCAAGTTTCCAATGAAGCTGTCACAGAAGATGACCAGTACTCCGACCTCCTGACAGTGTGGGGACAGTACATTGCCCACGACCTGGCCCTCACACCCCAGAGCACCAGCAGAGCTGCATTTGGGGGCGGAGCTGATTGCCTACTGACCTGTGAGAACCGAAGCCCGTGTTTTCCTATTCAGGTAGAGTCT-GTTAACATCTTTATTTTTATTATGGAAGAAA--TG---AATGACTTTTAAAAGACCAGTCAGGGAAGCATAGACTAAAATACCAAAGTC---TCCTTTTGTCCTTCTC---GGGT i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90024728 501 - 120129022 ATTCAAGCCCAAATGTGTCAGTCTTCCATCTT--GGCTCTTCCCGTTATGGCCACAGCA----ACAGGTCTTTCCAGGGC---TCTTCAGAGCCGTGAACAAGAGCCTCACCATGAATT-TAAGACCTCAAGG---TCTCCATTAT-TGATCACGGGGC--------AGTCTAACCACACCACTGCAAGC-TGTTCTCTT--TACCCAGGTACGGGAAGTGACAAGGCACCTCATTCAAGTTTCCAATGAGGCTGTGACCGAAGATGACCAGTACTCTGATTTTCTGCCGGTGTGGGGACAGTACATCGATCATGACATTGCTCTCACACCACAGAGCACTAGCACAGCAGCCTTCTGGGGAGGTGTCGACTGCCAGCTGACCTGTGAGAACCAAAATCCTTGCTTCCCCATACAGGTAATTTCCCTCAA--GTCTTTA--TTGATTATG---AAATGACA---TGTGACTTTTCAAACACTAAACAGAAAAGCTTAACAT-AAATGC-AAAGTC---TCCTTTGCCCCCATCCCCAGGAG i mm10.chr12 I 4 I 193 s dasNov3.JH576208 1742434 511 + 4416731 attcaaagcccaaagtatcaatcttcaaaatatatgctctttccactataactataGGG---AATAGAGCT---ATGAACTTGCCAACAGTTCTGCAAATAAGAACTACACCATGAAATTTATTATTCCAAGGTGGCGTATTTCTGCCTAAAATATGGCCTTCCTATATCATGACAA------------ACTGCTTTTCTCTTACCCAGGTACGGGAGGTGACAAGACAAGTGATTCAAGTTTCCAACGAGGCTGTTACAGAGGATGACCAATATTCTGATCTCCTGATGGTGTGGGGACAATATATTGATCATGACATTGCATTCACACCTCAGAGTACCAGCAAAGCTGCATTTTGGGGAGGAATTGACTGCCAGCTGACCTGTGAGAACCAAAACCCTTGTTTTCCCATACAGGTAGAATTTTTTAAAC-------TCCTTATTTTG---AAGC--TAATTAATGTCATTCAAAAAAGCAAACCGTAAAGTATACGATGGAAAGTTAACGCCCCCTTATTTTGTCCGGTtcccagggg i dasNov3.JH576208 C 0 I 1 a score=463862.000000 s hg38.chr2_KI270774v1_alt 138903 52 + 223625 TAGCAG----TTGT-------GAATATCTGGTGCATCTCACTGGAAATTCCCTGGGTACACGT s panTro5.chr2A 1426692 52 + 111504155 TAGCAG----TTGT-------GAATATCTGGTGCATCTCACTGGAAATTCCCTGGGTACACAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375730 52 + 114371477 TAGCAG----TTGT-------GAATATCTGGTGCATCTCACTGGAAATTCCCTGGGTACACGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400301 52 + 1464242 TAGCAG----TTGT-------GAATATCTGGTGCATCTCACTGGAAATTACCTGGGTACACAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1122967 52 + 81552678 tggcag----ttgt-------gaatatctggtgcatctcactggaaattatctgggtacacat i nomLeu3.chr19 C 0 I 21 s rheMac8.chr13 1452151 52 + 108979918 TAACAG----TTGT-------GAATATCCCAAGCATCTCACTGGAAATTATCTGGATACACAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1424585 52 - 111193037 TAACAG----TTGT-------GAATATCCCAAGCATCTCACTGGAAATTATCTGGATACACAT i macFas5.chr13 C 0 T 11 s macNem1.NW_012011978v1 1452486 52 + 3644372 TAACAG----TTGT-------GAATATCCCAAGCATCTCACTGGAAATTATCTGGATACACAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1406745 52 - 10304083 TAACAG----TTGT-------GAATATCCCGTGCATCGCACTGGAAATTATCTGGATACACAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1483484 52 - 107702431 TAACAG----TTGT-------GAATATCCCGTGCATCTCACTGGAAATTATCTGGATACACAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 966934 52 - 2200435 TAACAG----TTGT-------GAATATCCCAAGCATCTCACTGGAAATTATCTGGATACACAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405321 52 - 13651311 TAACAG----TTGT-------GAATATCCCGTGCATCTCACTGGAAATTATCTGGATACACAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404112 51 - 108792865 TAACAG-----TGT-------GAATGTCCTGTGAATCCCACTGGAAATTATCTGAGCACACAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1244950 51 - 7082604 TAACAG-----TGT-------GAATGTCTTGTGAATCCCACTGGAAATTATCTGAGCACACAT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1327805 51 + 1864846 TAACAG-----TGT-------GAATGTCCTGTGAATCCCACTGGAAATTATCTGAGCACACAT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 132426 51 + 287728 TAACAG-----TGT-------GAATGTCCTGTGAATCCCACTGGAAATTATCTGAGCACACAT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 943182 41 + 5252280 TAACAGCTTGCTGT-------GAATTTC------------CTAGAGGTCATCTGT---CACAT i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1742946 57 + 4416731 caacag----ctcttatgatagattttcctacgggtcccatcagaaatcttctatgcatgt-- i dasNov3.JH576208 I 1 C 0 e mm10.chr12 90025229 193 - 120129022 I a score=14976.000000 s hg38.chr2_KI270774v1_alt 138955 2 + 223625 AT s panTro5.chr2A 1426744 2 + 111504155 AT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375782 2 + 114371477 AT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400353 2 + 1464242 AT i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1452203 2 + 108979918 AT i rheMac8.chr13 C 0 C 0 s macNem1.NW_012011978v1 1452538 2 + 3644372 AT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1406797 2 - 10304083 AT i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 966986 2 - 2200435 AT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1404163 2 - 108792865 AT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1245001 2 - 7082604 AT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1327856 2 + 1864846 AT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 132477 2 + 287728 AT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 943223 2 + 5252280 GT i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1743003 2 + 4416731 at i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e chlSab2.chr14 1483536 0 - 107702431 C e macFas5.chr13 1424637 11 - 111193037 T e nomLeu3.chr19 1123019 21 + 81552678 I a score=12598.000000 s hg38.chr2_KI270774v1_alt 138957 4 + 223625 ATAT s panTro5.chr2A 1426746 4 + 111504155 ATAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375784 4 + 114371477 ATAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400355 4 + 1464242 ATAT i gorGor5.CYUI01015607v1 C 0 C 0 s manLeu1.NW_012103754v1 966988 4 - 2200435 ATAT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1404165 4 - 108792865 ATGT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1245003 4 - 7082604 AGAT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1327858 4 + 1864846 ATAT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 132479 4 + 287728 ATAT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 943225 4 + 5252280 GCAT i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1743005 4 + 4416731 gcat i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e macFas5.chr13 1424637 11 - 111193037 T e rheMac8.chr13 1452205 0 + 108979918 C e nomLeu3.chr19 1123019 21 + 81552678 I a score=242.000000 s hg38.chr2_KI270774v1_alt 138961 2 + 223625 AG s panTro5.chr2A 1426750 2 + 111504155 AG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375788 2 + 114371477 AG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400359 2 + 1464242 AG i gorGor5.CYUI01015607v1 C 0 C 0 s manLeu1.NW_012103754v1 966992 2 - 2200435 AG i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1245007 2 - 7082604 GG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1327862 2 + 1864846 GG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 132483 2 + 287728 GG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 943229 2 + 5252280 AA i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1743009 1 + 4416731 a- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e calJac3.chr14 1404169 0 - 108792865 C e colAng1.NW_012118821v1 1405373 0 - 13651311 C e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e macFas5.chr13 1424637 11 - 111193037 T e rheMac8.chr13 1452205 0 + 108979918 C e nomLeu3.chr19 1123019 21 + 81552678 I a score=20355.000000 s hg38.chr2_KI270774v1_alt 138963 7 + 223625 CATGTAT s panTro5.chr2A 1426752 7 + 111504155 CATGTAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375790 7 + 114371477 CATGTAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400361 7 + 1464242 CATGTAT i gorGor5.CYUI01015607v1 C 0 C 0 s manLeu1.NW_012103754v1 966994 7 - 2200435 CATATAA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1404169 7 - 108792865 CATTTAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1245009 7 - 7082604 CATTTAT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1327864 7 + 1864846 CATTTAT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 132485 7 + 287728 CATATAC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 943231 7 + 5252280 TGTGTAC i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1743010 7 + 4416731 tatgtgt i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e macFas5.chr13 1424637 11 - 111193037 T e rheMac8.chr13 1452205 0 + 108979918 C e nomLeu3.chr19 1123019 21 + 81552678 I a score=3600.000000 s hg38.chr2_KI270774v1_alt 138970 1 + 223625 G s panTro5.chr2A 1426759 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375797 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400368 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s manLeu1.NW_012103754v1 967001 1 - 2200435 G i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1404176 1 - 108792865 G i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1327871 1 + 1864846 G i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 132492 1 + 287728 G i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1743017 1 + 4416731 g i dasNov3.JH576208 C 0 I 876 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e otoGar3.GL873658 943238 0 + 5252280 C e colAng1.NW_012118821v1 1405373 0 - 13651311 C e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e macFas5.chr13 1424637 11 - 111193037 T e rheMac8.chr13 1452205 0 + 108979918 C e nomLeu3.chr19 1123019 21 + 81552678 I a score=5412.000000 s hg38.chr2_KI270774v1_alt 138971 3 + 223625 ATA- s panTro5.chr2A 1426760 3 + 111504155 ATA- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375798 3 + 114371477 ATA- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400369 3 + 1464242 ATA- i gorGor5.CYUI01015607v1 C 0 T 30 s manLeu1.NW_012103754v1 967002 3 - 2200435 ATA- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1404177 3 - 108792865 ATA- i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1327872 3 + 1864846 ATA- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 132493 3 + 287728 GTA- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 943238 4 + 5252280 ATAT i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e macFas5.chr13 1424637 11 - 111193037 T e rheMac8.chr13 1452205 0 + 108979918 C e nomLeu3.chr19 1123019 21 + 81552678 I a score=6837.000000 s hg38.chr2_KI270774v1_alt 138974 4 + 223625 GTGT s panTro5.chr2A 1426763 4 + 111504155 GTGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375801 4 + 114371477 GTGT i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1123040 4 + 81552678 gtgt i nomLeu3.chr19 I 21 C 0 s manLeu1.NW_012103754v1 967005 4 - 2200435 GCGT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1404180 3 - 108792865 GTG- i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1327875 4 + 1864846 GTGT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 132496 4 + 287728 GTGT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 943242 4 + 5252280 GCAT i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e macFas5.chr13 1424637 11 - 111193037 T e rheMac8.chr13 1452205 0 + 108979918 C e gorGor5.CYUI01015607v1 1400372 30 + 1464242 T a score=2100.000000 s hg38.chr2_KI270774v1_alt 138978 1 + 223625 G s panTro5.chr2A 1426767 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375805 1 + 114371477 G i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1123044 1 + 81552678 g i nomLeu3.chr19 C 0 C 0 s manLeu1.NW_012103754v1 967009 1 - 2200435 G i manLeu1.NW_012103754v1 C 0 I 81 s aotNan1.NW_018513311v1 132500 1 + 287728 G i aotNan1.NW_018513311v1 C 0 I 51 s otoGar3.GL873658 943246 1 + 5252280 G i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e dasNov3.JH576208 1743018 876 + 4416731 I e calJac3.chr14 1404183 0 - 108792865 C e colAng1.NW_012118821v1 1405373 0 - 13651311 C e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e macFas5.chr13 1424637 11 - 111193037 T e rheMac8.chr13 1452205 0 + 108979918 C e gorGor5.CYUI01015607v1 1400372 30 + 1464242 T a score=7784.000000 s hg38.chr2_KI270774v1_alt 138979 16 + 223625 -------------GGTACACATATATATA s panTro5.chr2A 1426768 16 + 111504155 -------------GGTACACATATATATA i panTro5.chr2A C 0 I 2 s panPan2.chr2A 1375806 16 + 114371477 -------------GGTACACATATATATA i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1123045 16 + 81552678 -------------ggcagatgtgtatata i nomLeu3.chr19 C 0 C 0 s otoGar3.GL873658 943247 29 + 5252280 TGCAGTGCTTCTCTTTACACATATGTGTA i otoGar3.GL873658 C 0 I 9 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e dasNov3.JH576208 1743018 876 + 4416731 I e calJac3.chr14 1404183 0 - 108792865 C e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e macFas5.chr13 1424637 11 - 111193037 T e rheMac8.chr13 1452205 0 + 108979918 C e gorGor5.CYUI01015607v1 1400372 30 + 1464242 T a score=3412.000000 s hg38.chr2_KI270774v1_alt 138995 15 + 223625 GCATGTATGATACTG s panPan2.chr2A 1375822 15 + 114371477 GCATGTATGATACTG i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1123061 15 + 81552678 gCATGTATGATAGTG i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1404183 2 - 108792865 -------------TG i calJac3.chr14 C 0 C 0 s otoGar3.GL873658 943285 15 + 5252280 GCACATGCTTTACTT i otoGar3.GL873658 I 9 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e macFas5.chr13 1424637 11 - 111193037 T e rheMac8.chr13 1452205 0 + 108979918 C e gorGor5.CYUI01015607v1 1400372 30 + 1464242 T e panTro5.chr2A 1426784 2 + 111504155 I a score=14409.000000 s hg38.chr2_KI270774v1_alt 139010 18 + 223625 TGGGTACAC-ATATATATA s panPan2.chr2A 1375837 18 + 114371477 TGGGTACAC-ATATATATA i panPan2.chr2A C 0 T 66 s gorGor5.CYUI01015607v1 1400342 18 + 1464242 TGGGTACAC-ATATATATA i gorGor5.CYUI01015607v1 T 30 C 0 s nomLeu3.chr19 1123076 18 + 81552678 TGTAGTCAT-GTGTATATA i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1424626 18 - 111193037 TGGATACAC-ATATATATA i macFas5.chr13 T 11 C 0 s calJac3.chr14 1404185 18 - 108792865 TGGGCAGAT-GTGTATACA i calJac3.chr14 C 0 C 0 s otoGar3.GL873658 943300 18 + 5252280 TACATGCACTATGTGTAT- i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e rheMac8.chr13 1452205 0 + 108979918 C e panTro5.chr2A 1426784 2 + 111504155 I a score=2252.000000 s hg38.chr2_KI270774v1_alt 139028 2 + 223625 GT s panPan2.chr2A 1375789 2 + 114371477 GC i panPan2.chr2A T 66 C 0 s gorGor5.CYUI01015607v1 1400360 2 + 1464242 GC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123094 2 + 81552678 GC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1424644 2 - 111193037 GC i macFas5.chr13 C 0 C 0 s calJac3.chr14 1404203 2 - 108792865 GC i calJac3.chr14 C 0 C 0 s otoGar3.GL873658 943318 2 + 5252280 GA i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e rheMac8.chr13 1452205 0 + 108979918 C e panTro5.chr2A 1426784 2 + 111504155 I a score=58786.000000 s hg38.chr2_KI270774v1_alt 139030 48 + 223625 ATGTATGATAGTGTGTGGGCAGATGTGTACATAGCATGTATGATACTG s panTro5.chr2A 1426786 48 + 111504155 ATGTATGATCGTGTGTGGGCAGATGTGTACATAGCATGTATGATACTG i panTro5.chr2A I 2 C 0 s panPan2.chr2A 1375791 46 + 114371477 ATGTATGATA--GTGTGGGTACACATATATATAGCATGTATGATACTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400362 48 + 1464242 ATGTATGATAGCGTGTGGGCAGATGTGTACATAGCATGTATGATACTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123096 45 + 81552678 GTATAGGATTATGTGTGGGCACATGTAT---TAGCATATATGATCTTG i nomLeu3.chr19 C 0 T 133 s macFas5.chr13 1424646 48 - 111193037 ATATAAGATAGCGTGTGGGCAGATGTGTATATGGCATATATGATAGTG i macFas5.chr13 C 0 T 68 s calJac3.chr14 1404205 48 - 108792865 ATATATGGCATTGTGTGGGCACGTGTGTACATAGCATATAACATAGTA i calJac3.chr14 C 0 I 2 s otoGar3.GL873658 943320 47 + 5252280 GCATATGCTTTTCTGTACACGTGTGTGCACAT-GCTTCTCTGTACCTG i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e rheMac8.chr13 1452205 0 + 108979918 C a score=101103.000000 s hg38.chr2_KI270774v1_alt 139078 68 + 223625 TGGGTACATATATATATA-------------GCATGCATGTTAGTGTGTGGGCAGATG-TGTACATAGCATGTATGATA--CTG- s panTro5.chr2A 1426834 68 + 111504155 TGGGTACACATATATATA-------------GCATGTATGATAGTGTGTGGGCAGATG-TGTACATAGCATGTATGATA--CTG- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375837 68 + 114371477 TGGGTACACATATATATA-------------GCATGTATGATCGTGTGTGGGCAGATG-TGTACATAGCATGTATGATA--CTG- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400410 68 + 1464242 TGGGCACATGCATATATA-------------GCATATATGATAGTGTGTGGGCAGATG-TGTACATAGCATGTATGATT--CTG- i gorGor5.CYUI01015607v1 C 0 T 136 s nomLeu3.chr19 1123008 68 + 81552678 tgggtacacatatatata-------------gcatatatgatagtgtgtgggcagatg-tgtatatagCATGTATGATA--GTG- i nomLeu3.chr19 T 133 T 68 s macFas5.chr13 1424626 68 - 111193037 TGGATACACATATATATA-------------GCATATAAGATAGCGTGTGGGCAGATG-TGTATATGGCATATATGATA--GTG- i macFas5.chr13 T 68 T 68 s calJac3.chr14 1404255 68 - 108792865 TGGGCACATGTGTATATG-------------ACAT--ATGGTAGTGTATGGGCACGTG-TGTATATGGCACATATGACAGCCTG- i calJac3.chr14 I 2 C 0 s otoGar3.GL873658 943367 81 + 5252280 TGTACACATGTGTATGTACACGCTTTTTGTTACATGTTTATGAGCGTGT--GCACATGCTTTACTTTGCATGTGTGCAC--GTTT i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e rheMac8.chr13 1452205 0 + 108979918 C a score=29632.000000 s hg38.chr2_KI270774v1_alt 139146 19 + 223625 ----TGGGTACACATATATATAG s panTro5.chr2A 1426902 19 + 111504155 ----TGGGCACACATATATATAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375905 19 + 114371477 ----TGGGTACACATATATATAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400342 19 + 1464242 ----TGGGTACACATATATATAG i gorGor5.CYUI01015607v1 T 136 C 0 s nomLeu3.chr19 1123008 19 + 81552678 ----tgggtacacatatatatag i nomLeu3.chr19 T 68 C 0 s macFas5.chr13 1424626 19 - 111193037 ----TGGATACACATATATATAG i macFas5.chr13 T 68 C 0 s calJac3.chr14 1404323 19 - 108792865 ----TGGGCACATGTGTCTACAG i calJac3.chr14 C 0 T 173 s otoGar3.GL873658 943448 20 + 5252280 TACATGCACACTCGTGTGTG--- i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e rheMac8.chr13 1452205 0 + 108979918 C a score=83040.000000 s hg38.chr2_KI270774v1_alt 139165 51 + 223625 CATGTATGATAGTGTGTGGGCAGATGTGTACA---------------TAGCATGTATGATACTGTG s panTro5.chr2A 1426921 51 + 111504155 CATGTATGATAGTGTGTGGGCAGATGTGTACA---------------TAGCATGTATGATACTGTG i panTro5.chr2A C 0 T 68 s panPan2.chr2A 1375924 51 + 114371477 CATGTATGATAGTGTGTGGGCAGATGTGTACA---------------TAGCATGTATGATACTGTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400361 51 + 1464242 CATGTATGATAGCGTGTGGGCAGATGTGTACA---------------TAGCATGTATGATACTGTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123027 51 + 81552678 catatatgatagtgtgtgggcagatgtgtata---------------tagCATGTATGATAGTGTG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1424645 51 - 111193037 CATATAAGATAGCGTGTGGGCAGATGTGTATA---------------TGGCATATATGATAGTGTG i macFas5.chr13 C 0 C 0 s calJac3.chr14 1404169 47 - 108792865 CATTTATGATAGTGTGTGGGCAGATGTGTATA---------------CAGCATATATGGCAT---- i calJac3.chr14 T 173 C 0 s otoGar3.GL873658 943468 58 + 5252280 CATATCCTTTCGTCTGTGTGTATGTATGTGCATTGCACATGCTTGTCTAACatgtatg-------- i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e rheMac8.chr13 1452205 0 + 108979918 C a score=42575.000000 s hg38.chr2_KI270774v1_alt 139216 46 + 223625 GGTACACATATATGTAGCATGTATGATAGTGTGTGGGCAGATGTGT s panTro5.chr2A 1426904 46 + 111504155 GGCACACATATATATAGCATGTATGATAGTGTGTGGGCAGATGTGT i panTro5.chr2A T 68 C 0 s panPan2.chr2A 1375975 46 + 114371477 GGCACACATATATATAGCATGTATGATAGTGTGTGGGCAGATGTGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400412 46 + 1464242 GGCACATGCATATATAGCATATATGATAGTGTGTGGGCAGATGTGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123078 46 + 81552678 TAGTCATGTGTATATAGCGTATAGGATTATGTGTGGGCACATGTAT i nomLeu3.chr19 C 0 I 32 s macFas5.chr13 1424696 46 - 111193037 TGGTCACGTGTATATAGCGTATAGGATTACGTGTGGGCACGTGTAT i macFas5.chr13 C 0 I 32 s calJac3.chr14 1404216 17 - 108792865 -----------------------------TGTGTGGGCACGTGTGT i calJac3.chr14 C 0 C 0 s otoGar3.GL873658 943526 31 + 5252280 tgtacacacatatgt-gcatacattcttcttt-------------- i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e rheMac8.chr13 1452205 0 + 108979918 C a score=29662.000000 s hg38.chr2_KI270774v1_alt 139262 17 + 223625 ACATAGCATGTATGATA s panTro5.chr2A 1426950 17 + 111504155 ACATAGCATGTATGATA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376021 17 + 114371477 ACATAGCATGTATGATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400458 17 + 1464242 ACATAGCATGTATGATT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123156 17 + 81552678 ATATAGCATGTATGATA i nomLeu3.chr19 I 32 C 0 s macFas5.chr13 1424774 17 - 111193037 ACATAGCATATATGATA i macFas5.chr13 I 32 C 0 s calJac3.chr14 1404233 17 - 108792865 ACATAGCATATAACATA i calJac3.chr14 C 0 I 100 s otoGar3.GL873658 943557 17 + 5252280 acatctactgtgtcata i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e rheMac8.chr13 1452205 0 + 108979918 C a score=3912.000000 s hg38.chr2_KI270774v1_alt 139279 5 + 223625 CTGTG s panTro5.chr2A 1426967 5 + 111504155 CTGTG i panTro5.chr2A C 0 T 101 s panPan2.chr2A 1376038 5 + 114371477 CTGTG i panPan2.chr2A C 0 T 261 s gorGor5.CYUI01015607v1 1400475 5 + 1464242 CTGTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123173 5 + 81552678 GTATG i nomLeu3.chr19 C 0 I 2 s otoGar3.GL873658 943574 5 + 5252280 tggtg i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e dasNov3.JH576208 1743018 876 + 4416731 I e calJac3.chr14 1404250 100 - 108792865 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e macFas5.chr13 1424791 0 - 111193037 C e rheMac8.chr13 1452205 0 + 108979918 C a score=2064.000000 s hg38.chr2_KI270774v1_alt 139284 6 + 223625 GGTACA s gorGor5.CYUI01015607v1 1400480 6 + 1464242 GGCACA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123180 6 + 81552678 GTCACA i nomLeu3.chr19 I 2 C 0 s otoGar3.GL873658 943579 6 + 5252280 agcaca i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e dasNov3.JH576208 1743018 876 + 4416731 I e calJac3.chr14 1404250 100 - 108792865 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e macFas5.chr13 1424791 0 - 111193037 C e rheMac8.chr13 1452205 0 + 108979918 C e panPan2.chr2A 1376043 261 + 114371477 T e panTro5.chr2A 1426972 101 + 111504155 T a score=-789.000000 s hg38.chr2_KI270774v1_alt 139290 1 + 223625 --C s gorGor5.CYUI01015607v1 1400486 3 + 1464242 TGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123186 1 + 81552678 T-- i nomLeu3.chr19 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e calJac3.chr14 1404250 100 - 108792865 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e macFas5.chr13 1424791 0 - 111193037 C e rheMac8.chr13 1452205 0 + 108979918 C e panPan2.chr2A 1376043 261 + 114371477 T e panTro5.chr2A 1426972 101 + 111504155 T a score=6686.000000 s hg38.chr2_KI270774v1_alt 139291 20 + 223625 ATATATAGCATGTATGATAG s panPan2.chr2A 1375782 20 + 114371477 ATATATAGCATGTATGATAG i panPan2.chr2A T 261 C 0 s gorGor5.CYUI01015607v1 1400489 20 + 1464242 ATATATAGCATGTATGATAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123187 20 + 81552678 CTATATAGCGTATAGGATTA i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1424791 7 - 111193037 -------GCGTGTG------ i macFas5.chr13 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e calJac3.chr14 1404250 100 - 108792865 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e rheMac8.chr13 1452205 0 + 108979918 C e panTro5.chr2A 1426972 101 + 111504155 T a score=3820.000000 s hg38.chr2_KI270774v1_alt 139311 4 + 223625 TGTG s panPan2.chr2A 1375802 4 + 114371477 TGTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400509 4 + 1464242 TGTG i gorGor5.CYUI01015607v1 C 0 I 2 s nomLeu3.chr19 1123207 4 + 81552678 TGTG i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1404350 4 - 108792865 TGTG i calJac3.chr14 I 100 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e macFas5.chr13 1424798 0 - 111193037 C e rheMac8.chr13 1452205 0 + 108979918 C e panTro5.chr2A 1426972 101 + 111504155 T a score=26511.000000 s hg38.chr2_KI270774v1_alt 139315 39 + 223625 GGCAGATGTGTACATAGCATGTATGATAC--TGTGGGTACA s panTro5.chr2A 1426871 39 + 111504155 GGCAGATGTGTACATAGCATGTATGATAC--TGTGGGCACA i panTro5.chr2A T 101 C 0 s panPan2.chr2A 1375806 39 + 114371477 GGTACACATATATATAGCATGTATGATAC--TGTGGGTACA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400515 39 + 1464242 GGCAGATGTGTACATAGCATATATGATAC--TGTGGGCACA i gorGor5.CYUI01015607v1 I 2 T 68 s nomLeu3.chr19 1123211 8 + 81552678 ---------------------------------TGGGTACT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1424798 34 - 111193037 GGCACTTGAGTATATA-CAATCATG------TGTGGGCACA i macFas5.chr13 C 0 C 0 s calJac3.chr14 1404354 41 - 108792865 GGCACATGTGTATATGGCATATATGATACTATGTGGGCTCG i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e rheMac8.chr13 1452205 0 + 108979918 C a score=9119.000000 s hg38.chr2_KI270774v1_alt 139354 8 + 223625 CATATATA s panTro5.chr2A 1426910 8 + 111504155 CATATATA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375845 8 + 114371477 CATATATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400486 8 + 1464242 TGCATATA i gorGor5.CYUI01015607v1 T 68 C 0 s nomLeu3.chr19 1123219 8 + 81552678 TGAGTATA i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1424832 8 - 111193037 TGTGTATA i macFas5.chr13 C 0 T 98 s calJac3.chr14 1404395 8 - 108792865 TGTGTATA i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e rheMac8.chr13 1452205 0 + 108979918 C a score=5190.000000 s hg38.chr2_KI270774v1_alt 139362 3 + 223625 TAG s panTro5.chr2A 1426918 3 + 111504155 TAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375853 3 + 114371477 TAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400494 3 + 1464242 TAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123227 3 + 81552678 TAG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1424742 3 - 111193037 TAG i macFas5.chr13 T 98 C 0 s calJac3.chr14 1404403 3 - 108792865 TGG i calJac3.chr14 C 0 T 237 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e rheMac8.chr13 1452205 0 + 108979918 C a score=49238.000000 s hg38.chr2_KI270774v1_alt 139365 31 + 223625 CATGCATGATAGTGTGTGGGCAGATGTGTAC s panTro5.chr2A 1426921 31 + 111504155 CATGTATGATAGTGTGTGGGCAGATGTGTAC i panTro5.chr2A C 0 T 204 s panPan2.chr2A 1375856 31 + 114371477 CATGTATGATCGTGTGTGGGCAGATGTGTAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400497 31 + 1464242 CATGTATGATAGTGTGTGGGCAGATGTGTAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123230 31 + 81552678 CATATACGATCATGTGTGGGCACATGTGTAT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1424745 31 - 111193037 CATATATGATCGTGGGTGGGCATGTGTGTAC i macFas5.chr13 C 0 C 0 s calJac3.chr14 1404169 31 - 108792865 CATTTATGATAGTGTGTGGGCAGATGTGTAT i calJac3.chr14 T 237 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e rheMac8.chr13 1452205 0 + 108979918 C a score=22299.000000 s hg38.chr2_KI270774v1_alt 139396 15 + 223625 ATAGCATGTATGATA s panTro5.chr2A 1426748 15 + 111504155 ATAGCATGTATGATA i panTro5.chr2A T 204 C 0 s panPan2.chr2A 1375887 15 + 114371477 ATAGCATGTATGATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400528 15 + 1464242 ATAGCATATATGATA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123261 15 + 81552678 ATGTCATATAAGATA i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1424776 15 - 111193037 ATAGCATATATGATA i macFas5.chr13 C 0 T 165 s calJac3.chr14 1404200 15 - 108792865 ACAGCATATATGGCA i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e rheMac8.chr13 1452205 0 + 108979918 C a score=-1271.000000 s hg38.chr2_KI270774v1_alt 139411 3 + 223625 C--TG s panTro5.chr2A 1426763 3 + 111504155 G--TG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375902 3 + 114371477 C--TG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400543 3 + 1464242 C--TG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123276 5 + 81552678 TTGTG i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1404215 3 - 108792865 --TTG i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e macFas5.chr13 1424791 165 - 111193037 T e rheMac8.chr13 1452205 0 + 108979918 C a score=7504.000000 s hg38.chr2_KI270774v1_alt 139414 8 + 223625 TGGGTACA s panTro5.chr2A 1426766 8 + 111504155 TGGGTACA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375905 8 + 114371477 TGGGTACA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400546 8 + 1464242 TGGGCACA i gorGor5.CYUI01015607v1 C 0 T 136 s nomLeu3.chr19 1123281 8 + 81552678 TGGGCACA i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1424626 8 - 111193037 TGGATACA i macFas5.chr13 T 165 C 0 s calJac3.chr14 1404218 2 - 108792865 TG------ i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e rheMac8.chr13 1452205 0 + 108979918 C a score=7811.000000 s hg38.chr2_KI270774v1_alt 139422 8 + 223625 CATATATA s panTro5.chr2A 1426774 8 + 111504155 CATATATA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375913 8 + 114371477 CATATATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400418 8 + 1464242 TGCATATA i gorGor5.CYUI01015607v1 T 136 C 0 s nomLeu3.chr19 1123289 8 + 81552678 TGTGTATA i nomLeu3.chr19 C 0 T 173 s macFas5.chr13 1424634 8 - 111193037 CATATATA i macFas5.chr13 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e calJac3.chr14 1404220 0 - 108792865 C e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e rheMac8.chr13 1452205 0 + 108979918 C a score=64485.000000 s hg38.chr2_KI270774v1_alt 139430 52 + 223625 TAGCATGTATGATCGCGTGTGGGCAGATGTGTACATAGCATGTATGATACTG-- s panTro5.chr2A 1426782 52 + 111504155 TAGCATGTATGATCGTGTGTGGGCAGATGTGTACATAGCATGTATGATACTG-- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375921 52 + 114371477 TAGCATGTATGATAGTGTGTGGGCAGATGTGTACATAGCATGTATGATACTG-- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400426 52 + 1464242 TAGCATATATGATAGTGTGTGGGCAGATGTGTACATAGCATGTATGATTCTG-- i gorGor5.CYUI01015607v1 C 0 T 136 s nomLeu3.chr19 1123124 52 + 81552678 TAGCATATATGATCTTGGGTGGGCACGTGTGTATATAGCATGTATGATAGTA-- i nomLeu3.chr19 T 173 C 0 s macFas5.chr13 1424642 52 - 111193037 TAGCATATAAGATAGCGTGTGGGCAGATGTGTATATGGCATATATGATAGTG-- i macFas5.chr13 C 0 C 0 s calJac3.chr14 1404220 35 - 108792865 -------------------TGGGCACGTGTGTACATAGCATATAACATAGTATG i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e rheMac8.chr13 1452205 0 + 108979918 C a score=32645.000000 s hg38.chr2_KI270774v1_alt 139482 30 + 223625 TGGGTACACATATATATAGCATGCATGATA s panTro5.chr2A 1426834 30 + 111504155 TGGGTACACATATATATAGCATGTATGATA i panTro5.chr2A C 0 I 68 s panPan2.chr2A 1375973 30 + 114371477 TGGGCACACATATATATAGCATGTATGATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400342 30 + 1464242 TGGGTACACATATATATAGCATGTATGATA i gorGor5.CYUI01015607v1 T 136 C 0 s nomLeu3.chr19 1123176 30 + 81552678 TGTGGTCACATCTATATAGCGTATAGGATT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1424694 30 - 111193037 TGTGGTCACGTGTATATAGCGTATAGGATT i macFas5.chr13 C 0 C 0 s calJac3.chr14 1404255 28 - 108792865 TGGGCACATGTGTATATGACATATGGTA-- i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e rheMac8.chr13 1452205 0 + 108979918 C a score=28365.000000 s hg38.chr2_KI270774v1_alt 139512 35 + 223625 GTGTGTGGGCAGATGTGTACATAGCATGTATGATA s panTro5.chr2A 1426932 35 + 111504155 GTGTGTGGGCAGATGTGTACATAGCATGTATGATA i panTro5.chr2A I 68 C 0 s panPan2.chr2A 1376003 35 + 114371477 GTGTGTGGGCAGATGTGTACATAGCATGTATGATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400372 35 + 1464242 GCGTGTGGGCAGATGTGTACATAGCATGTATGATA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123206 17 + 81552678 ATGTGTGGGTACTTGAG------------------ i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1424724 18 - 111193037 ACGTGTGGGCACGTGTAT----------------- i macFas5.chr13 C 0 C 0 s calJac3.chr14 1404283 35 - 108792865 GTGTATGGGCACGTGTGTATATGGCACATATGACA i calJac3.chr14 C 0 T 68 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e rheMac8.chr13 1452205 0 + 108979918 C a score=4041.000000 s hg38.chr2_KI270774v1_alt 139547 13 + 223625 CTGTGGGTACACA s panTro5.chr2A 1426967 13 + 111504155 CTGTGTGGTCACA i panTro5.chr2A C 0 I 2 s panPan2.chr2A 1376038 13 + 114371477 CTGTGTGGTCACA i panPan2.chr2A C 0 T 196 s gorGor5.CYUI01015607v1 1400407 13 + 1464242 CTGTGGGCACATG i gorGor5.CYUI01015607v1 C 0 I 2 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e calJac3.chr14 1404318 68 - 108792865 T e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e macFas5.chr13 1424742 0 - 111193037 C e rheMac8.chr13 1452205 0 + 108979918 C e nomLeu3.chr19 1123223 0 + 81552678 C a score=2184.000000 s hg38.chr2_KI270774v1_alt 139560 4 + 223625 TATA s panTro5.chr2A 1426982 4 + 111504155 TATA i panTro5.chr2A I 2 C 0 s gorGor5.CYUI01015607v1 1400422 4 + 1464242 TATA i gorGor5.CYUI01015607v1 I 2 C 0 s nomLeu3.chr19 1123223 4 + 81552678 TATA i nomLeu3.chr19 C 0 T 103 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e calJac3.chr14 1404318 68 - 108792865 T e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967010 81 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e macFas5.chr13 1424742 0 - 111193037 C e rheMac8.chr13 1452205 0 + 108979918 C e panPan2.chr2A 1376051 196 + 114371477 T a score=2730.000000 s hg38.chr2_KI270774v1_alt 139564 2 + 223625 TA s panTro5.chr2A 1426986 2 + 111504155 TA i panTro5.chr2A C 0 T 204 s gorGor5.CYUI01015607v1 1400426 2 + 1464242 TA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123124 2 + 81552678 TA i nomLeu3.chr19 T 103 C 0 s macFas5.chr13 1424742 2 - 111193037 TA i macFas5.chr13 C 0 C 0 s manLeu1.NW_012103754v1 967091 2 - 2200435 TA i manLeu1.NW_012103754v1 I 81 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e calJac3.chr14 1404318 68 - 108792865 T e colAng1.NW_012118821v1 1405373 0 - 13651311 C e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e rheMac8.chr13 1452205 0 + 108979918 C e panPan2.chr2A 1376051 196 + 114371477 T a score=20967.000000 s hg38.chr2_KI270774v1_alt 139566 12 + 223625 GCATGTATGATC s panTro5.chr2A 1426784 12 + 111504155 GCATGTATGATC i panTro5.chr2A T 204 C 0 s panPan2.chr2A 1375855 12 + 114371477 GCATGTATGATC i panPan2.chr2A T 196 C 0 s gorGor5.CYUI01015607v1 1400428 12 + 1464242 GCATATATGATA i gorGor5.CYUI01015607v1 C 0 T 68 s nomLeu3.chr19 1123126 12 + 81552678 GCATATATGATC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1424744 12 - 111193037 GCATATATGATC i macFas5.chr13 C 0 C 0 s manLeu1.NW_012103754v1 967093 12 - 2200435 GCATATATGATC i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e calJac3.chr14 1404318 68 - 108792865 T e colAng1.NW_012118821v1 1405373 0 - 13651311 C e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e rheMac8.chr13 1452205 0 + 108979918 C a score=54055.000000 s hg38.chr2_KI270774v1_alt 139578 35 + 223625 GTGTGTGGGCAGATGTGTACATAGCATGTATGATA s panTro5.chr2A 1426796 35 + 111504155 GTGTGTGGGCAGATGTGTACATAGCATGTATGATA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375867 35 + 114371477 GTGTGTGGGCAGATGTGTACATAGCATGTATGATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400372 35 + 1464242 GCGTGTGGGCAGATGTGTACATAGCATGTATGATA i gorGor5.CYUI01015607v1 T 68 C 0 s nomLeu3.chr19 1123138 35 + 81552678 TTGGGTGGGCACGTGTGTATATAGCATGTATGATA i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1424756 21 - 111193037 GTGGGTGGGCATGTGTGTACA-------------- i macFas5.chr13 C 0 C 0 s manLeu1.NW_012103754v1 967105 35 - 2200435 GTGGGTGGGCATGTGTGTACATAGCATATATGATA i manLeu1.NW_012103754v1 C 0 I 31 s calJac3.chr14 1404250 27 - 108792865 GTATGTGGGCACATGTGTATATGACAT-------- i calJac3.chr14 T 68 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e rheMac8.chr13 1452205 0 + 108979918 C a score=100.000000 s hg38.chr2_KI270774v1_alt 139613 1 + 223625 C s panTro5.chr2A 1426831 1 + 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375902 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400407 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123173 1 + 81552678 G i nomLeu3.chr19 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e calJac3.chr14 1404277 0 - 108792865 C e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967140 31 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e macFas5.chr13 1424777 0 - 111193037 C e rheMac8.chr13 1452205 0 + 108979918 C a score=71215.000000 s hg38.chr2_KI270774v1_alt 139614 62 + 223625 TGTGGGTACACATATATGTAGCATGTATGATAGTGTGTGGGCAGATGTGTACATAGCATGTA s panTro5.chr2A 1426832 62 + 111504155 TGTGGGTACACATATATATAGCATGTATGATAGTGTGTGGGCAGATGTGTACATAGCATGTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375903 62 + 114371477 TGTGGGTACACATATATATAGCATGTATGATAGTGTGTGGGCAGATGTGTACATAGCATGTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400408 62 + 1464242 TGTGGGCACATGCATATATAGCATATATGATAGTGTGTGGGCAGATGTGTACATAGCATGTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123174 48 + 81552678 TATGTGGTCACATCTATATAGCGTATAGGATTATGTGTGGGTACTTGA-------------- i nomLeu3.chr19 C 0 T 203 s macFas5.chr13 1424777 43 - 111193037 ------------------TAGCATATATGATAGCGTGTGGGCACTTGAGTATATACAATCA- i macFas5.chr13 C 0 C 0 s manLeu1.NW_012103754v1 967171 62 - 2200435 TGTGGGCACATGTGTATATAGCATGTAAGATAGTGTGTGGGCACGTGTGTATATAGCATGTA i manLeu1.NW_012103754v1 I 31 I 179 s calJac3.chr14 1404277 36 - 108792865 --------------------------ATGGTAGTGTATGGGCACGTGTGTATATGGCACATA i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e rheMac8.chr13 1452205 0 + 108979918 C a score=-149.000000 s hg38.chr2_KI270774v1_alt 139676 6 + 223625 TGATAC-- s panTro5.chr2A 1426894 6 + 111504155 TGATAC-- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375965 6 + 114371477 TGATAC-- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400470 6 + 1464242 TGATTC-- i gorGor5.CYUI01015607v1 C 0 C 0 s macFas5.chr13 1424820 2 - 111193037 TG------ i macFas5.chr13 C 0 C 0 s calJac3.chr14 1404313 8 - 108792865 TGACAGCC i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e manLeu1.NW_012103754v1 967233 179 - 2200435 I e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e rheMac8.chr13 1452205 0 + 108979918 C e nomLeu3.chr19 1123222 203 + 81552678 T a score=1911.000000 s hg38.chr2_KI270774v1_alt 139682 1 + 223625 T s panTro5.chr2A 1426900 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375971 1 + 114371477 T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400476 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s macFas5.chr13 1424822 1 - 111193037 T i macFas5.chr13 C 0 C 0 s manLeu1.NW_012103754v1 967412 1 - 2200435 T i manLeu1.NW_012103754v1 I 179 C 0 s calJac3.chr14 1404321 1 - 108792865 T i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327879 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e rheMac8.chr13 1452205 0 + 108979918 C e nomLeu3.chr19 1123222 203 + 81552678 T a score=25420.000000 s hg38.chr2_KI270774v1_alt 139683 12 + 223625 GTGGGCACATGC s panTro5.chr2A 1426901 12 + 111504155 GTGGGCACACAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375972 12 + 114371477 GTGGGCACACAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400477 12 + 1464242 GTGGGCACATGC i gorGor5.CYUI01015607v1 C 0 C 0 s macFas5.chr13 1424823 12 - 111193037 GTGGGCACATGT i macFas5.chr13 C 0 T 198 s manLeu1.NW_012103754v1 967413 12 - 2200435 GTGGGCACGTGT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1404322 12 - 108792865 GTGGGCACATGT i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1327879 12 + 1864846 GTGGGCAGATGT i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405373 0 - 13651311 C e chlSab2.chr14 1483536 0 - 107702431 C e cerAty1.NW_012000820v1 1406799 0 - 10304083 C e macNem1.NW_012011978v1 1452540 0 + 3644372 C e rheMac8.chr13 1452205 0 + 108979918 C e nomLeu3.chr19 1123222 203 + 81552678 T a score=54702.000000 s hg38.chr2_KI270774v1_alt 139695 8 + 223625 ATATATAG s panTro5.chr2A 1426913 8 + 111504155 ATATATAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375984 8 + 114371477 ATATATAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400489 8 + 1464242 ATATATAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123019 8 + 81552678 atatatag i nomLeu3.chr19 T 203 C 0 s rheMac8.chr13 1452205 8 + 108979918 ATATATAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1424637 8 - 111193037 ATATATAG i macFas5.chr13 T 198 C 0 s macNem1.NW_012011978v1 1452540 8 + 3644372 ATATATAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1406799 8 - 10304083 ATATATAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1483536 8 - 107702431 ATATATAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 967425 8 - 2200435 GTATATAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405373 8 - 13651311 ATATATAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404334 8 - 108792865 GTCTACAG i calJac3.chr14 C 0 T 173 s cebCap1.NW_016107827v1 1327891 8 + 1864846 GTATACAG i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=229203.000000 s hg38.chr2_KI270774v1_alt 139703 34 + 223625 CATATATGATAGTGTGTGGGCAGATGTGTACATA s panTro5.chr2A 1426921 34 + 111504155 CATGTATGATAGTGTGTGGGCAGATGTGTACATA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1375992 34 + 114371477 CATGTATGATAGTGTGTGGGCAGATGTGTACATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400497 34 + 1464242 CATGTATGATAGTGTGTGGGCAGATGTGTACATA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123027 34 + 81552678 catatatgatagtgtgtgggcagatgtgtatata i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452213 34 + 108979918 CATATAAGATAGCGTGTGGGCAGATGTGTATATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1424645 34 - 111193037 CATATAAGATAGCGTGTGGGCAGATGTGTATATG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1452548 34 + 3644372 CATATAAGATAGCGTGTGGGCAGATGTGTATATG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1406807 34 - 10304083 CATATAAGATAGCGTGTGGGCAGATGTGTATATG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1483544 33 - 107702431 TATATAAGATAGCGTGT-GGCAGATGTGTGTATG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 967433 34 - 2200435 CGTATAAGATAGTGTGTGGGCACGTGTGTATATA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405381 34 - 13651311 CGTATAAGACAGCGTGTGGGCAGATGTGTATATG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404169 34 - 108792865 CATTTATGATAGTGTGTGGGCAGATGTGTATACA i calJac3.chr14 T 173 C 0 s cebCap1.NW_016107827v1 1327899 34 + 1864846 CATATAGGGTAGTATGTGGGCATGTGTGTACATA i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=103958.000000 s hg38.chr2_KI270774v1_alt 139737 18 + 223625 GCATGTATGATACTGTGT s panTro5.chr2A 1426955 18 + 111504155 GCATGTATGATACTGTGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376026 18 + 114371477 GCATGTATGATACTGTGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400531 18 + 1464242 GCATATATGATACTGTGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123061 18 + 81552678 gCATGTATGATAGTGTGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452247 18 + 108979918 GCATATATGATAGTGTGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1424679 18 - 111193037 GCATATATGATAGTGTGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1452582 18 + 3644372 GCATATATGATAGTGTGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1406841 18 - 10304083 ACATATATGATAGTGTGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1483577 18 - 107702431 GCATATATGATAGTGTGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 967467 18 - 2200435 GGATATAAGATAGTGTGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405415 18 - 13651311 GCATCTATGATAGTGTGT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404203 18 - 108792865 GCATATATGGCATTGTGT i calJac3.chr14 C 0 I 210 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327933 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=5159.000000 s hg38.chr2_KI270774v1_alt 139755 1 + 223625 G s panTro5.chr2A 1426973 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376044 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400549 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123079 1 + 81552678 A i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452265 1 + 108979918 G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1424697 1 - 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1452600 1 + 3644372 G i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1406859 1 - 10304083 G i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1483595 1 - 107702431 G i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 967485 1 - 2200435 G i manLeu1.NW_012103754v1 C 0 I 5539 s colAng1.NW_012118821v1 1405433 1 - 13651311 G i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327933 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e calJac3.chr14 1404221 210 - 108792865 I a score=53291.000000 s hg38.chr2_KI270774v1_alt 139756 57 + 223625 GTCACAAGTATATAGCATATAGGATTATGTGTGGGCACATGTATTGGCAC-----ATCACAG s panTro5.chr2A 1426974 57 + 111504155 GTCACAAGTATATAGCATATAGGATTATGTGTGGGCACATGTATTGGCAC-----ATCGCAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376045 57 + 114371477 GTCACAAGTATATAGCATATAGGATTATGTGTGGGCACATGTATTGGCAC-----ATCGCAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400550 57 + 1464242 CACATGCATACATAGCGTATAGAATTACGTGTGGGCACATGTATTGGCAC-----ATCGCGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123080 62 + 81552678 GTCATGTGTATATAGCGTATAGGATTATGTGTGGGCACATGTATTAGCATATATGATCTTGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452266 27 + 108979918 GTCACGTGTATATAGCGTATAGGATTA----------------------------------- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1424698 44 - 111193037 GTCACGTGTATATAGCGTATAGGATTACGTGTGGGCACGTGTAT------------------ i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1452601 44 + 3644372 GTCACGTGTATATAGCTTATAGGATTACGTGTGGGCACGTGTAT------------------ i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1406860 27 - 10304083 GTCACGTGTATATAGCATATAGGATTA----------------------------------- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1483596 5 - 107702431 GTCAC--------------------------------------------------------- i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1405434 5 - 13651311 GTCAC--------------------------------------------------------- i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327933 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e calJac3.chr14 1404221 210 - 108792865 I e manLeu1.NW_012103754v1 967486 5539 - 2200435 I a score=9978.000000 s hg38.chr2_KI270774v1_alt 139813 9 + 223625 GTGGGCTCG s panTro5.chr2A 1427031 9 + 111504155 GTGGGCACA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376102 9 + 114371477 GTGGGCACA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400607 9 + 1464242 GTGGGCAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123142 9 + 81552678 GTGGGCACG i nomLeu3.chr19 C 0 C 0 s manLeu1.NW_012103754v1 973025 9 - 2200435 GTGGGCACG i manLeu1.NW_012103754v1 I 5539 T 6016 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327933 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e calJac3.chr14 1404221 210 - 108792865 I e colAng1.NW_012118821v1 1405439 0 - 13651311 C e chlSab2.chr14 1483601 0 - 107702431 C e cerAty1.NW_012000820v1 1406887 0 - 10304083 C e macNem1.NW_012011978v1 1452645 0 + 3644372 C e macFas5.chr13 1424742 0 - 111193037 C e rheMac8.chr13 1452293 0 + 108979918 C a score=37663.000000 s hg38.chr2_KI270774v1_alt 139822 32 + 223625 TGTGTATATAGCATGTATGATATTGTGTGGT----C s panTro5.chr2A 1427040 32 + 111504155 TGTGTATATAGCATGTATGATATTGTGTAGT----C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376111 32 + 114371477 TGTGTATATAGCATGTATGATATTGTGTGGT----C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400616 32 + 1464242 TGTGTATATAGCATGTATGATACTGTGTGGT----C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123151 34 + 81552678 TGTGTATATAGCATGTATGATAGTATGTGGTCA--C i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1424742 28 - 111193037 --------TAGCATATATGATCGTGGGTGGGCATGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1452645 13 + 3644372 --------TAGCATATATGAT--------------- i macNem1.NW_012011978v1 C 0 C 0 s manLeu1.NW_012103754v1 967018 34 - 2200435 TGTGTATATGGCATATATGATAGTGTGTGGTCA--A i manLeu1.NW_012103754v1 T 6016 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327933 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e calJac3.chr14 1404221 210 - 108792865 I e colAng1.NW_012118821v1 1405439 0 - 13651311 C e chlSab2.chr14 1483601 0 - 107702431 C e cerAty1.NW_012000820v1 1406887 0 - 10304083 C e rheMac8.chr13 1452293 0 + 108979918 C a score=105930.000000 s hg38.chr2_KI270774v1_alt 139854 39 + 223625 GTGTATATAGCATATAGGATTATG-------------------------------------TGTGGGCATGTGTAT s panTro5.chr2A 1427072 39 + 111504155 GTGTATATAGCATATAGGATTATG-------------------------------------TGTGGGCATATGTAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376143 39 + 114371477 GTGTATATAGCATATAGGATTATG-------------------------------------TGTGGGCATGTGTAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400648 39 + 1464242 GTGTATATAGCGTATAGGATTACG-------------------------------------TGTGGGCATGTATAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123185 25 + 81552678 ATCTATATAGCGTATAGGATTATG-------------------------------------T-------------- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452293 17 + 108979918 ----------------------CG-------------------------------------TGTGGGCACGTGTAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1424770 36 - 111193037 GTGTACATAGCATATATGATAGCG-------------------------------------TGTGGGCACTTG--- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1452658 51 + 3644372 ----------------------CGTGGGTGGGCATGTGTGTACATAGCATATATGATAGCGTGTGGGCACTTG--- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1406887 17 - 10304083 ----------------------CG-------------------------------------TGTGGGCACGTGTAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1483601 39 - 107702431 GTGTATATAGCGTATAGGATTACG-------------------------------------TGTGGGCACGTGTAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 967052 39 - 2200435 GTGTATATAGCATATAGGATTACG-------------------------------------TGTGGGCACGTGTAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405439 39 - 13651311 GTGTATATAGCGTATAGGATTATG-------------------------------------TGTGGGCACGTGTAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404431 39 - 108792865 GTGTATATGGCATATAAGATGGTG-------------------------------------TGTGGGCATGTGTGT i calJac3.chr14 I 210 T 308 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327933 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=131117.000000 s hg38.chr2_KI270774v1_alt 139893 31 + 223625 TAGCATATATGATCTCGGGTGGGCACGTGTG s panTro5.chr2A 1427111 31 + 111504155 TAGCATATATGATCTCAGGTGGGCACGTGTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376182 31 + 114371477 TAGCATATATGATCTCGGGTGGGCACGTGTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400687 31 + 1464242 TAGCATATATGATCTCGGGTGGGCACATGTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123210 13 + 81552678 ------------------GTGGGTACTTGAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452310 31 + 108979918 TAGCATATATGATCGTGGGTGGGCATGTGTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1424806 30 - 111193037 -AGTATATACAATCATGTGTGGGCACATGTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1452709 30 + 3644372 -AGTATATACAATCATGTGTGGGCACATGTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1406904 31 - 10304083 TAGCATATATGATCGTGGGTGGGCATGTGTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1483640 31 - 107702431 TAGCATATATGATCGTGGGTGGGCATGTGTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 967091 31 - 2200435 TAGCATATATGATCGTGGGTGGGCATGTGTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405478 31 - 13651311 TAGCATATATGATCGTGGGTGGGCATGTGTG i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327933 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e calJac3.chr14 1404470 308 - 108792865 T a score=34165.000000 s hg38.chr2_KI270774v1_alt 139924 6 + 223625 TATATG s panTro5.chr2A 1427142 6 + 111504155 TATATG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376213 6 + 114371477 TATATG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400718 6 + 1464242 TATATG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123223 6 + 81552678 TATATA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452341 6 + 108979918 TACATA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1424836 6 - 111193037 TATATA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1452739 6 + 3644372 TATATA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1406935 6 - 10304083 TACATA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1483671 6 - 107702431 TATATA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 967122 6 - 2200435 TACATA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405509 6 - 13651311 TATATA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404162 6 - 108792865 TATATG i calJac3.chr14 T 308 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1327933 0 + 1864846 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=123335.000000 s hg38.chr2_KI270774v1_alt 139930 33 + 223625 GCATATAAGATAGTGTGTG---------------------------------------------------------------GGCACGTGTGT--ATA s panTro5.chr2A 1427148 33 + 111504155 GCATATAAGATAGTGTGTG---------------------------------------------------------------GGCACGTGTGT--ATA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376219 33 + 114371477 GCATATAAGATAGTGTGTG---------------------------------------------------------------GGCACGTGTGT--ATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400724 33 + 1464242 GCATATAAGATAGTGTGTG---------------------------------------------------------------GGCACGTGTGT--ATA i gorGor5.CYUI01015607v1 C 0 I 105 s nomLeu3.chr19 1123229 33 + 81552678 GCATATACGATCATGTGTG---------------------------------------------------------------GGCACATGTGT--ATA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452347 96 + 108979918 GCATATATGATAGCGTGTGGGCACTTGAGTATATACAATCATGTGTGGGCACATGTGTATATAGCATGTAAGATAGTGTGTGGGCACGTGTGT--ATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1424842 33 - 111193037 GCATGTAAGATAGTGTGTG---------------------------------------------------------------GGCACGTGTGT--ATA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1452745 33 + 3644372 GCATGTAAGATAGTGTGTG---------------------------------------------------------------GGCACGTGTGT--ATA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1406941 96 - 10304083 GCATATATGATAGCGTGTGGGCACTTGAGTATATACAATCATGTGTGGGCACATGTGTATATAGCATGTAAGATAGTGTG--TGGGCACGTGTGTATA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1483677 61 - 107702431 GCATATATGATAGCGTGTGGGCACTTGAGTATATACGATCATGTGTG-----------------------------------GGCACATGTGT--ATA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 967128 53 - 2200435 GCATATATGATAGCGTGTGGGCACTTGAGTATATACAATCATGTGTG-----------------------------------GGCACA---------- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405515 31 - 13651311 GCATATAAG--AGTGTGTG---------------------------------------------------------------GGCACATGTGT--ATA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404168 33 - 108792865 TCATTTATGATAGTGTGTG---------------------------------------------------------------GGCAGATGTGT--ATA i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1327933 29 + 1864846 --GCATATAACAGTGTGTG---------------------------------------------------------------GGC--ACGTGT--ATA i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=57203.000000 s hg38.chr2_KI270774v1_alt 139963 23 + 223625 TGGCACATAAGATAGTGTGTGGG s panTro5.chr2A 1427181 23 + 111504155 TGGCATATAAGATAGTGTGTGGG i panTro5.chr2A C 0 I 35 s panPan2.chr2A 1376252 5 + 114371477 TGGCA------------------ i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400862 23 + 1464242 TGGTGTATAACATACTGTGTGGG i gorGor5.CYUI01015607v1 I 105 C 0 s nomLeu3.chr19 1123262 23 + 81552678 TGTCATATAAGATATTGTGTGGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452443 20 + 108979918 TAGCATGTAAGAGTGT---TGGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1424875 20 - 111193037 TAGCATGTAAGAGTGT---TGGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1452778 20 + 3644372 TAGCATGTGAGAGTGT---TGGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407037 20 - 10304083 TAGCATGTAAGAGTGT---TGGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1483738 23 - 107702431 TAGCATGTAAGATAGTGTGTGGG i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1405546 23 - 13651311 CAGCATATAAGATACTGTGTGGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404201 23 - 108792865 CAGCATATATGGCATTGTGTGGG i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1327962 23 + 1864846 TGGTATATATGATAGCGTGTGGG i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e manLeu1.NW_012103754v1 967181 0 - 2200435 C a score=72521.000000 s hg38.chr2_KI270774v1_alt 139986 14 + 223625 CACGTGTGTATATG s panTro5.chr2A 1427239 14 + 111504155 CACATATGTATATG i panTro5.chr2A I 35 C 0 s gorGor5.CYUI01015607v1 1400885 14 + 1464242 CACGTGTGTATGTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123285 14 + 81552678 CACATGTGTATAAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452463 14 + 108979918 CACGTGTGTATATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1424895 14 - 111193037 CACGTGTGTATATG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1452798 14 + 3644372 CACGTGTGTATATG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407057 14 - 10304083 CACGTTTGTATATG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1483761 14 - 107702431 CACGTGTGTATATA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 967181 10 - 2200435 ----TGTGTATATA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405569 14 - 13651311 CATGTGTGTATATG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404224 14 - 108792865 CACGTGTGTACATA i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1327985 12 + 1864846 CAC--GTGTATATG i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 132501 51 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e panPan2.chr2A 1376257 0 + 114371477 C a score=62556.000000 s hg38.chr2_KI270774v1_alt 140000 8 + 223625 GCATATAA s panTro5.chr2A 1427253 8 + 111504155 GCATATAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376257 5 + 114371477 ---TATAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400899 8 + 1464242 GCACATAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123299 8 + 81552678 GCATATAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452477 8 + 108979918 GCATATAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1424909 8 - 111193037 GCATATAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1452812 8 + 3644372 GCATATAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407071 8 - 10304083 GCATATAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1483775 8 - 107702431 GCATGTAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 967191 8 - 2200435 GCATGTAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405583 8 - 13651311 GCATATAA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404238 8 - 108792865 GCATATAA i calJac3.chr14 C 0 I 33 s cebCap1.NW_016107827v1 1327997 8 + 1864846 GCATATAT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 132552 8 + 287728 GCATATAC i aotNan1.NW_018513311v1 I 51 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=260337.000000 s hg38.chr2_KI270774v1_alt 140008 45 + 223625 GATAGTGTGTGGGCACGTGTGTATATGGCATATAAGATAGTGTGT s panTro5.chr2A 1427261 45 + 111504155 GATACTGTGTGGGCACATGTGTATATAGGATATAAGATAGTGTGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376262 45 + 114371477 GATAGTGTGTGGGCACGTGTGTATATGGCATATAAGATAGTGTGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400907 45 + 1464242 GATAGTGTGTGGGCACGTGTGTGTGTAGCATATAAGATAGTGTGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123307 45 + 81552678 GATAGTGTGTGGGCACGTGTGTATATGGCATATAAGACAGTGTGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452485 39 + 108979918 GAT----TGTGGGCACATGTGTATATGGCATATAAGAG--TGTGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1424917 39 - 111193037 GAT----TGTGGGCACATGTGTATATGGCATATAAGAG--TGTGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1452820 39 + 3644372 GAT----TGTGGGCACATGTGTATATGGCATATAAGAG--TGTGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407079 39 - 10304083 GAT----TGTGGGCACATGTGTATATGGCATATAAGAG--TGTGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1483783 39 - 107702431 G--AGTGTGTGGGCACATGTGTATATGGAATATAAGAT--TG--T i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 967199 42 - 2200435 GATAGTGTGTGGGCACGTGTGTATATAGCATGTAAGAG--TGT-T i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405591 45 - 13651311 GATAGTGTGTGGGCATGGGTGTATATATCGTATAAGATACTGTGT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404279 45 - 108792865 GGTAGTGTATGGGCACGTGTGTATATGGCACATATGACAGCCTGT i calJac3.chr14 I 33 C 0 s cebCap1.NW_016107827v1 1328005 43 + 1864846 GATAGCGTGTGGGCAC--GTGTATATGGCACATATGGTAGTGTGT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 132560 45 + 287728 GGTAGCGTGTGGGCACATGTGTATATGGCATGTAAGATGGTGTGT i aotNan1.NW_018513311v1 C 0 I 50 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=174849.000000 s hg38.chr2_KI270774v1_alt 140053 25 + 223625 GGGCACGTGTGTATATGGCATATAA s panTro5.chr2A 1427306 25 + 111504155 GGGCACGTGTGTATATAGCATATAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376307 25 + 114371477 GGGCACGTGTGTATATGGCATATAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400952 25 + 1464242 GGGCACTTGTGTATATGGTGTATAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123352 25 + 81552678 GGGCACATGTGTatataggatataa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452524 25 + 108979918 GGGCATGTGTGTATATAGCATATAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1424956 25 - 111193037 GGGCATGTGTGTATATAGCATATAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1452859 25 + 3644372 GGGTATGTGTGTATATAGCATATAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407118 25 - 10304083 GGGCATGTGTGTATATAGCATATAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1483822 25 - 107702431 GGGCACATGTGTATATGGCATATAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 967241 25 - 2200435 GGGCACGTTTGTATATGGCATATAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405636 25 - 13651311 GGGCACGTGTGTATATAGGATGTAA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404324 25 - 108792865 GGGCACATGTGTCTACAGCATATGA i calJac3.chr14 C 0 T 35 s cebCap1.NW_016107827v1 1328048 25 + 1864846 GGGTACATGTGTATATGGCATATAA i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=7800.000000 s hg38.chr2_KI270774v1_alt 140078 1 + 223625 G s panTro5.chr2A 1427331 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376332 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400977 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123377 1 + 81552678 g i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452549 1 + 108979918 G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1424981 1 - 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1452884 1 + 3644372 G i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407143 1 - 10304083 G i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 967266 1 - 2200435 G i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405661 1 - 13651311 G i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404314 1 - 108792865 G i calJac3.chr14 T 35 C 0 s cebCap1.NW_016107827v1 1328073 1 + 1864846 G i cebCap1.NW_016107827v1 C 0 I 79 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e chlSab2.chr14 1483847 0 - 107702431 C a score=42807.000000 s hg38.chr2_KI270774v1_alt 140079 10 + 223625 ACAGTGTGTG s panTro5.chr2A 1427332 10 + 111504155 ACAGTGTGTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376333 10 + 114371477 ACAGTGTGTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400978 10 + 1464242 ACAGTGTGTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123378 10 + 81552678 atagtgtgtg i nomLeu3.chr19 C 0 I 35 s rheMac8.chr13 1452550 10 + 108979918 ACAGTGCGTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1424982 10 - 111193037 ACAGTGCGTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1452885 10 + 3644372 ACAGTGTGTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407144 10 - 10304083 ACAGTGCGTG i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 967267 6 - 2200435 AT----TGTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405662 10 - 13651311 ATAGTGTGTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404315 10 - 108792865 ACAGCCTGTG i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e chlSab2.chr14 1483847 0 - 107702431 C a score=100493.000000 s hg38.chr2_KI270774v1_alt 140089 22 + 223625 GGAACGTGTTTATATGGCATAT s panTro5.chr2A 1427342 22 + 111504155 GACACATGTGTATATAGTATAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376343 22 + 114371477 GGAACGTGTTTATATGGCATAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1400988 22 + 1464242 GGAATGTGTTTATATGGCACAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123423 22 + 81552678 ggcacgtgtatatatgagatat i nomLeu3.chr19 I 35 C 0 s rheMac8.chr13 1452560 22 + 108979918 GGCATGTGTGTATATGGCATAT i rheMac8.chr13 C 0 I 12 s macFas5.chr13 1424992 22 - 111193037 GGCATGTGTGTATATGGCATAT i macFas5.chr13 C 0 I 79 s macNem1.NW_012011978v1 1452895 22 + 3644372 GGCATGTGTGTATATGGCATAT i macNem1.NW_012011978v1 C 0 I 12 s cerAty1.NW_012000820v1 1407154 22 - 10304083 GGCATGTGTGTATATGGCATAT i cerAty1.NW_012000820v1 C 0 I 12 s manLeu1.NW_012103754v1 967273 22 - 2200435 GGCACATGTGTATATGGCATAT i manLeu1.NW_012103754v1 C 0 I 2 s colAng1.NW_012118821v1 1405672 22 - 13651311 GGCACGTGTGTATATGGCACAC i colAng1.NW_012118821v1 C 0 I 4 s calJac3.chr14 1404325 22 - 108792865 GGCACATGTGTCTACAGCATAT i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e chlSab2.chr14 1483847 0 - 107702431 C a score=2416.000000 s hg38.chr2_KI270774v1_alt 140111 5 + 223625 GAGAT s panTro5.chr2A 1427364 5 + 111504155 AAGAT i panTro5.chr2A C 0 T 165 s panPan2.chr2A 1376365 5 + 114371477 GAGAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401010 5 + 1464242 AAGAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123445 5 + 81552678 aagat i nomLeu3.chr19 C 0 I 4 s rheMac8.chr13 1452594 3 + 108979918 --TAC i rheMac8.chr13 I 12 I 2 s macFas5.chr13 1425093 3 - 111193037 --TAG i macFas5.chr13 I 79 I 2 s macNem1.NW_012011978v1 1452929 3 + 3644372 --TAC i macNem1.NW_012011978v1 I 12 I 2 s cerAty1.NW_012000820v1 1407188 3 - 10304083 --TAC i cerAty1.NW_012000820v1 I 12 I 2 s chlSab2.chr14 1483847 3 - 107702431 --GAG i chlSab2.chr14 C 0 I 2 s manLeu1.NW_012103754v1 967297 3 - 2200435 --GAG i manLeu1.NW_012103754v1 I 2 I 2 s colAng1.NW_012118821v1 1405698 3 - 13651311 --TAG i colAng1.NW_012118821v1 I 4 I 2 s calJac3.chr14 1404347 3 - 108792865 --GAT i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=134685.000000 s hg38.chr2_KI270774v1_alt 140116 34 + 223625 TGTGGGCACGTGCGTTTATGGCACATAAGATAGT s panPan2.chr2A 1376370 34 + 114371477 TGTGGGCACGTGCGTTTATGGCACATAAGATAGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401015 34 + 1464242 TGTGGGCACATGTGTATATGGCACATAAGATAGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123454 34 + 81552678 tgtgggcatgtgggtatataggatataagatagt i nomLeu3.chr19 I 4 C 0 s rheMac8.chr13 1452599 31 + 108979918 TGTGGGCATGTGTGTTTATA-CATATAAG--AGT i rheMac8.chr13 I 2 C 0 s macFas5.chr13 1425098 34 - 111193037 TGTGGGCACGTGTGTATATAGGATATAAGATAGT i macFas5.chr13 I 2 C 0 s macNem1.NW_012011978v1 1452934 31 + 3644372 TGTGGGCATGTGTGTTTATA-CATATAAG--AGT i macNem1.NW_012011978v1 I 2 C 0 s cerAty1.NW_012000820v1 1407193 31 - 10304083 TGTGGGCATGTGTGTTTATA-CATATAAG--AGT i cerAty1.NW_012000820v1 I 2 C 0 s chlSab2.chr14 1483852 34 - 107702431 TGTGGGCATGTGTGTATATAGCATATAAGACAGT i chlSab2.chr14 I 2 C 0 s manLeu1.NW_012103754v1 967302 34 - 2200435 TGTGGGCATGTGTGTATATAGCATATAAGATAGT i manLeu1.NW_012103754v1 I 2 C 0 s colAng1.NW_012118821v1 1405703 32 - 13651311 TGTGGGCA--TGTGTCTATGGCACATAAGATAGT i colAng1.NW_012118821v1 I 2 T 138 s calJac3.chr14 1404350 34 - 108792865 TGTGGGCACATGTGTATATGGCATATATGATACT i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e panTro5.chr2A 1427369 165 + 111504155 T a score=21109.000000 s hg38.chr2_KI270774v1_alt 140150 5 + 223625 GTGCA s panPan2.chr2A 1376404 5 + 114371477 GTGCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401049 5 + 1464242 GTGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123488 5 + 81552678 gtgtg i nomLeu3.chr19 C 0 T 105 s rheMac8.chr13 1452630 5 + 108979918 GTGTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425132 5 - 111193037 GTGTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1452965 5 + 3644372 GTGTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407224 5 - 10304083 GTGTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1483886 5 - 107702431 GCGTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 967336 5 - 2200435 GCGTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405597 5 - 13651311 GTGTG i colAng1.NW_012118821v1 T 138 C 0 s calJac3.chr14 1404384 5 - 108792865 ATGTG i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e panTro5.chr2A 1427369 165 + 111504155 T a score=73920.000000 s hg38.chr2_KI270774v1_alt 140155 14 + 223625 GGCACGTGTGTATA s panPan2.chr2A 1376409 14 + 114371477 GGCACGTGTGTATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401054 14 + 1464242 GGCACGTGTGTATA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123388 14 + 81552678 ggcatgtgggtata i nomLeu3.chr19 T 105 C 0 s rheMac8.chr13 1452635 14 + 108979918 GGCACGTGTGTATA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425137 14 - 111193037 AGCATGTGTGTATG i macFas5.chr13 C 0 T 137 s macNem1.NW_012011978v1 1452970 14 + 3644372 GGCACGTGTGTATA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407229 14 - 10304083 GGCACGTGTGTATA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1483891 14 - 107702431 GGCATGTGTGTATA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 967341 14 - 2200435 GGCATGTGTGTATA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405602 14 - 13651311 GGCATGGGTGTATA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404389 14 - 108792865 GGCTCGTGTGTATA i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e panTro5.chr2A 1427369 165 + 111504155 T a score=28864.000000 s hg38.chr2_KI270774v1_alt 140169 8 + 223625 TGGTATAT s panPan2.chr2A 1376423 8 + 114371477 TGGCATAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401068 8 + 1464242 TCGCATAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123402 8 + 81552678 taggatat i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452649 8 + 108979918 TATCGTAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425014 8 - 111193037 TGGCATAT i macFas5.chr13 T 137 C 0 s macNem1.NW_012011978v1 1452984 8 + 3644372 TATCGTAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407243 8 - 10304083 TATCGTAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1483905 8 - 107702431 TGGCATAT i chlSab2.chr14 C 0 I 42 s manLeu1.NW_012103754v1 967355 8 - 2200435 TGGCATAT i manLeu1.NW_012103754v1 C 0 I 8 s colAng1.NW_012118821v1 1405616 8 - 13651311 TATCGTAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404403 8 - 108792865 TGGCATAT i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e panTro5.chr2A 1427369 165 + 111504155 T a score=67499.000000 s hg38.chr2_KI270774v1_alt 140177 15 + 223625 AAGATAGCGTGTGGA s panPan2.chr2A 1376431 15 + 114371477 AAGATAGCGTGTGGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401076 15 + 1464242 GAGATAGTGTGTGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123410 15 + 81552678 aagatagcatgtggg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452657 15 + 108979918 AAGATAGTGCGTGGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425022 15 - 111193037 AAGATACTGTGTGGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1452992 15 + 3644372 AAGATAGTGTGTGGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407251 15 - 10304083 AAGATAGTGTGTGGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1483955 13 - 107702431 --AAGAGTGTGTGGG i chlSab2.chr14 I 42 C 0 s manLeu1.NW_012103754v1 967371 15 - 2200435 AAGATACTGTGTGGG i manLeu1.NW_012103754v1 I 8 C 0 s colAng1.NW_012118821v1 1405624 15 - 13651311 AAGATACTGTGTGGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404411 15 - 108792865 ATGGTAGTGTGTGGG i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e panTro5.chr2A 1427369 165 + 111504155 T a score=261977.000000 s hg38.chr2_KI270774v1_alt 140192 47 + 223625 CACGTGTGTATATAGGAAATAATATAGTGTGTGGGCACATATGTATA s panTro5.chr2A 1427204 47 + 111504155 CACGTGTGTATATAGGATATAATATAGTGTGTGGGCACATATGTATA i panTro5.chr2A T 165 C 0 s panPan2.chr2A 1376446 47 + 114371477 CACGTGTGTATATAGGATATAATATAGTGTGTGGGCACATATGTATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401091 47 + 1464242 CATGTGTGTATATAGGATATAAGATAGTGTGTGGGCATGTATGTATA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123425 47 + 81552678 cacgtgtatatatgagatataagatagtgtgtgggcatgtgggtata i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452672 47 + 108979918 CACGTGTGTATATAGGATATAAGATAGTGTGTGAGCATGTGTGTATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425037 44 - 111193037 CATGTGTGTTTATA-CATATAAG--AGTGTGTGGGCACGTGTGTATA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453007 47 + 3644372 CACGTGTGTATATAGGATATAAGATAGTGTGTGAGCATGTGTGTATG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407266 47 - 10304083 CACGTGTGTATATAGGATATAAGATAGTGTGTGAGCATGTGTGTATG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1483968 47 - 107702431 CACGTGTGTATATAGGATATAAGATAGTGTGTGAGCATGTGTGTATG i chlSab2.chr14 C 0 T 102 s manLeu1.NW_012103754v1 967386 44 - 2200435 CATGTGTGTTTATA-CATATAAG--AGTGTGTGGGCACGTGTGTATA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405639 47 - 13651311 CACGTGTGTATATAGGATGTAAGATAGTGTGTGGGCACGTGTGTATA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404426 47 - 108792865 CACGTGTGTATATGGCATATAAGATGGTGTGTGGGCATGTGTGTATA i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=126658.000000 s hg38.chr2_KI270774v1_alt 140239 23 + 223625 TGGCATATAAGATACTGTGTGGG s panTro5.chr2A 1427251 23 + 111504155 TGGCATATAAGATACTGTGTGGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376493 23 + 114371477 TGGCATATAAGATACTGTGTGGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401138 23 + 1464242 TGGCATATAGGATAGTGTGTGGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123472 23 + 81552678 taggatataagatagtgtgtggg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452719 23 + 108979918 TGGCATATAAGATACTGTGTGGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425081 23 - 111193037 TATCGTATAAGATAGTGTGTGGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453054 23 + 3644372 TGGCATATAAGATACTGTGTGGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407313 23 - 10304083 TGGCATATAAGATACTGTGTGGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1483913 23 - 107702431 TGGCATATAAGATACTGTGTGGG i chlSab2.chr14 T 102 C 0 s manLeu1.NW_012103754v1 967430 23 - 2200435 TATCGTATAAGATAGTGTGTGGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405686 23 - 13651311 TGGCACACAAAATAGTGTGTGGG i colAng1.NW_012118821v1 C 0 T 140 s calJac3.chr14 1404473 21 - 108792865 TATC--ATAAGATAGTGTGTGAC i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=113830.000000 s hg38.chr2_KI270774v1_alt 140262 27 + 223625 CACATGTGTATATAGGATATAAGATAG s panTro5.chr2A 1427274 27 + 111504155 CACATGTGTATATAGGATATAAGATAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376516 27 + 114371477 CACATGTGTATATAGGATATAAGATAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401161 27 + 1464242 CACATGTGTATATAGCATATAAGATAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123495 27 + 81552678 catgtgtgtatataggatataagatag i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452742 25 + 108979918 CACATGTGTTTATAGCATATAAG--AG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425104 27 - 111193037 CACGTGTGTATATAGGATATAAGATAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453077 25 + 3644372 CACATGTGTTTATAGCATATAAG--AG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407336 25 - 10304083 CACGTGTGTTTATAGCATATAAG--AG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1483936 14 - 107702431 CATGTGTGTTTATA------------- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 967453 27 - 2200435 CACGTGTGTATATAGGATATAAGATAG i manLeu1.NW_012103754v1 C 0 I 5542 s colAng1.NW_012118821v1 1405569 27 - 13651311 CATGTGTGTATATGGCATATAAGATAG i colAng1.NW_012118821v1 T 140 C 0 s calJac3.chr14 1404494 27 - 108792865 CATGTGTGTTTAATGCATTTATAATAA i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=165980.000000 s hg38.chr2_KI270774v1_alt 140289 37 + 223625 TGTGTGGGCACGTGTGTATATAGCATATAAGACAGTG s panTro5.chr2A 1427301 37 + 111504155 TGTGTGGGCACGTGTGTATATAGCATATAAGACAGTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376543 37 + 114371477 TGTGTGGGCACGTGTGTATATAGCATATAAGACAGTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401188 37 + 1464242 TATGCAGGGATGTGTGTATATAGCATATGAGACAGTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123522 37 + 81552678 cgtgtgggcacgtgtatatatgagatataagatagtg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452767 37 + 108979918 TGTGTGGGCATGTGTGTATATATCGTATAAGATACTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425131 37 - 111193037 TGTGTGAGCATGTGTGTATGTGGCATATAAGATACTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453102 37 + 3644372 TGTGTGGGCATGTGTGTATATATCGTATAAGATACTG i macNem1.NW_012011978v1 C 0 T 138 s cerAty1.NW_012000820v1 1407361 37 - 10304083 TGTGTGGGCATGTGTGTATATATCGTATAAGATACTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1483950 12 - 107702431 -----------------------CATATAAG--AGTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 973022 37 - 2200435 TGTGTGGGCACGTGTGTATATAGGATATAAGATAGTG i manLeu1.NW_012103754v1 I 5542 C 0 s colAng1.NW_012118821v1 1405596 37 - 13651311 TGTGTGGGCATGGGTGTATATATCGTATAAGATACTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404521 37 - 108792865 TGTGTGGGCGTGTGTGTATATGGCACATATGATGGCT i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=55572.000000 s hg38.chr2_KI270774v1_alt 140326 9 + 223625 TGTGGACAC s panTro5.chr2A 1427338 9 + 111504155 TGTGGACAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376580 9 + 114371477 TGTGGACAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401225 9 + 1464242 TGTGAGCAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123559 9 + 81552678 tgtgggcat i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452804 9 + 108979918 TGTGGGCAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425168 9 - 111193037 TGTGGGCAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453001 9 + 3644372 TGTGGGCAC i macNem1.NW_012011978v1 T 138 C 0 s cerAty1.NW_012000820v1 1407398 9 - 10304083 TGTGGGCAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1483962 9 - 107702431 TGTGGGCAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 973059 9 - 2200435 TGTGGGCAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405633 9 - 13651311 TGTGGGCAC i colAng1.NW_012118821v1 C 0 I 93 s calJac3.chr14 1404558 9 - 108792865 TGTGGGTGT i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=84492.000000 s hg38.chr2_KI270774v1_alt 140335 22 + 223625 ATGTGTATATAGTATATAAGAT s panTro5.chr2A 1427347 22 + 111504155 ATGTGTATATAGTATATAAGAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376589 22 + 114371477 ATGTGTATATAGTATATAAGAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401234 10 + 1464242 GTGTGTATAT------------ i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123568 22 + 81552678 gtgtgtatataggatataagat i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452813 22 + 108979918 ATGTGTATATAGGATATAAGAT i rheMac8.chr13 C 0 T 138 s macFas5.chr13 1425177 20 - 111193037 ATGTGTTTATAGCATATAAG-- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453010 22 + 3644372 GTGTGTATATAGGATATAAGAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407407 22 - 10304083 GTGTGTatataggatataagat i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1483971 22 - 107702431 GTGTGTATATAGGATATAAGAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 973068 22 - 2200435 GTGTGTATATGGCACATAAGAT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1404567 22 - 108792865 GTGTGTATTTAGAGCATATGAT i calJac3.chr14 C 0 T 105 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405642 93 - 13651311 I a score=14668.000000 s hg38.chr2_KI270774v1_alt 140357 4 + 223625 AATA s panTro5.chr2A 1427369 4 + 111504155 AATA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376611 4 + 114371477 AATA i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1123590 4 + 81552678 agtg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452697 4 + 108979918 AGTG i rheMac8.chr13 T 138 C 0 s macFas5.chr13 1425197 4 - 111193037 AGTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453032 4 + 3644372 AGTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407429 4 - 10304083 agtg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1483993 4 - 107702431 AGTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 973090 4 - 2200435 AGTG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1404484 4 - 108792865 AGTG i calJac3.chr14 T 105 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e colAng1.NW_012118821v1 1405642 93 - 13651311 I e gorGor5.CYUI01015607v1 1401244 0 + 1464242 C a score=97349.000000 s hg38.chr2_KI270774v1_alt 140361 19 + 223625 TGCGGACATGTGTGTATAT s panTro5.chr2A 1427373 19 + 111504155 TGCGGGCATGTGTGTATAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376615 19 + 114371477 TGCGGGCATGTGTGTATAT i panPan2.chr2A C 0 T 92 s nomLeu3.chr19 1123594 19 + 81552678 tgtgggcatgtgggtatat i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452701 19 + 108979918 TGTGAGCATGTGTGTATGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425201 19 - 111193037 TGTGGGCATGTGTGTATAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453036 19 + 3644372 TGTGAGCATGTGTGTATGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407433 19 - 10304083 tgtgggcatgtgtgtatat i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1483997 19 - 107702431 TGTGAGCATGTGTGTATGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 973094 19 - 2200435 TGTGGGCATGTGTGTATAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405735 19 - 13651311 TGTGGGCATGTGTGTATAT i colAng1.NW_012118821v1 I 93 C 0 s calJac3.chr14 1404488 19 - 108792865 TGTGACCATGTGTGTTTAA i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e gorGor5.CYUI01015607v1 1401244 0 + 1464242 C a score=53807.000000 s hg38.chr2_KI270774v1_alt 140380 13 + 223625 AGCATATAAGACA s panTro5.chr2A 1427392 13 + 111504155 AGCATATAAGACA i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401244 13 + 1464242 AGCTTATAAGACA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123613 13 + 81552678 aggatataagaca i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452720 13 + 108979918 GGCATATAAGATA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425220 13 - 111193037 ATCGTATAAGATA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453055 13 + 3644372 GGCATATAAGATA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407452 13 - 10304083 aggatataagata i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1484016 13 - 107702431 GGCATATAAGATA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 973113 13 - 2200435 AGCATATAAGACA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405754 13 - 13651311 AGCATATAAGACA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404507 13 - 108792865 TGCATTTATAATA i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e panPan2.chr2A 1376634 92 + 114371477 T a score=7002.000000 s hg38.chr2_KI270774v1_alt 140393 2 + 223625 GT s panTro5.chr2A 1427405 2 + 111504155 GT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376542 2 + 114371477 GT i panPan2.chr2A T 92 C 0 s gorGor5.CYUI01015607v1 1401257 2 + 1464242 GT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123626 2 + 81552678 gt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452733 2 + 108979918 CT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425233 2 - 111193037 CT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453068 2 + 3644372 CT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407465 2 - 10304083 GT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1484029 2 - 107702431 GT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 973126 2 - 2200435 GT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405767 2 - 13651311 GT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404520 2 - 108792865 AT i calJac3.chr14 C 0 T 173 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=-5800.000000 s hg38.chr2_KI270774v1_alt 140395 1 + 223625 -T s panTro5.chr2A 1427407 1 + 111504155 -T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376544 1 + 114371477 -G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401259 1 + 1464242 -T i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123628 1 + 81552678 -a i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452735 1 + 108979918 -G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425235 1 - 111193037 -G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453070 1 + 3644372 -G i macNem1.NW_012011978v1 C 0 I 68 s cerAty1.NW_012000820v1 1407467 1 - 10304083 -G i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1484031 1 - 107702431 -G i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 973128 1 - 2200435 -G i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405769 1 - 13651311 -G i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404349 1 - 108792865 T- i calJac3.chr14 T 173 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=183189.000000 s hg38.chr2_KI270774v1_alt 140396 29 + 223625 TGTGGGCACATGTGTATATGGCATATAAG s panTro5.chr2A 1427408 29 + 111504155 TGTGGGCACATGTGTATATGGCATATAAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376545 29 + 114371477 TGTGGGCACGTGTGTATATAGCATATAAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401260 29 + 1464242 TGTGGGCACATGTATATATGGCATATAAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123629 29 + 81552678 tgtgggcatatgtgtatatagcatataag i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452736 29 + 108979918 TGTGGGCACATGTGTTTATAGCATATAAG i rheMac8.chr13 C 0 I 70 s macFas5.chr13 1425236 29 - 111193037 TGTGGGCACGTGTGTATATAGGATATAAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453139 29 + 3644372 TGTGGGCACGTGTGTATATAGGATATAAG i macNem1.NW_012011978v1 I 68 C 0 s cerAty1.NW_012000820v1 1407468 29 - 10304083 TGTGAGCATGTGTGTATGTGGCATATAAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1484032 29 - 107702431 TGTGGGCACGTGTGTATATAGGATATAAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 973129 29 - 2200435 TGTGGGCATGTGTGTATATGGCATATAAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405770 29 - 13651311 TGTGGGCACATGTGTATATGGCATATAAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404350 29 - 108792865 TGTGGGCACATGTGTATATGGCATATATG i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=4996.000000 s hg38.chr2_KI270774v1_alt 140425 2 + 223625 AC s panTro5.chr2A 1427437 2 + 111504155 AC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376574 2 + 114371477 AC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401289 2 + 1464242 AC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123658 2 + 81552678 aC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1425265 2 - 111193037 AT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453168 2 + 3644372 AG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407497 2 - 10304083 AT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1484061 2 - 107702431 AT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 973158 2 - 2200435 AC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405799 2 - 13651311 AG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404379 2 - 108792865 AT i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e rheMac8.chr13 1452765 70 + 108979918 I a score=125151.000000 s hg38.chr2_KI270774v1_alt 140427 23 + 223625 AGTTTGTGGACATGTGTGTATAT s panTro5.chr2A 1427439 23 + 111504155 AGTTTGTGGACATGTGTGTATAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376576 23 + 114371477 AGTGTGTGGACACATGTGTATAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401291 23 + 1464242 AATTTGTGGACATGTGTGTATAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123660 23 + 81552678 AGTTTGTATGCACATGTGTATAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452835 23 + 108979918 AGTGTGTGGGCACGTGTGTATAT i rheMac8.chr13 I 70 C 0 s macFas5.chr13 1425267 23 - 111193037 AGTGTGTGGGCACGTGTGTATAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453170 23 + 3644372 AGTGTGTGGGCACGTGTGTATAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407499 23 - 10304083 ACTGTGTGGGCACATGTGTTTAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1484063 23 - 107702431 AGTGTGTGGGCACGTGTGTATAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 973160 23 - 2200435 AGTTTGTGGACTTGTATGTATAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405801 23 - 13651311 AGTTTGTGGACTTGTGTGTATAT i colAng1.NW_012118821v1 C 0 T 242 s calJac3.chr14 1404381 23 - 108792865 ACTATGTGGGCTCGTGTGTATAT i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=45426.000000 s hg38.chr2_KI270774v1_alt 140450 9 + 223625 GGCATATAA s panTro5.chr2A 1427462 9 + 111504155 GGCATATAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376599 9 + 114371477 AGTATATAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401314 9 + 1464242 GGCATATAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123683 9 + 81552678 GGCGTATAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452858 9 + 108979918 GGCACACAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425290 9 - 111193037 GGCACACAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453193 9 + 3644372 GGTACACAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407522 9 - 10304083 AGCATATAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1484086 9 - 107702431 AGGATATAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 973183 9 - 2200435 GGCATATAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405582 9 - 13651311 GGCATATAA i colAng1.NW_012118821v1 T 242 C 0 s calJac3.chr14 1404404 9 - 108792865 GGCATATAT i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245016 0 - 7082604 C e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=156359.000000 s hg38.chr2_KI270774v1_alt 140459 26 + 223625 GATAGTGTGTGGACATGTGTGTATAT s panTro5.chr2A 1427471 26 + 111504155 GATAGTGTGTGGACATGTGTGTATAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376608 26 + 114371477 GATAATATGCGGGCATGTGTGTATAT i panPan2.chr2A C 0 I 16 s gorGor5.CYUI01015607v1 1401323 26 + 1464242 GATAGTGTGTGGACATGTGTGTATAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123692 26 + 81552678 GACAGTTTGTGGACATGTGTGTATAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452867 24 + 108979918 AATAGTGTGTGGGCA--TGTGTATAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425299 24 - 111193037 AATAGTGTGTGGGCA--TGTGTATAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453202 24 + 3644372 AATAGTGTGTGGGCA--TGTGTATAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407531 24 - 10304083 G--AGTGTGTGGGCATGTGTGTATAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1484095 26 - 107702431 GATAGTGTGTGGGCACGTGTGTATAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 973192 26 - 2200435 GATACTGTGTGGGCACGTGTGTTTAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405591 26 - 13651311 GATAGTGTGTGGGCATGGGTGTATAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404413 26 - 108792865 GGTAGTGTGTGGGCACGTGTGTATAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1245016 26 - 7082604 GATAGTGTGTGGGCAGAtgtgtatgc i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=57872.000000 s hg38.chr2_KI270774v1_alt 140485 16 + 223625 GGCA---------------------------------TATAACATGCTG s panTro5.chr2A 1427497 16 + 111504155 GGCA---------------------------------TATAACATGCTG i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401349 16 + 1464242 GGCA---------------------------------TATAACATACTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123718 16 + 81552678 GGCA---------------------------------TATAAGATACTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452891 16 + 108979918 GGCA---------------------------------CATAAGATAGTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425323 16 - 111193037 GGCA---------------------------------CATAAGATAGTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453226 16 + 3644372 GGCA---------------------------------CATAAGATAGTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407555 16 - 10304083 ATCA---------------------------------TATAAGATACTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1484121 16 - 107702431 GGCA---------------------------------CACAAAATAGTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 973218 49 - 2200435 AGCATATAAGAGCGTGTGGGCATGTGTGTATATATCGTATAAGATAGTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405617 16 - 13651311 ATCG---------------------------------TATAAGATACTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404439 16 - 108792865 GGCA---------------------------------TATAAGATGGTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1245042 16 - 7082604 agca---------------------------------tgtatggtagtg i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e panPan2.chr2A 1376634 16 + 114371477 I a score=113187.000000 s hg38.chr2_KI270774v1_alt 140501 16 + 223625 TGTGGGCACATGTGTT s panTro5.chr2A 1427513 16 + 111504155 TGTGGGCACATGTGTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376650 16 + 114371477 TGTGGGCACATGTGTA i panPan2.chr2A I 16 C 0 s gorGor5.CYUI01015607v1 1401365 16 + 1464242 TGTGGGCACATGTGTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123734 16 + 81552678 TGTGGGCACGTGTGTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452907 16 + 108979918 TGTGGGCATGTGTGTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425339 16 - 111193037 TGTGGGCATGTGTGTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453242 16 + 3644372 TGTGGGCATGTGTGTA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407571 16 - 10304083 TGTGGGCACGTGTGTA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1484137 14 - 107702431 TGTGGGCA--TGTGTA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 973267 16 - 2200435 TGTGGGCACGTGTGTA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405633 16 - 13651311 TGTGGGCACGTGTGTA i colAng1.NW_012118821v1 C 0 I 102 s calJac3.chr14 1404455 16 - 108792865 TGTGGGCATGTGTGTA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1245058 16 - 7082604 tgtgggcacgtgtgta i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=23257.000000 s hg38.chr2_KI270774v1_alt 140517 3 + 223625 TAT s panTro5.chr2A 1427529 3 + 111504155 TAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376666 3 + 114371477 TAT i panPan2.chr2A C 0 T 35 s gorGor5.CYUI01015607v1 1401381 3 + 1464242 TAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123750 3 + 81552678 TAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452923 3 + 108979918 TAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425355 3 - 111193037 TAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453258 3 + 3644372 TAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407587 3 - 10304083 TAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1484151 3 - 107702431 TAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 973283 3 - 2200435 TAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405751 3 - 13651311 TAT i colAng1.NW_012118821v1 I 102 C 0 s calJac3.chr14 1404471 3 - 108792865 TAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1245074 3 - 7082604 cat i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=16713.000000 s hg38.chr2_KI270774v1_alt 140520 3 + 223625 AGC s panTro5.chr2A 1427532 3 + 111504155 AGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376634 3 + 114371477 AGC i panPan2.chr2A T 35 C 0 s gorGor5.CYUI01015607v1 1401384 3 + 1464242 AGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123753 3 + 81552678 AGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452926 3 + 108979918 AGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425358 3 - 111193037 AGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453261 3 + 3644372 AGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407590 3 - 10304083 AGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1484154 3 - 107702431 GGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 973286 3 - 2200435 AGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405754 3 - 13651311 AGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404474 3 - 108792865 ATC i calJac3.chr14 C 0 T 105 s saiBol1.JH378218 1245077 3 - 7082604 agc i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=55406.000000 s hg38.chr2_KI270774v1_alt 140523 8 + 223625 ATATAAGA s panTro5.chr2A 1427535 8 + 111504155 ATATAAGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376637 8 + 114371477 ATATAAGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401387 8 + 1464242 ATATAAGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123756 8 + 81552678 ATATAAGT i nomLeu3.chr19 C 0 T 140 s rheMac8.chr13 1452929 8 + 108979918 ATATAAGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425361 8 - 111193037 ATATAAGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453264 8 + 3644372 ATATAAGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407593 8 - 10304083 ATATAAGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1484157 8 - 107702431 ACATAAGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 973289 8 - 2200435 ATATAAGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405757 8 - 13651311 ATATAAGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404372 8 - 108792865 ATATATGA i calJac3.chr14 T 105 C 0 s saiBol1.JH378218 1245080 8 - 7082604 atatgaca i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=155174.000000 s hg38.chr2_KI270774v1_alt 140531 29 + 223625 CAGTTTGTGGGCACA---------------------------------TGTGTATATG--------------------------------------------------------------------GCAT s panTro5.chr2A 1427543 29 + 111504155 CAGTTTGTGGGCACA---------------------------------TGTGTATATG--------------------------------------------------------------------GCAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376645 29 + 114371477 CAGTTTGTGGGCACA---------------------------------TGTGTATATG--------------------------------------------------------------------GCAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401395 29 + 1464242 CAGTTTGTGGGCACA---------------------------------TGTGTATATG--------------------------------------------------------------------GCAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123624 29 + 81552678 cagtatgtgggcata---------------------------------tgtgtatata--------------------------------------------------------------------gcat i nomLeu3.chr19 T 140 C 0 s rheMac8.chr13 1452937 29 + 108979918 CAGTGTGTGGGCACA---------------------------------TGTGTATATG--------------------------------------------------------------------GCAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425369 29 - 111193037 CAGTGTGTGGGCACA---------------------------------TGTGTATATG--------------------------------------------------------------------GCAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453272 29 + 3644372 CAGTGTGTGGGCACA---------------------------------TGTGTATATG--------------------------------------------------------------------GCAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407601 97 - 10304083 TAGTGTGTGGGCACG---------------------------------TGTGTATATGGCATACAAAATAGTGTGTGGGCATGTGTATATGGCACATAAGATAGTGTGTGGGCATGTGTGTATATAGCAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1484165 29 - 107702431 TAGTGTGTGGGCATG---------------------------------TGTGTATATA--------------------------------------------------------------------GCAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 973297 62 - 2200435 TAGTGTGTGGGCATGTGTGTATATGGCACACAAAATAGTGTGTGGGCATGTGTATATG--------------------------------------------------------------------GCAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405765 29 - 13651311 CAGTGTGTGGGCACA---------------------------------TGTGTATATG--------------------------------------------------------------------GCAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404380 29 - 108792865 TACTATGTGGGCTCG---------------------------------TGTGTATATG--------------------------------------------------------------------GCAT i calJac3.chr14 C 0 I 68 s saiBol1.JH378218 1245088 27 - 7082604 tagtgtgtgggcacg---------------------------------tgtg--tatg--------------------------------------------------------------------gcac i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=324561.000000 s hg38.chr2_KI270774v1_alt 140560 72 + 223625 ATAAGACAGTTTGTGGACATGTGTG-----------------------------------TATATGGCATATAAGATAGTGTGTGGACATGTGTGTATATGGCATAT s panTro5.chr2A 1427572 72 + 111504155 ATAAGACAGTTTGTGGACATGTGTG-----------------------------------TATATGGCATATAAGATAGTGTGTGGACATGTGTGTATATGGCATAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376674 72 + 114371477 ATAAGACAGTTTGTGGACATGTGTG-----------------------------------TATATGGCATATAAGATAGTGTGTGGACATGTGTGTATATGGCATAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401424 72 + 1464242 ATAAGACAGTTTGTGGACATGTGTG-----------------------------------TATATGGCATATAAGATACTGTGTGGGCACGTGTGTTTATAGCGTAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123653 72 + 81552678 ataagaCAGTTTGTATGCACATGTG-----------------------------------TATATGGCGTATAAGACAGTTTGTGGACATGTGTGTATATGGCATAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1452966 46 + 108979918 ATAAGACAGTTTGTGGACTTATGTG-----------------------------------TATATGGCATATAAGATACTG-------------------------- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425398 46 - 111193037 ATAAGACAGTTTGTGGACTTGTGTG-----------------------------------TATATGGCATATAAGATACTG-------------------------- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453301 46 + 3644372 ATAAGACAGTTTGTGGACTTGTGTG-----------------------------------TATATGGCATATAAGATACTG-------------------------- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407698 72 - 10304083 ATAAGACAGTGTGTGGGCACATGTG-----------------------------------TATATGGCATATAAGACAGTTTGTGGACTTGTGTGTATATGGCATAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1484194 72 - 107702431 ATAAGACAGTGTGTGGGCACATGTG-----------------------------------TATATGGCATATAAGACAGTTTGTGGACTTGTGTGTATATGGCATAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 973359 107 - 2200435 ATAAGATAGTGTGTGGGCATGTGTGTATATAGCATATAAGACAGTGTGTGGGCACATGTGTATATGGCATATAAGACAGTTTGTGGACTTGTGTGTATATGGCATAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405794 65 - 13651311 ATAAGAGAGTTTGTGGACTTGTGTG-----------------------------------T-------ATATAAGATACTATGTGGGCATGTGTATTTATAGCATGT i colAng1.NW_012118821v1 C 0 T 35 s calJac3.chr14 1404477 72 - 108792865 ATAAGATAGTGTGTGACCATGTGTG-----------------------------------TTTAATGCATTTATAATAATGTGTGGGCGTGTGTGTATATGGCACAT i calJac3.chr14 I 68 C 0 s saiBol1.JH378218 1245115 70 - 7082604 atatgatagcctgtgggcacgtgtg-----------------------------------tatgtggcatatatgatagtgtgtag--gtgtgtgtatatggcacat i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=96938.000000 s hg38.chr2_KI270774v1_alt 140632 35 + 223625 AAGATACTGTGTGGGCACGTGTGTTTATAGCATAT s panTro5.chr2A 1427644 35 + 111504155 AAGATACTGTGTGGGCACGTGTGTTTATAGCATAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376746 35 + 114371477 AAGATACTGTGTGGGCACATGTGTTTATAGCATAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401496 4 + 1464242 AAG-------------------------------T i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123725 35 + 81552678 AAGATACTGTGTGGGCACGTGTGTTTATAGCATAT i nomLeu3.chr19 C 0 I 4 s rheMac8.chr13 1453012 26 + 108979918 ---------TGTGGGCACGTGTGTTTATAGCATGT i rheMac8.chr13 C 0 I 4 s macFas5.chr13 1425444 26 - 111193037 ---------TGTGGGCACGTGTGTTTATAGCATGT i macFas5.chr13 C 0 I 4 s macNem1.NW_012011978v1 1453347 26 + 3644372 ---------TGTGGGCACGTGTGTTTATAGCATGT i macNem1.NW_012011978v1 C 0 I 4 s cerAty1.NW_012000820v1 1407770 35 - 10304083 AAGATACTGTGTGGGCACGTGTGTTTATAGCCTGT i cerAty1.NW_012000820v1 C 0 I 4 s chlSab2.chr14 1484266 35 - 107702431 AAGATACTGTGTGGGCACATGTGTTTGTAGCATGT i chlSab2.chr14 C 0 I 4 s manLeu1.NW_012103754v1 973466 35 - 2200435 AAGATACTGTGTGGGCACGTGTGTTTATAGCATGT i manLeu1.NW_012103754v1 C 0 I 4 s colAng1.NW_012118821v1 1405824 35 - 13651311 AAGATACTATGTGGGCATGTGTATTTATAGCATGT i colAng1.NW_012118821v1 T 35 I 4 s calJac3.chr14 1404549 4 - 108792865 ----------ATGA--------------------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1245185 1 - 7082604 -------------a--------------------- i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1328074 79 + 1864846 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=186577.000000 s hg38.chr2_KI270774v1_alt 140667 23 + 223625 TAGTTTGTGGGCACGTGTGTAAA s panTro5.chr2A 1427679 23 + 111504155 TAGTTTGTGGGCACGTGTGTAAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376781 23 + 114371477 TAGTTTGTGGGCACGTGTGTAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401500 23 + 1464242 TAGTTTGTGGGCACGTGTGTAAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123764 23 + 81552678 TAGTTTGTGGGTACGTGTGTAAA i nomLeu3.chr19 I 4 C 0 s rheMac8.chr13 1453042 23 + 108979918 TAGTGTGTGGGCACGTGTGTAAA i rheMac8.chr13 I 4 C 0 s macFas5.chr13 1425474 23 - 111193037 TAGTGTGTGGGCACGTGTGTAAA i macFas5.chr13 I 4 C 0 s macNem1.NW_012011978v1 1453377 23 + 3644372 TAGTGTGTGGGCACGTGTGTAAA i macNem1.NW_012011978v1 I 4 C 0 s cerAty1.NW_012000820v1 1407809 23 - 10304083 TAGTGTGTGGGCACGTGTGTAAA i cerAty1.NW_012000820v1 I 4 C 0 s chlSab2.chr14 1484305 23 - 107702431 TAGTGTGTGGGCACGTGTGTAAA i chlSab2.chr14 I 4 C 0 s manLeu1.NW_012103754v1 973505 23 - 2200435 TAGTGTGTGGGCACGTGTGTAAA i manLeu1.NW_012103754v1 I 4 C 0 s colAng1.NW_012118821v1 1405863 23 - 13651311 TAGTGTGTGGGCACGTGTGTAAA i colAng1.NW_012118821v1 I 4 C 0 s calJac3.chr14 1404553 23 - 108792865 TGGCTTGTGGGTGTGTGTGTATT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1245186 23 - 7082604 tagcttgtgggcatgtgtgtatt i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1328153 23 + 1864846 TAGCTTGTGGGCATGTGTGTATT i cebCap1.NW_016107827v1 I 79 C 0 e aotNan1.NW_018513311v1 132605 50 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=625142.000000 s hg38.chr2_KI270774v1_alt 140690 64 + 223625 TAGAGCCTATTATCCCATGTGTACCTGCACTTTTTCTCATCCTCTGTGTCACATCATGTGCATG s panTro5.chr2A 1427702 64 + 111504155 TAGAGCCTATTATCCCATGTGTACCTGCACTTTTTCTCATCCTCTGTGTCACATCATGTGCATG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376804 64 + 114371477 TAGAGCCTATTATCCCATGTGTACCTGCACTTTTTCTCATCCTCTGTGTCACATCATGTGCATG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401523 64 + 1464242 TACAGCCTATGATCCCATGTGTACCTGCACTTTTTCTCATCCTCTGTGTCACATCATGTGCATG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123787 64 + 81552678 TAGAGCATAAGATCCCATGTGTACCTGCGCTTTTTCTCATCCTCTGTGTCACATCATGTGCATG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1453065 64 + 108979918 TAGAGCATGTGATCCCATGTGTACCTGCGCTTTTTCTCATCCTCTGTGTCACATCATGTGCATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425497 64 - 111193037 TAGAGCATGTGATCCCATGTGTACCTGCGCTTTTTCTCATCCTCTGTGTCACATCATGTGCATG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453400 64 + 3644372 TAGAGCATGTGATCCCATGTGTACCTGCGCTTTTTCTCATCCTCTGTGTCACATCATGTGCATG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407832 64 - 10304083 TAGAGCATGTGATCCCATGTGTACCTGCGCTTTTTCTCATCCTCTGTGTCATATCATGTGCATG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1484328 64 - 107702431 TAGAGCATGTGACCCCATGTGTACCTGCGCTTTTTCTCATCCTCTGTGTCACATCATGTGCATG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 973528 64 - 2200435 TAGAGCATGTGATCCCATGTGTACCTGCGCTTTTTCTCATCCTCTGTGTCACATCATGTGTATG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405886 64 - 13651311 TAGAGCATGTGATCCCATGTATACCTGCGCTTTTTCTCATCCTCTGTGTCACATCATGTGCACG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404576 64 - 108792865 TAGAGCATATGATCCCATATGTGCCTGCGCTTTTTCACATCCTCTGTGTCACACCATGTGCATG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1245209 64 - 7082604 taCAGCACATGATCTCATATGTGCCTGTGCTTTTTCACGTCCTCTGTGTCACACCGTGTGCATG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1328176 64 + 1864846 TACAGCATATGATCCCATATGTGCCTGTGCTTTTTCACGTCCTCTGTGTCACACCGTGTGCATG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 132655 64 + 287728 TAGAGCCTGTGATCCCACATGTGCCTGTGCTTTTTCATATCCTGTGTGTCACATCATGTGCATG i aotNan1.NW_018513311v1 I 50 C 0 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 943585 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I a score=141511.000000 s hg38.chr2_KI270774v1_alt 140754 13 + 223625 CTCAGTGCCTGGT s panTro5.chr2A 1427766 13 + 111504155 CTCAGTGCCTGGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376868 13 + 114371477 CTCAGTGCCTGGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401587 13 + 1464242 CTCAGTGCCTGGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123851 13 + 81552678 CTCAGTGCCTGGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1453129 13 + 108979918 CTCAGTGCCTGGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425561 13 - 111193037 CTCAGTGCCTGGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453464 13 + 3644372 CTCAGTGCCTGGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407896 13 - 10304083 CTCAGTGCCTGGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1484392 13 - 107702431 CTCAGTGCCTGGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 973592 13 - 2200435 CTCAGTGCCTGGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405950 13 - 13651311 CTCAGTGCCTGGT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1404640 13 - 108792865 CTCAGTGCCTGTT i calJac3.chr14 C 0 I 670 s saiBol1.JH378218 1245273 13 - 7082604 CTCGGTACCTGGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1328240 13 + 1864846 CTCAGCACCTGGT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 132719 13 + 287728 CCCAGTACCTGGA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 943585 13 + 5252280 ctctatgcctggt i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e dasNov3.JH576208 1743018 876 + 4416731 I a score=42764.000000 s hg38.chr2_KI270774v1_alt 140767 5 + 223625 -AAGGA s panTro5.chr2A 1427779 5 + 111504155 -AAGGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376881 5 + 114371477 -AAGGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401600 5 + 1464242 -AAGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1123864 5 + 81552678 -AAGGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1453142 5 + 108979918 -AAGGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425574 5 - 111193037 -AAGGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453477 5 + 3644372 -AAGGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407909 5 - 10304083 -AAGGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1484405 5 - 107702431 -AAGGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 973605 5 - 2200435 -AAGGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405963 5 - 13651311 -AAGGA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1245286 5 - 7082604 -AAGGA i saiBol1.JH378218 C 0 I 56 s cebCap1.NW_016107827v1 1328253 5 + 1864846 -AAGGA i cebCap1.NW_016107827v1 C 0 I 84 s aotNan1.NW_018513311v1 132732 5 + 287728 -ACGGA i aotNan1.NW_018513311v1 C 0 I 56 s otoGar3.GL873658 943598 5 + 5252280 aacgg- i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e dasNov3.JH576208 1743018 876 + 4416731 I e calJac3.chr14 1404653 670 - 108792865 I a score=2473017.000000 s hg38.chr2_KI270774v1_alt 140772 254 + 223625 CCACTTAGCAATAGTTCTTATACATGTCTGCTTAACATTAAGTGAACAGAAATG-TAAttgtttacaa---cttagtattccatttgtgtgtgcattataatctatctaaccactttccctattaatga-gcatgagttgccttctgcttcattgctgtttttatgctgtcacaaataatgaagcaaagagcacactt-ggccctcaatctttgtgcccatgtgcacacctga------tagatccaggggtaagattgctaagtc s panTro5.chr2A 1427784 254 + 111504155 CCACTTAGCAATAGTTCTTATACATGTCTGCTTAACATTAAGTGAACAGAAATG-TAAttgtttacaa---cttagtattccatttgtgtgtgcattataatctatctaaccactttccctattaatga-gcatgagttgccttctgcttcattgctgtttttatgctgtcacaaataatgaaggaaagagcacactt-ggccctcaatctttgtgcccatgtgcacacctga------tagatccaggggtaagattgctaagtc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1376886 254 + 114371477 CCACTTAGCAATAGTTCTTATACATGTCTGCTTAACATTAAGTGAACAGAAATG-TAAttgtttacaa---cttagtattccatttgtgtgtgcattataatctatctaaccactttccctattaatga-gcgtgagttgccttctgcttcattgctgtttttatgctgtcacaaataatgaagcaaagagcacactt-ggccctcaatctttgtgcccatgtgcacacctga------tagatccaggggtaagattgctaagtc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401605 257 + 1464242 CCACTTAGCAATAGTTCTTATTCATGTCTGCTTAACATTAAGTGAACAGaaatg-taattgtttatgacttcttaatattccatttgtgtgtgcattataatctatctaaccactttccttattaatga-gcatgagttgctttctgcttcattgctgtttttatgctgtcacaaataatgaggcaaagagcacactt-ggccctcaatctttgtgcccatgtgcacacgtga------tggatccaggggtaagattgctaagtc i gorGor5.CYUI01015607v1 C 0 I 5 s nomLeu3.chr19 1123869 258 + 81552678 CCACTTAGCAATAGTTCTTACACATATCTGCATAACATTAAGTGAACAGAAACG-TAAttgtttatgacttcttaatatttcatttgtgtgtgcattataatctatctaaccacttcccttattaatga-gcatgagttgctttctgcttcattgctgtttttatgctgtcacaaataatgaagcaaagagcacacttgggcccccagtctttgtgcccatgtgcacacccga------tggatccaggggtaagattgctaagtc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1453147 258 + 108979918 Ccacttagcaatagttcttacacatgtctgcataacattaagtgaacagaaatgttaattgtttgtgacttcttaatattccatttgtgtgtgcattataatctgtctaaccacttcccttattaatga-gcatgagttgctttctgcttcattgctgtttttatgctgtcacaaataatgaagcaaagagcacactt-ggccctcagtctttgtgcacatgtgtacacctga------tggatccaggggtaagattgctaagtc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425579 258 - 111193037 CCACTTAGCAATAGTTCTTACACATGTCTGCATAACATTAAGTGAACAGAAATGTTAAttgtttgtgacttcttaatattccatttgtgtgtgcattataatctgtctaaccacttcccttattaatga-gcatgagttgctttctgcttcattgctgtttttatgctgtcacaaataatgaagcaaagagcacactt-ggccctcagtctttgtgcacatgtgtacacctga------tggatccaggggtaagattgctaagtc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453482 258 + 3644372 Ccacttagcaatagttcttacacatgtctgcataacattaagtgaacagaaatgttaattgtttgtgacttcttaatattccatttgtgtgtgcattataatctgtctaaccacttcccttattaatga-gcatgagttgctttctgcttcattgctgtttttatgctgtcacaaacaatgaagcaaagagcacactt-ggccctcagtctttgtgcacatgtgcacacctga------tggatccaggggtaagattgctaagtc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1407914 258 - 10304083 Ccacttagcaatagttcttacacatgtctgcataacattaagtgaacagaaatgttaattgtttgtgacttcttaatattccatttgtgtgtgcattataatctgtctaaccacttcccttattaatga-gcatgagttgctttctgcttcattgctgtttttatgctgtcacaaataatgaagcaaagagcacactt-ggccctcagtctttgtgcacatgtgtacacctga------tggatccaggggtaagattgctaagtc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1484410 258 - 107702431 Ccacttagcaatagttcttatacatgtctgcataacattaagtgaacagaaatgttaattgtttgtgacttcttaatattccatttgtgtgtgcattataatctgtctaaccacttcccttattaatga-gcgtgagttgctttctgcttcattgctgtttttatgctgtcacaaatagtgaagcaaagagcacactt-ggccctcagtctttgtgcacatgtgtacacctga------tggatccaggggtaagactgcaaagtc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 973610 258 - 2200435 Ccacttagcaatagttcttacacatgtctgcataacattaagtgaacagaaatgttcattgtttgtgacttcttaatattccatttgtgtgtgcattataatctgtctaaccacttcccttattaatga-gcatgagttgctttctgcttcattgctgtttttatgctgtcacaaataatgaagcaaagagcacactt-ggccctcagtctttgtgcacatgtgtacacctga------tggatccaggggtaagattgctaagtc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1405968 258 - 13651311 Ccactcagcaatagttcttatacatgtctgcatagcattaagtgaacagaaatgttgattgtttgtgacttcttaatattccatttgtgtgtgcattgtaatctgtctaaccacgtcccttattaatga-gcatgagttgctttctgcttcgttgctgtttttatgctgtcacaaataatgaagcaaagagcacacgt-ggccctcagtctttgtgcacatgtgtacacctgg------tggatccaggggtaagattgctaagtc i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1405323 255 - 108792865 CCACTTAGCAATGGTTCTTATACATGTCTGCATAACATGAAGTGAACAGAAATG-CAATCAtttataatttcctactattccatttgtgtgtgcattataatctatctaaccacttctcttattaatga-gcatgagttgctttctgcttggctgctgtttttatcctgtcacaaataatgaagcagagagcacacct-gaccctcagactttgcgcatgtgtgcacaccgga------t-gaccta-gggtaagattgctaagtc i calJac3.chr14 I 670 C 0 s saiBol1.JH378218 1245347 260 - 7082604 CCGCTTAGCAATAATTCTTATGCATGTCTACATAACATGAAGTGAACAGAAATG-CAATCGTTTGTAATTTCTtaatattccatttgtgtgtgcattatactctatctaaccacttctcttgttaacga-gcctgagttgcgttctgcctggctcctg-cttcatcctgtcacaagtaatgaagcagagagcacacct-gtcccttggtctttgcacatgtgcgcacacctgatgatctt-gatcta-gggtaagattgctaagtc i saiBol1.JH378218 I 56 C 0 s cebCap1.NW_016107827v1 1328342 254 + 1864846 CCACTCAGCAGTGGTTCTTATGCATGTCTACACAACATGAAGTGAACAGAAATG-CAATCGTTTATAATTTCTCaatattccgtttgtgtgtgcattataatctatctcaccacttctcttattaatga-gcctgagttgccttctgcttggttgctg-tttcatcctgtcacaagtaatgaggcagagagcacactt-ggccctcagtctttgcacacgtgtgcatacctga------t-gatcta-gtgtaagatcattaagtc i cebCap1.NW_016107827v1 I 84 C 0 s aotNan1.NW_018513311v1 132793 254 + 287728 CCGCTTAGCGGTGGTTCTTATTCATGTCTGCACAACATGAAGTGAACAGAAATG-CAATCGtttataatttcttaatatgccattt-tgtgtgcattataatccatctaaccacttctcttattaatga-gcgtgagttgctttctgcttggttgctgttttcatgctgtcacaaataatgaagcagagagcacactt-ggccctcagtgtttgggcccgcgtgcacacctga------t-gatcca-gggtgggattgctgagtc i aotNan1.NW_018513311v1 I 56 C 0 s otoGar3.GL873658 943603 241 + 5252280 tcacttagcaataattctaatacttctctccatatcattaaatgggaaacagt--cacctgttt------tatgactattctgtaaatgtacacagtggaatttat-tacccagttcacttactggtgacatttaagttgtcggcagctctgtggctgttgctatgcggtcgcagacaaggaggcaggaagcacacac-tggaccgagtctctgtgcagacactgac-tctga------g--------gggtgaagctactgactt i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e dasNov3.JH576208 1743018 876 + 4416731 I a score=891057.000000 s hg38.chr2_KI270774v1_alt 141026 104 + 223625 acggtggaggtgcctgtggaattttgataaatattgcagaattactctccattaatattgcacaaatgttc-actcttaccag-aaaagaaagagaCAATATAGGT s panTro5.chr2A 1428038 104 + 111504155 acggtggaggtgcctgtggaattttgataaatattgcagaattactctccattaatattgcacaaatgttc-actcttaccag-aaaagaaagagaCAATATAGGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1377140 104 + 114371477 atggtggaggtgcctgtggaattttgataaatattgcagaattactctccattaatattgcacaaatgttc-actcttaccag-aaaagaaagagaCAATATAGGT i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1124127 104 + 81552678 acggtggaggtgcctgtggaattttgataaatattgcaagattactctccattattattgcacaaatattc-actcttaccag-aaaagaaagagaCCATATAGGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1453405 104 + 108979918 atggtggaggtgcctgtggaattttgataaatattgcagaattactctccattaatattgcacaaatgttc-actcttaccCA-AAAAGAAAGAGACAATATAGGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425837 104 - 111193037 atggtggaggtgcctgtggaattttgataaatattgcagaattactctccattaatattgcacaaatgttc-actcttacccg-aaaagaaagagaCAATATAGGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453740 104 + 3644372 atggtggaggtgcctgtggaattttgataaatattgcagaattactctccattaatattgcacaaatgttc-actcttacccg-aaaagaaagagaCAATATAGGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1408172 104 - 10304083 acggtggaggtgcctgtggaattttgataaatattgcagaattactctccattaatattgcacaaatgttc-actcttaccag-aaaagaaagagaCAATATAGGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1484668 104 - 107702431 acggtggaggtgcctgtggaattttgataaatattgcagaattactctccattaatattgcacaaatgttc-actcttaccag-aaaagaaagagaCAATATAGGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 973868 104 - 2200435 acggtggaggtgcatgtggaattttgataaatattgcagaattactctccattaatattgcacaaatgttc-actcttaccag-aaaagaaagagaCAATATAGGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1406226 89 - 13651311 ac---------------ggaattttgataactattgcagaattactctccattaatattgcacaaatgttc-actcttaccag-aaaagaaagagaCAATATAGGT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1405578 101 - 108792865 acagtagaggtgcaggggggagtttgatagagattgcagacatactctccattaatgttgcacaaatgttc-actcttaccag-aaaGGAAAG-GACA--ACAGGT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1245607 103 - 7082604 acagtggaggtgcaggtgggagtttgatagagattgtagacatactctccgttaatgttgcataaatgttc-gctcttaccag-aaaAGAAAG-GACAATACAggt i saiBol1.JH378218 C 0 I 474 s cebCap1.NW_016107827v1 1328596 103 + 1864846 acagtggaggtgcaggtgggagtttgatagagattgcagacatactctccattaatgttgcacaaatgttc-gctcttaccag-aaaAGAAAG-GACAATACAGGT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 133047 104 + 287728 acagtggaggtgcaggtgggagtttgatagagattgcagacgtactctccattaatgttgcacaaatgttcagctcttactgg-aaaAGAAAG-GACAATACAGGC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 943844 104 + 5252280 gcag-agaggtgcttgtgggattttgatagctatcgcagaatttctctctattaatattatactgacgctc-acttttataagcaaAAACAAGAGACACCACCAGT i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e dasNov3.JH576208 1743018 876 + 4416731 I e gorGor5.CYUI01015607v1 1401862 5 + 1464242 I a score=277724.000000 s hg38.chr2_KI270774v1_alt 141130 41 + 223625 -AGATTTTTAATTTTACTTCTCTCTGGAAACCAGCCTTGAAG s panTro5.chr2A 1428142 41 + 111504155 -AGATTTTTAATTTTACTTCTCTCTGGAAACCAGCCTTGAAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1377244 41 + 114371477 -AGATTTTTAATTTTACTTCTCTCTGGAAACCAGCCTTGAAG i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1124231 41 + 81552678 -AGATTTTTAATTTTACTTCTCTCTGGAAACCAGCCTTGAGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1453509 41 + 108979918 -AGGATTTTAATTTTATTTCTCTCTGGAAGCCAACCTTGAAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425941 41 - 111193037 -AGGATTTTAATTTTATTTCTCTCTGGAAGCCAGCCTTGAAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453844 41 + 3644372 -AGGATTTTAATTTTATTTCTCTCTGGAAGCCAGCCTTGAAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1408276 41 - 10304083 -AGGATTTTAATTTTATTTCTCTCTGGAAGCCAGCCTTGAAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1484772 41 - 107702431 -AGGTTTTTAATTTTATTTCTCTCTGGAAGCCAGCCTTGAAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 973972 41 - 2200435 -AGGATTTTAATTTTATTTCTCTCTGGAAGCCAGCCTTGAAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1406315 41 - 13651311 -AGGCTTTTAATTTTACTTCTGTCTGGAAGCCAGCCTTGAAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1405679 39 - 108792865 -AGGATTTTAA--TTACTTCTCTCTGGAAACCAGCCTTGAAG i calJac3.chr14 C 0 I 1 s cebCap1.NW_016107827v1 1328699 39 + 1864846 -AGGATTTTAA--TTACTTCTCTCTGGAAACCAGCCTTGAAG i cebCap1.NW_016107827v1 C 0 I 5 s aotNan1.NW_018513311v1 133151 34 + 287728 -AGGATTTTAA--TTACTTCTCTCTGG-----AGCCTTGAAG i aotNan1.NW_018513311v1 C 0 I 1 s otoGar3.GL873658 943948 18 + 5252280 AGGGCTTTTAA--TCACTTC---------------------- i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e dasNov3.JH576208 1743018 876 + 4416731 I e gorGor5.CYUI01015607v1 1401862 5 + 1464242 I a score=11443.000000 s hg38.chr2_KI270774v1_alt 141171 2 + 223625 TT s panTro5.chr2A 1428183 2 + 111504155 TT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1377285 2 + 114371477 TT i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1124272 2 + 81552678 TT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1453550 2 + 108979918 TT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425982 2 - 111193037 TT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453885 2 + 3644372 TT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1408317 2 - 10304083 TT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1484813 2 - 107702431 TT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 974013 2 - 2200435 TT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1406356 2 - 13651311 TT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1405719 1 - 108792865 -T i calJac3.chr14 I 1 C 0 s aotNan1.NW_018513311v1 133186 1 + 287728 -T i aotNan1.NW_018513311v1 I 1 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1328738 5 + 1864846 I e otoGar3.GL873658 943966 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e gorGor5.CYUI01015607v1 1401862 5 + 1464242 I a score=119388.000000 s hg38.chr2_KI270774v1_alt 141173 32 + 223625 AACAAGGGACAttttcttt-------------------ttttttttt--------aaga s panTro5.chr2A 1428185 33 + 111504155 AACAAGGGACAttttcttt-------------------ttttttttt-------taaga i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1377287 32 + 114371477 AACAAGGGACAttttcttt-------------------ttttttttt--------aaga i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1124274 34 + 81552678 AACAAGGGACAttttcttt-------------------ttttttttt------ttaaga i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1453552 58 + 108979918 AACAAGGGACATTTTCTTTATTTTCttttttcttttttttttttttt-ttttttaaaga i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1425984 58 - 111193037 AACAAGGGACATTTTCTTTAttttcttttttcttttctttttttttt-ttttttaaaga i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453887 51 + 3644372 AACAAGGGACATTTTCTttcttttcttttttcttttttttttttttt--------aaga i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1408319 59 - 10304083 AACAAGGGACATTTTCTTTATTTTCttttttctttcttttttctttttttttttaaaga i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1484815 58 - 107702431 AACAAGGGACAttttctttattttcttttttcttttttctttttttt-ttttttaaaga i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 974015 56 - 2200435 AACAAGGGACATTTTCTTTATtttcttttttctttct--tttttctt-ttttttaaaga i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1406358 55 - 13651311 AACAAGGGACATTTTCTTTATtttatttttcttttcttttttttttt----tttaaaga i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 943966 7 + 5252280 ---------------------------------------------------TTTAAAA- i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 133187 0 + 287728 C e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1328738 5 + 1864846 I e dasNov3.JH576208 1743018 876 + 4416731 I e calJac3.chr14 1405720 0 - 108792865 C e gorGor5.CYUI01015607v1 1401862 5 + 1464242 I a score=469642.000000 s hg38.chr2_KI270774v1_alt 141205 104 + 223625 cag-ggtctcacccag-tcgcccaggctggagtgcagtggtgcaatctcggctcactgcaacctccgcctcccgggttcaagcaatacttctgcctcagcctccct s panTro5.chr2A 1428218 104 + 111504155 cag-ggtctcacccag-tcgcccaggctggagtgcagtggtgcaatctcggcccactgcaacctccgcctcccgggttcaagcaatacttctgcctcagcctccct i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1377319 104 + 114371477 cag-ggtctcacccag-tcgcccaggctggagtgcagtggtgcaatctcggctcactgcaacctccgcctcccgggttcaagcaatacttctgcctcagcctccct i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1124308 104 + 81552678 cag-ggtctcactcag-tcacccaggcttgtatgcagtggtgcaatctcggctcactgcaacctccgcctcccaggttcaagcaattcttctgcctcagcctccct i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1453610 104 + 108979918 tag-ggtctcattcag-tcactcaggctggagtgcagtggtacaatctcagctcactgcaacctctgcctcccaggttcaagtaattcttctgccttagcctcccg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1426042 104 - 111193037 tag-ggtctcattcag-tcactcaggctggagtgcagtggtacaatctcagctcactgcaacctctgcctcccaggttcaagtgattcttctgccttagcctcccg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1453938 104 + 3644372 tag-ggtctcattcag-tcactcaggctggagtgcagtggtacaatctcagctcactgcaacctctgcctcccaggttcaagtaattcttctgccttagcctcccg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1408378 105 - 10304083 tagcggtctcattcagctcactcaggctggagtgcagtggtgcaatctcagctcactgcaacctctgcctcccaggttcaagt-attcttctgccttagcctcccg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1484873 104 - 107702431 tag-ggtctcattcag-tcactcaggctggagtgcagtggtgcaatctcagctcactgcaacctctgcctccccggttcaagtagttcttctgccttagccgccca i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 974071 104 - 2200435 tag-ggtctcattcag-tcactcaggctggagtgcagtggtgcaatctcagctcactgcaacctctgcctcccaggttcaagtaattcttctgccttagcctcccg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1406413 104 - 13651311 tag-ggtctcattcag-tcactcaggctggagtgcagtggtataatctcagctcactgcaacctctacctcccaggttcaagtaattcttctgccttagcttcccg i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 133187 0 + 287728 C e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1328738 5 + 1864846 I e otoGar3.GL873658 943973 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e calJac3.chr14 1405720 0 - 108792865 C e gorGor5.CYUI01015607v1 1401862 5 + 1464242 I a score=60841.000000 s hg38.chr2_KI270774v1_alt 141309 11 + 223625 agtagctggga s panTro5.chr2A 1428322 11 + 111504155 agtagctggga i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1377423 11 + 114371477 agtagctggga i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1124412 11 + 81552678 agtagctggga i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1453714 11 + 108979918 ggtagctggga i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1426146 11 - 111193037 ggtagctggga i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1454042 11 + 3644372 ggtagctggga i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1408483 11 - 10304083 ggtagctggga i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1484977 11 - 107702431 ggtagctggga i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 974175 11 - 2200435 ggtagctggga i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1406517 11 - 13651311 ggtagctggga i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 943973 11 + 5252280 AGTAGCTTTGA i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 133187 0 + 287728 C e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1328738 5 + 1864846 I e dasNov3.JH576208 1743018 876 + 4416731 I e calJac3.chr14 1405720 0 - 108792865 C e gorGor5.CYUI01015607v1 1401862 5 + 1464242 I a score=400897.000000 s hg38.chr2_KI270774v1_alt 141320 85 + 223625 ctacaggc-aggtgccaccacacccggctaatttttgtatttttagtagagacggggtgtcaccatgttggccaggctggtctcga s panTro5.chr2A 1428333 85 + 111504155 ctacaggc-aggtgccaccacacctggctaatttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcga i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1377434 85 + 114371477 ctacaggc-aggtgccaccacacctggctaatttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcga i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1124423 85 + 81552678 ctacaggc-gggcgccaccacacctggctaatttttgtatttttagtagagacggggtttcaccatattggccgtgctggtctcga i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1453725 85 + 108979918 ctacaggt-gcatgccaccacacctggctaatttttgtatttttagtagagacggggtttcaccatattggccaggctggtctcga i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1426157 85 - 111193037 ctacaggt-gcatgccaccacacctggctaatttttgtatttttagtagagacggggtttcaccatattggccaggctggtctcga i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1454053 85 + 3644372 ctacaggt-gcatgccaccacacctggctaatttttgtatttttagtagagacggggtttcaccatattggccaggctggtctcga i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1408494 85 - 10304083 ctacaggtggcacg-caccacacctggctaatttttgtatttttagtagagacggggtttcaccatattggccaggctggtctcga i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1484988 85 - 107702431 ctacaggt-gcacgccaccacacctggctaatttttgtatttttagtagagacggggtttcaccatattggccaggctggtctcga i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 974186 85 - 2200435 ctacaggt-gcacgccaccacacctggctaatttttgtatttttagtagagacggggtttcaccatattggccaggctggtctcga i manLeu1.NW_012103754v1 C 0 T 4709 s colAng1.NW_012118821v1 1406528 85 - 13651311 ctacaggt-gcaccccaccacacctggctaatttttgtatttttagtagagatggggtttcaccatattggccaggctggtctcga i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 133187 0 + 287728 C e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1328738 5 + 1864846 I e otoGar3.GL873658 943984 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e calJac3.chr14 1405720 0 - 108792865 C e gorGor5.CYUI01015607v1 1401862 5 + 1464242 I a score=319452.000000 s hg38.chr2_KI270774v1_alt 141405 72 + 223625 actcctga-ccttgggatccgcc-tgccttgg--cctctcaaagtgctgggattacaggtgtgagccaccgtgctc s panTro5.chr2A 1428418 72 + 111504155 actcctga-ccttgggatccgcc-tgccttgg--cctctcaaagtgctgggattacaggtgtgagccaccgtgctc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1377519 72 + 114371477 actcctga-ccttgggatccgcc-tgccttgg--cctctcaaagtgctgggattacaggtgtgagccaccgtgctc i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1124508 72 + 81552678 gctcctga-ccttgggatccgcc-tgcctcag--cctccaaaagtgctgggattacaggcgtgagccaccgtgctc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1453810 72 + 108979918 actcctga-ccttgtgatccacc-tgcctcag--cctcccaaagtgctgggattacaggtgtgaggcaccgtgctc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1426242 72 - 111193037 actcctga-ccttgtgatccacc-tgcctcag--cctcccaaagtgctgggattacaggtgtgaggcaccgtgctc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1454138 74 + 3644372 actcctgacccttgtgatccaccgtgcctccagccctcccaaagtgctggg--ttcaggtgtgaggcaccgtgctc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1408579 72 - 10304083 actcctga-ccttgtgatccacc-tgcctcag--cctcccaaagtgctgggattacaggtgtgaggcaccgtgctc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1485073 72 - 107702431 actcctga-ccttgtgatccacc-tgcttcag--cctcccaaagtgctgggattacaggtgtgagccaccgtgctc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 969562 72 - 2200435 actcctga-ccttgtgatccacc-tgtctcag--cctcccaaagtgctgggattacaggtgtgaggcaccgtgctc i manLeu1.NW_012103754v1 T 4709 C 0 s colAng1.NW_012118821v1 1406613 72 - 13651311 actcctga-ccttgtgatctacc-tgcctcag--cctcccacagtgctgggattacaggtatgagccaccgtgctc i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 133187 0 + 287728 C e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1328738 5 + 1864846 I e otoGar3.GL873658 943984 0 + 5252280 C e dasNov3.JH576208 1743018 876 + 4416731 I e calJac3.chr14 1405720 0 - 108792865 C e gorGor5.CYUI01015607v1 1401862 5 + 1464242 I a score=26541.000000 s hg38.chr2_KI270774v1_alt 141477 4 + 223625 agcc s panTro5.chr2A 1428490 4 + 111504155 agcc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1377591 4 + 114371477 agcc i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1124580 4 + 81552678 agcc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1453882 4 + 108979918 agcc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1426314 4 - 111193037 agcc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1454212 4 + 3644372 agcc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1408651 4 - 10304083 agcc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1485145 4 - 107702431 agcc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 969634 4 - 2200435 agcT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1406685 4 - 13651311 agcc i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 943984 4 + 5252280 AGCT i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1743894 4 + 4416731 AGCT i dasNov3.JH576208 I 876 C 0 e aotNan1.NW_018513311v1 133187 0 + 287728 C e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1328738 5 + 1864846 I e calJac3.chr14 1405720 0 - 108792865 C e gorGor5.CYUI01015607v1 1401862 5 + 1464242 I a score=20248.000000 s hg38.chr2_KI270774v1_alt 141481 3 + 223625 AAC s panTro5.chr2A 1428494 3 + 111504155 AAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1377595 3 + 114371477 AAC i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1124584 3 + 81552678 AAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1453886 3 + 108979918 AAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1426318 3 - 111193037 AAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1454216 3 + 3644372 AAC i macNem1.NW_012011978v1 C 0 I 1 s cerAty1.NW_012000820v1 1408655 3 - 10304083 AAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1485149 3 - 107702431 AAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 969638 3 - 2200435 AAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1406689 3 - 13651311 AGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1405720 3 - 108792865 AAC i calJac3.chr14 C 0 C 0 s aotNan1.NW_018513311v1 133187 3 + 287728 AAC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 943988 3 + 5252280 GGC i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1743898 3 + 4416731 GGT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1328738 5 + 1864846 I e gorGor5.CYUI01015607v1 1401862 5 + 1464242 I a score=1141621.000000 s hg38.chr2_KI270774v1_alt 141484 147 + 223625 AAGGGACATTTTCTACTTAAGAGCACAGATGGTTTCGATCTCA--TGTCCTCTCTAAcattca--ttcagtaaaacttcactg-gcagttattctgtgccatgctgtgctgtgtgctaggcaggctgaaaaggaagaca--ggctggtccctgg s panTro5.chr2A 1428497 147 + 111504155 AAGGGACATTTTCTACTTAAGAGTACAGATGGTTTCGATCTCA--TGTCCTCTCTAAcattca--ttcaataaaacttcactg-gcagttattctgtgccatgctgtgctgtgtgctaggcaggctgaaaaggaagaca--ggctggtccctgG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1377598 147 + 114371477 AAGGGACATTTTCTACTTAAGAGCACAGATGGTTTCGATCTCA--TGTCCTCTCTAAcattca--ttcaataaaacttcactg-gcagttattctgtgccatgctgtgctgtgtgctaggcaggctgaaaaggaagaca--ggctggtccctgg i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1124587 147 + 81552678 AAGGGACATTTTCTACTTAAGAGCACAGATGGTTTTGGTCTCA--TGTCCTCTCTAAcattca--tccaataaaacttcactg-gcagttattctgtgccatgctgtgctgtgtgctgggcaggctgaaaaggaagaca--ggctggtccctgG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1453889 147 + 108979918 AAGGGACATTTTCTACTTAAGAGCACAGGTGGTTTCAGGCTCA--TGTCCTCTCTAAcattca--ttcaataaaacttcactg-gtagttattctgtgccatgctgtgctgtgtgctgggcagactgaaaaggaagaca--ggctggtccctgg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1426321 147 - 111193037 AAGGGACATTTTCTACTTAAGAGCACAGGTGGTTTCAGGCTCA--TGTCCTCTCTAAcattca--ttcaataaaacttcactg-gtagttattctgtgccatgctgtgctgtgtgctgggcagactgaaaaggaagaca--ggctggtccctgG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1454220 139 + 3644372 AAGGGACATTTTCTACTTAAGAG--CCAGTGGTTTCGCTCCCCATTGTCCTCTCTAACATTCATCTTCAAT-AAACTTC-CTG-GTAGTTATTCTCT--CATGCTGTGCTGTGTGCT-GGCCGACTGAA---GAAAACA---GCTGGT-CCTGG i macNem1.NW_012011978v1 I 1 C 0 s cerAty1.NW_012000820v1 1408658 147 - 10304083 AAGGGACATTTTCTACTTAAGAGCACAGGTGGTTTCAGGCTCA--TGTCCTCTCTAAcattca--ttcaataaaacttcactg-gtagttattctgtgccatgctgtgatgtgtgctgggcagactgaaaaggaagaca--ggctggtccctgg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1485152 147 - 107702431 AAGGGACATTTTCTACTTAAGAGCACAGATGGTTTCAGGCTCA--TGTCCTCTCTAAcatttg--ttcaataaaacttcactg-gcagttattctgtgccatgctgtgctgtgtgctgggcaggctgaaaaggaagaca--ggctggtccctgg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 969641 147 - 2200435 AAGGGACATTTTCTACTTAAGAGCACAGGTGGTTTCAGGCTCA--TGTCCTCTCTAAcattca--ttcaataaaacttcactg-gtagttattctgtgccatgctgtgatgtgtgctgggcagactgaaaaggaagaca--ggctgatccctgg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1406692 147 - 13651311 AAGGGACATTTTCTACTTAAGAGCACAGATGATTTCAGGTTCG--TGTCCTCTCTAAcattca--ttcaataaaacttcactg-gcagttattctgtgccctgctgagctgtgtgctgggcagggtgaaaaggaagaca--ggctggtccctgG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1405723 145 - 108792865 AAGGGACATTTTCTACTTAGGAGCACAGATGGTTTCAGGCTCA--TGTC--CTCTAAGattca--ttcaataaattttcactg-gcaattattctgggccatgctatgatatgtactgggcaggctgagaaggaagaca--ggctggtccctgG i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1328743 145 + 1864846 AAGGGACATTTTCTACTCAGAAGCACAGAAGGTTTCAGGCTCA--TGTC--CTCTAAGattca--ttcaataaatcttcactg-gcaattattctaggccatgctatgatatgtactaggtaggctgagaaggaagaca--ggcttgtccctgG i cebCap1.NW_016107827v1 I 5 C 0 s aotNan1.NW_018513311v1 133190 145 + 287728 AAGGGACATTTTCTAATCAGGAGCACAGATGGTTTCAGGCTCA--TGTC--CTCTAAGattca--ttcagtaaatcttcactg-gcaattattctgggccatactgtggtatgtactggacaggctgagaaggaagaca--ggctggtccctgG i aotNan1.NW_018513311v1 C 0 I 1275 s otoGar3.GL873658 943991 140 + 5252280 AAGGGGCATTTTCTACTTAAGAACACAGGTTGCTGGGGGCTTA--CATCCTCATGAACTTTCT--CCCAAT-CAGCCTCACTG-GGCAGCGTTCTGTGTCACACTGGGCTGTGTGCTGAGCAGGCAGGAAAGGCAGACA--GG------CCTAG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1743901 150 + 4416731 AAGGCACATTTTTACATAAAGAGCAAAGGATCTGGGATACTCA--TGAACTCACTAATattcc--ttcactaaacctgcactgagcagcggttctgtgccgagctgagctctgtaccaagaatgcagacgtgaaagacacaggttcagtGCTGG i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e gorGor5.CYUI01015607v1 1401862 5 + 1464242 I a score=11953.000000 s hg38.chr2_KI270774v1_alt 141631 8 + 223625 -aa-----------ggtggg s panTro5.chr2A 1428644 8 + 111504155 -AA-----------GGTGGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1377745 8 + 114371477 -aa-----------ggtggg i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1124734 8 + 81552678 -AA-----------GGCGTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1454036 8 + 108979918 -aa-----------gatggg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1426468 8 - 111193037 -AA-----------GATGGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1454359 8 + 3644372 -AA-----------GATGGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1408805 8 - 10304083 -aa-----------gatggg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1485299 8 - 107702431 -aa-----------gatggg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 969788 8 - 2200435 -aa-----------gatggg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1406839 8 - 13651311 -AA-----------GAGGGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1405868 19 - 108792865 -AAGACCTTTACCTGATGGT i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1328888 19 + 1864846 -AAGATCTTTACCTGATGGT i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 944131 8 + 5252280 ------------TGGGCAGG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1744051 8 + 4416731 GAG-----------AACGT- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 133335 1275 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e gorGor5.CYUI01015607v1 1401862 5 + 1464242 I a score=264992.000000 s hg38.chr2_KI270774v1_alt 141639 39 + 223625 caggacag-ttacataaaccagcagttacaaAATTCTGGG s panTro5.chr2A 1428652 39 + 111504155 CAGGACAG-TTACATAAACCAGCAGTTACAAAATTCTGGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1377753 39 + 114371477 caggacag-ttacataaaccagcagttacaaAATTCTGGG i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1124742 39 + 81552678 CAGGACAG-TTACATAAACCAGCAGTTACAACATTCTGGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1454044 39 + 108979918 caggacag-ttacataaaccagcagttataaGATTCTGGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1426476 39 - 111193037 CAGGACAG-TTACATAAACCAGCAGTTATAAGATTCTGGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1454367 38 + 3644372 -AGGACAGTTTACATAAACCAGAAGTTAT-AGATTCTGGG i macNem1.NW_012011978v1 C 0 I 42 s cerAty1.NW_012000820v1 1408813 39 - 10304083 caggacag-ttacataaaccagcaattataaAATTCTGGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1485307 39 - 107702431 caggacag-ttacataaaccagcaattataaAATTCTGGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 969796 39 - 2200435 caggacag-ttacataaaccagcaattataaAATTCTGGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1406847 39 - 13651311 CAGGACAG-TTACATAAACCAGCAGTTATAAAATTCTGGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1405887 39 - 108792865 CAGGACAG-CTACAGGAACCAGCAGTCACATAATTCTGGG i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1328907 39 + 1864846 CAGGACAC-CTACAGGAACCAGCAGTCACATAATTCTGGG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 134610 39 + 287728 CAGGACAG-CTACAGGAACCAGCAGTCACATAATTCCGGA i aotNan1.NW_018513311v1 I 1275 C 0 s otoGar3.GL873658 944139 9 + 5252280 CTGGACAC-T------------------------------ i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1744059 39 + 4416731 CAGGCCAA-ATCAGTAAAACAACACTTGTAACACCTGAGG i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e gorGor5.CYUI01015607v1 1401862 5 + 1464242 I a score=320403.000000 s hg38.chr2_KI270774v1_alt 141678 49 + 223625 CATCTGCAGAGGAGGTCCCAGTGGGCAAAATCAAGACATCTAAACAAAA s panTro5.chr2A 1428691 49 + 111504155 CATCTGCAGAGGAGGTCCCAGTGGGCAAAATCAAGACATCTAAACAAAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1377792 49 + 114371477 CATCTGCAGAGGAGGTCCCAGTGGGCAAAATCAAGACATGTAAACAAAA i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1124781 49 + 81552678 CATCTGCAGAGGAGGTCCCAGTGGGCAAAATCGAGACATCTAAACAAAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1454083 49 + 108979918 CATCTGCAGAGGAAGTCCCAATGGGCAAAATCAAGGTATTTAAACCAAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1426515 49 - 111193037 CATCTGCAGAGGAAGTCCCAATGGGCAAAATCAAGGTATTTAAACCAAA i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1408852 49 - 10304083 CATCTGCAGAGGAAGTCCCAATGGGCAAAATCAAGGTATTTAAACCAAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1485346 49 - 107702431 CATCTGCAAAGGAGGTCCCAATGGGCAAAATCAAGGTATCTAAACCAAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 969835 49 - 2200435 CATCTGCAGAGGAAGTCCCAATGGGCAAAATCAAGGTATTTAAACCAAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1406886 49 - 13651311 CATCTGCAGAGAAGGTCCCAATGGGCAAAATCAAGGTATCTAAACCAAA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1405926 47 - 108792865 CATCTGC--AGAGGGTACCAATGGGCAAAAACAAGGCATCTAAACAAAA i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1328946 49 + 1864846 CATCTGTAAAGGGGGTCCCAAGGGTCAAAAACAAGGCATCTAAACAAAA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 134649 49 + 287728 CATCTGCAGAGGGGGTCCCAATGGGCAAAAACAAGGCATCCAAACAAAA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 944148 29 + 5252280 --------------GTCCCAGCCCACA------AGTCACCTGAACAAAG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1744098 43 + 4416731 CATCTGCATACGAGGCCCCAGGTGGCA------AGGCACCTAAACAAAA i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e macNem1.NW_012011978v1 1454405 42 + 3644372 I e gorGor5.CYUI01015607v1 1401862 5 + 1464242 I a score=58926.000000 s hg38.chr2_KI270774v1_alt 141727 6 + 223625 TATCCC s panTro5.chr2A 1428740 6 + 111504155 TATCCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1377841 6 + 114371477 TATCCC i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1124830 6 + 81552678 TATCCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1454132 6 + 108979918 TATCCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1426564 6 - 111193037 TATCCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1454447 6 + 3644372 TATCCC i macNem1.NW_012011978v1 I 42 C 0 s cerAty1.NW_012000820v1 1408901 6 - 10304083 TATCCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1485395 6 - 107702431 TATCCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 969884 6 - 2200435 TATCCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1406935 6 - 13651311 TATCCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1405973 6 - 108792865 TACCCC i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1328995 6 + 1864846 TATCCC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 134698 6 + 287728 TATCCC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 944177 6 + 5252280 TGGCCC i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1744141 6 + 4416731 TATACC i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e gorGor5.CYUI01015607v1 1401862 5 + 1464242 I a score=884481.000000 s hg38.chr2_KI270774v1_alt 141733 107 + 223625 AAAAGGAATAATATTGGGGGAAAGGTGGAA-------AAGGAGCAC-------------CATA-AAGACTGTGTC-AATCATAG-AAACTGAA-TTTCAGCCAGGTCCA---GC-CTCTGTCCCTGGGAGGAGGT s panTro5.chr2A 1428746 106 + 111504155 AAAAGGAATAATATTGGGGGAAAGGTT-AA-------AAGGAGCAC-------------CATA-AAGACTGTGTC-AATCATAG-AAACTGAA-TTTCAGCCAGGTCCA---GC-CTCTGTCCCTGGGAGGAGGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1377847 107 + 114371477 AAAAGGAATAATATTGGGGGAAAGGTGGAA-------AAGGAGCAC-------------CATA-AAGACTGTGTC-AATCATAG-AAACTGAA-TTTCAGCCAGGTCCA---GC-CTCTGTCCCTGGGAGGAGGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401867 107 + 1464242 AAAAGGAATAATATTGGGGGAAAGGTGGAA-------AAGGAGCAC-------------CATA-AAGACTGTGTC-AATCATAG-AAACTGAA-TTTCAACCAGGTCCA---GC-CTCTGTCCCTGGGAGGAGGT i gorGor5.CYUI01015607v1 I 5 C 0 s nomLeu3.chr19 1124836 107 + 81552678 AAAAGGAATAATACTGGGGGAAAGGGGGAC-------AAGGGGCAC-------------CATA-AAGACTGTGTC-AATCATAG-AAACTGAA-TTTCAGCCAGGTCCA---GC-CTCTGTCCCTGGGAGGAGGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1454138 105 + 108979918 AAAAGGAATAATATTGGGGGAAAGGAGGAA-------AAGGAGCAC-------------CATA-AAGACTGTGTC-AATCATAG-AAACTGAA-TTTCAACCAGGTCCA---GC---CTGTCCCTGGGAGGAGGT i rheMac8.chr13 C 0 I 2 s macFas5.chr13 1426570 105 - 111193037 AAAAGGAATAATATTGGGGGAAAGGAGGAA-------AAGGAGCAC-------------CATA-AAGACTGTGTC-AATCATAG-AAACTGAA-TTTCAACCAGGTCCA---GG---CTGTCCCTGGGAGGAGGT i macFas5.chr13 C 0 I 2 s macNem1.NW_012011978v1 1454453 106 + 3644372 AAAAGGAATAATATTGGGGGAAGGAGAGAA-------AGGAGGCAC-------------CATGCAAGACT-TGTC-AATCATAG-AAACTGAATTTTCAACCAGGTCCA---GC---CTGTCCCTGTGAGGAGGT i macNem1.NW_012011978v1 C 0 I 21 s cerAty1.NW_012000820v1 1408907 104 - 10304083 AAAAGGAATAATACT-GGGGAAAGGAGGAA-------AAGGAGCAC-------------CATA-AAGACTGTGTC-AATCACAG-AAACTGAA-TTTCAACCAGGTCCA---GC---CTGTCCCTGGGAGGAGGT i cerAty1.NW_012000820v1 C 0 I 2 s chlSab2.chr14 1485401 105 - 107702431 AAAAGGAATAATATTGGGGGAAAGGAGGAA-------AAGGAGCAC-------------CATA-AAGACTGTGTC-AATTGTAG-AAACTGAA-TTTCAACCAGGTCCA---GC---CTGTCCCTGGGAGGAGGT i chlSab2.chr14 C 0 I 2 s manLeu1.NW_012103754v1 969890 105 - 2200435 AAAAGGAATAATACTGGGGGAAAGGAGGAA-------AAGGAGCAC-------------CATA-AAGACTGTGTC-AATCACAG-AAACTGAA-TTTCAACCAGGTCCA---GC---CTGTCCCTGGGAGGAGGT i manLeu1.NW_012103754v1 C 0 I 2 s colAng1.NW_012118821v1 1406941 105 - 13651311 AAAAGGAATAATATTGGGGGAAAGGAGGAA-------AAGGAGCAC-------------CATA-AAGATTGTATC-AATCATAG-AAACTGAA-TTTCAGCCCGTTCCA---GC---CTGTCCCTGGGAGGAGGT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1405979 105 - 108792865 CAAAGGAATAATTTTAGGGGGAAATGGGGA-------AAGGAGCAC-------------CATA-AAAACTGTGTC-AATC--AG-AAACTGAA-TTTCAGCCAGGTCCA---GC-CTCTGTCCCTGGGAGGAGGT i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1329001 105 + 1864846 AAAAGGAATAATTTTAGGGGGAAATGGGGA-------AAGGAGCAC-------------CATA-GAAACTGTGTC-AATC--AG-AAACTGAA-TTTCAGCCAGGTCCA---GC-CTGTGTCCCTGGGAGGAGGT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 134704 102 + 287728 AAAAGGAATAATTTTCGCGGGAAACGAGGA-------AAGAAGCAC-------------CATA-AAAACCGTGTC-AATC-----AAACTGAA-TTTC-GCCAGGTCTG---GC-CTCTGTCCCCGGGAGGAGGT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 944183 125 + 5252280 AAAATGAAAAAC-TGGGGGGAGGGGCTGAAGCCATTCAAGGGTCACCAGGTGGTGGCTGCACA-AGGGCTATGTT-GGTCACAG-GAAGTGAA-TTCTGACCATGTCCA---GCTCCCCATCCCTAT-AGCAGC- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1744147 111 + 4416731 -AAGGGCAGAAC-TGGGGAAAAAGCTGGGA-------AAGGTGCAC-------------CGTA-AAATCTGTATCGAATCATAGTAAATTGACTTTTCAACCATCTCCCTTTGT-TCTTCTCCCTGGGAAGAGAA i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I a score=124265.000000 s hg38.chr2_KI270774v1_alt 141840 19 + 223625 CTCTCTCTCTCACACGCT-G-- s panTro5.chr2A 1428852 19 + 111504155 CTCTCTCTCTCACATGCT-G-- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1377954 19 + 114371477 CTCTCTCTCTCACATGCT-G-- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401974 19 + 1464242 CTCTCTCTCTCACATGCT-G-- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1124943 20 + 81552678 CTCTCTCTCTCACATGCTGG-- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1454245 19 + 108979918 CACTCTCTCTCACATGCT-G-- i rheMac8.chr13 I 2 C 0 s macFas5.chr13 1426677 19 - 111193037 CACTCTCTCTCACATGCT-G-- i macFas5.chr13 I 2 C 0 s cerAty1.NW_012000820v1 1409013 19 - 10304083 CACTCTCTCTCACATGCT-G-- i cerAty1.NW_012000820v1 I 2 C 0 s chlSab2.chr14 1485508 14 - 107702431 CA----CTCTCACATGC--A-- i chlSab2.chr14 I 2 C 0 s manLeu1.NW_012103754v1 969997 19 - 2200435 CACTCTCTCTCACATGCT-G-- i manLeu1.NW_012103754v1 I 2 C 0 s colAng1.NW_012118821v1 1407046 18 - 13651311 CACACTCTCTCACATGCG---- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1406084 19 - 108792865 CACTCTCTCTCACATGCT-G-- i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1329106 19 + 1864846 CACTCTCTCACACATGCT-G-- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 134806 19 + 287728 CACTCTCTCTCACATGCT-G-- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 944308 19 + 5252280 CAGTCTCTCTCATGTGGT-C-- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1744258 19 + 4416731 --GCCGTTCTCACATGGT-GTG i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e macNem1.NW_012011978v1 1454559 21 + 3644372 I a score=443250.000000 s hg38.chr2_KI270774v1_alt 141859 60 + 223625 GGGCTCAGACCCTGGGAGAC---AGGGGGCCCCTTGCTCTTCTCTGCAGAGCCCCCTCA-CCAG s panTro5.chr2A 1428871 60 + 111504155 GGGCTCAGACCCTGGGAGAC---AGGGGGCCCCTTGCTCTTCTCTGCAGAGCCCCCTCA-CCAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1377973 60 + 114371477 GGGCTCAGACCCTGGGAGAC---AGGGGGCCCCTTGCTCTTCTCTGCAGAGCCCCCTCA-CCAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1401993 59 + 1464242 GGGCTCAGACCCTGGGAGAC----GGGGGCCCCTCACTCTTCTCTGCAGAGCCCCCTCA-CCAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1124963 59 + 81552678 GGGCTCAGACCCTGGGTGAC---GGGGGGCCCCTCACTTTTCTCTGCAGAGCCCCCTCA-CCA- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1454264 61 + 108979918 GGGCTCAGACCCTGGATGAC--GGGGGGGTCCCTCGCTCTTCTCTGCAGAGCCTCCTCA-CCAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1426696 61 - 111193037 GGGCTCAGACCCTGGATGAC--GGGGGGGTCCCTCGCTCTTCTCTGTAGAGCCTCCTCA-CCAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1454580 58 + 3644372 GGGCTCAGACCCTGTATGAC----GGGGGTCCCTCGCTC-TCTCTGCGGAGCCTCCTCA-CCAG i macNem1.NW_012011978v1 I 21 I 30 s cerAty1.NW_012000820v1 1409032 63 - 10304083 GGGCTCAGACCCTGGATGACGGGGGGGGGTCCCTCGCTCTTCTCTGCAGAGCCTCCTCA-CCAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1485522 60 - 107702431 GGGCTCAGACCCTGGATGAC--GGGAGGGTCCCTTGCTCTTCTCTGCAGAGCCTCCTCA-CCA- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 970016 62 - 2200435 GGGCTCAGACCCTGGATGAC-GGGGGGGGTCCCTCGCTCTTCTCTGCAGAGCCTCCTCA-CCAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1407064 61 - 13651311 GGGCTCAGACCCTGGATGAC-GGGGGGAGTCCCTCGCTCTTCTCTGCAGAGCCTCCTCA-CCA- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1406103 60 - 108792865 GGGCCCAGACCCTAGACGAC---TGAGGGTCCCTTGCTCTTCTCAGAGGAGCCTCCTCC-CCAG i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1329125 60 + 1864846 GGGCCCAGACCCTAGACCAC---TGAGGGCCCCTTGCTCTTCTCTGAGGAGCCTCCTCC-CCAG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 134825 60 + 287728 GGGCCCAGACCCTAGACGAC---TGAGGGTCCCTTGCTCTTCTCTGAGGAGCCTCCTCC-CCAG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 944327 51 + 5252280 TGGCCCAGCCCCTGGGCCAA----CAGGGCCCGTCCCT---------GGAGCCTACTCATCCAG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1744277 43 + 4416731 GGGCACAGCCGTTGGGTTGG---TCAAGG-----------ACTCAGTGGAGTTTTCT------- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I a score=2552.000000 s hg38.chr2_KI270774v1_alt 141919 1 + 223625 G s panTro5.chr2A 1428931 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1378033 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1402052 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s manLeu1.NW_012103754v1 970078 1 - 2200435 G i manLeu1.NW_012103754v1 C 0 I 4743 s calJac3.chr14 1406163 1 - 108792865 A i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1329185 1 + 1864846 G i cebCap1.NW_016107827v1 C 0 I 46 s aotNan1.NW_018513311v1 134885 1 + 287728 G i aotNan1.NW_018513311v1 C 0 I 8 s otoGar3.GL873658 944378 1 + 5252280 G i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e dasNov3.JH576208 1744320 0 + 4416731 C e colAng1.NW_012118821v1 1407125 0 - 13651311 C e chlSab2.chr14 1485582 0 - 107702431 C e cerAty1.NW_012000820v1 1409095 0 - 10304083 C e macNem1.NW_012011978v1 1454638 30 + 3644372 I e macFas5.chr13 1426757 0 - 111193037 C e rheMac8.chr13 1454325 0 + 108979918 C e nomLeu3.chr19 1125022 0 + 81552678 C a score=1307.000000 s hg38.chr2_KI270774v1_alt 141920 12 + 223625 GCGGCCCCCTGC s panTro5.chr2A 1428932 12 + 111504155 GCGGCCCCCTGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1378034 12 + 114371477 GCGGCCCCCTGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1402053 12 + 1464242 GAGGCCCCCTGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1125022 10 + 81552678 --GGCATCCCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1454325 9 + 108979918 ---CCATCCCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1426757 9 - 111193037 ---CCATCCCTG i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1409095 9 - 10304083 ---GCATCCCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1485582 10 - 107702431 --GCCTTCCCTG i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1407125 10 - 13651311 --GCCATCCCTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1406164 8 - 108792865 ----CATCCCCA i calJac3.chr14 C 0 C 0 s otoGar3.GL873658 944379 4 + 5252280 -----ACCC--- i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 134886 8 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1329186 46 + 1864846 I e dasNov3.JH576208 1744320 0 + 4416731 C e manLeu1.NW_012103754v1 970079 4743 - 2200435 I e macNem1.NW_012011978v1 1454638 30 + 3644372 I a score=78167.000000 s hg38.chr2_KI270774v1_alt 141932 21 + 223625 ATGTGTTCCCTGCT---GCATGTA s panTro5.chr2A 1428944 21 + 111504155 ATGTGTCCCCTGCT---GCATGTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1378046 21 + 114371477 ATGTGTCCCCTGCT---GCACGTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1402065 21 + 1464242 ATGTGTCCCCCGCT---GCATGTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1125032 20 + 81552678 AAGTGGCCCC-GCT---GCATGTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1454334 24 + 108979918 AAGTGACCCCCGCTGCAGCATGTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1426766 24 - 111193037 AAGTGACCCCCGCTGCAGCATGTC i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1409104 24 - 10304083 AAGTGACGCCCACTGCAGCATGTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1485592 24 - 107702431 AAGTGACCCCCGCTGCAGCATGTC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1407135 24 - 13651311 AAGTGACCCCCGCTGCAGCATGTC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1406172 21 - 108792865 AAGTGGCCCCCACT---GCATTTA i calJac3.chr14 C 0 C 0 s aotNan1.NW_018513311v1 134894 21 + 287728 AAGTGGCCCCCACT---ACATGTA i aotNan1.NW_018513311v1 I 8 C 0 s otoGar3.GL873658 944383 21 + 5252280 AAGTGGCCCCAGCT---GCATGTG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1744320 2 + 4416731 ----------------------TA i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1329186 46 + 1864846 I e manLeu1.NW_012103754v1 970079 4743 - 2200435 I e macNem1.NW_012011978v1 1454638 30 + 3644372 I a score=45360.000000 s hg38.chr2_KI270774v1_alt 141953 5 + 223625 CCTCT s panTro5.chr2A 1428965 5 + 111504155 CCTCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1378067 5 + 114371477 CCTCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1402086 5 + 1464242 CCTCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1125052 5 + 81552678 CCTCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1454358 5 + 108979918 CCTCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1426790 5 - 111193037 CCTCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1454668 5 + 3644372 CCCCT i macNem1.NW_012011978v1 I 30 C 0 s cerAty1.NW_012000820v1 1409128 5 - 10304083 CCTCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1485616 5 - 107702431 CCTCT i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1407159 5 - 13651311 CCTCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1406193 5 - 108792865 CCTCT i calJac3.chr14 C 0 C 0 s aotNan1.NW_018513311v1 134915 5 + 287728 CCTCT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 944404 5 + 5252280 TCTCT i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1744322 5 + 4416731 CCTCC i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1329186 46 + 1864846 I e manLeu1.NW_012103754v1 970079 4743 - 2200435 I a score=42333.000000 s hg38.chr2_KI270774v1_alt 141958 8 + 223625 -AACCTGGG s panTro5.chr2A 1428970 8 + 111504155 -AACCTGGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1378072 8 + 114371477 -AACCTGGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1402091 8 + 1464242 -AACCTGGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1125057 8 + 81552678 -AACCTGGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1454363 8 + 108979918 -AACCTGGG i rheMac8.chr13 C 0 I 5 s macFas5.chr13 1426795 8 - 111193037 -AACCTGGG i macFas5.chr13 C 0 I 5 s macNem1.NW_012011978v1 1454673 8 + 3644372 -AACCTGGG i macNem1.NW_012011978v1 C 0 I 5 s cerAty1.NW_012000820v1 1409133 8 - 10304083 -AACCTGAG i cerAty1.NW_012000820v1 C 0 I 5 s chlSab2.chr14 1485621 8 - 107702431 -AACCGGGG i chlSab2.chr14 C 0 I 5 s colAng1.NW_012118821v1 1407164 8 - 13651311 -AACCTGGG i colAng1.NW_012118821v1 C 0 I 5 s calJac3.chr14 1406198 8 - 108792865 -GATCTGGA i calJac3.chr14 C 0 C 0 s aotNan1.NW_018513311v1 134920 8 + 287728 -GATCTGGA i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1744327 5 + 4416731 CATCC---- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1329186 46 + 1864846 I e otoGar3.GL873658 944409 0 + 5252280 C e manLeu1.NW_012103754v1 970079 4743 - 2200435 I a score=134299.000000 s hg38.chr2_KI270774v1_alt 141966 37 + 223625 Attc------------------------------------------------------tttctttcttttttttttttt------------------------------------------------------------------tgagctggagtc s panTro5.chr2A 1428978 36 + 111504155 Attc------------------------------------------------------tttctttcttttttttttttt-------------------------------------------------------------------gagctggagtc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1378080 35 + 114371477 Attc------------------------------------------------------tttctttctttttttttttt--------------------------------------------------------------------gagctggagtc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1402099 34 + 1464242 Attc------------------------------------------------------tttctttcttttttttttt---------------------------------------------------------------------gagctggagtc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1125065 32 + 81552678 Attc------------------------------------------------------tttctttcttttttttt-----------------------------------------------------------------------gagctggagtc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1454376 39 + 108979918 Attc----------------------------------------------------ttttttttttttttttttttttt------------------------------------------------------------------tgagctggagtc i rheMac8.chr13 I 5 I 8 s macFas5.chr13 1426808 39 - 111193037 Attc----------------------------------------------------ttttttttttttttttttttttt------------------------------------------------------------------tgagctggagtc i macFas5.chr13 I 5 I 8 s macNem1.NW_012011978v1 1454686 33 + 3644372 ----------------------------------------------------------TATCCtttttttttttttttt------------------------------------------------------------------tgagctggagtc i macNem1.NW_012011978v1 I 5 I 5 s cerAty1.NW_012000820v1 1409146 91 - 10304083 Attctttttttttttttttttttttttttgggtgttttttttttttttctttttttttttttttttttttttttttttt------------------------------------------------------------------tgagctggagtc i cerAty1.NW_012000820v1 I 5 I 8 s chlSab2.chr14 1485634 44 - 107702431 ATTC-----------------------------------------------TCtttttttttttttttttttttttttt------------------------------------------------------------------tgagctggagtc i chlSab2.chr14 I 5 I 8 s colAng1.NW_012118821v1 1407177 28 - 13651311 Attc---------------------------------------------------------------tctttttttttt------------------------------------------------------------------tgagctggagtc i colAng1.NW_012118821v1 I 5 I 8 s calJac3.chr14 1406206 33 - 108792865 GTTC------------------------------------------------------Attcttttttttttttt----------------------------------------------------------------------tgagatggagtc i calJac3.chr14 C 0 I 8 s cebCap1.NW_016107827v1 1329232 103 + 1864846 Attc------------------------------------------------------ttttttttttttttttttttttGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgagatgaagtc i cebCap1.NW_016107827v1 I 46 I 8 s aotNan1.NW_018513311v1 134928 37 + 287728 GTTC------------------------------------------------------Attcttttttttttttttttt------------------------------------------------------------------tgagatggagtc i aotNan1.NW_018513311v1 C 0 I 8 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e otoGar3.GL873658 944409 0 + 5252280 C e dasNov3.JH576208 1744332 0 + 4416731 C e manLeu1.NW_012103754v1 970079 4743 - 2200435 I a score=1254498.000000 s hg38.chr2_KI270774v1_alt 142003 168 + 223625 ttgcccaggctggagtg-tagtggc-----gcaatctcagctcactgcaacctccgcctcccggatataagcgattctcctgcctcagcatcctgagt-agctgggactacaggcatgcgccaccatgcctggctaatttttctatttttaatagaga-tggggtttcatcgtg-tt s panTro5.chr2A 1429014 168 + 111504155 ttgcccaggctggagtg-tagtggc-----gcaatctcagctcactgcaacctccgcctcccggatataagcgattctcctgcctcagcatcctgagt-agctgggactacaggcatgcgccaccatgcctggctaatttttctatttttaatagaga-tggggtttcatcgtg-tt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1378115 168 + 114371477 ttgcccaggctggagtg-tagtggc-----gcaatctcagctcactgcaacctccgcctcccggatataagcgattctcctgcctcagcatcctgagt-agctgggactacaggcatgcgccaccatgcctggctaatttttctatttttaatagaga-tggggtttcatcgtg-tt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1402133 168 + 1464242 ttgcccaggctggagtg-cagtggc-----gcaatctcagctcactgcaacctccacctcccagatataagcgattctcctgcctcagcatcctgagt-agctgggactacaggcatgcaccaccatgcccagctaatttttctaattttagtagaga-tggggtttcaccatg-tt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1125097 167 + 81552678 ttgccgaggctggagtg-cagtggc-----gcaatctcagctcactgcaacctccgcctcccagatataagcgattctcctgcctcagcatcctgagt-agctgggactacaggcatgt-ccaccatgcccggctaatttttctatttttagtagaga-tggggtttcaccacg-tt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1454423 168 + 108979918 ttgcccaggctggagtg-cagtggc-----acaatctcagctcactgcaacctccacctcccagatttaagcaattctcctgcctcagcctcctgagt-agctgggacgacaggtgtgcaccaccatgcccggctaatttttctatttttagtagaaa-cagggtttcaccacg-tt i rheMac8.chr13 I 8 C 0 s macFas5.chr13 1426855 168 - 111193037 ttgcccaggctggagtg-cagtggc-----acaatctcagctcactgcaacctccacctcccagatttaagcaattctcctgcctcagcctcctgagt-agctgggacgacaggtgtgcaccaccatgcccggctaatttttctatttttagtagaaa-cagggtttcaccacg-tt i macFas5.chr13 I 8 C 0 s macNem1.NW_012011978v1 1454724 173 + 3644372 gtgcccaggctgcagtgccagtggccaaaaacaatctca-ctcactgcaaacctccactgccagatttaa-caattctcctg-ctcagccctctgagtaagctgggacgacaggcgtgcaccaccatgcccag-taatttttctatttttagtagaaaccagggtttcaccacgttt i macNem1.NW_012011978v1 I 5 C 0 s cerAty1.NW_012000820v1 1409245 168 - 10304083 ttgcccaggctggagtg-cagtggc-----acaatctcagctcactgcaacctccacctcccagatttaagcaattctcctgcctcagcctcctgagt-agctgggacgacaggcgtgcaccaccatgcccggctaatttttctatttttagtagaaa-cagggtttcaccatg-tt i cerAty1.NW_012000820v1 I 8 C 0 s chlSab2.chr14 1485686 168 - 107702431 ttgcccaggctggagtg-cagtggc-----acaatctcagctcactgcgacctctagctcccagattaaagcaattctcctgcctcagcctcctgagt-agctgggactccaggcatgcaccaccatgcctgtctaatttttctatttttagtagaga-cagagtttcaccatg-tt i chlSab2.chr14 I 8 C 0 s manLeu1.NW_012103754v1 974822 168 - 2200435 ttgcccaggctggagtg-cagtggc-----acaatctcagctcactgcaacctccacctcccagatttaagcaattctcctgcctcagcctcctgagt-agctgggacgacaggcgtgcaccaccatgcctggctaatttttctatttttagtagaaa-cagggtttcaccatg-tt i manLeu1.NW_012103754v1 I 4743 C 0 s colAng1.NW_012118821v1 1407213 163 - 13651311 ttgcccagactg------cagtggc-----acaatctcagctcactgcgacctccagctcccagatttaagcaattctcctgcctcagcctcctgtgt-agctgggactccaggcatgcaccaccatgcccggctaatttttctattttcagtagaga-cagagtttcaccatg-tt i colAng1.NW_012118821v1 I 8 C 0 s calJac3.chr14 1406247 168 - 108792865 ttgcccaggctggaatg-cagtggt-----gcaatttcagcccactgtaacctccacctcccagatttaagtgattctcctgcctcagcctcctgagt-agctgggattacaggtgggccctaccacgcccgactaatttttttatttttattagaga-ctgtgtttcactgtg-tt i calJac3.chr14 I 8 C 0 s cebCap1.NW_016107827v1 1329343 168 + 1864846 ttgcccaggctggaggg-cagtggc-----gcaatctcagctcacggcaacctccacctcccagatttaagtgattctcctgcctcagcctcctgagt-acctgggattacaggcgggcaccaccatgcccgactaatttttttatttttattagaga-ctgggtttcactgtg-tt i cebCap1.NW_016107827v1 I 8 C 0 s aotNan1.NW_018513311v1 134973 168 + 287728 ttgcccaggctggagtg-cagtggt-----gcaatctcagctcacggcaacctccgtctcccagatttaagtgattctcctgcctcagcctcctgagt-agctgggattacaggcgggcaccaccacgcctgactaatttttttattttcattagaga-ctgggtttcactgtg-tt i aotNan1.NW_018513311v1 I 8 C 0 s dasNov3.JH576208 1744332 30 + 4416731 -------------------------------------------------------------------------------------------CTGGAGT-GGCC----CCACTGGCATGAGCCTCCA--------------------------------------------------- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e otoGar3.GL873658 944409 0 + 5252280 C a score=1775218.000000 s hg38.chr2_KI270774v1_alt 142171 221 + 223625 ggccaggctggtctcaaactcctgacctcaagtgatctgcccaccttggcatcccaaagtgctgggattacaggtatgagccactgtgcctggccCTAGTGTT-ATTCTTCACCACTCAGGACCCCAAAGTTCTCATCTGTTAACATTAG-AGCTGTTAGATCTTGCAGAAGTACCTGTATCTTCAGCAATGAA-CAGT-CTGCCAAGCAGAGGCCCTCGTTCCC s panTro5.chr2A 1429182 221 + 111504155 ggccaggctggtctcaaactcctgacctcaagtgatctgcccaccttggcatcccaaagtgctgggattacaggtatgagccactgtgcctggccCTAGTGTT-ATTCTTCACCACTCAGGACCCCAAAGTTCTCATCTGTTAACATTAG-AGCTGTTAGATCTTGCAGAAGTACCTGTATCTTCAGCAATGAA-CAGT-CTGCCAAGCAGAGGCCCTCGTTCCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1378283 221 + 114371477 ggccaggctggtctcaaactcctgacctcaagtgatctgcccaccttggcatcccaaagtgctgggattacaggtatgagccactgtgcctggccCTAGTGTT-ATTcttcaccactcagggccccaaagttctcatctgttaacattag-agctgttagaTCTTGCAGAAGTACCTGTATCTTCAGCAATGAA-CAGT-CTGCCAAGCAGAGGCCCTCGTTCCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1402301 222 + 1464242 ggccaggctggtctcaaactcctgacctcaagtgatccacctgccttgccctcccaaaatgctgggattacaggtgtgagctgctgcgcccggccCTACTGTTCAGTCTCCACCACCCAGGACCCCAAAGTTCTCATCTGTTAACATTAG-AGCTGTTAGATCTTGCAGAAGTACCTGTATCTTCAGCAATGAA-CAGT-CCACCAAGCAGAGGCCCTCGTTCCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1125264 222 + 81552678 ggccaggctggtctcaaactcctgacctcaagtgatctgcctgccttggcatcccaaagtgctgggattacaggtgtgagctgctgtgcccggccCTACTGTTCATTCTTCACCACCCAAGACCCCAAAGTTCTCATCTGTTAACATTAG-AGCTATTAGATCTTGCAGAAGTACCTGTATCTTCAGCAATGAA-CAGT-CTGCCAAGCAGAGGTCCTTGTTCCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1454591 221 + 108979918 gcccaggctggtcttaaactcctgacctcaactgatccacctgcctcggcctcccaaagtgttgggattacaggtgtgagccaccgcgcctggccCTAGTGTTCATTCTTCA-TACCCAGGACCCCAAAGTTCTCATCTGTTAACATTGG-AGCTATCAGATCTTGCAGAAGTACCTGTATCTTCAGCAATGAA-CGGT-CCGCCAAGCAGAGGCCCTCATTCCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1427023 221 - 111193037 gcccaggctggtcttaaattcctgacctcaactgatccacctgcctcggcctcccaaagtgttgggattacaggtgtgagccaccgcgcctggccCTAGTGTTCATTCTTCA-TACCCAGGACCCCAAAGTTCTCATCTGTTAACATTGG-AGCTATCAGATCTTGCAGAAGTACCTGTATCTTCAGCAATGAA-CGGT-CCGCCAAGCAGAGGCCCTCATTCCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1454897 217 + 3644372 gcccaggct-gtcttaaactcctgacctcaactgat-cacctg-ctcgccctcccaaagtgttgggattacagggtgtagccaccgcgcctggccCTAGTGTTCA-TCTTCA-TACCCAGGACCCCAAAGTTCTCATCTGTTAACATTGG-AGCTATCAGATCTTGCAGAAGTACCTGTATCTTCAGCAATGAA-CGGT-CCGCCAAGCAGAGGCCCTCATTCCC i macNem1.NW_012011978v1 C 0 I 34 s cerAty1.NW_012000820v1 1409413 221 - 10304083 gcccaggctggtcttaaactcctgacctcaactgatccacctgcctcgacctcccaaagtgttgggattacaggtgtgagccaccgcgcctggccCTAGTGTTCATTCTTCA-TACCCAGGACCCCAAAGTTCTCATCTGTTAACATTGG-AGCTATCAGATCTTGCAGAAGTATCTGTATCTTCAGCAATGAA-CGGT-CCGCCAAGCAGAGGCCCTCGTGCCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1485854 221 - 107702431 gcccaggctggtcttaaactcctgacctcaactgatccacctgcctcggcctcccaaagtgttgggattacaggtgtgagccaccgcgcctggccCTAGTGTTCATTCTTCA-TACCCAGGACCCCAAAGTTCTCATCTGTTAACATTGG-AGCTATCAGATCTTGCAGAAGTACCTGTATCTTCAGCAATGAA-CAGT-CTGCCAAGCAGAGGCCCTCATTCCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 974990 221 - 2200435 gcccaggctggtcttaaactcctgacctcaactgatccacctgcctcgacctcccaaagtgttgggattacaggtgtgagccaccgcgcctggccCTAGTGTTCATTCTTCA-TACCCAGGACCCCAAAGTTCTCATCTGTTAACATTGG-AGCTATCAGATCTTGCAGAAGTATCTGTATCTTCAGCAATGAA-CGGT-CCGCCAAGCAGGGGCCCTCACACCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1407376 220 - 13651311 gcccaggctggtcttaaactcctgacctcaactgatccacctgcctcggcctcccaaa-tgttgggattacaggtgtgagccaccacgcctggccCTAGTGTTCATTCTTCA-TACCCAGGACCCCAAAGTTCTCATCTGTTAACACTGG-AGCTATTAGATCTTGGAGAAGTACCTGTATCTTCAGCAATGAA-CAGT-CAGCCAAGCAGAGGCCCTCGTTCCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1406415 203 - 108792865 ggctaggctggtctcgatctcctgacctcg--tgatccactcgcctctgcctcccagagtactgggattacaggtgtgaatcactatgcccagccCTAGTGTTCCTTCTTGACCACCCAGAAACCCAGAGGTCTCATCAGTTAACA-----------------TTGCAGAGGTACGTGTATCTCCAGCAATGAA-CAGT-CTGCCAAGCAGAGGCCT-CATTCCC i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1329511 220 + 1864846 ggctaggctggtctcaatctcctgacctcg--tgatccactcgcttctgcctcccagagtgctgggattacaggtgtgaatcactgcgcctggccCTAGTGTTCATTCTTGACCACCCAGGACCCCAGAGGTCTCATCTGTTAACACTGG-AGCTATTAGGTCCTGCAGAGGCACCTGTATCTCCAGCAATGAA-CAGT-CTGCCAAGCAGAGGCCCACATTCCC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 135141 220 + 287728 ggctaggctggtctcgatctcctgacctcg--tgatccactcgcctctgcctcccagagtgctgggattacaggtgtgaatcactgtgcccggccCTAGTGTTCATTCTTGACCACCCAGGACCCCAGAGGTCTCATCTGTTAACATTGG-AGCTATCAGATCCTTCAGAGGTACCTGTATCTCCAGCAATGAA-CAGT-CTGCCAAGCAGAGGCCCTCATTCCC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 944409 127 + 5252280 GGGCAGGGTACTCT------------------------------CTTGGCCT-------------------------------------------------------------CACACGAGGCCC--GAGTTCTTATCT-CTGGCAGAGGCAGCTGTCAGCTCTTGCAGAAGTACCCAGATCTGCAGCAATGAGCCAGT----CCAGGCAGAGCCCCTTGTTCAC i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1744362 127 + 4416731 ------------------------------------------GCCCTGCCGTTCTA------------------TCTCAGCCAC-------------------------------CCTGGGAGGCCAGAGGTCCT-----CTAAGATAAG-AGCTATGAGTTCTTACAGAAGTACCCATATCTCCAGCAATGAA-CAGTCCCACCAGGCACAGCTCCTTGTTCAC i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I a score=253192.000000 s hg38.chr2_KI270774v1_alt 142392 35 + 223625 AGCTAAGTGGCTCCCCAGCACAATCTGTGCAAAAA-------- s panTro5.chr2A 1429403 35 + 111504155 AGCTAAGTGGCTCCCCAGCAGAATCTGTGCAAAAA-------- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1378504 35 + 114371477 AGCTAAGTGGCTCCCCAGCAGAATCTGTGCAAAAA-------- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1402523 34 + 1464242 AGCTAAGTGGCTCCCCAGCAGAATCTGTGC-AAAA-------- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1125486 34 + 81552678 AGCTAAGTGGCTCCCAAGCAGAATCTGTGC-AAAA-------- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1454812 35 + 108979918 AGCTAAGAGGCTCCCGAGCAGAATCTCTGCAAAAA-------- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1427244 35 - 111193037 AGCTAAGAGGCTCCCGAGCAGAATCTCTGCAAAAA-------- i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1409634 35 - 10304083 AGCTAAGAGGCTCCCGAGCAGAATCTCTGCAAAAA-------- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1486075 35 - 107702431 AGCTAAGTGGCTCCCAAGCAGAATCTCTGCAAAAA-------- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 975211 35 - 2200435 AGCTAAGAGGCTCCCGAGCAGAATCTCTGCAAAAA-------- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1407596 35 - 13651311 AGCTAAGTGGCTCCCAAGCAGAATCTCTGCAAAAA-------- i colAng1.NW_012118821v1 C 0 I 4 s calJac3.chr14 1406618 33 - 108792865 AGCTAAGTGGCTCCAAAGCAGAATCTCTGCAAA---------- i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1329731 33 + 1864846 AACTAAGCGGCTCCCAAGTAGAATCTCTGCAAA---------- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 135361 31 + 287728 AGCTAAGTGGCTCCCAAGTAGAA--TCTGCAAA---------- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 944536 35 + 5252280 AGCCAAGTGGCTGCAAACCAGGATCACTGCAAAAA-------- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1744489 43 + 4416731 AGCTAAGAGGTTGCAAACCAGAATAGCTGCCAAGACAAAAAAA i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e macNem1.NW_012011978v1 1455114 34 + 3644372 I a score=8190.000000 s hg38.chr2_KI270774v1_alt 142427 2 + 223625 AA s panTro5.chr2A 1429438 2 + 111504155 AA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1378539 2 + 114371477 AA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1402557 2 + 1464242 AA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1125520 2 + 81552678 AA i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1406651 2 - 108792865 AA i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1329764 2 + 1864846 AA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 135392 2 + 287728 AA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 944571 2 + 5252280 AA i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1744532 2 + 4416731 AA i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I e manLeu1.NW_012103754v1 975246 0 - 2200435 C e chlSab2.chr14 1486110 0 - 107702431 C e cerAty1.NW_012000820v1 1409669 0 - 10304083 C e macNem1.NW_012011978v1 1455114 34 + 3644372 I e macFas5.chr13 1427279 0 - 111193037 C e rheMac8.chr13 1454847 0 + 108979918 C a score=541516.000000 s hg38.chr2_KI270774v1_alt 142429 73 + 223625 -----TGA------------------CTGAGTT---ATGCAGCCTGGAGAAGCAGTGGAGATGGGCACCTATTATCTATCAGGTCTTGGGTTCCAGGCT s panTro5.chr2A 1429440 73 + 111504155 -----TGA------------------CTGAGTT---ATGCAGCCTGGAGAATCAGTGGAGATGGGCACCTATTATCTATCAGGTCTTGGGTTCCAGGCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1378541 73 + 114371477 -----TGA------------------CTGAGTT---ATGCAGCCTGGAGAAGCAGTGGAGATGGGCACCTATTATCTATCAGGTCTTGGGTTCCAGGCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1402559 72 + 1464242 -----TGA------------------CTGAGTT---ATGCAGCCTGGAGAAGCAGTGGAGATGGGCA-CTATTATCTATCAGGTCTTGGGTTCCAGGCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1125522 73 + 81552678 -----TGA------------------CTGAGTT---ATgcagcctggagaagcagtggagacgggcacctattatctatcaggtcttgggttccaggct i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1454847 73 + 108979918 -----CGA------------------CTGAGTT---GTGCAGCCTGGAGAAGCAGTGGAGACGGGCACCTGTTATCTGTCAGGTCTTGGGTTCCAGGCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1427279 73 - 111193037 -----CGA------------------CTGAGTT---GTGCAGCCTGGAGAAGCAGTGGAGACAGGCACCTGTTATCTGTCAGGTCTTGGGTTCCAGGCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1455148 73 + 3644372 -----CGA------------------CTGAGTT---GTGCAGCCTGGAGAAGCAGTGGAGACGGGTACCTGTTATCTGTCAGGTCTTGGGTTCCAGGCT i macNem1.NW_012011978v1 I 34 C 0 s cerAty1.NW_012000820v1 1409669 73 - 10304083 -----CGA------------------CTGAGTT---GTGCAGCCTGGAGAAGCGGTGGAGACGGGTACCTGTTATCTGTCAGGTCTTGGGTTCCAGGCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1486110 73 - 107702431 -----CGA------------------CTGAGTT---GTGCAGCCTGGAGAAGCGGTGGAGACGGGCACCTGTTCTGTGTCAGGTCTTGGGTTCCAGGCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 975246 73 - 2200435 -----CGA------------------CTGAGTT---GTGCAGCCTGGAGAAGCGGTGGAGACGGGCACCTGTTATCTGTCAGGTCTTGGGTTCCAGGCT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1406653 73 - 108792865 -----TGA------------------CCGCGTT---ATGCAGCTTGGAGAAGCAGTGGAGACTATCACCTATTCTCTATCAGGTCTTGGGTTCCAGGCT i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1329766 73 + 1864846 -----TGA------------------CTGCATT---ATGCAGCCTGGAGAGGCCGTGGAGCTTGGCCCCTGTTCTCTCTCAGGCCTTGGGTTCCAGGCT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 135394 73 + 287728 -----TGA------------------CTGCGTT---CTGCAGCCTGGAGAAGCAGTGGAGACTGGTACCCACTCTCCATCAGGTCTTGGGTTCCAGGCT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 944573 70 + 5252280 -------C------------------TCCAGCT---CTGCAGCCT-AAGGCATGGCAGAGACCACCATCTACGATGTTGTGAGTCCCAGGCGCCAGGCT i otoGar3.GL873658 C 0 I 286 s dasNov3.JH576208 1744534 99 + 4416731 AAACCTAAAGCAAACAAACAAAAATCCAGAATTATGATGCAGCATAGAGAAGTGGTTGAACCAGTTTCTTTAATCTTAAAATGTCTTTGGTTCAAGTCT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I a score=50610.000000 s hg38.chr2_KI270774v1_alt 142502 5 + 223625 TGCCT s panTro5.chr2A 1429513 5 + 111504155 TGCCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1378614 5 + 114371477 TGCCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1402631 5 + 1464242 TGCCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1125595 5 + 81552678 tgcct i nomLeu3.chr19 C 0 I 3 s rheMac8.chr13 1454920 5 + 108979918 TGCCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1427352 5 - 111193037 TGCCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1455221 5 + 3644372 TGCCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1409742 5 - 10304083 TGCCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1486183 5 - 107702431 TGCCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 975319 5 - 2200435 TGCCT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1406726 5 - 108792865 TGCCT i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1329839 5 + 1864846 TGCCT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 135467 5 + 287728 TGCCT i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1744633 5 + 4416731 TGCCT i dasNov3.JH576208 C 0 I 1 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e otoGar3.GL873658 944643 286 + 5252280 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I a score=22373.000000 s hg38.chr2_KI270774v1_alt 142507 3 + 223625 TGT s panTro5.chr2A 1429518 3 + 111504155 TGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1378619 3 + 114371477 TGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1402636 3 + 1464242 TGT i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1454925 3 + 108979918 TGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1427357 3 - 111193037 TGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1455226 3 + 3644372 TGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1409747 3 - 10304083 TGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1486188 3 - 107702431 TGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 975324 3 - 2200435 TGT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1406731 3 - 108792865 TGT i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1329844 3 + 1864846 TGT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 135472 3 + 287728 TGT i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1744639 3 + 4416731 TAC i dasNov3.JH576208 I 1 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e otoGar3.GL873658 944643 286 + 5252280 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I e nomLeu3.chr19 1125600 3 + 81552678 I a score=76383.000000 s hg38.chr2_KI270774v1_alt 142510 28 + 223625 AACTTATTAGCTGCGTG--TATATAGGTTT s panTro5.chr2A 1429521 28 + 111504155 AACTTATTATCTGCGTG--TATATAGGTTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1378622 28 + 114371477 AACTTATTGTCTGCGTG--TATATAGGTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1402639 28 + 1464242 AACTTATTATCTGCGTG--TATATAGGTTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1125603 30 + 81552678 aacttattagctgcgtgTATATATAGGTTT i nomLeu3.chr19 I 3 C 0 s rheMac8.chr13 1454928 15 + 108979918 AACTTATCAGCTGCT--------------- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1427360 15 - 111193037 AACTTATCAGCTGCT--------------- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1455229 15 + 3644372 AACTTATCAGCTGCT--------------- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1409750 15 - 10304083 AACTTATCAGCTGCT--------------- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1486191 15 - 107702431 AACTTATCAGCTGCT--------------- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 975327 15 - 2200435 AACTTATCAGCTGCT--------------- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1406734 28 - 108792865 AACTTATTAGCTGCGTG--TGTATAGGTTT i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1329847 28 + 1864846 AACTTATTAGCTGTGTG--TGTATAGGTTT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 135475 28 + 287728 AACTTATTAGCTGCATG--TGTATAGGTTT i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1744642 24 + 4416731 AACTCATTGTGTACG------TATAGGTGT i dasNov3.JH576208 C 0 I 43 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e otoGar3.GL873658 944643 286 + 5252280 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I a score=16466.000000 s hg38.chr2_KI270774v1_alt 142538 28 + 223625 GTTGTCCATAAAAAGAGTATATTTCCCA s panTro5.chr2A 1429549 28 + 111504155 GTTGTCTGTAAAAAGAGTATATTTCCCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1378650 28 + 114371477 GTTGTCTGTAAAAAGAGTATATTTCCCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1402667 28 + 1464242 GTTGTCCGTAAAAAGAGTATATTTCCCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1125633 28 + 81552678 GTTGTCCATAAAAAGAGTGTATTTCCCA i nomLeu3.chr19 C 0 T 61 s calJac3.chr14 1406762 5 - 108792865 GTTGT----------------------- i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1329875 5 + 1864846 GTTGT----------------------- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 135503 5 + 287728 GTTGT----------------------- i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e otoGar3.GL873658 944643 286 + 5252280 I e dasNov3.JH576208 1744666 43 + 4416731 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I e manLeu1.NW_012103754v1 975342 0 - 2200435 C e chlSab2.chr14 1486206 0 - 107702431 C e cerAty1.NW_012000820v1 1409765 0 - 10304083 C e macNem1.NW_012011978v1 1455244 0 + 3644372 C e macFas5.chr13 1427375 0 - 111193037 C e rheMac8.chr13 1454943 0 + 108979918 C a score=4090.000000 s hg38.chr2_KI270774v1_alt 142566 9 + 223625 GGCTGGCCT s panTro5.chr2A 1429577 9 + 111504155 GGTTTGCCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1378678 9 + 114371477 GGTTTGCCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1402695 9 + 1464242 GGCTTGCCT i gorGor5.CYUI01015607v1 C 0 C 0 e aotNan1.NW_018513311v1 135508 0 + 287728 C e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1329880 0 + 1864846 C e otoGar3.GL873658 944643 286 + 5252280 I e dasNov3.JH576208 1744666 43 + 4416731 I e calJac3.chr14 1406767 0 - 108792865 C e colAng1.NW_012118821v1 1407631 4 - 13651311 I e manLeu1.NW_012103754v1 975342 0 - 2200435 C e chlSab2.chr14 1486206 0 - 107702431 C e cerAty1.NW_012000820v1 1409765 0 - 10304083 C e macNem1.NW_012011978v1 1455244 0 + 3644372 C e macFas5.chr13 1427375 0 - 111193037 C e rheMac8.chr13 1454943 0 + 108979918 C e nomLeu3.chr19 1125661 61 + 81552678 T a score=130731.000000 s hg38.chr2_KI270774v1_alt 142575 49 + 223625 TGTAACTTATTAGCTGCATG--TATATAGGTTTGTTGTCCATAAAAAGAGT s panTro5.chr2A 1429586 49 + 111504155 TGTAACTTATTAGCTGCATG--TATATAGGTTTGTTGTCCATAAAAAGAGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1378687 49 + 114371477 TGTAACTTATTAGCTGCATG--TATATAGGTTTGTTGTCCATAAAAAGAGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1402704 49 + 1464242 TGTAACTTATTAGCTGCATG--TATATAGGTTTGTTGTCCGTAAAAAGAGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1125600 51 + 81552678 tgtaacttattagctgcgtgTATATATAGGTTTGTTGTCCATAAAAAGAGT i nomLeu3.chr19 T 61 C 0 s rheMac8.chr13 1454943 31 + 108979918 ------------------TG--TATATAGGTTTGTTGTCTGTAAAAAGAGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1427375 31 - 111193037 ------------------TG--TATATAGGTTTGTTGTCTGTAAAAAGAGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1455244 31 + 3644372 ------------------TG--TATATAGGTTTGTTGTCTGTAAAAAGAGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1409765 31 - 10304083 ------------------TG--TATATAGGTTTGTTGTCTGTAAAAAGAGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1486206 31 - 107702431 ------------------TG--TATATAGGTTCATTGTCTGTAAAAAGAGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 975342 31 - 2200435 ------------------TG--TATATAGGTTTGTTGTCTGTAAAAAGAGT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1406767 13 - 108792865 --------------------------------------ATGTATAAAGAGT i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1329880 13 + 1864846 --------------------------------------ATGTAAAAAGAGT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 135508 13 + 287728 --------------------------------------ATGTAAAAAGAGT i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e otoGar3.GL873658 944643 286 + 5252280 I e dasNov3.JH576208 1744666 43 + 4416731 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I a score=10203.000000 s hg38.chr2_KI270774v1_alt 142624 4 + 223625 ATAT-- s panTro5.chr2A 1429635 4 + 111504155 ATAT-- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1378736 4 + 114371477 ATAT-- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1402753 4 + 1464242 ATAC-- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1125651 4 + 81552678 GTAT-- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1454974 4 + 108979918 CTAT-- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1427406 4 - 111193037 CTAT-- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1455275 4 + 3644372 CTAT-- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1409796 4 - 10304083 CTAT-- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1486237 4 - 107702431 CTAT-- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 975373 4 - 2200435 CTAT-- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1406780 4 - 108792865 ATTT-- i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1329893 4 + 1864846 GTAT-- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 135521 4 + 287728 TTAC-- i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1744709 4 + 4416731 --ATAA i dasNov3.JH576208 I 43 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e otoGar3.GL873658 944643 286 + 5252280 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I a score=734620.000000 s hg38.chr2_KI270774v1_alt 142628 84 + 223625 TTCCCACCTAATAATGTAGCAATTAGAATGAAATGAGATCGAATTTGCAAAACCAGGCTCAGAGAAGGAATTCAATGAACGTGT s panTro5.chr2A 1429639 84 + 111504155 TTCCCACCTAATAATGTAGCAATTAGAATGAAATGAGATCGAATTTGCAAAACCAGGCTCAGAGAAGGAATTCAATGAACGTGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1378740 84 + 114371477 TTCCCACCTAATAATGTAGCAATTAGAATGAAATGAGATCGAATTTGCAAAACCAGGCTCAGAGAAGGAATTCAATGAACGCGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1402757 84 + 1464242 TTCCCACCTAATAATGTAGCAATTAGAATGAAATGAGACCGAATTTGCAAAACCAGGCTCAGAGAAGGAATTCGATGAATGTGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1125655 84 + 81552678 TTCCCACCTAATAATGTAGCAATTAGAATGAAATGAAATCGAATTTGCAAAACCAGGCTCGGAGAAGGAATTCGATGAATGTGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1454978 84 + 108979918 TTCCCACCTAATAGTGTAGCAATTAAAATGAAATGAGATCGAATTTGCAAAACCAGGCTCGGAGAAGGAATTCGATGAATGTGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1427410 84 - 111193037 TTCCCACCTAATAGTGTAGCAATTAAAATGAAATGAGATCGAATTTGCAAAACCAGGCTCGGAGAAGGAATTCGATGAATGTGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1455279 84 + 3644372 TTCCCACCTAATAGTGTAGCAATTAAAATGAAATGAGATCGAATTTGCAAAACCAGGCTCGGAGAAGGAATTCGATGAATGTGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1409800 84 - 10304083 TTCCCACCTAATAGTGTAGCAATTAAAATGAAATGAGATCGAATTTGCAAAACCAGGCTCGGAGAAGGAATTCGATGAATGTGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1486241 84 - 107702431 TTCCCACCTAATAGTGTAGCAATTAAAATGAAATGAGATTGAATTTGCAAAACCAGACTCGGAGAAGGAATTCGATGAATGTGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 975377 84 - 2200435 TTCCCACCTAATAGTGTAGCAATTAAAATGAAATGAGATCGAATTTGCAAAACCAGGCTCGGAGAAGGAATTCGATGAATGTGC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1406784 84 - 108792865 TTCCCACCTAATAATGTAGCAGTTAAAATTAAATGAGATCGCATTTGCAAAATGAGGCTTGGAGAAGGAATTAGGTGAATTTGC i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1329897 84 + 1864846 TTCCCACCTAATAATGTAGCAGTTAAAATTAAATGACATCAAATTTGCAAAACGAGGCTTGGAGAAGGAATTCAGTGAATGTGC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 135525 84 + 287728 GTCCCACCTAATAATGTAGCAGTTAAAATTAAATGAGCTCAAATTTGCAAAACGAGGCTTGGAGAAGGAATTCAGTGAATGTGC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 944929 83 + 5252280 TTCCCACCTGACAACACAGCAACCCAAAGTAAGAGAGATCCAATTTAC-GCACAAGGCTCACAGGAGGTGCTCGAGTAATGTGT i otoGar3.GL873658 I 286 I 831 s dasNov3.JH576208 1744713 83 + 4416731 TTCCTATCTAATAAGATAGCAATGCAATTGAAATGAGATCAAGTTTACAAAGCCAGGTTCAGAGGAGGAACTCAATAAAGGTC- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I a score=521298.000000 s hg38.chr2_KI270774v1_alt 142712 82 + 223625 ATTGTTATTGCTGTGTTGCTGGAAGTGTAGACCTCTGAGAGGGATGTGGGGT-GATTAG------GGAAGCTCAGCAGG---------------------GAGGGAGCAC s panTro5.chr2A 1429723 82 + 111504155 ATTGTTATTGCTGTGTTGCTGGAAGCGTAGACGTCTGAGAGGGATGTGGGGT-GATTAG------GGAAGCTCAGCAAG---------------------GAGGGAGCAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1378824 82 + 114371477 ATTGTTATTGCTGTGTTGCTGGAAGCGTAGACGTCTGAGAGGGATGTGGGGT-GATTAG------GGAAGCTCAGCAAG---------------------GAGGGAGCAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1402841 82 + 1464242 ATTGTTATTGCTGTGTTGCTGGAAGCGTAGACGCCTGAGAGGGATGTGGGGT-GATTAG------GGGAGCTCAGCAAG---------------------GAGGGAGCAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1125739 82 + 81552678 ATTGTTATTGCTGTGTTGCTGGAAGCCTAGACGCCTGAGAGGGATGTGGGGT-GATTAG------GGAAGCTCAGCAAG---------------------GAGGGAGCAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1455062 77 + 108979918 ATTGTAATTGCTGTGTTGCTGGAAGCCTAGCTG-----GAGGGATGCGAGGT-GATTAG------GGAAACTCAGCAAG---------------------GAGGGAGCAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1427494 77 - 111193037 ATTGTAATTGCTGTGTTGCTGGAAGCCTAGCCG-----GAGGGATGTGAGGT-GATTAG------GGAAACTCAGCAAG---------------------GAGGGAGCAC i macFas5.chr13 C 0 I 3 s macNem1.NW_012011978v1 1455363 77 + 3644372 ATTGTAATTGCTGTGTTGCTGGAAGCCTAGCTG-----GAGGGATGTGAGGT-GATTAG------GGAAACTCAGCAAG---------------------GAGGGAGCAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1409884 77 - 10304083 ATTGTAATTGCTGTGTTGCTGGAAGCCTAGCCG-----GAGGGATGTGAGGT-GATTAG------GGAAACTCAGCAAG---------------------GAGGGAGCAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1486325 77 - 107702431 ATTGTAATTGCTGTGTTGCTGGAAGCCTAGCCG-----GAGGGATGTGAGGT-GATTAG------GGAAACTCAGCAAG---------------------GAGGGAGCAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 975461 77 - 2200435 ATTGTAATTGCTGTGTTGCTGGAAGCCTAGCCG-----GAGGGATGTGAGGT-GATTAG------GGAAACTCAGCAAG---------------------GAGGGAGCAT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1406868 73 - 108792865 ATTGTTACTGCTGTTTTGCTG--------GAAGCCTGAGAGGGATG-GGGGT-GATTAG------GGACACTCAGCAAT---------------------GAGGGAGCAC i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1329981 81 + 1864846 ATTGTTACTGCTGTTTTGCTGGTAGCCTAGATGCCTGAGAGGGGTT-GGGGT-GATTAG------GGACGCCCAGCAAG---------------------GAGGGAGCAC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 135609 81 + 287728 GTTGTTACTGCTGTTCTGCTGGAAGCCTAGATGCCTGAGAGGGATG-GGGGT-GATTAG------GGACGCTCGGCAAT---------------------GAGGGAGCAC i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1744796 108 + 4416731 ATGGTTACCGTCATTTCAGTTAAAGCATAGATGCCC--TGGGGACCTGAGATAGAATGGTGGAGAGGGAGCTCAGCGCTCCCACGCTTTCCTCTGGCTCCAAGTGAACAT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e otoGar3.GL873658 945012 831 + 5252280 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I a score=19955.000000 s hg38.chr2_KI270774v1_alt 142794 3 + 223625 GTT s panTro5.chr2A 1429805 3 + 111504155 GTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1378906 3 + 114371477 GTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1402923 3 + 1464242 GTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1125821 3 + 81552678 GTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1455139 3 + 108979918 GTT i rheMac8.chr13 C 0 C 0 s macNem1.NW_012011978v1 1455440 3 + 3644372 GTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1409961 3 - 10304083 GTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1486402 3 - 107702431 GTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 975538 3 - 2200435 GTT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1406941 3 - 108792865 GTT i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1330062 3 + 1864846 CTT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 135690 3 + 287728 GTT i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1744904 3 + 4416731 GTA i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e otoGar3.GL873658 945012 831 + 5252280 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I e macFas5.chr13 1427571 3 - 111193037 I a score=142428.000000 s hg38.chr2_KI270774v1_alt 142797 18 + 223625 -GGGTAGGGAGCTGCACTG s panTro5.chr2A 1429808 18 + 111504155 -GGGTAGGGAGCTGCACTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1378909 18 + 114371477 -GGGTAGGGAGCTGCACTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1402926 18 + 1464242 -GGGTAGGGAGCTGCACTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1125824 18 + 81552678 -GGGTAGGGAGCTGCACTG i nomLeu3.chr19 C 0 I 15 s rheMac8.chr13 1455142 18 + 108979918 -GGGTGGGGAGCTGCACTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1427574 18 - 111193037 -GGGTGGGGAGCTGCACTG i macFas5.chr13 I 3 C 0 s macNem1.NW_012011978v1 1455443 18 + 3644372 -GGGTGGGGAGCTGCACTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1409964 18 - 10304083 -GGGTGGGGAGCTGCACTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1486405 18 - 107702431 -GGGTGGGGAGCTGCACTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 975541 18 - 2200435 -GGGTGGGGAGCTGCACTG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1406944 18 - 108792865 -GGATGGGGAGCTGCGCTG i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1330065 18 + 1864846 -GGATGGGGAGCTGTGCTG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 135693 17 + 287728 -GGAT-GGGAGCTGCGCTG i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1744907 16 + 4416731 GGTGTGGGCAGCTGCA--- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e otoGar3.GL873658 945012 831 + 5252280 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I a score=43804.000000 s hg38.chr2_KI270774v1_alt 142815 7 + 223625 AGAGAAC s panTro5.chr2A 1429826 7 + 111504155 AGAGAAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1378927 7 + 114371477 AGAGAAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1402944 7 + 1464242 AGAGAAC i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1455160 7 + 108979918 AGAGAAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1427592 7 - 111193037 AGAGAAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1455461 7 + 3644372 AGAGAAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1409982 7 - 10304083 AGAGAAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1486423 7 - 107702431 AGAGAAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 975559 7 - 2200435 AAAGAAC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1406962 7 - 108792865 GAAGAAC i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1330083 7 + 1864846 GGAGAAC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 135710 7 + 287728 GGAGGAC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1744923 0 + 4416731 C e colAng1.NW_012118821v1 1407631 4 - 13651311 I e nomLeu3.chr19 1125842 15 + 81552678 I a score=-3771.000000 s hg38.chr2_KI270774v1_alt 142822 1 + 223625 -T s panTro5.chr2A 1429833 1 + 111504155 -T i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1402951 1 + 1464242 -T i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1455167 1 + 108979918 -C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1427599 1 - 111193037 -C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1455468 1 + 3644372 -T i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1409989 1 - 10304083 -C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1486430 1 - 107702431 -C i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 975566 1 - 2200435 -C i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1406969 1 - 108792865 -C i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1330090 1 + 1864846 -T i cebCap1.NW_016107827v1 C 0 I 5 s aotNan1.NW_018513311v1 135717 1 + 287728 -T i aotNan1.NW_018513311v1 C 0 I 5 s dasNov3.JH576208 1744923 1 + 4416731 G- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e otoGar3.GL873658 945012 831 + 5252280 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I e nomLeu3.chr19 1125842 15 + 81552678 I e panPan2.chr2A 1378934 0 + 114371477 C a score=23302.000000 s hg38.chr2_KI270774v1_alt 142823 7 + 223625 ACTCTGT s panTro5.chr2A 1429834 7 + 111504155 ACTCTGT i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1402952 7 + 1464242 ACTCTGT i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1455168 7 + 108979918 ACTCTGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1427600 7 - 111193037 ACTCTGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1455469 7 + 3644372 ACTCTGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1409990 7 - 10304083 ACTCTGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1486431 7 - 107702431 ACTCTGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 975567 7 - 2200435 ACTCTGT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1406970 5 - 108792865 -GTCTT- i calJac3.chr14 C 0 C 0 s dasNov3.JH576208 1744924 7 + 4416731 ACTTTGC i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 135718 5 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330091 5 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I e nomLeu3.chr19 1125842 15 + 81552678 I e panPan2.chr2A 1378934 0 + 114371477 C a score=670.000000 s hg38.chr2_KI270774v1_alt 142830 3 + 223625 GTG- s panTro5.chr2A 1429841 3 + 111504155 GTG- i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1402959 3 + 1464242 GTG- i gorGor5.CYUI01015607v1 C 0 I 32 s macFas5.chr13 1427607 3 - 111193037 GTG- i macFas5.chr13 C 0 C 0 s dasNov3.JH576208 1744931 3 + 4416731 -TGG i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 135718 5 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330091 5 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e calJac3.chr14 1406975 0 - 108792865 C e colAng1.NW_012118821v1 1407631 4 - 13651311 I e manLeu1.NW_012103754v1 975574 0 - 2200435 C e chlSab2.chr14 1486438 0 - 107702431 C e cerAty1.NW_012000820v1 1409997 0 - 10304083 C e macNem1.NW_012011978v1 1455476 0 + 3644372 C e rheMac8.chr13 1455175 0 + 108979918 C e nomLeu3.chr19 1125842 15 + 81552678 I e panPan2.chr2A 1378934 0 + 114371477 C a score=367.000000 s hg38.chr2_KI270774v1_alt 142833 5 + 223625 -GAGGT s panTro5.chr2A 1429844 5 + 111504155 -GAGGT i panTro5.chr2A C 0 C 0 s macFas5.chr13 1427610 5 - 111193037 -GGGGT i macFas5.chr13 C 0 I 9 s dasNov3.JH576208 1744934 5 + 4416731 CAGGG- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 135718 5 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330091 5 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e calJac3.chr14 1406975 0 - 108792865 C e colAng1.NW_012118821v1 1407631 4 - 13651311 I e manLeu1.NW_012103754v1 975574 0 - 2200435 C e chlSab2.chr14 1486438 0 - 107702431 C e cerAty1.NW_012000820v1 1409997 0 - 10304083 C e macNem1.NW_012011978v1 1455476 0 + 3644372 C e rheMac8.chr13 1455175 0 + 108979918 C e nomLeu3.chr19 1125842 15 + 81552678 I e gorGor5.CYUI01015607v1 1402962 32 + 1464242 I e panPan2.chr2A 1378934 0 + 114371477 C a score=5653.000000 s hg38.chr2_KI270774v1_alt 142838 17 + 223625 TGGGCTCCCCTGGAGCT------ s panTro5.chr2A 1429849 17 + 111504155 TGGGCTCCCCTGGAGCT------ i panTro5.chr2A C 0 C 0 s nomLeu3.chr19 1125857 17 + 81552678 TGGGCTCCCCTGGAGCT------ i nomLeu3.chr19 I 15 C 0 s macFas5.chr13 1427624 17 - 111193037 GGGGCTCCCCTGGAGTT------ i macFas5.chr13 I 9 T 70 s dasNov3.JH576208 1744939 23 + 4416731 AGTGCATGTTTGGACAAAAACCT i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 135718 5 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330091 5 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e calJac3.chr14 1406975 0 - 108792865 C e colAng1.NW_012118821v1 1407631 4 - 13651311 I e manLeu1.NW_012103754v1 975574 0 - 2200435 C e chlSab2.chr14 1486438 0 - 107702431 C e cerAty1.NW_012000820v1 1409997 0 - 10304083 C e macNem1.NW_012011978v1 1455476 0 + 3644372 C e rheMac8.chr13 1455175 0 + 108979918 C e gorGor5.CYUI01015607v1 1402962 32 + 1464242 I e panPan2.chr2A 1378934 0 + 114371477 C a score=-30.000000 s hg38.chr2_KI270774v1_alt 142855 22 + 223625 GCACTGAGAGAACCACTGTGTA-- s panTro5.chr2A 1429866 20 + 111504155 GCACTGAGAGAACCACTGTG---- i panTro5.chr2A C 0 C 0 s nomLeu3.chr19 1125874 22 + 81552678 GCACTGAGAGAACCACTCTGCG-- i nomLeu3.chr19 C 0 T 54 s calJac3.chr14 1406975 2 - 108792865 -------------CA--------- i calJac3.chr14 C 0 C 0 s dasNov3.JH576208 1744962 24 + 4416731 TTGTGGGGGAAACCAATCAGAGCA i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 135718 5 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330091 5 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I e manLeu1.NW_012103754v1 975574 0 - 2200435 C e chlSab2.chr14 1486438 0 - 107702431 C e cerAty1.NW_012000820v1 1409997 0 - 10304083 C e macNem1.NW_012011978v1 1455476 0 + 3644372 C e macFas5.chr13 1427641 70 - 111193037 T e rheMac8.chr13 1455175 0 + 108979918 C e gorGor5.CYUI01015607v1 1402962 32 + 1464242 I e panPan2.chr2A 1378934 0 + 114371477 C a score=646.000000 s hg38.chr2_KI270774v1_alt 142877 6 + 223625 GTGGGG s macFas5.chr13 1427571 6 - 111193037 GTTGGG i macFas5.chr13 T 70 C 0 s dasNov3.JH576208 1744986 6 + 4416731 GTTATG i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 135718 5 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330091 5 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e calJac3.chr14 1406977 0 - 108792865 C e colAng1.NW_012118821v1 1407631 4 - 13651311 I e manLeu1.NW_012103754v1 975574 0 - 2200435 C e chlSab2.chr14 1486438 0 - 107702431 C e cerAty1.NW_012000820v1 1409997 0 - 10304083 C e macNem1.NW_012011978v1 1455476 0 + 3644372 C e rheMac8.chr13 1455175 0 + 108979918 C e nomLeu3.chr19 1125896 54 + 81552678 T e gorGor5.CYUI01015607v1 1402962 32 + 1464242 I e panPan2.chr2A 1378934 0 + 114371477 C e panTro5.chr2A 1429886 0 + 111504155 C a score=669.000000 s hg38.chr2_KI270774v1_alt 142883 14 + 223625 TG-GGGGCTCCACCT s nomLeu3.chr19 1125842 14 + 81552678 TG-GAGGTTCCATCT i nomLeu3.chr19 T 54 C 0 s macFas5.chr13 1427577 5 - 111193037 TG-GGG--------- i macFas5.chr13 C 0 C 0 s calJac3.chr14 1406977 14 - 108792865 TG-GGGATTCCGCCT i calJac3.chr14 C 0 C 0 s dasNov3.JH576208 1744992 14 + 4416731 TGTGAGCCTCCATT- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 135718 5 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330091 5 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I e manLeu1.NW_012103754v1 975574 0 - 2200435 C e chlSab2.chr14 1486438 0 - 107702431 C e cerAty1.NW_012000820v1 1409997 0 - 10304083 C e macNem1.NW_012011978v1 1455476 0 + 3644372 C e rheMac8.chr13 1455175 0 + 108979918 C e gorGor5.CYUI01015607v1 1402962 32 + 1464242 I e panPan2.chr2A 1378934 0 + 114371477 C e panTro5.chr2A 1429886 0 + 111504155 C a score=6559.000000 s hg38.chr2_KI270774v1_alt 142897 31 + 223625 TTGGGCTCCCCTGGAGCTGCACTGAGAGAAT s gorGor5.CYUI01015607v1 1402994 30 + 1464242 TTGGGCTCCCCTGGAGCTGCACTGAGAGAA- i gorGor5.CYUI01015607v1 I 32 C 0 s nomLeu3.chr19 1125856 31 + 81552678 GTGGGCTCCCCTGGAGCTGCACTGAGAGAAC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1427582 17 - 111193037 --------------AGCTGCACTGAGAGAAC i macFas5.chr13 C 0 C 0 s calJac3.chr14 1406991 10 - 108792865 ----------TTGGGGCTGC----------- i calJac3.chr14 C 0 C 0 s dasNov3.JH576208 1745006 22 + 4416731 ---------TTGAAAGCTGGTGGATGAGAAC i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 135718 5 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330091 5 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I e manLeu1.NW_012103754v1 975574 0 - 2200435 C e chlSab2.chr14 1486438 0 - 107702431 C e cerAty1.NW_012000820v1 1409997 0 - 10304083 C e macNem1.NW_012011978v1 1455476 0 + 3644372 C e rheMac8.chr13 1455175 0 + 108979918 C e panPan2.chr2A 1378934 0 + 114371477 C e panTro5.chr2A 1429886 0 + 111504155 C a score=5140.000000 s hg38.chr2_KI270774v1_alt 142928 7 + 223625 CACTGTG s panPan2.chr2A 1378934 7 + 114371477 CACTGTG i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1125887 7 + 81552678 CACTCTG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1427599 7 - 111193037 CACTCTG i macFas5.chr13 C 0 C 0 s dasNov3.JH576208 1745028 7 + 4416731 CACTTTG i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 135718 5 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330091 5 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e calJac3.chr14 1407001 0 - 108792865 C e colAng1.NW_012118821v1 1407631 4 - 13651311 I e manLeu1.NW_012103754v1 975574 0 - 2200435 C e chlSab2.chr14 1486438 0 - 107702431 C e cerAty1.NW_012000820v1 1409997 0 - 10304083 C e macNem1.NW_012011978v1 1455476 0 + 3644372 C e rheMac8.chr13 1455175 0 + 108979918 C e gorGor5.CYUI01015607v1 1403024 0 + 1464242 C e panTro5.chr2A 1429886 0 + 111504155 C a score=-1906.000000 s hg38.chr2_KI270774v1_alt 142935 1 + 223625 -C s panTro5.chr2A 1429886 1 + 111504155 -C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1378941 1 + 114371477 -C i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1125894 1 + 81552678 -C i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1427606 1 - 111193037 -T i macFas5.chr13 C 0 C 0 s cebCap1.NW_016107827v1 1330096 1 + 1864846 -C i cebCap1.NW_016107827v1 I 5 C 0 s aotNan1.NW_018513311v1 135723 1 + 287728 -C i aotNan1.NW_018513311v1 I 5 C 0 s dasNov3.JH576208 1745035 1 + 4416731 A- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e otoGar3.GL873658 945012 831 + 5252280 I e calJac3.chr14 1407001 0 - 108792865 C e colAng1.NW_012118821v1 1407631 4 - 13651311 I e manLeu1.NW_012103754v1 975574 0 - 2200435 C e chlSab2.chr14 1486438 0 - 107702431 C e cerAty1.NW_012000820v1 1409997 0 - 10304083 C e macNem1.NW_012011978v1 1455476 0 + 3644372 C e rheMac8.chr13 1455175 0 + 108979918 C e gorGor5.CYUI01015607v1 1403024 0 + 1464242 C a score=1067388.000000 s hg38.chr2_KI270774v1_alt 142936 157 + 223625 GTGGGGGCTCCACCTTTGGGGATCTCCTGGAGTTTCGCTGGTTTGGGCAAGAGCTGGTGAAAAGCAGCCT---TGGAAGAAGGAGGGATTGTTCTTGCAAGTCTGCGGCTGCTATTGGGGTAATTTATGTTT----GTCCAGACAGGTGGG-----ACAGTTGGGGGCC s panTro5.chr2A 1429887 157 + 111504155 GTGGGGGCTCCACCTTTGGGGATCTCCTGGAGTTTCGCTGGTTTGGGCAAGAGCTGGTGAAAAGCAGCCT---TGGAAGAAGGAGGGATCGTTCTTGCAAGTCTGCAGCTGCTATTGGGGTAATTTATGTTT----GTCCAGACAGGCGGG-----ACAGTTGGGGGCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1378942 157 + 114371477 GTGGGGGCTCCACCTTTGGGGATCTCCTGGAGTTTCGCTGGTTTGGGCAAGAGCTGGTGAAAAGCAGCCT---TGGAAGAAGGAGGGATCGTTCTTGCAAGTCTGCAGCTGCTATTGGGGTAATTTATGTTT----GTCCAGACAGGTGGG-----ACAGTTGGGGGCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1403024 126 + 1464242 ------------------------------ACTCTCGCTGGTTTGGGCAAGAGCTGGTGAAAAGCAGCCT---TGGAAGAAGGAGGGATCGTTCTTGCAAGTCTGCAGCTGCTATTGGGGTGATTTGTGTTT----GTCCAGACAGGTGGG-----ACAGTT-GTGGCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1125895 157 + 81552678 GTGGGGTCTCCACCTTTGGGGATCCCCTGGAGTTTCGCTGGTTTGGGCAAGAGCTGGTGAAAAGCAGCCT---TGGAAGAAGGAGGGATTGTTCTCGTAAGTCTGCAGCTGCTATTGGGGTAATTTGTGTTT----GTCTAGACAGGTGGG-----ACAGTTGGGGGCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1455175 160 + 108979918 GTGGGGGTTCCACCTTTGGGGCTCCCCTGGAGTTTAGCTGGTTTGGGCAAGAGCTGGTCAAAAGCAGCC----TGGAAGAAGGAGGGGTTGTTCGTGCAAGTCTGCAGCTGCCATTGGGGTAATCTGTGTTTGCCCGTCCAGACAAGTGGG-----ACAGTTGGGGGCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1427607 160 - 111193037 GTGGGGGTTCCACCTTTGGGGCTCCCCTGGAGTTTAGCTGGTTTGGGCAAGAGCTGGTCAAAAGCAGCC----TGGAAGAAGGAGGGGTTGTTCGTGCAAGTCTGCAGCTGCCATTGGGGTAATCTGTGTTTGCCCGTCCAGACAAGTGGG-----ACAGTTGGGGGCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1455476 160 + 3644372 GTGGGGGTTCCACCTTTGGGGATCCCCTGGAGTTTAGCTGGTTTGGGCAAGAGCTGGTCAAAAGCAGCC----TGGAAGAAGGAGGGGTTGTTCGTGCAAGTCTGCAGCTGCCATTGGGGTAATCTGTGTTTGCCCGTCCAGACAAGTGGG-----ACAGTTGGGGGCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1409997 161 - 10304083 GTGGGGGTTCCACCTTTGGGGCTCCCCTGGAGTTTAGCTGGTTTGGGCAAGAGCTGGTGAAAAGCAGCCT---TGGAAGAAGGAGGGGTTGTTCGTGCAAGTCTGCGGCTGCCATTGGGGTAATCTGTGTTTGCCCGTCCAGACAAGTGGG-----ACAGTTGGGGGCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1486438 160 - 107702431 GTGGGGGTTCCACTTTTGGGGCTCCCCTGGAGTTTAGCCGGTTTGGGCAAGAGCTGGTCAAAAGCAGCC----TGGAAGAAGGAGGGGTTGTTCGTGCAAGTCTGCGGCTGCTATTGGGGTAATCTGTGTTTGCCCGTCCAGACAAGTGGG-----ACAGTTGGGGGCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 975574 161 - 2200435 GTGGGGGTTCCACCTTTGGGGCTCCCCTGGAGTTTAGCTGGTTTGGGCAAGAGCTGGTGAAAAGCAGCCT---TGGAAGAAGGAGGGGTTGTTCGTGCAAGTCTGCGGCTGCCATTGGGGTAATCTGTGTTTGCCCGTCCAGACAAGTGGG-----ACAGTTGGGGGCC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1407001 131 - 108792865 -------------------------CCTGGAGTTTAGCTGGTTTGGGGAAGAGCAGGTGAAAAGCAGCCT---GGGAAGAAGGAGGACTTGTTCTTGCAAGTCTGCAGCTGCTATTAGGGGAAGTTGTGTTT----GTCAAGACAGGAGGG-----ACAGT-GGGGGCC i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1330097 160 + 1864846 GTGGGGGTTCCACCTTTGGGGCTCTCCTGGAGTTTAGCTGGTTTGGGGAAGAGCAGGTGAAAAGCAGCCTGAGGAGAAGGAGGAGGACTCATTCTCACAAGTCTGCAGCTGCTATTGGGGTAATTTGTGTTT----GTCAAGGCAGGAGGG-----ACAGTCGGAGGCC i cebCap1.NW_016107827v1 C 0 I 7 s aotNan1.NW_018513311v1 135724 160 + 287728 GTGGGGGTGCCACCTTTGGGGCTCCCCTGGAGTTTAGCTGGTTTGGGGAAGAGCAGGTGAGAAGCAGCCTGGGAAGAAGGAGGAGAACTCGTTCCTGCAAGTCTGCAGCTGCTATTGGGGTAATTTGTGTTT----GTCAAGACAGGAGGG-----GCAGTTGGGGGCC i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1745036 129 + 4416731 --------------------------AGGAAGTTT--CTACCTTGGGAAGGGGCTACCTGAAGTCTGC-----TAGTGTAAGAAGAAATTCTCCTAGCAATTCTGCAGCT---ATTTGGATAATTTAGATTT----AGTAGGACAGGTGGGGAGGAAGAGTTGGGGGCT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e otoGar3.GL873658 945012 831 + 5252280 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I a score=1944889.000000 s hg38.chr2_KI270774v1_alt 143093 316 + 223625 --------------ACCATC----TGGGTGGGAAGGACACG--GGTAGCCCTGAGGCCAGACAAGGACCCCAGGAAAAGCCCAGCCCTTCAGGGCCACACACACCGTGGGGGAGGTTGGGGGG-CCTCTGGCCAGGGCATCATCCTGGGCATGTTCTGCTGGTATCcagggtcacgtgatggttgtggtgagccccacacac--ccgcccccagagg-ctccttcctccaccca--caatactca--gttatgt----------------ggatggctgcgttcgtataaagataaatatattaatgt---aggttcaaac--gttctttggcctaaatgtttattattttcttctgattttaaa s panTro5.chr2A 1430044 298 + 111504155 --------------ACCATC----TGGGTGGGAAGGACATG--GGTAGCACTGACGCCAGACAAGGACCCCAGGAAAAGCCCAGCCCTTCAGG-------------------AGGTCAGGGG--CCTCTGGCCAGGGCATCATCCTGGGCATGTTCCGCTGATATCcagggtcacgtgatggttgtggtgagccccacacac--ctgcccccagagg-ctccttcctccaccca--caatactcaaagttatat----------------ggatggctgcgttcgtataaagataaatatattaatgt---aggttaaaac--gttctttggcctaaatgtttattattttcttctgattttaaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1379099 298 + 114371477 --------------ACCATC----TGGGTGGGAAGGACATG--GGTAGCACTGAGGCCAGACAAGGACCCCAGGAAAAGCCCAGCGCTTCAGG-------------------AGGTCAGGGG--CCTCTGGCCAGGGCATCATCCTGGGCATGTTCCGCTGATATCcagggtcacgtgatggttgtggtgagccccacacac--ctgcccccagagg-ctccttcctccaccca--caatactcaaagttatat----------------ggatgcctgcgttcgtataaagataaatatattaatgt---aggttaaaac--gttctttggcctaaatgtttattattttcttctgattttaaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1403150 300 + 1464242 --------------ACCACC----TGGGTGGGAAGGACACG--GGAGGCACTGAGGCCAGACAAGGACCCCAGGAAAAGCCCAGCCCTTCAGG-------------------AGGTCAGGGG--CCTCTGGCCAGGGCATCATCCCGGGCATGTTCCACTGATATCcagggccacgtgatggttggagtgagccccacgcac--ctgcccacagggg-ctccttcctccatcca--caatactcaaagttacat----------------ggatagctgcgctcatataaagataaatgtataaatgt---aggttaaaactttttctttggcctaaatgtttattattttcttctgattttaaa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1126052 319 + 81552678 --------------ACCACC----TGGGTGGGAAGGACACT--GGTGGCACTGAGGCCAGACAAGGACCCCAGGAAAAGCACAGCCCTTCAGGGCCACACACACTGTGGGGGAGGTCGGGGG--CCTCCGGCCAGGGCATCATCCAGGGCATGTTCCGCTTATATCcagggccatgtgatggttggggtgagccccacacag--ctgcccacagggc-ctccttcctccatcca--caatactcaaagttacat----------------ggatggctgcgttcgtataaagataaatatattaatgt---aggttaaaaccttttctttggcctaaatgtttactattttcttctgattttaaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1455335 319 + 108979918 --------------ACCACC----TGGGTGGGAAGGACACG--GGTGGCACTGAGGCCAGACAAGAACCCCAGGAAAAGCCCAGCCCTTCAGGGCCACACACACTGTGGGGGAGGTCGGGGG--CCTCCGGCCAGGGCATCATCCCAGGCATGTTCCGCTGATATCcagggccacatgacggttggggtgagccccacacac--ctgcccacagggg-ctccttactccatcca--caataatcaaagctacgt----------------ggatggctatgttcatatagagataaatatattaatgt---aggttaaaactttttctttggcctaaatgtttcttattttcttctgattttaaa i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1427767 319 - 111193037 --------------ACCACC----TGGGTGGGAAGGACACG--GGTGGCACTGAGGCCAGACAAGAACCCCAGGAAAAGCCCAGCCCTTCAGGGCCACACACACTGTGGGGGAGGTCGGGGG--CCTCCGGCCAGGGCATCATCCCAGGCATGTTCCGCTGATATCcagggccacatgatggttggggtgagccccacacac--ctgcccacagggg-ctccttcctccatcca--caataatcaaagctacgt----------------ggatggctgtgttcatatagagataaatatattaatgt---aggttaaaactttttctttggcctaaatgtttcttattttcttctgattttaaa i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1455636 319 + 3644372 --------------ACCACC----TGGGTGGGAAGGACACG--GGTGGCACTGAGGCCAGACAAGAACCCCAGGAAAAGCCCAGCCCTTCAGGGCCACACACACTGTGGGGGAGGTCGGGGG--CCTCCGGCCAGGGCATCATCCCAGGCATGTTCCGCTGATATCcagggccacatgatggttggggtgagccccacacac--ctgcccacagggg-ctccttcctccatcca--caataatcaaagctacgt----------------ggatggctgtgttcatatagagataaatatattaatgt---aggttaaaactttttctttggcctaaatgtttcttattttcttctgattttaaa i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1410158 319 - 10304083 --------------ACCATC----TGGGTGGGAAGGACATG--GGTGGCACTGAGGCCAGACAAGGACCCCAGGAAAAGCCCAGCCCTTCAGGGCCACGCACACTGTGGGGGAGGTCGGGGG--CCTCCGGCCAGGGCATCATCCCAGGCATGTTCCGCTGATATCcagggccacatgatggttggggtgagccccgcacac--ctgcccacaggga-ctccttcctccatcca--caataatcaaagctacat----------------ggatggctgtgttcatatagagataactatattaatgt---aggttaaaactttttctttggcctaaatgtttcttattttcttctgattttaaa i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1486598 318 - 107702431 --------------ACCAGC----TGGGTGGGAAGGACACG--GGTGGCACTGAGGCCAGACAAGGACCCCAGGAAAAGCCCAGCCCTTCAGGGCCACGCACACTGTGGGGGAGGTCGGGGG--CCTCCGGCCAGGGCATCATCCCAGGCATGTTCCGCTGATATCcagggccacgtgacggttggggtgagccccacacac--ctgcccacagggg-ctccttcctccatcca--caatgatcaaagctacat----------------ggatggctgtgttcatagagaggtaaatctattcatgt---agg-taaagctttttctttggcctaaatgtttcttattttcttctgattttaaa i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 975735 319 - 2200435 --------------ACCACC----TGGGTGGGAAGGACATG--GGTGGCACTGAGGCCAGACAAGGACCCCAGGAAAAGCCCAGCCCTTCAGGGCCACGCACACTGTGGGGGAGGTCGGGGG--CCTCCGGCCAGGGCATCATCCCAGGCATGTTTCGCTGATATCcagggccacatgacggttggggtgagccccgcacac--ctgcccacagggg-ctccttcctccatcca--caataatcaaagctacat----------------ggatggctgtgttcatatagagataactatattaatgt---aggttaaaactttttctttggcctaaatgtttcttattttcttctgattttaaa i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1407132 300 - 108792865 --------------ACTACC----TGGGTAGGAAGGACCTG--GGTGACACTGAGGCCAGATAAGGAGCCCAGGAAAAGCCCAGCCCTTCAGGGCCACGCACACCATGGGAGAGGTCAGGGG--CCTCCAGCCAGACCATCATCCCAGACATCT---GCTGACATCCAGGGCCACGTGAGGGTTGGGGTGAGCCCCACACAc--ctgcc-----------------tccatcca--cagtattcaaagttacat----------------ggatggctatgttcatataaagattaatatgttaacgt---gggttaaaactttttctttggcctaaatatttattattttcttctgattttaaa i calJac3.chr14 C 0 C 0 s aotNan1.NW_018513311v1 135884 318 + 287728 --------------ACTACC----TGGGTGGGAAGGACCC---GGTGACACTGAGGTCAGATGAGGACCCCAGGAAAAGCCCAGCCCTTCAGGGCCACGCACACCATGCGGGAGGTCAGGGG--CCTCCGGCCAGGCCATCATCCAGGAAATCTTCCGCTGACATCcagggccacgtgagggttgcggtgagccccacacac--ctgcctccagggg-ctccttcgtccatcca--caatattcaaagttgcat----------------ggatggctgtgttcatataaagattaatatattaatgt---gggttaagactttttctttggcctaaacgtttattattttcttctgattttaaa i aotNan1.NW_018513311v1 C 0 I 284 s dasNov3.JH576208 1745165 347 + 4416731 AAGGTCACATGAGGGCCGCCAAGTAGGGTAGGAAAGTCAAGTTGGAGGGA-TGATGCAAGA--GTCACTGTGGCAGATTCTCAGTCCTTGAGAATTATTCACAACATTAAG-AGTCCAAAGAATCTTGTGGCCAGGCTATCAGTGTGAACATTT---------GCCcagggctctattattgtttt-gtaggctgtaagcacttttgtcttcataggtttcctttctctgtaaaagaaatatttaaaaatatattttgctactgcatacagtatatatggtataggagaaagatgaatatattactgttgcaagttaaaactttttctttggcctaaaggttt----ttttccttcaattttaaa i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330257 7 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I a score=47583.000000 s hg38.chr2_KI270774v1_alt 143409 8 + 223625 gcaagtta s panTro5.chr2A 1430342 8 + 111504155 ataaatta i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1379397 8 + 114371477 ataaatta i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1403450 8 + 1464242 ataaatta i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1126371 8 + 81552678 ataaatta i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1455654 8 + 108979918 ataaatta i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1428086 8 - 111193037 ataaatta i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1455955 8 + 3644372 ataaatta i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1410477 8 - 10304083 ataaatta i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1486916 8 - 107702431 ataaatta i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 976054 8 - 2200435 ataaatta i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1407432 8 - 108792865 ataaagta i calJac3.chr14 C 0 C 0 s dasNov3.JH576208 1745512 8 + 4416731 agaaatta i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 136202 284 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330257 7 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I a score=43281.000000 s hg38.chr2_KI270774v1_alt 143417 10 + 223625 -aagattttgt- s panTro5.chr2A 1430350 10 + 111504155 -aagattttgt- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1379405 10 + 114371477 -aagattttgt- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1403458 10 + 1464242 -aagattttgt- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1126379 10 + 81552678 -aacattttgt- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1455662 10 + 108979918 -agcattttac- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1428094 10 - 111193037 -agcattttac- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1455963 10 + 3644372 -agcattttac- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1410485 10 - 10304083 -aacattttgt- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1486924 9 - 107702431 -aaca-tttgt- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 976062 10 - 2200435 -aacattttgt- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1407440 10 - 108792865 -aacattttGT- i calJac3.chr14 C 0 I 9043 s aotNan1.NW_018513311v1 136486 10 + 287728 -aagattttgt- i aotNan1.NW_018513311v1 I 284 C 0 s dasNov3.JH576208 1745520 12 + 4416731 gcacattttagt i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330257 7 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I a score=982366.000000 s hg38.chr2_KI270774v1_alt 143427 170 + 223625 ggc---cacacttgctcctgt-ggccctaggcactgtggctatggtgccgcctgggtaggctggccctgGGGAAACTGGACTTCCACCT-------------------------------------------------------------------------------GCCTCAG-GGGAGGAATTGGCCTT-TTGTCCCAAGAAAAGTCTCCTCAGAAGAACCCGAGTGGGAGTGAAAAGCAAAAGTGAGTTGG s panTro5.chr2A 1430360 170 + 111504155 gag---cacacttactcctgt-gaccctaggcactgtgactacggtgcctcctgggtaagctggccctgGGGAAACTGGACTTCCACCT-------------------------------------------------------------------------------GCCTCAG-GGGAGGAATTGGCCTT-TTGTCCTAAGAAAAGTCTTCTCAGAAGAACCCGAGTGGGAGTGAAAAGCAAAAGTGAGTTGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1379415 170 + 114371477 gag---cacacttactcctgt-gaccctaggcactgtgactacggtgcctcctgggtaagctggccctgGGGAAACTGGACTTCCACCT-------------------------------------------------------------------------------GCCTCAG-GGGAGGAATTGGCCTT-TTGTCCTAAGAAAAGTCTTCTCAGAAGAACCCGAGTGGGAGTGAAAAGCAAAAGTGAGTTGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1403468 170 + 1464242 gag---cacacttactcctgt-gaccctaggcactgtggctacggtgcctcctgggtaagctggccctgGGGAAACTGGACTTCCACCT-------------------------------------------------------------------------------GCCTCAG-GGGAGGAATTGGCCTT-TTGTCCTAAGAAAAGTCTCCTCAGAAGAACCCGAGTGGGAGTGAAAAGCAAAAGTGAGTTGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1126389 170 + 81552678 gag---cacacttgctcctgt-ggccccaggcactgtggctacggtgcctcctggataagttggccctgGGGAAGCTGGACTTCCACCT-------------------------------------------------------------------------------GCCTTAG-GGGAGAAATTGGCCTG-TTGTCCTAAGAAAAGTCTCCTCAGAAGAACCCGAGTGGGAGTGAAAAGCAAAAGTGAGTTAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1455672 170 + 108979918 gag---cacacttactcctgt-agccgtaggcactgtggctatggtgcctcctggataagttggccttgGGGAAACTGGATTTCCACCC-------------------------------------------------------------------------------ACTTTAG-GAGAGAAATTGGCCTG-TTGTCCTAAGAAAAGTCTCCTCAGAAGAACCTGAGCGGGAGTGAAAAGCAAAAGTGAGTTGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1428104 170 - 111193037 gag---cacacttactcctgt-agccgtaggcactgtggctatggtgcctcctggataagttggccttgGGGAAACTGGACTTCCACCC-------------------------------------------------------------------------------ACTTTAG-GAGAGAAATTGGCCTG-TTGTCCTAAGAAAAGTCTCCTCAGAAGAACCTGAGCGGGAGTGAAAAGCAAAAGTGAGTTGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1455973 170 + 3644372 gag---cacacttactcctgt-agccgtaggcactgtggctatggtgcctcctggataagttggccttgGGGAAACTGGACTTCCACCC-------------------------------------------------------------------------------ACTTTAG-GAGAGAAATTGGCCTG-TTGTCCTAAGAAAAGTCTCCTCAGAAGAACCTGAGCGGGAGTGAAAAGCAAAAGTGAGTTGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1410495 170 - 10304083 gag---cacacttactcctgt-agccataggcactgtggctatggtgcctcctggataagttggccttgGGGAAACTGGACTTCCACCC-------------------------------------------------------------------------------GCTTTAG-GAGAGAAATTGTCCTG-TTGTCCTAAGAAAAGTCTCCTCAGAAGAACCTGAGTGGGAGTGAAAAGCAAAAGTGAGTTGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1486933 170 - 107702431 gag---cacacttactcctgt-agccgtaggcactgtggctatggtgcctcctggataagttggccctgGGGAAACTGGACTTCCACCC-------------------------------------------------------------------------------GCTTTAG-GAGAGAAATTGGCCTG-TTGTCCTAAGAAAAGTCTCCTCAGAAGAACCTGAGCGGGAGTGAAAAGCAAAAGTGAGTTGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 976072 170 - 2200435 gag---cacacttactcctgt-agccataggcactgtggctatggtgcctccaggataagttggccttgGGGAAACTGGACTTCCACCC-------------------------------------------------------------------------------GCTTTAG-GAGAGAAATTGTCCTG-TTGTCCTAAGAAAAGTCTCCTCAGAAGAACCTGAGTGGGAGTGAAAAGCAAAAGTGAGTTGG i manLeu1.NW_012103754v1 C 0 C 0 s aotNan1.NW_018513311v1 136496 167 + 287728 gat---cacacttactcctgt-ggccctaagcactatggctacggtgcctcctggataagtgggccctgGGGACACTGGACTTCCACTG-------------------------------------------------------------------------------GCCTTAG-GGGAGAGATTGGCCTG-TTGTTCTAAGAAAAGCCTCCTC---GGAACCCGAGCGGGAGTGAAAAGCGAGAGTGAGTTGG i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1745532 255 + 4416731 gagccccactataactaatgcaggccggaggcactgtgcctactgtatctaatgggtaagtaggccctgGAGAAATTGGACATCCTTCCAATTTTCAACGGTTAACCTGTCCAGAAATGAGATATACAGAATTGTTGGGAGCAATTTGAGCCTGTGGCAAAGGGGAAAGTCTTAGTGGGAGAAATTAGTCTTATTATTTTAAGAAAAAACTAGTGAGAAGAATCAGAATGGGAATGGAAAACAGAATTGATCTGA i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330257 7 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e calJac3.chr14 1407450 9043 - 108792865 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I a score=212783.000000 s hg38.chr2_KI270774v1_alt 143597 46 + 223625 GCCCCAGGGCCCCCTGCCCCACCGGGCATAAATATACCCACAGGCA-- s panTro5.chr2A 1430530 46 + 111504155 GCCCCAGGGCCCCCTGCCCCACCGGGCATAAATATACCCACAGGCA-- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1379585 46 + 114371477 GCCCCAGGGCCCCCTGCCCCACCGGGCATAAATATACCCACAGGCA-- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1403638 46 + 1464242 GCCCCAGGGCCCCCCGCCCCACCGGGCATAAATATACCCACAGGAA-- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1126559 46 + 81552678 GCCCCAGGGCCCCCTTCCCCACCAGGCATAAATATATCCACAGGCA-- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1455842 46 + 108979918 GCCCCAGGGCCCCCCGCACGACCAGGCATAAACATACCCACAGGCA-- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1428274 46 - 111193037 GCCCCAGGGCCCCCCGCACGACCAGGCATAAACATACCCACAGGCA-- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1456143 46 + 3644372 GCCCCAGGGCCCCCCGCACGACCAGGCATAAACATACCCACAGGCA-- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1410665 46 - 10304083 GCCCCAGGGGCCCCCGCACGACCAGGCATAAACATACTCACAGGCA-- i cerAty1.NW_012000820v1 C 0 I 226 s chlSab2.chr14 1487103 46 - 107702431 GCCCCAGGGCCCCCTGCACGACCAGGCAGAAACATACCCACAGGCA-- i chlSab2.chr14 C 0 I 695 s manLeu1.NW_012103754v1 976242 32 - 2200435 GCCCCAGGGCCCCCTGCACGACCAGGCATAAA---------------- i manLeu1.NW_012103754v1 C 0 C 0 s aotNan1.NW_018513311v1 136663 47 + 287728 G-CCCAGGGCCCCCTGCCCCACCAGGCATGCACACGCCCACAGGAACA i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330257 7 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1745787 0 + 4416731 C e calJac3.chr14 1407450 9043 - 108792865 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I a score=88788.000000 s hg38.chr2_KI270774v1_alt 143643 55 + 223625 TGCACACACTCACAGGCACAGGTGACCGTGACCACCCGTACACCTGTGTGCACGC s panTro5.chr2A 1430576 55 + 111504155 TGCACACACCCACAGGCACAGGTGACCATGACCACCTATACACCTGTGTGTACAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1379631 55 + 114371477 TGCACACACCCACAGGCACAGGTGACCATGACCACCTATACACCTGTGTGTACAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1403684 55 + 1464242 TGCACACACCCACAGGCACAGGTGACTGTGACCACCTATACACGTGTGTGTACAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1126605 44 + 81552678 TGCACGTACCCACAGGCACAGGTGACCGTGACCACCCATACACC----------- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1455888 31 + 108979918 ------------------CA------TGTGACCACCCATACACCTGTGTGTTCAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1428320 31 - 111193037 ------------------CA------TGTGACCACCCATACACCTGTGTGTTCAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1456189 31 + 3644372 ------------------CA------TGTGACCACCCATACACCTGTGTGTTCAC i macNem1.NW_012011978v1 C 0 C 0 s manLeu1.NW_012103754v1 976274 44 - 2200435 ----CATACTCACAGGCACA------TGTGACCACCCATA-ACCTGTGTGTTCAC i manLeu1.NW_012103754v1 C 0 C 0 s aotNan1.NW_018513311v1 136710 37 + 287728 TGCACA------------CA------CGTGACCGCCCACACACTCATGTGCACAC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330257 7 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1745787 0 + 4416731 C e calJac3.chr14 1407450 9043 - 108792865 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I e chlSab2.chr14 1487149 695 - 107702431 I e cerAty1.NW_012000820v1 1410711 226 - 10304083 I a score=224588.000000 s hg38.chr2_KI270774v1_alt 143698 87 + 223625 CCTTGTGc--acacacatgcacacccacc----------cacacc--------------------catacacacacgtgcacacaggcacacgcacctatacatgctcatg-acacacag s panTro5.chr2A 1430631 87 + 111504155 CCTTGTGc--acacacatgcacacccacc----------cacacc--------------------catacacacacgtgcacacaggcacatgcacctatacatgctgatg-acacacag i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1379686 87 + 114371477 CCTTGTGc--acacacatgcacacccacc----------cacacc--------------------catacacacacgtgcacacaggcacatgcacctatacatgctgatg-acacacag i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1403739 87 + 1464242 CCTTGTGc--acacacatgcacacccacc----------cacacc--------------------cacacacacacgtgcacacaggcacatgcacctatacatgctcatg-acacacag i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1126649 78 + 81552678 ---TGTGc--acacacatgcacacc----------------gacc--------------------catacacacatgtgcacacaggcacatgcacctatacatgctcatg-acgcacag i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1455919 110 + 108979918 TCTTGTGcatacatacatgcacacccacc----------cacacccacccacacccatacacacacgtgcacacacgtgcacacaggcacatgcacctaatcatgctcatgcacacacag i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1428351 110 - 111193037 TCTTGTGCATACATacatgcacacccacc----------cacacccacccacacccatacacacacgtgcacacacgtgcacacaggcacatgcacctaatcatgctcatgcacacacag i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1456220 110 + 3644372 TCTTGTGCATACATGCATGcacacccacc----------cacacccacccacacccatacacacacgtgcacacacgtgcacacaggcacatgcacctaatcatgctcatgcacacacag i macNem1.NW_012011978v1 C 0 C 0 s manLeu1.NW_012103754v1 976318 119 - 2200435 CCTTGTGcatacacacatgcacacccacccacacccatgcacacccacccacacccacccacac-catacacacacacgcacacaggcacatgcacctaatcatgctcatgcacacacag i manLeu1.NW_012103754v1 C 0 C 0 s aotNan1.NW_018513311v1 136747 76 + 287728 CCTCGTGC--------------TCCCACC----------CGCACC--------------------CATGCACACATGTGtgcacagccacatacacctatacatgctcatgcacgcgcac i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1745787 15 + 4416731 ------------------------------------------CCC--------------------TATacacacaca------------------------------------------- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330257 7 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e calJac3.chr14 1407450 9043 - 108792865 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I e chlSab2.chr14 1487149 695 - 107702431 I e cerAty1.NW_012000820v1 1410711 226 - 10304083 I a score=77795.000000 s hg38.chr2_KI270774v1_alt 143785 15 + 223625 acc---cacacacacacc s panTro5.chr2A 1430718 15 + 111504155 acc---cacacacacacc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1379773 15 + 114371477 acc---cacacacacacc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1403826 18 + 1464242 accccacacacacacacc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1126727 15 + 81552678 acc---cacacacacacc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1456029 15 + 108979918 acc---cacacacacacc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1428461 15 - 111193037 acc---cacacacacacc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1456330 15 + 3644372 acc---cacacacacacc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1410937 15 - 10304083 acc---catacacacacg i cerAty1.NW_012000820v1 I 226 C 0 s manLeu1.NW_012103754v1 976437 15 - 2200435 atc---cacacacacacc i manLeu1.NW_012103754v1 C 0 I 55 s aotNan1.NW_018513311v1 136823 15 + 287728 acc---catacacacacc i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1745802 12 + 4416731 ------cacacacacaca i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330257 7 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e calJac3.chr14 1407450 9043 - 108792865 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I e chlSab2.chr14 1487149 695 - 107702431 I a score=1596087.000000 s hg38.chr2_KI270774v1_alt 143800 300 + 223625 tgcacacacctcacat-------------------------------------------------------------------------------gcacacaGCTGCTCCAGGATCCTTCTGCTGACATGC------------GGACCCTGTGTAACTCAGGAGTGTATTGGACGAGGGC--AGGGGGGGCCGTGGCGAGGAGCAGGATACTGTGATGCC----CGTGGAGACCCCCGCAGAGGTTC-CGGGGGGTCCGGGCACTGGCTCCT-TCGGGGCTCCCTACTGGATCTCAAGGGAAAGGCGGGTGCTCTCATCAGCCATGTCACTCTCCAGTGTCCTCCTTTCTTTTTAGGGCTCAGTTAGAGTG-AGC-CCGGTCACCCCAGGTACCGTCTCTC s panTro5.chr2A 1430733 299 + 111504155 tgcacacacctcacat-------------------------------------------------------------------------------gcacacaGCTGCTCCAGGATCCTTCTGCTGACATGC------------GGACCCTGTGTAACTCAGGAGTGTATTGGACAAGGAC---GGGGGCGCCGTGGCGAGGAGCAGGATACTGTGATGCC----CATGGAGACCCCCGCAGAGGTTC-CGGGGGGTCCGGGCACTGGCTCCT-TCGGGGCTCCCTACTGGATCTCAAGGGAAAGGTGGGTGCTCTCATCAGCCATGTCACTCTCCAGTGTCCTCCTTTCTTTTTAGGGCTCAGTTAGAGTG-AGC-CCGGTCACCCCAGGTACCGTCTCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1379788 299 + 114371477 tgcacacacctcacat-------------------------------------------------------------------------------gcacacaGCTGCTCCAGGATCCTTCTGCTGACATGC------------GGACCCTGTGTAACTCAGGAGTGTATTGGACAAGGAC---GGGGGCGCCGTGGCGAGGAGCAGGATACTGTGATGCC----CATGGAGACCCCCGCAGAGGTTC-CGGGGGGTCCGGGCACTGGCTCCT-TCGGGGCTCCCTACTGGATCTCAAGGGAAAGGTGGGTGCTCTCATCAGCCATGTCACTCTCCAGTGTCCTCCTTTCTTTTTAGGGCTCAGTTAGAGTG-AGC-CCGGTCACCCCAGGTACCGTCTCTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1403844 298 + 1464242 tgcacacacctcacat-------------------------------------------------------------------------------gcacacaGCTGCTCCAGGATCCTTCTGCTGACATGG------------GGACCCTGTGTAACTCAGGAGTGTATTGGACAAGGGC---GGGGG-GCCGTGGCAAGGAGCAGGATACTGTGATGCC----CGTGGAGACCCCCGCAGAGGTTC-TGGGGGGTCCGGGCACTGGCTCCT-TCGGGGCTCCCTACTGGATCTCAAGGGAAAGGCGGGTGCTCTCATCAGCCATGTCACTCTCCAGTGTCCTCCTTTCTTTTTAGGGCTCAGTTAGAGTG-AGC-CCGGTCACCCCGGGTACCGTCTCTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1126742 300 + 81552678 tgcacacacctcacat-------------------------------------------------------------------------------gcacacaGCTGCTCCAGGATCCTTCTGCTGACATGG------------GGACCCTGTGTAACTCAGTAGTGTATTGGACAAGGGC--AGGGGAGGCCGTGGCGAGGAGCAGGATACTGTGATGCC----CCTGGAGACCCCCGCAGAGGTTC-TGGGGGGTCCGGGCACTGGCTCCT-TCGGGGCTCCCTACTGGATCTCATGGGAAAGGCGAGTGCTCTCATCAGCCATGTCACTCTCCAATCGCCTCCTTTCTTTTTAGGGCTCAGTTATAGTG-AGC-CCGGTCACACCAGGTACCATCTCTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1456044 374 + 108979918 tgcacacacctcacatgcacacc--------------cacacccatacacacccatacacacacgtgcacacaggcacatgcacacacctcacaggcacacaGCTGCTCCAGGCTCCTCCTGCTGCCATGGGGTTCTAAGA--GGACCCTGTGTAACTCAGGAGTGTGTTGGACAAGGGC--AGGGGAGGCCGTGGAGAGGAGCAGGATGCTGTAATGTC----CATGGAGATCCCCGCAGACGTTC-TGGGGGGTCTGGGCACTGGCTCCT-TGGGGGCTCCCTACTGGATCTCA-GGGAAAGGCGGGTGTCCTCATCAGCCATGTCACTCTCCAAGCTCCTCCTTTCTTTTTAGGGCTCAGTTATAGTG-AGC-CCAGTCACACCAGGTACCATCTCTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1428476 378 - 111193037 tgcacacacctcacatgcacacccacccacacccatacacacccatacacacacgtgcaca----------caggcacatgcacacacctcacaggcacaCAGCTGCTCCAGGCTCCTCCTGCTGCCATGGGGTTCTAAGG--GGACCCTGTGTAACTCAGGAGTGTGTTGGACAAGGGC--AGGGGAGGCCGTGGAGAGGAGCAGGATGCTGTAATGTC----CATGGAGATCCCCGCAGACGTTC-TGGGGGGTCCGGGCACTGGCTCCT-TGGGGGCTCCCTACTGGATCTCA-GGGAAAGGCGGGTGTCCTCATCAGCCATGTCACTCTCCAAGCTCCTCCTTTCTTTTTAGGGCTCAGTTATAGTG-AGC-CCAGTCACACCAGGTACCATCTCTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1456345 378 + 3644372 tgcacacacctcacatgcacacccacccacacccacccacacccatacacacacgtgcaca----------caggcacatgcacacacctcacaggcacacAGCTGCTCCAGGCTCCTTCTGCTGCCATGGGGTTCTAAGA--GGACGCTGTGTAACTCAGGAGTGTGTTGGACAAGGGC--AGGGGAGGCCGTGGAGAGGAGCAGGATGCTGTAATGTC----CATGGAGATCCCCGCAGACGTTC-TGGGGGGTCCGGGCACTGGCTCCT-TGGGGGCTCCCTACTGGATCTCA-GGGAAAGGCGGGTGTCCTCATCAGCCATGTCACTCTCCAAGCTCCTCCTTTCTTTTTAGGGCTCAGTTATAGTG-AGC-CCAGTCACACCAGGTACCATCTCTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1410952 308 - 10304083 tgcacacaactcacat-------------------------------------------------------------------------------gcacacAACTGCTCCAGGCTCCTTCTGCTGCCATGGGGTTCTAAGA--GGACCCTGTGTAACTCAGGAGTGTGTTGGACAAGGGC--AGGGGAGGCTGTGGAGAGGAGCAGGATGCTGTAATGTT----CATGGAGACCCCCGCAGACATTC-T-GGGGGTCCGGGCACTAGCTCCT-TCGGGGCTCCCTACTGGATCTCA-GGGAAAGGCGGGTGTTCTCATCAGCCATGTCACTCTCCAAGCTCCTCCTTTCTTTTTAGTGCTCAGTTATAGTG-AGC-CCGGTCACACCAGGTACCATCTCTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1487844 309 - 107702431 TGCACACACCTCACAT-------------------------------------------------------------------------------GCACACAGCTGTTCCAGGCTCCTTCTGCTGCCATGGGGTTCTAAGA--GGACCCTGTGTAACTCAGGAGTGTGTTGGACAAGGGC--AGGGGAGGCCGTGGAGAGGAGCAGGATTCTGTAATGTT----CATGGAGAACCCCGCAGACGTTC-TGGGGGGTCCGGGCACTAGCTCCT-TGGGTGCTTCCTACTGGATCTCA-GGGAAAGGCGGGTGTTCTCATCAGCCATGTCACTCTCCAAGCTCCTCCTTTCTTTTTAGGGCTCAGTTATAGTG-AGC-CCGGTCACGCCAGGTACCATCTCTC i chlSab2.chr14 I 695 C 0 s manLeu1.NW_012103754v1 976507 308 - 2200435 tgcacacaactcacat-------------------------------------------------------------------------------gcacacAGCTGCTCCAGGCTCCTTCTGCTGCCATGGGGTTCTAAGA--GGACCCTGTGTAACTCAGGAGTGTGTTGGACAAGGGC--AGGGGAGGCCGTGGAGAGGAGCAGGATGCTGTAATGTC----CATGGAGACCCCCGCAGACGTTC-T-GGGGGTCCGGGCACTGGCTCCT-TCGGGGCTCCCTGCTGGATCTCA-GGGGAAGGCGGGTGTTCTCATCAGCCATGTCACTCTCCAAGCTCCTCCTTTCTTTTTAGGGCTCAGTTATAGTG-AGC-CCGGTCACACCAGGTACCATCTCTC i manLeu1.NW_012103754v1 I 55 C 0 s aotNan1.NW_018513311v1 136838 312 + 287728 tgcacacgcctcacat-------------------------------------------------------------------------------gcacaCAGCTGCTCCGGGACCCTTCTGCTGGCCTGGGGTGCTAAGAGGAGACCCCGTGTAACTCAGGTGTGTGTCAGACAAGGAC--GGAGGAGGCCATGGCCAGGAGCAGGACGCCGTGATGCC----TGTGGCGCCCTCCACAGAGGTTC-CCGGGGGTCCGGGCGCTGGCTCCT-CTGGGGACCCTTACTGGATCTCAAGGGAAAGGCAGGTGCTCTCATCAGCCACCTCGCTCTCCAGTGTCCTCTTTTCTTTTTAGGGCTCAGTTATTCTG-AGC-CCAGTCACACCAGGTACCATCTCTC i aotNan1.NW_018513311v1 C 0 I 254 s dasNov3.JH576208 1745814 301 + 4416731 ----------------------------------------------------------------------------------------------cacacacacCTCTTCCAAGATCCTTCTGCCAACATGA-GTGCTAATA--GCAGACTGTA-AATCAAGGCACCTGTTGGACAAGGACCCAGGGCAGTTTTTTGTGGGGAGAAGGCTG--ATAGTGTCACATAGTGATGATCTTCAGAGAGGTTCATGGGTAGGGCAAGCCTAGGCCCCTCTTGGAGTTCCCTACTCTGTTTCCAATGAAAAACTTTTGCTCTTATTTGCCATTTTCTCTCCCCATCTCCTTCTCTCCTTTTAGGGCTAATTTATCTTGCAGCTCTAGCCACCCTCATTACTATCTCTC i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330257 7 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e calJac3.chr14 1407450 9043 - 108792865 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I a score=266137.000000 s hg38.chr2_KI270774v1_alt 144100 58 + 223625 TGCCC---TATTTCAACTTTCTCTTCTGGC--TCTTCTGGGCCAG------CCTGTCTTTCGTGGGGCA s panTro5.chr2A 1431032 58 + 111504155 TGCCC---TATTTCAACTTTCTCTTCTGGC--TCTTCTGGGCCAG------CCTGTCTTTCGTGGGGCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1380087 58 + 114371477 TGCCC---TATTTCAACTTTCTCTTCTGGC--TCTTCTGGGCCAG------CCTGTCTTTCGTGGGGCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1404142 58 + 1464242 TGCCC---TATTTCAACTTTCTCTTCTGGC--TCTTCTGGGCCAG------CCTGTCTTTCGTGGGGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1127042 58 + 81552678 TGCCC---TATTTCAACTTTCTGTTCTGGC--TGTTCTGGGCCAG------CCTCTCTTTCACGGGGCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1456418 58 + 108979918 TGCCC---TATTTCAACTTTCTGTTCTGGC--TGTTCTGGGCCAG------CCTATCTTCCATGGTGCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1428854 58 - 111193037 TGCCC---TATTTCAACTTTCTGTTCTGGC--TGTTCTGGGCCAG------CCTATCTTCCATGGTGCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1456723 58 + 3644372 TACCC---TATTTCAACTTTCTGTTCTGGC--TGTTCTGGGCCAG------CCTATCTTCCATGGTGCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1411260 58 - 10304083 TGCCC---TATTTCAACTTTCTGTTCTGGC--TGTTCTGGGCCAG------CCTATCTTCCATGGTGCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1488153 58 - 107702431 TGCCC---TATTTCAACTTTCTGTTCTGGC--TGTTCTGGGCCAG------CCTATCTTCCACGGCACA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 976815 58 - 2200435 TGCCC---TATTTCATCTTTCTGTTCTGGC--TGTTCTGGGCCAG------CCTATCTTCCATGGTGCG i manLeu1.NW_012103754v1 C 0 C 0 s dasNov3.JH576208 1746115 61 + 4416731 -TCCCATATATTTCAACCTCCTGTTGTAGCAGAGTTTCTGGTTAGAGGGCTTCTGTGTTCCA------- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 137150 254 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330257 7 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e calJac3.chr14 1407450 9043 - 108792865 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I a score=185329.000000 s hg38.chr2_KI270774v1_alt 144158 32 + 223625 GGACTGGGGTTGACAGCACTTCCCTTCCACAC s panTro5.chr2A 1431090 32 + 111504155 GGACTGGGGTTGACAGCACTTCCCTTCCACAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1380145 32 + 114371477 GGACTGGGGTTGACAGCACTTCCCTTCCACAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1404200 32 + 1464242 GGACTAGGGTTGACAGCACTTCCCTTCCACAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1127100 32 + 81552678 GCACTGGTGTTGACAGCACTTCCCTTCCACAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1456476 32 + 108979918 GGACTGGTGTTGACGGCACTTCCCTTCCACAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1428912 32 - 111193037 GGACTGGTGTTGACGGCACTTCCCTTCCACAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1456781 32 + 3644372 GGACTGGTGTTGACGGCACTTCCCTTCCACAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1411318 32 - 10304083 GGACTGGTGTTGACGGTACTTCCCTTCCACAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1488211 32 - 107702431 GGACTGGTGTTGACGGTACTTCTCTTCTACAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 976873 32 - 2200435 GGACTGGTGTTGACAGTACTTCCCTTCCACAC i manLeu1.NW_012103754v1 C 0 C 0 s aotNan1.NW_018513311v1 137404 32 + 287728 GGACTGGTGTGGACTGCACTTACATTCCGCAT i aotNan1.NW_018513311v1 I 254 C 0 s dasNov3.JH576208 1746176 32 + 4416731 GAACTGGCAGTCACAGCAGCCTCATTCCACAC i dasNov3.JH576208 C 0 I 1298 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330257 7 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e calJac3.chr14 1407450 9043 - 108792865 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I a score=1182098.000000 s hg38.chr2_KI270774v1_alt 144190 222 + 223625 GGAGCACATGCTTGTGGGA-CCCTGAAGGCAGAGAGGCTGGGGCAGGTGCTGTGG---GCAGCAGGCGGGGAGGGGCTGGACCATCTCAGGCGGGGAGCCTGCAGGGCTTGTTCCCAGGAGCTGAGGAGCT--GACTCCAGACCTCAGGGCTCTGCGCTAAGGTCCCTGGACACAAACTCAGGGCACAGACAAGAGGCAAACCCTCAGGGGACGACTTGAAAATATGG s panTro5.chr2A 1431122 222 + 111504155 AGAGCACATGCTTGTGGGA-CCCTGAAGGCAGAGAGGCTGGGGCAGGCGCTGTGG---GCAGCAGGCGGGGAGGGGCTGGACCATCTCAGGCGGGGAGCCTGCAGGGCTTGTTCCCAGGAGCTGAGGAGCT--GACTCCAGACCTCAGGGCTCTGCGCTAAGGTCCCTGGACACAAACCCAGGGCACGGACAAGAGGCAAACCCTCAGGGGACGACTTGAAAATATGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1380177 222 + 114371477 AGAGCACATGCTTGTGGGA-CCCTGAAGGCAGAGAGGCTGGGGCAGGCGCTGTGG---GCAGCAGGCGGGGAGGGGCTGGACCATCTCAGGCAGGGAGCCTGCAGGGCTTGTTCCCAGGAGCTGAGGAGCT--GACTCCAGACCTCAGGGCTCTGCACTAAGGTCCCTGGACACAAACCCAGGGCACGGACAAGAGGCAAACCCTCAGGGGACGACTTGAAAATATGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1404232 221 + 1464242 GGAGCACATGCTTGTTGGA-CTCTGAAGGCAGAGAGGCTGGGGCAGGTGCTGTGG---GCAGCAGGCGGGGAGGGGCTGGACCATCTCAGGCGGGGAGCCTGGAGGCCTTGTTCCCAGGAGCTGAGGAGCT--GACTCCAGACCTCAGGGCTCTGCGCTAAGGGCCCTGGACACAAACCCAGGGCACGGACGAGAGGCAAACCCTCA-GGGACGACTTGAAAATATGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1127132 222 + 81552678 GGAGCACATGCTTGTGGGA-CCCTGAAGGCAGAAAGGCTGGGGCAGGTGCTGTGG---GCAGCAGGGAGGGAGGGGCTGGACCATCTCAGGTGGGGAGCCTGCAGGGCTTGTTCCCAGGAGCTGAGGAGCT--GACTCCAGACCTCAGGGCTCTGCGCTAAGGGCCCTGGACACAAACCCAGGGCACGAACAAGAGGCAAACCCTCAGGGGAAGACTTGAAAATATGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1456508 223 + 108979918 GGAGCACATGCCTGTGGGG-CCCTGAAGGCAGAGAGGCTGGGGCAGGTGCTGTGG---GCAGCAGGGAGGGAGGGGCTGGACCATCTCAGGT-GGGAGCCTGCAGGGCTTGTTCCAAGGAGCTAAGGAGCTGAGACTCCAGACCTCAGGGCTGTGTGCTAAGGGCTCTGGACACAAACTCAGTGCATGGACAAGAGGCAAACCCTCAGGGGACGACTTGAAAATACGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1428944 223 - 111193037 GGAGCACATGCCTGTGGGG-CCCTGAAGGCAGAGAGGCTGGGGCAGGTGCTGTGG---GCAGCAGGGAGGGAGGGGCTGGACCATCTCAGGT-GGGAGCCTGCAGGGCTTGTTCCAAGGAGCTAAGGAGCTGAGACTCCAGACCTCAGGGCTGTGTGCTAAGGGCTCTGGACACAAACTCAGTGCATGGACAAGAGGCAAACCCTCAGGGGACGACTTGAAAATACGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1456813 222 + 3644372 GGAGCACATGCCTGTGGGG-CCCTGAAGGCAGAGAGGCTGGGGCAGGTGCTGTGG---GCAGCAGGGA-GGAGGGGCTGGACCATCTCAGGT-GGGAGCCTGCAGGGCTTGTTCCAAGGAGCTAAGGAGCTGAGACTCCAGACCTCAGGGCTGTGTGCTAAGGGCTCTGGACACAAACTCAGTGCATGGACAAGAGGCAAACCCTCAGGGGACGACTTGAAAATATGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1411350 223 - 10304083 GGAGAACACGCCTGTGGGG-CCCTGAAGGCAGAGAGGCTGGGGCAGGTGCTGTGG---GCAGCAGGGAGGGAGCAGCTGGACCATCTCAGGC-GGGAGCCTGCAGGGCTTGTTCCAAGGAGCTAAGGAGCTGAGACTCCAGACCTCAGGGCTGTGTGCTAAGGGCTCTGGACACAAACTCAGTGCATGGACAAGAGGCAAACCCTCAGGGGACGACTTGAAAATACGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1488243 223 - 107702431 GAAGCACATGCCTGTGGGG-CCCTGAAGGCAGAGAGGCTGGGGCAGGTGCTGTGG---GCAGCAGGGAGGGAGGGGCTGGACCATCTCAGGC-GGGAGCCTGCAGGGCTTGTTCCAAGAAACTAAGGAGCTGAGACTCCAGACCTCAGGGCTGTGTGCTAAGGGCTCTGGACACAAACTCAGTACATGGACAAGAGGCAAACCCTCAGGGGACGACTTGAAAATACGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 976905 223 - 2200435 GGAGAACATGCCTGTGGGG-CCCTGAAGGCAGAGAGGCTGGGGCAGGTGCTGTGG---GCAGCAGGGAGGGAGGGGCTGGACCATCTCAGGC-GGGAGCCTGCAGGGCTTGTTCCAAGGAGCTAAGGAGCTGAGACTCCAGACCTCAGGGCTGTGTGCTAAGGGCTCTGGACACAAACTCAGTGCATGGACAAGAGGCAAACCCTCAGGGGACGACTTGAAAATACGG i manLeu1.NW_012103754v1 C 0 C 0 s aotNan1.NW_018513311v1 137436 215 + 287728 GGAACACATGCCTGTGGGGACCCTGAAGGCAGAGAGGCCGGGGCAGGTGCTGTGGGCAGCAGCAGGGAGGGAGGGGCTGAGCCAGCTCAGCCGGGGAGGCTGGAGGGCTGGTTCCGAGGAGCTGAGGAGCTGAGACTTCGGACCTAAGGGCTCTGTGCTAAGGT-------------TTCAGTGCACGGAGAAGAGGCAGACACTCACGGGATGATGTGAAAATACGG i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330257 7 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1746208 1298 + 4416731 I e calJac3.chr14 1407450 9043 - 108792865 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I a score=1229713.000000 s hg38.chr2_KI270774v1_alt 144412 241 + 223625 AATCACAAGG--AATTGTtatcttcattctataaagagctcttataaagcaatgagaaaaaaataaacacc-caatggaataaacacccgatgtgaacaagaaaattacaagaaaacccaaatacgtgtgtgtaggtaaacacacacacacacacaca--------cacatagatatcaatgaaagataaatgaac--agcaagatgctgtttttaaacatacagactggaaagaaattatgaaattttaattt s panTro5.chr2A 1431344 237 + 111504155 AATCACAAGG--AATTGTtatcttcattctataaagagctcttataaagcaatgagaaaaaaataaacacc-caatggaataaacacccgatgtgaacaagaaaattacaagaaaacccaaatacGTGTGTGTAGGTAAacacacacacacacacaca------------TAGATATCAATGAAAGATAAATGAAC--AGCAAGATGCTGTTTTTAAACATACAGACTGGAAAGAAATTATGAAATTTTAATTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1380399 241 + 114371477 AATCACAAGG--AATTGTtatcttcattctataaagagctcttataaagcaatgagaaaaaaataaacacc-caatggaataaacacccgatgtgaataagaaaattacaagaaaacccaaatacgtgtgtgtaggtaaacacacacacacacacaca--------cacatagatatcaatgaaagataaatgaac--agcaagatgctgtttttaaacatacagactggaaagaaattatgaaattttaattt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1404453 244 + 1464242 AATCACAAGG--AATTGTtatcttcatcctataaagagctcttataaagcaatgag-aaaaaataaacacc-caatggaataaacacccgatgtgaacaagaaaattacaagaaaacccaaatacGTGTGTGTAGGTAAacacacacacacacacaca----cacacacaTAGATATCAGTGAAAGATAAATGAAC--AGCAAGACGCTGTTTTTAAACATACAGACTGGAAAGAAATCATGAAATTTTAATTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1127354 249 + 81552678 AATCACAGGG--AATTGTtatcttcattctataaagagctcttataaagcaatgagaaaaaaataaacacc-caatggaataaacacccgatgtgaataggaaaattacaagaaaaCCCAAATATGTGTGTGTAGGTAAacacacacacacacacacacacacacacacaTAGATatcaatgaaagataaatgaac--agcaagatgctgtttttaaacatacaaactggaaagaaattacaaaattttaattt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1456731 224 + 108979918 AATGACAAGG--AATTGTtatcttcattctataacgagctcttataaagcaacgag-aaaaaataaacacc-caatggaataaacccctgatgtgaacaggaaaattacaagaaaactcaaatgtgtatgt------------acacacacacacaca------------tagatataaatgaaagataaattaat--ggcaagatgctgtttttaaacatacaaactggaaagaaattatgaaattttaattt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1429167 224 - 111193037 AATGACAAGG--AATTGTtatcttcattctataacgagctcttataaagcaacgag-aaaaaataaacacc-caatggaataaacccctgatgtgaacaggaaaattacaagaaaactcaaatgtgtatgt------------acacacacacacaca------------tagatataaatgaaagataaattaac--agcaagatgctgtttttaaacatacaaactggaaagaaattatgaaattttaattt i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1457035 224 + 3644372 AATGACAAGG--AATTGTtatcttcattctataacgagctcttataaagcaacgag-aaaaaataaacacc-caatgggataaacccctgatgtgaacaggaaaattacaagaaaactcaaatgtgtatgt------------acacacacacaaaca------------tagatataaatgaaagataaattaac--agcaagatgctgtttttaaacatacaaactggaaagaaattatgaaattttaattt i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1411573 226 - 10304083 AATGACAAGG--AATTGTtatcttcattctataacgagctcttataaagcaacgag-aaaaaataaacacc-caatggaataaacccctgatgtgaacaggaaaattacaagaaaactcaaatgtgtatgt----------aaacacacacacacaca------------cagatataaatgaaagataaattaac--agcaagatgctgtttttaaacatacaaactggaaagaaattataaaattttaattt i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1488466 217 - 107702431 AATGACAAGG--AATTGTtatcttcattctataacgggctcttataaagcaacgag-aaaaaataaacacc-caatggaataaacccctgatgtgaacaggaaaattacaagaaaactcaaatgtgtatgt----------aaacacacacacacaca------------cagatataaatgaaagataaattaac--agcaagatgctgtttttaaacatacaaactggaaagaaa---------tttaattt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 977128 224 - 2200435 AATGACAAGG--AATTGTtatcttcattctataacgagctcttataaagcaacgag-aaaaaataaacacc-caatggaataaacccccgatgtgaacaggaaaattacaagaaaactcaaatgtgtatgt------------acacacacacacaca------------cagatataaatgaaagataaattaac--agcaagatgctgtttttaaacatacaaactggaaagaaattatgaaattttaattt i manLeu1.NW_012103754v1 C 0 C 0 s aotNan1.NW_018513311v1 137651 236 + 287728 AATCACAAAG--AATTGTTATCTTCAT-ATATAAAGAGCTCTT------CAGTGAA-AAAAAATAAACA-C-CAGTGGAATAAACACGTGATGTGAACAGGAAAATTACAAGAAAACCCAAATATGTGCGTGTAGGTAAATCcacacacacacacaca----cacacacacaGATACAACTGGAAGATAAATTAAC--AGCAGGACGCTGTTTTTAAACATACAAACCGGAAAGAAGTCATGAAAGTAGAATTT i aotNan1.NW_018513311v1 C 0 I 182 s dasNov3.JH576208 1747506 219 + 4416731 AAACATGAGGAAAAATTCTATCTTTACTTTATAGCAAGATCTTATATTGTAATAGA-AAAAAATGGGCACCACAATAGCCTAGCTATCTCATATAATCAGGAAAATTAAAAAAGAA--AAAATATATATGC----------------AGATAGACACA------------TATGTAT-AACGGGATAtaaattaacttaatgaaatactgtttttcaatttacaaacttgaaaaaat---tgaaattaaaattc i dasNov3.JH576208 I 1298 I 2 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330257 7 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e calJac3.chr14 1407450 9043 - 108792865 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I a score=919544.000000 s hg38.chr2_KI270774v1_alt 144653 186 + 223625 agtgttgttgagggtattgagaaatcatttg-catccatgcattg-ctgtgcaaaagtaaactggtGAATACATTCGGGACACGATGTGACATAAGGTATGAAATGAAATCAGGCCCA------------TTCACAGCACCACAAG-AATCTTCCCT-AGGGACAATGTCCAAACTGCCCTTAAAAGTGGGTGAATATATTA s panTro5.chr2A 1431581 186 + 111504155 AGTGTTGTTCAGGGTATTGAGAAATGATTTG-CATCCATACATGG-CTGTGCAAAAGTAAACTGGTGAATACATTCGGGACACGATGTGACATAAGGTATGAAATGAAATCAAGCCCA------------TTCACACCACCACAAG-AATCTTCCCT-AGGGACAATGTCCAAACTGCCCTTAAAAGTGGGTGAATATATTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1380640 186 + 114371477 agtgttgttcagggtattgagaaatgatttg-catccatacatgg-ctgtgcaaaagtaaactggtGAATACATTCGGGACACGATGTGACATAAGGTATGAAATGAAATCAAGCCCA------------TTCACACCACCACAAG-AATCTTCCCT-AGGGACAATGTCCAAACTGCCCTTAAAAGTGGGTGAATATATTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1404697 187 + 1464242 AGTGTTGTTCAGGGTATTGAGAAATGACTTG-CATCCATACGTTG-CTGTGCAAAAGTAAACTGGTGAATACATTCGGGACACGATGTGACATAAGGTATGAAATGAAATCAAGCCCA------------TTCACACCACCACAAG-AATCTTCCCGAAGGGACAATGTCCAAACTTCCCTTAAAAGTGGGTGAATATGTTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1127603 185 + 81552678 agtgttgttgagggtattgagaaatgatttg-catccatacattg-ctgtgcaaaagtaaactggtgaatacattcgggacacgatgtgacat-agatatgaaatgaaatcaagccca------------ttcacaccaccacaag-aatttttcct-aaggacaatgtcaaaactgcccatagaagtgggtgaatatattt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1456955 186 + 108979918 agtgtcgttgagggtattgagaaatgatttg-tatccatacattg-ctgtgcaaatgtaaattggtgaatgcatttgggacacgatgtgacataaaatatgaaatgAAATCAAGCCCA------------TTCACACCACCACAAG-AATCTTTCCT-AGGGACAATGTCAAAACTGCCCATAAAAGTGGGTGAATATATTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1429391 186 - 111193037 agtgtcgttgagggtattgagaaatgatttg-tatccatacattg-ctgtgcaaatgtaaattggtgaatgcatttgggacacgatgtgacataaaatatgaaatgAAATCAAGCCCA------------TTCACACCACCACAAG-AATCTTTCCT-AGGGACAATGTCAAAACTGCCCATAAAAGTGGGTGAATATATTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1457259 186 + 3644372 agtgtcgttgagggtattgagaaatgatttg-tatccatacattg-ctgtgcaaatgtaaattggtgaatgcatttgggacacgatgtgacataaaatatgaaatgAAATCAAGCCCA------------TTCACACCACCACAAG-AATCTTTCCT-AGGGACAATGTCAAAACTGCCCATAAAAGTGGGTGAATATATTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1411799 186 - 10304083 agtgtcgttgagggtattgagaaatgatttg-catccatacattg-ctgtgcaaatgtaaattggtgaatgcatttgggacacgatgtgacataaaatatgaaatgAAATCAAGCCCA------------TTCACACCACCACAAG-TATCTTTCCT-AGGGACAATGTCAAAACTGCCCATAAAAGTGGGTGAATATATTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1488683 186 - 107702431 agtgtcgttgagggtattgagaaattatttg-catccatacattg-ctgtgcaaatgtaaattggtGAATGCATTTGGGACACGATGTGACATAAAATATGAAATGAAATCAAGCCCA------------TTCACATCACCATAAG-AATCTTTCCT-AGGGACAATGTCAAAACTGCCCATAAAAGTGGGTGAATATATTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 977352 186 - 2200435 agtgtcgttgagggtattgagaaatgatttg-catccatacattg-ctgtgcaaatgtaaattggtgaatgcatttgggacacgatgtgacataaaatatgaaatgAAATCAAGCCCA------------TTCACACCACCACAAG-AATCTTTCCT-AGGGACAATGTCAAAACTGCCCATAAAAGTGGGTGAATATATTT i manLeu1.NW_012103754v1 C 0 C 0 s dasNov3.JH576208 1747727 199 + 4416731 agagtttttgaggatttagcaaaatgattcaccccccatacaatatttgaacaaatgaaaattggttaaaactttcaggaggcaatgtggcataaaccataaaa--aaatgaataccccccctctttttttttttaccactactagcgatctatcca-agggaaaatagtggagaagcccataaaaataggtatatatactt i dasNov3.JH576208 I 2 C 0 e aotNan1.NW_018513311v1 137887 182 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330257 7 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e calJac3.chr14 1407450 9043 - 108792865 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I a score=347875.000000 s hg38.chr2_KI270774v1_alt 144839 58 + 223625 GTTTGTCACGATTGTTTATATCACCAAAATACT-GAAAAACTTTAAACGTTGATCACAG s panTro5.chr2A 1431767 58 + 111504155 GTTTGTCACAATTGTTTATATCACCAAAATACT-GAAAAACTTTAAACGTTGATCACAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1380826 58 + 114371477 GTTTGTCACAATTGTTTATATCACCAAAATACT-GAAAAACTTTAAACGTTGATCACAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1404884 58 + 1464242 GTTTGTCACAATTGTTTATATCACCAAAATACT-GAAAAACTTTAAACGTTGATCACAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1127788 58 + 81552678 gtttgtcacaattgtttatgtcaccaaaatact-gaaaaattttaaatgttgatcacag i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1457141 57 + 108979918 GTTTGTCACAATT-TTTATATCACCAAAATACT-GGAAAACTTTAAACACTGATCACAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1429577 57 - 111193037 GTTTGTCACAATT-TTTATATCACCAAAATACT-GGAAAACTTTAAACACTGATCACAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1457445 57 + 3644372 GTTTGTCACAATT-TTTATATCACCAAAATACT-GGAAAACTGTAAACACTGATCACAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1411985 57 - 10304083 GTTTGTCACAATT-TTTATATCACCAAAATACT-GGAAAACTTTAAACACTGATCACAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1488869 57 - 107702431 GTTTGTCACTATT-TTTATATCTCCAAAATACT-GGAAAACTTTAAACACTGATCACAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 977538 57 - 2200435 GTTTGTCACAATT-TTTATATCACCAAAATACT-GGAAAACTTTAAACACTGATCACAG i manLeu1.NW_012103754v1 C 0 C 0 s aotNan1.NW_018513311v1 138069 58 + 287728 GTTTGTCACGATTGTTTATATCACCAAAATATC-GAAAAACTTTAAATGTTGATCACAG i aotNan1.NW_018513311v1 I 182 I 1258 s dasNov3.JH576208 1747926 59 + 4416731 gttcatcacaattgtttatatcaccaaactgttgggaaaattttaaatatTGATCATAG i dasNov3.JH576208 C 0 I 2 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330257 7 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e calJac3.chr14 1407450 9043 - 108792865 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I a score=114305.000000 s hg38.chr2_KI270774v1_alt 144897 22 + 223625 GCTATGAGCATGAGAAACACAA s panTro5.chr2A 1431825 22 + 111504155 GCTATGAGCATGAGAAACACAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1380884 22 + 114371477 GCTATGAGCATGAGAAACACAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1404942 22 + 1464242 GCTATGAGCATGAGAAACACAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1127846 22 + 81552678 gctatgagcatgagaaatacaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1457198 22 + 108979918 GCTAGGAGCATGAGAAACACAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1429634 22 - 111193037 GCTAGGAGCATGAGAAACACAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1457502 22 + 3644372 GCTAGGAGCATGAGAAACACAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1412042 22 - 10304083 GCTAGGAGCATGAGAAACACAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1488926 22 - 107702431 GCTAGGAGCATGAGAAACACAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 977595 22 - 2200435 GCTAGGAGCATGAGAAACACAA i manLeu1.NW_012103754v1 C 0 C 0 s dasNov3.JH576208 1747987 22 + 4416731 GATAAAATCATAAAACATATAA i dasNov3.JH576208 I 2 C 0 e aotNan1.NW_018513311v1 138127 1258 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330257 7 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e calJac3.chr14 1407450 9043 - 108792865 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I a score=2275332.000000 s hg38.chr2_KI270774v1_alt 144919 382 + 223625 ---GCAACTTTAGACAATCATGTTATACAGTGATATTATGGAAATGGTAAAATGTTGCCCAGCTTAGTAAAATTTTAGATGATATTGTACTTGTCACTTTTCTTATTTCAAAATGTTCATTATTGAGCATATATTATCTTTGTACTTAGAGAAAAATAACAATAAAATTAT---------------------TTGTAAACAATTTTAAAAATAAAAGGCAAGACC---ACATCTGGCAGGGAGGACACCTG-CGTGCCCGTGGGTGAGAAC-GTGGGAGAGGCC--CCAGGGTGGGTCTCCAGGGCACTTTCCAGGGCTCTTGGTGTCAG--GCATGAACCTCCTGGCTTGCAGTTAAGAGTGTCCATCAATTATTCAGATCCTGTCCATCCCCAGGGCAGCCTTCAGTAGTTGA s panTro5.chr2A 1431847 382 + 111504155 ---GCAACTTTAGACAATCATGTTATACAGTGATATTATGGAAATGGTGAAATGTTGCCCAGCTTAGTAAAATTTTAGATGATATTGTACTTGTCACTTTTCTTATTTCAAAATGTTCATTATTGAGCATATATTATCTTTGTACTTAGAGAAAAATAACAACAAAATTAT---------------------TTGTAAACAATTTTAAAAATAAAAGGCAAGACC---ACATCTGGCAGGGAGGACACCTG-CGTGCCCGTGGGTGAGAAC-GTGGGAGAGGCC--CCAGGGTGGGTCTCCAGGGCACTTTCCAGGGCTCTTGGTGTCAG--GCATGAACCTCCTGGCTTGCAGTTAAGAGTGTCCGTCAATTATTCAGATCCTGTCCATCCCCAGGGCAGCCTTCAGTAGTTGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1380906 382 + 114371477 ---GCAACTTTAGACAATCATGTTATACAGTGATATTATGGAAATGGTGAAATGTTGCCCAGCTTAGTAAAATTTTAGATGATATTGTACTTGTCACTTTTCTTATTTCAAAATGTTCATTATTGAGCATATATTATCTTTGTACTTAGAGAAAAATAACAACAAAATTAT---------------------TTGTAAACAATTTTAAAAATAAAAGGCAAGACC---ACATCTGGCAGGGAGGACACCTG-CGTGCCCGTGGGTGAGAAC-GTGGGAGAGGCC--CCAGGGTGGGTCTCCAGGGCACTTTCCAGGGCTCTTGGTGTCAG--GCATGAACCTCCTGGCTTGCAGTTAAGAGTGTCCGTCAATTATTCAGATCCTGTCCATCCCCAGGGCAGCCTTCAGTAGTTGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1404964 382 + 1464242 ---GCAACTTTAGATAATCATGTTATACAGTGATATTATGGAAATGGCGAAATGTTGCCCAGCTTAGTAAAATTTTAGATCATATTCTACTTGTCACTTTTCTTATTTCAAAATGTTCATTATTGAGCATATATTATCTTTGTACTTAGAGaaaaataacaataaaattat---------------------ttgtaaataattttaaaaataaaaGGCAAGACC---ACATCTGGCAGGGAGGACACCTG-CGTGCCCGTGGGTGAGAAC-GTGGGAGAGGCC--CCAGGGTGGGTCTCCAGGGCACTTTCCAGGGCTCTTGGTGTCAG--GCATGAACCTCCTGGCTTGCAGTTAAGAGTGTCTGTCAATTATTCAGATCCTGTCCATCCCCAGGGCAGCCTTCAGTAGTTGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1127868 381 + 81552678 ---gcaactttaggcaatcatgttatacagtgatattatggaaatggtgaaaTGTTGCCCGGGTTAGTAAAATTTTAGATGATATTCTACTTGTCAC-TTTCTTATTTCAAAATGTTCATTATTGAGCATATATTATCTTTGTACTTAGAGAAAAATAACAATAAAATTAT---------------------TTGTAAACAATTTTAAAAATAAAAGGCAAGACC---ACATCTGGCAGGGAGGACACCTG-CGTGCCCACGGGTGAGAAT-GTGGGAGAGGCC--CCAGGGTGGGTCTCCAAGGCACTTTCCAGGGCTCTTTGTGTCAG--GCCTAAGCCCCCTGGCTTGCAGTTAACAGCGTCCATCAATTATTCAGATCCTGTCCATCCCCAGGGCAGCTTTCAGTAGTTGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1457220 382 + 108979918 ---GCAACTTTAAACAATCATGTTATACAGTGACACTATGGAAATGGTGAAATGTTTCCCGGGTTAGTAAAATTTTAGATGATATTCTCCTTGTCACTTTTCTTATTTCAAAATGTTCATTATTGAGCATATATTATCTTTGTACTTAGAGAAAAATAACAATTAAATTAT---------------------TTGTAAACAATTTTTAAAATAAAAGGCAAGACC---ACATCTGGCAGAGAGGACACCTG-TGTGCCTGTGGGTGAGAAT-GTGGGAGAGGCC--CCAGGGTGGGTCTCCAAGGCACTTTCCAGGGCTCTTGGTCTCGG--GCGCGAGCCTCCTGGCTTGTAGTTAAGAGTGTTCGTCAATTATCCAGATCCTGTCCATCCCCAGGGCAGCCTTCAGTAGTTGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1429656 382 - 111193037 ---GCAACTTTAAACAATCATGTTATACAGTGACACTATGGAAATGGTGAAATGTTTCCCGGGTTAGTAAAATTTTAGATGATATTCTCCTTGTCACTTTTCTTATTTCAAAATGTTCATTATTGAGCATATATTATCTTTGTACTTAGAGAAAAATAACAATTAAATTAT---------------------TTGTAAACAATTTTTAAAATAAAAGGCAAGACC---ACATCTGGCAGAGAGGACACCTG-TGTGCCTGTGGGTGAGAAT-GTGGGAGAGGCC--CCAGGGTGGGTCTCCAAGGCACTTTCCAGGGCTCTTGGTCTCGG--GCGCGAGCCTCCTGGCTTGTAGTTAAGAGTGTTCGTCAATTATCCAGATCCTGTCCATCCCCAGGGCAGCCTTCAGTAGTTGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1457524 382 + 3644372 ---GCAACTTTAAACAATCATGTTATACAGTGACACTATGGAAATGGTGAAATGTTTCCCGGGTTAGTAAAATTTTAGATGATATTCTCCTTGTCACTTTTCTTATTTCAAAATGTTCATTATTGAGCATATATTATCTTTGTACTTAGAGAAAAATAACAATTAAATTAT---------------------TTGTAAACAATTTTTAAAATAAAAGGCAAGACC---ACATCTGGCAGAGAGGACACCTG-TGTGCCTGCGGGTGAGAAT-GTGGGAGAGGCC--CCAGGGTGGGTCTCCAAGGCACTTTCCAGGGCTCTTGGTCTCGG--GCGCGAGCCTCCTGGCTTGTAGTTAAGAGTGTTCGTCAATTATCCAGATCCTGTCCATCCCCAGGGCAGCCTTCAGTAGTTGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1412064 382 - 10304083 ---GCAACTTTAAACAATCATGTTATACAGTGACGCTATGGAAATGGTGAAATGTTTCCCGGGTTAGTAAAATTTTAGATGATATTCTCCTTGTCACTTTTCTTATTTCAAAATGTTCATTATTGAGCATATATTATCTTTGTACTTAGAGAAAAATAACAATTAAATTAT---------------------TTATAAACAGTTTTTAAAATAAAAGGCAAGACC---ACATCTGACAGAGAGGACACCTG-TGTGCCTGTGGGTGAGAAT-GTGGGAGAGGCC--CCAGGGTGGGTCTCCAAGGCACTTTCCAGGGCTCTTGGTCTCGG--GCACGAGCCTCCTGGCTTGTAGTTAAGAGTGTTCGTCAATTATCCAGATCCTGTCTATCCCCAGGGCAGCCTTCAGTAGTTGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1488948 382 - 107702431 ---GCAACTTTAAACAATCATGTTATACAGTGACACTATGGAAATGGTGAAATGTTTCCCGGGTTAGTAAAATTTTAGATGATATTCTCCTTGTCACTTTTCTTATTTCAAAATGTTCATTATTGAGCATATATTATCTTTGTACTTAGAGAAAAATAACAATTAAATTAT---------------------TTGTAAACAATTTTTTAAATAAAAGGCAAGACC---ACATCTGGCAGAGAGGACACCTG-TGTGCCTGTGGGTGAGAAT-GTGAGAGAGGCC--CCAGGGTGGGTCTCCAAGGCACTTTCCAGGGCTCTTGGTCTCGG--GCACGAACCTCCTGGCTTGTAGTTAAGAGTGTTCGTCAATTATCCAGATCCTGTCCATCCCCAGGGCAGCCTTCAGTAGTTGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 977617 382 - 2200435 ---GCAACTTTAAACAATCATGTTATACAGTGACACTATGGAAATGGTGAAATGTTTCCCAGGTTAGTAAAATTTTAGATGATATTCTCCTTGTCACTTTTCTTATTTCAAAATGTTCATTATTGAGCATATATTATCTTTGTACTTAGAGAAAAATAACAATTAAATTAT---------------------TTGTAAACAATTTTTAAAATAAAAGGCAAGACC---ACATCTGGTAGAGAGGACACCTG-TGTGCCTGTGGGTGAGAAT-GTGGGAGAGGCC--CCAGGGTGGGTCTCCAAGGCACTTTCCAGGGCTCTTGGTCTCGG--GCACGAGCCTCCTGGCTTGTAGTTAAGAGTGTTCATCAATTATCCAGATCCTGTCCATCCCCAGGGCAGCCTTCAGTAGTTGA i manLeu1.NW_012103754v1 C 0 C 0 s aotNan1.NW_018513311v1 139385 379 + 287728 ---GCAACTTTAAGCAATCATGCTATACAGTGAGATTATGGAAATGGTGAAATGTTTCCCGGGTTCATAAGATTTTAGATGATATTCTCCTGGTCACTTTTCCTATTTCAAAATGTTCATCATTGAGCATATATTATCTTTGTACTTAGAGGTAAATAACAAGAAAATTAT---------------------TTGTAAATGATTTAAAAAATAAAAGGCAAGACC---ACATCTGGCAGAGAGGACATCTG-AGTGCCCGTGGGTGAGAAT-GTG-GAGAGGCC--CCAGGGCCGGTGGCACAGGCACTTTCCAGGGCTCTCGGCGTCGG--GCACGGGCCTCCTGACTTGCAGTAAAGCGCGATCGTCAATTATTCAGA-CCCATCCAT-CCCAGGGCAGCCTTCGGTAGCTGA i aotNan1.NW_018513311v1 I 1258 C 0 s dasNov3.JH576208 1748009 406 + 4416731 AATACAACTTCAAATAATCATGTTATAAA---ACAGTATTGATATAGTGAAATGTTTCTT-GATGAGT---ATTTTAGATGATTATTTCCTTGTTGCTTTTCTGTTTTTCAGATGTTCATTATTAAGCATATATTACTTTTGTAATTATAGA-AAATAAAAATAAAATCATTCCTAAATCATTTTCTATAACTTCTAAATTATTTTTTAAATGAAAGCCAAGAATAAAACATCCAGCAGAAAGAACATCTGTTGTGCCAATTGATGAGAACAACAGGAGAGACTAGCAAGGCTTATCCTTCTGGAAATTCTTCTTGGA-CTTGGCATTGGAAGAATTTATCTACATGCTTGTAGTTAGTTGCTTTGCTTAATTATTCAAATCTTCTCTATCTCTGGAGCAGCATGTAGTAGTTAT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330257 7 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e calJac3.chr14 1407450 9043 - 108792865 I e colAng1.NW_012118821v1 1407631 4 - 13651311 I a score=2987807.000000 s hg38.chr2_KI270774v1_alt 145301 426 + 223625 GTGATTGAGCTAACAGTCACTCCAGTGAGATGAAAAATATACCGTATACTCTAGGAGTAGCTCCATAAACCCAATAGATGACACATCATAAATCAG--TGCTTTTAAATGTTTGATGTCCTTTACACTCAAAGCATCCAGTTTGGTCTCTGAGTATTTACGGTGGA---------------GTGAGAGGGT-GGAAG----TTCTTAGTGAGCTTGGAGCAAGTTGGGACTTTTGAATCCCAAAGCAAAACAGAAAATGATCCACACAATTTATCATATCTATGTTTATTCAGTTTTCCTAAGAGAAACATGTTTCCAGCAACTACACGAGACTATAAATTAAAGTG-----TTTTGAGTCTCTGACTACTGA-TCACTCAGCCC----------AGGGAGCTGTGAGA-GCTTT-GCAGCATCCTCTATTTT-AGGACTGGGCTTTTCTTCATGACCTTGCTCCTT s panTro5.chr2A 1432229 426 + 111504155 GTGATTGAGCTAACAGTCACTCCGGTGAGATGAAAAATATACGGTATACTCTAGGAGTAGCTCCATAAACCCAGTAGATGACACATCATAAATCAG--TGCTTTTAAATGTTTGATGTCCTTTACACTCAAAGCATCCAGTTTGGTCTCTGAGTATTTACGGTGGA---------------GTGGGAGGGT-GGAAG----TTCTTAGTGAGCTTGGAGCAAGTTGGGACTTTTGAATCCCAAAGCAAAACAGAAAATGATCCACACAATTTATCATATCTATGTTTATTCAGTTTTCCTAAGGGAAACATGTTTCCAGCAACTACACGAGACTATAAATTAAAGTG-----TTTTGAGTCTCTGACTACTGA-TCACTCAGCCC----------AGGGAGCTGTGAGA-GCTTC-GCAGCATCCTCTATTTT-AGGACTGGGCTTTTCTTCATGACCTTGCTCCTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1381288 426 + 114371477 GTGATTGAGCTAACAGTCACTCCAGTGAGATGAAAAATATACGGTATACTCTAGGAGTAGCTCCATAAACCCAGTAGATGACACATCATAAATCAG--TGCTTTTAAATGTTTGATGTCCTTTACACTCAAAGCATCCAGTTTGGTCTCTGAGTATTTACGGTGGA---------------GTGGGAGGGT-GGAAA----TTCTTAGTGAGCTTGGAGCAAGTTGGGACTTTTGAATCCCAAAGCAAAACAGAAAATGATCCACACAATTTATCATATCTATGTTTATTCAGTTTTCCTAAGGGAAACATGTTTCCAGCAACTACACGAGACTATAAATTAAAGTG-----TTTTGAGTCTCTGACTACTGA-TCACTCAGCCC----------AGGGAGCTGTGAGA-GCTTC-GCAGCATCCTCTATTTT-AGGACTGGGCTTTTCTTCATGACCTTGCTCCTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1405346 426 + 1464242 GTGATTGAGCTAACAGGCACTCCAGTGAGATGAAAAATATACGGTATACTCTAGGAGTAGCTCCATAAACCCAATAGATGACACATCATAAATCAG--TGCTTTTAAATGTTTGATGTCCTTTACACTCAAAGCATCCAGTTTGGTCTCTGAGTATTTACGGTGGA---------------GTGGGAGGGT-GGAAG----TTCTTAGTGAGCTTGGAGTAAGTTGGGACTTTTGAATCCCAAAGCAAAACAGAAAATGATCCACACAATTTATCATATCTATGTTTATTCAGTTTTCCTAAGGGAAACATGTTTCCAGCAACTACACGAGACTATAAATTAAAGTG-----TTTTGAGTCTCTGACTACTGA-TCACTCAGCCC----------AGGGAGCTGTGAGA-GCTTC-GCAGCATCCTCTATTTT-AGGACTGGGCTTTTCTTCATGACCTTGCTCCTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1128249 427 + 81552678 GTGATTGAGCTAACAGTCACTCCAGTGAGATGAAAAATATACGGTATACTCTAGGAGTAGCTCCATAAACCCGACAGATGACACATCATAAATCAG--TGCTTTTAAATGTTTGATGTCCTTTACACTCAAAGCATCCAGTTTGGTCTCTGAGTATTTACGGTGGA---------------GTGCGAGGGT-GGAAG----TTCTTCGTGAGCTTGGAGCAAGTTGGGACTTTTGAATCCCAAAGCAAAACAGAAAATGATCCACACAATTTATCATATCTATGTTTGTTCAATTTTCCTAAGAGAAACATGTTTCCAGCAACTACACGAGACTATAAATTAAAGTG-----TTTTGAGTCTCTGACTACTGACTCACTCAGCCC----------AGGGAGCCGTGAGA-GCTTC-GCAGCATCCTCTATTTT-AGGACTGGGCTTTTCTTCATGACCTTGCTCCTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1457602 437 + 108979918 GTGATTGAGCTAATAGTCACTCCAGTGAGATGAAAAATATATGGTATACTCTAGGAGTAGCTCCGTAAACCCAGTAGATGACACATCATAAATCAG--TGCTTTTAAATGTTTGATGTCCTTTGTACTGAAACCATCCAGTTTGGTCTCTGAGTATTTACGGTGGA---------------GTGTGAGGGT-AAAAG----TTCTTAGTGAGCTTGGAGCAAGTTAGGACTTTAGAATCTCAAAGCAAAACAGAAAATGATCCACACAATTTATCATATCTATGTTTATTCAATTTTCCTTAGAGAAACATGTTTCCAGCAACTGCATGAGACTATAAATTAAAGTG-----TTTTGAGTCTCTGACTACTGCCTCACTCAGCCCAGTAGCTTCTAGGGAGCTGTGAGA-GCTTC-GCAGCATCCTCTATTTT-AGGACCAGGCTTTTCTTCATGCCCTCGCTCCTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1430038 437 - 111193037 GTGATTGAGCTAATAGTCACTCCAGTGAGATGAAAAATATATGGTATACTCTAGGAGTAGCTCCGTAAACCCAGTAGATGACACATCATAAATCAG--TGCTTTTAAATGTTTGATGTCCTTTGTACTGAAACCATCCAGTTTGGTCTCTGAGTATTTACGGTGGA---------------GTGTGAGGGT-AAAAG----TTCTTAGTGAGCTTGGAGCAAGTTAGGACTTTAGAATCTCAAAGCAAAACAGAAAATGATCCACACAATTTATCATATCTATGTTTATTCAATTTTCCTTAGAGAAACATGTTTCCAGCAACTGCATGAGACTATAAATTAAAGTG-----TTTTGAGTCTCTGACTACTGCCTCACTCAGCCCAGTAGCTTCTAGGGAGCTGTGAGA-GCTTC-GCAGCATCCTCTATTTT-AGGACCAGGCTTTTCTTCATGCCCTCGCTCCTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1457906 437 + 3644372 GTGATTGAGCTAATAGTCACTCCAGTGAGATGAAAAATATATGGTATACTCTAGGAGTAGCTCCGTAAACCCAGTAGATGACACATCATAAATCAG--TGCTTTTAAATGTTTGATGTCCTTTGCACTGAAACCATCCAGTTTGGTCTCTGAGTATTTACGGTGGA---------------GTGTGAGGGT-AAAAG----TTCTTAGTGAGCTTGGAGCAAGTTAGGACTTTAGAATCTCAAAGCAAAACAGAAAATGATCCACACAATTTATCATATCTATGTTTATTCAATTTTCCTTAGAGAAACATGTTTCCAGCAACTGCATGAGACTATAAATTAAAGTG-----TTTTGAGTCTCTGACTACTGCCTCACTCAGCCCAGTAGCTTCTAGGGAGCTGTGAGA-GCTTC-GCAGCATCCTCTATTTT-AGGACCAGGCTTTTCTTCATGCCCTCGCTCCTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1412446 437 - 10304083 GTGATTGAGCTAACAGTCACTCCAGTGAGATGAAAAATATATGGTATACTCTAGGAGTAGCTCCGTAAACCCAGTAGATGACACATCATAAATCAG--TGCTTCTAAATGTTTGAGGTCCTTTGCACTAAAACCATCCAGTTTGGTCTCTGAGTATTTACGGTGGA---------------GTGTGAGGGT-AAAAG----TTCTTAGTGAGCTTGGAGCAAGTTGGGACTTTAGAATCTCAAAGCAAAACAGAAAAGGATCTACACAATTTATCATATCTATGTTTATTCAATTTTCCTTAGAGAAACATGTTTCCAGCAACTGCATGAGACTATAAATTAAAGTG-----TTTTGAGTCTCTGACTACTGCCTCACTCAACCCAGGAGCTTCTAGGGAGCTGTGAGA-GCTTC-GCAGCATCCTCTATTTT-AGGACCAGGCTTTTCTTCATGCCCTCGCTCCTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1489330 437 - 107702431 GTGATTGAGCTAATAGTCACTCCAGTGAGATGAAAAATATATGGTATACTCTAGGAGTAGCTCCGTCAACCCAGTAGATGACGCATCATAAGTCAG--TGCTTTTAAATGTTTGATGTCCTTTGCACTGAAACCATCCAGTTTGGTCTCTGAGTATTTACGGTGGA---------------GTGTGAGGGT-AAAAG----TTCTTAGTGAGCTTGGAGCAAGTTAGGACTTTAGAATCTCAAAGCAAAACAGAAAATGATCCACACAGTTTATCATATCTATGTTTATTCAATTTTCCTTAGAGAAACGTGTTTCCAGCAACTGCATGAGACTATAAATTAAAGTG-----TTTTGAGTCTCTGACTACTGCCTCACTCAACCCAGTAGCTTCTAGGGAGCTGTGAGA-GCTTC-GCAGCATCCTCTATTTT-AGGACCAGGCTTTTCTTCATGCCCTCGCTCCTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 977999 437 - 2200435 GTGATTGAGCTAACAGTCACTCCAGTGAGATGAAAAATATATGGTATACTCTAGGAGTAGCTCCGTAAACCCAGTAGATGACACATCATAAATCAG--TGCTTTTAAATGTTTGATGTCCTTTGCACTGAAACCATCCGCTTTGGTCTCTGAGTATTTACGGTGGA---------------GTGTGAGGGT-AAAAG----TTATTAGTGAGCTTGGAGCAAGTTAGGACTTTAGAATCTCAAAGCAAAACAGAAAATGATCCACACAATTTATCATATCTATGTTTATTCAATTTTCCTTAGAGAAACATGTTTCCAGCAACTGCATAAGACTATAAATTAAAGTG-----TTTTGAGTCTCTGACTACTGCCTCACTCAACCCAGGAGCTTCTAGGGAGCTGTGAGA-GCTTC-GCAGCATCCTCTATTTT-AGGACCAGGCTTTTCTTCATGCCGTCGCTCCTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1407635 437 - 13651311 GTGATTGAGCTAACAGCCACTCCAGTGAGATGAAAAATATATGATATACTCTAGGAGTAGCTCCGTAAACCCAGTAGATGACACATCATAAATCAG--TGCTTTTAAATGTTTGACGTCCTTTACACTGAAACCATCCAGTTTAGTCTCTGAGTATTTACAGTGGA---------------GTGTGAGGGT-AAAAG----TTCTTAGTGAGTTCGGAGCAAGTTGGGACTTTAGAATCCCAAAGCAAAACAGAAAATGATCCACATAATTTATCATATCTATGTTTATTCAATTTTCCTTAGAGAAACATGTTTCCAGCAACTCCATGAGACTATAAATTAAAGTG-----TTTCGAGTCTCTGACTACTGCCTCACTCAGCCCAGGAGCATCTAGGGAGCTGTGAGA-GCTTC-GCAGCATCCTCTATTTT-AGGACCAGGCTTTTCTTCATGCCCTCGCTCCTT i colAng1.NW_012118821v1 I 4 C 0 s aotNan1.NW_018513311v1 139764 421 + 287728 GTGATTGAGCTGACGGTCACTCCAGTGAGTTGAGAAATATATGGTCCACTCTAGGAATAGCTCCATAAACCCCATAGAGGACACATCACAAATCAG--TGCTTTTAAATGTTTGAT-TCCTTTGCACTAAAAGCATCCAGTTTGGTCTCTGAGTATTTACGGTGGA---------------GTGTGAGGGTGGGAGG----TTCTTACTGACCTCAGAGCAAGTTGGGACTTTTGAATCCTAAAGCAAAACAGAGAATGATCCACACAATTTATCATATCGAGGTTTGCTCAATTTTCCTAAGAGAAACATGCTTCCAGCAACTACACGAGACTGTAAATTAAAGGG-----TTTTGAGTCTCTGACTACTGACACACTCAGCCC----------GAGGAGCTG-GAGC-GCTTC-GCAGCATCCTCTCTCTT-CAGACAGGGC--TTCTTCATGCCCTGGCTC--- i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1748415 446 + 4416731 GGGATTTATCTAATGGTCATTCGTGTGAGTTGAAAAATAAACAATACACCCAAGAAATAGCTCA--AAATTCGTTAGAAAATATATCATAAACCAGTATGTTTTTATGTGTTTGATGTTATT----CTAAGAGCTTCAAGTTTGGTCTGTGAGTTCTTATGGAGGGTGGTAGAAGAGTGCTGGGTCAGGTT-GGAAATTTCTTCTTAATGAGCTTGGAGCAAGTTGGGACTTTTGAATCCCAAAGAATAACAGAAAATGATCCAAGCTATTTCTCCTATCTAGGCTTGCTCACTATTCCTAAGGTAAACCTGTTTCCAGCACTTACATAAGACCATAGATTAAAAAGAAATTATTAAAGTACTTGAGGACAGACTGACACTGCCA----------AGGGAGCTGTGATACACTGCAGCAGAATTCCCTATCTGAAGGAGCAATTAATTTTCTCTGCTTCAACT---- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330257 7 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e calJac3.chr14 1407450 9043 - 108792865 I a score=763296.000000 s hg38.chr2_KI270774v1_alt 145727 100 + 223625 CTGGTCTCGGCTAAGTGGGGGTGCAGGCAGCCCGATGAT-GTTCCACTGGGTGCTGCAAACCCCC-CATCCACTGCAGAAAATATGTAGCTATGAATGTATC s panTro5.chr2A 1432655 100 + 111504155 CTGGTCTCGGCTAAGTGGGGGTGCAGGCAGCCCGATCAT-GTTCCACTGGGCGCTGCAAACCCCC-CATCCACTGCAGAAAATATGTAGCTATGAATGTATC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1381714 100 + 114371477 CTGGTCTCGGCTAAGTGGGGGTGCAGGCAGCCTGATGAT-GTTCCACTGGGCGCTGCAAACCCCC-CATCCACTGCAGAAAATATGTAGCTATGAATGTATC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1405772 100 + 1464242 CTGGTCTCGGCTAAGTGGGGGTGCGGGCAGCCCGATGAT-GTTCCACTGGGCGCTGCAAACCCCC-CATCCACTGCAGAAAATATGTAGCTATGAATGTATC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1128676 100 + 81552678 CTGGTCTCAGCTAAGTGGAGATGCAGCCAGCCCGATGAT-GTTCCACTGGGCGCTGCAAACCCCC-CATCCACTGCAGAAAATATGTAGCTATGAATGTATC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1458039 99 + 108979918 CTGGTCTCAGCTAAGTGGGGATGCAGCCAGCCCGATGAT--TTCCACTGGGTGCTGCAAACCCCC-CATCCACTGCAGAAAACATGTAGCTATGAATGTATC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1430475 99 - 111193037 CTGGTCTCAGCTAAGTGGGGATGCAGCCAGCCCGATGAT--TTCCACTGGGTGCTGCAAACCCCC-CATCCACTGCAGAAAACATGTAGCTATGAATGTATC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1458343 99 + 3644372 CTGGTCTCAGCTAAGTGGGGATGCAGCCAGCCCGATGAT--TTCCACTGGGTGCTGCAAACCCCC-CATCCACTGCAGAAAACATGTAGCTATGAATGTATC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1412883 99 - 10304083 CTGGTCTCAGCTAAGTGGGGATGCAGCCAGCCCGATGAT--TTCCACTGGGTGCTGCAAACCCCC-CATCCACTGCAGAAAACATGTAGCTATGAATGTATC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1489767 100 - 107702431 CTGGTCTCAGCTAAGTGGGGATGCAGCCAGCCCGATGAT-GTTCCACTGGGTGCTGCAAACCCCC-CATCCACTGCAGAAAACATGTAGCTATGAATGTATC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 978436 99 - 2200435 CTGGTCTCAGCTAAGTGGGGATGCAGCAAGCCCGATGAT--TTCCACTGGGTGCTGCAAACCCCC-CATCCACTGCAGAAAACATGTAGCTATGAATGTATC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1408072 100 - 13651311 CTGGTCTCAGCTAAGTGGGGATGCAGCCAGCCCGATGAT-GTTCCACTGGGTGCTACAAACCCCC-CATCCACTGCAGAAAATATGTAGCTATGAATGTATC i colAng1.NW_012118821v1 C 0 C 0 s cebCap1.NW_016107827v1 1330264 100 + 1864846 CTGGTCTCAGCGGAGTGGGGATGTGGCCAGCCAGATGAT-GTTCCCTTGTGTGCTGCAAACCCCC-CATCCACCGCAGGAAATCTGTAGCTATGAACGAGCC i cebCap1.NW_016107827v1 I 7 C 0 s aotNan1.NW_018513311v1 140185 101 + 287728 CTGCTCTCAGCTGAGCGGGGATGTGGCCAGCCAGGTGAT-GTTCCCCTGTGCGCTGCAAACCCCCACATCCACCGCAGAAAATCTGTAGCTATGAACGTGCC i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1748861 92 + 4416731 --------AGGTAGGTAGGAATGCAGGTCGACTGATCAGGGTCCTGCTGAGTAGTGGGGACACA--GGTCAACTACAGAAAATCCATGCCTTGGAATGAATC i dasNov3.JH576208 C 0 I 1025 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e otoGar3.GL873658 945012 831 + 5252280 I e calJac3.chr14 1407450 9043 - 108792865 I a score=1934132.000000 s hg38.chr2_KI270774v1_alt 145827 267 + 223625 GACAACCTCAAAGCtatgcaagcctcctcatgcacaccaatgtgtatctctaggtacatattacaaagtggagttagtgggttatgaattatgttcatgttggaatttt-ttatttccataagttatt-gagaacaggtggtgtttggttacatgagtaagttctttagtggtgatttgtgagatttcggtgcacccatcacccaagcagtatacactgaacacaatttgtagctttttatctctcactcccttcccaccctttccccc s panTro5.chr2A 1432755 267 + 111504155 GAAAACCTCAAAGCtatgcaagcctcctcatgcacaccaatgtgtatctctaggtacgtattaaaaagtggagttagtgggttatgaattatgttcatgttggaatttt-ttatttccataagttatt-gagaacaggtggtgtttggttacatgagtaggttctttggtggtgatttgtgagatttcggtgcacccatcacccaagcagtatacactgaacacaatttgtagccttttatctctcactcccttcccaccctttccccc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1381814 267 + 114371477 GAAAACCTCAAAGCtatgcaagcctcctcatgcacaccaatgtgtatctctaggtacgtattaaaaagtggagttagtgggttatgaattatgttcatgttggaatttt-ttatttccataagttatt-gagaacaggtggtgtttggttacatgagtaagttctttggtggtgatttgtgagatttcggtgcacccatcacccaagcagtatacactgaacacaatttgtagccttttatctctcactcccttcccaccctttccccc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1405872 267 + 1464242 GACAACCTCAAAGCtatgcaagcctcctcatgcacaccaatgtgtatctctaggtacatattacaaagtggagttagtgggttacgaattatgttcatgttggaatttt-ttatttccataagttatt-gagaacaggtggtgtttggttacatgagtaagttctttagtggtgatttgtgagatttcggtgcacccatcacccaagcagtatacactgaacacaatttgtagccttttatctctcactcccttcccaccctttccccc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1128776 268 + 81552678 AAAAACCTCAAAGCTATACAAGCCTCCTCATGCACACCAATGTGTATCTCTAGGTACATAATACAAAGTGGAGTTAGTGGATTATGAATGATGTTCATGTTGGAAtttt-ttatttccgtaggtttctggggaacaggtggtgtttggttacatgagtaagttctttcgtggtgattcgtgagattttggtgcacccatcacccatgcagtatacactgaacacaatttgtagccttttatccctcactcccttcctaccctttccccc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1458138 268 + 108979918 GAAAACCTAAAAGCTACCCAAGCCTTCTCGTGCACACCAATGTGTATCTCTAGGTACATAATACAAAGTGGAGTTAGTGGATGATGAATTATGTTCAGGATGGAAttttgttatttccataagttatt-gggaacaggtcgtgtttggtgacatgagtaagttcttcagtggtgatttgtgagattttggtgcacctgtcacctaagcagtatacactgaacacaatttgtagccttttatccctcagtcccttcccaacatttccccc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1430574 268 - 111193037 GAAAACCTAAAAGCTACCCAAGCCTTCTCGTGCACACCAATGTGTATCTCTAGGTACATAATACAAAGTGGAGTTAGTGGATGATGAATTATGTTCAGGATGGAAttttgttatttccataagttatt-gggaacaggtggtgtttggtgacatgagtaagttcttcagtggtgatttgtgagattttggtgcacctgtcacctaagcagtatacactgaacacaatttgtagccttttatccctcagtcccttcccaacatttccccc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1458442 268 + 3644372 GAAAACCTAAAAGCTACCCAAGCCTTCTCGTGCACACCAATGTGTATCTCTAGGTACATAATACAAAGTGGAGTTAGTGGATGATGAATTATGTTCAGGATGGAAttttgttatttccataagttatt-gggaacaggtggtgtttggtgacatgagtaagttcttcagtggtgatttgtgagattttggtgcacctgtcacctaagcagtatacactgaacacaatttgtagccttttatccctcagtcccttcccaacatttccccc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1412982 268 - 10304083 GAAAACCTAAAAACTACCCAAGCCTTCTCGTGCACACCAGTGTGTATCTCTAGGTACATAATACAAAGTGGAGTTAGTGGATTATGAATTATGTTCAGGATGGaattttgttatttccataagttatt-gggaacacgtggtgtttggtgacatgagtaagttcttcagtggtgatttgtgagattttggtgcacctgtcacctaagcagtatacactgaacacaatttgtagccttttatccctcactcccttcccaacatttccccc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1489867 268 - 107702431 GAAAACCTAAAAGCTACCCAAGCCTTCTCGTGCACACCAGTGTGTCTCTCTAGGTACATAATACAAAGTGGAGTTAGTGGATTATGAATTATGTTCAGGATGGAAttttgttatttccataagttatt-gggaacaggtggtgtttggtgacatgagtaagttcttcagtggtgatttgtgagattttggtgcacctgtcacctaagcagtgtacactgaacacaatttgtagccttttatccctcactcccttcccaacatttccccc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 978535 268 - 2200435 GAAAACCTAAAAGCTACCCAAGCCTTCTCGTGCACACCAATGTGTATCTCTAGGTACATAATACAAAGTGGAGTTAGTGGATTATGAATTATGTTCAGGATGGAAttttgttatttccataagttatt-gggaacaggtggtgtttggtgacatgagtaagttcttcagtggtgatttgtgagattttggtgcacctgtcacctaagcagtatacactgaacacaatttgtagccttttatccctcactcccttcccaacatttccccc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1408172 268 - 13651311 AAAAACCTAAAACCTACCCAAGCCTTCTCATGCACACCAATGTGTATCTCTAGGTACATAATACAAAGTGGAGTTAGTGGATTATGAATTATGTTCAGGTTGGAAttttgttatttccataagttatt-ggcaacaggtggtgtttggtgacatgagtaagttcttcagtggtgatctgtgagattttggtgcacttgtcacctaagcagtatacactgaacacaatttgtagccttttatccctcactcccttcccatcatttccccc i colAng1.NW_012118821v1 C 0 C 0 s cebCap1.NW_016107827v1 1330364 268 + 1864846 AAACACCTGAAAGCTACACAGCCCTCCTCATGCACACCGATATGTATCTCCAGGGACATAACACAAAGTGGAGTTAGTGGATTATGAATTATGTTCATGTTGGAAtttttttattttcataagttactggggaacgagtggtgttcggttacatgagtaagctctttagcggtgatttgtgagattttggtgcacccgtcacccaagcagtgcacactgcacccagcttgcagccttttatccctcac-cccttcacaccctttccccc i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 140286 265 + 287728 AAACACCTGAAAGCTACGCAGGCCTCCTCCTGCACACCCATGTGTATCTCCAGGTACATAACACAAAGTGGAGTTAGTGGATTATGAATTATGTTCATGTTGGAAtttttttatgttcataagttactggggaacaagtggtgttcggttacatgagtaag---tttagtggtgatttgtgagattttggtgcacctgtcactcaagcagggtacactgcacccagcctgcagccttttatccctcac-cccttcacgccctttccccc i aotNan1.NW_018513311v1 C 0 I 61 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1748953 1025 + 4416731 I e calJac3.chr14 1407450 9043 - 108792865 I a score=209917.000000 s hg38.chr2_KI270774v1_alt 146094 32 + 223625 tgagtccccaaagtccactgtgtcattcttac s panTro5.chr2A 1433022 32 + 111504155 tgagtccacaaagtccactgtgtcattcttac i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1382081 32 + 114371477 tgagtccacaaagtccactgtgtcattcttac i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1406139 32 + 1464242 tgagtccacaaagtccactgtgtcattcttat i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1129044 32 + 81552678 tgagtccccaaagtccactgtgtcattcttac i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1458406 32 + 108979918 tgagtccccaaagtccactgtgtcattcttaa i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1430842 32 - 111193037 tgagtccccaaagtccactgtgtcattcttaa i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1458710 32 + 3644372 tgagtccccaaagtccactgtgtcattcttaa i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1413250 32 - 10304083 tgagtccccaaagtccactgtgtcgttcttaa i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1490135 32 - 107702431 tgagtccccaaagtccactgtgtcattcttaa i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 978803 32 - 2200435 tgagtccccaaagtccactgtgtcattcttaa i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1408440 32 - 13651311 tgagtccccaaagtctactgtgtcattcttat i colAng1.NW_012118821v1 C 0 C 0 s cebCap1.NW_016107827v1 1330632 31 + 1864846 cgagtcccc-aagtccactgtgtcattcttac i cebCap1.NW_016107827v1 C 0 I 14 e aotNan1.NW_018513311v1 140551 61 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1748953 1025 + 4416731 I e calJac3.chr14 1407450 9043 - 108792865 I a score=176660.000000 s hg38.chr2_KI270774v1_alt 146126 31 + 223625 gcctttacatccccatagctgaggtgtcact s panTro5.chr2A 1433054 31 + 111504155 gcctttacatccccatagctgaggtctcact i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1382113 31 + 114371477 acctttacatccccatagctgaggtctcact i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1406171 31 + 1464242 gcctttacatccccatagctgaggtctcact i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1129076 31 + 81552678 acctttacatcctcatagctgaggtcccact i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1458438 31 + 108979918 gcctttacatcctcatagctgaggtcccact i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1430874 31 - 111193037 gcctttacatcctcatagctgaggtcccact i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1458742 31 + 3644372 gcctttacatcctcatagctgaggtcccact i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1413282 31 - 10304083 gcctttacatcctcatagctgaggtcccact i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1490167 30 - 107702431 gcctttacatcctcata-ctgaggtcccact i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 978835 31 - 2200435 gcctttacatcctcatagctgaggtcccact i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1408472 31 - 13651311 gcctttacatcctcatagctgaggtcccact i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 140551 61 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1330663 14 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1748953 1025 + 4416731 I e calJac3.chr14 1407450 9043 - 108792865 I a score=1039973.000000 s hg38.chr2_KI270774v1_alt 146157 140 + 223625 tatgagtgagaacataaaatgtttggttttcaattcttgagttacttcacttagaataatagtctccaatctcaaccaggtctctgcaaatgccattaattcactcctttttatggctgagtagtattccatcgtatat-a s panTro5.chr2A 1433085 140 + 111504155 tatgagtgagaacataaaatgtttggttttcaattcctgagttacttcacttagaataatagtctctgatctcaaccaggtcgctgcaaatgccattaattcactcctttttatggctgagtagtattccatcgtatat-a i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1382144 140 + 114371477 tatgagtgagaacataaaatgtttggttttcaattcctgagttacttcacttagaataatagtctctgatctcaaccaggtcgctgcaaatgccattaattcactcctttttatggctgagtagtattccatcgtatat-a i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1406202 141 + 1464242 tatgagtgagaacataaaatatttggttttcaattcctgagttacttcacttagaataatagtctccaatctcaaccaggtcgctgcaaatgccattaattcactcctttttatggctgagtagtattccatcgtatataa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1129107 140 + 81552678 tatgagtgagaacataaaatgtttggttttcaattcctgagttacttcacttagaataatagtctccaatctcaaccaggtcgctgcaaatgccattatttcactcctttttatggctgagtagtattccatcgtatat-a i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1458469 140 + 108979918 tatgagtgagaacataaaatgtttggttttcaattcctgagttacttcacttagaataatagtctccaatctcaaccaggtagctgcaaatgccattaattcattcctttttatggcggagtagtattccatcatatat-a i rheMac8.chr13 C 0 I 1 s macFas5.chr13 1430905 140 - 111193037 tatgagtgagaacataaaatgtttggttttcaattcctgagttacttcacttagaataatagtctccaatctcaaccaggtagctgcaaatgccattaattcattcctttttatggcggagtagtattccatcatatat-a i macFas5.chr13 C 0 I 1 s macNem1.NW_012011978v1 1458773 139 + 3644372 tatgagtgagaacataaaatgtttggttttcaattcctgagttacttcacttagaataatagtctccaatctcaaccaggtagctgcaaatgccattaattcattcctttttatggcggagtagtattccatcat-tat-a i macNem1.NW_012011978v1 C 0 I 1 s cerAty1.NW_012000820v1 1413313 140 - 10304083 tatgagtgagatcataaaatgtttggttttcaattcctgagttacttcacttagaataatagtctccaatctcaaccaggtagctgcaaatgccattaattcattcctttttatggcggagtagtattccatcatatat-a i cerAty1.NW_012000820v1 C 0 I 1 s chlSab2.chr14 1490197 140 - 107702431 tatgagtgagaacataaaatgtttggttttcaattcctgagttacttcacttagaataatagtctccaatctcaaccaggtagctgcaaatgccattaattctttcctttttatggcggagtagtattccatcatatat-a i chlSab2.chr14 C 0 I 202 s manLeu1.NW_012103754v1 978866 140 - 2200435 tatgagtgagaacataaaatgtttggttttcaattcctgagttacttcacttagaataatagtctccaatctcaaccaggtagctgcaaatgccattaattcattcctttttatggcggagtagtattccatcatatat-a i manLeu1.NW_012103754v1 C 0 I 1 s colAng1.NW_012118821v1 1408503 140 - 13651311 tatgagtgagaacataaaatgtttggttttcaattcttgagttacttcacttggaataatggtctccaatatcaaccaggtcgctgcaaatgccattaattcattcctttttatggcggagtagtattccatcatatat-a i colAng1.NW_012118821v1 C 0 I 1 s cebCap1.NW_016107827v1 1330677 137 + 1864846 tatgagtgagaacatacaatgttctgttttccattcctgagttccttcacttacaataatagtttccagtctcatccaggtcactgcaaatgccactaattcattcctttttatggctg---agtattccatcgtatat-a i cebCap1.NW_016107827v1 I 14 I 1 s aotNan1.NW_018513311v1 140612 134 + 287728 gatgagcgagaacacgcgatgtttcggtttccattcctgagttccttcactt---agaatagtttccagtctcatccaggtcactgcaaatgccactaattcattccttttcatggctg---agtattccatcatatat-a i aotNan1.NW_018513311v1 I 61 I 1 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1748953 1025 + 4416731 I e calJac3.chr14 1407450 9043 - 108792865 I a score=-9691.000000 s hg38.chr2_KI270774v1_alt 146297 5 + 223625 -aaaaa s panTro5.chr2A 1433225 5 + 111504155 -aaaaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1382284 5 + 114371477 -aaaaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1406343 5 + 1464242 -aaaaa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1129247 5 + 81552678 -taaaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1458610 4 + 108979918 --ataa i rheMac8.chr13 I 1 I 53 s macFas5.chr13 1431046 4 - 111193037 --ataa i macFas5.chr13 I 1 I 53 s macNem1.NW_012011978v1 1458913 4 + 3644372 --ataa i macNem1.NW_012011978v1 I 1 I 61 s cerAty1.NW_012000820v1 1413454 4 - 10304083 --gtaa i cerAty1.NW_012000820v1 I 1 I 39 s manLeu1.NW_012103754v1 979007 4 - 2200435 --ataa i manLeu1.NW_012103754v1 I 1 I 57 s colAng1.NW_012118821v1 1408644 4 - 13651311 --ataa i colAng1.NW_012118821v1 I 1 I 31 s cebCap1.NW_016107827v1 1330815 5 + 1864846 atgta- i cebCap1.NW_016107827v1 I 1 C 0 s aotNan1.NW_018513311v1 140747 5 + 287728 ataca- i aotNan1.NW_018513311v1 I 1 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1748953 1025 + 4416731 I e calJac3.chr14 1407450 9043 - 108792865 I e chlSab2.chr14 1490337 202 - 107702431 I a score=1380438.000000 s hg38.chr2_KI270774v1_alt 146302 191 + 223625 tcacagtttctttatccactcattgattgatgggcatttgggttgcttccacagtttggcaattgtgaattgtgcggctataaacacggatgtgccaatgcatttttcgtataatgacttcttttcctctgggtagatacccaggaatgggatcgctggatcaaatagtagttctacttttagttctttaa s panTro5.chr2A 1433230 191 + 111504155 tcacagtttctttatccactcattgattgatgggcatttgggttgcttccacagtttggcaattgtgaattgtgcggctgtaaacacggatgtgccaatgcatttttcgtataatgacttcttttcctctgggtagatacccaggaatgggatcgctggatcaaatagtagttctacttttagttctttaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1382289 191 + 114371477 tcacagtttctttatccactcattgattgatgggcatttgggttgcttccacagtttggcaattgtgaattgtgcggctataaacacagatgtgccaatgcatttttcgtataatgacttcttttcctctgggtagatacccaggaatgggatcgctggatcaaatagtagttctacttttagttctttaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1406348 191 + 1464242 tcacagtttctttatccactcattgattgatgggcatttgggttgcttccacagtttggcaattgtgaattgtgtggctataaacacgcgtgtgccaatacatttttcgtataatgacttcttttcctctgggtagatacccaggaatgggatcgctggatcaaacagtagttctacttctagttctttaa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1129252 191 + 81552678 tcacagtttctttatccacttgttgattgatgggcatttgcgttgcttccacagtttggcaattgtggattctgcggctataaacacgcgtgtgcccatacatttttcgtataatgacttcttttcctctgggtagatacccaggaatgggattgctggatcaaatagtagttctacttttagttctttaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1458667 190 + 108979918 tcacagtttctttatccacgcattgattgatgggcatttgtgctgcttccacagtttggcaattgtgaattgtgcagctataaacgtgtgtgtgccagtatttttttcgtat-atgacttcttttcctctgggtagatacccagtaatgggatcgctggatcaagcagtagttccacttttagccctttaa i rheMac8.chr13 I 53 C 0 s macFas5.chr13 1431103 190 - 111193037 tcacagtttctttatccacgcattgattgatgggcatttgtgctgcttccacagtttggcaattgtgaattgtgcagctataaacgtgtgtgtgccagtatttttttcgtat-atgacttcttttcctctgggtagatacccagtaatgggatcgctggatcaagcagtagttccacttttagccctttaa i macFas5.chr13 I 53 C 0 s macNem1.NW_012011978v1 1458978 190 + 3644372 tcacagtttctttatccacgcattgattgatgggcatttgtgctgcttccacagtttggcaattgtgaattgtgcagctataaacgtgtgtgtgccagtatttttttcgtat-atgacttcttttcctctgggtagatacccagtaatgggatcgctggatcaagcagtagttccacttttagccctttaa i macNem1.NW_012011978v1 I 61 C 0 s cerAty1.NW_012000820v1 1413497 190 - 10304083 tcacagtttctttatccacgcattgattgatgggcatttgtgctgcttccacagtttggcaattgtgaattgtgcagctataaacgtgtgtgtgccagtatttttttcgtat-atgacctcttttcctctgggtagatacccagtaatgggatcgctggatcaagcagtagttccacttttagccctttga i cerAty1.NW_012000820v1 I 39 C 0 s chlSab2.chr14 1490539 190 - 107702431 tcacagtttctttatccacgcgttgattgatgggcatttgtgctgcttccacagtttggaaattgtgaattgtgcagctataaacgtgtgtgtgccagtatttttttcgtat-atgacttcttttcctctgggtagatacccagtaatgggatcgctggatcaagcagtagttccacttttagccctttaa i chlSab2.chr14 I 202 C 0 s manLeu1.NW_012103754v1 979068 190 - 2200435 tcacagtttctttatccacgcgttaattgatgggcatttgtgctgcttccacagtttggcaattgtgaattgtgcagctataaacgtgtgtgtgccagtattttttccgtat-atgacttcttttcctctgggtagatacctagtaatgggatcgctggatcaagcagtagttccacttttagccctttaa i manLeu1.NW_012103754v1 I 57 C 0 s colAng1.NW_012118821v1 1408679 190 - 13651311 tcacagtttctttatccactcgttgattgatgggcatttgtgctgcttccacagtttggcaattgtgaattgtgcagctataaacgtgcgtgtgccagtatttttttcgtat-atgacttcttttcctctgggtagatacccagtaatgggatcgctggatcaaacagtagttctacttttagccctttaa i colAng1.NW_012118821v1 I 31 C 0 s cebCap1.NW_016107827v1 1330820 188 + 1864846 --ccagtttctttatccatttgttgattgatgggcgtttgggttggttccacagtttggcaattgtgaattatgctgttataaacatgtgtgtgcaagcatctttttcata-gatgacttattttcctctgggtagatacccagtagtgggattgctggatcaaatggtagttctactttcagttctttaa i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 140752 191 + 287728 ccccagtttctttatccatctgttgattgaagggcgtttgggttggttccacagtttggcaattgtgaattgtgctgttatacgcatgcgtgtgcaagtatctttttcatatgatgacttcttttcctctgggtagacacccagtactgggattgctggatcacatggtagttctacttttagttctttaa i aotNan1.NW_018513311v1 C 0 I 17295 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1748953 1025 + 4416731 I e calJac3.chr14 1407450 9043 - 108792865 I a score=74139.000000 s hg38.chr2_KI270774v1_alt 146493 11 + 223625 ggaatctccac s panTro5.chr2A 1433421 11 + 111504155 ggaatctccac i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1382480 11 + 114371477 ggaatctccac i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1406539 11 + 1464242 ggaatctccac i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1129443 11 + 81552678 ggaatctccac i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1458857 11 + 108979918 ggaatctccat i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1431293 11 - 111193037 ggaatctccat i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1459168 11 + 3644372 ggaatctccat i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1413687 11 - 10304083 ggaatctccat i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1490729 11 - 107702431 ggactctccat i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 979258 11 - 2200435 ggaatctccat i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1408869 11 - 13651311 ggaatctccat i colAng1.NW_012118821v1 C 0 C 0 s cebCap1.NW_016107827v1 1331008 11 + 1864846 ggaatctccac i cebCap1.NW_016107827v1 C 0 I 8767 e aotNan1.NW_018513311v1 140943 17295 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1748953 1025 + 4416731 I e calJac3.chr14 1407450 9043 - 108792865 I a score=24565816.000000 s hg38.chr2_KI270774v1_alt 146504 4414 + 223625 ggtgtttttccacagtggttgtactaatttacattcctaccagca-gggtagaagtgttgttcccttttcaccatatccacaccaacatctattattcgttga-tttttttt-attatggccattcttgccagagtaaggtgctaatgtgttgtgttttgatttgcatttccctgatcattagtga---tgagcattttttcatatgtttgttggccatgtgtgtatcttcttttgagaattctctattcatgtccttagcccactttttgatgggattgtttggtttttcttactgatttgtttgagtttgttgtagattctggatattaatcctttgtcagatgtgtggattgtgaagattttctcccactctgtgagttgtctgtttactctactgactgttccttttgctgtgcaaaagctctttagtttaattaagtcccaactatttatctttctttttattgaatttgcttttgtgttcttggtcattaaatccttgcctgagccaatagcaagaagaatttttccaatgttatcttctagagtttttatggtttcaggtcttagacttaagtccttgatccatcttgagttgtttttgtataaggtgagagatgaggatctagtttcattct-cctacacatggcttgccaattatcgcagcatcatttgttgaatagggtgtcctttgcccactttatgtttttgtttgcattgtcgaagatcaattggctgtaagtatttgggtttatttctgggttctctattctattccattggtctatgtgcttatttttgtaccagtactatgctgttttggtgactatggccttatagtatagtttgaaatcaggtaatgtgatgcctccagatttgttctttctgcttagtcttgctttggctatgcaggctcttttttggttccatacgaattttagga-ttttgttttctaatttgatgaagaatgatggtggta-ttttgatgggaattgtgttgaatttgtagattgctttcagcagtatggttgttttcacaatattgactctacccatccatgtgcatgggttgtgtcccatttgtttgtgttgtctgtggtttttttcagcag-----tgttttgtagttttccttgtagaggtctttcatctccttggttaggtatatttctaagtattt-----------------------------------------------------tattttttt--------------------------cagctattgtagaaggggttgagttcttgatttgattctcagcttggttgctgttggcgtatagaagagctactg----------------------att------tctgtacattaattttgtatccagaaatttttctgaattatttgatcagttctaggagctttctggaggagtctttagggttttctaggtaaacaatcatatcattagcaaacagcaacagtttgacttcctcttcgccgatttggatgccctttatttcttttgtctgattcctctggctaggatttcgagtactatgttgaagaggagtggtgagagtaggcatccttgtcttgttcccattctcagagggaatgctttcaacttttccccattcagaattatgttggctgtgggtttgtcatagatggcttttaatacattgagctatttcccttgtatgccaattttgctgagttttgatcataaaaggatgctggatctttttgaatgctttttatgcatctatcgagacgatcatgtgatttctgcttttgattctgcttacatggtgtatcacatttattgacttgtgtatgttaagccatccctgcatccctggtatgaaacccacctgatcatggtggattatctttttgatatgcattggatttggttagctagtattttgttaaggattttagcatctatgttcatcagggttattggtccgtagttttcttttttggttatgtcctcttctggttttactattagggtgatactggccttacagaatgatttaggaagggttgcctgtttctctatcttgtggagtagtgtcaataggattggtaacaattcttctttgaatgtctggcagaattcttctgtgaatctgtctggttcttgactttttttgttggtaatttttatattaccatttcaatcttactgcttgttattgttcagggtgtctaattcttcctgacttaagctaggagggttatatctttccaggaatttatccatc---tctaggtttcccagttgatgtgcataaagctgttcatagtagccatgaatgatcttttgtatttcagtggtgtcagttgtaatatctcccattttgcttctaattgagcttatttggattt--tctcttcttttcttggttaaccttgctaatggtctatcaattttatttatcttttcaaagaaccaggtttttgtttcatttatcttttgtattt---------------tttttgttgttgttt---caatttcatttagttctgctctgatcttggttatttcctttcttctgctgggtttgggtttggtttgttcttgtttctctaattccttaaggtgtaaccttagattgtcagtttgtgctctttcagattttttatgtaggcatttagggctatg---aactttcctcttagcaccgcctttgctgtatcctagaggtttcgataggttgtgtcattattgtcattcagttcaaagaa-----------ttttttttttttt------gagatggagtttcgctcttgttgcccag--------------------------------------------------------------------------------------gctggagtgtagtggcacaatctcggctgattgcaacctctgcctcctgggttcaagtgattctcctccctcaggatcccgagtagctgggattataggcat----------ccaccaccatgcccagctaatcttttgtatttttagtagagattgggtttcaccatgttggccagactggtcttgaattcctggtctcaggtgatccaccagc-tcagcctcccaaagcgctgggattacaggcatgagccactgtgcctggccccgaagaattttttaatttccatcttgatttcatttttaacccagt-gtcattcaggagcagattatttaatttccatgtatttgcatgattttgaaggttccttttggagttgatttccagttttatttcactgtggtctgagagagtgcttgatataatttcaattttcttaaatttattgaggcttattttgagacctatcatatggtctatctcagagaaagctccatgtgctgttgaatagaatgtgtattctgcagttgttgggtagaatgttctgtaaatacctgttaagtccatttgttccagggtatagtttaaatccacagtttctttgttgactttctgtcttgatgacctgtctagtgctgtcagtggagtgttgcagtcccccactattactgtgttgctgtctatctcatttctcagttctgttagtaattgttttataaatttgggaactccagtgttaggtgcacatttatttaggattgtgatattttcctgttggacaaggccttttatcattatataatgaccctctttgtcttttttaaccactgttgctttaaagtttattttgtctgatataagaatagctac-actgctcgcttttggtgtccatttgcatggaatgccttcttctacccctttaccttaagtttatgtgagtccttatgtgttaggcatgtctcttgaaggcagcagatggttggtgaattcttatgcattctgcaattctgtatcttttaggtggagcatttagaccatttacattcaatgttagtactgagatgtgaggtatcattccattcattgtgctatttgttgcctgtaccccttgggtttttgtgattttgctg--gtttttt-taattgtatttttgttgtataggtcctgtgagatttatgctttaaagaggttgtgttttgatgtgtttccaggatttgtttcaagatttagagctccttttagcagttcttgtagtgctgccttggtaggggtgaattttctcatcatttgtttgtctgggaaagattgttatctttccttcatttatgaagcttagctttgctggataccacatttttggtggataattgttttgtctgaggaggctgaagat-gggtcccaatcccttctagcttgtagggtttctgctgagaaatctgctgttaatctgataggtttttactttataggttacctggtgtttttgtttcacagctcttaagattcttttcatcatcttaactttaggtaacctgatgacaatgtgcctg------ggcaatgatcttttagcaatgaattctccaggtgttctttgagcctcttgtatttggtgtctaggtctccagcaaggccagggaggttttcctcgattattccccaaaataaactttccaaacttttagatttctcttcttcctcaggaatgctaattattcctaggtttggtcattagacataatcccagacatcttggag s panTro5.chr2A 1433432 4430 + 111504155 ggtgtttttccacagtggttgtactaatttacattcccaccagca-gggtagaagtgttgttcccttttcaccatatccacaccgacatctattatttgttga-tttttttttattatggccattcttgccagagtaaggtgctatcgtgttgtgttttgatttgcatttccctgatcattagtga---tgagcattttttcatatgtttgttggccatgtgtgtatcttcttttgagaattctctattcatgtccttagcccactttttgatgggattgtttggtttttcttactgatttgtttgagtttgttgtagattctggatattaatcctttgtcagatgtgtggattgtgaagattttctcccactctgtgagttgtctgtttactctactgactgttccttttgctgtgcaaaagctctttagtttaattaagtcctaactatttatctttgtttttattgaatttgcttttgtgttcttggtcattaaatccttgcctgagccaatagcaagaagaatttttccaatgttatcttctagagtttttatggtttcaggtcttagacttaagtccttgatccatcttgagttgtttttgtataaggtgagagatgaggatctagtttcattct-cctacacatggcttgccaattatcgcagcatcatttgttgaatagggtgtcctttgcccactttatgttcttgtttgcattgtcgaagatcaattggctgtaagtatttgggtttatttctgggttctctattctattccattggtctacgtgcttatttttgtaccagtactatgctgttttggtgactatggccttatagtatagtttgaaatcaggtaatgtgatgcctccagatttgttctttctgcttagtcttgctttggctatgcaggctcttttttggttccatacaaattttagga-ttttgttttctaatttgatgaagaatgctggtggta-ttttgatgggaattgtgttgaatttgtagattgctttcagcagtatggttgttttcacaatattgactctacccatccatgtgcatgggttgtgtcccatttgtttgtgttgtctgtggtttttttcagcag-----tgttttgtagttttccttgtagaggtctttcatctccttggtaaggtatatttctaagtattt-----------------------------------------------------tattttttt--------------------------cagctattgtagaaggggttgagttcttgatttgattctcagcttggttgctgttggtgtatagaagagctactgtgtacattaatttacacagtaaattatgtactgtgtacattaattttgtatccagaaatttttctgaattctttgatcagttctaggagctttctggaggagtctttagggttttctaggtaaacaatcatatcattagcaaacagcaacagtttgacttcctcttcgccgatttggatgccctttatttcttttgtctgattgctctggctaggatttcgagtactgtgttgaagaggagtggtgagagtaggcatccttgtcttgttcctgttctcagagggaatgctttcaacttttccccattcagaattatgttggctgtgggtttgtcatagatggcttttaatacattgagctatttcccttgtatgccaattttgctgagttttaatcataaagggatgctggatctttttgaatgctttttatgcatctatcaagacgatcatgtgatttctgcttttgattctgtttacatggtgtatcacatttattgacttgtgtatgttaagccatccctgcatccctg----------------atcatggtggattatctttttgatatgcattggatttggttagctagtattttgttaaggattttagcatctatgttcatcagggatattggtccgtagttttcttttttggttatgtcctcttctggttttactattagggtgatactggcctcacagaatgatttaggaagggttgcctgtttctctatcttgtggagtagtgtcaataggattggtaacaattcttctttgaatgtctggcagaattcttctgtgaatctgtctggtccttgactttttttgttggtaatttttgtattaccatttcaatcttactgcttgttattgttcagggtgtctaattcttcctgacttaagctaggagggttatatctttccaggaatttatccatc---tctaggtttcccagttgatgtgcataaagctgttcatagtagccatgaatgatcttttgtatttcagtggtgtcagttgtaatatctcccattttgcttctaattgagcttatttggattt--tctcttcttttcttggttaaccttgctaatggtctatcaattttatttatcttttcaaagaaccaggcttttgtttcatttatcttttgtattt---------------ttgtggttgttgttg---taatttcatttagttctgctctgatcttggttatttcctttcttctgctgggtttgggtttggtttgttcttgtttctctaattccttaaggtgtaaccttagattgtcagtttgtgctttttcagatttttgatgtaggcatttagggctatg---aactttcctcttagcactgcctttactgtatcctagaggtttcgataggttgtgtcattattgtcgttcagttcaaagaa-----------ttttttttttttt----ttgagatggagtttcgctcttgttgcccag--------------------------------------------------------------------------------------gctggagtgcagtggcacaatctcggctgattgcaacctccgcctcccgggttcaagtgattctcctccctcaggatcccgagtagctgggattataggcat----------ccaccaccatgcccagctaatcttttgtatttttagtagagattgggtttcaccatgttggccagactggtcttgaactcctggtctcaggtgatccaccagcctcagcctcccaaagcgctgggattacaggcatgagccactgtgcctggccccaaagaatttttaaatttccatcttgatttcatttttgacccagt-gtcattcaggagcagattatttaatttccatgtatttgcatgattttgaaggttccttttggagttgatttccagttttatttcactgtggtctgagagagtgcttgatataatttcaattttctttaatttattaaggcttattttgagacctatcatatggtctatctcggagaaagctccatgtgctgttgaatagaatgtgtattctgctgttgttgggtagaatgttctgtaaatacctgttaagtccatttgttccagggtatagtttaaatccacagtttctttgttgactttcggtcttgatgacctgtctagtgctgtcagtggagtgttgtagtcccccactattactgtgttgctgtctatctcatttctcagttctgttagtaattgttttataaatttgggaactccagtgttaggtgcatatttatttacgattgtgatattttcctgttggacaaggccttttatcattatataatgaccctctttgtcttttttaaccactgttgctttaaagtttattttgtctgatataagaatagctac-actgctcgcttttggtgtccatttgcatggaatgcctttttctacccctttaccttaagtttatgtgagtccttatgtgttagacgtgtctcttgaaggcagcagatggttggtgaattcttatccattctgcaattctgtatcttttaagtggagcatttagaccatttacattcaatgttagtactgagatgtgaggtatcattccattcattgtgctatttgttgcctgtacaccttgggtttttgtgattttgctg--gtttttt-tcactgtatttttgttgtataggtcctgtgagatttatgctttaaagaggttgtgttttgatgtgtttccaggatttgtttcaagatttagagctccttttagcagttcttgtagtgctgccttggtaggggtgaattttctcatcatttgtttgtctgagaaagattgttatctttccttcatttatgaagcttagctttgctggataccacatttttggtggataattgttttgtctgaggaggctgaagat-gggtcccaatcccttctagcttgtagggtttctgctgagaaatctgctgttaatctgataggtttttactttataggttacctggtgtttttgtttcacagctcttaagattcttttcttcatcttaactttaggtaacctgacgacaatgtgcctg------ggcaatgatcttttagcaatgaattctccaggtgttctttgagcctcttgtatttggtgtctaggtctccagcaaggccagggaggttttcctcgattattccccaaaataaactttccaaacttttagatttctcttcttcctcaagaatgctaattattcctaggtttggtcattagacataatcccagacatcttggag i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1382491 4427 + 114371477 ggtgtttttccacagtggttgtactaatttacattcccaccagca-gggtagaagtgttgttcccttttcaccatatccacaccgacatctattatttgttga-tttttttttattatggccattcttgccagagtaaggtgctatcgtgttgtgttttgatttgcatttccctgatcattagtga---tgagcattttttcatatgtttgttggccatgtgtgtatcttcttttgagaattctctattcatgtccttagcccactttttgatgggattgtttggtttttcttactgatttgtttgagtttgttgtagattctggatattaatcctttgtcagatgtgtggattgtgaagattttctcccactctgtgagttgtctgtttactctactgactgttccttttgctgtgcaaaagctctttagtttaattaagtcccaactatttatctttgtttttattgaatttgctgttgtgttcttggtcattaaatccttgcctgagccaatagcaagaagaatttttccaatattatcttctagagtttttatggtttcaggtcttagacttaagtccttgatccatcttgagttgtttttgtataaggtgagagatgaggatctagtttcattct-cctacacatggcttgccaattatcgcagcatcatttgttgaatagggtgtcctttgcccactttatgtttttgtttgcattgtcgaagatcaattggctgtaagtatttgggtttatttctgggttctctattctattccattggtctatgtgcttatttttgtaccagtactacgctgttttggtgactatggccttatagtatagtttgaaatcaggtaatgtgatgcctccagatttgttctttctgcttagtcttgctttggctatgcaggctcttttttggttccatacgaattttagga-ttttgttttctaatttgatgaagaatgctggtggta-ttttgatgggaattgtgttgaatttgtagattgctttcagcagtatggttgttttcacaatattgactctacccatccatgtgcatgggttgtgtcccatttgtttgtgttgtctgtggtttttttcagcag-----tgttttgtagttttccttgtagaggtctttcatctccttggtaaggtatatttctaagtattt-----------------------------------------------------ta-tttttt--------------------------cagctattgtagaaggggttgagttcttgatttgattctcagcttggttgctgttggtgtatagaagagctactgtgtacattaatttacacagtaaattatgtactgtgtacattaattttgtatccagaaatttttctgaattctttgatcagttctaggagctttctggaggagtctttagggttttctaggtaaacaatcatatcattagcaaacagcaacagtttgacttcctcttcgccgatttggatgccctttatttcttttgtctgattgctctggctaggatttcgagtactgtgttgaagaggagtggtgagagtaggcatccttgtcttgttcctgttctcagagggaatgctttcaacttttccccattcagaattatgttggctgtgggtttgtcatagatggcttttaatacattgagctatttcccttgtatgccaattttgctgagttttaatcataaagggatgctggatctttttgaatgctttttatgcatctatcaagacgatcatgtgatttctgcttttgattctgtttacatggtgtatcacatttattgacttgtgtatgttaagccatccctgcatccctg----------------atcatggtggattatctttttgatatgcattggatttggttagctagtattttgttaaggattttagcatctatgttcatcagggatattggtccgtagttttcttttttggttatgtcctcttctggttttactattagggtgatactggcctcacagaatgatttaggaagggttgcctgtttctctatcttgtggagtagtgtcaataggattggtaacaattcttctttgaatgtctggcagaattcttctgtgaatctgtctggtccttgac-ttttttgttggtaatttttgtattaccatttcaatcttactgcttgttattgttcagggtgtctaattcttcctgacttaagctaggagggttatatctttccaggaatttatccatc---tctaggtttcccagttgatgtgcataaagctgttcatagtagccatgaatgatcttttgtatttcagtggtgtcagttgtaatatctcccattttgcttctaattgagcttatttggattt--tctcttcttttcttggttaaccttgctaatggtctatcaattttatttatcttttcaaagaaccaggcttttgtttcatttatcttttgtattt---------------ttgtggtggttgttg---taatttcatttagttctgctctgatcttggttatttcctttcttctgctgggtttgggtttggtttgttcttgtttctctaattccttaaggtgtaaccttagattgtcagtttgtgctttttcagatttttgatgtaggcatttagggctatg---aactttcctcttagcactgcctttgctgtatcctagaggtttcgataggttgtgtcattattgtcgttcagttcaaagaa-----------ttttttttttttt-----tgagatggagtttcgctcttgttgcccag--------------------------------------------------------------------------------------gctggagtgcagtggcacaatctcggctgattgcaacctccgcctcccgggttcaagtgattctcctccctcaggatcccgagtagctgggattataggcat----------ccaccaccatgcccagctaatcttttgtatttttagtagagattgggtttcaccatgttggccagactggtcttgaactcctggtctcaggtgatccaccagccttagcctcccaaagcgctgggattacaggcatgagccactgtgcctggccccaaagaatttttaaatttccatcttgatttcatttttgacccagt-gtcattcaggagcagattatttaatttccatgtatttgcatgattttgaaggttccttttggagttgatttccagttttatttcactgtggtctgagagagtgcttgatataatttcaattttctttaatttattaaggcttattttgagacctatcatatggtctatctcggagaaagctccatgtgctgttgaatagaatgtgtattctgctgttgttgggtagaatgttctgtaaatacctgttaagtccatttgttccagggtatagtttaaatccacagtttctttgttgactttcggtcttgatgacctgtctagtgctgtcagtggagtgttgtagtcccccactattactgtgttgctgtctatctcatttctcagttctgttagtaattgttttataaatttgggaactccagtgttaggtgcatatttatttacgattgtgatattttcctgttggacaaggccttttatcattatataatgaccctctttgtcttttttaaccactgttgctttaaagtttattttgtctgatataagaatagctac-actgctcgcttttggtgtccatttgcatggaatgcctttttctacccctttaccttaagtttatgtgagtccttatgtgttagacgtgtctcttgaaggcagcagatggttggtgaattcttatccattctgcaattctgtatcttttaagtggagcatttagaccatttacattcaatgttagtactgagatgtgaggtatcattccattcattgtgctatttgttgcctgtacaccttgggtttttgtgattttgctg--gtttttt-tcactgtatttttgttgtataggtcctgtgagatttatgctttaaagaggttgtgttttgatgtgtttccaggatttgtttcaagatttagagctccttttagcagttcttgtagtgctgccttggtaggggtgaattttctcatcatttgtttgtctgagaaagattgttatctttccttcatttatgaagcttagctttgctggataccacatttttggtggataattgttttgtctgaggaggctgaagat-gggtcccaatcccttctagcttgtagggtttctgctgagaaatctgctgttaatctgataggtttttactttataggttacctggtgtttttgtttcacagctcttaagattcttttcttcatcttaactttaggtaacctgacgacaatgtgcctg------ggcaatgatcttttagcaatgaattctccaggtgttctttgagcctcttgtatttggtgtctaggtctccagcaaggccagggaggttttcctcgattattccccaaaataaactttccaaacttttagatttctcttcttcctcaggaatgctaattattcctaggtttggtcattagacataatcccagacatcttggag i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1406550 4411 + 1464242 ggtgtttttccgtagtggttgtactaatttacattcccaccagca-gggtagaagtgttgttcccttttcaccatatccacaccaacatctattatttgttga-tttttta--attatggccattgttgcctgagtaaggtgctattgtgttgtgttttgatttgcatttccctgatcattagtgatgttgagcattttttc--atgtttgttggccatgtgtgtatcttcttttgagaattctctattcatgtccttagcccactttttgat-ggattgtttggtttttcttactgatttgtttgagtttgttgtaggttctggatattaatcctttgtcagatgtgtggattgtgaagattttctcccactctgtgagttgtctgtttactgtgctgactgttccttttgctgtgcaaaagctctttagtttaattaagtcccaactatttatctttgtgtttattgaatttgcttttgtgttcttggtcattaaatccttgcctgagccaatatcaagaagaatttttccaatgttatcttctagagtttttatagtttcaggtcttagacttaagtccttgatccatcttgagttgtttttgtataaggtgagagatgaggatctagtttcattct-cctacacatggcttgccaattatcgcagcatcatttgttgaatagggtgtcctttgcccactttatgtttttgtttgcattgtcgaagatcaattggctgtaagtatttgggtttatttctgggttctctattctattccattggtctatgtgctta-ttttgtaccagtactatgctgttttggtgactatggccttatagtatagtttgaaatcaggtaatgtgatgcctccagatttgttctttctgcttagtcttgctttggctatgcaggctcttttttggttccatacaaattttagga-ttttgttttctaatttgatgaagaatgatggtggta-ttttgatgggaattgtgttgaatttgtagattgctttcagcagtatggttgttttcacaatattgactctagccatccatgtgcatgggttgtgtcccatttgtttttgttgtctgtggtttttttcagcag-----agttttgtagttttccttgtagagatctttcatctccttggttaggtatatttctaagtattt-----------------------------------------------------tattttttt--------------------------cagctattgtagaaggggttgagttcttgatttgattctcagcttggttgctgttggtgtatagaagagctactg----------------------att------tgtgtacattaattttgtatccagaaatttttctgaattctttgatcagttctaggagctttctggaggagtctttagggtttgctaggtaaacaatcatatcattagcaaacagcaacagtttgacttcctctttgccgatttggatgccctttatttcttttgtctgattgctctggctaggatttcgagtactatgttgaagaggagtggtgagagtaggcatccttgtcttgttcccgttctcagagggaatgctttcatcttttccccattcagaattatgttggctgtgggtttgtcatagatggc-tttaatacattgagctatttcccttgtatgccaattttgctgagttttaatcataaagggatgctggatctttttgaatgctttttatgcatctatcgagacgatcatgtgatttctgcttttgattctgtttacatggtgtatcacatttattgacttgtgtatgataagccatccctgcatccctggtatgaaacccacctgatcatggtggattatctttttgatatgcattggatttggttagctagtattttgttaaggattttagcatctatgttcatcagggatattggtccgtagttttcttttttggttatgtcctcttctggttttactattagggtgatactggcctcacagaatgatttaggaaggattgcctgtttctctatcttgtggagtagtgtcaataggattggtaacaattcttctttgaatgtctggcagaattcttctgtgaatctgtctggtccttgac-ttttttgttggtaatttttgtattaccatttcaatcttactgcttgtttttgttcagggtgtctaattcttcctgacttaagctaggagggttatatctttccaggaatttatccaac---tctaggtttcccagttggtgtgcataaagctgttcatagtagccatgaatgaccttttgtatttcagtggtgtcagttgttatatctcccattttgcttctaattgagcttatttggattt--tctcttcttttcttggttaaccttgctaatggtctatcaattttatttatcttttcaaagaaccaggtttttgtttcatttatcttttgtattt---------------ttgttgttgttgttt---caatttcatttagttctgctctgatcttggttatttcctttcttctgctgggtttgggtttggtttgttcttgtttctctaattccttaaggtgtaaccttagattgtcagtttgtgctctttcagattttttaggtaggcatttagggctatg---aacttccctcttagcactgcctttgctgtatcctagaggtttcgatgggttgtgtcattattgtcgttcagttcaaagaa-----------tttttttttttttttttttgagatggagtttcgctcttgttgcccag--------------------------------------------------------------------------------------gctggagtgtagtggcacaatctcggctgattgcaacctccgcctcccgggttcaagtgattctcctccctcaggatcccaagtagctgggattataggcat----------ccaccaccatgcccagctaatcttttgtatttttagtagagattgggtttcacca-gttggccagactggtcttgaactcctggtctcaggtgatccaccagcctcagcctcccaaagcgctgggattacaggcatgagccaccgtgcctggccctgaagaattttttaatttccatcttgatttcatttttgacccagt-gtcattcaggagcagattatttaatttccatgtatttgcatgattctgaaggttccttttggagttgatttccagttttatttcactgtggtctgagagagtgcttgatataatttcaattttcttaaatttattgaggcttattttgagacctatcatat-gtctatctcggagaaagctccatgcgctgttgaatagaatgtgtattctgcagttgttgggtagaatgttctgtaaatacctgttaagtccatttgttccagggtatagtttaaatccactgtttctttgttgactttctgt-ttgat-acctgtctagtgctgtcagtggagtgttgcagtcccccactattactgtgttgctgcctatctcatttctcagttctgttactaattgttttataaatttgggagctccagtgttaggtgcatatttatttaggattgtgatattttcctgttggacaaggccttttatcattatataatgaccctctttgtcttttttaaccactgttgctttaaagtttattttgtctgatataagaatggctac-actgctcacttttggtgtccatttgcatggaatgcctttttctatccctttaccttaagtttatgtgagtccttatgtgttaggcatgtctcttgaaggcagcagatggttggtgaattcttatccattctgcaattctgtatcttttaagtggagcatttagaccatttacattcaatgttagtactgagatgtgaggtatcattccattcattgtgatatttgttgcctgtacaccttggg-ttttgtgattttgctg--gtttttt-tcattgtatttttgttgtataggtcctgtgagatttatgctttaaagaggttgtgttttgatgtgtttccaggatttgtttcaagatttagagctccttttagcagttcttgtagtgctgccttggtaggggtgaattttctcatcatttgtttgtctgagaaagattgttatctttccttcatttatgaagcttagctttgctggataccacatttttggtggataattgttttgtctgaggaggctgaagat-gggtcccaatcccttctagcttgtagggtttctgctgagaaatctgctgttaatctgataggtttttactttataggttacctggtgtttttgtttcacagctcttaagattcttttcgtcatcttaactttaggtaacctgatgacaatgtgcctg------ggcaatgatcttttagcaatgaattctccaggtgttctttgagcctcttgtatttggtgtctaggtctccagcaaggccagggaggttttcctcgattattccccaaaataaactttccaaac-tttagatttctcttcttcctcaggaatgctaattattcctaggtttggtcactagacataatcccagacatcttggag i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1129454 4422 + 81552678 ggtgtttttccatagtggttgtactaatttacattcccaccagca-gggtagaagtgttgttcccttttcaccacatccacaccaacatctattgtttgttga-ttttttt--attatggccattcttgccagagtaaggtgctattgcattgtgttttgatttgcatttccctgatcattagtgatgttgagcattttttcatatgtttgttggccatgtgtatgtcttcttttgagaattctctattcatgtccttatcccactttttgatgggattgtttggtttttcttactgatttgtttgagttcattgtggattctggacattaatcctttgtcagatgtgtagattgtgaagattttttcccactctgtgagttgtctgtttactctgctgactgttccttttgctgtgcaaaaactctttagtttaa--aagtcccaactatttatctttgtttttattgactttgcttttgtgttcttggtcattaaatccttgcctgagccaatatctagaagagtttttccaatcttatcgtctagagtttttacagtttcaggtcttagacttaagtccttgatccatcttgagttgtttttgtataaggtgagagatgaggatctagtttcattctccctacacatggcttgccaattatcacagcatcatcagttgtgtagggtgtcctttgcccactttatgtttttgtttgcattgtggaagatcaattggctgtaagtatttgggtttatttctgggttctctattctgttccattcatctatgtgtttatttttgtaccagtgctatgctgttttggtgactatggccttatagtatagtttgaaatcaagtaatgtaatgcctccagatttgttccttctgcttagttttgctttggctatgcaggctcttttttgattccatatgaattttagga-tttttttttctaatttgatgaagaatgatggtggta-ttttgatgggaattgtgttgaatttgtagattgcttttggcagtatggttgttttcacaatattgactctacctatccatgtgcatgcgatgtgtcccatttgtatgtgttgtctgtgttttttttaagcagtgttttgttttgtagttttccttgtagaggtctttcacctccttgattaggtatatttctaagtattt-----------------------------------------------------tcttttttt-------------------------gcagctattgtagaagggattgagttcttgatttgattctcagcttggtcgctgttggtgtatagaagagctactg----------------------att---------------------tgtatccagaaatttttctgaattattttatcagttctaggagctttctggaggagtctttagggttttctaggtaaacaatcatatcatcagcaaacagcaacagtttgacttcctcttcaccgatttggatgccctttatttcttttgtctgattgctctggctaggacttcgagtactatgttgaagaggagtggtgagagtgggcatccttgtcttgttccagttcctagaggaaatgctttcaacttttccccattcagaattatgttggctgtgagtttctcatagatggcttttgtttcattgagatatttcccttgtatgccgattttgctgagttttaatcataaagggatgttggatcttgttgaatgctttttatgcatctatcgagatgatcatgtgatttctgcttttgattctgtttacatggtgtatcacatttattgacttgtgtatgtgaagccatccctgcatccctggtatgaaacccacctgatcatggtggattatctttttgatatgcattggatttggttagctagtattttgttaaggattttagcatctatgttcatcagggatattggtctgtagttttcttttttggttgtgtcctcttctggttttactattagggtgatactggcctcacagaatgatttgggaaaggttgcctgtttctctatcttgtggagtagtgtgaataggattggtaacaattcttctttgaatgtctggcagaattctgctgtgaatctgtctagtcctggactttttttgttggtaatttttgtattaccatttcagtcttactgcttcttattgttcaaggtatctaattcttcctgatttaagctaggagggttatatctttccgggaatttattcatctcttctaggtttcctagttgatgggcataaaggtgttcatagtagccatgaatgatcttttgtatttcagtggtgtcagttgtaatagctcccattttgcttctaattgagcttatttggattttctctcttcttttcttggttaaccttgctaatggcctatcaattttatttatcttttcaaagaaccaggtttttgtttcatttatcttttgtattt---------------ttgttgttgttgttgtttcaatttcatttagttctgctctgatcttggttatttcctttcttctgctgggtttgggtttggtttgttcttgtttctctaattccttaaggtgtaaccttagattgtcagtttgtgct-tttcagattttttatgtaggcatttagggctatg---aactttcctcttagcaccgcctttgctgtatcctagaggtttcgataggttgtgtcattattgtcgttcagttcaaagaa-----------ttttttttttttt-----tgagatggagtttcgctcttgttgcccag--------------------------------------------------------------------------------------gctggagtgtagtggcacaatctcggctgactgcaacctccacctcccaggttcaagtgattctcctccctcaggatcccgagtagctgggattataggcat----------ccaccaccacgcccagctaatcttttgtatttttagtagagattgggtttcaccatgttggccagactggtgtcgaactcctgatctcaggtgatccaccggcctcggcctcccaaagcactgggattacaggcgtgagccatcgcgcctggtcccgaagaattttttaatttccatcttgatttcatttttgacacagt-gtcattcaggagcaggttatttattttccatgtatttgcatggttttgaaggttccttttggagttgatttccagttttattctactgtggtgtgagagagtgc-tgatataatttcaattttcttaaatttattgaggctcattttgagacctatcatatggtctgtctcggagaaagttccatttgctgttgaatagaatgtgtattctgcagttgttgggtagaatgttctgtaaatacctgttaagtccatttgttccagggtatagtttaaatccactgtttctttgttgactttctgtcttgatgacctgtctagtgctgtcagtggagtgttgcagtcccccactattactgtgttgccgtctatctcatttctcagttctattagtaattgttttatcaatttgggagctccagtgttaggtgcatatttatttaggattgtgatattttcctgttggacgcggccttttatcattatataatgaccctctttgtcttttttaaccactgttgctttaaagtttattttgtctgatctaagaatagctac-cctgctcgcttttggtgtccatttgcatggaatgcctttttctactcctttaccttaagtttttgtgagtccttatgtgttaggcatgtctcttgaaggcaacagatggttggtgaattcttatccattctgcaattctgtatcttttaagtggagcatttagaccatttacattcaatgttagtattgagatgtgaggtatcattccattcattgtgctatttgttgcctgtataccttgggtttttgtgattttgctgttttttttt-tcattgtatttttgttttataggtcctgtgagatttatgcttcaaagaggttgtgttttgatgtgtttccaggatttgtttcaagatttagagctccttttagcagttctcgtagtgctgccttggtaggggtgaattttttcatcatttgtttgtctaagaaagattgttatctttccttcatttatgaagcttagctttgctggataccacatttttggtggataattgttttgtctgaggaggctgaagat-gggccccaatcccttctagcttgtagggtttctgctgagaaatctgctgttaatctgataggtttttactttgtagattacctggtgtttttgtctcacagctcttaagattcttttcttcatcttaactttaggtaacctgatgacaatgtgcctgggcaatggcaatgatcttttagcaatgaattctccaggtgttctttgagcctcttgtatttggtgtctaggtctccagcaaggccagggaggttttcctcgattattccccaaaataaactttccaaacttttagatttctcttcttcctcaggaatgctaattattcctaggtttggtcatttgacctaatcccagacgtcttggag i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1458868 4448 + 108979918 ggtg-ttttcagtagtggttgtactaatttacattcccaccagca-gggtagaagtgttgctcccttttcaccacatccacaccaacatctattatttgttgatttttttt--attgtggccatccttgccagagtaaggtgctattgcattgcgttttgatttgcattt-cctgatgattagtgatgttgagcattttttcatacgtttgttggccatttgtgtatcttcttttgagaattctctattcatgcccttagccca-tttttgatgcgattgtttggttttccttactgatttgtttgagttcattgtagattctggatattaatcctttgtcagatgtatggattgtgaagattt--------tctgtgaggtgtctgtttactctgctgattgttctttttgctgtgcacaagctctttagtttaattaagtcccaactatttatctttgtttttattgaatttgcttttgggttcttggttgttaaatccttgcctgagccaatgtctggaagagtttttccaatattatcttctagagtttttatagtttcaggtcttagacttaagtccttgatccatcttgagttgtttctatataaggtgagagatgaggatctagtttcattct-cctgcacatggcttgccagttatcgcagcatcatttgttgaataggaggtcctttgcccactttttgtttttgttcgcattgttgaagatcaattggctgtaagtatttgggtttatttctgggttctctattctcttccattggtctatgtgcttatttttatacccatactatgctgtttgggtgactatggccttacagtatagtttgaaatcaagttatgtgatgcctccagatttgttctttctgcttgatcttgccttggctatgcaggctctttttgggtttcatatgaattttaggagtttttttttctaatttggtgaagaatgatggtgatatttttgatgggaattgtgtcgaattaatagattgcttttggcagtatggttgtttttacaatattgactctacccatccatgagtatgggatgtgtccgatttgtttgtgttggctgtagtttttttcagcagtgttttattttgtagttttccttgtagaggtctttcacttccttggttaggtatatttctaagtttttc---------------------------------------ttttctttct---tttctttct-----ttttttttttttttttttttgcagctcttgtagaaggggttgagttcttgatttgattcccagcttgatcgctgttggtgtatagaagagctactg----------------------att------tgtgtacattaatcttgtatctggaaac--tgctgtattcttttatcagttctaggagctttctggtagagtccttagagttttcaaggtaaacgataatatcttcagcaaacagtgacagattgacttcctcttcgctgatttggatgccctttatttcttttgtctgattgctctggctaggacttccagtactatgttgaagaggagtggtgagggtgggcatccttgtcttgttccacttctcagagggaatgctttaaacttttccctattcagaattatgttggctgtgagtttgtcatagatggcttttattacattgaggtatttcccttgtatgcctattttgctgagttttcatcataaaaggatgctggatcttgtcgaatactttttatgcatctattgagacaatcatgtgatttctgcttttgattctgtttacatggtgtatcacatttattgacttgtgtatgttaagccatccctgcatccctggtacgaaacccacctgatcatggtggattatctttttgatatgcgttggacttggttagctagtattttgttaaggatttgagcatctatgtttgtcagggatattggtctgtagttttcttttttggttatgtccttttctggttttactattagggtgatactggcatcatagaatgatttaggaagggttgcctgtttctctgtcttgtggagtagtgtcagtaggattggtaacaa---ttctttgaatgtctggcagaattctgctgtgaatctgtctgg-cctggactttttttgttggtaatttttgtgttaccatttcaatcttactgcttgttattgttcagggtatctaattcttcctgatttaagctaggagggttatatctttccagaaatttatccatctccgctaggtttcctagttgatgtgcataaaggtgttcatagtagccatgaatgatcttttgtatttcagtggtgccagttgtaatatctcccatttcgcttctaattgagcttatttggattttctgtcttcttttcttggttaaccttgctaatggtctatcaattttatttatcttttcaaagaaccaggtttttgtttcatttatcttttgtattt------------ttattgttgttgttgttt---cagtttcatttagttctgctctgatcttggttatttcctttcttctgctgggttcgggtttggtttgttcttgtttctctaattccttaaggtgtaaccttagattgtcagtttgtgctctttcagattttttatgtaggcatttagggctatg---aactttcctcttagcacggcctttgctgtatcctagaggttttgataggttgtgtcattattgtcgttcagttcgaagaa-----------ttttttttttttt------gagatggagtttcactcttgttgcccag--------------------------------------------------------------------------------------gctggagtgtagggacgcaatctcggctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcaggatcccgaatagctgggattacaggcttccaccaccacccaccaccacgcctagctaatcttttgtatttttagtagagatggagtttcaccatgttggccagactggtctggaactcctgatctcaggtgatccactggcctcggcctcccaaagtgctaggattacaggcatgagccacggcacctggccccgaagaattttttaatttccatcttgatttcatttttgacccagtggtcattcaggagcaggttgtttcatttccatgtatttgcatggttttgaaggttccttttggagttgatttccagttttattccactgtggtctgagagagtgcttaatataatttcagttttcttaaatttattgaggctcattttgagacctatcatatggtctatctcagagaaagttccatgtactgttgaatagaatgtgtattctgtggttgttgggtagaatgttctgtaaatatctgttaagtccatttgttctagggtatagttta----cactgtttctttgttgactttctatcttgatgacctgtctagggctatcagtggagtattgaagtgccccactattattgtgttgctgtctatctcatttcttagttctattagtgattgttttataaatttgggagctccagggttaggtgcatctttatttaggattgtgatattttcttgttggacaaggccttttatcat--tataatgaccctctttgtcttttttaactactgttgctttaaagtttattttgtctgatataagaatagctactccagcttgctttcggtgtctatttacatggcatgcctttttctacc------ccttaagtttatgtgagtccttatgtgttaggcatgtctcttgaaggcagcagatggttgcttaattcttatccattctgcaattctgtatcttttaagtggagcatttagaccatttacattcaatggtagtactgagatgtgaggtatcattccagtcattgtgctatttgttgcctgtacaccttgggtttttgtgattttgctg--tttttct-aaattgtatttttgttttataggtcctgtgagatttatgctttaaagaggttgtgtttggatgtgtttccaggatttgtttcaagatttagagctccttttagcagttcttgtagtgctgccttggtaggggtgaattttctcatcatttgtttgtctaacaaagattg-tatctttccttcgtttatgaagcttagcttcactggatacaacatttttggctgataattgttttgtttgaggaggctaaagatagggccccaaacccttctagcttgtagggtttctgctgagaaatctgctgttaatctggtaagtttttcctttgtaggttacctggtgtttttgactcacagctcttaagattcttttcttcatcttaactttaggtaacctgatgacaatgtgcctg------ggcaatgatcttttagcaatgaattctccaggtgttctttgagcctcttgtatttggtgtctaggtcttcagcaaagccagggaagttttcctctattattccccaaaataaactttccaaacttttagatttctcttcttcctcaggaacactaattattcctagatttggtcatttgacataatcccagacattttggag i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1431304 4453 - 111193037 ggtg-ttttcagtagtggttgtactaatttacattcccaccagca-gggtagaagtgttgctcccttttcaccacatccacaccaacatctattatttgttgatttttttt--attgtggccatccttgccagagtaaggtgctattgcattgcgttttgatttgcattt-cctgatgattagtgatgttgagcattttttcatacgtttgttggccatttgtgtatcttcttttgagaattctctattcatgcccttagccca-tttttgatgcgattgtttggttttccttactgatttgtttgagttcattgtagattctggatattaatcctttgtcagatgtatggattgtgaagattt--------tctgtgaggtgtctgtttactctgctgattgttctttttgctgtgcacaagctctttagtttaattaagtcccaactatttatctttgtttttattgaatttgcttttgggttcttggtcgttaaatccttgcctgagccaatgtctggaagagtttttccaatattatctcctagagtttttatagtttcaggtcttagacttaagtccttgatccatcttgagttgtttctgtataaggtgagagatgaggatctagtttcattct-cctgcacatggcttgccagttatcgcagcatcatttgttgaataggaggtcctttgcccactttttgtttttgttcgcattgttgaagatcaattggctgtaagtatttgggtttatttctgggttctctattctcttccattggtctatgtgcttatttttatacccatactatgctgtttgggtgactatggccttacagtatagtttgaaatcaagttatgtgatgcctccagatttgttctttctgcttgatcttgccttggctatgcaggctctttttgggtttcatatgaattttaggagtttttttttctaatttggtgaagaatgatggcgatatttttgatgggaattgtgtcgaattaatagattgcttttggcagtatggttgtttttacaatattgactctacccatccatgagtatgggatgtgtccgatttgtttgtgttgtctgtagtttttttcagcagtgttttattttgtagttttccttgtagaggtctttcacttccttggttaggtatatttctaagtttttc---------------------------------------ttttctttctttctttctttct---ttttttttttttttttttttttgcagctattgtagaaggggttgagttcttgatttgattcccagcttgatcgctgttggtgtatagaagagctactg----------------------att------tgtgtacattaatcttgtatctggaaac--tgctgtattcttttatcagttctaggagctttctggtagagtccttagagttttcaaggtaaacgataatatcttcagcaaacagtgacagattgacttcctcttcgctgatttggatgccctttatttcttttgtctgattgctctggctaggacttccagtactatgttgaagaggagtggtgagggtgggcatccttgtcttgttccacttctcagagggaatgctttcaacttttccctattcagaattatgttggctgtgagtttgtcatagatggcttttattacattgaggtatttcccttgtatgcctattttgctgagttttcatcataaaaggatgctggatcttgtcgaatactttttatgcatctattgagacaatcatgtgatttctgcttttgattctgtttacatggtgtatcacatttattgacttgtgtatgttaagccatccctgcatccctggtacgaaacccacctgatcatggtggattatctttttgatatgcgttggacttggttagctagtattttgttaaggattttagcatctatgtttgtcagggatattggtctgtagttttcttttttggttatgtccttttctggttttactattagggtgatactggcatcatagaatgatttaggaagggttgcctgtttctctgtcttgtggagtagtgtcagtaggatcggtaacaa---ttctttgaatgtctggcagaattctgctgtgaatctgtctgg-cctggactttttttgttggtaatttttgtgttaccatttcaatcttactgcttgttattgttcagggtatctaattcttcctgatttaagctaggagggttatatctttccagaaatttatccatctccgctaggtttcctagttgatgtgcataaaggtgttcatagtagccatgaatgatcttttgtatttcagtggtgccagttgtaatatctcccatttcgcttctaattgagcttatttggattttctgtcttcttttcttggttaaccttgctaatggtctatcaattttatttatcttttcaaagaaccaggtttttgtttcatttatcttttgtattt------------ttattgttgttgttgttt---cagtttcatttagttctgctctgatcttggttatttcctttcttctgctgggttcgggtttggtttgttcttgtttctctaattccttaaggtgtaaccttagattgtcagtttgtgctctttcagattttttatgtaggcatttagggctatg---aactttcctcttagcacggcctttgctgtatcctagaggttttgataggttgtgtcattattgtcgttcagttcgaagaa-----------ttttttttttttt------gagatggagtttcactcttgttgcccag--------------------------------------------------------------------------------------gctggagtgtagggacacaatctcggctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcaggatcccgaatagctgggattacaggcttccaccaccacccaccaccacgcctagctaatcttttgtatttttagtagagatggagtttcaccatgttggccagactggtctggaactcctgatctcaggtgatccactggcctcggcctcccaaagtgctaggattacaggcgtgagccacggcacctggccccgaagaattttttaatttccatcttgatttcatttttgacccagtggtcattcaggagcaggttgtttcatttccatgtatttgcatggttttgaaggttccttttggagttgatttccagttttattccactgtggtctgagagagtgcttaatataatttcagttttcttaaatttattgaggctcattttgagacctatcatatggtctatctcagagaaagttccatgtactgttgaatagaatgtgtattctgtggttgttgggtagaatgttctgtaaatatctgttaagtccatttgttctagggtatagttta----cactgtttctttgttgactttctatcttgatgacctgtctagggctatcagtggagtattaaagtgccccactattattgtgttgctgtctatctcatttcttagttctattagtgattgttttataaatttgggagctccagggttaggtgcatacttatttaggattgtgatattttcttgttggacaaggccttttatcat--tataatgaccctctttgtcttttttaactactgttgctttaaagtttattttgtctgatataagaatagctactccagcttgctttcggtgtccatttacatggcatgcctttttctacc------ccttaagtttatgtgagtccttatgtgttaggcatgtctcttgaaggcagcagatggttgcttaattcttatccattctgcaattctgtatcttttaagtggagcatttagaccatttacattcaatggtagtattgagatgtgaggtatcattccagtcattgtgctatttgttgcctgtacaccttgggtttttgtgattttgctg--tttttct-aaattgtatttttgttttataggtcctgtgagatttatgctttaaagaggttgtgtttggatgtgtttccaggatttgtttcaagatttagagctccttttagcagttcttgtagtgctgccttggtaggggtgaattttctcatcatttgtttgtctaacaaagattg-tatctttccttcgtttatgaagcttagcttcactggatacaacatttttggctgataattgttttgtttgaggaggctaaagatagggccccaaacccttctagcttgtagggtttctgctgagaaatctgctgttaatctggtaagtttttcctttgtaggttacctggtgtttttgactcacagctcttaagattcttttcttcatcttaactttaggtaacctgatgacaatgtgcctg------ggcaatgatcttttagcaatgaattctccaggtgttctttgagcctcttgtatttggtgtctaggtcttcagcaaagccagggaagttttcctctattattccccaaaataaactttccaaacttttagatttctcttcttcctcaggaacactaattattcctagatttggtcatttgacataatcccagacattttggag i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1459179 4565 + 3644372 ggtg-ttttcagtagtggttgtactaatttacattcccaccagca-gggtagaagtgttgctcccttttcaccacatccacaccaacatctattatttgttgatttttttt--attgtggccatccttgccagagtaaggtgctattgcattgcgttttgatttgcattt-cctgatgattagtgatgttgagcattttttcatacgtttgttggccatttgtgtatcttcttttgagaattctctattcatgcccttagccca-tttttgatgcgattgtttggttttccttactgatttgtttgagttcattgtagattctggatattaatcctttgtcagatgtatggattgtgaagattt--------tctgtgaggtgtctgtttactctgctgactgttctttttgctgtgcacaagctctttagtttaattaagtcccaactatttatctttgtttttattgaatttgcttttgggttcttggtcgttaaatccttgcctgagccaatgtctggaagagtttttccaatattatcttctagagtttttatagtttcaggtcttagacttaagtccttgatccatcttgagttgtttctgtataaggtgagagatgaggatctagtttcattct-cctgcacatggcttgccagttatcgcagcatcatttgttgaataggaggtcctttgcccactttttgtttttgttcgcattgttgaagatcaattggctgtaagtatttgggtttatttctgggttctctattctcttccattggtctatgtgcttatttttatacccatactatgctgtttgggtgactatggccttacagtatagtttgaaatcaagttatgtgatgcctccagatttgttctttctgcttgatcttgccttggctatgcaggctctttttgggtttcatatgaattttaggagtttttttttctaatttggtgaagaatgatggtgatatttttgatgggaattgtgtcgaattaatagattgcttttggcagtatggttgtttttacaatattgactctacccatccatgagtatgggatgtgtccgatttgtttgtgttgtctgtagtttttttcagcagtgttttattttgtagttttccttgtagaggtctttcacttccttggttaggtatatttctaagtttttcttttcttttctt----------------ttctttcctttttttctttctttctttctttctttcttttttttttttttttttttttgcagctattgtagaaggggttgagttcttgatttgattcccagcttgatcgctgttggtgtatagaagagctactg----------------------att------tgtgtacattaatcttgtatctggaaac--tgctgtattcttttatcagttctaggagctttctggtagagtccttagagttttcaaggtaaacgataatatcttcagcaaacagtgacagattgacttcctcttcgctgatttggatgccctttatttcttttgtctgattgctctggctaggacttccagtactatgttgaagaggagtggtgagagtgggcatccttgtcttgttccacttctcagagggaatgctttaaacttttccctattcagaattatgttggctgtgagtttgtcatagatggcttttattacattgaggtatttcccttgtatgcctattttgctgagttttcatcataaaaggatgttggatcttgtcgaatactttttatgcatctattgagacaatcatgtgatttctgcttttgattctgtttacatggtgtatcacatttattgacttgtgtatgttaagccatccctgcatccctggtacgaaacccacctgatcatggtggattatctttttgatatgcgttggacttggttagctagtattttgttaaggattttagcatctatgtttgtcagggatattggtctgtagttttcttttttggttatgtccttttctggttttactattagggtgatactggcatcatagaatgatttaggaagggttgcctgtttctctgtcttgtggagtagtgtcagtaggattggtaacaa---ttctttgaatgtctggcagaattctgctgtgaatctgtctgg-cctggactttttttgttggtaatttttgtgttaccatttcaatcttactgcttgttattgttcagggtatctaattcttcctgatttaagctaggagggttatatctttccagaaatttatccatctccgctaggtttcctagttgatgtgcataaaggtgttcatagtagccatgaatgatcttttgtatttcagtggtgccagttgtaatatctcccatttcgcttctaattgagcttatttggattttctgtcttcttttcttggttaaccttgctaatggtctatcaattttatttatcttttcaaagaaccaggtttttgtttcatttatcttttgtattt------------ttattgttgttgttgttt---cagtttcatttagttctgctctgatcttggttatttcctttcttctgctgggttcgggtttggtttgttcttgtttctctaattccttaaggtgtaaccttagattgtcagtttgtgctctttcagattttttatgtaggcatttagggctatg---aacttttctcttagcacggcctttgctgtatcctagaggttttgataggttgtgtcattattgtcgttcagttcgaagaa-----------ttttttttttttt------gagatggagtttcactcttgttgcccagtgaagcttagcttcactggatacaacatttttggctgataattgttttgtttgaggaggctaaagatagggccccaaacccttctagctggagtgtagggacacaatctcggctcactgcaacctctgcctcccaggttcaagtgattctcctgcctcaggatcccgaatagctgggattacaggcttccaccaccacccaccaccacgcctagctaatctttcgtatttttagtagagatggagtttcaccatgttggccagactggtctggaactcctgatctcaggtgatccactggcctcggcctcccaaagggctaggattacaggcgtgagccacggcacctggccCcgaagaattttttaatttccatcttgatttcatttttgacccagtggtcattcaggagcaggttgtttcatttccatgtatttgcatggttttgaaggttccttttggagttgatttccagttttattccactgtggtctgagagagtgcttaatataatttcagttttcttaaatttattgaggctcattttgagacctatcatatggtctgtctcagagaaagttccatgtactgttgaatagaatgtgtattctgtggttgttgggtagaatgttctgtaaatatctgttaagtccatttgttttagggtatagttta----cactgtttctttgttgactttctatcttgatgacctgtctagggctatcagtggagtattgaagtgccccactattattgtgttgctgtctatctcatttcttagttctattagtgattgttttataaatttgggagctccagggttaggtgcatatttatttaggattgtgatattttcttgttggacaaggccttttatcat--tataatgaccctctttgtcttttttaactactgttgctttaaagtttattttgtctgatataagaatagctactccagcttgctttcggtgtccatttacatggcatgcctttttctacc------ccttaagtttatgtgagtccttatgtgttaggcatgtctcttgaaggcagcagatggttgcttaattcttatccattctgcaattctgtatcttttaagtggagcatttagaccatttacattcaatggtagtattgagatgtgaggtatcattccagtcattgtgctatttgttgcctgtacaccttgggtttttgtgattttgctg--tttttct-aaattgtatttttgttttataggtcctgtgagatttatgctttaaagaggttgtgtttggatgtgtttccaggatttgtttcaagatttagagctccttttagcagttcttgtggtgctgccttggtaggggtgaattttctcatcatttgtttgtctaacaaagattg-tatctttccttcgtttatgaagcttagcttcactggatacaacatttttggctgataattgttttgtttgaggaggctaaagatagggccccaaacccttctagcttgtagggtttctgctgagaaatctgctgttaatctggtaagtttttcctttgtaggttacctggtgtttttgactcacagctcttaagattcttttcttcatcttaactttaggtaacctgatgacaatgtgcctg------ggcaatgatcttttagcaatgaattctccaggtgttctttgagcctcttgtatttggtgtctaggtcttcagcaaagccagggaagttttcctctattattccccaaaataaactttccaaacttttagatttctcttcttcctcaggaacactaattattcctagatttggtcatttgacataatcccagacattttggag i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1413698 4453 - 10304083 ggtg-ttttcagtagtggttgtactaatttacattcccaccagca-gggtagaagtgttgctcccttttcaccacatccacaccaacatctattatttgttga-ttttttt--attgtggccatccttgccagagtaaggtgctattgcattgcgttttgatttgcattt-cctgatgattagtgatgttgagcattttttcatacgtttgttggccatttgtgtatcttcttttgagaattctctattcatgcccttagccca-tttttgatgcgattgtttggttttccttactgatttgtttgagttcattgtagattctggatattaattctttgtcagatgtatggattgtgaagattt--------tctgtgaggtgtctgtttgctctgctgactgttccttttgctgtgcacaagctctttagtttaattaagtcccaactatttatctttgtttttattgaatttgcttttgggttcttggtcattaaatccttgcctgagccaatgtctggaagagtttttccaatattatcttctagagtttttatagtttcaggtcttagacttaagtccttgatccatcttgagttgtttctgtataaggtgagagatgaggatctagtttcattct-cctgcacatggcttgccagttatcgcagcatcatttgttgaataggaggtcctttgcccactttttgtttttgtttgcattgttgaagatcaattggctgtaagtatttgggtttatttctgggttctctattctcttccattggtctatgtgcttatttttatgcccatactatgctgtttgggtgactatggccttacagtatagtttgaaatcaagttatgtgatgcctccagatttgttctttctgcttgatcttgccttggctatgcaggctctttttgggtttcatatgaattttaggag-ttttttttctaatttggtgaagaatgatggtgatatttttgatgggaattgtgtcgaattaatagattgcttttggcagtatggttgtttttacaatattgactctacccatccatgagtatgggatgtgtccgatttgtttgtgttgtctgtattttttttcagcagtgttttattttgtagttttccttgtagaagtctttcacctccttggttaggtatatttctaagtttttc---------------------------------------ttttcttttct--tttctttcc----ttttttttctttctttcttttgcagctattgtagaaggggttgagttcttgatttgattcccagcttgatcgctgttggtgtatagaagagctactg----------------------att------tgtgtacattgatcttgtatctggaaac--tgctgtattcttttatcagttctaggagctttctggtggagtcctgagagttttcaaggtaaacgataacatcttcagcaaacagtgacagactgacttcctcttcgctgatttggatgcccgttatttctttcgtctgattgctctggccaggacttccagtaccatgttgaggaggagtggtgagggtgggcatccttgtcttgttccacttctcagagggaatgctttgaacttttccctgttcagaattatgttggctgtgagtttgtcatagatggcttttattacattgaggtatttcccttgtatgccttttttgctgagttttcatcataaaaggatgctggatcttgtcgaatcctttttatgcatctattgagacaatcatgtgatttctgcttttgattctgtttacacggtgtatcacatttattgacttgtgtatgttaagccatcctggcatccctggtatgaaacccacctgatcatggtggattatctttttgatatgcgttggacttggttagctagtattttgttaaggattttagcatctatgtttgtcagggatattggtctgtcgttttcttttttggttatgtccttttctggttttactattagggtgatactggcatcatagaatgatttaggaagggttgcctgtttctccgtcttgtggagtagtgtcagtaggattggtaacaa---ttctttgaatgtctggcagaattctgctgtgaatctgtctgg-cctggactttttttgttggtaatttttgtgttaccatttcaatcttactgcttgttattgttcagggtatctaattcttcctgatctaagctaggagggttatatctttccagaaatttatccatcgcctctaggtttcctagttggtgtgcataaaggtgttcatagtagccatgaatgatcttttgtatttcagtggtgccagttgtaatatctcccattttgcttctaattgagcttatttggattttctgtcttcttttcttggttaaccttgctaatggtctatcagttttatttatcttttcaaagaaccaggtttttgtttcatttatcttttgtattt------------ttattgttgttgttgttt---caatttcatttagttctgctctgatcttggttatttcctttcttctgctgggttcgggtttggtttgttcttgtttctctaattccttaaggtgtaaccttagattgtcagtttgtgctctttcagattttttatgtaggcatttagggctatgcctacatagcctcttagcacggcctttgctgtatcctagaggttttgataggttgtgtcattattgtcattcagttcaaagaa---------ttttttttttttttt------gagatggagtttcactcttgttgcccag--------------------------------------------------------------------------------------gctggagtgtagggacacaatctcggctcactgcaacctccgcctcccgggttcaagtgattctcctgcctcaggatcccgagtagctgggattacaggcttccaccaccacccaccaccacgcctagctaatcttttgtatttttagtagagatggagtttcaccatgttggccagactggtctggaactcctgatctcaggtgatccactggcctcggcctcccaaagtgctaggattacaggcgtgagccaccgtacctggccccgaagaattttttaatttccatcttgatttcatttttgacccagtggtcattcaggagcaggttgtttcatttccatgtatttgcatggttttgaaggttccttttggagttgatttccagttttattccactgtggtctgagagagtgcttaatataatttcagttttcttaaatttattgaggctcattttgagacctatcatatggtctatctcagagaaagttccatgtactgttgaatagaatgtgtattctgtggttgttgggtagaatgttctgtaaatatctgttaagtccatttgttctagggtatagttta----cactgtttctttgttgactttctatcttgatgacctgtctagggctatcagtggagtattgaagtgccccactattattgtgttgctgtctatctcatttcttagttctattagtgattgttttctaaatttgggagctccagggttaggtgcatatttatttaggattgtgatattttcttgttggacaaggccttttatcat--tttaatgaccctctttgtcttttttaactactgttgctttaaagtttactttgtctgatataagaatagctactccagcttgctttcggtgtccatttacatggcatgcctttttctacc------ccttaagtttatgtgagtccttatgtgttaggcatgtctcttgaaggcagcagatggttgcttaattcttatccattctgcaattctgtatcttttaagtggagcatttagaccatttacattcaatggtagtattgagatgtgaggtatcattccagtcattgtgctatttgttgcctgtacaccttgggtttttgcgattttgctg--tttttct-aaattgtatttttgttttataggtcctgtgagatttatgctttaaagaggttgtgtttggatgtgtttccaggatttgtttcaagatttagagctccttttagcagttcttgtagtgctgccttggtaggggtgaattttctcatcatttgtttgtctaacaaagattg-tatctttccttcgtttatgaagcttagcttcactggatacaacatttttggctgataattgttttgtttgaggaggctaaagatagggccccaaacccttctagcttgtagagtttctgctgagaaatctgctgttaatctgataagtttttcctttgcaggttacctggtgtttttgtctcacagctcttacgattcttttcttcatcttaactttaggtaacctgatgacaatgtgcctg------ggcaatgatcttttagcgatgaattctcctggtgttctttgagcctcttgtatttggtgtctaggtcttcagcaaagccagggaagttttcctctattattccccaaaataaactttccaaacttttagatttctcttcttcctcaggaacactaattattcctagatttggtcatttgacataatcccagacatcttggag i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1490740 4478 - 107702431 ggtg-ttttcagtagtggttgtactaatttaccttcccaccagcaggggtagaagggttgctcccttttcaccacatccacaccaacatctattatttgttga-ttttttt--attgtggcca--cttgccagagtaaggtgctattgcattgcgttttgatttgcattt-cctgatgattagtgatgttgagcattttttcatatgtttgttggccatttgtgtatcatcttttgagaattctctattcatgcccttagccca-tttttgatgcgattgtttggttttccttactgatttgtttgagttcattgtagattctggatattaatcctttgtcagatgtatggattgtgaagattt--------tctgtgaggtgtctgtttactctgctgactgttccttttgctgtgcacaagctctttagtttaattaagtcccaactatttatctttg-atttattgaatttgcttttgggttcttggtcattaaatccttgcctgagccaatgtctagaagagtttttccaatgttatcttctagagttttgatagtttcaggtcttagacttaagtccttgattcatcttgagttgtttctgtataaggtgagagatgaggatctagtttcattct-cttacacatggcttgccagttatcgcagcatcatttgttgaataggaggtcctttgcccactttttgtttttgtttgcattgttgaagatcaattagctgtaagtatttgggtttatttctgggttctctattctcttccattggtctatgtgcttatttttatacccatactatgctgtttgagtgactatggccttacagtatagtttgaaatcaagtaatgtgatgcctccagatttgttctttctgcttgatcttgctttggctatgcaggctctttttgggttccatatgaattttaggattttttttttctaatttggtgaagaatgatggtgata-ttttgatgggaattgtgtcgaattaatagattgcttttggcagtatggttgtttttacaatattgactctacccatccatgagtatgggatgtgtcccatttgtttgtgttgtctgtagtttttttcagcagtgttttattttgtagttttccttgtagaggtctttcacctccttggttaggtatatttctaagtatttcttttcttttctt----------------ttttttcctttttttctttctttctttctttct----------ttttctttcttttttgcagctattgtagaaggggttgagtttttgatttgattcccagcttgatcgctgttggtgtgtagaagagctactg----------------------att------tgtgtacattaatcttgtatctggaaac--tgctgtattcttttatcagttctaggagctttctggtagagtccttagagttttcaaggtaaacgataatatcttcagcaaacagtgacagactgacttcctcttcgctgatttggatgccctttatttctttcgtctgattgctctggctaggacttccagtaccatgttgaagaggagtggtgagggtgggcatccttgtcttgttccacttctcagagggaatgctttaaacttttccctattcagaattatgttggctgtgagtttgtcatagatggcttttattacattgaggtatttcccttgtatgcctgttttgctgagttttcatcataaagggatgctggatcttgtcgaatactttttatgcatctattgagacgatcatgtgatttctgcttttgattctgtttacatggtgtatcacatttattgacttgtgtatgttaagccatcccggcatccctggtatgaaacccacctgatcatggtggattatctttttgatatgcgttggacttggttagctagtattttgttaaggattttagcatctatgttcatcagggatattggtctgtagttttcttttttggttatgtccttttctggttttactattagggtgatactggcatcatagaatgatttaggaagggttgcctctttctctgtcttgtggagtagtgtcaataggattggtaacaa---ttctttgactgtctggcagaattctgctgtgaatctgtctgg-cctggactttttttgttggtaatttttgtgttaccatttcaatcttactgcttgttattgttcagggtatctaattcttcctgatttaagctaggagggttatatctttccagaaatttatccatcgcctctaggtttcctagttgatgtgcataaaggtgttcatagtagccatgaatgatcttttgtagttcagtggtgccagttgtaatatctcccatttcgcttctaattgagcttatttggattttctctcttcttttcttggttaaccttgctaatggtctatcagttttatttatcttttcaaagaaccaggtttttgtttcatttatcttttgtatttttgttgttgttgttgttgttgttgttgttt---caatttcatttagttctgctctgatcttggttatttcctttcttctgctgggtttgggtttggtttgttcttgtttctctaattccttaaggtgtaaccctagattgtcagtttgcgctctttcagattttttatgtaggcatttagggctatg---aactttcctcttatcacagcctttgctgtatcctagaggttttgataggttgtgtcattattgttgttaagattgaataatttttttttttttttttttttttt------gagatggagtttcactcttgttgctcag--------------------------------------------------------------------------------------gctggagtgtagtggcacaatctcagctcactgcaacctccgcctcccaggttcaagtgattctcctgcctcaggatcccgagtagctgggattacaggctt----------ccaccaccacgcccagctaatcttttgtatttttagtagagatggagtttcaccatgttggccagactggtctggaactcctgatctcaggtgatccattggcctcggcctcccaaagtgctaggattacaggcgtgagccaccatatctggccccaaagaattttttaatttccatcttgatttcatttttgacccagtggtcattcaggagcaggttgtttcatttccatgtatttgcatggttttgaaggttccttttggagttgatttccagttttattccactgtggtctgagagagtgcttgatataatttcagttttcttaaatttattgaggctcattttgagacctatcatatggtctatctcagagaaagttccatgtactgttgaatagaatgtgtattctgtggttgttgggtagaatgttctgtaaatatctgttaaatccatttgttctagggtatagttta----cactgtttctttgttgactttctgtcttgatgacctgtctagggctatcagtggagtattgaagtcccccactattgttgtgttgctgtctatctcatttcttagttctattagtaattgttttataaatttaggagctccagggttaggtgcatatttatttaggattgtgatattttcttgtttgacaaggccttttatcat--tataatgaccctctttgtcttttttaaccactgttgctttaaagtttattttgtctgatataagaatagctactcctgcttgctttcggtgtccatttgcatggcatgcctttttctatc------ccttaagtttatgtgagtccttatgtgttagacatgtctcttgaaggcagcagatggttgcttaattcttatccattctgcaattctgtatcttttaagtggagcatttagaccatttacattcaatggtagtattgagatgtgaggtatcattccagtcattgtgctatttgttgcctgtacaccttgagtttttgtgattttgctg--ttttttt-aaattgtatttttgttttataggtcctgtgagatttatgctttaaagaggttgtgtttggatgtgtttccaggatttgtttcaagatttagagctccttttagcagttcttgtagtgctgtcttggtaggggtgaattttctcatcatttgtttgtctaataaagattg-tatctttccttcatttatgaagcttagcttcactggatacaacatttttggctgataattgttttgtttgaggaggctaaaaatagggccccaaacccttctagcttgtagggtttctgctgagaaatctgctgttaatctgataagtttttcctttgtaggttacctggtgtttttgtctcacagctcttacgattcttttcttcatcttaactttaggtaacctgatgacaatgtgcctg------tgcaatgatcttttagcgatgaattctccaggtgttctttgagcctcttgtatttggtgtctaggtctccagcaaagccagggaagttttcctctattattccccaaaataaactttccaaacttttagatttctcttcttcctcaggaacactaattattcctagatttggtcatttgacataatcccagacatcttggag i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 979269 4460 - 2200435 ggtg-ttttcagtagtggttgtactaatttacattcccaccagca-gggtagaagtgttgctcccttttcaccacatccacaccaacatctattatttgttga-ttttttt--attgtggccatccttgccagagtaaggtgctattgcattgcgttttgatttgcattt-cctgatgattagtgatgttgagcattttttcatacgtttgttggccatttgtgtatcttcttttgagaattctctattcatgcccttagccca-tttttgatgcgattgtttggttttccttactgatttgtttgagttcattgtagattctggatattaatcctttgtcagatgtatggattgtgaagattt--------tctgtgaggtgtctgtctgctctgctgactgttccttttgctgtgcacaagctctttagtttaattaagtcccaactatttatctttgtttttattgaatttgcttttgggttcttggtcattaaatccttgcctgagccaatgtctggaagagtttttccaata-----ttctagagtttttatagtttcaggtcttagacttaagtccttgatccatcttgagttgtttctgtataaggtgagagatgaggatctagtttcattct-cctgcacatggcttgccagttatcgcagcatcatttgttgaataggaggtcctttgcccactttttgtttttgtttgcattgttgaagatcaattggctgtaagtatttgggtttatttctgggttctctattctcttccattggtctatgtgcttatttttatacccatactatgctgtttgggtgactatggccttacagtatagtttgaaatcaagttatgtgatgcctccagatttgttctttctgcttgatcttgctttggctatgcaggctctttttgggttccatatgaattttagga-gttttttttctaatttggtgaagaatgatggtggtatttttgatgggaattgtgtcgaattaatagattgcttttggcagtatggttgtttttacaatattgactctacccatccatgagtatgggatgtgtccgagttgtttgtgttgtctgtag-ttttttcagcagtgttttattttgtagttttccttgtagaggtctttcacctccttggttaggtatatttctaagtttttcttttcttttctttcc-------------tttttttctttctttctttcttt-ttttttttt----------tttttttttttttttgcagctattgtagaaggggttgagttcttgatttgattcccagcttgatcgctgttggtgtatagaagacctactg----------------------att------tttgtacattaatcttgtatctggaaac--tgctgtattcttttatcagttctaggagctttctggtagagtcctgagagttttcaaggtaaacaataatatcttcagcaaacagtgacagactgacttcctcttcactgatttggatgcccttaatttcttttgtctgattgctctggctaggacttccagtactatgttgaagaggagtggtgagggtgggtatgcttgtcttgttccagttctcagagggaatgctttaaacttttccctattcagaattatgttggctttgagtttgtcatagacggcttttattacattgaggtatttcccatgtatgcctattttgctgagttttcatcataaaaggatgctggatcttgtcgaatactttttatgcatctattgagacaatcatgtgatttctgtttttgattctgtttacatggtgtatcacatttattgacttgtgtatgttaagccatccctgcatccctggtatgaaacccacctgatcatggtggattatctttttgatatgcgttggacttggttagctagtattttgttaaggattttagcatctatgtttgtcagggatattggtctgtagttttcttttttggttatgtccttttctggttttactgttagggtgatactggcatcatagaatgatttaggaagggttgcctgtttctctgtcttgtggagtagtgtcagtaggattggtaacaa---ttctttgaatgtctggcagaattctgctgtgaatctgtctgg-cctggactttttttgttggtaatttttgtgttaccatttcaatcttactgcttgttattgttcagggtatctaattcttcctgatttaagctaggagggttatatatttccagaaatttatccatctccactaggtttcctagttgatgtgcataaaggtgttcatagtagccatgaatgatcttttgtatttcagtggtgtcagttgtaatatctcccattttgcttctaattgagcttatttgga-tttctctcttcttttcttggttaaccttgctaatggtctatcaattttatttatcttttcaaagaaccaggtttttgtttcatttatcttttgtattt---------------ttgttgttgttgttt---ccatttcatttagttctgctctgatcttggttatttcctttcttctgctgggttcgggtttggtttgttcttgtttctctaattccttaaggtgtaaccctagattgtcggtttgtgctctttcagattttttatgtaggcatttagggctatg---aactttcctcttagcacggcctttgctgtatcctagaggttttgataggttgtgtcattattgttgttcagttcgaaaaa----------aatttttttttttt------gagatggagtttcactcttgttgcccag--------------------------------------------------------------------------------------gctggagtgtagggacacaatctcggctcactgcaacctctgcctcccgggttcaaatgattctcctgcctcaggatccggagtagctgggattacaggcttccaccaccacccaccaccacgcctagctaatcttttgtatttttagtagagatggagtttcaccatgttggccagactggtctggaactcctgatctcaggtgatccactggcctcagcctcccaaagtgctaggattacaggcgtgagccaccgcacctggccccgaagaattttttaatttccatcttgatttcatttttgacccagtggtcattcaggagcaggttgtttcatttccatgtatttgcatggttttgaaggttccttttggagttgatttccagttttattccactgtggtctgagagagtgcttaatataatttcagttttcttaaatttattgaggctcattttgagacctatcatatggtctgtctcagagaaagttccatgtactgttgaatagaatgtgtattctgtggttgttgagtagaatgttctgtaaatatctgttaagtctatttgttctagggtataattta----cactgtttctttgttgactttctatcttgatgacctgtctagggctatcagtggagtattgaagtgccccactatcattgtgttgctgtctatctcatttcttagttctattagtgattgttttataaatttgggagctccagggttaggtgcatatttatttaggattgtgatattttcttgttggacaaggccttttatcat--tataatgacactctttgtcttttttaactactgttgctttaaagtttattttgtctgatataagaatagctactcctgcttgttttcggtgtccatttacatggcatgcctttttctacc------ccttaagtttatgtgagtccttatgtgttaggcatgtctcttgaaggcagcagatggttgcttaattcttatccattctgcaattctgtatcttttaagtggagcatttagaccatttacattcaatggtagtattgagatgtgaggtatcattccagtcattgtgctatttgttgcctgtacaccttgggtttttgtgattttgctg--ttttttt-aaattgtatttttgttttataggtcctgtgagatttatgctttaaagaggttgtgtttggatgtgtttccaggatttgtttcaagatttagagctccttttagcagttcttgtagtgctggcttggtaggggtgaattttctcatcatttgtttgtctaataaagattg-tatctttccttcatttatgaagcttagcttcactggatacaacatttttggctgataattgttttgtttgaggaggctaaagatagggccccaaacccttctagcttgtagggtttctgctgagaaatctgctgttaatctggtaagtttttcctttgtaggttacctggtgtttttgactcacagctcttaagattcttttcttcatcttaactttaggtaacctgatgacagtgtacctg------ggcaatgatcttttagcgatgaattctccaggtgttctttgagcctcttgtatttggtgtctaggtcttcagcaaagccagggaagttttcctctattattccccaaaataaactttccaaacttttagatttctcttcttcctcaggagcactaattattcctagatttggtcatttgacataatcccagacatcttggag i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1408880 4483 - 13651311 ggtg-ttttcaacagtggttgtactaatttacgttcccaccggca-gggtagaagtgttgctcccttttcaccacatccacaccaacatctattatttgttga-ttttttt--attgcggccatccttgccagagtaaggtgccattgcattgcgttttgatttgcattt-cctgatgattagtgatgctgagcattttttcatacgtttgttggccatttgtgtatcttcttttgagaattctctattcatgcccttagcccattttttgatgcgattgtttggttttccttactgatttgtttgagttcgttgtagattctggatattaatcctttgccagatgtatggattgtgaagattttctcccactctgtgaggtgtctgtttactctgctgactgttccttttgctgtgcacaagctctttagtttagttaagtcccaactatttatctttgtttttattgaatttgcttttgggttcttggtcattaaatccttgcctgaacc-atgtctagaagagtttttccaatgttatcttatagagtttttatagtttcaggtcttagacttaagtccttgatccatcttgagttgtttctgtataaggtgagagatgaggatctagtttcattct-cctacacatgacttgccagttatcgcagcatcatttgttgaataggaggtcctttgcccactttttgtttttgtttgcattgttgaagatcaattggctgtacgtatttgggtttatttctgggttctctattctcttccattggtctatgtacttatttttatacccata-tatgctgttttggtgactatgaccttacagtatagtttgaaatcaagtaatgtgatgcctccagatttgttctttctgcttgatcttgctttggctatgcaggctctttttgtgttccatatgaattttagga--ttttttttctaatttggtgaagagtgatggtggta-ttttgatgggaattgtgtcgaattaatagattgcttttggcagtatggttgtttttacaatactgactctacccgtccgtgagtatgggatgtgtccgatttgtttgtgttgtctgtagtttttttcagcagtgttttattttgtagttttccttgtagaggtctttcacctccttggttaggtatatttctaagtatttcttttcttttctttcctttttttctttctttctttcttttttttcttttct--tttcttttc------tttttttttttttttttttgcagctattgtaaaaggggttgagttcttgatttgattctccacttggttgctgttggtgtatagaagagctactg----------------------att------tgtatacattaatcttgtatccagaaactttgctgaaatcttttatcagttctaggagctttctggtagagtccttagagttttcaaggtaaacgataatatcttcagcaaacagtgacagactgacttcctcttcgctgatttggatgccctttatttcttttgtctgattgctctggctaggacttccagtactacgttgaagaggagtggtgagggtgggcatccttgtcttgttccacttctcagagggaatgctttacatttttccccattcagaattatgttggctgtgagtttgtcatagatggcttttattacattgaagtatttcccttgtatgcctattttgctgagttttcatcataaagggatgctggatcttgtcgaatactttttatgcatctattgagacgatcatgtgatttctgcttttcattctgtttacgtgatgtatcacatttattgacttgtgtattttaagccatccctgcatccctggtatgaaacccacctgatcatggtggattatctttttgatatgcattggacttggttagctaatattttgttaaggattttagcatctatgttcgtcagggatattggtctgtagttttctttttcagttatgtccttttctggttttactattagggtgacactggcatcatagaatgatttaggaagggttgcctgtttctctgtcttgtggagtagtgtcaataggattggtaacaattcttctttgaatgtctggcagaattctgctgtgaatttgtctgt-cctggacttcttttgttggtaatttttgtgttaccatttcaatcttactgcttgttattgttcagggtatctaattcttcctgatttaagctaggggggttatatctttccagaaatttatccatcacctctaggtttcctagttgatgtgcataaaggtgttcatagtagccatgaatgatcttttgtatttaagtggtgtcagttgtaatatctcccatttcccttctaattgagcttatttggattttctctcttcttttcttggttaaccttgttaatggtctatcaattttatttatcttttcaaagaaccaggtttttatttcatttatcttttgtattt---------------ttgttgttgctgttt---caatttcatttagttctgctctgatcttggttatttcctttcttctgctgggttcgggtttggtttgttcttgtttctctaattccttaaggtgtaaccctagattgtcagtttgtgctctttcagattttttatgtaggcatttagggctatg---aactttcctcttagcacggcctttgctgtatcctggaggttttgataggttgtgtcattatcgttattcagtttgaataa---------ttttttttttttttt------gagatggagtttcactcttgttgcccag--------------------------------------------------------------------------------------gctggagtgtagtggcacaatctcagctcactgcaacctccacctcccgggttcaagtgattctcctgcctcaggatcccaagtagctgggattacaggctt----------ccaccaccacgcccagctaatcttttgtatttttagtagagatggagtttcaccaagttggccagactggtctggaactcctgatctcgggtgatccactggcctcggcctcccaaagtgctaggattacaggcatgagccac--cacctggccccaaagaattttttaatttccatcttgatttcatttttgacccagtggtcattcaggagcaggttgtttcatttccatgtatttgcatggttttgaaggttccttttggagttgatttccagttttattccactgtggtctgagagagtgcttgatataatttcaattttcttaaatttattgaggctcattttgagacctatcatatggtctatctcagagaaagttccatgtactgttgaatagaatgtgtattctgtggttgttgggtagaatgttctgtaaatatctgttaagtccatttgttctagggtatagttta----cactctttctttgttgactttctgtcttgatgacctgtctagggctatcagtggagtattgaagtcccccactattattatgttgctgtctatctcatttcttagttctattagtaattgttttataaatttgggagctccagggttaggtgcatatttatttaggattgtgatattttcttgttagacaaggcctcttatcat--tataatgaccctctttgtcttttttaaccactgttgctttaaagtttattttgtctgacataagaatagctactcctgcttgctttcggtgtctatttgcatggcatgcctttttctacc------ccttaagtttatgtgagtccttatgtgttaggcatgtctcttgaaggcagcagatggttgcttaattcttatccattctgcaattctgtatcttttaagtggagcatttagaccatttacattcaatggtagtattgagatgtgaggtatcattccagtcattgtgctgtttgttgcctgtacaccttgggtttttgtgattttgctg--tttttttaaaattgtatttttgttttataggtcctgtgagatttatgctttaaagaggttgtgtttggatgtgtttccaggatttttttcaagattcagagctccttttagcagttcttgtagtgctgcctcggtaggggtgaattttctcatcatttgtttgtctaataaagattg-tatctttccttcatttatgaagcttagcttcactggatacaacatttttggctgataattgttttgtttgagggggctaaagatagggtcccaaacccttctagcttgtagggtttctgctgagaaatctgctgttaatctggtaagtttttcctttgtaggttacctggtgtttttgtttcacagctcttaagattcttttcttcatcttaactttaggtaacctgatgacaatgtgcctg------ggcaatgatcttttagtgatgaattctccaggtgttctttgagcctcttgtatttggtgtctaggtctccagcaaagccagggaagttttcctctattattccccaaaataaactttccaaacttttagatttctcttcttcctcaggaacactaattattcctggatttggtcatttgacatgatctcagacatcttggag i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 140943 17295 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1245710 474 - 7082604 I e cebCap1.NW_016107827v1 1331019 8767 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1748953 1025 + 4416731 I e calJac3.chr14 1407450 9043 - 108792865 I a score=36480.000000 s hg38.chr2_KI270774v1_alt 150918 6 + 223625 gctatc s panTro5.chr2A 1437862 6 + 111504155 actatc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1386918 6 + 114371477 gctatc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1410961 6 + 1464242 gctatc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1133876 6 + 81552678 gctttc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1463316 6 + 108979918 gctttc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1435757 6 - 111193037 gctttc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1463744 6 + 3644372 gctttc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1418151 6 - 10304083 gctttc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1495218 6 - 107702431 gctttc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 983729 6 - 2200435 gctttc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1413363 6 - 13651311 gctttc i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1416493 6 - 108792865 gctttg i calJac3.chr14 I 9043 C 0 s saiBol1.JH378218 1246184 6 - 7082604 gctttg i saiBol1.JH378218 I 474 C 0 e aotNan1.NW_018513311v1 140943 17295 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1331019 8767 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1748953 1025 + 4416731 I a score=1102181.000000 s hg38.chr2_KI270774v1_alt 150924 118 + 223625 ttcatattttcttattcttttttctttgtctttgttggattgggttaatctgaagaccttgtctttgagctctgaagtt--ttcttttgcttgtttgattctattgctgagactttccag s panTro5.chr2A 1437868 120 + 111504155 ttcatattttcttattcttttttctttgtctttgttggattgggttaatctgaagaccttgtctttgagctctgaagttctttcttttgcttgtttgattctattgctgagatcttccag i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1386924 120 + 114371477 ttcatattttcttattcttttttctttgtctttgttggattgggttaatctgaagaccttgtctttgagctctgaagttctttcttttgcttgtttgattctattgctgagatcttccag i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1410967 120 + 1464242 ttcatattttcttattcttttttctttgtctttgttggattgggttaatctgaagaccttgtctttgagctctgaagttctttcatttgcttgtttgattgtattgctgagactttccag i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1133882 120 + 81552678 ttcatattttcttattcttttttctttgtctttgttggattgggttaatctgaagaccttgtctttgagctctgaagttctttcttttgcttgtttgattctattgctgagactttccag i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1463322 116 + 108979918 ttcgtattttattattc----ttctttgtctttgttggattgggttaatctgaagaccttgtctttgagctctgaagttcttttttctgcttgtttgattctattgctgagagtttccag i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1435763 116 - 111193037 ttcgtattttattattc----ttctttgtctttgtttgattgggttaatctgaagaccttgtctttgagctctgaagttctttcttctgcttgtttgattctattgctgagagtttccag i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1463750 116 + 3644372 ttcgtattttattattc----ttctttgtctttgttggattgggttaatctgaagaccttgtctttgagctctgaagttctttcttctgcttgtttgattctattgctgagagtttccag i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1418157 119 - 10304083 ttcatattttattattc-tttttctttgtctttgttggattgggttaatccgaagaccttgtctttgagctctgaagttctttcttctgcttgtttgattctattgctgagagtttccag i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1495224 119 - 107702431 ttcatattttattattc-tttttctttgtctttgttggattgggttaatctgaagaccttgtctttgagctctgaagttctttcttctgcttgtttgattctattgctgagagtttccag i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 983735 119 - 2200435 ttcatattttattattc-tttttctttgtctttgttggattgggttaatctgaagaccttgtctttgagctctgaagttctttcttctgcttgtttgattctattgctaagagtttccag i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1413369 113 - 13651311 ttcgtattttatta-------ttctttgtctttgttggattgggttaatctgaagaccttgtctttgagctctgaagttctttcttctgcttgtttgattctattgctgagagtttccag i colAng1.NW_012118821v1 C 0 M 780 s calJac3.chr14 1416499 119 - 108792865 ttcatattttcttactt-tttttctctgcttttgttggattgggttaattcaaaaaccttgtcttcaagctctgaagttctttcttctggttgttcaattctattgctgagactttccag i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1246190 119 - 7082604 ttcatattttcttactt-ttttcctctgtttttgttggattggtttaattcaaaaacctggtcttcaagctctgaagttctttcttctggttgttcaattctattgctgagactttccag i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1339786 119 + 1864846 ttcatattttcttactt-tttttctctgtttttgttgtattgggttaattcaaaaaccttgtcttcaagctctgaggttctttcttctggttgttcaattctattgctgagactttccag i cebCap1.NW_016107827v1 I 8767 C 0 s aotNan1.NW_018513311v1 158238 119 + 287728 ttcatgttttcttactt-tttttctctgtttttgttggattgggttaattcaaataacttatcttcaagctctgaagttctttcttctggttgttcaattctgttgctgagactttccag i aotNan1.NW_018513311v1 I 17295 C 0 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1748953 1025 + 4416731 I a score=7232505.000000 s hg38.chr2_KI270774v1_alt 151042 909 + 223625 tacattttgaatttctctgagtgtgtccaatgtttcctgaagttttga-t-tgttttttatttgtgatatctatttcc-ttgaatatttctcccttcacttcttgtatcatttttctgatttccttacattgggctttgcctttctctggtgccttcctgattagcttaataattaaccttctgaattctttttcaggtaaatcagggatttctccttggtttggatccattgccagtgagctagtgtgattttagggggtgttaaagagccttattttgttatattaccagagttggttttctggttccttctcatttgggtagtctctgtcagagggaaggtctagggctctagcctgttgttcagattctttcgccccagggggt---------gttccctggacgtgattagtactctccctgtttcctagggatgtggcttcctgagagctaaggtgtagttattgttatctctcttctggatctagccaccaagttcaaattgttacaaagtt-cagctggcagtttccttctccctgtggccttttacaggtgcctctggcagccctcctgaaggacccctgtgaggcaaggtggaaatggcttcctaggggacccagagatcccacagggcttttctggctgcttcctctactcttgtattcc------------------actcggctctctaaatggactcagctccgggtaaagtcagaatcttctcccgtaatctagaccttcaggttccgcagtgggggtgcatgttc-agggtggacgatctctcccacttcctcagtttgggcactcacagtatttggggtgtctcccgagtcctgcaggagccatccgctttcttcagagggtctgcggtttctcttggctttcctaatgtattcctgccgtcgttctggagcaaaagttcacga s panTro5.chr2A 1437988 909 + 111504155 tacattttgaatttctctgagtgtgtccaatgtttcctgaagttttga-t-tgttttttatttgtgatatctatttcc-ttgaatatttctcccttcacttcttgtatcatttttctgatttccttacattgggctttgcctttctctggtgccttcctgattagcttaataattaaccttctgaattctttttcaggtaaatcagggatttctccttggtttggatccattgccagtgagctagtgtgattttagggggtgttaaagagccttattttgttatattaccagagttggttttctggttccttttcatttgggtagtctctgtcagagggaaggtctagggctcaagcctgttgttcagattctttcgccccacggggt---------gttcgctggacgtgattagtactctccctgtttcctagggatgtggcttcctgagagctaaggtgtagttattgttatctctcttctggatctagccaccaagttcaaattgttacaaagtt-cagctggcggtttccttctccctgtggcctttcacagatgcctctggcagccctcctgaaggacccctgtgaggcaaggtggaaatggcttcctaggggacccagagagcccacagggcttttccggctgcttcctctactcttttattcc------------------actcggctctctaaatggactcagctccgggtaaagtcagaatcttctcccgtaatctagaccttcaggttccgcagtgggggtgcatgttc-agggtggacgatctctcccacttcctcagtttgggcactcacagtatttggggtgtctcccgagtcctgcaggagccatccgcttccttcagagggtctgcaggttctcttggctttcctaatgtattcctgctgtcattctggagcaaaagttcacga i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1387044 909 + 114371477 tacattttgaatttctctgagtgtgtccaatgtttcctgaagttttga-t-tgttttttatttgtgatatctatttcc-ttgaatatttctcccttcacttcttgtatcatttttctgatttccttacattgggctttgcctttctctggtgccttcctgattagcttaataattaaccttctgaattctttttcaggtaaatcagggatttctccttggtttggatccattgccagtgagctagtgtgattttagggggtgttaaagagccttattttgttatattaccagagttggttttctggttccttttcatttgggtagtctctgtcagagggaaggtctagggctcaagcctgttgttcagattctttcgccccacggggt---------gttccctggacgtgattagtactctccctgtttcctagggatgtggcttcctgagagctaaggtgtagttattgttatctctcttctggatctagccaccaagttcaaattgttacaaagtt-cagctggcggtttccttctccctgtggcctttcacagatgcctctggcagccctcctgaaggacccctgtgaggcaaggtggaaatggcttcctaggggacccagagagcccacagggcttttccggctgcttcctctactcttttattcc------------------actcggctctctaaatggactcagctccgggtaaagtcagaatcttctcccgtaatctagaccttcaggttccgcagtgggggtgcatgttc-agggtggacgatctctcccacttcctcagtttgggcactcacagtatttggggtgtctcccgagtcctgcaggagccatccgcttccttcagagggtctgcaggttctcttggctttcctaatgtattcctgctgtcattctggagcaaaagttcacga i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1411087 909 + 1464242 tacattttgaatttctctgagtgtgtccaatgtttcctgaagttttga-t-tgttttttatttgtgatatctatttcc-ttgaatatttctcccttcacttcttgtatcatttttctgatttccttacattgggctttgcctttctctggtgccttcctgattagcttaataattaaccttctgaattctttttcaggtaaatcagggatttctccttggtttggatccattgccagtgagctagtgtgattttagggggtgttaaagagccttattttgttatattaccagagttggttttctggttccttctcatttgggtagtctctgtcagagggaaggtctagggctcaagcctgttgttcagattcttttgctccatggggt---------gttccctggacgtgattagtactctccctgtttcctagggatgtggcttcctgagagctaaggtgtagttattgttatctctcttctggatctagccaccaagttcaaattgttacaaagtt-cagctggcggtttccttctccctgtggccttttacaggtgcctctggcagccctcctgaaggacccctgtgaggcaaggtggaaatggcttcctaggggacccagagagcccacagggcttttccggctgcttcctctactcttgtattcc------------------actcggctctctaaatggactcagctccgggtaaagtcagaatcttctcccgtaatctagaccttcaggttccgcagtgggggtgcatgttc-agggtggacgatctctcccagttccgcagtttgggcactcacagtatttggggtgtctcccgagtcctgcaggagccatccgcttccttcagagggtctgcgggttctcttggctttcctaatgtattcctgccgtcgttctggagcaaaagttcacga i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1134002 909 + 81552678 tacattttgaatttctctaagtgtgtccaatgtttcctgaagttttga-t-tgttttttatttgtgatatctatttcc-ttgaatatttctcccttcacttcttgtatcatttttctgatttccttacattgggctttgtctttctctggtgccttcctgattagcttaataactaaccttctgaattctttttcaggtaaatcagggatttctccttggtttggatccattgccagtgagctagtgtgattttggggggtgttaaagagccttgttttgttatattatcagagctggatttctggttccttctcatttggatagtctctgtcagagggaaggtctagggctcaaggctgttgttcagattctttcatcccacggggt---------gttccctggatgtgattcgtactctccatgtttcctagggatgtggcttcctgagagctaaggtatagtgatcgttatctctcttctggatctagccaccaagttcaaattgttacaaagtt-cagctggaggtttccttctccctgtggcctttttcaggtgcctctggcagccctcctgaagcacccctgtgaggcgaggtgaaaatggcttcctaggggacccagagagcccacagggcttttccagctgcttcctctactcctgtattcc------------------actcggctctctaaattgactcagccccgggtaaagtcagaatcttcttccgtaatctagaccttcaggttccgcagtgggggtgcatgttc-ggggtggaccatctctcccacttccgcagtttgggcactcacagtatttggggtgtctcccgagtcctgtaggagccatccgcatccttcagagggtctgcgggttctcttggctttcctaatgtattcctgccgtcgttctggagcaaaagttcacga i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1463438 900 + 108979918 agcagtttgaatttctctaagtgtgtccaatgttgcctgaagttttga-t-t-ttttttatttatgatatctatttcc-tggaatatttcttccttcacttcttgtatcatttttccgatttccttacattgggctttgcgttactctggtgccttcctgattagcttagtaactaatcttctaaattttttttca-gtaaatcagagatagcttc----tttggatccattgctggtgagctagtatgattttggggagtgttaaagagccttgttttgtcatattaccagagttggttttctggttccttcaaatttggatagtctctgtcagagggaaggtctagggctcaaggctgttgttcagcttctttcgtccctcggagt---------gttccctggatgtaattagtgcacttcctgtttcctagggaggtggtttcctgagagccaaggtgtagcgattgttacctctcttctggatctagccacccagtgcaaattgttacaaagtt-c-gctggaggtttccttcttcctgtggcctttttcaggtgcctctggcagccctcctga--gatccctgtgaggcagggtggaagtggctacctaggggacttggagagctcacagggctttttccactgcctcctctacccctgtattcc------------------cctcggctctctaaattgactcagctccaggtgaagtcagaatcttctcccataatctagaccttccggttccccattgggggtgcgtgttc-agggtgggtgatctctcccacttctgcagtttgggcattcacagtatttggggtgtctcctgagtcctgcaggagccatccgcttcctttagagggtttgtgggttctcttggctttcctaatgtattcctgccgtcattctggagccaaagttcacga i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1435879 903 - 111193037 agcagtttgaatttctctaagtgtgtccaatgttgcctgaagttttgatt-t-ttttttatttatgatatctatttcc-tggaatatttcttccttcacttcttgtatcatttttccgatttccttacattgggctttgcgttactctggtgccttcctgattagcttagtaactaatcttctaaattttttttca-gtaaatcagagataccttc----tttggatccattgctggtgagctagtatgattttggggagtgttaaagagccttgttttgtcatattaccagagttggttttctggttccttcaaatttggatagtctctgtcagagggaaggtctagggctcaaggctgttgttcagcttctttcgtccctcggagt---------gttccctggatgtaattagtgcacttcctgtttcctagggaggtggtttcctgagagccaaggtgtagcgattgttacctctcttctggatctagccacccagtgcaaattgttacaaagtt-c-gctggaggtttccttcttcctgtggcctttttcaggtgcctctggcagccgtcctgaaggatccctgtgaggcaaggtggaagtggctacctaggggacttggagagctcacagggcttttcccactgcctcctctacccctgtattcc------------------cctcggctctctaaattgactcagctccaggtgaagtcagaatcttctcccgtaatctagaccttccggttccccattgggggtgcgtgttc-agggtgggtgatctctcccacttctgcagtttgggcattcacagtatttggggtgtctcctgagtcctgcaggagccatccgcttcctttagagggtttgtgggttctcttggctttcctaatgtattcctgccgtcattctggagcaaaagttcacga i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1463866 903 + 3644372 agcagtttgaatttctctaagtgtgtccaatgttgcctgaagttttga-t-t-ttttttatttatgatatctatttcc-tggaatatttcttccttcacttcttgtatcatttttccgatttccttacattgggctttgcgttactctggtgccttcctgattagcttagtaactaatcttctaaattttttttcaggtaaatcagagataccttc----tttggatccattgctggtgagctagtatgattttgggaagtgttaaagagccttgttttgtcatattaccagagttggttttctggttccttcaaatttggatagtctctgtcagagggaaggtcgagggctcaaggctgttgttcagcttctttcgtccctcggagt---------gttccctggatgtaattagtgcacttcctgtttcctagggaggtcgtttcctgagagccaaggtgtagcgattgttacctctcttctggatctagccacccagttcaaattgttacaaagtt-c-gctggaggtttccttcttcctgtggcctttttcaggtgcctctggcagccctcctgaaggatccctgtgaggcagggtggaagtggctacctaggggacttggagagctcacagggcttttcccactgcctcctctacccctgtattcc------------------cctcggctctctaaattgactcagctccaggtgaagtcagaatcttctcccgtaatctagacctcccggttccccattgggggtgcgtgttc-agggtgggtgatctctcccacttctgcagtttgggcattcacagtatttggggtgtctcctgagtcctgcaggagccatccgcttcctttagagggtttgtgggttctcttggctttcctaatgtattcctgctgtcattctggagcaaaagttcacga i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1418276 904 - 10304083 agcagtttgaatttctctaagtgtgtccagtgttgcctgaagttttga-t-t-ttttttatttatgatatctatttcc-tggaatatttcttccttcacttcttgtatcatttttccgatttccttacattgggctttgcgttactctggtgccttcctgattagcttagtaactaaccttctaaattttttttcaggtaaatcagagataccttc----tttggctccattgctggtgagctagtatgattttggggagtgttaaagagccttgttttgtcatattaccagagttggttttctggttccttcaaatttggatagtctctgtcagagggaaggcctagggctcaaggctgttgttcagcttctttcgtccctcggagt---------gttccctggatgtaattagtgcacttcctgtttcctagggaggtggcttcctgagagccaaggtgtagcgattgttgtctctcttctggatctagccacccagttcaaattgttacaaagtt-cagctggaggtttccttcttcctgtggcctttttcaggtgactctggcagccctcctgaaggatccctgtgaggcaaggtggaagtggctaccgaggggacttggagagcccacagggcttttccagctgcttcctctacccctgtattcc------------------cctcggctctctaaattgactcagctctgggtaaagtcagaatcttctcccgtaatctagaccttccggttccccattgggggtgcgtgttc-agggtgggtgatctctcccacttctgcagtttgggcactcacagtatttggggtgtctcccgagtcctgcagaagccatccacttccttcagagggtttgtgggttctcttggctttcctaatgtattcctgccgtcattctggagcaaacgttcatga i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1495343 904 - 107702431 agcagtttgaatttctctaagtgtgtccaatgttgcctgaagttttga-t-t-ttttttatttatgatatctatttcc-tggaatatttcttccttcacttcttgtatcatttttccgatttccttacattgggctttgcgttactctggtgccttcctgattagcttagtaactaactttctgaattttttttcaggtaaatcagagataccttc----tttggatccattgctggtgagctagtgtgattttggggagtgttaaagagccttgttttgtcatattaccagagttggttttctggttccttcaaatttggatagtctctgtcagagggaaggtctagggctcaaggctgttgttcagcatctttcgtccctcggagt---------gttccctggatgtaattagtacactccctgtttcctagggaggtggcttcctgagagccaaggtgtagtgattgttatctctcttctggatctagccacccagttcaaattgttacaaagttca-gctggaggtttccttcttcctgtggcctttttcaggtgcccctggcaaccttcctgaaggacccctgtgaggcaaggtggaagtggctacctaggggactcagagagcccacagggcttttcccgctgcctcctctacccctgtattcc------------------actcggctctctaaattgactcagctccgggtaaagtcagaatcttctcccgtaatctagaccttccggttccccattgggggtgcgtgttc-agggtgggtgatctctcccacttctgcagtttgggcactcacagtatttggggtgtctcccgagtgctgcaggagccatccgcttccttcagagggtttgtgggttctcttggctttcctgatgtattcctgccgtcattctggagcaaacgttcacga i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 983854 895 - 2200435 agcagtttgaatttctctaagtgtgtccaatgttgcctgaagttttga-t-t-tttttaatttatgatatctatttcc-tggaatatttcttccttcacttcttgtatcatttttccgatttccttacattgggctttgcgttactctggtgccttcctgattagcttagtaactaaccttctgaagtttttttcaggtaaatcagagatgccttc----tttggatccgttgctg--------gtgtgattttggggagtgttaaagagccttgttttgtcatattatcagagttggttttctggttccttcaaatttggatagtctctgtcagagggaaggtctagggctcaaggctgttgttcagcttctttcgtccctcggagt---------gttccctggatgtaattagtgcacttcctgtttcctagggaggtggcttcctgagagccaaggtgtagcgattgttgtctctcttctggatctagccacccagttcaaattgttacaaagtt-a-gctggaggtttccttcttcctgtggcctttttcaggtgcctctggcagccctcctgaaggacccctgtgaggcaaggtggaagtggctacctaggggactcggagagcccacagggcttttccagctgcttcctctacccctgtattcc------------------cctcggttctctaaattgactcagctctgggtaaagtcagaatcttctcccgtaatctagaccttccggttccccattgggggtgcgtgttc-agggtgggcgatctctcccacttctgcagtttgggcactcacagtatttggggtgtctcccaagtcctgcaggagccatccacttccttcagagggtttgtgggttctcttggctttcctaatgtattcctgctgtcattctggagcaaacgttcacga i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1416618 899 - 108792865 agcattttgtatttctgtaagtgcatccaatatttcctgaagttttga-tgt-ttttttattcatgatatctatttcatttgaatatttctcccttcacttcttgtatcatttttctgatttccttatatggggtgttgcctttctctggtgccttcctgatcagcttaataactaaccttctgaattcttcttcagataaatcagggatttcttc----tttggatccattgct-gtgagctagtgtgattttggagggtgttaaagaaccttgttttgtcacattaccagagttggctttctggttccttctcattcgggtaggctctgtgagagggaagattcag---------ctgttgttcagattctggtgtcccacagggtcaccagcagggttccttgatgtagttaggactgtccctatttcccagggatgtggcttcccaagagccaaggtgtactgattgttatctcgcttctgaatctagccacccagttc-aattgttaaacagtt-cagctggaggtttccttctccccgtggtcttttcccggtgcctctggcagccctcctcaaggacccctgtgaggcaaggtggaaatggcttgctaggggacccagtgagctcaggggacttttcccgctgcttcctctatccctgtacttc------------------gctcaactctctaacttgactcagctccaggaaaggtcagaatctt---ctgtcgtctagaccttcaggctccccagttgaggtgcgtgtttgggggtggacag--tctgtcacttccacagtctgggcactcacagtatttggggtatctcccaggtcctgcgggagccatccgcttccttcagagggtctgtgggttctcttggctttgccaatgtgttcctgc-gtcattctggagcaagagttcatgc i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1246309 892 - 7082604 agcattttgcatttctgtaagtgtgtccagtatttcctgaagttgtga-t-t-ttttttatgcttgatatctatttca-ttggatatttctcccttcacttcttttatcgtttttctgatttctttacatggggctttgcctttctttggtgccttcctgattagcttaataactaaccttctgaa---ttcttcaggtaaggcagggatttcttc----tttggatccgttgctggtgagctagtgtgattttggagggtggtaaagaacgttgttttgtcatgttaccagagttggctttctggttccttcccattcgggtaggctctgtgagagggaagatttgg---------cggttgttcagattctgttgtcccacagggt---------gtttccttgatgtagttagtactacccctatttcctagggatgtggcttcccgagagccaacgtgtagtgattgttatctctcttctgaatatagccacccagttc-aattgttaaacagtt-cagctggagctttccttctccctgtggccttttcctggtgcctctggcagccctcctcaaggacccctgtgaggcaaggtgaaaatggcttgctaggggacccggcgagcccaggggacttctcccgctgcttcctctacccctgtatttc------------------actcagctctctaacttgactcagctccaggtaaggtcagaatcttctcctgtaatctagaccttcagtttccccagttggggtgcatgttttggggtggacagtctctgccacctccatggtttgggcactcacagtatttggggtatctcccagatcctgcaggagtcatccgcttcctgcagagggtctgtgcgtcctcttggctttcctaatgtgttcctgcagtcgttctggagtgagagttcgtga i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1339905 895 + 1864846 agcattttgcatttctataagtgtgtcgaatatttccagaagttctga-tgt-ttttttattcttgatatctatttca-ttgaatatttctcccttcaattcttttatcatttttctgacttccttacatggggctttgcctttctctggtgccttcctgattagcttaacaactaaccttctgaattcttcttcaggtaaatcagggatttcttc----tttggatccattgctggtgagctagtgtgattttggagggtgttaaagaaacttgttttgtcatattcccagagttggctttctggttccttctcatttaggtaggctctgtgagagagaagatttgg---------ctgttgttcagattctgttgtcccatagggt---------gtttccttgatgtagttagtactacccctatttcctagggatgtggcttcccgagagccaaggtgtggtgattgttatctctcttcagaatctagccacctagttc-aattgttaaacagtt-cagctggaaacctccttctccctgtggccttttcctggtgcctctggcagccctccg-aaggacccctgtgaggcgaggtggaaatggcttgctaggggacctggcgagcccagggcacttctcccactgcttcttctacccctgtatttc------------------attcagctctctgacttgactcagctccaggtaaggtcaggatcttctcctgtaatctagactttcaggttccccagttggggtgcatgtttgggggtggacaatctctgccacttccacagtttgggcactcacagtatttggggtatctcccaggtcctgcaggagccatctgcttccttcagagggtctatgggttctcttggctttcctaatgtgttcctgcagtcattccagagcgagagttcatga i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 158357 912 + 287728 agccttttgcatttctataagtgtgtccaatatttcctgaagttgtga-tgt-tttttcattcttgatatctatttca-ttgaatatttctcccttcacttcttttgtcatttttctgatttccttacatggggctttgcctttctctggtgccttcctgattagcttaataactaaccttctgaattcttcttcaggtaaatcagggatttcttc----tttggacccattgctggtgagctagtgtaattttggagggcgttaaagaaccttgttttgtcgtattaccagagttggctttctggttccttctcatttgggtaggctcagtgagagggaagatgtgg---------ctgttgcccagattctgctgtcccaca-ggt---------gtttccttgaggtagttggtactacccctgtgtcctaggggcgtggcttcccgagagccaaggtgtggtgattgttacctctcttctgaatctagctgcccaggtc-aattgttaaacagtt-cagctggagccatccttctccctgtggccttttcctggtgcctctggcagccctcctcaaggacccctgtgaggcaaggtggaaatggcttgctaggggacccggcgagcccaggg-acttctcccgctgcttcctccacccctgcatttcactcagctctctaactcgactcagctctctaactcgactcagctccaggtaagggcagaatcttctcctgtaatctagaccttcaggttccccagctggggtgcatgtttgggggtggacaatctctgccacttccacagtttgggcactcacagtatttggggtgtctcccaggtcctgcaggagccatccgcttccttcagagagtctgtgggttctctcgcctttcctaatgtgttcctgcagtcgttctggagcgcgagttcgtga i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1748953 1025 + 4416731 I e colAng1.NW_012118821v1 1413482 780 - 13651311 M a score=867204.000000 s hg38.chr2_KI270774v1_alt 151951 94 + 223625 cgtgaacctccacacactgctctgtttgtccaagtgagagctgaaacctagtcctgcctcttgtccgccatgatccGTCAC-AAAAAATCCTCCT s panTro5.chr2A 1438897 94 + 111504155 tgtgaacctccacacactgctctgtttgtccaagtgagagctgaaatctagtcctgcctcttgtccgccatgatccGTCAC-AGAAAATCCTCCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1387953 94 + 114371477 tgtgaacctccacacactgctctgtttgtccaagtgagagctgaaatctagtcctgcctcttgtccgccatgatccGTCAC-AAAAAATCCTCCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1411996 94 + 1464242 cgtgaacctccacacactgctctgtttgtccaagtgagagctgaaatctagtcctgcctcttgtctgccataatccGTCAC-AAAAAATCCTCCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1134911 94 + 81552678 cgtgagcctccacacactgctctgtttgtccgagtgagagctgaaatctagtcctgcctcttgtccgccaggatccGTCAC-AAAAAATCCTCCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1464338 94 + 108979918 catgagcttccacacaccgctctgtttgtctgagtgagagctgaaatctagtcctacctcttgtcctccatgatcTGTCAC-AAAAAATCCTCCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1436782 94 - 111193037 catgagcttccacacaccgctctgtttgtctgagtgagagctgaaatctagtcctacctcttgtcctccatgatcTGTCAC-AAAAAATCCTCCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1464769 94 + 3644372 catgagcttctacacaccgctctgtttgtctgagtgagagctgaaatctagtcctacctcttgtcctccatgatcTGTCAC-AAAAAATCCTCCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1419180 95 - 10304083 cgtgagcttccacacaccgctctgtttgtctgagtgagagctgaaatctagtcctacctcttgtcctccatcatcTGTCACAAAAAAATCCTCCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1496247 93 - 107702431 cgtgagcttccacacactgctctgtttgtctgagtgagagctgaaatctagtcctacctcctgtcctccat-gTCTGTCAC-AAAAAATCCTCCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 984749 94 - 2200435 cgtgagcttccacacaccgctctgtttgtctgagtgagagctgaaatctagtcctacctcttgtcctccatcatcTGTCAC-AAAAAATCCTCCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1414263 94 - 13651311 CgtgagcttccacacaccgctctgtttgtctgagtgagagctgaaatctagtcctacctcttgtcctccatGATCTGTCAC-AAAAAATCCTCCT i colAng1.NW_012118821v1 M 780 C 0 s calJac3.chr14 1417517 94 - 108792865 tgtgaacctccacatgccgctctgtttgtctgagtgggagctgcagtctagtcctccctcttgtctgccgtgatccATCAC-AAAAAAGCCTCCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1247201 95 - 7082604 tgtgaacctccacatgctgctctgtttgcctgagtgggagctgcagtctagcccttcctcttgtctgccgtgatccATCACAAAAAAAGCCTCCT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1340800 94 + 1864846 tgtgaacctccacacgctgctctgtttgtctgagtgggagctgcggtctggtcctccctcttgtctgctgtgatcTGTCAC-AAAAAAGCCTCTT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 159269 93 + 287728 cgtgaacctccacaggctgctctgtttgtctgagtgggagct-cagtctagccctccctctcgtctgccatgatccATCAC-AAAAAAGCCTCCT i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1748953 1025 + 4416731 I a score=1737814.000000 s hg38.chr2_KI270774v1_alt 152045 190 + 223625 CATGTTGGAATTTTAATAGGTACTCCCAAATTTCTCTGCAGCAATGAGATGGCGAATTGTATTTTCTAATTGATTATTTTTCAGCAACAATTAATCTTACATAATTCCTATTA-TTTTCCAATGCGGTAAAGAAGAA-----AATCTTGAATTTTACATTATTGGCT------TTAAAACCTGTATCTGTGTCTC-TTTtgtt s panTro5.chr2A 1438991 190 + 111504155 CATGTTGGAATTTTAATAGGTACTCCCAAATTTCTCTGCAGCAATGAGATGGCGAATTGTATTTTCTAATTGATTATTTCTCAGCAACAATTAATCTTACATAATTCCTATTA-TTTTCCAATGCGGTAAAGAAGAA-----AATCTTGAATTTTACATTATTGGCT------TTAAAACCTGTATCTGTGTCTC-TTTtgtt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1388047 190 + 114371477 CATGTTGGAATTTTAATAGGTACTCCCAAATTTCTCTGCAGCAATGAGATGGCGAATTGTATTTTCTAATTGATTATTTCTCAGCAACAATTAATCTTACATAATTCCTATTA-TTTTCCAATGCGGTAAAGAAGAA-----AATCTTGAATTTTACATTATTGGCT------TTAAAACCTGTATCTCTGTCTC-TTTtgtt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1412090 189 + 1464242 CATGTTGGAATTTTAATAGGTACTCCC-AATTTCTCTGCAGCAATGAGATGGCGAATTGTATTTTCTAATTGATTATTTCTCAGCAACAATTAATCTTACATAATTCCTGTTA-TTTTCCAATGCGGTAAAGAAGAA-----AATCTTGAATTTTACATTATTGGCT------TTAAAACCTGTATCTGTGTCTC-TTTtgtt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1135005 190 + 81552678 CATGTTGGAATTTTAATAGGTACTCCCAAATTTCTCTGCAGCAATGAGATGGTGAATTGTATTTTCTAATTGATTACTTCTCAGCAATAATTAATCTTACATAATTCCTATTA-TTTTCCAATGCAGCAAAGAAGAA-----AACCTTGAATTTTACATTATTGGCT------TTAAAGCCTGTATCTGTATCTC-TTTTGTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1464432 185 + 108979918 CATGTTGGAATTTTAATAGTTACTCCCAAATTTCTCTGCAGCAATGAGATGGCAAATTGTATTTTCTAATTGATTATTTGTCTGCAACAATTATTCTTACATAATTCCTATTA-TTTTCCAATGCACTAAGGAAGAA-----AATCTTCAATTTT-CATTACTGGCA------TTAAAGCC----TCTGTCTATC-TTTtgtt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1436876 185 - 111193037 CATGTTGGAATTTTAATAGTTACTCCCAAATTTCTCTGCAGCAATGAGATGGCAAATTGTATTTTCTAATTGATTATTTGTCTGCAACAATTATTCTTACATAATTCCTATTA-TTTTCCAATGCACTAAGGAAGAA-----AATCTTCAATTTT-CATTACTGGCA------TTAAAGCC----TCTGTCTATC-TTTtgtt i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1464863 185 + 3644372 CATGTTGGAATTTTAATAGTTACTCCCAAATTTCTCTGCAGCAATGAGATGGCAAATTGTATTTTCTAATTGATTATTTGTCTGCAACAATTATTCTTACATAATTCCTATTA-TTTTCCAATGCACTAAGGAAGAA-----AATCTTCAATTTT-CATTACTGGCA------TTAAAGCC----TCTGTCTATC-TTTtgtt i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1419275 185 - 10304083 CATGTTGGAATTTTAATAGTTACTCCCAAATTTCTCTGCAGCAATGAGATGGCAAATTGTATTTTCTAATTGATTATTTCTCTGCAACAATTATTCTTACATAATTCCTATTA-TTTCCCAATGCACTAAGGAAGAA-----AATCTTCAATTTT-CATTACTGGCA------TTAAAGCC----TCTGTCTATC-TTTtgtt i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1496340 185 - 107702431 CATGTTGGAATTTTAATAGTTTCTCCCAAATTTCTCTGCAGCAATGAGATGGCAAATTGTATTTTCTAATTGATTATTTCTCTGCAACAATTATTCTTACATAATTCCTATTA-TTTTCCAATGCACTAAGGAAGAA-----AATCTTCAATTTT-AATTACTGGCA------TTAAAGCC----TCTGTCTATC-TTTtgtt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 984843 185 - 2200435 CATGTTGGAATTTTAATAGTTACTCCCAAATTTCTCTGCAGCAATGAGATGGCAAATTGTATTTTCTAATTGATTATTTCTCTGCAACAATTATTCTTACAAAATTCCTATTA-TTTCCCAATGCACTAAGGAAGAA-----AATCTTCAATTTT-CATTACTGGCA------TTAAAGCC----TCTGTCTATC-TTTtgtt i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1414357 185 - 13651311 CATGTTGGAATTTTAATAGTTACTCTCAAATTTCTCTGCAGCAATGAGATGGCAAATTGTATTTTCTAATTGATTATTTCTCTGCAACACTTATTCTTACATAATTCCTATTA-TTTTCCAATGCACTAAGGAAGAA-----AATCTTCAATTTT-CATTACTGGCA------TTAAAGCC----TCTGTCTATC-TTTtgtt i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1417611 192 - 108792865 CATGCTGCAATTGTGATAGGTGCTCCCAAATTTCTCTGCAGCAGGAAGATGGTAAATTATATTTTCTAATTGATTACTTCTCAGCAACAATTAATCTTATATAATTCCTATCATTTTTCCAGTGCAGTGAGGAAGAA-----AATCTTGAATTTTACATTAGTGGTG------TTAAAGCCTCATTCTATGTATCTTTTTTTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1247296 190 - 7082604 CACGCTGCAATTGTAATAGGTGCTGCCCAATTTCTCTGCAGCAGTAAGATGGTAAATTGTATTTTCTAAATGATTACTTCTCAGCAATAATTAATCTTATATAATTCCTATTA-TTTTCCAGTGCAGTGAGGAAGAA-----AATCTTGAATTTTGCATTACTGGCG------TTAAAGCCTCATTCTATGTATC-TTTTGTT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1340894 189 + 1864846 CATGTTGCAATTGTAATAGGTGCTCCCAAATTTCTCTGCAGCAGTAAGATGGTAAATTGTATTTTCTAATTGATTACTTCTCAGCAATAATTAATCTTATACAACTCCTATTA-TTTTCCAGTGCAGTGAAGAAGAA-----AATCTTGAATTTTACATTACTGGTG------TTAAAGCCTCATTCTGTGTATC--TTTTTT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 159362 190 + 287728 CACGTTGCAATTGTAACAGGTGCTCCCAAATTTCCCTGCAGCAGTAAGATGGTAAATTATATTTTCTAACTGATTACTTCTCAGCAATAATTAATCTTATATAATTCCTATTA-TTTTCCAGTGCAGTGAGGAAGAA-----AATCTTGAATTTTACATTACTGGTG------TTAAAGCCACATTCTATGTATC-TTTTCTT i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1749978 181 + 4416731 cacatttcaactataatagatactcccaaattgtcttccagt------------aattgtacTTTCTAACTGCTTA-------GAAACCA-TAATATAATTTAATGCCTATAT-TTTTCCAATCTGATAAAGAAAAAAGTAtaatcttgcccttcactttactagtgaattttttaaaaattgtctttatatttc-tctttct i dasNov3.JH576208 I 1025 I 112 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I a score=680592.000000 s hg38.chr2_KI270774v1_alt 152235 74 + 223625 gacctaaagcaagaagctgaggcacaaaata-cattttaaagagtttacttgagccaaaatgagaatagctgccc s panTro5.chr2A 1439181 74 + 111504155 gacctaaagcaagaagctgaggcacagaata-cattttaaagagtttacttgagccaaagtgacaatagctgccc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1388237 74 + 114371477 gacctaaagcaagaagctgaggcacaaaata-cattttaaagagtttacttgagccaaagtgagaatagctgccc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1412279 73 + 1464242 gacctaaagcaagaagctgaggcacaaaata-cattttaaagagtttacttgagccaaaatgagaa-agctgcct i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1135195 74 + 81552678 GACCTAAAGCAAGAAGCtgaggtacaaaata-cattttagagcgtttacttgagccaaaatgagaatagctgccc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1464617 75 + 108979918 gacctaaagcaagaagctgaggcacaaaatatcattttaaagagtttacttgaaccaaaatgagaatagctgccc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1437061 75 - 111193037 gacctaaagcaagaagctgaggcacaaaatatcattttaaagagtttacttgaaccaaaatgagaatagctgccc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1465048 75 + 3644372 gacctaaagcaagaagctgaggcacaaaatatcattttaaagagtttacttgaaccaaaatgagaatagctgccc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1419460 75 - 10304083 gacctaaagcaagaagctgaggcacaaaatatcattttaaggagtttacttgaaccaaaatgagaacagctgccc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1496525 75 - 107702431 gacctaaagcaagaagctgaggcacaaaatatcattttaaggagtttacttgaaccaaaatgagaacagctgccc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 985028 75 - 2200435 gacctaaagcaagaagctgaggcacaaaatatcattttaaggagtttacttgaaccaaaatgagaacagctgccc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1414542 75 - 13651311 gacctaaagcaagaagctgaggcacaaaatatcattttaaagagtttacttgaaccaaaatgagaacagcTGCCC i colAng1.NW_012118821v1 C 0 M 5640 s calJac3.chr14 1417803 72 - 108792865 GACCCaaagaaagaagctgaggcacaaaatatcattttaaatagtttatttgagcc---aagaggacaactgccc i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1247486 70 - 7082604 GACCTAAAGAAAGAAGCTGAGGCACAAAATATCATTTTAAATCGTTTACTTAAG-----ATGACATCAGCTGCCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1341083 75 + 1864846 GATCTAAAGAAAGAAGCTGAGGCACAAACTATCATTTTAAATCGTTTACTTGAGCCAAGAGGACAACAGCTACCC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 159552 75 + 287728 Gacctaaagaaagaagccgaggcacaaaatatcattttaaatagtttacttgagccaagaggacaacaggtgccc i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1750159 112 + 4416731 I a score=884759.000000 s hg38.chr2_KI270774v1_alt 152309 110 + 223625 ggaatacttagatccaaataa---ctttggacgtgagctttgttagatctttgctgcaaacaggtttcaaaggcgaaaaaggtggacaaggagtgagcCTTGGTCCTTCACTC s panTro5.chr2A 1439255 110 + 111504155 ggaatacttagatccaaataa---ccttggacgtgagctttgttagatctttgctgcaaacaggtttcaaaggcgaaaaaggtggacaaggagtgagcCTTGGTCCTTCACTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1388311 110 + 114371477 ggaatacttagatccaaataa---ccttggacgtgagctttgttagatctttgctgcaaacaggtttcaaaggcgaaaaaggtggacaaggagtgagcCTTGGTCCTTCACTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1412352 110 + 1464242 ggaatacttagatccaaataa---ccttggacgtgagctttgttagatctttgctgcaaacaggtttcaaaggcgaaaaaggtggacaaggagtgagcCTTGGTCCTTCACTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1135269 110 + 81552678 agaatacttagacacaaataa---ccttagatgtcagctttgttagatctttgttgcaaacaggtttcaaaggcgaaaaaggtagacaaggagtgagcCTTGGTCCTTCACTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1464692 110 + 108979918 agaacacttagacccaaataa---tcttggacatgagctttgttagatctttgttgcaaacaggtttcaaaggcaaaaaaggtggacaaagagtgagcCTTGGTCCTTCACTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1437136 110 - 111193037 agaacacttagacccaaataa---tcttggacatgagctttgttagatctttgttgcaaacaggtttcaaaggcaaaaaaggtggacaaagagtgagcCTTGGTCCTTCACTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1465123 110 + 3644372 agaacacttagacccaaataa---tcttggacatgagctttgttagatctttgttgcaaacaggtttcaaaggcaaaaaaggtggacaaagagtgagcCTTGGTCCTTCACTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1419535 113 - 10304083 agaacacttagacccaaataacccccttggatatgagctttgttagatctttgttgcaaacaggtttcaaaggcaaaaaaggtggacaaagagtgagcCTTGGTCCTTCACTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1496600 110 - 107702431 agaacacttagacccaaataa---ccttggacgtgagctttgttagatctttgttgcaaacaggtttcaaaggcaaaaaaggtggacaaagagtgagcCTTGGTCCTTCACTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 985103 110 - 2200435 agaacacttagacccaaataa---ccttggatatgagctttgttagctctttgttgcaaacaggtttcaaaggcaaaaaaggtggacaaagagtgagcCTTGGTCCTTCACTC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1417875 98 - 108792865 agaatacttggacccaaataa---ccttggatgtgagctttgttagatctttgctacaaacaagtttcaaagggaaaa------------gaATCAGCCTTGGTCCTTCACTA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1247556 107 - 7082604 AGAATGCTTGGACCCAAATAA---CCGTGGATGTGAGCTTTGTTAGATCTTCATTACAAGCGAGTTTCAAAGGCAAAAAAG---GATAAGAAATCAGCCTCGGTCCTTCACTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1341158 107 + 1864846 AGAATACTTGGACCCAAATAA---CCTTGGATGTGAGCTTTGTTAGATCTTTGTTACAAACAAGTTTCAAAAGCAAAAAAG---GAAAAGAAGTCAGCCTTGGTCCTTCACTG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 159627 107 + 287728 agaatacatggacccaaataa---ccctggatgtgagctttgtttgatctttgttacaaacaagtttcaaaggcaaaaaag---gaaaagAAACCAGCCTTGGTCCTTCACTA i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1750159 112 + 4416731 I e colAng1.NW_012118821v1 1414617 5640 - 13651311 M a score=1130308.000000 s hg38.chr2_KI270774v1_alt 152419 130 + 223625 TATATGATTGCTTGGCTTTTCATTTTGTTTACGGTGCCATTATTCA------------TAAATTTAGGTCGATTTTCGTCAA-TTTTTTTTCTTCTCTATGACATCTACATTGTTATCTTACTGAG-CAGGTCTTCCTTATCTG s panTro5.chr2A 1439365 129 + 111504155 TGTATGATTGCTTGGCTTTTCATTTGGTTTACGGTGCCATTATTCA------------TAAATTTAGGTCGATTTTAGTCAA-TTTTTTTTCTTCTCTATGACATCTAAATGGTTATCTTACTGAG-CAGGTCTTC-TTATCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1388421 129 + 114371477 TATATGATTGCTTGGCTTTTCATTTGGTTTACGGTGCCGTTATTCA------------TAAACTTAGGTCGATTTTAGTCAA-TTTTTTTTCTTCTCTATGACATCTAAATGGTTATCTTACTGAG-CAGGTCTTC-TTATCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1412462 130 + 1464242 TATATGATTGCTTGGCTTTTCATTTTGTTTATGGTGCCTTTATTCA------------TAAATTTAGGTCGATTTTAGTCAA-TTTTTTTTCTTCTCTATGACATCTAAATTGTTATCTTACTGAG-CAGGTCTTCCTTATCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1135379 131 + 81552678 TGTATGATTGCTTGGCTTTTCATTTTGTTTACGGTGCCATTATTCA------------CAAATTTAGGTCGATTTTAGTCAATTTTTTTTTCTTCTCTATGACATCTAAATTGTTATCTTACTGAG-CAGGTCTTCCTTATCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1464802 137 + 108979918 TATATAATTGTTTGGCTTTTCATTTTGTTTACAGTGCCATTATTCA-----TAAGATTTAAATTTCGGTCTATTTTAGTCAA-TTTTTTTTCTTCTTTATGACATCTAAATTGTTATCTTACTGAG-CAGGTCTTCCTTATCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1437246 137 - 111193037 TATATAATTGTTTGGCTTTTCATTTTGTTTACAGTGCCATTATTCA-----TAAGATTTAAATTTCGGTCGATTTTAGTCAA-TTTTTTTTCTTCTTTATGACATCTAAATTGTTATCTTACTGAG-CAGGTCTTCCTTATCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1465233 137 + 3644372 TATATAATTGTTTGGCTTTTCATTTTGTTTACAGTGCCATTATTCA-----TAAGATTTAAATTTCGGTCGATTTTAGTCAA-TTTTTTTTCTTCTTTATGACATCTAAATTGTTATCTTACTGAG-CAGGTCTTCCTTATCTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1419648 137 - 10304083 TATATAATTGCTTGGCTTTTCATTTTGTTTACAGTGCCATTATTCA-----TAAGATTTAAATTTGGGTCGATTTTAGTCAA-TTTTTTTTCTTCCTTATGACATCTAAACTGTTATCTTACTGAG-CAGGTCTTCCTTATCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1496710 137 - 107702431 TATATAATTGCTTGGCTTTTCATTTTGTTTACAGTGCCATTATTCA-----TAAGATTTAAATTTGGGTCAATTTTAGTCAA-TTTTTTTTCTTCTTTATGACATCTAAATTGTTATCTTACTGAG-CAGATCTTCCTTATCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 985213 137 - 2200435 TATATAATTGCTTGGCTTTTCATTTTGTTTACAGTGCCATTATTCA-----TAAGATTTAAATTTGGGTCGATTTTAGTCAA-TTTTTTTTCTTCTTTATGACATCTAAATTGTTATCTTACTGAG-CAGGTCTTCCTTATCTG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1417973 136 - 108792865 TATATGACTGCTCGGCTTTTGATTTTGTTCACAGTGCCATTATTCA-----TAAGTTTTAAATGTGGGTCAAATGTAGTCCA-TTTTCTTTCTTTTCTATG--ATCTAAATTGTCATCTTACTGAGCCAGGTCTTCCTTATCTA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1247663 135 - 7082604 TATATGATTGCTTGGCTTTTCATTTTGTTCACAGTGCCATTATTCA-----TAAGTTTTAAATGTGGGTCAAACATAGTCCA-TTTTCTTTCTTCTCTATG--ATCTAAATTGTTATCTTACTGAG-CAGGTCTTCCTTATCTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1341265 135 + 1864846 TATATGATTGCTTGGCTTTTCATTTTGTCCACAGTGTCATTATTCA-----TAAGTCTTAAATGTGGGTCAAATATTGTCCA-TTTTCTTTCTTCTCTATG--ATCTGAATTGTTATCTTACTGAG-CAGGTCTTCCTTATCTG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 159734 135 + 287728 TATATGATTGCTTGGCTTTTCACTTTGTTCACAGTGCCATTATTCA-----TAAGTTTTCAATGTGGGTCAAATATAGTCCA-TTTTCTTTCTTCTCTATG--ATCTAAATTGTTATCTTACTGAG-CAGGTCTTCCTTATCTG i aotNan1.NW_018513311v1 C 0 I 5 s dasNov3.JH576208 1750271 140 + 4416731 TACAAGATTgctggtcatttaattttgtttgtggtgtcttttttcataaagtaagttttagatattggtgtatttcatttag-tcttttttc--atttatagtgtttaaattgttgtcttgtttag-cagggctttcctatgtg i dasNov3.JH576208 I 112 C 0 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e colAng1.NW_012118821v1 1414617 5640 - 13651311 M a score=34073.000000 s hg38.chr2_KI270774v1_alt 152549 25 + 223625 Gtatatataata-----atatatat----ataaa s panTro5.chr2A 1439494 25 + 111504155 Gtatatataata-----atatatat----ataaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1388550 25 + 114371477 Gtatatataata-----atatatat----ataaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1412592 25 + 1464242 Gtatatataata-----atatatat----ataaa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1135510 29 + 81552678 atatatataata-----atatatatataaataaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1464939 31 + 108979918 atatatattataataatatatatat---aataaa i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1437383 31 - 111193037 atatatattataataatatatatat---aataaa i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1465370 31 + 3644372 atatatattataataatatatatat---aataaa i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1419785 31 - 10304083 atatatataataataatatatatat---aataaa i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1496847 26 - 107702431 atatgtataata-----atatatat---aataaa i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 985350 31 - 2200435 atatatataataataatatatataa---aataaa i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1418109 2 - 108792865 --------------------------------AA i calJac3.chr14 C 0 I 38 s saiBol1.JH378218 1247798 2 - 7082604 --------------------------------AA i saiBol1.JH378218 C 0 I 4 s cebCap1.NW_016107827v1 1341400 2 + 1864846 --------------------------------AA i cebCap1.NW_016107827v1 C 0 I 4 s dasNov3.JH576208 1750411 7 + 4416731 ---------------------------gtgcgaa i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 159869 5 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e colAng1.NW_012118821v1 1414617 5640 - 13651311 M a score=711935.000000 s hg38.chr2_KI270774v1_alt 152574 82 + 223625 tatatttttctatattttattttaaacatatTAAAAACTGGG--CTTGATATACAACTTTGTTTTATTCTGACTCTATTTTGTG s panTro5.chr2A 1439519 82 + 111504155 tatatttttctatattttattttaaacatatTAAAAACTGGG--CTTGATATACAACTTTGTTTTATTATGACTCTATTTTATG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1388575 82 + 114371477 tatatttttctatattttattttaaacatatTAAAAACTGGG--CTTGATATACAACTTTGTTTTATTATGACTCTATTTTATG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1412617 82 + 1464242 tatatttttctatatTTTATTCTAAACATACTAAAAACTGGG--CTTGATATACAACTTTGTTTTATTATGACTCTATTTTGTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1135539 82 + 81552678 tatatttttctatattttattttaaacatatTAAGAACTGGG--CTTGATATACAACTTTGTTTTATTAGGAATCTACTTTGTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1464970 77 + 108979918 tagatttttctatattttattttaaacatatTAAAAACTGGG--TTTGATATACAAC-----TTTATTAGGAATCAATTTTATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1437414 82 - 111193037 tagatttttctatattttattttaaacatatTAAAAACTGGG--TTTGATATACAACTTTGTTTTATTAGGAATCAATTTTATG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1465401 82 + 3644372 tagatttttctatattttattttaaacatatTAAAAACTGGG--TTTGATATACAACTTTGTTTTATTAGGAATCAATTTTATG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1419816 82 - 10304083 tagatttttctatattttattttaaacatatTAAAAACTGGG--TTTGATATACAACTTTGTTTTATTAGGAATCAATTTTATG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1496873 82 - 107702431 tatatttttctatattttattttaaacatatTAAAAACTGGG--TTTGATATATAGCTTTGTTTTATTAGGAATCGAttttatg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 985381 82 - 2200435 tagatttttctatattttattttaaacatatTAAAAGCTGGG--TTTGATATGCAACTTTGTTTTATTAGGAATCAATTTTATG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1418149 82 - 108792865 gatatttttctatattttattttaaaaatattaaaaaCTGGG--TTTGATATACAACTTTGTTATATTAGGAATCTATTTTAGG i calJac3.chr14 I 38 C 0 s saiBol1.JH378218 1247804 81 - 7082604 -atatttttctatattgtatttttaaaatattaaaaaCTGGG--TTTGATATACAACTTCATTATATTGGGAATCTATTTTAGG i saiBol1.JH378218 I 4 C 0 s cebCap1.NW_016107827v1 1341406 81 + 1864846 -ATATTTTTCTGTATTGTATTTTAAAAATATTAAAAACTGGG--TTTGATATACAACTTCGTTATATTAGGAATCTATTTTAGA i cebCap1.NW_016107827v1 I 4 C 0 s aotNan1.NW_018513311v1 159874 82 + 287728 TATATTTTTCTATATTGTATTTTAAAAATATTAAAAACTGGG--TTTGATATACAACTTCGTTATATTAGGAATCTATTTTAGG i aotNan1.NW_018513311v1 I 5 C 0 s dasNov3.JH576208 1750418 83 + 4416731 taaattttcctgtattttattttagtaatattaaagtttggagttttcatata-aaatatgttatattaggaatttatttcatg i dasNov3.JH576208 C 0 I 2011 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e colAng1.NW_012118821v1 1414617 5640 - 13651311 M a score=2194587.000000 s hg38.chr2_KI270774v1_alt 152656 277 + 223625 TAGATAAAATACTGCTTTAGTGAGTAACATTTAAAAAAGCCATGGTGAGAGCAGCAT-CTGCCTCTGTTCC-TAGATAAAGGGCATGATTCTGATGTTTTTCCTCACATACTGTGTCTACTAGGAATTTCTGCTAGACAACTTCAGTTAGAAATTTGAAAATC--TTATTTGTAATTTCCCAAGAATTTTAATGAGGCTTGTGGGTTCCAGCTTTACTCAATACCTTCCCAGCATCGGCAGAGGAGGCCACAGGGCTTCCACTTCACTTCATTATTGTGTG s panTro5.chr2A 1439601 277 + 111504155 TAGATAAAATACTGCTTTAGTGAGTAACATTTTAAAAAGCCATGGTGAGAGCAGCAT-CTGGCTCTGTTCC-TAGATAAAGGGCATGATTCTGATGTTTTTCCTCACATACTGTGTCTACTAGGAATTTCTGCTAGACAACTTCAGTTAGAAATTTGAAAATC--TTATTTGTAATTTCCCAAGAATTTTAATGAGGCTTGTGGGTTCCAGCTTTACTCAATGCCTTCCCAGCATCGGCGGAGGAGGCCACAGGGCTTCCACTTCACTTTATTATTGTGTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1388657 277 + 114371477 TAGATAAAATACTGCTTTAGTGagtaacatttaaaaaagccatggtgagagcagcat-ctggctctgttcc-tagataaagggcatgattctgatgtttttcctcacatactgtgtctactaggaatttctgctagacaacttcagttagaaatttgaaaatc--ttatttgtaattccccaagaattttaatgaggcttgtgggttccagctttactcaatgccttcccagcatcggcggaggaggtcacagggcttccacttcactttattattgtgtg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1412699 277 + 1464242 TAGATAAAATACTGCTTTAGTGAATAACATTTAAAAAAGCCAtggtgagagcagcat-ctggctctgttcc-tagataaagggcatgattctgatgtttttcctcacatactgtgtctactaggaatttctgctagacaacttcagttagaaatttgaaaata--ttatttataatttcccaggaattttaatgaggcttgtgggttccagctttactcaatgccttcccagcattggcggaggaggccacagggcttccacttcacttcattattgtgtg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1135621 280 + 81552678 TAGATAAAATACTGCTTTAGTGAGTAACATTTTAAAAAGCCATGGTGAGAGCAGTATCCTGGCTCTGTTCCTTAGATAAAGGGCATGATTCTGATGTTTTTCCTCACATACGGTGTCTACTAGGAATTTCTGCTAGACAACTTCAGTTAGAAATGTGCAAATC-TTTGTTTGTAATTTCCCAGGAATTTTAATGAGGCTTGTGGGTTCCAGCTTTACTCAATGCCTTCCCAGCATCGGCGGGGGAGGCCACAGGGCTTCCACTTCACTTCATTATCGTATG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1465047 270 + 108979918 TACATAAAATACTGCTTTAGCGAGTAACATTTTAAAAAGCCATGGTGAGAGCAGTATCCTGGCTCTGTTTCTTAGGTAAAGGGCATGATTCTGATGTTTTTCCTCCCATATTGTGTCTACTAGGAATTTCTGCTAGACAACTTCAGTTAGAAAATTGAAATTTTTTTATTTGTGATTTCCCAAGAATTTCAATGAGGCTCGTGGGTTCCAGCTTTACTCAAT-----------GTCGGCGGAGGAGACCACAGGGCTTCCACTTCACTTCATTATTGTGTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1437496 270 - 111193037 TACATAAAATACTGCTTTAGCGagtaacattttaaaaagccatggtgagagcagtatcctggctctgtttcttaggtaaagggcatgattctgatgtttttcctcccatattgtgtctactaggaatttctgctagacaacttcagttagaaaattgaaatttttttatttgtgatttcccaagaatttcaatgaggctcgtgggttccagctttactcaat-----------gtcggcggaggaggccacagggcttccacttcacttcattattgtgtg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1465483 270 + 3644372 TACATAAAATACTGCTTTAGCGAGTAACATTTTAAAAAGCCATGGTGAGAGCAGTATCCTGGCTCTGTTTCTTAGGTAAAGGGCATGATTCTGATGTTTTTCCTCCCATATTGTGTCTACTAGGAATTTCTGCTAGACAACTTCAGTTAGAAAATTGAAATTTTTTTATTTGTGATTTCCCAAGAATTTCAATGAGGCTCGTGGGTTCCAGCTTTACTCAAT-----------GTCGGCGGAGGAGGCCACAGGGCTTCCACTTCACTTCATTATTGTGTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1419898 280 - 10304083 TACATAAAATACTGCTTTAGCGAGTAACATTTTAAAAAGCCATGGTGAGAGCAGTGTCCTGGCTCTGTTTCTTAGGCAAAGGGCATGATTCTGATGTTTTTCCTCCCATATTGTGTCTACTAGGAATTTCTGCTAGACAACTTCAGTTAGAAAATGGAAAATCTTTTATTTGTGA-TTCCCAAGAATTTCAGTGAGGCTTGTGGGTTCCAGCTTTACTCAATGCCTTCCCAGCGTCGGCGGAGGAGGCCACAGGGCTTCCACTTCACTTCATTATTGTGTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1496955 280 - 107702431 tacataaaatactactttagcgagtaacattttaaaaagccatggtgagagcagtatcctggctctgtttcttaggtaaagggcatgattctgatgtttttcctcccatattgtgtctactaggaatttctgctagacaacttccgttagaaaattgaaaatcttttatttgtga-ttcccaagaatttcagtgaggcttgtgggttctagctttactcaatgccttcccagcgtcggtggaggaggccacagggcttccacttcacttcgttattgtgtg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 985463 280 - 2200435 TACATAAAATACTGCTTTAGCGAGTAACATTTTAAAAAGCCATGGTGAGAGCAGTATCCTGGCTCTGTTTCTTAGGCAAAGGGCATGACTCTGATGTTTTTCCTCCCATATTGTGTCTACTAGGAATTTCTGCTAGACAACTTCAGTTAGAAAATTGAAAATCTTTTATTTGTGA-TTCCCAAGAATTTCAGTGAGGCTTGTGGGTTCCAGCtttactcaatgccttcccagcgtcggcggaggaggccacagggcttccacttcacttcattattgtgtg i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1418231 279 - 108792865 TACATAAAATACTGCTTT-GGGAGTGACATTTTTAAAAGCCATGGTGAGAGCAGTATCCTGGCACTGTTCCTCAGATACAGGGCATGATTCTGAAGTTTTTCCTCACGCATTGTGTTTACTAGGAATTTCTGCTAGACAACTTCAGTTAGAAAGTTGAAAATCTTTTATTTGTAATTTCCCAAGAATTTTAAAGAGGCTTACGGGTTACAGATTTACTCAGTGCCTTCCCAGCAGTGGCAGAGGAGGGGACA-CACTTCCACTTCACTTCATTATTGTGTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1247885 280 - 7082604 TACATAAAATACTGCTTTGGGGAGTAACATTTTTGAAAGCCATGGTGAGAGCAGTATCCTGGCACTGTTCCTTAGATAAAAGGCATGATTCTGATGTTCTTCCTCACCTGTTGTGTTTACTAGGAATTTCTGCTAGACAACTTCAGTTAGAAAATGGAAAATCTTTTATTTGTAATTTCCCAAGAATTTTAAAGAGGCTCGTGGCTTACAGATTTACTCAGTGCCTTCCCAGCAGTGGCAGAGGAGGCGACA-CACTTCCACGTCACTTCATTATTGTGTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1341487 266 + 1864846 TACATAAAATACTGCTTTGGGGAGTGACATTTTTGAAAGCCATGGTGAGAGCAGTATCCTGGCACTGTTCCTTAGATAAAAGGCATGATTCTGATGTTCTTCCTCACCTGTTGTGTTTACTAGGAATTCCTGC--------------TAGAAAATTGAAGATCTTTTATTTGTAATTTCCCAAGAATTTTAAAGAGGCTTGTGGCTTACAGATTTACTCCGTGCCTTCCCAGCAGTGGCAGAGGAGGCGACA-CGCTTGCACGTCACTTCATTACTGTGTA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 159956 280 + 287728 TACATAAAATACTGCTTTGGGGAGTAACATTTTTAAAAGCCATGGTGAGAGCAGTATCCTGGCACTGTTCCTTAGATAAAAGGCGTGATTCTGATGTTTTTCCTCACCTATTGTGTTTACTAGGAATTTCTGCTAGACAACTTCAGTTAGAAAATGGAAAATCTTTTATTTGTAATTTCCCAAGAATTTTAAAGAGGCTTGTGGCTTACAGGTTTACTCAGTGCCTTCCCAGCAGTGGCAGAGGAGGTGACA-CACTTCCACTTCACTTCATTATTGTGTG i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1750501 2011 + 4416731 I e colAng1.NW_012118821v1 1414617 5640 - 13651311 M a score=4651839.000000 s hg38.chr2_KI270774v1_alt 152933 672 + 223625 AGCTACACTGGTAGATTTCCAACGCAGTGCCATATTTACATGGCCTGCATGATGGTGATGCAGGttttcatttattcttggattgaatttgctaatattttatttgaa--atgttgcctctctcttcataagcagagttgtgctacagtgctcttttccgatgctgcacctatttgggtgttacaaacacaccagcatctgacagtggtcaggggttgccca-ttcttttactatgctcaggattaccttgtctaaaatcaaatttgggctttttgttttgaataactggtagagcttatttgtgactctggtcctgATAACCTCTGGGGTGGCAGATCTTTGGTTATGGGCTCAGTTCTGGGTGCAGTTAGTCTATTCGAGCCCATAAGTCTTTCCtgttctttattttctattaccttcctattacactttttcatctacttcacatttctcaccctcttatgctgaaagcgagttgagttacgttcactgtgtcgtgc-tttttgacaagtgtagtt-aagactatgtattttcctgtgacccc-ccccc------acaaattttgatacatggtccttacattgatgttaattcaaaataggttttaattcaaataagaatttcttACATTAAACTTGAGCACCCACATGTAAGTGTAATTTCACATAAATGTAAAACTT s panTro5.chr2A 1439878 673 + 111504155 AGCTACACTGGTAGATTTCCAACGCAGTGCCATATTTACATGGCCTGCATGACGGTGATGCAGGttttcatttattcttggattgaatttgctaatattttatctgaa--atgttgcctctctcttcataagcagagttgtgctacagtgctcttttcCGATGCTGCACCTATTTGGGTGTTACAAACACACCAGCATCTGACAGTGGTCAGGGGTTGCCCA-TTCTTTTACTACGCTCAGGATTACCTTGTCTAAAATCAAATTTGGGCTTTTTGTTTTGAATAAGTGGTAGAGCTTATTTGTGACTCTGGACCTGATAACCTCTGGGGTGGCAGATCTTTGGTTATGGGCTCAGTTCTGGGTGCAGTTAGTCTATTCGAGCCCATAAGTCTTTCCTGTTCTTTATTTTCTATTACCTTCCTATTACGCTTTTTCATCTACTTCACATTTCTCACCCTCTTATGCTAAAAGCGAGTTGAGTTACGTTCACTGTGTCATGC-TTTTTGACAAGTGTAGTT-AAGACTATGTATTTTCCTATGACCCC-CCCCC-----CACAAATTTTGATACATGGTCCTTACATTGATGTTAATTCAAAATAGGTTTTAATTCAAATAAGAATTTCTTACATTAAACTTGAGCACCCACATGTAAGTGTAATTTCACATAAATTTAAAACTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1388934 671 + 114371477 agctacactggtagatttccaacgcagtgccatatttacatggcctgcatgacggtgatgcaggttttcatttattcttggattgaatttgctaatattttatctgaa--atgttgcctctctctacataagcagagttgtgctacagtgctcttttccgatgctgcacctatttgggtgttacaaacacaccagcatctgacagtggtcaggggttgccca-ttcttttactatgctcaggattaccttgtctaaaatcaaatttgggctttttgttttgaataagtggtagagcttatttgtgactctggacctgataacctctggagtggcagatctttggttatgggctcagttCTGGGTGCAGTTAGTCTATTCGAGCCCATAAGTCTTTCCTGTTCTTTATTTTCTATTACCTTCCTATTACGCTTTTTCATCTACTTCACATTTCTCACCCTCTTATGCTAAAAGCGAGTTGAGTTACATTCACTGTGTCGTGC-TTTTTGACAAGTGTAGTT-AAGACTATGTATTTTCCTATGACCCC-CCCC-------ACAAATTTTGATACATGGTCCTTACATTGATGTTAATTCAAAATAGGTTTTAATTCAAATAAGAATTTCTTACATTAAACTTGAGCACCCACATGTAAGTGTAATTTCACATAAATTTAAAACTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1412976 674 + 1464242 agctacactggtagatttccaacgcagtgccatatttacatggcctgcatgatggtgatgcaggttttcatttattcttggattgaatttgctaatattttatttgaa--atgttgcctctctcttcataagcagagttgtgctacagtgctcttttccgatgctgcacctatttgggtgttacaaacacaccagcatctgacagtggtcaggggttgccca-ttcttttactacgctcaggattaccttgtctaaaatcaaatttgggctttttgttttgaataactggtacagcttatttgtgactctggtcctgataacctctggggtggcagatctttggttatgggctcagttCTGGGTGCAGTTAGTCTATTCGAGCCCATAAGTCTTTCCTGTTCTTTATTTTCTATTACCTTCCCATTACGCTTTTTCATCTACTTCACATTTCTCACCCTCTTATGCTAAAAGTGAGTTGAGTTACGTTCACTGTGTCATGC-TTTTCGACAAGTGTAGTT-AAGACCATGTATTTTCCTATGACCCC-CCCCC----CCACAAATTTTGATACATGGTTCTTACATTGATGTTAATTCAAAATAGGTTTTAATTCAAATAAGAATTTCCTACATTAAACTTGAGCACCCACATGTAAGTGTAATTTCACATAAATGTAAAACTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1135901 657 + 81552678 AGCTACACTGGTAGATTTC-------------------CATGGCCTGCATGATGGTGATGCAGGttttcatttattcttggattgaatttgctaatactttatttgaa--atattgcatctctcttcataagcagagttgtgctacagtgctcttttctGACACTGCACCTATTTGGGTGTTACAAACACACCAGCAATTGACAGTGGTCAGGGGCTGCCCA-TTCTTTTACTACGCTCAGGATTACCTTGTGTAAAATCAAATTTGGGTTCTTTGTTTTGAACAACTGGGAGAACTTATTTGTGACTCTGGTCCTGATAACCTCTGGGGTGGCAGATCTTTAGTTATGGGCTCCGTTCTGGGTGCAGTTAGTCTATTCGAGCCCATAAGTCTTTCCtgttctttattttctgttactttcctattacgccttttcatctacttcacatttctcactctcttatggtaacagcaagttgagttacattcactgtgttgtgc-ttttcgacaagtgtagtt-aagactatgtattttcctatgaccac-ccccca--cacacagattttgatacatggtccttacattgatgttagttcaaaataggttttaatttaaataagaacttcttACATTAAACTTGAGCACCCACATGTAAGTGTAATTTCACATAAATGTAAAACTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1465317 675 + 108979918 AGCTACACTGGTAGACTTCCAACGCAGTGCCACCCTTACATGGCCTGCAGGATGGTGATGCAGGTTTTCACTTATTCTTGGATTGAATTTGCTAATATTTGATTTGAA--ATGTTGCATCTCTCTTCATAAGCAGAGTAATGCTACAGTGCTCTTTTCTGATGCTGCACCCATTTGGGTGTTACAGACACACCAGCATCTGACAGTGATCA-GGGTTGCCCATTTCTTTCACTATGCTCAGGATTACCTTGTCTAGAATAAGATTTGGGTTTTTTGTTTTGAATAACTGGTAGATCTTATTTGTGACTCTGGTCCTGATAACCTCTGGGGTGGCAGATCTTTGGTTATGGGCTCAGTTCTGGGTGCAGTTAGTCTATTCGGGCCCATAAGTCTTTCCTGTTCTTTGTTTTCTACTGCCTTCCTATTACGCCTTTTCATCTGCTTCACATTTCTCAACTTCTTATGGTAAAAGCGAATTGAGTTACGTTCACTGCCTCATAC-TTTTCGACAAGTGTAGTTAAAGAC----TGTTTTCCTATGACCTG-CCCCCGCCCCCACAAATTTTGATGCATGGTCCTTACGTTGATGTTAGTTCAAAATAGTTTTTAATTCAAATAAGAATTTCTTACATTACACAGGAGCACCCACATGTAAGTGTAATTTCACATAAATGTAAAACTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1437766 674 - 111193037 agctacactggtagacttccaacgcagtgccacccttacatggcctgcaggatggtgatgcaggttttcacttattcttggattgaatttgctaatatttgatttgaa--atgttgcatctctctttataagcagagtaatgctacagtgctcttttctgatgctgcacccgtttgggtgttacagacacaccagcatctgacagtgatca-gggttgcccatttctttcactatgctcaggattaccttgtctagaataagatttgggttttttgttttgaataactggtagatcttatttgtgactctggtcctgataacctctggggtggcagatctttggttatgggctcagttCTGGGTGCAGTTAGTCTATTCGGGCCCATAAGTCTttcctgttctttgttttctactgccttcctattatgccttttcatctgcttcacatttctcaacttcttatggtaaaagcgaattgagttacgttcactgcctcatac-ttttcgacaagtgtagtt-aagac----tattttcctatgacctg-cccccgcccccacaaattttgatgcatggtccttacgttgatggtagttcaaaataggttttaattcaaataagaatttcttACATTACACAGGAGCACCCACATGTAAGTGTAATTTCACATAAATGTAAAACTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1465753 674 + 3644372 AGCTACACTGGTAGACTTCCAACGCAGTGCCACCCTTACATGGCCTGCAGGATGGTGATGCAGGTTTTCACTTATTCTTGGATTGAATTTGCTAATATTTGATTTGAA--ATGTTGCATCTCTCTTCATAAGCAGAGTAATGCTACAGTGCTCTTTTCTGATGCTGCACCCGTTTGGGTGTTACAGACACACCAGCATCTGACAGTGATCA-GGGTTGCCCATTTCTTTCACTATGCTCAGGATTACCTTGTCTAGAATAAGATTTGGGTTTTTTGTTTTGAATAACTGGTAGATCTTATTTGTGACTCTGGTCCTGATAACCTCTGGGGTGGCAGATCTTTGGTTATGGGCTCAGTTCTGGGTGCAGTTAGTCTATTCGGGCCCATAAGTCTTTCCTGTTCTTTGTTTTCTACTGCCTTCCTATTATGCCTTTTCATCTGCTTCACATTTCTCAACTTCTTATGGTAAAAGCGAATTGAGTTACGTTCACTGCCTCATAC-TTTTCGACAAGTGTAGTT-AAGAC----TATTTTCCTATGACCTG-CCCCCGCCCCCACAAATTTTGATGCATGGTCCTTACGTTGATGTTAGTTCAAAATAGGTTTTAATTCAAATAAGAATTTCTTACATTACACTGGAGCACCCACATGTAAGTGTAATTTCACATAAATGTAAAACTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1420178 673 - 10304083 AGCTACACTGGTAGACTTCCAACACAGTGCCACCCTTACATGGCCTGCATGATGGTGATGCAGGttttcacttattcttggattgaatttgctaatatttta-ttgaa--atgttgcatctctcttcataagcagagttatgctacagtgctcttttctGATGCTGCACCTATTTGAGTGTTACAGACACACCAGCATCTGACAGCGGTCA-GGGTTGCCCATTTCTTTCACTATGCTCAGGATTACCTTGTCTAGAATGAGATTTGGGTTTTTTGTTTTGAATAACTGGTAGAGCTTATTTGTGACTCTGGTCCTGATAACCTCTGGGGTGGCAGATCTTTGGTTATGGGCTCAGTTCTGGGTGCAGTTAGTCTATTCGGGCCCATAAGTCTTTCCTGTTCTTTGTTTTCTACTGCCTTCCTATCATGCCTTTTCATCTGCTTCACATTTCTCAACTTCTGATGGTAAAAGCGAATTGAGTTACGTTCACTGCGTCATAC-TTTTCGACAAGTGTAGTT-AAGAC----TATTTTCCTATGACCTG-CCCCCGCCCCCACAAATTTTGATGCATGGTCCTTACGTTGATGTTAGTTCAAAATAGGTTTTAATTCAACTAAGAATTTCTTACATTACACTGGAGCACCCACATGTAAGTGTAATTTCACATAAACGTAAAACTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1497235 672 - 107702431 agctacactggtagacttccaacgcagtgccatccttacatggcctgcaggatGGTGATGCAGGttttcacttattcttggattgaatttgctaatattttatttgaa--atgttgcatctctcttcataagcagagttatgctacagtgctcttttctgatgctgcacctgtttggGTGTT----ACACACCAGCATCTGACAGTGGTCA-GGGTTGCCCATTTCTTTCACTATGCTCAGGATTACCTTGTCTAGAATGAGATTTGGGTTTTTTGTTTTGAACAACTGGTAGAGCTTATTTGTGACTCTGGTCCTGATAACCTCTGGGGTGGCAGATCTTTGGTTATGGGCTCAGTTCTGGGTGCAGTTAGTCTATTCGGGCCCATAAGTCTttcctgttctttgttttctactgccttcctattatgccttttcatctgcttcacatttctcaacttcttatggtaaaagcaaattgagttacgttcactgcgtcatac-tttttgacaagtggagtt-aagac--tgtattttcctatgacctg-cccccgcccccacaaatcttgatgcatggtccttacgttgatgttagttcaaaataggttttaattcaaataagaatttcttACATTACACTGGAGCACCCACATGTAAGTGTAATTTCACATAAATGTAAAACTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 985743 673 - 2200435 agctacactggtagacttccaacgcagtgccacccttacatggcctgcaggatggtgatgcaggttttcacttattcttggattgaatttgctaatatttta-ttgaa--atgttgcatctctcttcataagcagagttatgctacagtgctcttttctgatgctgcacctgtttgggtgttacagacacaccagcatctgacagtggtca-gggttgcccatttctttcactatgctcaggattaccttgtctagaatgagatttgggttttttgttttgaataactggtagatcttatttgtgactctggtcctgataacctctggggtggcagatctttggttatgggctcagttCTGGGTGCAGTTAGTCTATTCGGGCCCATAAGTCTTTCCTATTCTTTGTTTTCTACTGCCTTCCTATTATGCCTTTTCATCTGCTTCACATTTCTCAACTTCTGATGGTAAAAGCGAATTGAGTTACGTTCACTGCGTCATAC-TTTTCGACAAGTGTACTT-AAGAC----TATTTTCCTGTGACCTG-CCCCCGCCCCCACAAATTTTGATGCATGGTCCTTACGTTGATGTTAGTTCAAAATAGGTTTTAATTCAAATAAGAATTTCTTACATTACACTGGAGCACCCACATGTAAGTGTAATTTCACGTAAATGTAAAACTT i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1248165 652 - 7082604 AGCGACGCTGGTAGATTTCCAATGCAGCGCCATCTTTAC-TGGCCTGCGTGACGCGGATGCAGAttttcatgtattcttggatttgatttgctaatatttcatcggaa--atgctgcatctctgttcataagcagagtt--------gTGTTC--TTCCAATGCTGCACCTGTTTGGGTGTTACAGACACACCAGCATTTGACAGCGGGCAGGGGTTGCCGG-CTCTTTCACTACGCTCAGGGTTACCTTACCTAAAATCAAACTAGGG-TTTTTGTTTTGAATAACTGGTAGAGCTTATTTGCGACTCTTGTCTTGATAACCTTTGGGGTGGCAGATATTTGGTTCTGGGCTCAGTTCTGGGTGCAGTTAGTCTATTCAGGCCCACAAGTCTTTGCTGTTCTTGATTTTCTATTACCTTCCTATTACGC-----------CTTCACATTTCTCGTCCTCTTATGGCAAATGTGAGTTGAGTTAGTGTCACTGTGTCTTTCTTTTTTAAGAAATGTAGTT-AAGACTATGTATTTTTGCATAACCCTGCCAAA-----AAAAAATTTTGATAGATGAGCCTTACATTGATGTTAGTTCAAAATAGGTTTTAATTCAAATAAGTATTTCTTACATTAAACTTGAGCACCCAAACGTAGGTGTAATTTCACATAAATGTAAAACTT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1341753 658 + 1864846 AGCTACGCTGTTAGGTTTCCAGTGCAGCGCCATCTTTAC-TGGCCCACGTGACGGGGATGCAGGttttcatgtattcttggattcgatttgctaatattttatctgaa--atgctgcatctctgttcataggcagagtt--------gTGCTC--TTCCAGTGCTGCACCGGTTTGGGTGTTACAGACACACCAGCACCTGACGGCGGTCAAGGGTTGCCAA-CTCTT--ACTACGCTCAGGGGTACCTTGCCTAAAATCAAACTCGGG-TTTTCGTTTTGAATAACTGGTAAAGCTTATTTGTGACTCTGGTCCTGATAACCTTTGGGGTGGCAGACCTTTGGCTCTGGGCTCAGTTCTGGGTGCAGTTAGTCTATTTGGGCCCATAAATCTTTCCTGTTCTTGATTTCCTATTACCTTCCTATTACGCCTTTTTATCTACTTCACATTTCTCACCCTCTTATGGCAAATGCGAGTTGAGTTACTGTCACTGTGTCTTTC-TTTTTGACAAATGTAGTT-AAGACTATGTATTTTTGTATAACCC--CCCAA-----AAAAAATTTTGATAGATGGTCCTTAAGTTGATGTTAGTTCAAAATAGGTTTTAATTCAAATAAGTATTTCTTACATTAAACTTGAGCACCCAAATGTAAGTGTAATTTCACATAAATGGAAAACTT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 160236 672 + 287728 AGCTAGGCTGGTAGATTTCCAGTGCACCTCCATCTTTACATGGCCTGCGTGACAGTGATGCAGAttttcatgtattcttggattcagtttgctaatatttcatctgaaatatgctgcatctctgttcataagcagagttgtgttgcagtgctc--ttCCAGTGCTGCACCTGTTCGTGTGTTACGGACACGCAAGCATCTGACAGCGGTCAGGGGTTGCCGC-CTCCTTCAGTACGCTCGGGATTACCTTGCCTGAAATCAAACTAGGG-TTTTTGTTTTGAATAACTGGTAGAGCTTATTTGTGACTCTTGTCCTGATAACCTTTGGGGTGGCAGATCCTTGGTTCTGGGCTCAGTTCTGGGTGCAGTTAGTCTATTCGGGCCCACAAATCTTTCCTGTTCTTGATTTCCTGTTACTTTCCTATTACGCCTTTTTATCTACTCCACATTTCTCGCCCTCTTATGGCAAACGTGAGTTGAGTTAGGGTCACTGCGTCTTTC-TTTTTGACAAATGTAGTT-AAGACTATGTATTTTTGTATAAACCT-CCCCC-----CAAAAATTCTGATAGATGGTCTTTATGTTGATGTTAGTTCAAAATAGGTTTTAATTCAAATAAATATTTCTTACATTAAACTTGAGCACCCAAATGTAAGTGTAATTTCACATAAATGTAAAACTT i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1750501 2011 + 4416731 I e calJac3.chr14 1418510 0 - 108792865 C e colAng1.NW_012118821v1 1414617 5640 - 13651311 M a score=2365551.000000 s hg38.chr2_KI270774v1_alt 153605 286 + 223625 AAACTGTGCCTGACTCTCCCGACACGAGTCTCTTCCTC-----------------------------------------------------------------------------------------------TCCCTCCCTCATTTGCTAGACTCTCCTCCTGCTCACTCCCATGTTCTCCACTCATGCCCCTGCCCCCAAACCA-ATCATTTGACTCCCAAATGTTGATATTTGAA--GTGTGTGTAGGGGAAAGGGGGCATGATAAATGAAACTAGAATAGTAAGAAGCTGGTGTAGACAGCATAGTGGGCTCAAAGGGATTCACTGGGCACCCCGTTTTAATCAGCATGCCCTTGCTATGATCTCAGCACTCATGGCATG s panTro5.chr2A 1440551 286 + 111504155 AAACTGTGCCTGACTCTCCCGATATGTGGCTCTTCCTC-----------------------------------------------------------------------------------------------TCCCTCCCTCATTTGCTAGACTCTCCTCCTGCTCACTCCCATGTTCTCCACTCATGCCCCTGCCCCCAAACCA-ATCACTTGACTCCCAAATGTTGATATTTGAA--GTGTGTGTAGGGGAAAGGGGGCATGATAAATGAAACTAGAATAGTAAGAAGCTGGTGTAGACAGCATAGTGGGCTCAAAGGGATTCACTGGGCACCCCGTTTTAATCAGCATGCCCTTGCTATGATCTCAGCACTCATGGCATG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1389605 286 + 114371477 AAACTGTGCCTGACTCTCCTGATATGTGGCTCTTCCTC-----------------------------------------------------------------------------------------------TCCCTCCCTCATTTGCTAGACTCTCCTCCTGCTCACTCCCATGTTCTCCACTCATGCCCCTGCCCCCAAACCA-ATCACTTGACTCCCAAATGTTGATATTTGAA--GTGTGTGTAGGGGAAAGGGGGCATGATAAATGAAACTAGAATAGTAAGAAGCTGGTGTAGACAGCATAGTGGGCTCAAAGGGATTCACTGGGCACCCCGTTTTAATCAGCATGCCCTTGCTATGATCTCAGCACTCATGGCATG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1413650 286 + 1464242 AAACTGTGCCTGACTCTCCCGACACGTGGCTCTTCCTC-----------------------------------------------------------------------------------------------TCCCTCCCTCATTTGCTAGACTCTCCTCCTCCTCACTCCCATGTTCTCCACTCATGCCCCTGTCCCCAAACCA-ATCACTTGACTCCCAAATGTTGATATTTGAA--GTGTGTGTAGGGGAAAGGGGGCATGATAAATGAAACTAGAATAGTAAGAAGCTGGTGTAGACAGCATAGTGGGCTCAAAGAGATTCACTGGGCACCCTGTTTTAATCAGCATGCCCTTGCTATGATCTCAGCACTCATGGCATG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1136558 288 + 81552678 AAACTGTGCCTGACTCTCCTGACACGTGGCTCTTCCTC-----------------------------------------------------------------------------------------------TCCATCCCTC-TTTGCTAGACTCTCCTCCTCCTCACTCCCGTGTTCTCCACTCATGCCCCTGCCCCCAAACCAGATCACTTGACTCCCAAATGTTGATATTTGAAGTGTGTGTGTAGGGGGAAGGGGGCGTGATAAATGAAACTAGAATCGTAAGAAGCTGGTGTAGACAGCATAGTGGGTTCAAAGGGATTCACTGGGCACCCCGTTTTAATCAGCATGCCCTTGCTGTGATCTGAGTGCTCATGGCATG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1465992 289 + 108979918 AAACTGTGCCTGACTCTCCTGACATGTGGCTTTTCCTC-----------------------------------------------------------------------------------------------TCCCTCCCTTACTTGCTAGACTCTCCTGCTTCTTACTCCCATGTTCTCCACTCATGCCCCTGTCCCCAAACCAGATCACTTGACTCCCAAATGTTGATATTTGAAGTGTGTGTGTAAGGGGAAGGGGGCGTGATAAATGAAACTAGAATAGTGAGAAGTTGGTGTAGACAGCATAGTGGGCTCAAAGGGATTCACTGGGCACCCCGTTTTAATCAGCACGCCCTTGCTGTGATCTGAGCGCTCATGGCATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1438440 289 - 111193037 AAACTGTGCCTGACTCTCCTGACATGTGGCTTTTCCTC-----------------------------------------------------------------------------------------------TCCCTCCCTTACTTGCTAGACTCTCCTGCTTCTCACTCCCATGTTCTCCACTCATGCCCCTGTCCCCAAACCAGATCACTTGACTCCCAAATGTTGATATTTGAAGTGTGTGTGTAAGGGGAAGGGGGCGTGATAAATGAAACTAGAATAGTGAGAAGTTGGTGTAGACAGCATAGTGGGCTCAAAGGGATTCACTGGGCACCCCGTTTTAATCAGCACGCCCTTGCTGTGATCTGAGCGCTCATGGCATG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1466427 289 + 3644372 AAACTGTGCCTGACTCTCCTGACATGTGGCTTTTCCTC-----------------------------------------------------------------------------------------------TCCCTCCCTTACTTGCTAGACTCTCCTGCTTCTCACTCCCATGTTCTCCACTCATGCCCCTGTCCCCAAACCAGATCACTTGACTCCCAAATGTTGATATTTGAAGTGTGTGTGTAAGGGGAAGGGGTCGTGATAAATGAAACTAGAATAGTGAGAAGTTGGTGTAGACAGCATAGTGGGCTCAAAGGGATTCACTGGGCACCCCGTTTTAATCAGCACGCCCTTGCTGTGATCTGAGCGCTCATGGCATG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1420851 384 - 10304083 AAACTGTGCCTGACTCTCCCGACATGTGGCTTTTCCTCTCCGTAAAACTTAAACTGTGCCTGACTCTCCCGACATGTGGCTTTTCCTCTCCGTAAAACTTAAACTGTGCCTGGCTCTCCCGACATGTGGCTTTTCCCTCCCTTACTTGCTAGACTCCCCTGCTTCTCACTCCCATGTTCTCCACTCATGCCCCTGTCCCCAAACCAGATCACTTGACTCCCAAATGTTGATATTTGAAGTGTGTGTGTAAGGGGAAGGGGGCGTGATAAATGAAACTAGAATAGTGAGAAGTTGGTGTAGACAGCATAGTGGGCTCAAAGGGATTCACTGGGCACCCCGTTTTAATCAGCACGCCCTTGCTGTGATCTGAGCGCTCATGGCATG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1497907 289 - 107702431 AAACTGTGCCTGACTCTCCTGACACGTGGCTTTTCCTC-----------------------------------------------------------------------------------------------TCCCTCCCTTACTTGCTAGACTCTCCTGCTTCTCACTCCCATGTTCTCCACTCATGCCTCTGTCCCCAAACCAGATCACTTGACTCCCAAATGTTGATATTTGAAGTGTGTGCGTAAGGGGAAGGGGGCGTGATAAATGAAACTAGAATAGTAAGAAGTTGGTGTAGACAGCATAGTGGGCTCAAAGGGATTCACTGGGCACCCTGTTTTAATCAGCACGCCCTTGCTGTGATCTGAGCGCTCATGGCATG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 986416 289 - 2200435 AAACTGTGCCTGACTCTCCTGACATGTGGCTTTTCCTC-----------------------------------------------------------------------------------------------TCCCTCCCTTACTTGCTAGACTCTCCTGCTTCTCACTCCCATGTTCTCCACTCATGCCCCTGTCCCCAAACCAGATCACTTGACTCCCAAATGTTGATATTTGAAGTGTGTGTGTAAGGGGAAGGGGGCGTGATAAATGAAACTAGAATAGTGAGAAGTTGGTGTAGACAGCATAGTGGGCTCAAAGGGATTCACTGGGCACCCCGTTTTAATCAGCACGCCCTTGCTGTGATCTGAGCGCTCATGGCATG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1418510 284 - 108792865 AAATTGCGCCTGA--CTCCTGACACGTGGCCCTTCCTC-----------------------------------------------------------------------------------------------TCCCTCCCTCA-TTGTTGGCCTCTCCCC-CACTCACTCCCACGTTCTCCACTCATGCCTCCGCCTCCAAACCGGATCACCTGACTCCCAGATGTTGACATTTGAAGTGTGTGTGTAGGGGGAAGGGGACAAGATAAATGAAACTAGAATAGTAAGAAGCTGGTGTAGACAGCATAGTGGGCTCAAAGGAGTTCACAGGGCACCCCATTTTAATCTGCATGCCCTTGCTGTGA-CTGAATGCTTGTGGCCAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1248817 282 - 7082604 AAATTGTGCCCGACTCTCCTGACACGTGGCTCTTCCTC-----------------------------------------------------------------------------------------------TCCCTCCCCCA-TTGCTAGCCTCTCCCC---CCCACTCCCAACTTCTCCACTTGTGCCTCTGCCCTCAAACCAGATCACCTGATTCCCAGATGTTGATATTCGAA--GTGTGTGTAGGGGGAAGGAGACATGATAAGTGAAACTAGAATAGTAAGAAGCTGGTGTAGACAGCAGAGTGGG-TCAAAGGAATCCACAGGGCACCCCATTTTAATCTGCATGCCCTTGCTGTGATCTGAATGCTCGTGGCCTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1342411 288 + 1864846 AAATTGTGCCTGACTTTCCTGACATGTGGCTCTTCCTC-----------------------------------------------------------------------------------------------TCCCTCCCTCA-TTGCTAGCCTCTCCCCTCCCTCACTCCCACGTTTTCCACTCATGCCTCTGCCCCCAAACCAGATCACCCGACTCCCAGATGTTGATATTTGAAGTGTGTGTGTAGGGGGAAGGGGACATGATAAATGAGACTAGAATAGTAAGAAGCTGGTGTAGACAGCGTAGTGGGCCCAAAGGAATTCACAGGGCACCCCATTTTAATCTTCATGCCCTTGCTGTGATCTGAATGCTCGTGGCCTG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 160908 286 + 287728 AAATTGTGCCTGACTCTCCTGACACATGGCTCTTCCTC-----------------------------------------------------------------------------------------------TCCCTCCCTCA-TTGCTAGCCTCTCCCC-AGCTCACTCCCACATTCTCCACTCATGCCTCTGCCCCCAAACCAGATCACCAGACTCCCAGATGTTGATATTTGAAGTGTGTGTGTAGGGGGAAGGGGACAAGATAAATGAAACTAGAATAGTAAGAAGCTGGTGTAGACAGCATAGTGGGCTCAAAGGAGTTCACAGGGCACCCCATTTTAA-CTGCATGCCCTTGCTGTGATCCGAGTGCTCGTGGCCTG i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1750501 2011 + 4416731 I e colAng1.NW_012118821v1 1414617 5640 - 13651311 M a score=-1250.000000 s hg38.chr2_KI270774v1_alt 153891 1 + 223625 C s panTro5.chr2A 1440837 1 + 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1389891 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1413936 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1136846 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1466281 1 + 108979918 G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1438729 1 - 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1466716 1 + 3644372 G i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1421235 1 - 10304083 G i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1498196 1 - 107702431 G i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 986705 1 - 2200435 G i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 161194 0 + 287728 C e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1249099 0 - 7082604 C e cebCap1.NW_016107827v1 1342699 0 + 1864846 C e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1750501 2011 + 4416731 I e calJac3.chr14 1418794 0 - 108792865 C e colAng1.NW_012118821v1 1414617 5640 - 13651311 M a score=210661.000000 s hg38.chr2_KI270774v1_alt 153892 28 + 223625 CCTTCCCATGATCCTGATGTTCATGGTG s panTro5.chr2A 1440838 28 + 111504155 CCTTCCCATGATCCTGATGCTCATGGTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1389892 28 + 114371477 CCTTCCCATGATCCTGATGCTCATGGTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1413937 28 + 1464242 CCTTCCCATGATCCTAATGTTCATGGTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1136847 28 + 81552678 CCTTCCCATGATCCTGATGTTCATGGTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1466282 28 + 108979918 CCTTGCCATGATCCTGATGCTCATGGTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1438730 28 - 111193037 CCTTGCCATGATCCTGATGCTCATGGTG i macFas5.chr13 C 0 I 62 s macNem1.NW_012011978v1 1466717 28 + 3644372 CCTTGCCATGATCCTGATGCTCATGGTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1421236 28 - 10304083 CCTTGCCATGATCCTGATGCTCATGGTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1498197 28 - 107702431 CCTTCCCATGATCCTGATGCTCATGGTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 986706 28 - 2200435 CCTTGCCATGATCCTGATGCTCATGGTG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1418794 28 - 108792865 CCTTCCCATGATCGGAATGTTCCCAGCG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1249099 28 - 7082604 CCTTCCCATGATCTGAATGTTCCTAGCG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1342699 28 + 1864846 CCTTCCCATGATCTGAATGTTCCTAGCG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 161194 28 + 287728 CCTTCCCATGATCTGAATGTTCCTAGCA i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1750501 2011 + 4416731 I e colAng1.NW_012118821v1 1414617 5640 - 13651311 M a score=43245.000000 s hg38.chr2_KI270774v1_alt 153920 11 + 223625 TGCCCTTCCCA s panTro5.chr2A 1440866 11 + 111504155 TGCCCTTCCCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1389920 11 + 114371477 TGCCCTTCCCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1413965 11 + 1464242 TGCCCTTCCCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1136875 11 + 81552678 TGCCCTTCCCA i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1438820 11 - 111193037 TGCTCTTCCTG i macFas5.chr13 I 62 C 0 s calJac3.chr14 1418822 11 - 108792865 TGCCCTTCCCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1249127 11 - 7082604 TGCCCTTCCCA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1342727 11 + 1864846 TGCCCTTCCCA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 161222 11 + 287728 TGCCCTTTCCA i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1750501 2011 + 4416731 I e colAng1.NW_012118821v1 1414617 5640 - 13651311 M e manLeu1.NW_012103754v1 986734 0 - 2200435 C e chlSab2.chr14 1498225 0 - 107702431 C e cerAty1.NW_012000820v1 1421264 0 - 10304083 C e macNem1.NW_012011978v1 1466745 0 + 3644372 C e rheMac8.chr13 1466310 0 + 108979918 C a score=6827.000000 s hg38.chr2_KI270774v1_alt 153931 5 + 223625 TGATC s panTro5.chr2A 1440877 5 + 111504155 TGATC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1389931 5 + 114371477 TGATC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1413976 5 + 1464242 TGATC i gorGor5.CYUI01015607v1 C 0 I 112 s nomLeu3.chr19 1136886 5 + 81552678 TGATC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1438831 5 - 111193037 TGATC i macFas5.chr13 C 0 C 0 s calJac3.chr14 1418833 5 - 108792865 TGATG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1249138 5 - 7082604 TTCTT i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 161233 5 + 287728 TTCCT i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1342738 0 + 1864846 C e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1750501 2011 + 4416731 I e colAng1.NW_012118821v1 1414617 5640 - 13651311 M e manLeu1.NW_012103754v1 986734 0 - 2200435 C e chlSab2.chr14 1498225 0 - 107702431 C e cerAty1.NW_012000820v1 1421264 0 - 10304083 C e macNem1.NW_012011978v1 1466745 0 + 3644372 C e rheMac8.chr13 1466310 0 + 108979918 C a score=19269.000000 s hg38.chr2_KI270774v1_alt 153936 14 + 223625 CTGATGCTCATGGT s panTro5.chr2A 1440882 14 + 111504155 CTGATGCTCATGGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1389936 14 + 114371477 CTGATGCTCATGGT i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1136891 14 + 81552678 CTGATGCTCATGGT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1438836 14 - 111193037 TCAATGCTGATATC i macFas5.chr13 C 0 C 0 s calJac3.chr14 1418838 14 - 108792865 CAGATGTTCCTAGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1249143 14 - 7082604 TGAGTGCTCATAGT i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 161238 14 + 287728 TGAGTGCTCATGGT i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1342738 0 + 1864846 C e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1750501 2011 + 4416731 I e colAng1.NW_012118821v1 1414617 5640 - 13651311 M e manLeu1.NW_012103754v1 986734 0 - 2200435 C e chlSab2.chr14 1498225 0 - 107702431 C e cerAty1.NW_012000820v1 1421264 0 - 10304083 C e macNem1.NW_012011978v1 1466745 0 + 3644372 C e rheMac8.chr13 1466310 0 + 108979918 C e gorGor5.CYUI01015607v1 1413981 112 + 1464242 I a score=25855.000000 s hg38.chr2_KI270774v1_alt 153950 6 + 223625 GTGCCC s panTro5.chr2A 1440896 6 + 111504155 GTGCCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1389950 6 + 114371477 GTGCCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1414093 6 + 1464242 ATGCCC i gorGor5.CYUI01015607v1 I 112 C 0 s nomLeu3.chr19 1136905 6 + 81552678 GTGCCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1466310 5 + 108979918 -TGCCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1438850 6 - 111193037 GTGCCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1466745 5 + 3644372 -TGCCC i macNem1.NW_012011978v1 C 0 C 0 s calJac3.chr14 1418852 6 - 108792865 ATGCCC i calJac3.chr14 C 0 I 321 s saiBol1.JH378218 1249157 6 - 7082604 GTGCTC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 161252 6 + 287728 GTGCTC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1342738 0 + 1864846 C e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1750501 2011 + 4416731 I e colAng1.NW_012118821v1 1414617 5640 - 13651311 M e manLeu1.NW_012103754v1 986734 0 - 2200435 C e chlSab2.chr14 1498225 0 - 107702431 C e cerAty1.NW_012000820v1 1421264 0 - 10304083 C a score=29958.000000 s hg38.chr2_KI270774v1_alt 153956 26 + 223625 TTCCCATGATCTGAAAGTTCATA--G--CA s panTro5.chr2A 1440902 26 + 111504155 TTCCCATGATCTGAAAGTTCATA--G--CA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1389956 26 + 114371477 TTCCCATGATCTGAAAGTTCATA--G--CA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1414099 26 + 1464242 TTCCCATGATCTGAAAGTTCATA--G--CA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1136911 24 + 81552678 TTCCCATGATCCTGATGCTCATG--G---- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1466315 6 + 108979918 TTCCCA------------------------ i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1438856 24 - 111193037 TTCCCATGATGCAAATGCTCATG--G---- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1466750 6 + 3644372 TTCCCA------------------------ i macNem1.NW_012011978v1 C 0 C 0 s calJac3.chr14 1419179 26 - 108792865 TTCCCATGATCTGAATGCTCATATGG---- i calJac3.chr14 I 321 C 0 s saiBol1.JH378218 1249163 24 - 7082604 TTCCTGTGATCTGAATGTTCATA--G---- i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 161258 26 + 287728 TTCCTGTGATCTGAATGTTCATA--GCA-- i aotNan1.NW_018513311v1 C 0 I 710 e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1342738 0 + 1864846 C e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1750501 2011 + 4416731 I e colAng1.NW_012118821v1 1414617 5640 - 13651311 M e manLeu1.NW_012103754v1 986734 0 - 2200435 C e chlSab2.chr14 1498225 0 - 107702431 C e cerAty1.NW_012000820v1 1421264 0 - 10304083 C a score=60379.000000 s hg38.chr2_KI270774v1_alt 153982 33 + 223625 CATGCCCTTCCCATGATCTGAATGTTCATAG--CA s panTro5.chr2A 1440928 33 + 111504155 CATGCCCTTCCCATGATCTGAATGTTCATAG--CA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1389982 33 + 114371477 CATGCCCTTCCCATGATCTGAATGTTCATAG--CA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1414125 33 + 1464242 CATGCCCTTCCCATGATCTGAAAGTTCATAG--CA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1136935 33 + 81552678 TGTGCCCTTCCCATGATCTGAAAGTTCATAT--CT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1466321 18 + 108979918 -------------TGATCTGCATGTCCATAG---- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1438880 33 - 111193037 CATGTACTTCCCGTGATCTGAATGCTCATAGAA-- i macFas5.chr13 C 0 T 155 s macNem1.NW_012011978v1 1466756 18 + 3644372 -------------TGATCTGCATGTCCATAG---- i macNem1.NW_012011978v1 C 0 C 0 s calJac3.chr14 1419205 33 - 108792865 CGTGTGGTTCCCATGATCTGAATGCTCATAT--GG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1249187 32 - 7082604 CATGCCCTT-CCATGGTCTGAATGCTCATAT--GG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 161284 710 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1342738 0 + 1864846 C e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1750501 2011 + 4416731 I e colAng1.NW_012118821v1 1414617 5640 - 13651311 M e manLeu1.NW_012103754v1 986734 0 - 2200435 C e chlSab2.chr14 1498225 0 - 107702431 C e cerAty1.NW_012000820v1 1421264 0 - 10304083 C a score=2493.000000 s hg38.chr2_KI270774v1_alt 154015 2 + 223625 CA s gorGor5.CYUI01015607v1 1414158 2 + 1464242 CA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1136968 2 + 81552678 CA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1466339 2 + 108979918 CA i rheMac8.chr13 C 0 C 0 s macNem1.NW_012011978v1 1466774 2 + 3644372 CA i macNem1.NW_012011978v1 C 0 C 0 s calJac3.chr14 1419238 2 - 108792865 CG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1249219 2 - 7082604 TA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 161284 710 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1342738 0 + 1864846 C e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1750501 2011 + 4416731 I e colAng1.NW_012118821v1 1414617 5640 - 13651311 M e manLeu1.NW_012103754v1 986734 0 - 2200435 C e chlSab2.chr14 1498225 0 - 107702431 C e cerAty1.NW_012000820v1 1421264 0 - 10304083 C e macFas5.chr13 1438913 155 - 111193037 T e panPan2.chr2A 1390015 0 + 114371477 C e panTro5.chr2A 1440961 0 + 111504155 C a score=8633.000000 s hg38.chr2_KI270774v1_alt 154017 3 + 223625 TGC s gorGor5.CYUI01015607v1 1414160 3 + 1464242 TGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1136970 3 + 81552678 TGC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1438758 3 - 111193037 TGC i macFas5.chr13 T 155 C 0 s cerAty1.NW_012000820v1 1421264 3 - 10304083 TGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1498225 3 - 107702431 TGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 986734 3 - 2200435 TGC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1419240 3 - 108792865 TGT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1249221 3 - 7082604 TGT i saiBol1.JH378218 C 0 T 125 e aotNan1.NW_018513311v1 161284 710 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1342738 0 + 1864846 C e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1750501 2011 + 4416731 I e colAng1.NW_012118821v1 1414617 5640 - 13651311 M e macNem1.NW_012011978v1 1466776 0 + 3644372 C e rheMac8.chr13 1466341 0 + 108979918 C e panPan2.chr2A 1390015 0 + 114371477 C e panTro5.chr2A 1440961 0 + 111504155 C a score=76036.000000 s hg38.chr2_KI270774v1_alt 154020 39 + 223625 CCTTCCCATGATCTGAATGTTCATA--GCATACCCATCCCA s panTro5.chr2A 1440961 11 + 111504155 ------------------------------TACCCATCCCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1390015 11 + 114371477 ------------------------------TATCCATCCCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1414163 39 + 1464242 CCTTCCCATGATCTGAATGTTCATA--GCATACCCATCCCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1136973 39 + 81552678 CCTTCCCGTGATCTGAATGTTCATA--GCATACTCATCTCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1466341 11 + 108979918 ------------------------------TGCCCTTCCCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1438761 39 - 111193037 CCTTCCCATGATCTGCATGTCCATA--GCATGCCCTTCCCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1466776 11 + 3644372 ------------------------------TGCCCTTCCCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1421267 33 - 10304083 CCTTCCCATGATCTGCATGTCCATA--GCATGCCC------ i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1498228 39 - 107702431 CCTTACCACGATCTGCATGTTCATA--GCATGCCCTTCCCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 986737 39 - 2200435 CCTTCCCATGATCTGCATGTCCATA--GCATGCCCTTCCCA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1419243 41 - 108792865 GGTTCCCATGATCTGAATGCTCATATGGCGTGTGGTTCCCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1249099 39 - 7082604 CCTTCCCATGATCTGAATGTTCCTA--GCGTGCCCTTCCCA i saiBol1.JH378218 T 125 C 0 e aotNan1.NW_018513311v1 161284 710 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1342738 0 + 1864846 C e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1750501 2011 + 4416731 I e colAng1.NW_012118821v1 1414617 5640 - 13651311 M a score=315483.000000 s hg38.chr2_KI270774v1_alt 154059 46 + 223625 TTCTTTGAGTGCTCATA--GTATGTTCTTCCTGTGATCTGAGTGCTGA s panTro5.chr2A 1440972 46 + 111504155 TTCTTTGAGTGCTCATA--GTATGTTCTTCCTGTGATCTGAGTGCTGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1390026 46 + 114371477 TTCTTTGAGTGCTCATA--GTATGTTCTTCCTGTGATCTGAGTGCTGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1414202 46 + 1464242 TTCTTTGAGTGCTCATA--GTATGTTCTTCCTGTGATCTGAGTGCTGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1137012 46 + 81552678 TTCTTTGCGTGCTCATA--GTATGCTCTTCCTGTGATCTGAGTGCTGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1466352 46 + 108979918 TTATTTGAGTGCTCATG--GTATGCTCTTCCTGTGATCTCAATGCTGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1438800 46 - 111193037 TTATTTGAGTGCTCATG--GTATGCTCTTCCTGTGATCTCAATGCTGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1466787 46 + 3644372 TTATTTGAGTGCTCATG--GTATGCTCTTCCTGTGATCTCAATGCTGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1421300 46 - 10304083 TTATTTGAGTGCTCATG--GTATGCTCTTCCTGTGATCTCAATGCTGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1498267 46 - 107702431 TTATTTGAGTGCTCATG--GTATGCTCTTCCTGTGATCTCAATGCTGA i chlSab2.chr14 C 0 I 187 s manLeu1.NW_012103754v1 986776 46 - 2200435 TTATTTGAGTGCTCATG--GTATGCTCTTCCTGTGATCTCAATGCTGA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1419284 48 - 108792865 TGATCTGAATGCTCATATGGCGTGTGGTTCCCATGATCTGAATGCTCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1249138 46 - 7082604 TTCTTTGAGTGCTCATA--GTGTGCTCTTCCTGTGATCTGAATGTTCA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1342738 46 + 1864846 TTCTTTGAGTGCTAATA--GTGTGCTCTTCCTGTGATCTGAATGTTCA i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 161284 710 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1750501 2011 + 4416731 I e colAng1.NW_012118821v1 1414617 5640 - 13651311 M a score=59710.000000 s hg38.chr2_KI270774v1_alt 154105 10 + 223625 TA--TCATGCCC s panTro5.chr2A 1441018 10 + 111504155 TA--TCATGCCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1390072 10 + 114371477 TA--TCATGCCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1414248 10 + 1464242 TA--TCATGCCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1137058 10 + 81552678 TA--TCATGCCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1466398 10 + 108979918 TA--TGATGCCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1438846 10 - 111193037 TA--TCGTGCCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1466833 10 + 3644372 TA--TCGTGCCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1421346 10 - 10304083 TA--TCATGCCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1498500 10 - 107702431 TA--TCATGCCC i chlSab2.chr14 I 187 C 0 s manLeu1.NW_012103754v1 986822 10 - 2200435 TA--TCATGCCC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1419332 12 - 108792865 TATGGCGTGTGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1249184 10 - 7082604 TA--GCATGCCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1342784 10 + 1864846 TA--GCATGCCC i cebCap1.NW_016107827v1 C 0 I 516 e aotNan1.NW_018513311v1 161284 710 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1750501 2011 + 4416731 I e colAng1.NW_012118821v1 1414617 5640 - 13651311 M a score=141254.000000 s hg38.chr2_KI270774v1_alt 154115 23 + 223625 TTCCCATGATGCAAATGCTCACA s panTro5.chr2A 1441028 23 + 111504155 TTCCCATGATGCAAATGCTCACA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1390082 23 + 114371477 TTCCCATGATGCAAATGCTCACA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1414258 23 + 1464242 TTCCCATGATGCAAATGCTCACA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1137068 23 + 81552678 TTCCCATGATGCAAATGCTCACA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1466408 23 + 108979918 TTCCCATGATGCAAATGCTCATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1438856 23 - 111193037 TTCCCATGATGCAAATGCTCATG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1466843 23 + 3644372 TTCCCATGATGCAAATGCTCATG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1421356 23 - 10304083 TTCCCATGATGCAAATGCTCATG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1498510 23 - 107702431 TTCCCATGATGCAAATGCTCACG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 986832 23 - 2200435 TTCCCATGATGCAAATGCTCATG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1419344 23 - 108792865 TTCCCATGATCTGAATGCTCATA i calJac3.chr14 C 0 I 362 s saiBol1.JH378218 1249194 22 - 7082604 TT-CCATGGTCTGAATGCTCATA i saiBol1.JH378218 C 0 I 2 e aotNan1.NW_018513311v1 161284 710 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1342794 516 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1750501 2011 + 4416731 I e colAng1.NW_012118821v1 1414617 5640 - 13651311 M a score=1077023.000000 s hg38.chr2_KI270774v1_alt 154138 187 + 223625 GCATGCACTTCCTGTGATCTGAACGCTCATAGA--GTGCTCTTCCTGTGATCCAAATGCTCATG--GCATGCCCTTTCCATGACGTGAATGCTC--ATGGCGTGCCCCTCCTGTGTTCTGAATGCT--TATAGAGTGCCCTTCACATGATCTGAGTGCTCAT--GGTGTGTCCTTTCTGTGATCCAAATACTCATGC-- s panTro5.chr2A 1441051 187 + 111504155 GCATGCACTTCCTGTGATCTGAACGCTCATAGA--GTGCTCTTCCTGTGATCCAAATGCTCATG--GCATGCCCTTTCCATGACCTGAATGCTC--ATGGTGTGCCCCTCCTGTGTTCTGAATGCT--TATAGAGTGCCCTTCACATGATCTGAGTGCTCAT--GGTGTGTCCTTTCTGTGATCCAAATACTCATGC-- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1390105 187 + 114371477 GCATGCACTTCCTGTGATCTGAACGCTCATAGA--GTGCTCTTCCTGTGATCCAAATGCTCATG--GCATGCCCTTTCCATGACCTGAATGCTC--ATGGTGTGCCCCTCCTGTGTTCTGAATGCT--TATAGAGTGCCCTTCACATGATCTGAGTGCTCAT--GGTGTGTCCTTTCTGTGATCCAAATACTCATGC-- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1414281 187 + 1464242 GCATGCACTTCCTGTGATCTGAACGCTCATAGA--GTGCTCTTCCTGTGATCCAAATGCTCATG--GCATGCCCTTTCCATGACCTGAATGCTC--ATGGCGTGCCCCTCCTGTGTTCTGAATGCT--TATAGAGTGCCCTTCACATGATCTGAGTGCTCAT--GGTATGTCCTTTCTGTGATCCAAATACTCATGC-- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1137091 187 + 81552678 GCATGCACTTCCTGTGATCTGAATGCTCATAGA--GTGCCCTTCCTGTGATCCAAatgctcatg--gcatgccatttccatgacctgaatgctc--atggcattccCTTCCTGTGTTCTGAATGCT--TATAGAGTGCCCTTCACATGATCTCAGTGCTCAT--GGTGTGCCCTTTCTGTGATCCAAATACTCATGC-- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1466431 186 + 108979918 GCATGTACTTCCCGTGATCTGAATGCTCATAGA--ATGCCCCTCCTGTGATCCAAATGCTCATG--GCATGCCCTTTCCATGACCTGAATGCCC--ACGGCGTGCCCTTCCTGTGTTCTGAATGCT--GATGGAGTGCCCTTCACATGATCTGAGTGCTCAT---GTGTGCCCTTTCTGTGATCCAAATACTCATGC-- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1438879 186 - 111193037 GCATGTACTTCCCGTGATCTGAATGCTCATAGA--ATGCCCCTCCTATGATCCAAATGCTCATG--GCATGCCCTTTCCATGACCTGAATGCCC--ACGGCGTGCCCTTCCTGTGTTCTGAATGCT--GATGGAGTGCCCTTCACATGATCTGAGTGCTCAT---GTGTGCCCTTTCTGTGATCCAAATACTCATGC-- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1466866 186 + 3644372 GCATGTACTTCCCGTGATCTGAATGCTCATAGA--ATGCCCCTCCTATGATCCAAATGCTCATG--GCATGCCCTTTCCATGACCTGAATGCCC--ACGGCGTGCCCTTCCTGTGTTCTGAATGCT--GATGGAGTGCCCTTCACATGATCTGAGTGCTCAT---GTGTGCCCTTTCTGTGATCCAAATACTCATGC-- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1421379 186 - 10304083 GCATGTACTTCCCGTGATCTGAATGCTCATAGA--ATGCCCCTCCTGTGATCCAAATGCTCATG--GCATGCCCTTTCCATGACCTGAATGCCC--ACGGCGTGCTCTTCCTGTGTTCTGAATGCT--GATGGAGTGCCCTTCACATGATCTGAGTGCTCAT---GTGTGCCCTTTCTGTGATCCAAATACTCATGC-- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1498533 186 - 107702431 GCATGTACTTCCCGTGATCTGAACGCTCATAGA--ATGCCCCTCCTGTGATCCAAACGCTCATG--GCGTGCCCTTTCCATGACCTGAATGCCC--GCGGCGTGCCCTTCCTGTGTTCTGAATGCT--GATGGAGTGCCCTTCACATGATCTGAGTGCTCAT---GTGTGCCCTTTCTGTGATCCAAATACTCATGC-- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 986855 186 - 2200435 GCATGTACTTCCCATGATCTGAATGCTCATAGA--ATGCCCCTCCTGTGATCCAAATGCTCATG--GCATGCCCTTTCCATGACCTGAATGCCC--ACGGCGTGCTCTTCCTGTGTTCTGAATGCT--GATGGAGTGCCCTTCACATGATCTGAGTGCTCAT---GTGTGCCCTTTCTGTGATCCAAATACTCATGC-- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1419729 199 - 108792865 GCGTGTGGTTCCCATGATCTGAATGCTCATATGGCGTGTGGTTCCCATGATCTGAATGCTCATATGGCGTGTGGTTCCCATGATCTGAATGCTCATATGGCGTGTGGTTCCCATGATCTGAATGCTCATATGGGGTGTGGTTCCCATGATCTGAATGCTCATATGGCGTGTCGTTCCCATGATCTGAATGCTCAGATGG i calJac3.chr14 I 362 C 0 s saiBol1.JH378218 1249218 194 - 7082604 GTATGTTGTTCCCATGACCTGAATGCTCATAG---TTGCCCCTCCCATGATACAGATGTTCACA--GCATTCCCTGCCCATGACCTGAATGCTCATATGGTGTGTTGTTCCCGTGACCTGAGTGCTCATATGGTGCGTGGTTCCCATGACCTGAGTGCTCATATGGCATGTCGTTCCCGTGACCTGAGTGCTCATATGG i saiBol1.JH378218 I 2 C 0 e aotNan1.NW_018513311v1 161284 710 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1342794 516 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1750501 2011 + 4416731 I e colAng1.NW_012118821v1 1414617 5640 - 13651311 M a score=28099.000000 s hg38.chr2_KI270774v1_alt 154325 4 + 223625 TATG s panTro5.chr2A 1441238 4 + 111504155 TATG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1390292 4 + 114371477 TATG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1414468 4 + 1464242 TATG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1137278 4 + 81552678 TATG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1466617 4 + 108979918 TATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1439065 4 - 111193037 TATG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1467052 4 + 3644372 TATG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1421565 4 - 10304083 TATG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1498719 4 - 107702431 TATC i chlSab2.chr14 C 0 I 185 s manLeu1.NW_012103754v1 987041 4 - 2200435 TATG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1419928 4 - 108792865 CATG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1249412 4 - 7082604 CATG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1343310 4 + 1864846 TATG i cebCap1.NW_016107827v1 I 516 C 0 e aotNan1.NW_018513311v1 161284 710 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1750501 2011 + 4416731 I e colAng1.NW_012118821v1 1414617 5640 - 13651311 M a score=513799.000000 s hg38.chr2_KI270774v1_alt 154329 80 + 223625 TCCTTCCCTTGATCCAAATGCTCATGGTGTGTCCTTCTGATGATCTGAGTGCTCATAGTGTGCTCTTCCCACGATATGAG s panTro5.chr2A 1441242 80 + 111504155 TCCTTCCATTGATCCAAATGCTCATGGTGTGTCCTTCTGATGATCTGAGTGCTCATAGTGTGCTCTTCCCACGATATGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1390296 80 + 114371477 TCCTTCCATTGATCCAAATGCTCATGGTGTGTCCTTCTGATGATCTGAGTGCTCATAGTGTGCTCTTCCCACGATATGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1414472 80 + 1464242 TCCTTCCCTTGATCCAAATGCTCATGGTGTGTCCTTCTGATGATCTGAGTGCTCATAGTGTGCTCTTCCCACGATATGAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1137282 80 + 81552678 TCCTTCCCTTGATCCAAATGCTCATGGTGTGTCCTTCTGATGATCTGAGTACTCATAGTGTGCTTTTCCCACGATATGAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1466621 80 + 108979918 TCCTTCCCGTGACCCAAATGCTCGTGGCGTGTCCTTCTGATGATCTGAGTGCTCATCGCGTGCTCCTCCCGTGATATGAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1439069 80 - 111193037 TCCTTCCCGTGACCCAAATGCTCGTGGCGTTTCCTTCTGATGATCTGAGTACTCATCGCGTGCTCCTCCCGTGATATGAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1467056 80 + 3644372 TCCTTCCCGTGACCCAAATGCTCGTGGCGTTTCCTTCTGATGATCTGAGTACTCATCGCGTGCTCCTCCCGTGATATGAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1421569 80 - 10304083 TCCTTCCCGTGACCCAAATGCTCGTGGCGTGTCCTTCTGATGATCTGAGTGCTCATCGCATGCACTTCCCCTGATATGAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1498908 80 - 107702431 TCCTTCCCGTGACCCAAATGCTCATGGCGTGTCCTTCTGATGATCTGAGTGCTCATCGCGTGCTCCTCCCGTGATATGAG i chlSab2.chr14 I 185 C 0 s manLeu1.NW_012103754v1 987045 80 - 2200435 TCCTTCCCGTGACCCAAATGCTCGTGGCGTGTCCTTCTGATGATCTGAGTGCTCATCGCATGCTCTTCCCGTGATATGAG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1419932 79 - 108792865 TCGTTCCCATGATCTGAATGCTCACAGCATGCCCTCTCCATGATCTGAGT-CTCATAGCGTGCTCTCCCTGTGCTCTGAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1249416 79 - 7082604 TCGTTCCCATGACCTGAGTGCTCATAGTGTGCCCTTCCCGTGATCTGAGT-CTCGTAGCCTGCTCTCCCTGTGATCTGAC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1343314 79 + 1864846 TCGTTCTCATGATCTGAATGCTCATAGTGTGTCCTTCCCATGATCTGAGT-CTCATAGCCTGCTCTCCCTGTGATCTAAC i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 161284 710 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1750501 2011 + 4416731 I e colAng1.NW_012118821v1 1414617 5640 - 13651311 M a score=63471.000000 s hg38.chr2_KI270774v1_alt 154409 8 + 223625 TGGTCACG s panTro5.chr2A 1441322 8 + 111504155 TGGTCACA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1390376 8 + 114371477 TGGTCACA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1414552 8 + 1464242 TGGTCACG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1137362 8 + 81552678 TGGTCATG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1466701 8 + 108979918 TGGTCATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1439149 8 - 111193037 TGGTCATG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1467136 8 + 3644372 TGGTCATG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1421649 8 - 10304083 TGGTCATG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1498988 8 - 107702431 TGGTCATG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 987125 8 - 2200435 TGGTCATG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1420011 8 - 108792865 TGGTCATG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1249495 8 - 7082604 TGCTTGTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1343393 8 + 1864846 TGGTCATA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 161994 8 + 287728 TGGTCATG i aotNan1.NW_018513311v1 I 710 C 0 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1750501 2011 + 4416731 I e colAng1.NW_012118821v1 1414617 5640 - 13651311 M a score=178218.000000 s hg38.chr2_KI270774v1_alt 154417 18 + 223625 GTGTGCCCTTTCCATGAT s panTro5.chr2A 1441330 18 + 111504155 GTGTGCCCTTTCCATGAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1390384 18 + 114371477 GTGTGCCCTTTCCATGAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1414560 18 + 1464242 GTGTGCCCTTTCCATGAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1137370 18 + 81552678 GTGTGCCCTTTCCATGAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1466709 18 + 108979918 GTGTGCCCTTTCCATGAT i rheMac8.chr13 C 0 I 1 s macFas5.chr13 1439157 18 - 111193037 GTGTGCCCTTTCCATGAT i macFas5.chr13 C 0 I 1 s macNem1.NW_012011978v1 1467144 18 + 3644372 GTGTGCCCTTTCCATGAT i macNem1.NW_012011978v1 C 0 I 1 s cerAty1.NW_012000820v1 1421657 18 - 10304083 GTGTGCCCTTTCCATGAT i cerAty1.NW_012000820v1 C 0 I 1 s chlSab2.chr14 1498996 18 - 107702431 GTGTGCCCTTTCCACGAT i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012103754v1 987133 18 - 2200435 GTGTGCCCTTTCCATGAT i manLeu1.NW_012103754v1 C 0 I 1 s calJac3.chr14 1420019 18 - 108792865 GTGTGCCCTTTCCGTGTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1249503 18 - 7082604 GGGTGCCCTTTCCGTGAT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1343401 18 + 1864846 GTGTGCCCTTTCCGTGAT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 162002 18 + 287728 GTGTGCCCTTTCCGTGAT i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1752512 18 + 4416731 GTGTATCCTTCATATTAT i dasNov3.JH576208 I 2011 C 0 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e colAng1.NW_012118821v1 1414617 5640 - 13651311 M a score=-1840.000000 s hg38.chr2_KI270774v1_alt 154435 1 + 223625 -A s panTro5.chr2A 1441348 1 + 111504155 -A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1390402 1 + 114371477 -A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1414578 1 + 1464242 -A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1137388 1 + 81552678 -A i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1420037 1 - 108792865 -A i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1249521 1 - 7082604 -G i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1343419 1 + 1864846 -A i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 162020 1 + 287728 -A i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1752530 1 + 4416731 C- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e colAng1.NW_012118821v1 1414617 5640 - 13651311 M e manLeu1.NW_012103754v1 987151 1 - 2200435 I e chlSab2.chr14 1499014 1 - 107702431 I e cerAty1.NW_012000820v1 1421675 1 - 10304083 I e macNem1.NW_012011978v1 1467162 1 + 3644372 I e macFas5.chr13 1439175 1 - 111193037 I e rheMac8.chr13 1466727 1 + 108979918 I a score=4252267.000000 s hg38.chr2_KI270774v1_alt 154436 577 + 223625 TGAATGCTCACTTGGCTACACCTAAAGAAGT-CATGCACAAGCATATTCTCTTGAATGTTGTTAACAAAAACAAGACTATGCTGAGTACACGTTCTGTATCTTGGATTCT-CACTCAGTAGTGATGTGTCCTGGGAATC--------CCCCCAGTGGAGCGCCAAG-CCATCCCTGCTTA-------CGGCTGGACTGTT----CCACACTCCGGGTCACAGCCATGGGTG------------TGCCCTTCCGTGTTACAGCCTC--TGCCACAGCGTGGATCACCAGAAGTGACACTGCCAGGTTGGAAGGCAGCTTTAGCACTGCTATGCTG--GTACT--ACTGTCTAAAAATTCTGTGA--CCCTCACAGCAACGACTGAGTGTACCCCTTACTCACATTCGCCATCCACACTGGCAACAGCCTT----GTTT-TTTTCTCA----TTTTTTTCTGCTTGTTTGGCGGCaaaaaaaaaaaaaaaaaaaaaaaaGGAGAGAGAGAgatatttcgttgttacattag-ttgctttccctgaatattagtgaattttaaagttgtcctttatttat-cttttttt-ggcaatttgtatttgttcaacgaatgatctgttcatagcctttg s panTro5.chr2A 1441349 566 + 111504155 TGAATGCTCACTCGGCTACACCTAAAGAAGT-CATGCACAAGCATATTCTCTTGAATGTTGTTAATAAAAACAAGACTATGCTGAGTACACGTTCTGTATCTTGGATTCT-CACTCAGTAGTGATGCGTCCTGGAAATC--------CCCCCAGTGGAGTGCCAAG-CCATCCCTGCTTA-------CGGCTGGACTGTT----CCACACTCTGGGTCACAGCCATGGGTG------------TGCCCTTCTGTGTTGCAGCCTC--TGCCACAGCGTGGATCACCAGAAGTGACACTGCCAGGTTGGAAGGCAGCTTTAGCACTGCTGTGCTG--GTACT--ACTGTCTAAAAATTCTGTGA--CCCTCACAGCAACGACTGAGTGTACCCCTTACCCACATTCGCCATCCACACTAGCAACAGGCTTAATTGTTT-TTTTCTCA----TTTTTTTCTGCTTGTTTGGTGGCAAAAAAAAAAA----------------GAGAGAGAGAGatttcgttgttacattag-ttgctttccctgaatgttagtgaattttaaagttgtcctttatttat-cttttttttggcaatttgtatttgttcaacgaatgatctgttcatagcctttg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1390403 563 + 114371477 TGAATGCTCACTCGGCTACACCTAAAGAAGT-CATGCACAAGCATATTCTCTTGAATGTTGTTAATAAAAACAAGACTATGCTGAGTACACGTTCTGTATCTTGGATTCT-CACTCAGTAGTGATGCGTCCTGGAAATC--------CCCCCAGTGGAGTGCCAAG-CCATCCCTGCTTA-------CGGCTGGACTGTT----CCACACTCCGGGTCACAGCCATGGGTG------------TGCCCTTCTGTGTTGCAGCCTC--TGCCACAGCGTGGATCACCAGAAGTGACACTGCCAGGTTGGAAGGCAGCTTTAGCACTGCTGTGCTG--GTACT--ACTGTCTAAAAATTCTGTGA--CCCTCACAGCAACGACTGAGTGTACCCCTTACCCACATTCGCCATCCACACTAGCAACAGGCTTAATTG-TT-TTTTCTCA----TTTTTTTCTGCTTGTTTGGTGG-ACAAAAAAAAA----------------GAGAGAGAGAGatttcgttgttacattag-ttgctttccctgaatgttagtgaattttaaagttgtcctttatttat-cttttttt-ggcaatttgtatttgttcaacgaatgatctgttcatagcctttg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1414579 573 + 1464242 TGAATGCTCACTTGGCTACACCTAAAGAAGT-CATGCACAAGCATATTCTCTCGAATGTTGTTAATAAAAACAAGACTATGCTGAGTACACGTTCTGTATCTTGGATTCT-CACTCAGTAGTGATGCGTCCTGGAAATC--------CCCCCAGTGGAGCGCCAAG-CCATCCCTGCTTA-------CGGCTGGACTGTT----CCACACTCCGGGTCACAGCCATGGGTG------------TGCCCTTCCGTGTTGCAGCCTC--TGCCACAGCGTGGATCACCAGAAGTGACACTGCCAGGTTGGAAGGCAGCTTTAGCACTGCTGTGCTG--GTACT--ACTGTCTAAAAATTCTGTGA--CCCTCACAGCAACGACTGAGTGTACCCCTTACCCACATTCGCCATCCACACTAGCAACAGCCTTAATTGTTT-TTTTCTCA----TTTTTTTCTGCTTGTTTGGCGGCaaaaaaaaaaa-------aaaaaagaaGAGAGAGAGAGatttcgttgttacattag-ttgctttccctgaatgttagtgaattttaaagttgtcctttatttat-ctttttt--ggcaatttgtatttgttcaacaaatgatctgttcatagcctttg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1137389 558 + 81552678 TGAATGCTCACTCGGCTACACCTAAAGAAGT-CATGCACAAGCATTTTCTCTTGAATGCTGTTAACATAAACAAGACTATGCTGAGTACACGTTCTGTATCTTGGATTCT-CACTCAGTAGTGATGCGTCCTGGAAATT--------CCCCCAATGGAGCTCCAAG-TCCTCCCTGCTCA-------CGGCTGGACTGTT----CCACACTCCGGGTCACAGCCATGGGTG------------TGCCCTTCTGTGTTGCAGCCTC--TGCCACAATGTGGATCACCAGAAGTGACACTGCCAGGTTGGAAGGCAGCTTTAGCACTGCTGTGCTG--GTACT--ACTGTCTAAAAATCCTGTGa--ccctcacagcaacgactgagtgtaccccttacccacgttcgccatccacgctagcaacagcctt----gttt-ttttctca----tttttttctgcttgtttggcggcaaaagaaaaaa--------------------aagagatattttgttgttacattag-ttgctttccctgaatgttagtgaattttaaacttgtcctttattttt-tttttttttggcaatttgtatttgttcaacaaatgatctgttcatagcctttg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1466728 553 + 108979918 TGAATGCTCACTCGGCTACACCTAAAGAAGT-CACACACAAGCATTTTCTTTTGAATGTTGTTAATAAAAACAGGACTCTGCTGAGTACACGTTCTGTATCTTGGGTTCT-CAATCAATAGTGATACATCCTGGAAATC--------CCCCCGATGGAGCTCCGAG-CCCTCCCTGCTCA-------CGGCTGGACTGTT----CCATGCTCCAGGTCACAGCCATGGGTG------------TGCCCTTCCGTGTTGCAGCCTC--TGCCCCAGCGTGGATCACCAGAAGTGACACTGCCAGGTTGGAAGGCGGCTTTAGCACTGCTGTGCTG--GTACTAAAATGTCTAAAAATTCTGTG---CCCTCACAGCAACAACTGAGTTCACCCCTTACCCACATCCACCATCCACACTAGTAACAGCCTTAATTGTTTTTTTTCTCA----TTTTTTTCTGCTTGTTTGGCAGCAAaa---------------------------aagagatagttcattgttacattag-ttgctttccctgaatgttagtaaattttaaacttgtcctttt---at-tttttttt-ggcaatttgtatttgttcaatgaatgatctattcataacctttg i rheMac8.chr13 I 1 C 0 s macFas5.chr13 1439176 552 - 111193037 TGAATGCTCACTCGGCTACACCTAAAGAAGT-CACGCACAAGCATTTTCTTTTGAATGTTGTTAATAAAAACAGGACTCTGCTGAGTACACGTTCTGTATCTTGGGTTCT-CAATCAATAGTGATACATCCTGGAAATC--------CCCCCGATGGAGCTCCGAG-CCCTCCCTGCTCA-------CGGCTGGACTGTT----CCATGCTCCAGGTCACAGCCATGGGTG------------TGCCCTTCCGTGTTGCAGCCTC--TGCCCCAGCGTGGATCACCAGAAGTGACACTGCCAGGTTGGAAGGCGGCTTTAGCACTGCTGTGCTG--GTACTAAAATGTCTAAAAATTCTGTG---CCCTCACAGCAACAACTGAGTTCACCCCTTACCCACATCCTCCATCCACACTAGTAACAGCCTTAATTGTTTTTTTTCTCA----TTTTTTTCTGCTTGTTTGGCAGCAAaa---------------------------aagagatagttcattgttacattag-ttgctttccctgaatgttagtaaattttaaacttgtcctttt----t-tttttttt-ggcaatttgtatttgttcaatgaatgatctattcataacctttg i macFas5.chr13 I 1 C 0 s macNem1.NW_012011978v1 1467163 552 + 3644372 TGAATGCTCACTCGGCTACACCTAAAGAAGT-CACGCACAAGCATTTTCTTTTGAATGTTGTTAATAAAAACAGGACTCTGCTGAGTACACGTTCTGTATCTTGGGTTCT-CAATCAATAGTGATGCATCCTGGAAATC--------CCCCCGATGGAGCTCCGAG-CCCTCCCTGCTCA-------CGGCTGGACTGTT----CCATGCTCCAGGTCACAGCCATGGGTG------------TGCCCTTCCGTGTTGCAGCCTC--TGCCCCAGCGTGGATCACCAGAAGTGACACTGCCAGGTTGGAAGGCGGCTTTAGCACTGCTGTGCTG--GTACTAAAATGTCTAAAAATTCTGTG---CCCTCACAGCAACAACTGAGTTCACCCCTTACCCACATCCTCCATCCACACTAGTAACATCCTTAATTGTTTTTTTTCTCA----TTTTTTTCTGCTTGTTTGGCAGCAAaa---------------------------aagagatagttcattgttacattag-ttgctttccctgaatgttagtaaattttaaacttgtcctttt----t-tttttttt-ggcaatttgtatttgttcaatgaatgatctattcataacctttg i macNem1.NW_012011978v1 I 1 C 0 s cerAty1.NW_012000820v1 1421676 551 - 10304083 TGAATGCTCACTCGGCTACACCTAAAGAAGT-CACGCACAAGCATTTTCTTTTGAATGTTGTTAATAAAAACAGGACTCTGCTGAGTACACGTTCTGCATCTTGGGTTCT-CAATCAATAGTGATGCATCCTGGAAATC--------CCCCCGATGGAGCTCCAAG-CCCTCCCTGCTCA-------CGGCTGGACTGTT----CCATGCTCCAGGTCACAGCCATGGATG------------TGCCCTTCCGTGTTGCAGCCTC--CGCCCCAGCGTGGATCACCAAAAGTGACACTGCCAGGTTGGAAGGCGGCTTTAGCACTGCTGTGCTG--GTACT--ACTGTCTAAAAATTCCGTG---CCCTCACAGCAACAACTGAGTGCACCCCTTACCCATATCCACCGTCCACACTAGTAACAGCCTTAATTGTTTTTTTCCTCA----TTTTtttctgcttgtttggcagcaaaa---------------------------aagagatagttcgttgttacattag-ttgctttccctgaatgttagtaaattttaaacttgtccttta---tt-tttttttt-ggcaatttgcatttgttcaatgaatgatctattcataacctttg i cerAty1.NW_012000820v1 I 1 C 0 s chlSab2.chr14 1499015 553 - 107702431 TGAATGCTCACTCGGCTACACCTAAAGAAGT-CACGCACAAGCATTTTCTTTTGAATGTTGTTAATAAAAACAGGACTCTGCTGAGTACACGTTCTGTATCTTGGGTTCT-CAATCAATAGTGATGCATCCTGGAAATC--------CCCCCGATGGAGCTCCAAG-CCCTCCCTGCTCA-------CGGCTGGACTGTT----CCATGCTCCAGGTCACAGCCATGGGTG------------TGCCCTTCTGTACTGCAGCCTC--TGCCACAGCGTGGATCACCAGAAGTGACACTGCCAGGTTGGAAGGCGGCTTTGGCACTGCTGTGCTG--GTACT--ACTGTCTAAAaattctgtg---ccctcacagcaacaactgagtgcaccccttacccgcatccaccgtccacactagtaacagccttagttgttt-ttttctca----tttttttctgcttgtttggcagcaaaa---------------------------aagagatagttcgttgttacattag-ttgctttccctgaatgttagtaaattttaaacttgtcctttattatt-tttttttt-ggcaatttgtatttgttcaatgaatgatttattcataacctttg i chlSab2.chr14 I 1 I 161 s manLeu1.NW_012103754v1 987152 555 - 2200435 TGAATGCTCACTTGGCTACACCTAAAGAAGT-CACGCACAAGCATTTTCTTTTGAATGTTGTTAATAAAAACAGGACTATGCTGAGTACACGTTCTGTATCTTGGGTTCT-CAATCAATAGTGATGCATCCTGGAAATC--------CCCCTGATGGAGCTCCAAG-CCCTCCCTGCTCA-------CGGCTGGACTGTT----CCATGCTCCAGGTCACAGCCATGGGTG------------TGCCCTTCCGTGTTGCAGCCTC--TGCCCCAGCGTGGATCACCAGAAGTGACACTGCCAGGTTGGAAGGCGGCTTTAGCACTGCTGTGCTG--GTACT--ACTGTCTAAAAATTCCGTG---CCCTCACAGCAACAACTGAGTGCACCCCTTACCCACATCCACCGTCCACACTAGTAACAGCCTTAATTGTTTCTTTTCTCA----TTTTTTTCTGCTTGTTTGGCAGCAAAA---------------------------AAGAGATAGTTCGTTGTTACATTAG-TTGCTTTCCCTGAATGTTAGTAAATTTTAAACTTGTCCTTTATTATTATTTTTTTT-TGCAATTTGTATTTGTTCAATGAATGATCTATTCATAACCTTTG i manLeu1.NW_012103754v1 I 1 C 0 s calJac3.chr14 1420038 524 - 108792865 TGAATGCACGCTCAGCTACACATGAAGAAGT-CATGCACAAGCATTT--TCTCGAATGTTGTGAACAAAATCGAGACTATGCTGAGTGCACTTTCTGTATCTTGGATTCT-CACTCAGTAGTGCTGCATCCGGGAAAT---------CCCCCCGTGGAGCTCCAAGCCCCTCCCTGCTCA-------CAGCTGGACTGTT----CTGTGCTCTGGGTCACAGCCGTGGGAG------------AGCCCTTCCGTGTTGCAGCCTC--TACCACAGCGCGGATCAGCAGAAGTGACAGTGCCAGGCTGGAAGGCAGCTTTAGGACTGCTGTGCTT--GCACT--A------AAGAATTCTGTGA--CCCT--CAGCAAAGACTCAGCGCACTCCTTACC--------CCATCCACACTCGCAACAGCCTTAATTGGCT-TTTTCTCA---TTGTTTTCCtgcttgtttggtggcaaaa----------------------------agcaacatttcattgttacattag-ttg-----cctgaatgtgagtgaactttaaacttgtcct-------t-tttttttt-ggcaatttgtgtttgttcgatgaatgatctattcccagccattg i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1249522 523 - 7082604 TGAACGCAAGCTCAGCTACACCTAAAAAAGC-CATGTGCAAGCATTTTCTCTCGAATGTTGTTAACAGAA-CGAGCCTATGCTGAGGACACTTTCCGTATCTTGGATTCT-CACTCGGTAGTGCTGCATCCTGGAAAT----------CCCCTGTGGGGCTCCAGG-CCCTCCCTGCTCC-------CAGCTGGACTGTT----CCACGCTCTGGGTCCTAGGCATGGGCG------------TGCCCTTCCGTGTTGCAGCCTC--TGCCACAGCGTGGATCAGCAGAAGTGACGCTGCCAGGCTGGAAGGCAGCTTTAGCACTGCTGTGCTG--GCACC--A------AAGaattctatga--tcctcacagcagtgactccgcacgctccttacc--------cc-tccacactcgcaacagccttaatggaat-ttttctca--tttatttttctgcttgtttgtcggcaaaa----------------------------agagacatttcattgttacattag-ttg-----cctgaatgttcgtgaactttaaacttgtcc----------attttttt-ggcaatttgtgtttgttcaatgaatgatctattcccagcctttg i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1343420 523 + 1864846 TGAATGCACGCTCAGCTACATCTAAAGAAGC-CATGCATAAGCATTTTCTCTTGAATGTTGTTAACAAAA-CAAGACTAAG-TGAGGCCACTTTCTGTATCTTGGATTCT-CACTCAGTAGTGCTGCATCCTGGAAAT----------CCCCCATGGAGCTCCAAG-CCCTCCCTGCTCA-------CAGCTGGACAGTT----CCACGCTCTGGGTCATAGCCATGGGCG------------TCCCCTTCCGTGTTGCAGCCTC--TACCACAGCGTGGATCAGCAGAAGTGACACTGCCAGGCTGGAAGGCAGCTTTAACACTGCTGTGCTG--GCACT--A------AAGAATTCTGTGA--CCCTCACAGCAATGACTCCGCACGCTCCTTACC--------CCATCCACACTCGCAACAGCGTTAATTGGCT-TTTTCTCA--TTTTTTTTTCTGCTTGTTTGGTGGCAAAA----------------------------AGCGACATTTCATTCTTACATTAG-TTG-----CCTGAATGTTACTGAACTTTAAACTTGTCC----------TTTTTTTT-GGCAATTTGTGTTTGTTCAATGAATGATCTATTCCCAGTCTTTG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 162021 527 + 287728 TGAACGCACGCTCAGCAACACCTAAA-AAGT-CATGCACAAGCATTTTCTCTTGAATGTTGTTAACAAAAACGAGACTATGCTGAGTAAACGTTTTGTATCTTGGATTCT-CACTCAGTAGTGCTGCATCCTGGACAT---------CGCCCCGTGGAGCTCCAAG-CCCTCCCCGCTCA-------CAGCTGGACTGTT----CCGCGCTCTGGGTCATAGCCATGGGCG------------TGCCCTT-CGTGTTGCAGCCTC--TACCACAGCGTGGATCAGCAGAAGTGACACTGCCAGGCCCGAAGGCAGCTTTAGCACTGCTGTGCTG--GTACT--A------AAGAATTCTGTGa--ccctcacagcaatgactcagcacactccttacc--------ccacccacactcgcaacagccttaattggct-ttttctcatttttttttttctgcttgtttggtggcaaaa----------------------------agcaacatttcattgttacattag-ttg-----cctgaatgttagtgaactttaaacttgtct--------t-tttttttt-ggcaatttgtgtttgttcaatgaatgatctattcccagcctttg i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1752531 533 + 4416731 TCCATGCTCATACAGCTACACATAAAGAAACACAACCACGGGTAAATT-TTTTGAATGTT---AACAAAAACAGGATGATGTTAAACATATTTTCAGCATCTTGAATTTTGCACTCAGTA---ATACCTCATGGAAATCCTTCAAATCATCTGATATAACTCAAGG-TCCTCCTTTCTAATTTCTGCCTGATGGGTTGTTAGAATCATGTATTCAGCCTCTCTTTTGGAAGGACGTCCTCACATGCTGTTTTATGTCACTGTTttaattccatgatttacatcctcagaattgaagcacctagattgaaaggcatttttaaaa------tgctgccatatt--gctttctaatagtgctgttaacacttcatggcaatatctgaaaatatccttttccta-------catccataccaccaacaaacatattagtat-ttttccta-----atttttctgtcagtttggtggtaata----------------------------------aaattatagttacttaagtttgcatttcctG----------AAATAGAAACTTCTT---------T-ATTTTTTT-GACAGTTTGCATT--------------TTTCTTCACATCCTTTG i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e colAng1.NW_012118821v1 1414617 5640 - 13651311 M a score=2621109.000000 s hg38.chr2_KI270774v1_alt 155013 330 + 223625 tccatttttcta-----ctatttgactgtta--attgattttaattgctcc-tttccactctagatgttaaCTCTCTATCTCTCACTTTTCTTACAAATGT-TTTTCTACAGCCCCATCAATACAG-AACTGTCAGCATGAAGCACTTTCATATTTTATAAGGCCAGGTCTACTTATGTGTTGATGGCTTCTA-GGCTCAGTTTTGGTTCAGGAATCTCCTTTGCT-CGAAGT--CGACAGTGACCT-------------------------------------------------CCTGGGTGGTATTACAGCACGGGTTTCCATTCATTTTGCACAGTGGACAGTCTGGGTGCG-TTTTATTCCCATTCAGATGGAAAACCAGCTGGTTCTG s panTro5.chr2A 1441915 330 + 111504155 tccatttttcta-----ctatttgactgtta--attgattttaattgctcc-tttccactctagatgttaaCTCTCTATCTCTCACTTTTCTTACAAATGT-TTTTCTCCAGCCCCATCAATACAG-AACTGTCAGCATGAAGCACTTTCATATTTTATAAGGCCAGGTCTACTTATGCGTTGATGGCTTCTA-GGCTCAGTTTTGGTTCAGGAATCTCCTTTGCT-TGAAGT--CGACAGTGACCT-------------------------------------------------CCTGGGAGGTATTACAGCATGGGTTTCCATTCATTTTGCACAGTGGACAGTCTGGGTGCG-TTTTATTCCCATCCAGATGGAAAATCAGCTGGTTCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1390966 330 + 114371477 tccatttttcta-----ctatttgactgtta--attgattttaattgctcc-tttccacactagatgttaaCTCTCTATCTCTCACTTTTCTTACAAATGT-TTTTCTCCAGCCCCATCAATACAG-AACTGTCAGCATGAAGCACTTTCATATTTTATAAGGCCAGGTCTACTTATGCGTTGATGGCTTCTA-GGCTCAGTTTTGGTTCAGGAATCTCCTTTGCT-CGAAGT--CGACAGTGACCT-------------------------------------------------CCTGGGAGGTATTACAGCATGGGTTTCCATTCATTTTGCACAGTGGACAGTCTGGGTGCG-TTTTATTCCCATCCAGATGGAAAATCAGCTGGTTCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1415152 330 + 1464242 tccatttttcta-----ctatttgactctta--attgattttaattgctcc-tttccactctagatgttaaCTCTCTATCTCTCACTTTTCTTACAAATGT-TTTTCTCCAGCCCCATCAATACAG-AACTGTCAGCATAAAGCACTTTCATATTTTATAAGGCCAGGTCTACTTATGTGTTGATGGCTTCTA-GGCTCAGTTTTGGTTCAGGATTCTCCTTTGCT-CGAAGT--CAACAGTGACCT-------------------------------------------------CCTGGGTGGTATTACAGCATGGGTTTCCATTCATTTTGCACAGTGGACAGTCTGGGTGCG-TTTTATTCCCATCCAGATGGAAAATCAGCTGGTTCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1137947 375 + 81552678 tccatttttcta-----ctatttgactgtta--attgattttaattgctcc-tttccactctagatgttaactc----tctctcacttttcttacgaatag-ttttctccAGCCCCATCAATACAG-AACTGTCAGTATGAAGCACTTTCATATTTTATAAGGCCAGGTCTACTTATGTGTTGGTGGCTTCTA-GGCTCGGTTTTGGTTCAGGAATCTCCTTTGCT-CGAAGT--CAACAGTGAcctaaccctaaccctaaccctaaccctaaccctaaccctaaccctaaccctaCCTGGGTGGTATTGCAGCATGGGTTTCCATTCCTTTTGCACAGTGGACAGTCTGGGTGTG-TTTTATTCCCATCCAGATGGAAAACCAGCTGGTTCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1467281 325 + 108979918 tccatttttcta-----ctatttgactgtta--attgattttaattgctcc-tttccactctagatgttaaCTC----TCTCTCACTTTTCTTACAAATAT-TTTTCTCCAGCCCCATCAACCCAG-AACTCTCAGCATGGAGCACTTTTATATTTTATGAGGCCAGGTCTCCTTATGTGTTGATGGCTTCTA-GGCTCAGTTGTGGTTCAGGAATCTCCTTTGCT-CAAAGT--CAGCAGTGACCT-------------------------------------------------CCTGGGTGGGACTGCAGCACGGGTTTCCATGCATCTTGCACAGTGGACAGTC-GGGTGCG-TTTTATTCCCATCCAGATGGAAAACCAGCTGGTTCCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1439728 325 - 111193037 tccatttttcta-----ctatgtgactgtta--attgattttaattgctcc-tttccactctagatgttaaCTC----TCTCTCACTTTTCTTACAAATAT-TTTTCTCCAGCCCCATCAACCCAG-AACTCTCAGCATGGAGCACTTTTATATTTTATGAGGCCAGGTCTCCTTATGTGTTGATGGCTTCTA-GGCTCAGTTGTGGTTCAGGAATCTCCTTTGCT-CAAAGT--CAGCAGTGACCT-------------------------------------------------CCTGGGTGGGACTGCAGCACGGGTTTCCATGCATCTTGCACAGTGGACAGTC-GGGTGCG-TTTTATTCCCATCCAGATGGAAAACCAGCTGGTTCCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1467715 325 + 3644372 tccatttttcta-----ctatgtgactgtta--attgattttaattgctcc-tttccactctagatgttaaCTC----TCTCTCACTTTTCTTACAAATAT-TTTTCTCCAGCCCCATCAACCCAG-AACTCTCAGCATGGAGCACTTTTATATTTTATGAGGCCAGGTCTCCTTATGTGTTGATGGCTTCTA-GGCTCAGTTGTGGTTCAGGAATCTCCTTTGCT-CAAAGT--CAGCAGTGACCT-------------------------------------------------CCTGGGTGGGACTGCAGCACGGGTTTCCATGCATCTTGCACAGTGGACAGTC-GGGTGCG-TTTTATTCCCATCCAGATGGAAAACCAGCTGGTTCCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1422227 325 - 10304083 tccatttttcta-----ctatttgactgtta--attgattttaattgctcc-tttccactctagatgttaaCTC----TCTCTCACTTTTCTTACAAATAT-TTTTCTCCAGCCCCATCAACCCAG-AACTCTCAGCATGGAGCACTTTTATGTTTTATGAGGCCAGGTCTCCTTATGTGTTGATGGCTTCTA-GGCTCAGTTGTGGTTCAGGAATCTCCTTTGCT-CGAAGT--CAGCAGTGACCT-------------------------------------------------CCTGGGTGGGACTGCAGCACGGGTTTCCATGCATCTTGCACAGTGGACAGTC-GGGTGCG-TTTTATTCCCATCCAGATGGAAAACCAGCTGGTTCCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1499729 326 - 107702431 tccatttttcta-----ctatttgactgtta--attgattttaattgctcc-tttccactctagatgttaaCTC----TCTCTCACTTTTCTTACAAATAT-TTTTCTCCAGCCCCATCAACCCAG-AACTCTCAGCATGGAGCACTTTTATATTTTATGAGGCCAGGTCTCCTTATGTGTTGATGGCTTCTA-GGCTCAGTTGTGGTTCAGGAATCTCCTTTGCT-CAAAGT--CAGCAGTGACCT-------------------------------------------------CCTGGGTGGGACTGCAGCATGGGTTTCCATGTATCTTGCACAGTGGACAGTCGGGGTGCA-TTTTATTCCCATCCAGATGGAAAACCAGCTGGTTCCA i chlSab2.chr14 I 161 C 0 s manLeu1.NW_012103754v1 987707 325 - 2200435 TCCATTTTTCTA-----CTATTTGACTGTTA--ATTGATTTTAATTGCTCC-TTTCCACTCTAGATGTTAACTC----TCTCTCACTTTTCTTACAAATAT-TTTTCTCCAGCCCCATCAACCCAG-AACTCTCAGCATGGAGCACTTTTATATTTTATGAGGCCAGGTCTCCTTATGTGTTGATGGCTTCTA-GGCTCAGTTGTGGTTCAGGAATCTCCTTTGCT-CGAAGT--CAGCAGTGACCT-------------------------------------------------CCTGGGTGGGACTGCAGCACGGGTTTCCATGCATCTTGCACAGTGGACAGTC-GGGTGCG-TTTTGTTCCCATCCAGATGGAAAACCAGCTGGTTCCA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1420562 320 - 108792865 tccctttttcta-----ctatttgactgttacgattgatttaaattgctccttTTCCACTCCGAT--GTAACTC----TATGTC---TCTCTTACACATAT-TTTTCTCCAGCCCCATCAGTATAGTAACTGTCAGCATGAGGCACTTCAATACTTTATAAGGCCGGGTCTACTTACGTGTTGATGGCTTCTA-AGCTCAGTGTCGGTTCAGAAATCCCCTTTGCTCCCAGGT--CAAAAGTGACCT-------------------------------------------------CCTGGGTGGGATTGCAGCGCGGGTCTCCATTCATCTTGCACAGAGGACAGTAGGGGTGCG-TTTTACTCCCATCCAGACGCAAGACCAGCTA------ i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1250045 322 - 7082604 tccatttttctg-----ctatttgactgttacgatggattttaattgctccttttccactctagctgttaaCTC----CCTGTC---TCTCTTACACATAT-TTTTCTCCAGCCCCATCAATTTAGTAACTGTCAGCATGAAGCACTGTAATACTTTATAAGGCCAGGTCTACGTGTGTGTTGATGGCTTCTA-AGCTCAGTGTCGGTTCAGAAATCTCCTTCGCTCCCAGGT--CAAAAGTGACCT-------------------------------------------------CCTGGGTGGGACTGCAGCGAGTGTCTCCATTCACCTTGCACAGAGGACAGTAGGAGTGCG-TTTTACTCCCATGCAGATGCAAGACCAGCTT------ i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1343943 314 + 1864846 TCCATGTTTCTA-----CTATTTGACTGTTATGACTGATTTTAATTGCTCCTTTTCCACTCTAGATGTTAACTC----TCTGTC---TCTCTTACACATAT-TTTTCTCCAGCCCCATCAATATAGGAACTGTCAGCATGAAGC--------ACTTTATAAGGCCAGGTCTTCTTGTGTGTTGATGGCTTCTA-AGCTCAGGGTCAGTTCCAAAATCTCCTTTGCTCCCAGGT--CAAAAGTGACCT-------------------------------------------------CCTGCGTGGGACGGCAGAGCGGGTCTCCATTCATCTTGCACAGAGGACAGTAGGGGCGCG-TTTTACTCCCATGCAGATGCAAGACCAGCTA------ i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 162548 322 + 287728 tccatttttcta-----ctatttgactgttacgattgattttaattgctccttttccactctagatgttaaCCC----TCTGTC---TCTCTTACACACAT-TTTTCTCCAGCCTCATCAATATAGCCACTGTCAGCATGAAGCACTTTAATACTTTACAAGGCCAGGTCTACTTGTGTGTTGACGGCTTCTA-AGCTCAGTGTCGGTTCAGAAATCTCCTTTGCTCCCAGGT--CAGAAGTGACCT-------------------------------------------------CCTGGGTGGGATTGCAGCAAGGGTCTCCATTCATCTTGCACAGAGGACAGCAGGGGTGAG-TTTTACTCCCATCCAGATGCAAGACCAGCTA------ i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1753064 334 + 4416731 TCCATTTTTCTATTAAGCTACTTGACTGTCA------ATTTTAATTGCTA--TTTATACTACAGATATTAATTC-TTGCCTCTTGTTTTTTAAAAAAATATATCTTTTTCTGTTCCATCAATATGG-TACTTTCATCATAAAACATTTTAAATTTTTATACAGTCAAGACTATATATGTGTTAGCAGTGTCTGTGATTCAGTCTTGGTTAAGAAGTCTCCCTTGAGCCCAAATTGTAAAAGTTACCT-------------------------------------------------CCTATATAATATTGAAGGGCATATTttcatttatttgatatggtatataatgatggtgtatttttattcttattcag-tagatagacagttgttccag i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e colAng1.NW_012118821v1 1414617 5640 - 13651311 M a score=2648516.000000 s hg38.chr2_KI270774v1_alt 155343 282 + 223625 CCCTCCTTCTCCCCACAGGCCTAGATAGCactttgtcacagaagaact-------------ggggtctggttctgggctctctgtcttctt--ttattaacagattcatctgttcttgttgacaataccgtgtggacttggtcatagcggccttatagtatatcctattatctgtcaa-------------------------------------gtcaatac-cgcatcaccattcttttc--cctagtttattaaggaataaataaataatggaatttgtatcttcatataaactttaaaattaatttatctatttcaaaatg----aaaaagtactat s panTro5.chr2A 1442245 282 + 111504155 CCCTTCCTCTCCCCACAGGCCTAGATAACACTTTGTCACAGAAGAACT-------------Ggggtctggttctgggctgtctgtcttctt--ttattaacagattcatctgttcttgttgacaatactgtgtggacttggtcatagcggccttatagtatatcctattatctgtcaa-------------------------------------gtcaatac-tgcatcaccattcttttc--cctagtttattaaggaataaataaataatggaatttgtatcttcatataaactttaaaattaatttatctatttcaaaatg----aaaaagtactat i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1391296 282 + 114371477 CCCTtcctctccccacaggcctagataacactttgtcacagaagaact-------------ggggtctggttctgggctgtctgtcttctt--ttattaacagattcatctgttcttgttgacaatactgtgtggacttggtcatagcggccttatagtatatcctattatctgtcaa-------------------------------------gtcaatac-tgcatcaccattcttttc--cctagtttattaaggaataaataaataatggaatttgtatcttcatataaactttaaaattaatttatctatttcaaaatg----aaaaagtcctat i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1415482 278 + 1464242 CCCTCCTTCTCCCCACAGGCCTAGATAACACTTTGTCACAGAAGAACT-------------Ggggtctggttctgggctgtctgtcttctt--ttattaacagattcatctgttcttgttgacaatactgtgtggacttggtcatagcagccttatagtatatcctattatctgtcaa-------------------------------------gtcaatac-tgcatcaccattcttttc--cctagtttattaaggaataaataaataatggaatttgtatcttcatataaactttaaaattaatt----tatttcaaaatg----aaaaagtactat i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1138322 282 + 81552678 CCCTCCTTCTCCCCACAGGCCTAGATAATGCTTTGTCACTAGAGAACT-------------GGGGTGCGCttctgggctctctgtcttctt--ttattaacagattcatctgttcttgttgacaacactgtgtggacttggtcatagcggccttatagtatatcctattatctgtcaa-------------------------------------gtcaatac-tgcatcactattcttttc--cctagtttattaaggaataaataaataatggaatttgtgtcttcatataaactttaaaattaatttatccacttcaaaatg----aaaaagtactat i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1467606 277 + 108979918 CCCTCCTTCTCCCCATAGGCCTAGATAACGCTTTGTCACAGGAGAACT-------------GGTAtctggttctgggctctctgtcttcct--ttattaacagatgcatctattcttgttgacaatactgtgtggacttgatcatagcagccttatagtgtatcctattgtctgtcaa-------------------------------------gtcaatac-tgcatcactattcttttc--cctagttgattaagg----aatagataatggaattggtgtcttcatataaactttaaaattaatttatcc-tttcaaaatg----aaaacatactat i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1440053 277 - 111193037 CCCTCCTTCTCCCCATAGGCCTAGATAACGCTTTGTCACAGGAGAACT-------------GGTgtctggttctgggctctctgtcttcct--ttattaacagatgcatctattcttgttgacaatactgtgtggacttgatcatagcagccttatagtgtatcctattgtctgtcaa-------------------------------------gtcaatac-tgcgtcactattcttttc--cctagttgattaagg----aatagataatggaattggtgtcttcatataaactttaaaattaatttatcc-tttcaaaatg----aaaacatactat i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1468040 277 + 3644372 CCCTCCTTCTCCCCATAGGCCTAGATAACGCTTTGTCACAGGAGAACT-------------GGTgtctggttctgggctctctgtcttcct--ttattaacagatgcatctattcttgttgacaatactgtgtggacttgatcatagcagccttatagtgtatcctattgtctgtcaa-------------------------------------gtcaatac-tgcgtcactattcttttc--cctagttgattaagg----aatagataatggaattggtgtcttcatataaactttaaaattaatttatcc-tttcaaaatg----aaaacatactat i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1422552 277 - 10304083 CCCTCCTTCTCCCCATAGGCCTAGATAACGCTTTGTCACAGGAGAACT-------------GGTgtctggttctgggctctctgtcttcct--ttattaacagatgcatctattcttgttgacaatactgtgtggacttgatcatagcagccttgtagtgtatcctattgtctgtcaa-------------------------------------gacaatac-tgcatcactgttcttttc--cctagttgattaagg----aatacataatggaattggtgtcttcatataaactttaaaattaatttatcc-tttcaaaatg----aaaacatactat i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1500055 277 - 107702431 CCCTCCTTCTCCCCATAGGCCTAGATAACGCTTTGTCACAGGAGAACT-------------GGTgtctggttctgggctctctgtcttcct--ttattaacagattcatctattcttgttgacaatactgtgtggacttgatcatagcagccttatagtatatcctattgtctgtcaa-------------------------------------gtcaatac-tgcatcactattcttttc--cctagttgattaagg----aataaataatggaattggtgtcttcatataaactttaaaattaatttatcc-tttcaaaatg----aaaacatactat i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 988032 277 - 2200435 CCCTCCTTCTCCCCATAGGCCTAGATAACGCTTTGTCACAGGAGAACT-------------GGTgtctggttctgggctctctgtcttcct--ttgttaacagatgcatctattcttgttgacaatactgtgtggacttgatcatagcagccttatagtgtatcctattgtctgtcaa-------------------------------------gtcaacac-tgcatcactattcttttc--cctagttgattaagg----aatacataatggaattggtgtcttcatataaactttaaaattaatttatcc-tttcaaaatg----aaaacatactat i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1420261 275 - 13651311 CCCTCCTTCTCCCCACAGGCCTAGATAACGCTTTGTCACAGGAGAACT-------------GGTgtctggttctgggctctctgtctccct--ttattaacagattcatctattcttgttgacaatac--tgtggacttgatcatagcagccttatagtatatcctattgtctgtcaa-------------------------------------gtcaatac-tgcatcactattcttttc--cctagttgattaagg----aatagataatggaattggtgtcttcatataaactttaaaattaatttatcc-tctcaaaatg----aaaacatactat i colAng1.NW_012118821v1 M 5640 C 0 s calJac3.chr14 1420882 316 - 108792865 CCCTCATTCTCCACACAGGCCTAGGTTACGCCTTGTCACAGAAAAGCT-------------Ggggtctgctt-tgggctccctgtcttctt--tcattaacagatcagtctattcttattgacgatactgtgtggacttgatcatagcggccttctagtGTATTCTATTATCTATAGAATAGATATTCTGTAGAATCGAATCTGTAGAATAGAATATCAATAC-TCCGTCACCAGTC--TTC--CCTAGTTTATTAAGGAATAAATGAATAATGGAAtttgtttcttcacgtaaactttaaaattaacttatccatttcaaaata----aaaaagcactat i calJac3.chr14 C 0 I 1830 s saiBol1.JH378218 1250367 281 - 7082604 CCCTCGTTCTCCACACAGGCCTGGATTACGCTTTGTCACAGGAGAACT-------------GGGGTCTGGAc-tgggttccctgtcttctt--ttgttaatagatttgtctattcttattgacgatactgtgtggacttgatcgtagtggccttctagtgtattctattatctgttga-------------------------------------gtcaatac-tccatcaccagtcttttc--cctagtttattaaggaagaaatgaataatggaatttgtttctttacgtaaactttaaaattaacttacccatttcaaaata----aaaaagcactat i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1344257 281 + 1864846 CCCTCGTTCTCCTCACAGGCCTACATTACGCTTTGTCGCAGGAGAACT-------------GGGGTCTGGTT-TGGGCTCTCTGTCTTCTT--TTATTAATAGATTCATCTATTCTTATTGACGATACTGTGTGGACTTGATCATAGCGGCCTTCTAGTGTATTCTATTACCTGTCGA-------------------------------------GTCAATAC-TCCATCACCAGTCTTTTC--CGTAGTTTATTAAGGAATAAATGAATAATGGAATTTGTTTCTTCACGTAAACTTTAAAATTAACTTATGCATTTCAAAATA----AAAAAGCACTAT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 162870 281 + 287728 CCCTCGTTCTCCACACAGGCCTAGATTACGCTTTGTCACAGGAGAACT-------------GGGGTCTGCTT-TGGGCTCCCTGTCTTCTT--CTATTAATAGATTCGTCTATTCTTATTGACGATACTGTGTGGACTTGATCATAGCGGCCTTCTAGTGTATTCTATTATCTGTCCA-------------------------------------GTCAATAC-TCCATCACCAGTCTTTTC--CCTAGTTTATTAAGGAATAAATGAATAATGAAATTTGTTTCTTCACGTAAACTTTAAAATTAACTTATCCATTTCAAAATA----AAAAAGCACTAT i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1753398 287 + 4416731 ccttccttttccccatga----atataacacttcctcgtagaataacttcacatttatacggggacctaggtctggatttactctcattttcattgctatattatttatctgttcct----acaatatcacactgatttgattacaattaccttatagtatatttgactacatattaa-------------------------------------ggcgagatattcatcattattcccttctacacaatttataaag-----agtaaatagtggaattcatttcttcatgagaactttaagattaatttatcc-attccccctgccccaaatagtgc--- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I a score=2915062.000000 s hg38.chr2_KI270774v1_alt 155625 357 + 223625 cattattattgtaaatgaaattgcatttaatttatacattcatttagagagaaatgatctttTCCCAAAT-----TTTTTGTATATttaatgatgttttatgattttctttttgtagatcatgtga-ttattttgttaaatttacacacctgattttgatcaacttttttgtcattatg-aaagggatttttttttctccattaccattcatggtactttgctaaagaacaaaacaaaaaagaaagaaggaaaagaacagttttatacttatcctcagatcgaagacattttttaaagaaatgttatcaattttttagaatttttagatgttgtagacatctaacatagcattaag-aaaaaa---ta s panTro5.chr2A 1442527 358 + 111504155 cattattattgtaaatgaaattgcatttaatttatacactcatttagagagaaatgatctttTCCCAAAT-----TTTTTGTATATTTAATGATGTTTTATGATTTTCTTTTTGTAGATCATGTGA-TTATTTTGTTAAATTTACACACCTGATTTTGATCAACTTTTTTGTCATTATG-AAGGGATTTTTTTTTTCTCCATTACCATTCATGGTACTTTGCTAAAGAACAAAACAAAAAGGAAAGAAGGAAAAGAACAGTTTTATACTTTTCCTCAGATCGAAGACATTTTTTAAAGAAATGTTATCAATTTTTTAGAATTTTTAGATGTTGTAGACATCTAACATAGCATTAAG-AAAAAA--ATA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1391578 357 + 114371477 cattattattgtaaatgaaattgcatttaatttatacactcatttagagagaaatgatgttttcccaaAT-----TTTTTGTATATTTAATGATGTTTTATGATTTTCTTTTTGTAGATCATGTGA-TTATTTTGTTAAATTTACACACCTGATTTTGATCAACTTTTTTGTCATTATG-AAGGGATTTTTTTTTTCTCCATTACCATTCATGGTACTTTGCTAAAGAACAAAACAAAAAGGAAAGAAGGAAAAGAACAGTTTTATACTTTTCCTCAGATCGAAGACATTTTTTAAAGAAATGTTATCAATTTTTTAGAATTTTTAGATGTTGTAGACATCTAACATAGCATTAAG-AAAAAA---TA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1415760 354 + 1464242 c---attattgtaaatgaaattgcatttaatttatacactcatttagagagaaatgatcttttcccaaAT-----TTTTTGTATATTTAATGATGTTTTATGATTTTCTTTTTGTAGATCATGTGA-TTATTTTGTTAAATTTACACACCTGATTTTGATCAACTTTTTTGTCATTATGAAAGGGATTTTTTTTTTCTCCATTACCATTCGTGGTACTTTGCTAAAGAACAAAACAAAAAGGAAAGAAGGAAAAGAACGGTTTTATACTTTTCCTCAGATCGAAGACATTTTTTAAAGAAATGTTATC-TTTTTTTAGAATTTTTAGATGTTGTAGACATCTAACATAGCATTAAG-AAAAAA---TA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1138604 360 + 81552678 cattattattctaaatgaaattgtatttaatttatacattcatttagaaagaaaggatcttttcccaaat-----tttttgtatatttaatgatgttttatgattttctttttgtagatcatgtga-ttattttgttaaatttacacacctgattttgataaacttttttgtcattatg-aaagggatttttttttctccattaccgttcatggtactttgctaaagaacaaaacaaaaagaaaagaaggaaaagaacaactttatacttttccacagattgaagacactttttaaagaaatgttatcaagtttttagaatttttaggtgttgtagacatctagcatagcattaag-gaaaaaagata i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1467883 353 + 108979918 c---attattctaaatgaaattgcatttaatgtatatactcatttagagagaaatgatcttttCTCAGA------TTTTCATATATTTAATGATGTTTTATGATTTTCTTTTTGTATGTCATGTGA-TTATTTTGTTAAATTTACACACCTGATTTTGATCAACTTTTTTGTCATTATG-AAAGGGATA-TTTTTTCTCCATTACCATTCGTGGTACTTTGCTAaagaacaaaacaaaaagaaaaaaaggacaagaacaaTTTTATACTTTTCCACAGATTGAAGACACTTTTTTAA-AAATTTGATCAAATTTTTAGAAATTTTAGATGTTGTAGACATCTAACATAGCATTAAG-AAAAAA-GATA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1440330 353 - 111193037 c---attattctaaatgaaattgcatttaatgtatacactcatttagagagaaatgatcttttCTCAGA------TTTTCATATATttaatgatgttttatgattttctttttgtatgtcatgtga-ttattttgttaaatttacacacctgattttgatcaacttttttgtcattatg-aaagggata-ttttttctccattaccattcgtggtactttgctaaagaacaaaacaaaaagaaaaaaaggaaaagaacaattttatacttttccacagattgaagacactttttaaa-aaatttgatcaaatttttagaatttttagatgttgtagacatctaacatagcattaag-aaaaaa-gata i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1468317 353 + 3644372 c---attattctaaatgaaattgcatttaatgtatacactcatttagagagaaatgatcttttCTCAGA------TTTTCATATATTTAATGATGTTTTATGATTTTCTTTTTGTATGTCATGTGA-TTATTTTGTTAAATTTACACACCTGATTTTGATCAACTTTTTTGTCATTATG-AAAGGGATA-TTTTTTCTCCATTACCATTCGTGGTACTTTGCTaaagaacaaaacaaaaagaaaaaaaggaaaagaaCAATTTTATACTTTTCCACAGATTGAAGACACTTTTTAAA-AAATTTGATCAAATTTTTAGAATTTTTAGATGTTGTAGACATCTAACATAGCATTAAG-AAAAAA-GATA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1422829 353 - 10304083 c---attattctaaatgaaattgcgtttaatgtatacactcatttagagagaaatgatcttttCTCAGA------TTTTCATATATTTAATGATGTTTTATGATTTTCTTTTTGTATGTCATGTGA-TTATTTTGTTAAATTTACACACCTGATTTTGATCAACTTTTTTGTCATTATG-AAAGGGATATTTTTTTCTCCATTACCATTCGTGGTACTTTGCTaaagaacaaaacaaaaagaaaaaaaggaaaagaacaaTTTTATACTTTTCCACAGATTGAAGACACTTTTTT-A-AATTTTGATCAAATTTTTAGAATTTTTAGATGTTGTGGACATCTAACATAGCATTAAG-AAAAAA-GATA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1500332 353 - 107702431 c---attattctaaatgaaattgcatttaatgtatacactcatttagagagaaatgatctcttCTCAGA------TTTTCGTATATttaatgatgttttatgattttctttttgtatatcatgtga-ttattttgttaaatttacacacctgattttgatcaacttttttgtcattatg-aaagggata-ttttttctccattaccattcgtggtactttgctaaagaacaaaacaaaaagaaaaaaaggaaaagaacaattttatacttttccacagattgaagacactttttaaa-aaatttgatcaattttttagaatttttagatgttgtagacatctaacatagcattaag-aaaaaa-gata i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 988309 353 - 2200435 c---attattctaaatgaaattgcatttaatgtatacactcatttagagagaaatgatcttttCTCAGA------TTTTCATATATTTAATGATGTTTTATGATTTTCTTTTTGTATGTCATGTGA-TTATTTTGTTAAATTTACACACCTGATTTTGATCAACTTTTTTGTCATTATG-AAAGGGATATTTTTTTCTCCATTACCATTTGTGGTACTTTGCTaaagaacaaaacaaaaagaaaaaaaggaaaagaacaaTTTTATACTTTTCCACAGATTGAAGACACTTTTT-TA-AATTTTGATCAAATTTTTAGAATTTTTAGATGTTGTAGACATCTAACATAGCATTAAG-AAAAAA-GATA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1420536 353 - 13651311 c---attattctaaatgaaattgcatttaatgtatacactcatttagagagaaatgatcttttCTCAGA------TTTTCATATATTTAATGATGTTTTATGATTTTCTTTTTGTATATCATGTGA-TTATTTTGTTAAATTTACACACCTGATTTTGATCAACTTTTTTGTCATTATG-AAAGGGATA-TTTTTCCTCCATTACCATTCGTGGTACTTTGCTaaagaacaaaacaaaaagaaaaaaaggaaaagaacaaTTTTATACTTTTCCACAGATTGAAGACACTTTTTAAA-AAATTTGATCAATTTTTTAGAATTTTTAGATGTTGTAGACATTTAACATAGCATTAAG-AAAAAA-GATA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1250648 336 - 7082604 cattattattctaaatgaaattgcatttaatttatacattcatttagagagaaatgatcttttatcagat-----tttttgtatatttaatgatgttttacaactttctttttgtagatgatatga-ttattttgttgaatttacacacttgattttgataaacttttttattattatg-aaatggat--ttttttcttcattatcattcttggtactttgctaaagaacaaaacagaaag----------aaagaacaattttatacttttccacagattgaagacactttctaaagaaattttatc----------aatttttagatgttgtagatatctaacatagcattaag--aaaga-gata i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1344538 345 + 1864846 CATTATTATTCTAGATGAAATTGTATTTAATTTATACATTC----AGAGAGAAATAATCTTTTGTCAGAT-----TTTTTGTACATTTAATGATGTTTTACAATTTTCTTTTTGTAGATGATATGA-TTATTTTGTTAAATTTACACGCTTGATTTTGAGAAACATTTTCATTATTATG-AAATGGAT--TTTTTCTTTCATTATCATTCTTGGTACTTTGCTAAAGAACAAAACAGAAAG---------AAAAGAACAATTTTATACTTTTCCACAGATTGAAGACACTTTTTAAAGAAATTTTATCAATATTTTAGAATTTTTAGATGTTGTAGATATCTAACATAGCATTAAGAAAAAGA-GATA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 163151 346 + 287728 CATTATTATTCTAAATGAAATTTCATTTAATTGATACATTCATTTAGAAAGAAATGATCTTTTGTCAGAT-----TTTTTGTATATTTAATGATGTTTTACAATTTTCTTTTTGTAGATGATATGA-TTATTTTGTTAAATTTACACACTTGATTTTGATAAACGTTTTCATTATTATG-AAATGGAT--TTTTTTCTTCATTATCATTCTTGGTACTTTGCTAAAGAACAAAACAGAAAG---------AAAAGAACAATTTTATAC-TTTCCACAGATTGAAGACACTTTTTAAAGAAATTTTATCAATTTTTTAGCATTTTTAGATGTTGTAGATATCTAACATAGCATTAAG--AAAAA-GATA i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1753685 319 + 4416731 tattgtgattctaattgaaattaaatttatgccctaaat--acctgaagagaactggcatttt-tCAGCTTTTACTTTCTAT-TTTTTATTGATTCTTTATAATTTTCTTCTTATATAACCTGGGATTTATTTGGTTATATGTA------TGTTTTTGAT-AATTTTGTTGCTATTATA-AAGTGATTTTTTTTCCTTCCATTACCATTCTGGGTACTTTGCTAGTAAAAAAA-----------------AAAGGATTAATTTTTTACTATTGTACTGATTGAAGATATTTTTTCCTGAGGttttat----ttttta-----ttta--ctttgtaa-----taatattacattaaa-aatata---ta i dasNov3.JH576208 C 0 I 5380 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e calJac3.chr14 1421198 1830 - 108792865 I a score=998251.000000 s hg38.chr2_KI270774v1_alt 155982 139 + 223625 attttattatgttttaaatcttattttctcttacagtagctttaccagctcttattttattttctagactttggtctaactga---gatagtactaagtaccaacaatgatagcgggagtttctgctagtccttaattttaa s panTro5.chr2A 1442885 139 + 111504155 ATTTTATTATGTTTTAAATCTTATTTTCTCTTATAGTAGTTTTACCAGCTCTTATTTTATTTTCTAGACTTTGGTCTAACTGA---GATAGTACTAAGTACCAACAATGATAGTGGGAGTTTCTGCTAGTCCTTAATTTTAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1391935 139 + 114371477 ATTTTATTATGTTTTAAATCTTATTTTCTCTTATAGTAGTTTTACCAGCTCTTATTTTATTTTCTAGACTTTGGTCTAACTGA---GATAGTACTAAGTACCAACAATGATAGTGGGAGTTTCTGCTAGTCCTTAATTTTAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1416114 138 + 1464242 ATTTTATTATGTTTTAAATCTTATTCTCTCTTATAGTAGTTTTACCAGCTCTTATTTTA-TTTCTAGACTTTGGTCTAACTGA---GATAGTACTAAGTACCAGCAATGATAGTGGGAGTTTCTGCTAGTCCTTAATTTTAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1138964 139 + 81552678 attttattatgttttaaatcttattttcccttatagtagttttaccagctcttattttattttctagacttcggtctaactga---ggtagtactgagtaccaacaatgatagtagatgtttctgctagtccttaattttaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1468236 138 + 108979918 ATTTTATTATGGTTTAAATCTTATTTTCTCTTATAGTAGTTTTACCAGCTCTTGTTTAA-TTTCTAGACTTTGGTCTAACAGA---GATAGTACTAAGTACCAACAATGATAGTGGTTGTTTCTGCTAGTCCTTAATTTTAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1440683 138 - 111193037 attttattatggtttaaatcttattttctcttatagtagttttaccagctcttgtttaa-tttctagactttggtctaacaga---gatagtactaagtaccaacaatgatagtggttgtttctgctagtccttaattttaa i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1468670 138 + 3644372 ATTTTATTATGGTTTAAATCTTATTTTCTCTTATAGTAGTTTTACCAGCTCTTGTTTAA-TTTCTAGACTTTGGTCTAACAGA---GATAGTACTAAGTACCAACAATGATTGTGGTTGTTTCTGCTAGTCCTTAATTTTAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1423182 138 - 10304083 ATTGTATTATGGTTTAAATCTTATTTTCTCTTATAGTAGTTTTACCAGCTCTTGTTTAA-TTTCTAGACTTTGGTCTAACAGA---GATAGTACTAAGTACCAACAATGATAGTGGGTGTTTCTGCTAGTCCTTAATTTTAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1500685 136 - 107702431 attttattatggtttaaatcttattttctcttatagtagttttaccagctcttgtttaa-tttctagactttggtctaac--a---gatagtactaagtaccaacaatgatagtgggtgtttctgctagtccctaattttaa i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 988662 138 - 2200435 ATTGTATTATGGTTTAAATGTTATTTTCTCTTATAGTAGTTTTACCAGCTCTTGTTTAA-TTTCTAGACTTTGGTCTAACAGA---GATAGTACTAAGTACCAACAATGATAGTGGGTGTTTCTGCTAGTCCTTAATTTTAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1420889 138 - 13651311 ATTTTATTATGATTTAAATCTTATTTTCTCTTATAGTAGTTTTACCAGCTCTTGTTTAA-TTTCTAGAATTTGATCTAACAGA---GATAGTACTAAGTACCAACAATGATAGGGGGTGTTTCTGCTAGTCCTTAATTTTAA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1250984 105 - 7082604 attttattatgttttaaatctta---------------------------------ttattttctagactttggtctaactgagatgatagttctaagtatcaacaatgatagt----gtttccactggttcttaattctaa i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1344883 110 + 1864846 ATTTTATTATGTTTTAAATCTTA----------------------------TTATTTTATTTTCTAGACTTTGGTCTAACTGAGATGATAGTACTAAGTATCAATAGTGATAGT----GTTTCTGCTGGTCCTTAATTCTAA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 163497 110 + 287728 ATTTTATTATGTTTTAAATCTTA----------------------------TTATTTTATTTTCTAGACTTTGGTCTAACTGAGATGATAGTACTAAGTGTCAACAATGATAGT----ATTTCTGCTGGTCCTTAATTTTAA i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1754004 5380 + 4416731 I e calJac3.chr14 1421198 1830 - 108792865 I a score=2701945.000000 s hg38.chr2_KI270774v1_alt 156121 310 + 223625 attaaattgttccattg-tttcactgctcgagataatatttgttattgtttctacattatattttagcaattccaa-----tctattctatttctatttagccaggaatGGTAAGTAATAGTAAATTGTGTTATTGCATTTTAAGTACC----tatgatat----taatttttcttctttaatttgctgacaccctggaaaatacaactctattctccaacacggaaccattctgtgaatagattctatttgactatggta-attgctgttttgatttgctgccctat----cttttattattttatttagaa-gggatattgatctgta s panTro5.chr2A 1443024 310 + 111504155 ATTAAATTGTTCCATTG-TTTCACTGCTCAAGATAATATTTGTTATTGTTTCTACATTATATTTTAGCaattccaa-----tctattctatttctatttaaccaggaatggtaagtaatagtaaattgtgttattgcattttaagtacc----tgtgatat----taatttttcttctttaatttgctgacaccctggaaaatataactctattctccaacacggaaccattctgtgaatagattctatttgactatggta-attgctgttttgattggctgccctat----cttttattattttatttagaa-gggatattgatctgta i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1392074 310 + 114371477 ATTAAATTGTTCCATTG-TTTCACTGCTCGAGATAATATTTGTTATTGTTTCTACATTATATTTTAGCAATTCCAA-----TCTATTCTATTTCTATTTAACCAGGAATGGTAAGTAATAGTAAATTGTGTTATTGCATTTTAAGTACC----TGTGATAT----TAATTTTTCTTCTTTAATTTGCTGACACCCTGGAAAATATAACTCTATTCTCCAACACGGAACCATTCTGTGAATAGATTCTATTTGACTATGGTA-ATTGCTGTTTTGATTGGCTGCCCTAT----CTTTTATTATTTtatttagaa-gggatattgatctgta i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1416252 310 + 1464242 ATTAAATTGTTCCATTG-TTTCACTGCTCGAGATAATATTTGTTATTGTTTCTACATTATATTTTAGCAATTCCAA-----TCTATTCTATTTCTATTTAACCAGGAATGGTAAGTAATAGTAAATTGTATTATTGCATTTTAAGTACC----TGTGATAT----TAATTTTTCTTCTTTAATTTGCTGACACCCTGGAAAATACAACTCTATTCTCCAACACGGAACCATTCTGTGAATAGATTCTATTTGACTATGGTA-ATTGCTGTTTTGATTGGCTGCCCTAT----CTTTTATTATTTtatttagaa-gggatattgatctgta i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1139103 316 + 81552678 attaaattgttccattg-tttcactgctcgagataatatttgttattgcttctacattatattttagcaattccaatctattctattctatttctgtttaaccaggaatggtaagtaatagtaaattgtgttactgcattttaagtacc----tgtgatat----taatttttcttctttaatttgttgacaccctggataatataaccctattctccaacatggaaccattctgtgaacagattctatttgactatgata-attgctgttttgattggctgccctat----cttttattattttatttagaaggggatattgatctgta i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1468374 312 + 108979918 ATTAAATTGTTCCATTG-TTTAACTGCTCAAGATAATATTTGTTATTGCTTCTACATTATATTTTAGCAATTCCAATCTACTCTATTCCATTTCTATTTAACCAGGAATGGTAAGTAATAGTACCTTGTATTATTGCATTTTAAGTACC----TGTGATAT----TAATTTTTCTTCTTTAATTTGTCGACACCCTGGATAATATAACCCTA---TCCAACACGGAACCATTCTGTGAATAGATTCTATTTGACTCTGGTA-ATTGCC-TTTTGATTGGCTGCCCTAT----CTTTTATTATTTTATTTAGAAGGGGATACTGACCTGTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1440821 312 - 111193037 attaaattgttccattg-tttaactgctcaagataatatttgttattgcttctacattatattttagcaattccaatctactctattccatttctatttaaccaggaatggtaagtaatagtaccttgtattattgcattttaagtacc----tgtgatat----taatttttcttctttaatttgtcgacaccctggataatataacccta---tccaacacggaaccattctgtgaatagattctatttgactctggta-attgcc-ttttgattggctgccctat----cttttattattttatttagaaggggatactgacctgta i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1468808 312 + 3644372 ATTAAATTGTTCCATTG-TTTAACTGCTCAAGATAATATTTGTTATTGCTTCTACATTATATTTTAGCAATTCCAATCTACTCTATTCCATTTCTATTTAACCAGGAATGGTAAGTAATAGTACCTTGTATTATTGCATTTTAAGTACC----TGTGATAT----TAATTTTTCTTCTTTAATTTGTCGACACCCTGGATAATATAACCCTA---TCCAACACGGAACCATTCTGTGAATAGATTCTATTTGACTCTGGTA-ATTGCC-TTTTGATTGGCTGCCCTAT----CTTTTATTATTTTATTTAGAAGgggatactgacctgta i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1423320 311 - 10304083 ATTAAATTGTTCCATTG-TTTAACTGCTCAAGATAATATTTGTTATTGCTTCTACattatattttagcaattccaatctactctattccatttctattTAACCAGGAATGGTAAGTAATAGTACCTTGTATTATTGCATTTTAAGTACC----TGTGATAT----TAATTTTTCTTCTTTAATTTGTCGACACCCTGGATAATATAACCCTA---TCCAACACGGAACCATTCTGTGAATAGATTCTATTTGACTC-GGTA-ATTGCC-TTTTGATTGGCTGCCCTAT----CTTTTATTATTTTATTTAGAAGgggatactgacctgta i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1500821 312 - 107702431 attaaattgttccattg-tttaactgctcaagataatatttgttattgcttctacattatattttagcaattccaatctattctattccatttctatttaaccaggaatggtaagtaatagtaccttgtattattgcattttaagtacc----tgtgatat----taatttttcttctttaatttatcgacaccctggataatataacccta---tccaacacggaaccattctgtgaatagattctatttgactctggta-attgct-ttttgattggctgccctat----ctttcattattttatttagaaggggatattgacctgta i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 988800 312 - 2200435 ATTAAATTGTTCCATTG-TTTAACTGCTCAAGATAATATTTGTTATTGCTTCTACattatattttagcaattccaatctattctattccatttctattTAACCAGGAATGGTAAGTAATAGTACCTTGTATTATTGCATTTTAAGTACC----TGTGATAT----TAATTTTTCTTTTTTAATTTGTCGACACCCTGGATAATATAACCCTA---TCCAACACGGAACCATTCTGTGAATAGATTCTATTTGACTCTGGTA-ATTGCC-Ttttgattggctgccctat----attttattattttatttagaaggggatattgacctgta i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1421027 312 - 13651311 ATTAAATTGTTCCATTG-TTTAACTGCTCAAGATAGTATTTGCTATTGCTTCTACATTATATTTTAGCAATTCCAATCTATCCTATTCCATTTCTATTTAACCAGGAATGGTAAGTAATAGTACCTTGTATTATTGCATTTTAAGTACC----TGTGATAT----TAATTTTTCTTCTTTAATTTGTCGACACCCTGGATAATATAACCCTA---TCCAACACGGAACCATTCTATGAATAGATTCTATTTAACTCTGGTC-ATTGCC-TTTTGATTGGCTGCCCTAT----CTTTTATTATTTTATTTAGAAGGGGATATTGACCTCTA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1251089 316 - 7082604 attaattggttccattg-ttttactgtttgagataatatttgttattgcttctacgttatattttagcaattccaatatattctattctatttctatttaaccaggaatg----gtaatagtaaattttatatttgcagttaaagtacc----tgtgatat---ataatttttcttctttaacttgctgataccctggataatataaccctattctccaacacggagccattctgtgaatagattctatttggctgtggta-atcactcttttgattggtggccctatctggcttttattattttattttgaa-gggatattgatcagta i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1344993 316 + 1864846 ATTAAATAGTTCCATTG-TTTCACTGATTGAGATAATATTTGTTATTGCTTCTGCattatattttagcaattccaatctattctattctatttctattGAACCCGGAATG----GTAATAGTAAATTTTATATTTGCAGTTTAAGTGCC----tgtgatat---ataatttttcttctttaacttgtcgataccctggataatataaccctgttctccaacacggagccattctgtgaatagattccatttggctgtggta-atcactcttttgattggcggccctatctggcttttattattttattttgaa-gggatattgatcagtg i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 163607 316 + 287728 ATTAAATGGTTCCGTTG-TTTTACTGTTCGCGATAATATTTGTTATTGCTCCTACGTTATGTTTTAGCAATTCCAGTGTATTCTACTCTGTTTCTATTTAACCAGGAACG----GTAATAGTAAATTCTATATTTGCAGTTTAAGTGCC----tgtgatat---ataatttttcttctttaacttgtcaataccctggataatataaccctactcgccaacacggagccattctgtgaatagattctacttggccgtggta-atcactcttttgatTGGCGGCCCTATCTGGCTTTTATTATTTTAGTTTGAA-GGGATATTGATCAGTA i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1759384 308 + 4416731 accaaactgctacaATGATTTTATAGTTTAAGATAATATTTGCTATTGCTTCTACATTATATTTAATCAATTTTA------------CTATTTCAGTTTTACTAGAAATGGTAAA-AATAGAgaactttatcattgcattttaagtatctatttgtattattttattatttttctcctttaatctgttg-ctttttggattatattaatctattccctaatattgaaaaactctgggaataaatcct-cttggtcatagcattttactctttggactcgttgatctat------tctattattttatttagaa-gggatattgatctgca i dasNov3.JH576208 I 5380 I 136 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e calJac3.chr14 1421198 1830 - 108792865 I a score=2894982.000000 s hg38.chr2_KI270774v1_alt 156431 328 + 223625 tgccctgtccttgtc--------------------------------------------------------------------------------------------ctgttttcatcagaggccaatacaaaagtttcgctgactctgtagagtgcactggggcccttttcatctt-ttccatggctgaaatagtt-taagcaaccttggagtt-acctatcctttcgagatttgatagaagtccaccgt-caatgccatctgacct-----------------ctggatttctgatcaccttgtctatctcttccatcctcattgtccattg-gagttttaca-tttcttcttggaaaagctgtggttatttctattttgttagggagtcatcgatctgttcttcattttccaatgtgctgccatgaaaccgcat-atacag s panTro5.chr2A 1443334 328 + 111504155 tgccctgtccttgtc--------------------------------------------------------------------------------------------ctgttttcatcagaggccaatacaaaagtttcactgactctgtagagtgcactggggcccttttcatctt-ttccatggctgaaatagtt-taagcaaccttggagtt-acctgtcctttcgagatttgatagaagtccaccgt-caatgccatctgacct-----------------ctggatttctgatcaccttgtctatctcttccatcctcattgtccattg-gagttttaca-tttcttcttggaaaagctgtggttatttctgttttgttagggagtcatcgatctgttcttcattttccaatgtgttgccatgaaaccgcat-atacag i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1392384 328 + 114371477 tgccctgtccttgtc--------------------------------------------------------------------------------------------ctgttttcatcagaggccaatacaaaagtttcactgactctgtagagtgcactggggcccttttcatctt-ttccatggctgaaatagtt-taagcaaccttggagtt-acctgtcctttcgagatttggtagaagtccaccgt-caatgccatctgacct-----------------ctggatttctgatcaccttgtctatctcttccatcctcattgtccattg-gagttttaca-tttcttcttggaaaagctgtggttatttctgttttgttagggagtcatcgatctgttcttcattttccagtatgttgccatgaaaccgcat-atatag i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1416562 328 + 1464242 tgccctgtccttatc--------------------------------------------------------------------------------------------ctgttttcatcagaggccaatacaaaagtttcgctgactctgtagagtgcactggggcccttttcatctt-ttccatggctgaaatagtt-taagcaaccttggagtt-acctatcctttcgagatttgatagaagtccaccgt-caatgccatctgacct-----------------ctggatttctgatcaccttgtctatctcttccatcctcattgtccattg-gagttttaca-tttcttcttggaaaagctgtggttatttctgttttgttagggagtcatcgatctgttcttcattttccaatgtgttgccatgaaaccgcat-atacag i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1139419 328 + 81552678 tgctctgtccttgtc--------------------------------------------------------------------------------------------ctgttttcatcagaggccaatacaaaagtttcactgactctgcagaatgcactggggcccttttcatctt-ttccatggctgaaatagtt-tgagcaaccttggagtt-acctatcctttcgagatttcatagaaatccaccgt-cagtgccatctgacct-----------------ctggatttctgatcaccttgtctatctcttccatcctcattgtccattg-gagttttaca-tttcttcttggaaaaactgtggttatttctattttgttagggagtcatcgatctgttcttcattttccaacgtgttgccatgaaaccgcat-atacag i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1468686 328 + 108979918 TGCCCCATCCTTGTC--------------------------------------------------------------------------------------------CTGTTTTCATCAGAGGCCAACACAAAAGTTTCGCTGACTCTGTAGAACTCACTGGGGCCCTTTCCATCTT-TTCTGTGGCTGAAATAGTT-TAAGCAACCTTGGAGTT-ACCTATCCTTTCGAGATTTGATGGAAGTTCACTGT-CAGTGCCATCTGATCC-----------------CTGGATTTCTGATCACCTTGTCTGTCTCTTCCATCCTCATTGTCCTTTG-GAGTTTTACA-TTTCTTCTTGGAAACATTGTGGTTATTTCCATTTTGTTAGGGAGTCATCCATCGGCTCTTCATTTTCCAGTGTGTTGCCATGAAACTGCGT-AGACAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1441133 328 - 111193037 tgccccatccttgtc--------------------------------------------------------------------------------------------ctgttttcatcagaggccaacacaaaagtttcgctgactctgtagaacgcactggggccctttccatctt-ttctgtggctgaaatagtt-taagcaaccttggagtt-acctatcctttcgagatttgatggaagttcactgt-caatgccatctgatcc-----------------ctggatttctgatcaccttgtctgtctcttccatcctcattgtcctttg-gagttttaca-tttcttcttggaaacattgtggttatttccattttgttagggagtcatccatcggctcttcattttccagtgtgttgccatgaaactgcat-agacag i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1469120 328 + 3644372 tgccccatccttgtc--------------------------------------------------------------------------------------------ctgttttcatcagaggccaacacaaaagtttcgctgactctgtagaacgcactggggccctttccatctt-ttctgtggctgaaatagtt-taagcaaccttggagtt-acctatcctttcgagatttgatggaagttcactgt-caatgccatctgatcc-----------------ctggatttctGATCACCTTGTCTGTCTCTTCCATCCTCATTGTCCTTTG-GAGTTTTACA-TTTCTTCTTGGAAACATTGTGGTTATTTCCATTTTGTTAGGGAGTCATCCATCGGCTCTTCATTTTCCAGTGTGTTGCCATGAAACTGCAT-AGACAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1423631 328 - 10304083 tgccccgtccttgtc--------------------------------------------------------------------------------------------ctgttttcatcagaggccaacacaaaagtttcgctgactctgcagaacgcactgggggcctttccatctt-ttctgtggctgaaatagtt-taagcaaccttggagtt-acctatcctttcgagatttgatggaagtccaccgt-caatgccatctgatcc-----------------ctggatttctGATCACCTTGTCTGTCTCTTCCATCCTCATTGTCCTTTG-GAGTTCTACA-TTTCTTCTTGGAAAAATTGTGGTTATTTCCATTTTGTTAGGGAGTCATCCATCGGCTCTTCATTTTCCAGTGTGTTGCCATGAAACTGCAT-AGACAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1501133 329 - 107702431 tgccccgtccttgtc--------------------------------------------------------------------------------------------ctgttttcatcagaggccaacacaaaagttttgctgactctgtagaacgcactgggggcctttccatctt-ttctgtcgctgaaatagtt-taagcaaccttggagttaacctgtccttacgagatttgatagaagtccactgt-caatgccatctgatcc-----------------ctggatttctgatcaccttgtctgtctcttccatcctcattgtcctttg-gagttttaca-tttctttttggaaaaattgtggttatttccattttgttagggagtcatccatcggctcttcattttccagtgtgttgccatgaagctgcac-agacag i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 989112 328 - 2200435 tgccccgtccttgtc--------------------------------------------------------------------------------------------ctgttttcatcagaggccaacacaagagtttcgctgactctgtagaacgcactgggggcctttccatctt-ttctgtggctgaaatagtt-taagcaaccttggagtt-acctatcctttcgagatttgatggaagtccactgt-caatgccatctgatcc-----------------ctggatttctgatcaccttgtctgtctctcccatcctcattgtcctttg-gagttttaca-tttcttcttggaaaaattgtggttatttctattttattagggagccatccatcggctcttcattttccagtgtgttgccatgaaactgcat-agacag i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1421339 328 - 13651311 TACCCCGTCCTTGTC--------------------------------------------------------------------------------------------CTGTTTTCATCAGAGGCCAACACAAAAGTTTCACTGACTCTGTAGAACGCACTGGGGGCCTTTCCATCTT-TTCTGTGGCTGAAATAGTT-TTAGCAACCTTGGAGTT-ACCTATCCTTTCGAGATTTGACGGAAGTCCACTGT-CAATGCCATCTGATCC-----------------CTGGATTTCTGATCGCCTTGTCTGTCTCTTCCATCCTCACTGTCCTTTG-GAGTTTTACA-TTTCTTCTTGGAAAAATTGTGGTTATTTCCATTTCATTAGGGAGTCATCCATCGGCTCTTCATTTTCCAGTGTGTTGCCATGAAACTGCAT-AGACAG i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1251405 327 - 7082604 tgctctgtccttgtc--------------------------------------------------------------------------------------------ctgttgtcatcagaggccaatacaaaagtttggctgactctgtagaatgcagtggggccctttccatctt-tcctatggctgaaatcgtt-taagcaaccttggagtt-acctaacctttcgagatttgatagaagaccgctgt-cgatgccatctgatcc-----------------gtagatttctgatcaccttgtccatctcttccatactcattgtccactg-gagttttaca-tgtctccttgggaaaagtgtggttatttctattttgcta-ggagtcacccgcctgctcctcaggttccagtgtgctgCCGTGAAAGTGCAT-ATACAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1345309 328 + 1864846 tgctctgtccttgtc--------------------------------------------------------------------------------------------ctgttgtcatcagaggccaatacgaaagtttggctgcctctgtagaatgcagtggggccctttccatcct-tcctatggctgaaatcgtt-taagcaaccttggagtt-atctaaccttttgagatttgatagaagactgctgt-caatgccatctgatct-----------------gtacatttctGATCACC-TGTCCATCTCCTCCATCCTCATTGTCCACTG-GAGTTTTACATTGTTTTCTTGGAAAAAGTGTGGTTATTTCTATTTTGCTAGGGAGTCATCCACCTGCTCCTCACGTTCCAGTGTGCTGCCATCAAAGTGCAT-ATACAG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 163923 327 + 287728 TGCTCTGTCCTTGTC--------------------------------------------------------------------------------------------CTGTTGTCATCAGAGGCCAATACGAAAGTTTTGCTGACTCTGTAGAATGCAGTGGGACCCTTTCCATC-T-TCCTATGGCTGAAACCGTT-TAAGCAACCTTGGAGTT-ACCTAACCTTCTGAGATTTGATAGAAGACCGATGT-CAGTGCCATCTGATCC-----------------GTACATTTCTGATCACCTTGTCCATCTCTTCCATCCTCATTGTCCACTG-GAGTTTTACA-TGTCTTCTTGGGAAAAGTGTGGTTATTTCTATTTTGCTAGGGAGTCGTCCACCTGCTCCTCACGTTCCAGCGTGCTGCCATGAGAGTGCAC-GCACAG i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1759828 437 + 4416731 tgttttgttgttgttgtttgtttttaggaggcattgggaacctaacctgggacctcctatgtgggaaacaggctctcaaccacttgagccatatcgactcttctttactatttttatcagaagctaatattaaagttttgctgacctgctaaaatgaatttggccccttcccatcttcttctatggctgaaaaagctataaacaacattggaatt-atctatcctttgaaggttttatggaactcagctgtatagtaccatctggtcctggtgctttatacaatgttagatctctgatcatcttgccaaactcctctgtgataattggtccttgtgagttttcca-tttctccttgatatgatt-tgtttaattctattttgccaggaaagcttccattggttctttgttttcaaatatgtt-CCAT---ACTGTGTGAAACAA i dasNov3.JH576208 I 136 C 0 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e calJac3.chr14 1421198 1830 - 108792865 I a score=1155723.000000 s hg38.chr2_KI270774v1_alt 156759 138 + 223625 tcgctcctggttcttctcatctctC-----CTGC--ATGCCTGAGCCCTGCTCCTTTCTCATGGCAAAT------CCTGCCTCACTCGGTGCTCTTTC-TTTGTTTTCCACACTGGGTTGTGAAG-CAGGGCTTCATGTTTTCTTCCCACCAG s panTro5.chr2A 1443662 138 + 111504155 tcgctcctgattcttctcatctctc-----ctgc--atgcctgagccctgctcctttctcatggcaaat------cctgcctcactctgtgctctttc-tttgttttccACACTGGGTTGTGAAG-CAGGGCTTCATGTTTTCTTCCCACCAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1392712 138 + 114371477 tcgctcctgattcttctcatctctC-----CTGC--ATGCCTGAGCCCTGCTCCTTTCTCATGGCAAAT------CCTGCCTCACTCTGTGCTCTTTC-TTTGTTTTCCACACTGGGTTGTGAAG-CAGGGCTTCATGTTTTCTTCCCACCAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1416890 138 + 1464242 tcgctcctgattcttctcatctctC-----CTGC--ATGCCTGAGCCCTGCTCCTTTCTCATGGCAAAT------CCTGCCTCCCTCTGTGCCCTTTC-TTTGTTTTCCACACTGGGTTGTGAAG-CAGGGCTTCATGTTTTCTTCCCACCAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1139747 135 + 81552678 tcgctcctgattcttctca--tctc-----ctgc--gtgcct-agccctgctcctctctcactgcaaat------cctgcctcactctgtgcccttgc-tttgttttccacgctgggttgtgaag-cagggcttcatgttttcttcccaccag i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1469014 138 + 108979918 TCGCTCCTGATTCTTCTCGTCTCTC-----CTGC--GTACCTGAGCCCTGCTCCTTTCTCATTCCAAAT------CCTGCCTCACTCTGTGCCCTTTC-TTTGTTTTCCACACTGGGTTGTGAAG-CAGAGCTTTATGTTTTCTTCCCACCAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1441461 138 - 111193037 tcgctcctgattcttctcgtctctc-----ctgc--gcacctgagccctgctcctttctcattccaaat------cctgcctcactctgtgccctttc-tttgttttccacactgggttgtgaag-cagagctttatgttttcttcccaccag i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1469448 130 + 3644372 TCGCTCCTGATTCTTCTCGTCTCT---------------CCTGAGCCCTGCTCCTTTCTCACTCCAAAT------CCTGCCTCACTCTGTGCCCTTTC-TTTGTTTTCCACACTGGGTTGTGAAG-CAGAGCTTTATGTTTTCTTCCCACCAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1423959 138 - 10304083 TCGCTCCTGATTCTTCTCGTCTCTC-----CTGC--GCACCTGAGCCCTGCTCCTTTCTCATTCCAAAT------CCTGCCTCACTCTGTGCCCTTTC-TTTGTTTTCCACACTGGGTTGTGAAG-CAGAGCTTTATGTTTTCTTCCCACCAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1501462 138 - 107702431 tcgcccctgattcttctcgtctctc-----ctgc--acacttgagccctgctcctttctcattccaaat------cctgcctcactctgtgccctttc-tttgtttttcacactgggttgtgaag-cagagctttatgttttcttctcaccag i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 989440 138 - 2200435 tcgctcctgattcttCTCGTCTCTC-----CTGC--GCACCTGAGCCCTGCTCCTTTCTCATTCCAAAT------CCTGCCTCACTCTGTGCCCTTTC-TTTGTTTTCCACACTGGGTTGTGAAG-CAGAGCTTTATGTTTTCTTCCCACCAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1421667 135 - 13651311 TCGCTCCTGATTCTTCTCGTCTCTC-----CTGC--GCACCTGAGCCCTGCTCCTTTCTCATTCCAAAT------CCTGCCTCACTCTGTGCCCTTTC-TTTGTTTTCCACATTGGATTGTGAAG-CAGAGCTTT---TTTTCTTCCCACCAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1423028 144 - 108792865 TCACCCCTGC--CCTTCCTCATTCCAGATGCTGCCGCTGCCTCACCCCTGC-CCTTCCTCATTCCAGATGCTGCCTCTGCCTCA--CCCTGCCCTCTC---TCTCTACCATACTGGGCTGTGGAG-CACCGCTTTGCGTTTTCCTCCCAGCAg i calJac3.chr14 I 1830 C 0 s saiBol1.JH378218 1251732 140 - 7082604 CCGCTCCCGG--CTTCTCTGCTCTC-----CTGC----ACCTGAGCCCTGCTCCTTTCTCAGTCCCAGTGCTGCGTCCGCCTCAAGCCCTGCTCTTTC-CTTCTCTTCCACGCTGGACTGTGGAG-CAGGGCTTTGTGTTTTCCTCCCAGCAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1345637 140 + 1864846 CTGCTCCCGA--CTGCTCTTCTCTC-----CTGC----GCCTGAGCCCTGCTCCTTTCTCATTCCAAATGCTGCTTCTGCCTCATGCCCTGCCCTTTC-CTTCTCTTCCACACTGGGCTGTGGAG-CAGGGCTTTGTGTTTTCCTCCCAGCAG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 164250 142 + 287728 CCGCTCCCGA--CTGCTCTTCTCGC-----CTGC--GCGCCCGAGCCCTGCTCCTTTCTCATTCCAAATGCTGCCTCTGCCTCATCCCCTGCCCTTTC-TTTCTCTTCCACACTGGGCTGTGGAG-CAGGGCTTCGTGTTTTCCTCCCAGCAG i aotNan1.NW_018513311v1 C 0 I 71 s dasNov3.JH576208 1760265 129 + 4416731 TCACTTAAAAATCTTTTAATCTCCC-----TTAT----------ACCTCActcctttctcattccaaat------cttcctttgattt-tgctctttcttttatctttcat-caggcttttgaagtttgtgatttatatttcctttctacca- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I a score=142350.000000 s hg38.chr2_KI270774v1_alt 156897 16 + 223625 GTCTTTTATTCATAGT s panTro5.chr2A 1443800 16 + 111504155 GTCTTTTATTCATAGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1392850 16 + 114371477 GTCTTTTATTCATAGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1417028 16 + 1464242 GTCTTTTATTCATAGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1139882 16 + 81552678 gtcttttattcatagt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1469152 16 + 108979918 TTCTTTTATTCATAGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1441599 16 - 111193037 ttcttttattcatagt i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1469578 16 + 3644372 TTCTTTTATTCATAGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1424097 16 - 10304083 TTCTTTTATTCATACT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1501600 16 - 107702431 gtcttttattcataat i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 989578 16 - 2200435 TTCTTTTATTCATAGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1421802 16 - 13651311 GTCTTTTATTCATAGT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1423172 16 - 108792865 ctcttttattcagagt i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1251872 16 - 7082604 GTCTTTTATTCATAGT i saiBol1.JH378218 C 0 I 374 s cebCap1.NW_016107827v1 1345777 16 + 1864846 GTTTTTTATTCATAGT i cebCap1.NW_016107827v1 C 0 C 0 s dasNov3.JH576208 1760394 14 + 4416731 --ttcttatttttaat i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 164392 71 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I a score=12029.000000 s hg38.chr2_KI270774v1_alt 156913 5 + 223625 --TAATT----- s panTro5.chr2A 1443816 5 + 111504155 --TAATT----- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1392866 5 + 114371477 --TAATT----- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1417044 5 + 1464242 --TAACC----- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1139898 5 + 81552678 --taatt----- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1469168 5 + 108979918 --TAAtt----- i rheMac8.chr13 C 0 I 1 s macFas5.chr13 1441615 5 - 111193037 --taatt----- i macFas5.chr13 C 0 I 1 s macNem1.NW_012011978v1 1469594 5 + 3644372 --TAAtt----- i macNem1.NW_012011978v1 C 0 I 1 s cerAty1.NW_012000820v1 1424113 5 - 10304083 --TAATT----- i cerAty1.NW_012000820v1 C 0 I 1 s chlSab2.chr14 1501616 5 - 107702431 --taatt----- i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012103754v1 989594 5 - 2200435 --TAATT----- i manLeu1.NW_012103754v1 C 0 I 1 s colAng1.NW_012118821v1 1421818 5 - 13651311 --TAATG----- i colAng1.NW_012118821v1 C 0 I 1 s calJac3.chr14 1423188 3 - 108792865 --taa------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1252262 3 - 7082604 --TAA------- i saiBol1.JH378218 I 374 C 0 s cebCap1.NW_016107827v1 1345793 3 + 1864846 --TAA------- i cebCap1.NW_016107827v1 C 0 I 178 s dasNov3.JH576208 1760408 12 + 4416731 tctagtgtatga i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 164392 71 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I a score=8281.000000 s hg38.chr2_KI270774v1_alt 156918 1 + 223625 A s panTro5.chr2A 1443821 1 + 111504155 A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1392871 1 + 114371477 A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1417049 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1139903 1 + 81552678 a i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1469174 1 + 108979918 a i rheMac8.chr13 I 1 C 0 s macFas5.chr13 1441621 1 - 111193037 a i macFas5.chr13 I 1 C 0 s macNem1.NW_012011978v1 1469600 1 + 3644372 a i macNem1.NW_012011978v1 I 1 C 0 s cerAty1.NW_012000820v1 1424119 1 - 10304083 A i cerAty1.NW_012000820v1 I 1 C 0 s chlSab2.chr14 1501622 1 - 107702431 a i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012103754v1 989600 1 - 2200435 A i manLeu1.NW_012103754v1 I 1 C 0 s colAng1.NW_012118821v1 1421824 1 - 13651311 A i colAng1.NW_012118821v1 I 1 C 0 s aotNan1.NW_018513311v1 164463 1 + 287728 A i aotNan1.NW_018513311v1 I 71 C 0 s dasNov3.JH576208 1760420 1 + 4416731 a i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1252265 0 - 7082604 C e cebCap1.NW_016107827v1 1345796 178 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e calJac3.chr14 1423191 0 - 108792865 C a score=3457428.000000 s hg38.chr2_KI270774v1_alt 156919 338 + 223625 TTTTAACTTCTGCATGCATTAATTTAACTTTCTCATTTATTTGTGCTTTAGCTCTTTGTTACTTAACTAAATTCTTAAAATAGCTACTTAATTTCT--TGGTTTTTGTTG---TTTTGATGAAAGCA-----------------ATTTAAAGAGCACAGATTTTCTTCTGAGGAAGG-CTTTGCTGGTGTGCTTGAATTTTCTTAACAAGTGAGTTAACTTTTCATTGATTTCTGGAGACACTTTCAGCTCTTCTTAAGA---GTCTCTTTGAATCAGTGAG----TAGGAGAATTTGCAGC--TCCTTGTTATTTATTTGTAATTTTATTATTATTTGTGCTCTTCAATTTAATTCCTCTATTTCCTCC- s panTro5.chr2A 1443822 338 + 111504155 TTTTAACTTCTGCATGCATTCATTTAACTTTCTCATTTATTTTTGCTTTAGCTCTTTGTTACTTAACTAAATTCTTAAAACAGCTACTTAATTTCT--TGGTTTTTGTTG---TTTTGATGAAAGCA-----------------ATTTAAAGAGCACAGATTTTCTTCTGAGGAAGG-CTTTGCTGGTGTGCTTGAATTTTCTTAACAAGTGAGTTAACTTTTCATTGATTTCTAGAGAGACTTTCAGCTCTTCTTAAGA---GTCTCTTTGAATCAGTGAG----TAGGAGAATTTGCAGC--TCCTTGTTATTTATTTGTAATTTCATTATTATTTGTGCTCTTCAATTTAATTCCTCTATTTCCTCC- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1392872 338 + 114371477 TTTTAACTTCTGCATGCATTCATTTAACTTTCTCATTTATTTTTGCTTTAGCTCTTTGTTACTTAACTAAATTCTTAAAAAAGCTACTTAATTTCT--TGGTTTTTGTTG---TTTTGATGAAAGCA-----------------ATTTAAAGAGCACAGATTTTCTTCTGAGGAAGG-CTTTGCTGGTGTGCTTGAATTTTCTTAACAAGTGAGTTAACTTTTCATTGATTTCTAGAGAGACTTTCAGCTCTTCTTAAGA---GTCTCTTTGAATCAGTGAG----TAGGAGAATTTGCAGC--TCCTTGTTATTTATTTGTAATTTTATTATTATTTGTGCTCTTCAATTTAATTCCTCTATTTCCTCC- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1417050 338 + 1464242 TTTTAACTTCTGCATGCATTAATTTAACTTTCTCATTTATTTTCGCTTTAGCTCTTTGTTACTTAACTAAACTCTTAAAATAGCTACTTAATTTCT--TGGTTTTTGTTG---TTTTGATGAAAGCA-----------------ATTTAAAGAGCACAGATTTTCTTCTGAGGAAGG-CTTTGCTGGTGTGCTTGAATTTTCTTAACAAGGGAGTTAACTTTTCATTGATTTCTAGAGAGACTTTCAGCTCTTCTTAAGA---GTCTCTTTGAATCAGTGAG----TAGGAGAATTTGCAGC--TCCTTGTTATTTATTTGTAATTTTATTATTATTTGTGCTCTTCAATTTAATTCCTCTATTTCCTCC- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1139904 336 + 81552678 ttttaacttctgcatgcattaatttaactttctcatttatttttgctttagctctctattccttaactaaattcttaaaatagctacttaatttct--ttgtttttgttg---ttcttatgaaagca-----------------atttaaagagcacagattttcttctgaggaagg-ctttgctggtgtgcttgaattttcttaacaagcgagttaacttttcattgatttctagagagaattttagctcttctt--ga---gtctctttgaatcagtgag----taggagaatttgcagc--tccttgttatttatttgtaattttattattatttgtgctcttcaatttaattccTCTATTTCCTCC- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1469175 338 + 108979918 ttttaacttctgcgtgtattaatttaactttctcatttacttttgctttAGCTCTCTGTTCCTCAACTAAATTCTTAAAATAGCTACTTAATTTCT--TTGTTTTTGTTG---TTTTGATGAAAGCA-----------------ATTTAAAGACTATAAATTTTCTTCTGAGGGAGG-CTTTGCTGGTGTTCTTGAATTTTCTTAACAAGCAAGTTAACCTTTCATTGATTTCTAGAGAGACTTTCAGTTCTTCTTAAGA---GTCTCTTTGAATCAGTTAT----TAGGAGAATTTGCAGC--TCCTTGTTATTTATTTGTAATTTTATTATTATTTGTGCTCCTCAATTTGATTCCTCTATTTCCTCT- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1441622 338 - 111193037 ttttaacttctgcgtgtattaatttaactttctcatttacttttgctttagctctctgttcctcaactaaattcttaaaatagctacttaatttct--ttgtttttgttg---ttttgatgaaagca-----------------atttaaagactataaattttcttctgagggagg-ctttgctggtgttcttgaattttcttaacaagcaagttaacctttcattgatttctagagagactttcagttcttcttaaga---gtctctttgaatcagttat----taggagaatttgcagc--tccttgttatttatttgtaattttattattatttgtgctcctcaatttgattcctctatTTCCTCT- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1469601 338 + 3644372 ttttaacttctgcgtgtattaatttaactttctcatttacttttgctttAGCTCTCTGTTCCTCAACTAAATTCTTAAAATAGCTACTTAATTTCT--TTGTTTTTGTTG---TTTTGATGAAAGCA-----------------ATTTAAAGACTATAAATTTTCTTCTGAGGGAGG-CTTTGCTGGTGTTCTTGAATTTTCTTAACAAGCAAGTTAACCTTTCATTGATTTCTAGAGAGACTTTCAGTTCTTCTTAAGA---GTCTCTTTGAATCAGTTAT----TAGGAGAATTTGCAGC--TCCTTGTTATTTATTTGTAATTTTATTATTATTTGTGCTCCTCAATTTGATTCCTCTATTTCCTCT- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1424120 338 - 10304083 TTTTAACTTCTGCGTGTATTAATTTAACTTTCTCATTTACTTTTGCTTTAGCTCTCTGTTCCTTAACTAAATTCTTAAAATAGCTACTTAATTTCT--TTGTTTTTGTTG---TTTTGATGAAAGCA-----------------ATTTAAAGACTATAAATTTTCTTCTGAGGGAGG-CTTTGCTGGTGTTCTTGAATTTTCTTAACAAGCGAGTTAACCTTTCATCAATTTCTAGAGAGACTTTCAGTTCTTCTTAAGA---GTCTCTTTGAATCAGTTAT----TAGGAGAATTTGCAGC--TCCTTGTTATTTATTTGTAATTTTATTATTATTTGTGCTCCTCAATTTAATTCCTCTATTTCCTCT- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1501623 338 - 107702431 ttttaagttctgcatgtattaatttaactttctcatttacttttgctttagctctctgttccttaactaaattcttaaaatagccacttaatttct--ttgtttttgttg---ttttgatgatagca-----------------atttaaagagtatagattttcttttgagggagg-ctttgctggtgttcttgaattttgttaacaagcaagttaacctttcatcgatttctagagagactttcagctcttcttaaga---gtctctttcaatcagttat----taggagaatttgcagc--tccttgttatttatttgtaattttattattatttgtgctcctcaatttaattcctctatTTCCTCT- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 989601 338 - 2200435 TTTTAACTTCTGCGTGTATTAATTTAACTTTCTCATTTACTTTTGCTTTAGCTCTCTGTTCCTTAACTAAATTCTTAAAATAGCGACTTAATTTCT--TGGTTTTTGTTG---TTTTGATGAAAGCA-----------------ATTTAAAGACTGTAAATTTTCTCCTGAGGGAGG-CTTTGCTGGTGTTCTTGAATTTTCTTAACAAGCGAGTTAACCTTCCATCGATTTCTAGAGAGACTTTCAGCTCTTCTTAAGA---GTCTCTTTGAATCAGTTAT----TAGGAGAATTTGCAGC--TCCTTGTTATTTATTTGTAATTTTATTATTATTTGTGCTCCTCAATTTAATTCCTCTATTTCCTCT- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1421825 336 - 13651311 TTTTAACTTCTGCATGTATTAATTTAACTTTCTCATTTACTTTTGCTTTAGCTCTCTGTTCCTCAACTAAATTCTTAAAATAGCTACTTAATTTCT--TTGTTTTTGTTG---TTTTGATGAAAGCA-----------------ATTTAAAGAGTATAGATTTTCTTCTGAGGGAGG-CTTTGCTAGTGTTCTTGAATTTTCTTAACAAGCGAGTTAACCTTTCATTGATTTCTAGAGAGACTTTCAGCTCTTCTTA--A---GTCTCTTTGAATAAGTTAT----TAGGAGAATTTGCAGC--TCCTTGTTATTTATTTGTAATTTTATTATTATTTGTGCTCCTCAATTTAATTCCTCTATTTCCTCT- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1423191 338 - 108792865 ttttaacttctgcatgcattaatttaaccttctcagttacttttgctttagttctctgttccttaactgaattcttaaaatagctacttaattttt--ttgtttttgttg---ttttgatgaaagca-----------------atttaaagagcacagattttcttctgaggaaga-ctttgctgttatgcttgaattttcttaccaaggaagctaacctttcatcaatttctagagagactttaagctctttctaaga---atctctttgaatcagtgat----taggtgagtttgtagc--tccttgctatttatttgcaattttattattatttgcactcttcaatttaaatcccttatttcctcc- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1252265 351 - 7082604 TTTTAACTCCTGCAGGTATTAATTTAACTTTCTCATTTACTTTTGCTTTAGCTCTCTGTTCCTTAACTGAATTCTTAAAATAGCTACTTAATTTCT--TTGTTCTTGTTG---TTTTCATGAAAGCACAGATTTTCATGAAAGCATTTAAAGAGCACAGATTTTCTTCTGAGGAAGG-CTTTGCTGTTACGCTTGAATTTTCTTAACAAGCATGCTAACCTTTCATCAGTTTCTAGAGAGACTTTAAGC----TCTAAGA---ATCTCTTTGAATCAGTGAT----TAGGAGAGCTTGTAGC--TCCTTGCTATTTATTTGCAATTTTATTATTATTTGCACTCTTCAATTTAAACCCCTTATTTCCTCC- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1345974 337 + 1864846 TTTTAACTTCTGCATGTATTAATTTAACTTTCTCATTTACTTTTGCTTTAGCTCTCTGTTCCTTAACTGAATTCTTAAAATAGCTACTTAATTTCT--TTGTTTTTGTTG---TTTTGATGAAAGCA-----------------ATTTAAAGAGCACAGATTTTCTTCTGAGGAAGG-CTTTGCTGTTATGCTTGAATTTTCTTAACAAGCAAGCTAACCTTTCATCAATTTCTAGAGAGACCTTAAGCTCTTTCTAAGA---ACCTCTTTGAATCAGTGAT----TAGGAGAGTTTGTAGC--TCCTTGCTATTTGTTTGCAATTGTATTATTATTTGCACTCTTCAA-TTAAATCCCTTATTTCCTCC- i cebCap1.NW_016107827v1 I 178 I 52 s aotNan1.NW_018513311v1 164464 334 + 287728 TTTTAACTGCTGCATGTAttaatttaactttctcatttacttttgcttttgctCTCCGTTCCTTAACTGAATTCTTAAAATAGCTACTTAATTTCT--TTGTTTTTGTTA---TTTTGATGAAAGCA-----------------ATTTAAAGAGCACAGATTTTCTTCTGAGGAAGG-CTTTGCTGTTGTGCTTGAATTTTCTTAACAAGCAAGCTCACCTTTCATCAATTTCTAGAGAGGCTTTAAGC----TCTAAGA---ACCTCTTTGAATCAGTGAT----TAGGAGAGTTTGTAGC--TCCTTGCTATTTATTTGCAATTTTATTATTATTTGCACGCTTCAATTTAAATCCCTTATTTCCTCC- i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1760421 344 + 4416731 ttctaactgttgtttattctaatttacctttcttggtttcttttgct----------attctttaactaaattcttaaaataactacttactttgttgttatttttactaactttttaatgaaagta-----------------attcaaaggttgtagattttcttcagagaaaagccttcattgttatgcttagattttcttaaactgagatttaatctttctttgatttccaggtagtttttaatttttatAGAAAAAAGGTATCTCTGTACTGAAGATTATCTAGGGAAATTTTTATTCATTCTTACTATTTCCTTCTAATTTTATTTTAATTAGTATTGTTCAATTTAATTCTTCTATTTCCTTAC i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I a score=206571.000000 s hg38.chr2_KI270774v1_alt 157257 27 + 223625 CATTCTTGGGGCCTCTGGGCCTGTAT-A- s panTro5.chr2A 1444160 27 + 111504155 CATTCTTGGGGCCTCTGGGCCTGTAT-A- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1393210 27 + 114371477 CATTCTTGGGGCCTCTGGGCCTGTAT-A- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1417388 27 + 1464242 CATTCTTGGGGCCTCTGGGCCTGTAT-A- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1140240 27 + 81552678 TATTCTTGTGGCCGCTGGGCCTGTAT-A- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1469513 27 + 108979918 TATTCTTGGGGCCGCTGGGCCTGTAT-A- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1441960 27 - 111193037 TATTCTTGGGGCCGCTGGGCCTGTAT-A- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1469939 27 + 3644372 TATTCTTGGGGCCGCTGGGCCTGTAT-A- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1424458 27 - 10304083 TATTCTTGGGGCCGCTGGGCCTGTAT-A- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1501961 27 - 107702431 TATTCTTGGGGCCGCTGGGCCTGTAT-A- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 989939 27 - 2200435 TATTCTTGGGGCCGCTGGGCCTGTAT-A- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1422161 27 - 13651311 TATTCTTGGGGGCTCTGGGCCTGTAT-A- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1423529 25 - 108792865 tattCTTG-GGCTGCTGGGCCTGTAT--- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1252616 25 - 7082604 TGTTCTTG-GGCTGCTGGGCCTGTAT--- i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 164798 26 + 287728 TATTCTTG-GGCTGCTGGGCCTGTATA-- i aotNan1.NW_018513311v1 C 0 I 18 s dasNov3.JH576208 1760765 28 + 4416731 TACTTTTGGGTCTACTTAATTTGTAT-AA i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1346311 52 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I a score=137679.000000 s hg38.chr2_KI270774v1_alt 157284 27 + 223625 TTCTGAAGGGCGTGCACTGAAGTTCCG- s panTro5.chr2A 1444187 27 + 111504155 TTCTGAAGGGCGTGCACTGAAGTTCCG- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1393237 27 + 114371477 TTCTGAAGGGCGTGCACTGAAGTTCCG- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1417415 27 + 1464242 TTCTGAAGGGCATGCACTGAAGTTCCG- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1140267 27 + 81552678 ATCTGAAGAGCGTGCACTGAAGTTCCT- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1469540 27 + 108979918 ATCCGAAGGGCGTGCACTGAAGTTCCC- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1441987 27 - 111193037 ATCCGAAGGGCGTGCACTGAAGTTCCC- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1469966 27 + 3644372 ATCCGAAGGGCGTGCACTGAAGTTCCC- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1424485 27 - 10304083 ATACGAAGGGCGTGCACTGAAGTTCCC- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1501988 27 - 107702431 ATCCGAAGGGCGTGCACTGGAGTTCCT- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 989966 27 - 2200435 ATGCGAAGGGCGTGCACTGAAGTTCCC- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1422188 27 - 13651311 ATCTGAAGGGCATGCACTGAAGTTCCT- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1423554 21 - 108792865 -----AAAACCATGCAGTGAAGGCCC-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1252641 18 - 7082604 -----GA---CATGCAGTGAGGGCCC-- i saiBol1.JH378218 C 0 C 0 s dasNov3.JH576208 1760793 14 + 4416731 --------------CTTTGAAGTTTCCC i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 164824 18 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1346311 52 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I a score=5658.000000 s hg38.chr2_KI270774v1_alt 157311 1 + 223625 G s panTro5.chr2A 1444214 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1393264 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1417442 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1140294 1 + 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1469567 1 + 108979918 G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1442014 1 - 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1469993 1 + 3644372 G i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1424512 1 - 10304083 G i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1502015 1 - 107702431 G i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 989993 1 - 2200435 G i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1422215 1 - 13651311 G i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1423575 1 - 108792865 A i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1252659 1 - 7082604 A i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 164842 1 + 287728 A i aotNan1.NW_018513311v1 I 18 C 0 s dasNov3.JH576208 1760807 1 + 4416731 A i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1346311 52 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I a score=640365.000000 s hg38.chr2_KI270774v1_alt 157312 66 + 223625 CTGTCACGGTTTTCTTGGCTTTCCTACT--CTTTTGCTGAATTTCAGCTCCTC----CCTGGGTTCCCTGCT s panTro5.chr2A 1444215 64 + 111504155 CTGTCACGGTTTTCTTGGCTTTCCTACT--CTT--GCTGAATTTCAGCTCCTC----CCTGGGTTCCCTGCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1393265 66 + 114371477 CTGTCACGGTTTTCTTGGCTTTCCTACT--CTTTTGCTGAATTTCAGCTCCTC----CCTGGGTTCCCTGCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1417443 66 + 1464242 CTGTCACGGTTTTCTTGGCTTTCCTACT--CTTTCGCTGAATTTCAGCTCCTC----ACTGGGTTCCCTGCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1140295 66 + 81552678 CTGTCACAGTTTTCTTGGCTTTCCTACT--CTTTTGCTGAATTTCAGCTCCTG----CCTGGGTTCCCTGCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1469568 66 + 108979918 CTATCATGATTTTCTTGGCTTTCTTACT--CTCTTGCTGAATTTCAGCTCCTG----CCTGGGTTCCCTGCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1442015 66 - 111193037 CTATCATGATTTTCTTGGCTTTCTTACT--CTCTTGCTGAATTTCAGCTCCTG----CCTGGGTTCCCTGCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1469994 66 + 3644372 CTATCATGATTTTCTTGGCTTTCTTACT--CTCTTGCTGAATTTCAGCTCCTG----CCTGGGTTCCCTGCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1424513 66 - 10304083 CTATCGTGATTTTCTTGGCTTTCTTACT--CTCTTGCTGAATTTCAGCTCCTG----CCTGGGTTCCCTGCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1502016 66 - 107702431 CTGTCATGGTTTTCTTGGCTTTCTTATT--CTCTTGCTGAATTTCAGCTCCTG----CCTGGGTTCCCTGCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 989994 66 - 2200435 CTATCGTGATTTTCTTGGCTTTCTTACT--CTCTTGCTGAATTTCAGCTCCTG----CCTGGGTTCCCTGCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1422216 66 - 13651311 CTGTCGTGGTTTTCTTGGCTTTCTTACT--CTCTTGCTGAATTTCAGCTCCTG----CCTGGGTTCCCTGCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1423576 66 - 108792865 CTGTCACACTTTTCCTGCCTTTCCTACT--CTTTTGCTGAATTTCAGCTCCTG----CCTGGGTTCCCTGCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1252660 65 - 7082604 CTCTCACG-GTTTCCTGCCTTTCGTACT--TTTCTGCTGAATTTCGGCTCCTG----CCTGGGTTCCCGGCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1346363 65 + 1864846 CTGTCACG-GTTTCCTGCCTTTCCTACT--CTTTTGCGGAATTTCAGCTCCTG----CCTGAGTTCCCTGCC i cebCap1.NW_016107827v1 I 52 C 0 s aotNan1.NW_018513311v1 164843 66 + 287728 CTGTCACGGTTTTCCTGCCTTTCCTTCT--CTTTTGCTGAATTTCAGCTCCTG----CCTGGGTTCCCTGCC i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1760808 72 + 4416731 CTGTAAGGGACCTCTTGACTTTTCTATTTCTTTTTGCTTTATTTTAGTTGATAAAATTTTAGGTTCCTTACT i dasNov3.JH576208 C 0 I 751 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I a score=71268.000000 s hg38.chr2_KI270774v1_alt 157378 7 + 223625 GGCCCCA s panTro5.chr2A 1444279 7 + 111504155 GGCCCCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1393331 7 + 114371477 GGCCCCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1417509 7 + 1464242 GGCCCCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1140361 7 + 81552678 GGCCACA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1469634 7 + 108979918 GGCCCTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1442081 7 - 111193037 GGCCCTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1470060 7 + 3644372 GGCCCTA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1424579 7 - 10304083 GGCCCTA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1502082 7 - 107702431 GGCCCTA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 990060 7 - 2200435 GGCCCTA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1422282 7 - 13651311 GGCCCTA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1423642 7 - 108792865 GGCCCCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1252725 7 - 7082604 GGCCCCA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1346428 7 + 1864846 GGCCCCA i cebCap1.NW_016107827v1 C 0 I 92 s aotNan1.NW_018513311v1 164909 7 + 287728 GGCCCCA i aotNan1.NW_018513311v1 C 0 I 92 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1760880 751 + 4416731 I a score=393337.000000 s hg38.chr2_KI270774v1_alt 157385 62 + 223625 AGTACTCACCTCGTCTACTCTAAGC----------CTCGCAGGCCTCCCTGA-GGCTCTCAGTGGAAGCGCtt s panTro5.chr2A 1444286 62 + 111504155 AGTCCTCACCTCCTCTACTCTAAGC----------CTCGCAGGCCTCCCTGA-GGCTCTCAGTGGAAGCGCtt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1393338 62 + 114371477 AGTCCTCACCTCCTCTACTCTAAGC----------CTCGCAGGCCTCCCTGA-GGCTCTCAGTGGAAGCGCtt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1417516 62 + 1464242 AGTCCTCACCTCCTCTACTCTAAGC----------CTCGCAGGCCTCCCTGA-GGCTCTCAGTGGAAGCGCtt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1140368 63 + 81552678 AGTTCTCACCTCCTCTACTCTGAGC----------CTCGCAGGCCTCCCTGAGGGCTCTCAGTGGAAGCGCtt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1469641 63 + 108979918 AGTTCTCACATCCTCTGCTCTGAGC----------CTTGCAGGCCTCCCTAAGGGCTCTCAGTAGAAGCGCTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1442088 63 - 111193037 AGTTCTCACATCCTCTGCTCTGAGC----------CTTGCAGGCCTCCCTAAGGGCTCTCAGTAGAAGCGCTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1470067 63 + 3644372 AGTTCTCACATCCTCTGCTCTGAGC----------CTTGCAGGCCTCCCTAAGGGCTCTCAGTAGAAGCGCTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1424586 61 - 10304083 AGTTCTCACATCCTCTGCTCTGAGC----------CTTGCAGGCCTCCCTGAGGGCTCTCAGTGAAAGAGC-- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1502089 63 - 107702431 AGTTCTCACATCCTCTGCTCTGAGC----------CTTGCAGGCCTCCCTAAGGGCTCTCAGTGGAAGCGCtt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 990067 63 - 2200435 AGTTCTCACATCCTCTGCTCTGAGC----------CTTGCAGGCCTCCCTGAGGGCTCTCAGTGGAAGCGctt i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1422289 63 - 13651311 AGTTCTCTCGTCCTCTGCTCTGAGC----------CTTGCAGGCCTCCCTGAGGGCTCTCAGTGGAAGCACtt i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1423649 71 - 108792865 CATTCTCAGCTCCTCTGCTCTGACCTGCAATTGAGCCAGCAGGCCTCT--GAGGGCTCTCAGTGGAAGCACTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1252732 70 - 7082604 CATTCTCAGCTCCTCGGCTCTGACCTACAGTGGAGCCAGCAGGCCTGC--GAGGGC-CTCAGTGGAAGCGCTT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 164916 92 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1346435 92 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1760880 751 + 4416731 I a score=16096.000000 s hg38.chr2_KI270774v1_alt 157447 8 + 223625 ttttt-----------ttt s panTro5.chr2A 1444348 8 + 111504155 ttttt-----------ttt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1393400 8 + 114371477 ttttt-----------ttt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1417578 8 + 1464242 ttttt-----------ttt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1140431 8 + 81552678 ttttt-----------ttt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1469704 16 + 108979918 Ttttt---ttttctttttc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1442151 16 - 111193037 Ttttt---ttttctttttc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1470130 16 + 3644372 Ttttt---ttttctttttc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1424647 15 - 10304083 -tttt---ttttcttttct i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1502152 6 - 107702431 ttttt-------------t i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 990130 19 - 2200435 tttttttcttttcttttct i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1422352 5 - 13651311 ttttt-------------- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1423720 8 - 108792865 TTTTT-----------TCT i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 164916 92 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1252802 0 - 7082604 C e cebCap1.NW_016107827v1 1346435 92 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1760880 751 + 4416731 I a score=202201.000000 s hg38.chr2_KI270774v1_alt 157455 52 + 223625 tctttttt-cttttttttgagacggaatctcgctctgtcacccaggcaggagt s panTro5.chr2A 1444356 50 + 111504155 tttccttt---tttttttgagatggaatctcgctctgtcgcccaggctggagt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1393408 47 + 114371477 tcctt------tttttttgagatggaatctcgctctgttgcccaggcaggagt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1417586 36 + 1464242 tttctttt---tttttttgagacggaatctcgctctgtc-------------- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1140439 53 + 81552678 tttttttttttttttttttttttggagtcttgctctgtggcccaggctggagt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1469720 50 + 108979918 tttctttt---ctcttttgagacagagtcttgcactgtcacccaggctggagt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1442167 50 - 111193037 tttctttt---ctcttttgagacagagtcttgcactgtcacccaggctggagt i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1470146 50 + 3644372 tttctttt---ctcttttaagacagagtcttgcactgtcacccaggctggagt i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1424662 50 - 10304083 tttctttt---ctcttttgagacagagtcttgcactgtcacccaggctggagt i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1502158 50 - 107702431 tttctttt---cttttttgagatggagtcttgcacagtcacccaggctggcgt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 990149 50 - 2200435 tttctttt---ctCttttgagacagagtcttgcactgtcacccaggctggagt i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1422357 49 - 13651311 -ttctttt---cttttttgagatagagtctcgcactgtcacccaggctggagt i colAng1.NW_012118821v1 C 0 M 2125 e aotNan1.NW_018513311v1 164916 92 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1252802 0 - 7082604 C e cebCap1.NW_016107827v1 1346435 92 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1760880 751 + 4416731 I e calJac3.chr14 1423728 0 - 108792865 C a score=1060666.000000 s hg38.chr2_KI270774v1_alt 157507 286 + 223625 acagtggcccaatctcggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggtgcccgccaccgcgcccggctaattttttgtattttaagtagagacggggtttcactgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccacctcggcctcccaaattgctgggcgcccacctcagcctcccaaagtgctgggattacaggcgtgagcccccgcgcccggccGGAAGCGC-TTG s panTro5.chr2A 1444406 257 + 111504155 gcagtggcgtgatctcggctcactgcaagctccgcctcacgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcccccgccaccacgcccaggtaattttttgtattttaagtagagacggcctttcaccttgttagccaggatggtcttgatctcctgacctcgtgatccgcccccctcggcctcccaaa-----------------------------gtgctgggattacaggcgtgagcccccgcgcccggccGGAAGCCC-TTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1393455 257 + 114371477 acagtggcccaatctcggctcactgcaagctccgcctcccgggttcacgccattctcccgcctcagcctcccgagtagctgggactacaggcacccgtcaccacgcccggctaattttttgtattttaagtagagacggggtttcaccgtgttagccaggatggtctcgatctgctgacctcgtgatccgcccacctcagcctcccaaa-----------------------------gtgctgggattacaggcgtgagcccccgcgcccggccGGAAGCGC-TTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1417622 283 + 1464242 ---gtggcccaatctcggctcactgcaagctccgcctcccgggttcacgccattctcccgcctcagcctcccgagtagctgggactacaggcgccggccaccacgcccggctaattttttgtattttaagtagagacggggtttcaccgtgttagccgggatggtctcgatctcctgacctcgtgatccgcccacctcggcctcccaaattgctgggcgcccacctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggccGGAAGCGC-TTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1140492 285 + 81552678 acagtggcccaatctcggctcactgcaagctccgcctc-cgggttcatgccattctcctgcctcggcctcccgagtagctgggactacaagcgcccaccaccacgcccggacaattttttgtatttttagtagagatggggtttcaccgtgttagccaggatggtcttgatctcctgacctcatgatccgcccacctcggcctcccaaagtgctgggcgcccacctcagcctcccaaagtgctgggattacaggcgtgagccaccatgcccagccAGAAGCGC-TTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1469770 253 + 108979918 gccgtggtgtgatctcagctcactgcaagctccacatcctgggttcacaccattctcctgcctcagcctcccgagtagctgggactacaagtgcccaccagcatgcccggctaattttttg-----ttagtagagatgggggttcaccgtgttagctaggatggtctcgatctcatgacctcgtgatctgctcaccttggcctcccaaa-----------------------------gtgctggggttacaggcgtaagccaccttgcccagcTGGAAGTGCATTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1442217 253 - 111193037 gccgtggtgtgatctcagctcactgcaagctccacatcctgggttcacaccattctcctgcctcagcctcccgagtagctgggactacaagtgcccaccagcatgcccggctaattttttg-----ttagtagagatgggggttcaccgtgttagctaggatggtctcgatctcatgacctcgtaatctgctcaccttggcctcccaaa-----------------------------gtgctggggttacaggcgtgagccaccttgcccagcTGGAAGTGCATTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1470196 253 + 3644372 gccgtggtgtgatctcagctcactgcaagttccacatcctgggttcacaccattctcctgcctcagcctcctgagtagctgggactacaagtgcccaccagcacgcctggctaattttttg-----ttagtagagatggggtttcaccgtgttagctaggatggtctcgatctcatgacctcgtgatctgctcaacttggcctcccaaa-----------------------------gtgctggggttacaggcgtaagccaccttgcccagcTGGAAGTGCATTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1424712 253 - 10304083 gccgtggtgtgatctcagctcactgcaagctccacatcctgggttcacaccattctcctgcctcagcctcccgagtagctgggactacaagtgcccaccaccatgcccggctaattttttg-----ttagtagagatggggtttcaccgtgttagctagaatggtctcgatctcatgacctcgtgatctgctcaccttggcctcccaaa-----------------------------gtgctggggttacaggcgtaagccaccttgcccagcTGGAAGTGCATTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1502208 253 - 107702431 gccgtggtgtgatctcagctcactgcaagctccacatcctgggttcacaccattctcctgcctcagcctcccgagtagctgggactacaagtgcccaccaccatgcccggctaattttttg-----ttagtagagatggggtttcaccgtgttagccaagatggtctcgatctcatgacctcgtgatctgcccacctcggcctcccaaa-----------------------------gtgctgggattacaggcgtaagccaccttgcccagcTGGAAGTGCATTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 990199 235 - 2200435 gccgtggtgtgatctcagctcactgcgagctccacatcctgggttcacaccattctcctgcctcagcctcccgagtagctgggactacaagtgcccaccaccatgcccggctaattttttg-----ttagtagagatggggtttcaccgtgttagctaggatggtctctatctcatgacctcgtgatctgctcaccttggcctcccaaa-----------------------------gtgctggggttacaggcgtaagccaccttgc------------------ i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 164916 92 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1252802 0 - 7082604 C e cebCap1.NW_016107827v1 1346435 92 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1760880 751 + 4416731 I e calJac3.chr14 1423728 0 - 108792865 C e colAng1.NW_012118821v1 1422406 2125 - 13651311 M a score=20020.000000 s hg38.chr2_KI270774v1_alt 157793 4 + 223625 TTTA s panTro5.chr2A 1444663 4 + 111504155 TTTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1393712 4 + 114371477 TTTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1417905 4 + 1464242 TTTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1140777 4 + 81552678 TTTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1470023 4 + 108979918 TTTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1442470 4 - 111193037 TTTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1470449 4 + 3644372 TTTA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1424965 4 - 10304083 TTTA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1502461 4 - 107702431 TTTA i chlSab2.chr14 C 0 C 0 s saiBol1.JH378218 1252802 4 - 7082604 TTTA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 164916 92 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1346435 92 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1760880 751 + 4416731 I e calJac3.chr14 1423728 0 - 108792865 C e colAng1.NW_012118821v1 1422406 2125 - 13651311 M e manLeu1.NW_012103754v1 990434 0 - 2200435 C a score=66678.000000 s hg38.chr2_KI270774v1_alt 157797 24 + 223625 ATGCACGATCTTTTTTAACGTGGA s panTro5.chr2A 1444667 24 + 111504155 ATGCATGACCTTTTTAAATGTGGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1393716 24 + 114371477 ATGCATGACCTTTTTAAATGTGGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1417909 23 + 1464242 ATGCATGACCTTTTTC-ATGTGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1140781 16 + 81552678 ATGCATGACCT--------GTGGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1470027 16 + 108979918 ATGCACGACCT--------GTGGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1442474 16 - 111193037 ATGCACGACCT--------GTGGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1470453 16 + 3644372 ATGCACGACCT--------GTGGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1424969 16 - 10304083 ATGCACGACCT--------GTGGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1502465 16 - 107702431 ATGCACGACCT--------GTGGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 990434 8 - 2200435 --------ccT--------GTGGA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1423728 16 - 108792865 AAGCATGACCT--------GTAGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1252806 16 - 7082604 AAGCATGACCT--------GTAGG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 164916 92 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1346435 92 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1760880 751 + 4416731 I e colAng1.NW_012118821v1 1422406 2125 - 13651311 M a score=729354.000000 s hg38.chr2_KI270774v1_alt 157821 97 + 223625 CCCTGTGCTGGCTCTGAGCCAAGGCTGGGGCCTCGTTGCTG-------CCCCGACCCCCAGCTGGCCTTGGGCTGCACAGCTGCCAGGCCTGGGCGCTGCCCAG s panTro5.chr2A 1444691 97 + 111504155 CCCTGTGCTGGCTCTGAGCCAAGGCTAGGGCCTCGTCGCTG-------CCCCAACCCCCAGCTGGCCTTGGGCTGCACAGCTGCCAGGCCTGGGTGCTGCCCAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1393740 97 + 114371477 CCCTGTGCTGGCTCTGAGCCAAGGCTGGGGCCTCGTCGCTG-------CCCCAACCCCCAGCTGGCCTTGGGCTGCACAGCTGCCAGGCCTAGGCGCTGCCCAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1417932 97 + 1464242 CCCTGTGCTGGCTCTGAGCCAGGGCTGGGGCCTCGTCGCTG-------CCCCGACCCCCAGCTGGCCTTGGGCTGCACAGCTGCCAGGCCTGGGCGCTGCCCAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1140797 97 + 81552678 CCCTGTGCTGGCTCTGAGCCAGGGCTGGGGCGTCCTCGCTG-------CCCCGACCCCCAGCTGGCCTTGGGCTGCACAGCTGCCAGGCCTGGGCGCTGCCCAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1470043 104 + 108979918 TCCTGTGCTGTCTCTGAACCAGGGCTGGGGCGTCCTCGCTGCCCCCACCCCCCACCCCCACCTGGCCTTGGGCTGCACGGCTGCCAGGCCAGGGTGCTGCCCAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1442490 104 - 111193037 TCCTGTGCTGTCTCTGAACCAGGGCTGGGGCGTCCTCGCTGCCCCCACCCCCCACCCCCACCTGGCCTTGGGCTGCACGGCTGCCAGGCCAGGGTGCTGCCCAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1470469 104 + 3644372 TCCTGTGCTGTCTCTGAACCAGGGCTGGGGCGTCCTCGCTGCCCCCACCCCCCACCCCCACCTGGCCTTGGGCTGCACGGCTGCCAGGCCAGGGTGCTGCCCAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1424985 97 - 10304083 TCCTGTGCTGTCTCTGAACCAGGGCTGGGGCGTCCTTGCTG-------CCCCCACCCCCACCTGGCCTTGGGCTGCACAGCTGCCAGGCCAGGGTGCTGCCCAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1502481 97 - 107702431 TCCTGTGCTGTCTCTGAACCAGGGCTGGGGCATCCTCGCTG-------CCCCAACCCCCAGCTGGCCTTGGGCTGCACAGCTGCCAGGCCAGGGCGCTGCCCAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 990442 97 - 2200435 TCCTGTGCTGTCTCTGAACCAGGGCTGGGGCGTCCTCGCTG-------CCCCCACCCCCAGCTGGCCTTGGGCTGCACAGCTGCCAGGCCAGGGTGCTGCCCAG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1423744 93 - 108792865 CCCTGTGCTGGCTCTGAGCCAGGGTGGGGGCGTCTTTGCTG-------CCCCGACTGCCAG--GACCTTGGACTGCAAAGCTG-CAGGCCAGGG-ACTGCCCAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1252822 91 - 7082604 CCC--TGCTGGCTCTGAGCCAGGGCTGGGG-GTCTTTGCTG-------CCCCGACCCCCAGCTGACCTTGGGTT-CACAGCTG-CAGGCCAGGG-GCTGCCCAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1346527 92 + 1864846 CCCTGTGCTGGCTCTGAGCCAGGGCTGAGG-GTCTTTGCTG-------CCCCGACC-CCAGCTGACCTTGGGCT-CACAGCTG-CAGGCCAGGA-GCTGCCCAG i cebCap1.NW_016107827v1 I 92 C 0 s aotNan1.NW_018513311v1 165008 94 + 287728 CCCTGTGCTGGCTCTGAGCCAGGGCTGGGGCGTCTTTGGTG-------CCCCGACCCCCAGCTGACCTTGGGCT-CACAGCTG-CAGGCCAGGG-GCTGCCCAG i aotNan1.NW_018513311v1 I 92 C 0 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1760880 751 + 4416731 I e colAng1.NW_012118821v1 1422406 2125 - 13651311 M a score=364054.000000 s hg38.chr2_KI270774v1_alt 157918 43 + 223625 AGGGGTTCTGACAGCATCTGCTTTGCTGCTT-----CACCACAAGGCC s panTro5.chr2A 1444788 43 + 111504155 AGGGGTTCTGACAGCATCTGCTTTGCTGCTT-----CACCACAAGGCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1393837 43 + 114371477 AGGGGTTCTGACAGCATCTGCTTTGCTGCTT-----CACCACAAGGCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1418029 43 + 1464242 AGGGGTTCTGACAGCATCTGCTTTGCTGCTT-----CACCACAAGGCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1140894 43 + 81552678 AGGGGTTCTGACGGCCTCTGCTTTGCTGCTT-----CACCACAAGGCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1470147 43 + 108979918 AGGGGTTCTCACAGCATCTGCTTTGCTGCTT-----CACCACAAGGCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1442594 43 - 111193037 AGGGGTTCTCACAGCATCTGCTTTGCTGCTT-----CACCACAAGGCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1470573 43 + 3644372 AGGGGTTCTCACAGCATCTGCTCTGCTGCTT-----CACCACAAGGCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1425082 43 - 10304083 AGGGGTTCTCACAGCATCTGCTTTGCTGCTT-----CACCACAAGGCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1502578 43 - 107702431 AGGGGTTGTCATGGCACCTGCTTTGCTGCTT-----CACCACAAGGCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 990539 43 - 2200435 AGGGGTTCTCACGGCATCTGCTTTGCTGCTT-----CACCACAAGGCT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1423837 43 - 108792865 ACCGGTTCTAAGGGCATCTGCTTTGCTGCTT-----CACCACTAGGCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1252913 43 - 7082604 ACGGGATCTGAGGGCACCCGCTTGGCTGCTT-----CGCCCCTCGGCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1346619 42 + 1864846 ACGGGTTCTGA-GGCATCCACTTTGCTGCTT-----CACCACTCGGCC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 165102 43 + 287728 ACGGGTTCTGAGGGCATCCGCTTTGCTGCTT-----CACCACTAGGCC i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1761631 48 + 4416731 AGGAGTGCTGAGGGCATCTGCTTTGCTGCTTTTAACTATTACAATGCC i dasNov3.JH576208 I 751 I 1918 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e colAng1.NW_012118821v1 1422406 2125 - 13651311 M a score=563084.000000 s hg38.chr2_KI270774v1_alt 157961 76 + 223625 GACTCCCTCTCACCTACATTCTTTCTGCTGCACCTCCTGTGCCTGGGTCCATCAGGAGCTCGGCCTGTCTCCCT----------GC s panTro5.chr2A 1444831 76 + 111504155 GACTCCCTCTCACCTGCATTCTTTCTCCTGCACCTCCTGTGCCTGGGTCCATCAGGAGCTCGGCCTGTCTCCCT----------GC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1393880 76 + 114371477 GACTCCCTCTCACCTGCATTCTTTCTCCTGCACCTCCTGTGCCTGGGTCCATCAGGAGCTTGGCCTGTCTCCCT----------GC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1418072 86 + 1464242 GACTCCCTCTCACCTGCATTCTTTCTGCTGCACCTCCTGTGCCTGGGTCCATCAGGAGCTCGGCCTGTCTCCCTgcaccgcaccgc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1140937 76 + 81552678 GACTCCCTCTCACCTACATTCTTTCCGCTGCACCTCCTGTGCCTGAGTCCACCAGGAGCTCGGCCTGTCTCCCT----------GC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1470190 76 + 108979918 GACTCCCTGTCACCTGCATTCTTTTCACTGCACCTCCTGTGCCTGAGTCCATCAGGGGCTGGGCCTGTCTCCCT----------GC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1442637 76 - 111193037 GACTCCCTGTCACCTGCATTCTTTTCACTGCACCTCCTGTGCCTGAGTCCATCAGGGGCTGGGCCTGTCTCCCT----------GC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1470616 76 + 3644372 GACTCCCTGTCACCTGCATTCTTTTCACTGCACCTCCTGTGCCTGAGTCCATCAGGGGCTGGGCCTGTCTCCCT----------GC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1425125 76 - 10304083 GACTCCCTGTCACCTGCATTCTTTTCACTGCACCTCCTGTGCCTGAGTCCATCAGGGGCTGGGCCTGTCTCCCT----------GC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1502621 76 - 107702431 GACTCCCTGTCGCCTGCATTCTTTCCACTGCACCTCCTGTGCCTGAGTCCATCAGGAGCTCGGCCTGTCTCCCT----------GA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 990582 76 - 2200435 GACTCCCTGTCACCTGCATTCTTTCCACTGCACCTCCTGTGCCTGAGTCCATCAGGAGCTCGGCCTGTCTCCCT----------GC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1423880 75 - 108792865 AGCTCCCCC-CACCCACATTCTCTCCGCTGCACCTCCCGTGCGTGAGTCCACCCGGAGCTCCTCCTGTCTCCCT----------GC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1252956 71 - 7082604 GACTCCCCCTCAGCCACATTCTCTCCGCGGCACCTCCCGTGCGCGAGTCCAGCCGGAGCTCCTCCTGTATC--------------- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1346661 75 + 1864846 AACTCCCCCTCACTGACATTCTTTCCACGGCACCTCCC-TGCCTGAGGCCAGCCGGAGCTCCTCCTGTCTCCCT----------GC i cebCap1.NW_016107827v1 C 0 I 74 s aotNan1.NW_018513311v1 165145 76 + 287728 AACTCCCCCTCACCCACATTCTCTCTGCTGCACCTCCCGTGCCTGAGTCCACCCTGAGCTCCTCCCGTCTCCCT----------GC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1761679 1918 + 4416731 I e colAng1.NW_012118821v1 1422406 2125 - 13651311 M a score=52009.000000 s hg38.chr2_KI270774v1_alt 158037 16 + 223625 ACCGCACGGCACCGAG s panTro5.chr2A 1444907 16 + 111504155 ACCGCACGGCACCGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1393956 16 + 114371477 ACCGCACGGCACCGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1418158 16 + 1464242 accgcaccgcaccgAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1141013 16 + 81552678 ACCGCGCTGCACGGAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1470266 16 + 108979918 ACAGCACTGCATGCCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1442713 16 - 111193037 ACAGCACTGCATGCCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1470692 16 + 3644372 ACAGCACTGCATGCCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1425201 16 - 10304083 ACAGCACTGCATGCCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1502697 16 - 107702431 ACAGCACTGCATGGGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 990658 16 - 2200435 ACAGCACTGCATGGGG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1423955 16 - 108792865 GCAGCTCTGCAGGGAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1253027 4 - 7082604 ------CTGC------ i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 165221 16 + 287728 GCAGCTCTGCAAGGAG i aotNan1.NW_018513311v1 C 0 I 40 e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1346736 74 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1761679 1918 + 4416731 I e colAng1.NW_012118821v1 1422406 2125 - 13651311 M a score=250745.000000 s hg38.chr2_KI270774v1_alt 158053 53 + 223625 CGGCCAACCCCTGAG------CGGCTGCTGGCTCGCTGGCCGCATTTCCCTAATGCAGC s panTro5.chr2A 1444923 53 + 111504155 CGGCTAACCCCTGAG------CGGCTGCTGGCTCGCTGGCCGCATTTCCCTAATTGACC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1393972 53 + 114371477 CGGCTAACCCCTGAG------CGGCTGCTGGCTCGCTGGCCGCATTTCCCTAATTGACC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1418174 53 + 1464242 CGGCGAACCCCTGAG------CGGCTGCTGGCTCGCTGGCCGCATTTCCCTAATTGACC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1141029 53 + 81552678 CGGCTAAGCCCTGAA------CAGCTGCTGGCTCGCTGGGCGCATTTCCCTAATTGACC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1470282 53 + 108979918 CGGCTAACTCCTGAG------TGGCTGCTGCCTCGCTGGGTGCATTCCCCCACGTGACC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1442729 53 - 111193037 CGGCTAACTCCTGAG------TGGCTGCTGCCTCGCTGGGTGCATTCCCCCACGTGACC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1470708 53 + 3644372 CGGCTAACTCCTGAG------TGGCTGCTGCCTCGCTGGGTGCATTCCCCCACGTGACC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1425217 53 - 10304083 GGGCTAACTCCCGAG------TGGCTGCTGTCTCGCTGGGTGCATTTCCCCACGTGACC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1502713 53 - 107702431 CGGCTAACTCCTGAG------TGGCTGCTGCCTTGCTGGGTGCATTCCCCTACTTGACC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 990674 53 - 2200435 CGGCTAACTCCCGAG------TGGCTGCTGCCTCGCTGGGTGCATTCCCCCACGTGACC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1423971 58 - 108792865 -GGCTAACTCCAGGAGCGGGTGGGCTGCAGGCTGGCTGGGCGCACTCCCCGTCCTGACT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1253031 50 - 7082604 ---------TCAGAAGCAGATGGGCTGCAGGCTGGCTGGGCGCACTCCCTCACCTGCCT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 165237 40 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1346736 74 + 1864846 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1761679 1918 + 4416731 I e colAng1.NW_012118821v1 1422406 2125 - 13651311 M a score=9100.000000 s hg38.chr2_KI270774v1_alt 158106 1 + 223625 C s panTro5.chr2A 1444976 1 + 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1394025 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1418227 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1141082 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1470335 1 + 108979918 C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1442782 1 - 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1470761 1 + 3644372 C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1425270 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1502766 1 - 107702431 C i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 990727 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1424029 1 - 108792865 C i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1253081 1 - 7082604 C i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1346810 1 + 1864846 C i cebCap1.NW_016107827v1 I 74 C 0 e aotNan1.NW_018513311v1 165237 40 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1761679 1918 + 4416731 I e colAng1.NW_012118821v1 1422406 2125 - 13651311 M a score=285440.000000 s hg38.chr2_KI270774v1_alt 158107 37 + 223625 CAGGTCT----TCCGTTCCTTCCTACTCCTCAGTGCCCAGG s panTro5.chr2A 1444977 37 + 111504155 CAGGTCT----TCTGTTCCTTCCTACTCCTCAGTGCCCAGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1394026 37 + 114371477 CAGGTCT----TCTGTTCCTTCCTACTCCTCAGTGCCCAGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1418228 37 + 1464242 CAGGTCT----TCTGTTCCTTCCTACTCCTCAGTGCCCAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1141083 37 + 81552678 CAGGTCT----TCTGTTCCTTCCTCCTCCTCAGTGCCCGGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1470336 37 + 108979918 CAGGTCC----TCTGTTCCTTCCTACTCCTCAGTGCCTGGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1442783 37 - 111193037 CAGGTCC----TCTGTTCCTTCCTACTCCTCAGTGCCTGGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1470762 37 + 3644372 CAGGTCC----TCTGTTCCTTCCTACTCCTCAGTGCCTGGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1425271 37 - 10304083 CAGGTCC----TCTGCTCCTTCCTACTCCTCAGTGCCTGGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1502767 37 - 107702431 CAGGTCC----TCTGTTCCTTCCTACTCCTCAGTGCCTGGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 990728 37 - 2200435 CAGGTCC----TCTGTTCCTTCCTACTCCTCAGTGCCTGGG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1424030 37 - 108792865 CAGGTCA----TCTGTTCTTCCCTGATCCTTGGGGCCTGGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1253082 41 - 7082604 CAGGTCATCTGTCTGTTCTTCCCTAATCCTTGGGGCCAGGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1346811 37 + 1864846 CAGGTCA----TCTGTTCTTCCCTAATCCTTGGGGCCCGGG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 165277 37 + 287728 CAGGTCA----CCTGCTCTTCCCTAACCCTTGGGGCCTGGG i aotNan1.NW_018513311v1 I 40 C 0 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e dasNov3.JH576208 1761679 1918 + 4416731 I e colAng1.NW_012118821v1 1422406 2125 - 13651311 M a score=78549.000000 s hg38.chr2_KI270774v1_alt 158144 9 + 223625 CTGCACTTT s panTro5.chr2A 1445014 9 + 111504155 CTGCACTTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1394063 9 + 114371477 CTGCACTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1418265 9 + 1464242 CTGCACTTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1141120 9 + 81552678 CCGCGCTTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1470373 9 + 108979918 CTGCGCTTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1442820 9 - 111193037 CTGCGCTTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1470799 9 + 3644372 CTGCGCTTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1425308 9 - 10304083 CTGCGCTTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1502804 9 - 107702431 CTGTGCTTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 990765 9 - 2200435 CTGCGCTTT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1424067 9 - 108792865 CTGCACTTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1253123 9 - 7082604 CGGCACTTT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1346848 9 + 1864846 CTGCACTTT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 165314 9 + 287728 CTGCACTTT i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1763597 9 + 4416731 CTCCACAAT i dasNov3.JH576208 I 1918 C 0 e mm10.chr12 90025229 193 - 120129022 I e otoGar3.GL873658 945012 831 + 5252280 I e colAng1.NW_012118821v1 1422406 2125 - 13651311 M a score=1617522.000000 s hg38.chr2_KI270774v1_alt 158153 200 + 223625 GCCCCGAGAGGAGCTTTCCCCTTATTTTCACTGGTAAT-AATAATGTCCTA---TTACGAGAAGACCGTGATCTTCAGGAAGAGT--CTCTTTCGGAATCTGTCCAACCCCGGTGATCTTGTGATTCTGGATGAGCGATTTAACCT-C-CTAAATC---------------TGATAAC-------------------------------------------------------------GCCC--------AGGGTAGGCCCTGACCCCGTGACACCTCAC--CAGGGAGGAAG s panTro5.chr2A 1445023 200 + 111504155 GCCCCGAGAGGAGCTTTCCCCTTATTTTCACTGGTAAT-AATAATGTCCTA---TTACGAGAAGACCGTGATCTTCAGGAAGAGT--CTCTTTCGGAATCTGGCCAACCCCGGTGATCTTGTGATTCTGGATGAGCGATTTAACCT-C-CTAAATC---------------TGATAAC-------------------------------------------------------------GCCC--------AGGGTAGGCCCTGACCCCGTGACACCTCCC--CAGGGAGGAAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1394072 200 + 114371477 GCCCCGAGAGGAGCTTTCCCCTTATTTTCACTGGTAAT-AATAATGTCCTA---TTACGAGAAGACCGTGATCTTCAGGAAGAGT--CTCTTTCGGAATCTGTCCAACCCCGGTGATCTTGTGATTCTGGATGAGCGATTTAACCT-C-CTAAATC---------------TGATAAC-------------------------------------------------------------GCCC--------AGGGTAGGCCCTGACCCCGTGACACCTCCC--CAGGGAGGAAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1418274 200 + 1464242 GCCCCGAGAGGAGCTTTCCCCTTATTTTCACTGGTAAT-AATAATGTCCTA---TTACCAGAAGACCGTGATCTTCAGGAAGAGT--CTCTTTCGGAATCTGTCCAACCCCGGTGATCTTGTGATTCTGGATGAGCGATTTAACCT-C-CTAAATC---------------TGATAAC-------------------------------------------------------------GCCC--------AGGGTAGGGCCTGACCCCGTGACACCTCCC--CAGGGAGGAAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1141129 200 + 81552678 GCCCCAAGAGGAGCTTTTCCCTTATTTTCACTGGGAAT-AATAATGTCCTA---TTACGAGAAGACCCTGATCTTCAGGAAGAGT--CTCTTTCGGGGTCTGTCCAACCCCGGCGATCTTGTGATTCTGGACGAGCGATTTAACCT-C-TTAAATC---------------AGATAAC-------------------------------------------------------------GCCC--------AGGGTAGGCCCTGACCCCGTGACAACTCCC--CAGGGAGGAAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1470382 200 + 108979918 GCCCTGAGAGGAACTTTTCCCTTATTTTCACTGGTAAA-AATAATGTCCTA---TTACAAGAAGACCATGATCTTCAGGAAGAGT--CTCTTTCGGGGTCTGTCCAACCTGGTCGATCTTGTGATTCTGGATGAGCGATTTAACCT-C-CTAAATC---------------TAATAAC-------------------------------------------------------------ACCC--------AGAGTAAGCCCTGACCCTGTGACACCTCCC--CAGGGAGGAAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1442829 200 - 111193037 GCCCTGAGAGGAACTTTTCCCTTATTTTCACTGGTAAA-AATAATGTCCTA---TTACAAGAAGACCATGATCTTCAGGAAGAGT--CTCTTTCGGGGTCTGTCCAACCTGGTCGATCTTGTGATTCTGGATGAGCGATTTAACCT-C-CTAAATC---------------TAATAAC-------------------------------------------------------------ACCC--------AGAGTAAGCCCTGACCCTGTGACACCTCCC--CAGGGAGGAAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1470808 200 + 3644372 GCCCTGAGAGGAACTTTTCCCTTATTTTCACTGGTAAA-AATAATGTCCTA---TTACAAGAAGACCATGATCTTCAGGAAGAGT--CTCTTTCGGGGTCTGTCCAACCTGGTCGATCTTGTGATTCTGGATGAGCGATTTAACCT-C-CTAAATC---------------TAATAAC-------------------------------------------------------------ACCC--------AGAGTAAGCCCTGACCCTGTGACACCTCCC--CAGGGAGGAAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1425317 200 - 10304083 GCCCTGAGAGGAACTTTTCCGTTGTTTTCACTGGTAAA-AATAATGTCCTA---TTACAAGAAGACCATGATCTTCAGGAAGAGT--CTCTTTCGGGGTCTGTCCAACCCGGTCGATCTTGTGATTCTGGATGAGCGATTTAACCT-C-CTAAATC---------------TAATAAC-------------------------------------------------------------ACCC--------AGAGTAGGCCCTGACCCTGTGACACCTCCC--CAGGGAGGAAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1502813 200 - 107702431 GCCCTGAGAAGAGCTTTTCCCTTATTTTCACTGGTAAA-AATAATGTCCTA---TTATAAGAAGACCATGATCCTCAGGAAGAGT--CTCTTTCGGGGTCCGTCCAACCCGGTCGATCTTGTGATTCTGGATGAGCGATTTAACCT-C-CTAAATC---------------TAATAAC-------------------------------------------------------------ACCC--------AGAGTAAGCCCTGGCCCTGTGACACCTCCC--CAGGGAGGAAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 990774 200 - 2200435 GCCCTGAGAGGAGCTTTTCCCTTATTTTCACTGGTAAA-AATAATGTCCTA---TTACAAGAAGACCATGATCTTCAGGAAGAGT--CTCTTTCGGGGTCTGTCCAACCCGGTCGATCTTGTGATTCTGGATGAGCGATTTAACCT-C-CTAAATC---------------TAATAAC-------------------------------------------------------------ACCC--------AGAGTAGGCCCTGACCCTGTGACACCTCCC--CAGGGAGGAAG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1424076 196 - 108792865 GCCCTGAGAGGCGCTTTTCCCTTATTTTCACTGGT----AATAATGTCTTA---TGATGAGAAGGCAGAGATCTTCAGGAAGGGTGCCTCTTTCGGGGTCTGTCGAAAACTGGCGATC-TGTGATTCTGGAATTGCTGTTTAACCC-C-TTAAATC---------------TGATAAG-------------------------------------------------------------GCCC--------AGGGTAGGCCCTG-CCCCGTGAC-CCTCCC--CAGGAAGGAAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1253132 196 - 7082604 GCCCTGAGAGGCGCTTTTCCCTTATTTTCACTGGT----AATTATGTCTTG---TGATGAGAAGGCAGACATCTTCAGGAAGGGTGTCTCTTTCGGGGTCTGTCCAAAACCGGCGATC-TGTGATTCTGGAATTGCTATTTAACCC-C-TTAAATC---------------TGATGAG-------------------------------------------------------------GCCC--------AGGGTAGGCCCTG-CCCCGTGAC-CCTCCC--CAGGAAGGAAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1346857 196 + 1864846 GCCCTGAGAGGCGCTTTTCCCTTATTTTCACTGGT----AATAATGTCTTA---TGATGAGAAGGCAGAGATCTTCAGGAAGGGTGTATCTTTCGGGGTCTGTCCAAAACCAGCGATC-TGTGATTCTGGAATTGCTGTTTAACCC-C-TTAAATC---------------TGATAAG-------------------------------------------------------------GCCC--------AGGGTAGGCCCTG-CCCCGTGAC-CCTCCC--CAGGAAGGAAG i cebCap1.NW_016107827v1 C 0 I 6 s aotNan1.NW_018513311v1 165323 196 + 287728 GCCCTGGGAGGCGCTTTCCCCTTCTTTTCACTGGT----AATAATGTCTTA---TGATGAGAAGGCAGAGATCTTCAGGAAGGGTGTTTCTTTCGGGGTCTGTCCAAAACCGGCGACC-TGTGATTCTGGAATTGCTGTTTAACCC-C-TTAAATC---------------TGATAAG-------------------------------------------------------------GCCC--------AGGGTAGGCCCTG-CCCCGTGGC-CCTCCC--CAGGAAGGAAG i aotNan1.NW_018513311v1 C 0 I 59 s otoGar3.GL873658 945843 230 + 5252280 GCCCTCCAAGGGGCCATCTGCTCTTTCTCATTATCACTCAATAATGTCGAAACCTCATGAGAAGACAGTGATTTTTAGTAAGAGCTTTTCTTTTGGAGTCTGTCCAACCACTATGGTCTTGTGGCCTTGGCCCAGCTACTTAACCTCC-CTAGATCTCAAACTCAAGGTGATGAGGAG-------------------------------------------------------------ACACAGGTGTTGAGGGGAGGGACTGACCCTGCTGCACACCTG--CTCTAAGGAAG i otoGar3.GL873658 I 831 C 0 s dasNov3.JH576208 1763606 253 + 4416731 GCCTGACAGGGTGCTTTGCCCAGTTTTTCACTCTC----AATAATAACACA-------------ACAGTAATT------AAGAGCCCGTCTTTCGGAAGTTTTCAGTTCCCTAGGagcttgtggctttgga-aagttatccaacct-ctctaaattttagagt--------tggtaactctaaaacagaaaatattcattcctttttcatagtgttgaagtgaaggttacaggttaacaGCCC--------AGGGCAGGGCTTGATCCTGTGGTACATCCTGGCATTAAGGAAG i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e colAng1.NW_012118821v1 1422406 2125 - 13651311 M a score=41563.000000 s hg38.chr2_KI270774v1_alt 158353 9 + 223625 AGCTGACAG s panTro5.chr2A 1445223 9 + 111504155 AGCTGACAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1394272 9 + 114371477 AGCTGACAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1418474 9 + 1464242 AGCTGACAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1141329 9 + 81552678 AGCTGCCAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1470582 9 + 108979918 AGTTGCCAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1443029 9 - 111193037 AGTTGCCAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1471008 9 + 3644372 AGTTGCCAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1425517 9 - 10304083 AGTTGCCAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1503013 9 - 107702431 AGTTGCCAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 990974 9 - 2200435 AGTTGCCAG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1424272 6 - 108792865 -CCTGCC-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1253328 6 - 7082604 -CCTGCC-- i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 946073 9 + 5252280 AGCTGCCCA i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1763859 9 + 4416731 AGCTGCTGG i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 165519 59 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1347053 6 + 1864846 I e colAng1.NW_012118821v1 1422406 2125 - 13651311 M a score=240076.000000 s hg38.chr2_KI270774v1_alt 158362 35 + 223625 --GGAAAGGGCACATGCTCTCTGC-AGCCCACAG--AGCT---------------------- s panTro5.chr2A 1445232 35 + 111504155 --GGAAAGGGCACATGCTCTCTGC-AGCCCACAG--AGCT---------------------- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1394281 35 + 114371477 --GGAAAGGGCACATGCTCTCTGC-AGCCCACAG--AGCT---------------------- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1418483 35 + 1464242 --GGAAAGGGCACATGCTCTCTGC-AGCCCACAG--AGCT---------------------- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1141338 35 + 81552678 --GGAAAGGGCACATGCTCTCTGC-AGCCCACAG--AGCT---------------------- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1470591 35 + 108979918 --GGAAAGGGCACGTGCTCTCTGC-AACCCACAG--AGCT---------------------- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1443038 35 - 111193037 --GGAAAGGGCACGTGCTCTCTGC-AACCCACAG--AGCT---------------------- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1471017 35 + 3644372 --GGAAAGGGCACGTGCTCTCTGC-AACCCACAG--AGCT---------------------- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1425526 35 - 10304083 --GGAAAGGGTACCTGCTCTCTGC-AACCCGCAG--AGCT---------------------- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1503022 35 - 107702431 --GGAAAGGGCACGTGCTCTCTGC-AACCCACAG--AGCT---------------------- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 990983 35 - 2200435 --GGAAAGGGCACCTGCTCTCTGC-AACCCACAG--AGCT---------------------- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1424278 35 - 108792865 --GGGAAGGCCACCTGCTCTCGGT-GGTCCACAG--AGCT---------------------- i calJac3.chr14 C 0 I 19 s saiBol1.JH378218 1253334 34 - 7082604 --GGGAAGGCCACCTGCTCTCGG--GGTCCACGG--AGCT---------------------- i saiBol1.JH378218 C 0 I 19 s cebCap1.NW_016107827v1 1347059 35 + 1864846 --GGGAAGGCCACCTGCTCTCGGC-GGTCCACGG--AGCT---------------------- i cebCap1.NW_016107827v1 I 6 I 19 s otoGar3.GL873658 946082 32 + 5252280 --------GACAGGCGTTCACAGCTCATTCACATCCAGCC---------------------- i otoGar3.GL873658 C 0 I 2 s dasNov3.JH576208 1763868 59 + 4416731 TGTGACACAGCATGTgctttctac-agctcacag--agcacttccacacccagcatcttact i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 165519 59 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e colAng1.NW_012118821v1 1422406 2125 - 13651311 M a score=1624896.000000 s hg38.chr2_KI270774v1_alt 158397 209 + 223625 CGACtc-ttccca--------------------------ggaaacctgtaaatctgg--aaaaa---atattttagatctccatgtt-acagatgagaagatggaagctggccacagccagagttggaatccca-----cccaaggtcTCCTCACTCCCCTCAAGCTGCCTTTACACTAAACAGTGATGCCCACAAAACTCGGAGACTGT-TTACTCATTGTGCTCCTAAACCAAGTCCAT----GGCACTG s panTro5.chr2A 1445267 235 + 111504155 CGACTC-TTCCCATGGAAGAGTCTTGGCGACtcttcccaggaaacctgtaaatctgg--aaaaa---atgttttagatctccatgtt-acagatgagaagatggaagctggccacagccagagttggaatccca-----cccaaggtctccTCACTCCCCTCAAGCTGCCTTTACACTAAACAGTGATGCCCACAAAACTCGCAGACTGT-TTACTCATTGTGGTCCTAAACCAAGTCCAT----GGCACTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1394316 235 + 114371477 CGACTC-TTCCCATGGAAGAGTCTTGGCGACtcttcccaggaaacctgtaaatctgg--aaaaa---atgttttagatctccatgtt-acagatgagaagatggaagctggccacagccagagttggaatccca-----cccaaggtctccTCACTCCCCTCAAGCTGCCTTTACACTAAACAGTGATGCCCACAAAACTCGCAGACTGT-TTACTCATTGTGGTCCTAAACCAAGTCCAT----GGCACTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1418518 209 + 1464242 CGACtc-ttccca--------------------------ggaaacctgtaaatctgg--aaaaa---atgttttagatctccatgtt-acagatgagaagatggaagctggccacagccagaggtggaatccca-----cccaaggtctccTCACTCCCCTCAAGCTGCCTTTACACTAAACAGTGATGCCCACAAAACTCGCAGACTGT-TTACTCATTGTGCTCCTAAACCAAGTCCAT----GGCACTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1141373 228 + 81552678 CGCCGG-CATCCG-------GCATGGGTGACtcttcccaggaaacctgtaaatctgg--aaata---atgttttagatctccatgtt-acagatgagaagatggaagctGGCCACAGCCAGAGCTGGAAGGCCA-----CCCAGGGTCTCCTCACTCCCCTCGAGCTGCCTTTACACTAAACAGTGATGCCCCCAAAACTCGGAGACCGT-TTACTCATTGTGCTCCTAAACCAAGTCCAT----GGCACTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1470626 228 + 108979918 TGCCCGACATCCA-------GCACAGGCGACTCTTCCCAAGAAACCTGTAAATCTGG--AAA-A---ATGTTTTAGATCTCCATGTT-GTAGAAGAGAAGATGGAAGCTGGCCACAGCCAGAGTTGGAAGCCCA-----CCCAAGGTCTCCTTACTCCCCTCTATCTGCCTTTACACTAAACAGTGATGCCCACAAAACTCTGAGACTGT-TTGCTCATTGGGCTCCTAAACCAAGTCCAT----GGCACTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1443073 228 - 111193037 TGCCCGACATCCA-------GCACAGGCGACTCTTCCCAAGAAACCTGTAAATCTGG--AAA-A---ATGTTTTAGATCTCCATGTT-GTAGAAGAGAAGATGGAAGCTGGCCACAGCCAGAGTTGGAAGCCCA-----CCCAAGGTCTCCTTACTCCCCTCTATCTGCCTTTACACTAAACAGTGATGCCCACAAAACTCTGAGACTGT-TTGCTCATTGGGCTCCTAAACCAAGTCCAT----GGCACTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1471052 228 + 3644372 TGCCCGACATCCA-------GCACAGGCGACTCTTCCCAAGAAACCTGTAAATCTGG--AAA-A---ATGTTTTAGATCTCTATGTT-GTAGAAGAGAAGATGGAAGCTGGCCACAGCCAGAGTTGGAAGCCCA-----CCCAAGGTCTCCTTACTCCCCTCTATCTGCCTTTACACTAAACAGTGATGCCCACAAAACTCTGAGACTGT-TTGCTCATTGGGCTCCTAAACCAAGTCCAT----GGCACTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1425561 228 - 10304083 TGCCCGACATCCA-------GCACAGGCGACTCTTCCCAAGAAACCTGTAAATCTGG--AAA-A---ATGTTTTGGATCTCCATGTT-ACAGAAGAGAAGATGGAAGCTGGCCACAGCCAGAGTTGGAAGCCCA-----CCCAAGGTCTCCTTACTCCCCTCTAGCTGCCTTTACACTGAACAGTGATGCCCACAAAACTCTGAGACTGT-TTGCTCATGGGGCTCCTAAACCAAGTCCAT----GGCACTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1503057 228 - 107702431 TGCCCGACATCCA-------GCATGGGTGACTCTTCCCAAGAAACCTGTAAATCTGG--AAA-A---ATGATTTAGATCTCCATGTT-ACAGAAGAGAAGATGGAAGCTGGCCACAGCCAGAGTTGGAAGCCCA-----CGCAAGGTCTCCTTACTCCCCTCTAGCTGCCTTTACACTAAACAGTGATTTCCACAAAATTCTGAGACTGT-TTGTTCATTGGGCTCCTAAACCAAGTCCAT----GGTACTG i chlSab2.chr14 C 0 I 215 s manLeu1.NW_012103754v1 991018 228 - 2200435 TGCCCGACATCCA-------GCACAGGCGACTCTTCCCAAGAAACCTGTAAATCTGG--AAA-A---ATGTTTTAGATCTCCATGTT-ACAGAAGAGAAGATGGAAGCTGGCCACAGCCAGAGTTGGAAGCCCA-----CCCAAGGTCTCCTTACTCCCCTCTAGCTGCCTTTACACTTAACAGTGATGCCCACAAAACTCTGAGACTGT-TTGCTCATTGGGCTCCTAAACCAAGTGCAT----GGCACTG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1424332 212 - 108792865 ---------------------------CGACtcttcccaggaaacctgtaaacctgg--aaa-a---gtgttttagatcctcatgtt-acagatgaggagttggaagctGGTGACAGCCAG-GCTGGAAGCCCCCCCCACCCCGGGTCTCCTCACTCCCCTCTGGCTGTCTTCACACTAAACAGTGACGCCCACAAAACCCTGAAGCTGT-GGGCTCACCGTGCCCCTAAACCAAGCCCAG----GGCGCTG i calJac3.chr14 I 19 C 0 s saiBol1.JH378218 1253387 206 - 7082604 ---------------------------CGGCtcttcccaggaaacctgtaaacctgg--ata-a---gtgttttagatcctcctgtt-acagatgaggagatggaagctGGTGACAGCCAG-GCTGGAAGCC-------CCCCGGGTCTCCTCACTCCCCTCTAGCTGTCTTCACACTAGACAGTGACACCCACAAAACCCTGAAGCTATGGGGCCCCGCGTGCTCCTAAACCAAGCCCAG----GGCACTG i saiBol1.JH378218 I 19 C 0 s cebCap1.NW_016107827v1 1347113 206 + 1864846 ---------------------------CGGCtcttcccaggaaacctgtaagcctgg--aaa-a---gtgtttcagatcctcatgtt-acagatgaggagatggaagctGGTGACAGCCAG-GCTGGAAGCCC------CTCCAGGTCTCCTCACTCCCCTCTAGCTGTCTTCACACTAAACAGTGACGCCCACAAAACCCTGAAGCTGT-GGGCCCCCAGTGCTCCTAAACCGAGCCTAG----GGCACTG i cebCap1.NW_016107827v1 I 19 C 0 s aotNan1.NW_018513311v1 165578 206 + 287728 ---------------------------CGACtcttcccaggaaacctgtaaacctgg--caa-a---gtgttttagatcctcatgtt-acagatgaggggatggaagcCGGTGACAGCCAG-GCTGGAAGCCC------CCCCGGGTCTCCTCACTCCCCTCTCGCTGTCTTCACGCTAAACAGTGACGCCCACAAAACCCTGAAGCTGT-GGGCGCACCGTGCTCCTAAACCAAGCCCAG----GGCACTG i aotNan1.NW_018513311v1 I 59 C 0 s otoGar3.GL873658 946116 175 + 5252280 ---------------------------AGCCTCCCCGCTAGAAACCTGCCAATGTGGCCAAA-C---ATGCCTTAGCTCTGCTTG------GATGAGGAGAGCTATGCTGGCCAGGGCCACAGCTTGGCCCAGA-----CCAGAGGGTAC------------------------CACTAAACA-CGGTGCCCTGGGATCTCAGCAGCT---CTGCCCATGGTACTTCTAAAGGAAGGCCAC----TTCA--- i otoGar3.GL873658 I 2 C 0 s dasNov3.JH576208 1763927 209 + 4416731 ---------------------------tgattttccataagaaatctgtgaatttgg--caa-acatattttttagatgtcctcgttaacagatgaagaaactgagactggttgcaggcagacctagtaccagag----cccaggccctcctgatttc-----agggctctttccaccaaactgcgatgcACATAAATCTATTTAACTAT-TTGTTCATTTCACTCTTAAAGGAAGGGCATATTGGGCG--- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e colAng1.NW_012118821v1 1422406 2125 - 13651311 M a score=112865.000000 s hg38.chr2_KI270774v1_alt 158606 12 + 223625 GAAAGGAAGAAG s panTro5.chr2A 1445502 12 + 111504155 GAAAGAAAGAGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1394551 12 + 114371477 GAAAGAAAGAGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1418727 12 + 1464242 GAAAGAAAGAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1141601 12 + 81552678 GAAAGAAAGAGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1470854 12 + 108979918 GAAAGAAAGAGG i rheMac8.chr13 C 0 I 205 s macFas5.chr13 1443301 12 - 111193037 GAAAGAAAGAGG i macFas5.chr13 C 0 I 205 s macNem1.NW_012011978v1 1471280 12 + 3644372 GAAAGAAAGAGG i macNem1.NW_012011978v1 C 0 I 205 s cerAty1.NW_012000820v1 1425789 12 - 10304083 GAAAGAAAGAGG i cerAty1.NW_012000820v1 C 0 I 213 s chlSab2.chr14 1503500 12 - 107702431 gaaagaaagaGA i chlSab2.chr14 I 215 C 0 s manLeu1.NW_012103754v1 991246 12 - 2200435 GAAAGAAAGAGG i manLeu1.NW_012103754v1 C 0 I 204 s calJac3.chr14 1424544 12 - 108792865 GAAAGAAACAGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1253593 12 - 7082604 GAAAGCAACAGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1347319 12 + 1864846 GAAAGCAACAGG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 165784 12 + 287728 GAAAGAAACGGG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 946291 9 + 5252280 ---AAGAAGAGG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1764136 12 + 4416731 GAGAGAAAACGG i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e colAng1.NW_012118821v1 1422406 2125 - 13651311 M a score=817704.000000 s hg38.chr2_KI270774v1_alt 158618 118 + 223625 TCAGCTCTTCCGAAAGTCAGAAAATAAAC-CAGACCGGGGATTCCATGAGCAGCTAGAGCAG-GTCTGAGCAGGAGCGAGACTGGCTCAGGCCAAGAGCGTCTGAGCTTTGGGGAGATGT s panTro5.chr2A 1445514 118 + 111504155 TCAGCTCTTCCGAAAGTCAGAAAATAAAC-CAGACCGGGGATTCCATGAGCAGCTAGAGCAG-GTCTGAGCAGGAGCGAGACTGGCTTAGGCCAAGAGCGTCTGAGCTTTGGGGAGATGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1394563 118 + 114371477 TCAGCTCTTCCGAAAGTCAGAAAATAAAC-CAGACCGGGGATTCCATGAGCAGCTAGAGCAG-GTCTGAGCAGGAGCGAGACTGGCTTAGGCCAAGAGCGTCTGAGCTTTGGGGAGATGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1418739 118 + 1464242 TCAGCTCTTCCGAAAGTCAGAAAATAAAC-CAGACCGGGGATTCCATGAGCAGCTAGAGCAG-GTCTGAGCAGGAGCGAGACTGGCTCAGGCCAAGAGCGTCTGAGCTTTGGGGAGATGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1141613 118 + 81552678 TCAGCTCTTCCGAAAGTCAGAAAATAAAC-CAGACCGAGGATTCCATGAGCAGCTAGAACAA-GTCTGAGCAGGAGCGAGACTGGCTCAGGCCAGGAGCATCAGAGCTTTGGGGAGATGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1471071 118 + 108979918 TCAGCTCTTCCCAAAGTCAGAAGGTAAAT-CAGACCGGGGAGTTCATGAGCAGCTAGAGCAG-GTCTGAGCAGGAACGAGACTGGCTCAGGCCAAGAGCATCTGAGCTTTAGGGAGATGT i rheMac8.chr13 I 205 C 0 s macFas5.chr13 1443518 118 - 111193037 TCAGCTCTTCCCAAAGTCAGAAGGTAAAT-CAGACCGGGGAGTTCATGAGCAGCTAGAGCAG-GTCTGAGCAGGAACGAGACTGGCTCAGGCCAAGAGCATCTGAGCTTTAGGGAGATGT i macFas5.chr13 I 205 C 0 s macNem1.NW_012011978v1 1471497 118 + 3644372 TCAGCTCTTCCCAAAGTCAGAAGGTAAAT-CAGACCGGGGAGTTCATGAGCAGCTAGAGCAG-GTCTGAGCAGGAACGAGACTGGCTCAGGCCAAGAGCATCTGAGCTTTAGGGAGATGT i macNem1.NW_012011978v1 I 205 C 0 s cerAty1.NW_012000820v1 1426014 120 - 10304083 TCAGCTCTTCCCAAAGTCAGAAGGTAAATCCAGACCGGGGCGTTCATGAGCAGCTAGAGCAGTGTCTGAGCAGGAACGAGACTGGCTCAGGCCAAGAGCATCTGAGCTTTAGGGAGATGT i cerAty1.NW_012000820v1 I 213 C 0 s chlSab2.chr14 1503512 118 - 107702431 TCAGCTCTTCCGAAAGTCAGAAGGTAAAT-CAGACCTGGGATTTCATGAGCAGCTAGAGCAG-GTCTGAGCAGGAACGAGACTGGCTCAGGCCAAGAGCATCTGAGCTTTAGGGAGATGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 991462 118 - 2200435 TCAGCTCTTCCCAAAGTCAGAAGGTAAAT-CAGACCGGGGAGTTCATGAGCAGCTAGAGCAG-GTCTGAGCAGGAACGAGACTGGCTCAGGCCAAGAGCATCTGAGCTTTAGGGAGATGT i manLeu1.NW_012103754v1 I 204 C 0 s calJac3.chr14 1424556 93 - 108792865 TCAGCACTTCCGAAAGTCAGAGAA-AAAC-CAGACCCGGGATTCCAGGGGCAGCCAGGACCC-GTCTCAGCAGGAGCCAG----GCTTCGGGGAGGTGCG-------------------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1253605 96 - 7082604 TCAGCGCTTCCGAAAGTCAGAGAA-AAAC-CAGA-CCGGGATTCCACGGGCCGCCCGGACAG-GTCTCAGCAGGAGCCAGACTTGCTCCGGCCAAGAGCG-------------------- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1347331 117 + 1864846 TCAGCGCTTCCGAAAGTCAGAGAA-AAAC-CAGACCCGGGATTCCATGGGCAGCCGGGACAG-GTCTCCGCAGGAGCCAGACTTGCCCGGGCCAAGAGCATCTGAGCTTCGGGGAGGTGT i cebCap1.NW_016107827v1 C 0 I 183 s aotNan1.NW_018513311v1 165796 113 + 287728 TCAGCGCTTCCGAA----AGAGAA-AAAC-CAGACCCGGGATTCCACGGGCAGCCAGGACAG-GTCTCAGCAGGAGCCAGACTTGCTCGGGCCAGGAGCATCTGAGCTTCGGGGAGGTGC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 946300 66 + 5252280 TCAGCTCCTC--------------------CAG--------------GAGCAACTAGGTCAG-GTCTGAGGAAGGAAGGGGCGTGACCAGGGTGA-------TGATCT------------ i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1764148 110 + 4416731 TAAGCTTGCCCAGGAGTCAAAAGATAAGC-CCAAGGTGTGGCAATGCTGGCAGACAGGCCAC-GTTCAGGGAAGTAAGGCATTGAGT-AGTCCTAGAA------AACTCTAAGAAGGTT- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e colAng1.NW_012118821v1 1422406 2125 - 13651311 M a score=197936.000000 s hg38.chr2_KI270774v1_alt 158736 34 + 223625 GGACTCCTAGGATG------------TGG-GGTCCAT----CCTCTGGGTT s panTro5.chr2A 1445632 34 + 111504155 GGACTCTTAGGATG------------TGG-GGTCCAT----CCTCTGGGTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1394681 34 + 114371477 GGACTCTTAGGATG------------TGG-GGTCCAT----CCTCTGGGTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1418857 34 + 1464242 GGACTCCTAGGATG------------TGG-GGTCCAT----CCTCTGGGTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1141731 34 + 81552678 GGACTCCTAGGATG------------TGG-GGTCCAT----CCTCTGGGTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1471189 34 + 108979918 GGACTCCTAGGATG------------TGG-GGTGCAT----CCTCTGGGTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1443636 34 - 111193037 GGACTCCTAGGATG------------TGG-GGTGCAT----CCTCTGGGTT i macFas5.chr13 C 0 I 11 s macNem1.NW_012011978v1 1471615 34 + 3644372 GGACTCCTAGGATG------------TGG-GGTGCAT----CCTCTGGGTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1426134 34 - 10304083 GGACTCCTAGGATG------------TGG-GGTGCAT----CCTCTGGGTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1503630 34 - 107702431 GGACTCCTAGGATG------------TGG-GGTGCAT----CCTCTGGGTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 991580 34 - 2200435 GGACTCCTAGGACG------------TGG-GGTGCAT----CCTCTGGGTT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1424649 33 - 108792865 -GGCTCCTAGGATG------------GCG-GCTCCAC----CCTCTGGGTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1253701 31 - 7082604 ----TCTGAGCTTG------------GGGAGGTGCGG----ACTCTGGGTT i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 165909 33 + 287728 GGACTCCT-GGATG------------GCG-GCTCCAC----CCTCTGGGTT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 946366 15 + 5252280 GAGCTGCCAGG-------------------GGTG----------------- i otoGar3.GL873658 C 0 I 1 s dasNov3.JH576208 1764258 50 + 4416731 GGATTTTGGAGATGCCATCCATAGGTTGG-GACTTTTTATCCCGCTGGGTT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1347448 183 + 1864846 I e colAng1.NW_012118821v1 1422406 2125 - 13651311 M a score=9979.000000 s hg38.chr2_KI270774v1_alt 158770 2 + 223625 CA s panTro5.chr2A 1445666 2 + 111504155 CA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1394715 2 + 114371477 CA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1418891 2 + 1464242 CA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1141765 2 + 81552678 CA i nomLeu3.chr19 C 0 I 2 s rheMac8.chr13 1471223 2 + 108979918 CA i rheMac8.chr13 C 0 C 0 s macNem1.NW_012011978v1 1471649 2 + 3644372 CA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1426168 2 - 10304083 CA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1503664 2 - 107702431 CA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 991614 2 - 2200435 CA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1424682 2 - 108792865 CA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1253732 2 - 7082604 CA i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 165942 2 + 287728 CA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 946382 1 + 5252280 C- i otoGar3.GL873658 I 1 I 1 s dasNov3.JH576208 1764308 2 + 4416731 CT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1347448 183 + 1864846 I e colAng1.NW_012118821v1 1422406 2125 - 13651311 M e macFas5.chr13 1443670 11 - 111193037 I a score=6016.000000 s hg38.chr2_KI270774v1_alt 158772 2 + 223625 AC s panTro5.chr2A 1445668 2 + 111504155 AC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1394717 2 + 114371477 AC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1418893 2 + 1464242 AC i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1471225 2 + 108979918 GC i rheMac8.chr13 C 0 C 0 s macNem1.NW_012011978v1 1471651 2 + 3644372 GC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1426170 2 - 10304083 GC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1503666 2 - 107702431 GC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 991616 2 - 2200435 GC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1424684 2 - 108792865 GC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1253734 2 - 7082604 GC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 165944 2 + 287728 GC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 946384 1 + 5252280 G- i otoGar3.GL873658 I 1 C 0 s dasNov3.JH576208 1764310 2 + 4416731 GC i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1347448 183 + 1864846 I e colAng1.NW_012118821v1 1422406 2125 - 13651311 M e macFas5.chr13 1443670 11 - 111193037 I e nomLeu3.chr19 1141767 2 + 81552678 I a score=33760.000000 s hg38.chr2_KI270774v1_alt 158774 5 + 223625 CTCTT-- s panTro5.chr2A 1445670 5 + 111504155 CTCTT-- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1394719 5 + 114371477 CTCTT-- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1418895 5 + 1464242 CTCTT-- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1141769 5 + 81552678 CTCTT-- i nomLeu3.chr19 I 2 C 0 s rheMac8.chr13 1471227 5 + 108979918 CTCTT-- i rheMac8.chr13 C 0 I 2 s macNem1.NW_012011978v1 1471653 5 + 3644372 CTCTT-- i macNem1.NW_012011978v1 C 0 I 2 s cerAty1.NW_012000820v1 1426172 5 - 10304083 CTCTT-- i cerAty1.NW_012000820v1 C 0 I 2 s chlSab2.chr14 1503668 5 - 107702431 CTCTT-- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 991618 5 - 2200435 CTCTT-- i manLeu1.NW_012103754v1 C 0 I 2 s calJac3.chr14 1424686 5 - 108792865 CTCCT-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1253736 5 - 7082604 CTCCT-- i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 165946 5 + 287728 CCCCT-- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 946385 5 + 5252280 CTCTT-- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1764312 5 + 4416731 --CTTCC i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1347448 183 + 1864846 I e colAng1.NW_012118821v1 1422406 2125 - 13651311 M e macFas5.chr13 1443670 11 - 111193037 I a score=45901.000000 s hg38.chr2_KI270774v1_alt 158779 13 + 223625 CCAGGCAAGAGA-C s panTro5.chr2A 1445675 13 + 111504155 CCAGGCAAGGGA-C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1394724 13 + 114371477 CCAGGCAAGGGA-C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1418900 13 + 1464242 CCAGGCAAGAGA-C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1141774 13 + 81552678 CCAGGCAAGAGA-C i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1443681 13 - 111193037 CCAGGCAAGAGA-C i macFas5.chr13 I 11 C 0 s cerAty1.NW_012000820v1 1426179 13 - 10304083 CCAGGCAAGAGA-C i cerAty1.NW_012000820v1 I 2 C 0 s chlSab2.chr14 1503673 13 - 107702431 CCAGGCAAGAGA-C i chlSab2.chr14 C 0 C 0 s calJac3.chr14 1424691 12 - 108792865 CCAAGCAGGAGA-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1253741 12 - 7082604 CCAAGCAGGAGA-- i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 165951 13 + 287728 CCAAGCAGGAGAC- i aotNan1.NW_018513311v1 C 0 I 106 s dasNov3.JH576208 1764317 13 + 4416731 TCCGGCAATGAA-C i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1347448 183 + 1864846 I e otoGar3.GL873658 946390 0 + 5252280 C e colAng1.NW_012118821v1 1422406 2125 - 13651311 M e manLeu1.NW_012103754v1 991623 2 - 2200435 I e macNem1.NW_012011978v1 1471658 2 + 3644372 I e rheMac8.chr13 1471232 2 + 108979918 I a score=14399.000000 s hg38.chr2_KI270774v1_alt 158792 6 + 223625 CACCAG s panTro5.chr2A 1445688 6 + 111504155 CACCAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1394737 6 + 114371477 CACCAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1418913 6 + 1464242 CACCAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1141787 6 + 81552678 TACCGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1443694 6 - 111193037 CACTGG i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1426192 6 - 10304083 CACCGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1503686 6 - 107702431 CACCGG i chlSab2.chr14 C 0 C 0 s calJac3.chr14 1424703 6 - 108792865 CACCTG i calJac3.chr14 C 0 C 0 s dasNov3.JH576208 1764330 4 + 4416731 CACC-- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 165964 106 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1253753 0 - 7082604 C e cebCap1.NW_016107827v1 1347448 183 + 1864846 I e otoGar3.GL873658 946390 0 + 5252280 C e colAng1.NW_012118821v1 1422406 2125 - 13651311 M e manLeu1.NW_012103754v1 991623 2 - 2200435 I e macNem1.NW_012011978v1 1471658 2 + 3644372 I e rheMac8.chr13 1471232 2 + 108979918 I a score=54451.000000 s hg38.chr2_KI270774v1_alt 158798 45 + 223625 TGAGCAGG-CT-GAGGGGAGGTG-CGGG---GCTGGCTGGACCGACCCCTG s panTro5.chr2A 1445694 38 + 111504155 TGAGCAGG-CT-GAGGGGAGGTG-CGGG---GCTGGCTGGACCG------- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1394743 45 + 114371477 TGAGCAGG-CT-GAGGGGAGGTG-CGGG---GCTGGCTGGACCGACCCCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1418919 45 + 1464242 TGAGCAGG-CT-GAGGGGAGGTG-CGGG---GCTGGCTGGACCGACCCCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1141793 49 + 81552678 TGAGCAGG-CCAGGGGGGAGGTG-GGGGGGCGCTGGCTGGACCGACCCCTG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1443700 47 - 111193037 TGAGCAGGCCA-GGGGGGAGGTCGGGGG---ACTGGCTGGACCGACCCCTG i macFas5.chr13 C 0 T 77 s cerAty1.NW_012000820v1 1426198 45 - 10304083 TGAGCAGG-CA-GGGGGGAGGTC-GGGG---ACTGGCTGGACCGACCCCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1503692 46 - 107702431 TGAGCGGG-CC-AGCGGGAGGTCGGGGG---ACTGGCTGGACCGACGCCTG i chlSab2.chr14 C 0 C 0 s saiBol1.JH378218 1253753 40 - 7082604 ----CACG-TC-GCGGGGAGG-G-AGGA---GCTGGCGGGACCGACCCCCG i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 946390 20 + 5252280 ------------------------AGCA---GGTGGCTCCACCCTCC---- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1764334 10 + 4416731 ----CAGC-TC-AAAG----------------------------------- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 165964 106 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1347448 183 + 1864846 I e calJac3.chr14 1424709 0 - 108792865 C e colAng1.NW_012118821v1 1422406 2125 - 13651311 M e manLeu1.NW_012103754v1 991623 2 - 2200435 I e macNem1.NW_012011978v1 1471658 2 + 3644372 I e rheMac8.chr13 1471232 2 + 108979918 I a score=5828.000000 s hg38.chr2_KI270774v1_alt 158843 2 + 223625 CA s panPan2.chr2A 1394788 2 + 114371477 CA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1418964 2 + 1464242 TA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1141842 2 + 81552678 CA i nomLeu3.chr19 C 0 T 77 s macFas5.chr13 1443670 2 - 111193037 CA i macFas5.chr13 T 77 C 0 s cerAty1.NW_012000820v1 1426243 2 - 10304083 CA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1503738 2 - 107702431 CA i chlSab2.chr14 C 0 C 0 s saiBol1.JH378218 1253793 2 - 7082604 CA i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 946410 2 + 5252280 CA i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 165964 106 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1347448 183 + 1864846 I e dasNov3.JH576208 1764344 0 + 4416731 C e calJac3.chr14 1424709 0 - 108792865 C e colAng1.NW_012118821v1 1422406 2125 - 13651311 M e manLeu1.NW_012103754v1 991623 2 - 2200435 I e macNem1.NW_012011978v1 1471658 2 + 3644372 I e rheMac8.chr13 1471232 2 + 108979918 I e panTro5.chr2A 1445732 0 + 111504155 C a score=3600.000000 s hg38.chr2_KI270774v1_alt 158845 1 + 223625 G s panPan2.chr2A 1394790 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1418966 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1141767 1 + 81552678 G i nomLeu3.chr19 T 77 C 0 s macFas5.chr13 1443672 1 - 111193037 G i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1426245 1 - 10304083 G i cerAty1.NW_012000820v1 C 0 I 6 s chlSab2.chr14 1503740 1 - 107702431 G i chlSab2.chr14 C 0 I 4 s saiBol1.JH378218 1253795 1 - 7082604 G i saiBol1.JH378218 C 0 I 467 s otoGar3.GL873658 946412 1 + 5252280 G i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 165964 106 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e cebCap1.NW_016107827v1 1347448 183 + 1864846 I e dasNov3.JH576208 1764344 0 + 4416731 C e calJac3.chr14 1424709 0 - 108792865 C e colAng1.NW_012118821v1 1422406 2125 - 13651311 M e manLeu1.NW_012103754v1 991623 2 - 2200435 I e macNem1.NW_012011978v1 1471658 2 + 3644372 I e rheMac8.chr13 1471232 2 + 108979918 I e panTro5.chr2A 1445732 0 + 111504155 C a score=16753.000000 s hg38.chr2_KI270774v1_alt 158846 71 + 223625 CCTCTT--CCAGGCAAGAGACCACCGGTGAGCAGGCCAGGGGGGAGGT-GGGGG---GCTGGCTGGACCAACCCCTG s panTro5.chr2A 1445732 7 + 111504155 ----------------------------------------------------------------------ACCCCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1394791 70 + 114371477 CCTCTT--CCAGGCAAGAGACCACCGGTGAGCAGGCC-GGGGGGAGGT-GGGTG---GCTGGCTGGACCGACCCCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1418967 71 + 1464242 CCTCTT--CCAGGCAAGAGACCACCGGTGAGCAGGCCACGGGGGAGGT-GGGGG---GCTGGCTGGACCAACCCCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1141768 74 + 81552678 CCTCTT--CCAGGCAAGAGACTACCGGTGAGCAGGCCAGGGGGGAGGT-GGGGGGGCGCTGGCTGGACCGACCCCTG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1443673 74 - 111193037 CCTCTTCCCCAGGCAAGAGACCACTGGTGAGCAGGCCAGGGGGGAGGTCGGGGG---ACTGGCTGGACCGACCCCTG i macFas5.chr13 C 0 T 77 s otoGar3.GL873658 946413 4 + 5252280 -CTTT------------------------------------------------------------------------ i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1764344 30 + 4416731 -------TCAAGGCAGGGG-------------AGGCTGGGAGTGGGGT-GG-------------------------- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 165964 106 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1253796 467 - 7082604 I e cebCap1.NW_016107827v1 1347448 183 + 1864846 I e calJac3.chr14 1424709 0 - 108792865 C e colAng1.NW_012118821v1 1422406 2125 - 13651311 M e manLeu1.NW_012103754v1 991623 2 - 2200435 I e chlSab2.chr14 1503741 4 - 107702431 I e cerAty1.NW_012000820v1 1426246 6 - 10304083 I e macNem1.NW_012011978v1 1471658 2 + 3644372 I e rheMac8.chr13 1471232 2 + 108979918 I a score=15452.000000 s hg38.chr2_KI270774v1_alt 158917 9 + 223625 CAGCCTCTT s panTro5.chr2A 1445739 9 + 111504155 CAGCCTCTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1394861 9 + 114371477 CAGCCTCTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1419038 9 + 1464242 CAGCCTCTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1141842 9 + 81552678 CAGCCTCTT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1443670 9 - 111193037 CAGCCTCTT i macFas5.chr13 T 77 I 2 s otoGar3.GL873658 946417 7 + 5252280 --GCCTCTC i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1764374 5 + 4416731 CAGCC---- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 165964 106 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1253796 467 - 7082604 I e cebCap1.NW_016107827v1 1347448 183 + 1864846 I e calJac3.chr14 1424709 0 - 108792865 C e colAng1.NW_012118821v1 1422406 2125 - 13651311 M e manLeu1.NW_012103754v1 991623 2 - 2200435 I e chlSab2.chr14 1503741 4 - 107702431 I e cerAty1.NW_012000820v1 1426246 6 - 10304083 I e macNem1.NW_012011978v1 1471658 2 + 3644372 I e rheMac8.chr13 1471232 2 + 108979918 I a score=108068.000000 s hg38.chr2_KI270774v1_alt 158926 28 + 223625 CCAGGCAAGAGACCACCGGTAAGCAGGC s panTro5.chr2A 1445748 28 + 111504155 CCAGGCAAGAGACCACCGGTAAGCAGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1394870 28 + 114371477 CCAGGCAAGAGACCACCGGTAAGCAGGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1419047 28 + 1464242 CCAGGCAAGAGACCACCGGTAAGCAGGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1141851 28 + 81552678 CCAGGCAAGAGACCACCGGTGAGCAGGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1471234 28 + 108979918 CCAGGCAAGAGACCACTGGTGAGCAGGC i rheMac8.chr13 I 2 C 0 s macFas5.chr13 1443681 28 - 111193037 CCAGGCAAGAGACCACTGGTGAGCAGGC i macFas5.chr13 I 2 C 0 s macNem1.NW_012011978v1 1471660 28 + 3644372 CCAGGCAAGAGACCACTGGTGAGCAGGC i macNem1.NW_012011978v1 I 2 C 0 s manLeu1.NW_012103754v1 991625 28 - 2200435 CCAGGCAAGAGACCACCGGTGAGCAGGC i manLeu1.NW_012103754v1 I 2 C 0 s otoGar3.GL873658 946424 28 + 5252280 CCAGGCAAGAGACCAGGGATAAGAAGGC i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1764379 7 + 4416731 ---------------------AGAAGGC i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 165964 106 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1253796 467 - 7082604 I e cebCap1.NW_016107827v1 1347448 183 + 1864846 I e calJac3.chr14 1424709 0 - 108792865 C e colAng1.NW_012118821v1 1422406 2125 - 13651311 M e chlSab2.chr14 1503741 4 - 107702431 I e cerAty1.NW_012000820v1 1426246 6 - 10304083 I a score=132706.000000 s hg38.chr2_KI270774v1_alt 158954 44 + 223625 CGGGGGGGGAGGTGAGGGGACTGGCTGGACTGACCCCTAC----AGAG-- s panTro5.chr2A 1445776 44 + 111504155 CAGCGGGGGCGGTGAGGGGACTGGCTGGACTGACCCCTGC----AGAG-- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1394898 44 + 114371477 CAGGGGGGGCGGTGAGGGGACTGGCTGGACTGACCCCTGC----AGAG-- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1419075 43 + 1464242 C-GGGGGGGAGGTGAGGGGACTGGCTGGACTGACCCCTGC----AGAG-- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1141879 47 + 81552678 C-AGGGGGAAGGTGAGGGGACTGGCTGGACCGACCCCTGCAGAGAGAG-- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1471262 43 + 108979918 C-AGGGGGGAGGTCGGGGGACTGGCTGGACCGACCCCTGC----AGAG-- i rheMac8.chr13 C 0 I 2 s macFas5.chr13 1443709 43 - 111193037 C-AGGGGGGAGGTCGGGGGACTGGCTGGACCGACCCCTGC----AGAG-- i macFas5.chr13 C 0 I 2 s macNem1.NW_012011978v1 1471688 43 + 3644372 C-AGGGGGGAGGTCGGGGGACTGGCTGGACCGACCCCTGC----AGAG-- i macNem1.NW_012011978v1 C 0 I 2 s manLeu1.NW_012103754v1 991653 43 - 2200435 C-AGGGGGGAGGTTGGGGGACTGGCTGGACCGACCCCTGC----AGAG-- i manLeu1.NW_012103754v1 C 0 I 2 s calJac3.chr14 1424709 38 - 108792865 ---CGGGGAAGG---AAGAGCTGGCGGGACCAACCCCCGC----AGAG-- i calJac3.chr14 C 0 C 0 s otoGar3.GL873658 946452 35 + 5252280 ----AAGAAAGGTTGGG----TGGCAGGACCCACCCC-AC----AGAG-- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1764386 45 + 4416731 -AAGGGGCGTAGAAGGGATGATGGCTTGAACTGATCCAAC----ACAAAA i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 165964 106 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1253796 467 - 7082604 I e cebCap1.NW_016107827v1 1347448 183 + 1864846 I e colAng1.NW_012118821v1 1422406 2125 - 13651311 M e chlSab2.chr14 1503741 4 - 107702431 I e cerAty1.NW_012000820v1 1426246 6 - 10304083 I a score=6228.000000 s hg38.chr2_KI270774v1_alt 158998 1 + 223625 G s panTro5.chr2A 1445820 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1394942 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1419118 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1141926 1 + 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1471307 1 + 108979918 G i rheMac8.chr13 I 2 C 0 s macFas5.chr13 1443754 1 - 111193037 G i macFas5.chr13 I 2 C 0 s macNem1.NW_012011978v1 1471733 1 + 3644372 G i macNem1.NW_012011978v1 I 2 C 0 s chlSab2.chr14 1503745 1 - 107702431 G i chlSab2.chr14 I 4 C 0 s manLeu1.NW_012103754v1 991698 1 - 2200435 G i manLeu1.NW_012103754v1 I 2 C 0 s calJac3.chr14 1424747 1 - 108792865 A i calJac3.chr14 C 0 I 3 s otoGar3.GL873658 946487 1 + 5252280 G i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1764431 1 + 4416731 G i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 165964 106 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1253796 467 - 7082604 I e cebCap1.NW_016107827v1 1347448 183 + 1864846 I e colAng1.NW_012118821v1 1422406 2125 - 13651311 M e cerAty1.NW_012000820v1 1426246 6 - 10304083 I a score=282007.000000 s hg38.chr2_KI270774v1_alt 158999 67 + 223625 ACTGGAG-------GGGCAGAGAAAC--GTGCGGCGCTGCGGGGTCGTC-GCCGGCCTCG---AACTTCCAGAG-TCTTAC- s panTro5.chr2A 1445821 67 + 111504155 ACTGGAG-------GGGCAGCGAAAC--GTGCGGCGCTGCGGGGTCGTC-GCCGGCCTCG---AACTTCTAGAG-TCTTAC- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1394943 67 + 114371477 ACTGGAG-------GGGCAGCGAAAC--GTGCGGCGCTGCGGGGTCGTC-GCCGGCCTCG---AACTTCTAGAG-TCTTAC- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1419119 67 + 1464242 ACTGGAG-------GGGCAGAGAAAC--GTGCGGCGCTGTGGGGTCGTC-GCCGGCCTCG---AACTTCTAGAG-TCTTTC- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1141927 67 + 81552678 ACTGGAG-------GGGCAGAAAAAC--GTGCGGTGCTGTGGGGTCGTC-GCCGGCCTCG---AGCTTCTAGAG-TCTTAC- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1471308 67 + 108979918 ACTAGAG-------GGGCAGAGAAAC--ATGCGGCGCTGCAGGGTCGTC-GCTGGCCTCG---AGCTTCTAGAG-TCTTAA- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1443755 67 - 111193037 ACTAGAG-------GGGCAGAGAAAC--ATGCGGCGCTGCAGGGTCGTC-GCTGGCCTCG---AGCTTCTAGAG-TCTTAA- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1471734 67 + 3644372 ACTAGAG-------GGGCAGAGAAAC--ATGCGGCGCTGCAGGGTCGTC-GCTGGCCTCG---AGCTTCTAGAG-TCTTAA- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1426252 69 - 10304083 ACTAGAG-------GGGCAGAGAAAC--ATGCGGCGCTGCAGGGTCGTCGGCTGGCCTCG---AGCTTCTAGAGTTCTTAA- i cerAty1.NW_012000820v1 I 6 C 0 s chlSab2.chr14 1503746 69 - 107702431 ACTAGAG-------GGGCAGAGAAGCATATGCGGCGCTGCAGGGTCGTC-GCTGGCCTCG---AGCTTCTAGAG-TCTTAA- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 991699 67 - 2200435 ACTAGAG-------GGGCAGAGAAAC--ATGCGGCGCTGCAGGGTCGTC-GCTGGCCTCG---AGCTTCTAGAG-TCTTAA- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1424751 51 - 108792865 GAGGGGA-------AGGCAGAGGGAC--GCGCGGTGC----------------AGCCTCC---AGCTTCTAGAG-TC-TGA- i calJac3.chr14 I 3 C 0 s otoGar3.GL873658 946488 29 + 5252280 ---------------------------------------------------TCGGCTTCGTCCATTATCCAGTG-TCTTTC- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1764432 59 + 4416731 ACCAGAATGGACACAGGCAGAGAAGC--G-----------------ATC-CCGGGCCTAGT--AATTTTTATTG-TTTTTAA i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 165964 106 + 287728 I e mm10.chr12 90025229 193 - 120129022 I e saiBol1.JH378218 1253796 467 - 7082604 I e cebCap1.NW_016107827v1 1347448 183 + 1864846 I e colAng1.NW_012118821v1 1422406 2125 - 13651311 M a score=175040.000000 s hg38.chr2_KI270774v1_alt 159066 35 + 223625 AAAGGGTGCACGGGGGCCCTGGGTGACCTTGAACT s panTro5.chr2A 1445888 35 + 111504155 AAAGGGTGCACGAGGGCCCTGGGTGACCTTGAACT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1395010 35 + 114371477 AAAGGGTGCACGAGGGCCCTGGGTGACCTTGAACT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1419186 35 + 1464242 AAAGGGTGCACGGGGGTCCTGGGTGACCTTGAACT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1141994 35 + 81552678 AAATGGTGCGCGGGGGCCCTGGGTGACCTTGAACT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1471375 34 + 108979918 AAAGGGTGAGCGGG-GCCCTGGGTGACCTTGAACT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1443822 34 - 111193037 AAAGGGTGAGCGGG-GCCCTGGGTGACCTTGAACT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1471801 34 + 3644372 AAAGGGTGAGCGGG-GCCCTGGGTGACCTTGAACT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1426321 31 - 10304083 AAAGGGTGAGCGGG----CCTGGTGACCTTGAACG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1503815 34 - 107702431 AAAGGGTGAGCGGG-GCCCTGGGTGACCTTGAACT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 991766 34 - 2200435 AAAGGGTGAGCGGG-GCCCTGGGTGACCTTGAACT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1424802 34 - 108792865 AAAGCGTTTGCGGGGACCGCTGGTGACCCCGAAC- i calJac3.chr14 C 0 C 0 s otoGar3.GL873658 946517 35 + 5252280 AGAGGATGCACAAGAACCACGGGTGACCTTCATCT i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90025422 33 - 120129022 AAAGGGCACACGAG--CTGAAAGTGACATCTAGTC i mm10.chr12 I 193 I 1 s dasNov3.JH576208 1764491 35 + 4416731 AGAAGATGCCCAAGACCCGTACATAAGCCTGATTT i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 165964 106 + 287728 I e saiBol1.JH378218 1253796 467 - 7082604 I e cebCap1.NW_016107827v1 1347448 183 + 1864846 I e colAng1.NW_012118821v1 1422406 2125 - 13651311 M a score=57463.000000 s hg38.chr2_KI270774v1_alt 159101 6 + 223625 CCCCTT s panTro5.chr2A 1445923 6 + 111504155 CCCCTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1395045 6 + 114371477 CCCCTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1419221 6 + 1464242 CCCCTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1142029 6 + 81552678 CCCCTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1471409 6 + 108979918 CCCCTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1443856 6 - 111193037 CCCCTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1471835 6 + 3644372 CCCCTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1426352 6 - 10304083 CCCCTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1503849 6 - 107702431 CCCCCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 991800 6 - 2200435 CCCCCT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1424836 6 - 108792865 CCCCTT i calJac3.chr14 C 0 C 0 s aotNan1.NW_018513311v1 166070 6 + 287728 CCCCTT i aotNan1.NW_018513311v1 I 106 C 0 s otoGar3.GL873658 946552 6 + 5252280 CTCCTC i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90025456 6 - 120129022 CCCCTT i mm10.chr12 I 1 I 10 s dasNov3.JH576208 1764526 6 + 4416731 TCCATT i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1253796 467 - 7082604 I e cebCap1.NW_016107827v1 1347448 183 + 1864846 I e colAng1.NW_012118821v1 1422406 2125 - 13651311 M a score=305158.000000 s hg38.chr2_KI270774v1_alt 159107 37 + 223625 --TGCCTGCAGCTCCCGGAGGAGGCCCGGCCGGCCGCGG s panTro5.chr2A 1445929 37 + 111504155 --TGCCTGCAGCTCCCGGAGGAGGCCCGGCCGGCCGCGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1395051 37 + 114371477 --TGCCTGCAGCTCCCGGAGGAGGCCCGGCCGGCCGCGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1419227 37 + 1464242 --TGCCTGCAGCTCCCGGAGGAGGCCCGGCCGGCCGCGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1142035 37 + 81552678 --TGCCCGCAGCTCCCGGAGGAGGCCCGGCCGGCCGCGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1471415 36 + 108979918 ---GCCCGCAGCTCCCGGAGGAGGCCCGGCCGGCCGCGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1443862 36 - 111193037 ---GCCCGCAGCTCCCGGAGGAGGCCCGGCCGGCCGCGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1471841 36 + 3644372 ---GCCCGCAGCTCCCGGAGGAGGCCCGGCCGGCCGCGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1426358 36 - 10304083 --CGCCCGCAGCTCCCGGAGGAGG-CCGGCCGGCCGCGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1503855 37 - 107702431 --TGCCCGCAGCTCCCGGAGGAGGCCCGGCCGGCCGCGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 991806 37 - 2200435 --TGCCCGCAGCTCCCGGAGGAGGCCCGGCCGGCCGCGG i manLeu1.NW_012103754v1 C 0 M 530 s calJac3.chr14 1424842 37 - 108792865 --TGTCTGCAGCTCCGCGAGGAGGCCCGGCCAGCTGCGG i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1347631 37 + 1864846 --TGCCCGCAGCTCCGCGAGGAGGCCCGGCCCGCCGCGG i cebCap1.NW_016107827v1 I 183 C 0 s aotNan1.NW_018513311v1 166076 37 + 287728 --TGCCCGCAGCTCCGCGAAGAGGCCCGGCCAGCCGCGG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 946558 37 + 5252280 --TCCTTGCAGCTCCCAGAGAACACCCTGCTAGCCGCGG i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90025472 20 - 120129022 --TCCCTCAAACTCCTCAGGGA----------------- i mm10.chr12 I 10 C 0 s dasNov3.JH576208 1764532 39 + 4416731 TTCCCCGGCAGCTTCCGATCAACGACTCGCTGACCACGG i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1253796 467 - 7082604 I e colAng1.NW_012118821v1 1422406 2125 - 13651311 M a score=2348229.000000 s hg38.chr2_KI270774v1_alt 159144 266 + 223625 GCACC---GCCTGTCTGCCCTTC-TACCGCTCTTCGGCCGCCTG-CGGCACCGGGGACCAAGGCGCGCTCTTT---GGGAACCTGTCCACGGCCAACC-CGCGGCAGCAGATGAACGGGTTGACCTCGTTCCTGGACGCGTCCACCGTGTATGGCAGCTCCCCGGCCCTAGAGAGGCA-GCTGCGGAACTGGA-CCAGTGCCGAAGGGCTGCTCCGCGTCCACGCGCGCCTCCGGGACT-CCGGCCGCGCCTACCTGCCCTTCGTGCCGCCACGCGCG s panTro5.chr2A 1445966 266 + 111504155 GCACC---GCCTGTCTGCCCTTC-TACCGCTCTTCGGCCGCCTG-CGGCACCGGGGACAAAGGCGCGCTCTTT---GGGAACCTGTCCACGGCCAACC-CGCGGCAGCAGATGAACGGGTTGACCTCGTTCCTGGACGCGTCCACCGTGTATGGCAGCTCCCCGGCCCTAGAGAGGCA-GCTGCGGAACTGGA-CCAGTGCCGAAGGGCTGCTCCGCGTCCATGCGCGCCTCCGGGACT-CCGGCCGCGCCTACCTGCCCTTCGCGCCGCCACGCGCG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1395088 266 + 114371477 GCACC---GCCTGTCTGCCCTTC-TACCGCTCTTCGGCCGCCTG-CGGCACCGGGGACAAAGGCGCGCTCTTT---GGGAACCTGTCCACGGCCAACC-CGCGGCAGCAGATGAACGGGTTGACCTCGTTCCTGGACGCGTCCACCGTGTATGGCAGCTCCCCGGCCCTAGAGAGGCA-GCTGCGGAACTGGA-CCAGTGCCGAAGGGCTGCTACGCGTCCATGCGCGCCTCCGGGACT-CCGGCCGCGCCTACCTGCCCTTAGCGCCGCCACGCGCG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1419264 266 + 1464242 GCACC---GCCTGTCTGCCCTTC-TACCGCTCTTCGGCCGCCTG-CGGCACCGGGGACCAAGGCGCGCTCTTT---GGGAACCTGTCCACGGCCAACC-CGCGGCAGCAGATGAACGGGTTGACCTCGTTCCTGGACGCGTCCACCGTGTATGGCAGCTCCCCGGCCCTAGAGAGGCA-GCTGCGGAACTGGA-CCAGTGCCGAAGGGCTGCTCCGCGTCCACGCGCGCCTCCGGGACT-CCGGCCGCGCCTACCTGCCCTTCGCGCCGCCACGCGCG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1142072 266 + 81552678 GCGCC---GCCTGTCTGCCCTTC-TACCGCTCTTCGGCCGCCTG-CGGCACCGGGGACCAAGGCGCGCTCTTC---GGGAACCTGTCCGTGGCCAACC-CGCGGCAGCAGATGAACGGGTTGACCTCATTCCTGGACGCGTCCACCGTGTATGGCAGCTCCCCGGCCCTGGAGAGGCA-GCTGCGGAACTGGA-CCAGCGCAGAGGGGCTGCTCCGCGTCCACGCGCGCCTCCGGGACT-CCGGCCGTGCCTACCTGCCCTTCGCGCCGCCACGCGCG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1471451 266 + 108979918 GCACC---GCCTGTCTGCCCTTC-TACCGCTCTTCGGCCGCCTG-TGGCACCGGGGACCAAGGCGCGCTCTTC---GGGAACCTGTCCACCGCCAACC-CGCGGCAGCAGATGAACGGGCTGACCTCGTTCCTGGACGCGTCCACCGTGTACGGCAGCTCCCCGGCCCTGGAGAGGCA-GCTGCGGAACTGGA-CCAGCGCCGAGGGGCTGCTCCGCGTCCACGCGCGCCTCCGGGACT-CCGGCCGCGCCTATCTGCCCTTCGCGCCGCCACGCGCG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1443898 266 - 111193037 GCACC---GCCTGTCTGCCCTTC-TACCGCTCTTCGGCCGCCTG-TGGCACCGGGGACCAAGGCGCGCTCTTC---GGGAACCTGTCCACCGCCAACC-CGCGGCAGCAGATGAACGGGCTGACCTCGTTCCTGGACGCGTCCACCGTGTACGGCAGCTCCCCGGCCCTGGAGAGGCA-GCTGCGGAACTGGA-CCAGCGCCGAGGGGCTGCTCCGCGTCCACGCGCGCCTCCGGGACT-CCGGCCGCGCCTACCTGCCCTTCGCGCCGCCACGCGCG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1471877 266 + 3644372 GCACC---GCCTGTCTGCCCTTC-TACCGCTCTTCGGCCGCCTG-TGGCACCGGGGACCAAGGCGCGCTCTTC---GGGAACCTGTCCACCGCCAACC-CGCGGCAGCAGATGAACGGGCTGACCTCGTTCCTGGACGCGTCCACCGTGTACGGCAGCTCCCCGGCCCTGGAGAGGCA-GCTGCGGAACTGGA-CCAGCGCCGAGGGGCTGCTCCGCGTCCACGCGCGCCTCCGGGACT-CCGGCCGCGCCTACCTGCCCTTCGCGCCGCCACGCGCG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1426394 265 - 10304083 GCACC---GCCTGTCTGCCCTTCTTACCGCTTCTTCGGCGCCTGTTGGCACCGGAG-CCAAGGCGCGCTCTTC---GGGAACC-GTCCACCGCCAACCGCGCGGCAGCAGATGAACGGGCTGACCTCG-TCCTGGACGCGT-CACCGTGTACGGCAGCTCCGCGCGGCCTGAGAGGCAGGCTGCGGAACTGGACCCAGCGCCGAGGGGCCTCTCCGCG-CCACGCGCGCCTCTGGGACTCCCGGCCGCGCCTACCT-CCCTTCGCGCCGCT-CGCGCG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1503892 269 - 107702431 GCACCGCTGCTTGTCTGCCCTTC-TACCGCTCTTCGGCCGCCTG-TGGCACCGGGGACCAAGGCGCGCTCTTC---GGGAACCTGTCCACCGCCAACC-CGCGGCAGCAGATGAACGGGCTGACCTCGTTCCTGGACGCGTCCACCGTGTATGGCAGCTCCCCGGCCCTGGAGAGGCA-GCTGCGGAACTGGA-CCAGCGCCGAGGGGCTGCTCCGCGTCCACGCGCGCCTCCGGGACT-CCGGCCGCGCCTACCTGCCCTTCGCGCCGCCACGCGCG i chlSab2.chr14 C 0 C 0 s calJac3.chr14 1424879 269 - 108792865 GCCCC---GCCTGCCTGCCCTTC-TACCGCTCAGCCGCTGCCTG-CGGCACTGGGGAGCCGGGCACGCCCTTCCTCGGGAACCTGTCGGAGGCGCCCC-CGCGGCAACAGGTGAACGGGCTGACCTCGTTCCTGGACGCGTCCACCGTGTACGGCGGCTCCCCGGGCCTGGAGCGGCA-GCTGCGGAACTGGA-CCAGCGCCGAGGGGCTGCTCCGCGTCCACGCGCGACACAGCGACT-CCGGCCGCGCCTACCTGCCCTTCGCGCCACCACAcgcg i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1347668 269 + 1864846 GCTCC---GCCTGCCTGCCCTTC-TACCGCTCGGCGGCCGCCTG-CGGCACCGGGGAGGCGGGCACGCCCTTCCTGGGGAACCTGTCGGAGGCGCCCC-CGCGGCAGCAGGTGAACGGGCTGACCTCGTTCCTGGACGCGTCCACCGTGTACGGCGGCTCCCCAGGCCTGGAGCGGCG-GCTGCGGAACTGGA-CCAGCGCTGAGGGGCTGCTCCGCGTCCACGTGCGACACCGCGACT-CCGGCCGCGCCTACCTGCCCTTCGcgccgccacgcgcg i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 166113 267 + 287728 GCCCC---GCCTGCCTGCCCTTC-TACCGCTCCGCGGCCGCCTG-CGGCACCGGGGAGCCGGGCGCGCCCTTCCTGGGGAACCTGTCGGAGGCGCCCC-CGCGGCAGCAGGTGAACGGGCTGACCTCGTTCCTGGACGCGTCCACCGTGTACGGCGGCTCCCCGGGCCTGGAGCGGCA-GCTGCGGAACTGGA-CCAGCGCCGAGGGGCTGCTCCGCGTCCACGCGCGACACCGCGACT-CCGGCCGCGCCTACCTGCCCTT--CGGCGCCACGCGCG i aotNan1.NW_018513311v1 C 0 I 50 s otoGar3.GL873658 946595 266 + 5252280 GCCCT---GCCTGTCTGCCCTTT-TACCGCTCATCCGCCGCCTG-CGGCACCGGGGACCAAGGCGCGCTCTTT---GGCAACCTGTCCAAAGCCAACC-CGCGGCAGCAGATGAACGGGCTGACCTCTTTCCTGGACGCCTCCACGGTGTACGGCAGCTCCCCTGCCTCGGAGAAGCA-GCTGCGGAACTGGA-CCAGCGCCGAGGGGCTGCTGCGGGTCAACACGCGCCACCAGGACG-CTGGCCGCGCCTACTTGCCTTTCGCACCGCCGCCTGCG i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90025492 254 - 120129022 CCACT---GCATGCCTGCCTTTC-TACCGCTCCTCCGCCGCTTG-TGGCACTGGGGACCAAGGTGCTCTCTTT---GGCAACCTGTCTGCAGCCAATC-CGAGGCAGCAGATGAATGGCTTGACCTCCTTCCTTGATGCTTCCACTGTGTACGGCAGCTCCCCTGGCGTTGAGAAGCA-GCTGCGCAACTGGA-GCAGCTCGGCAGGACTGCTGCGTGTCAACACTCTCCACCTAGATG-CTGGCCGTGCCTACCTGCCCTTCGCA------------ i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1764571 266 + 4416731 GCACC---CAGTGTCTGCCCTTT-TACCGCTCTTCAGCCGCCTG-CGGCACCGGGGACCAAGGAGCCGTCTTT---GGAAACTTCTCCACGTCAAACC-CGAGGCAACAGATGAACGGGTTGACCTCGTTCCTCGACGCATCCACCGTGTACGGCAGCACGCCAGCCTTGGAAAAGCT-GCTCCGCAACTGGA-GCAGCGAGGACGGGCTGCTGCGGGTCAACGCGCGCTACCGCGACG-GCGGCCGCGCCTACCTGCCCTTcgcgccgcgccgcggg i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1253796 467 - 7082604 I e colAng1.NW_012118821v1 1422406 2125 - 13651311 M e manLeu1.NW_012103754v1 991843 530 - 2200435 M a score=317139.000000 s hg38.chr2_KI270774v1_alt 159410 48 + 223625 CCTGCGG-CCTGTGCGCCCGAGCCCGGCATCCCCGGAGAG--ACCCGCGGG s panTro5.chr2A 1446232 48 + 111504155 CCTGCGG-CCTGTGCGCCCGAGCCCGGCATCCCCGGAGAG--ACCCGCGGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1395354 48 + 114371477 CCTGCGG-CCTGTGCGCCCGAGCCCGGCATCCCCGGAGAG--ACCCGCGGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1419530 48 + 1464242 CCTGCGG-CCTGTGCGCCCGAGCCCGGCATCCCCGGAGAG--ACCCGCGGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1142338 48 + 81552678 CCTGCGG-CCTGTGCGCCCGAGCCCGGCATCCCCGGAGAG--ACCCGCGGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1471717 48 + 108979918 CCCGCGG-CCTGTGCGCCTGAGCCCGGCATCCCCGGAGAG--ACCCGCGGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1444164 48 - 111193037 CCCGCGG-CCTGTGCGCCTGAGCCTGGCATCCCCGGAGAG--ACCCGCGGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1472143 48 + 3644372 CCCGCGG-CCTGTGCGCCTGAGCCCGGCATCCCCGGAGAG--ACCCGCGGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1426659 47 - 10304083 CCCGCGGCCCTGTGCGCCTGAGCCC-GCAT-CCCGGAGAG--ACCCGCGGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1504161 48 - 107702431 CCCGCGG-CCTGTGCGCCTGAGCCCGGCATCCCCGGAGAG--ACCCGCGGG i chlSab2.chr14 C 0 C 0 s calJac3.chr14 1425148 48 - 108792865 cccgcgg-cctgcgcgcccgaacccggcgccccgggagcg--gcccgcggc i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1347937 48 + 1864846 cccgcgg-cctgcgcacccgaacccggcgcccccggagcg--gcccgcggc i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 946861 48 + 5252280 CCCGCGG-TCTGCGCGCCAGACCCCAGCGTCCCCGGCGCG--CCCCGAGCC i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90025746 48 - 120129022 ACAGCCG-CCTGCGCTCCAGAGCCTGGTACCCCACGCACC--AACCGCACG i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1764837 48 + 4416731 ccctcgc-cctgcgcgcaggagcccggcgcggcgggcgcggAGCCCGTG-- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 166380 50 + 287728 I e saiBol1.JH378218 1253796 467 - 7082604 I e colAng1.NW_012118821v1 1422406 2125 - 13651311 M e manLeu1.NW_012103754v1 991843 530 - 2200435 M a score=1061038.000000 s hg38.chr2_KI270774v1_alt 159458 95 + 223625 CCCTGC--TTCCTGGCCGGAGACGGCCGCGCCAG-CGAGG---------------------------------------------------------TCCCCTCCCTGACG-GCACTGCACA-CGCTGTGGCTGCGCGAGCAC-AACCGCCTGGCCGC s panTro5.chr2A 1446280 95 + 111504155 CCCTGC--TTCCTGGCCGGAGACGGCCGCGCCAG-CGAGG---------------------------------------------------------TCCCCTCCCTGACG-GCACTGCACA-CGCTGTGGCTGCGCGAGCAC-AACCGCCTGGCCGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1395402 95 + 114371477 CCCTGC--TTCCTGGCCGGAGACGGCCGCGCCAG-CGAGG---------------------------------------------------------TCCCCTCCCTGACG-GCACTGCACA-CGCTGTGGCTGCGCGAGCAC-AACCGCCTGGCCGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1419578 95 + 1464242 CCCTGC--TTCCTGGCCGGAGACGGCCGCGCCAG-CGAGG---------------------------------------------------------TCCCCTCCCTGACG-GCACTGCACA-CGCTGTGGCTGCGCGAGCAC-AACCGCCTGGCCGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1142386 95 + 81552678 CCCTGC--TTCCTGGCCGGGGACGGCCGCGCCAG-CGAGG---------------------------------------------------------TCCCCTCCCTGACG-GCGCTGCACA-CGCTGTGGCTGCGCGAGCAC-AACCGCCTGGCCGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1471765 95 + 108979918 CCCTGC--TTCCTGGCCGGGGACGGCCGCGCCAG-CGAGG---------------------------------------------------------TCCCCTCCCTGACG-GCGCTGCACA-CGCTGTGGCTGCGCGAGCAC-AACCGCCTGGCCGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1444212 95 - 111193037 CCCTGC--TTCCTGGCCGGGGACGGCCGCGCCAG-CGAGG---------------------------------------------------------TCCCCTCCCTGACG-GCGCTGCACA-CGCTGTGGCTGCGCGAGCAC-AACCGCCTGGCCGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1472191 95 + 3644372 CCCTGC--TTCCTGGCCGGGGACGGCCGCGCCAG-CGAGG---------------------------------------------------------TCCCCTCCCTGACG-GCGCTGCACA-CGCTGTGGCTGCGCGAGCAC-AACCGCCTGGCCGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1426706 97 - 10304083 CCCTGC--TTCCTGGCCGGGGAC-GCCGCGCCAG-CGAGG---------------------------------------------------------TCCCCTCCCTGACGCGCGCTGCACAGCTGTGTGGCTGCGCGAGCACAAACCGCCTGGCCGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1504209 95 - 107702431 CCCTGC--TTCCTGGCCGGGGACGGCCGCGCCAG-CGAGG---------------------------------------------------------TCCCCTCCCTGACG-GCGCTGCACA-CGCTGTGGCTGCGCGAGCAC-AACCGCCTGGCCGC i chlSab2.chr14 C 0 C 0 s calJac3.chr14 1425196 95 - 108792865 cccTGC--TTCCTGGCCGGGGACGGCCGCGCCAG-CGAGG---------------------------------------------------------TCCCCGCCCTGACG-GCGCTGCACA-CGCTGTGGCTGCGGGAACAC-AACCGCCTGGCCGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1254263 95 - 7082604 CCCTGC--TTCCTGGCCGGGGACGGCCGCGCCAG-CGAGG---------------------------------------------------------TCCCCGCCCTGACG-GCGCTGCACA-CGCTGTGGCTGCGCGAACAC-AACCGCCTGGCCGC i saiBol1.JH378218 I 467 C 0 s cebCap1.NW_016107827v1 1347985 95 + 1864846 ccCTGC--TTCCTGGCCGGGGACGGCCGCGCCAG-CGAGG---------------------------------------------------------TCCCGGCCCTGACG-GCGCTGCACA-CACTGTGGCTGCGCGAACAC-AACCGCCTGGCCGC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 166430 154 + 287728 CCCTGCTTTTCCTGGCC-GGGACGGCCGCGCCAGCCGAGGTCCCGGCCCCTTGCGGGGCGCGCCTGCAACACNNNNNNNNNNNNNNNNNNNNNNNNNTCCCGGCCCTGACG-GCGCTGCACA-CGCTGTGGCTGCGCGAACAC-AACCGCCTGGCCGC i aotNan1.NW_018513311v1 I 50 C 0 s otoGar3.GL873658 946909 95 + 5252280 CCCTGC--TTCCTGGCCGGGGACGGCCGCGCCAG-CGAGG---------------------------------------------------------CACCCTCCCTGACG-GCCGTGCACA-CGCTGTGGCTGCGTGAGCAC-AACCGCCTGGCCCT i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90025794 95 - 120129022 CCCTGC--TTCCTGGCTGGAGACGGTCGCGCCAG-TGAGG---------------------------------------------------------TCCCTGCCCTGGCA-GCGGTACACA-CCTTGTGGCTGCGCGAGCAC-AACCGCCTGGCTTC i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1764885 95 + 4416731 GACTGC--TTCCTGGCCGGGGACGGCCGCGCCAG-CGAGG---------------------------------------------------------TCATCTCCCTGACG-GCCGTGCACA-CGCTGTGGCTGCGCGAGCAC-AACCGCCTGGCCGC i dasNov3.JH576208 C 0 C 0 e colAng1.NW_012118821v1 1422406 2125 - 13651311 M e manLeu1.NW_012103754v1 991843 530 - 2200435 M a score=929446.000000 s hg38.chr2_KI270774v1_alt 159553 73 + 223625 GGCGC-TCAAGGCCCTCAAT--GCGCACTGGAGCGCGGACGCCGTGTACCAGGAGGCGCGCAAGGTCGTGGGCGCT s panTro5.chr2A 1446375 73 + 111504155 GGCGC-TCAAGGCCCTCAAT--GCGCACTGGAGCGCGGACGCCGTGTACCAGGAGGCGCGCAAGGTCGTGGGCGCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1395497 73 + 114371477 GGCGC-TCAAGGCCCTCAAT--GCGCACTGGAGCGCGGACGCGGTGTACCAGGAGGCGCGCAAGGTCGTGGGCGCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1419673 73 + 1464242 GGCGC-TCAAGGCCCTCAAT--GCGCACTGGAGCGCAGACGCCGTGTACCAGGAGGCGCGCAAGGTCGTGGGCGCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1142481 73 + 81552678 GGCAC-TCAAGACCCTCAAC--GCGCACTGGAGCGCGGACGCCGTGTACCAGGAGGCGCGCAAGGTCGTGGGCGCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1471860 73 + 108979918 GGCGC-TCAAGGCCCTCAAC--GCGCACTGGAGCGCGGACGCCGTGTACCAGGAGGCGCGCAAGGTCGTGGGCGCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1444307 73 - 111193037 GGCGC-TCAAGGCCCTCAAC--GCGCACTGGAGCGCGGACGCCGTGTACCAGGAGGCGCGCAAGGTCGTGGGCGCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1472286 73 + 3644372 GGCGC-TCAAGGCCCTCAAC--GCGCACTGGAGCGCGGACGCCGTGTACCAGGAGGCGCGCAAGGTCGTGGGCGCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1426803 75 - 10304083 GGCGCGTCAAGGCCCTCAACCGGCGCACT-GAGCGCGGACGCCGTGTACCAGGAGGCGCGCAAGGTCGTGGGCGCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1504304 73 - 107702431 GGCGC-TCAAGGCCCTCAAC--GCGCACTGGAGCGCGGACGCCGTGTACCAGGAGGCGCGCAAGGTCGTGGGCGCC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1424534 73 - 13651311 GGCGC-TCAAGGCCCTCAAC--GCGCACTGGAGCGCGGACACCGCGTACCAGGAGGCGCGCAAGGTCGTGGGCGCC i colAng1.NW_012118821v1 M 2125 C 0 s calJac3.chr14 1425291 73 - 108792865 GGCGC-TCAAGGCCCTCAAC--GCGCACTGGAGCGCGGACGCCGTCTACCAGGAGGCGCGCAAGGTCGTGGGCGCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1254358 73 - 7082604 GGCGC-TCAAGGCCCTCAAC--GCGCACTGGAGCGCGGACACCGTCTACCAAGAGGCGCGCAAGGTCGTGGGCGCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1348080 73 + 1864846 GGCGC-TCAAGGCCCTCAAT--GCGCACTGGAGCGCGGAAGCCGTGTACCAAGAGGCGCGCAAGGTCGTGGGCGCC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 166584 73 + 287728 GGCGC-TCAAGGCCCTCAAC--GCGCACTGGAGCGCGGACGCCGTCTACCAGGAGGCGCGCAAGGTCGTGGGCGCC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 947004 73 + 5252280 GGCGC-TCAAGGCCCTTAAC--GCACACTGGAGCGCAGACACCGTGTACCAGGAGGCGCGCAAAGTGGTGGGCGCC i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90025889 73 - 120129022 GGCCT-TCAAGGCCATTAAC--AAGCACTGGAGCGCCAACACTGCCTACCAGGAGGCGCGCAAGGTGGTAGGGGCA i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1764980 73 + 4416731 CGCGC-TGCGGGCTCTCAAC--GCGCACTGGAGCGCCGACACCGCCTACCAGGAGGCGCGCAAAATCGTGGGCGCC i dasNov3.JH576208 C 0 C 0 e manLeu1.NW_012103754v1 991843 530 - 2200435 M a score=399775.000000 s hg38.chr2_KI270774v1_alt 159626 46 + 223625 CTGCACCAGGTGCGC-----------GGGGTG-------GTCCTGGGCGCCCT-----GGGTG-GCTGCG s panTro5.chr2A 1446448 46 + 111504155 CTGCACCAGGTGCGC-----------GGGGTG-------GTCCTGGGCGCCCT-----GGGTG-GCTGCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1395570 46 + 114371477 CTGCACCAGGTGCGC-----------GGGGTG-------GTCCTGGGCGCCCT-----GGGTG-GCTGCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1419746 46 + 1464242 CTGCACCAGGTGCGC-----------GGGGTG-------GTCCTGGGCGCCCT-----GGGTG-GCTGCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1142554 45 + 81552678 CTGCACCAGGTGCGC-----------GGGGTG-------GTCCTGGGCGCCCT-----GGGTG-GCTGC- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1471933 46 + 108979918 CTGCACCAGGTGCGC-----------TGGGTG-------GTCCTGGGCGCCCT-----GGGTG-GTCGCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1444380 46 - 111193037 CTGCACCAGGTGCGC-----------GGGGTG-------GTCCTGGGCGCCCT-----GGGTG-GCCGCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1472359 46 + 3644372 CTGCACCAGGTGCGC-----------GGGGTG-------GTCCTGGGCGCCCT-----GGGTG-GCCTCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1426878 44 - 10304083 CTGCA-CAGGTGCGC-----------GGG--G-------GCTCCTGGCGCCCT-----GGGTGCGCAGCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1504377 46 - 107702431 CTGCACCAGGTGCGC-----------GGGGTG-------GTCCTGGGCCCCCT-----GGGTG-GCCGCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 992374 46 - 2200435 CTGCACCAGGTGCGC-----------GGGGTG-------GTCCTGGGCGCCCT-----GGGTG-GCCGCA i manLeu1.NW_012103754v1 M 530 C 0 s colAng1.NW_012118821v1 1424607 46 - 13651311 CTGCACCAGGTGCGC-----------GGGGTG-------GTCCTGGGAGCCCT-----GGGTG-GCCGCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1425364 42 - 108792865 CTGCACCAGGTGCGC-----------GGGGTG-------GTCCTGGGTGCCCC-----GAGTG-GC---- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1254431 42 - 7082604 CTGCACCAGGTGCGC-----------GGCGTC-------GTCCTGGGCGCCCC-----GGGTG-GC---- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1348153 46 + 1864846 CTGCACCAGGTGCGC-----------GGGGTG-------GTCCTGGGCGCCTC-----GCGTG-GCTGCG i cebCap1.NW_016107827v1 C 0 I 16 s aotNan1.NW_018513311v1 166657 47 + 287728 CTGCACCAGGTGCGTG---------GGGGGCG-------GTCCCGGGCGCCCC-----GGGCG-GCTGC- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 947077 56 + 5252280 CTGCACCAGGTGCGCGCAT------AGGGGTGCAGGCCACTCCCGGGAGCCGC-----GTGTG-GGCG-- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90025962 41 - 120129022 CTGCACCAGGTATGTGCCTCTGTGCAGGGGCG-------GTACAGACA---------------------- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1765053 46 + 4416731 CTGCACCAGGTGTGC-----------GCAA-A-------ATCGCGGGCGCCCTGCACCGGGTG-TG---- i dasNov3.JH576208 C 0 C 0 a score=351185.000000 s hg38.chr2_KI270774v1_alt 159672 61 + 223625 GGCAAAGCGGGGGGCG--C---------------CTCG---TGTGGG--TGCGCAGCATCGTGGCTTCTCTCTCCCAGGTACT s panTro5.chr2A 1446494 61 + 111504155 GGCAAAGCGGGGGGCG--C---------------CTCG---TGTGGG--TGCGCAGCATCGTGGCTTCTCTCTCCCAGGTACT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1395616 61 + 114371477 GGCAAAGCGGGGGGCG--C---------------CTCG---TGTGGG--TGCGCAGCATCGTGGCTTCTCTCTCCCAGGTACT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1419792 61 + 1464242 GGCAAAGCGGGGGGCG--C---------------CTCG---TGTGGG--TGCGCAGCATCGTGGCTTCTCTCTCCCAGGTACT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1142599 61 + 81552678 GGCAAAGCCGGGGGCG--C---------------CTCG---TGTGGG--TGTGCAGAATCGTGGCTTCTGTGTCTCAGGTACT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1471979 61 + 108979918 TGCAAAGCGGGGGGCG--C---------------CTCA---TGTGGG--TGCGCAGAATCGTGGGTTCTCTGTCCCAGGTACT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1444426 61 - 111193037 TGCAAAGCGGGGGGCG--C---------------CTCA---TGTGGG--TGCGCAGAATCGTGGGTTCTCTGTCCCAGGTACT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1472405 61 + 3644372 TGCAAAGCGGGGGGCG--C---------------CTCA---TGTGGG--TGCGCAGAATCGTGGGTTCTCTGTCCCAGGTACT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1426922 58 - 10304083 TGCAAAGCGGGGGGAGGCC---------------TCCA---TGTGGGGTGGCGCAGAATCGTGGGTTCTCT-------GTACT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1504423 60 - 107702431 TGCAAAGCGGGGGCA---C---------------CTCA---TGTGGG--TGCGCAGAATCGTGGGTTCTCTGTCCCAGGTACT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 992420 61 - 2200435 TGCAAAGCGGGGGGAG--C---------------CTCA---TGTGGG--TGCGCAGAATCGTGGGTTCTCTGTCCCAGGTACT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1424653 60 - 13651311 TGCAAAGCGGGGG-CG--C---------------CTCA---TGTGGG--TGCGCAGAATCGTGGGTTCTCTGTCCCAGGTACT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1425406 34 - 108792865 -------------------------------------------------TGCGCAGAGTCACGGGGTCTCTGCCCCAGGCGTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1254473 34 - 7082604 -------------------------------------------------TGCGCAGAATCACGGGGTCTCTGCCCCAGGCGCG i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 166704 61 + 287728 GGCAAAGCGGTGGGCG--C---------------CTCG---CGTGGC--TGCGCAGAGTCACGGGCTCTCTGCCCCAGGCACG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 947133 70 + 5252280 ------CCCGGAGTCG--CCATAGGGCCACTGCACACA---CAGGCG--GGCGCAGAATAGCTGGTGCCCTGCCCCAGAGGCG i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90026003 56 - 120129022 GGAAAACCTGGATGCT--C---------------CTAA---GATGTG--TCCGCAGGGCCATTG----TGAGCCCAGGGGAG- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1765099 64 + 4416731 CGCAAAATCGAGGGCG--C---------------CCTGCACCGGGTG--TGCGCAAAATCGCGGGCGCCCTGCACCGGGTGTG i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1348199 16 + 1864846 I a score=843874.000000 s hg38.chr2_KI270774v1_alt 159733 117 + 223625 TGCA-CAG-----CCATCATGGGCG------------CCC-ACA-TGGGTGAGCTCCAGGTCGTGGG-GCCCTGT-----GTGGGTGCGCAGTCCTGCTGGGC-----GCCCTGCA-TGGGCGTGTGGAGGGTCATCGTGAGC-TCCTGT s panTro5.chr2A 1446555 117 + 111504155 TGCA-CAG-----CCATCATGGGCA------------CCC-ACA-TGGGTGAGCTCCAGCTCGTGGG-GCCCTGT-----GTGGGTGCGCAGTCCTGCTGGGC-----ACCCTGCA-TGGGCGTGTGGAGGGTCATCGTGAGC-TCCTGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1395677 117 + 114371477 TGCA-CAG-----CCATCATGGGCG------------CCC-ACA-TGGGTGAGCTCCAGCTCGTGGG-GCCCTGT-----GTGGGTGCACAGTCCTGCTGGGC-----GCCCTGCA-TGGGCGTGTGGAGGGTCATCGTGAGC-TCCTGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1419853 117 + 1464242 TGCA-CAG-----CCATCATGGGCG------------CCC-ACA-TGGGTGAGCTCCAGGTCGTGGG-GCCCTGT-----GTGGGTGTGCAGTCCTGCTGGGC-----GCCCTGCA-TGGGCGTGTGGAGGGTCATCGTGAGC-TCCTGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1142660 117 + 81552678 TGCA-CAG-----CCATCATGGTCG------------CCC-ACA-TGGGTGTGCTCCAGGTCGTGGG-GCCCTGT-----GTGGGTGCGCAGTCATGCTGGGC-----GCCCTGCA-TGGGCGTGTGGAGGGTCATTGTGAGC-TTCTGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1472040 117 + 108979918 TGCA-CAG-----CCATCAGGGGCG------------CCC-ACA-TGGGTGAGCCCGAGGTCGTGGG-GCCCTGT-----GTGGGTGCGCAATCATGGTGGGC-----GCCCTTCA-TGGGTGTGTGGAGGGTCATCGTGAGC-TCCTGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1444487 117 - 111193037 TGCA-CAG-----CCATCAGGGGCG------------CCC-ACA-TGGGTGAGCCCGAGGTCGTGGG-GCCCTGT-----GTGGGTGCGCAATCATGGTGGGC-----GCCCTTCA-TGGGTGTGTGGAGGGTCATCGTGAGC-TCCTGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1472466 117 + 3644372 TGCA-CAG-----CCATCAGGGGCG------------CCC-ACA-TGGGTGAGCCCGAGGTCGTGGG-GCCCTGT-----GTGGGTGCGCAATCATGGTGGGC-----GCCCTTCA-TGGGTGTGTGGAGGGTCATCGTGAGC-TCCTGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1426980 111 - 10304083 TGCAGCAG-----CCATCAGGGGCG------------CCC-ACA-TGGGTGAGCCTGAGGTC------------------GTGGGTGCGCAATCATGGTGGGCGGGCGGCCCTTCA-TGGGTGTGTGGAGGGTCATCGTGAGC-TCCTGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1504483 117 - 107702431 TGCA-CAG-----CCATCGTGGGCG------------CCC-ACA-TGGGTGAGCCCGAGGTCGTGGG-GCCCTGT-----GTGGGTGCGCAATCATGGTGGGC-----ACCCTTCA-TGGGTGTGTGGAGGGTCATCGTGAGC-TCCTGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 992481 117 - 2200435 TGCA-CAG-----CCCTCAGGGGCG------------CCC-ACA-TGGGTGAGCCCGAGGTCGTGGG-GCCCTGT-----GTGGGTGCGCAATCATGGTGGGC-----GCCCTTCA-TGGGTGTCTGGAGGGTCATCGTGAGC-TCCTGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1424713 100 - 13651311 TGCA-CAG-----CCATCATGGGCG------------CCC-ACG-TGGGTGAGCCCGAGGTCGTGGG-GCTTTGT----------------------GTGGGC-----GCCCTTCA-TGGGTGTGTGGAGGGTCATCGTGAGC-TCCTGT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1425440 88 - 108792865 TGCA-CAG-----CCATCGTGGGCG------------CCC-ACC-TGGGTGAGCTCAAGGTCG-----------------------------------TGGGC-----GCCTTGCG-TGGGCGTGGGGAGGGTCATCGTGGGC-TCCTGT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1254507 88 - 7082604 TGCA-AAG-----CCATCGTGGGCG------------CCC-ACC-TGGGTGAGCTCAAGGTCG-----------------------------------TGGGT-----GCCTTGCG-TGGGTGGGGGGAGGGTCATCGTGGGC-TCCTGT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1348215 88 + 1864846 TGCA-CAG-----CCATTGTGGGCG------------CCC-ACC-TGGGTAAGCTCAAGGCCG-----------------------------------TGGGT-----GCCTTGCG-TGGGCGTGGGGAGGGTCATCGTGGGC-TCCTGT i cebCap1.NW_016107827v1 I 16 C 0 s aotNan1.NW_018513311v1 166765 88 + 287728 TGCA-CAG-----CCATCGTGGGCA------------CCC-ACC-TGGGTGAGCTCAAGGTCG-----------------------------------TGGGC-----GCCTTGCG-TGGGCGTGGGGAGGGCCATCGTGGGC-TCCTGT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 947203 113 + 5252280 CACA-AAG-----TCGCTGTGGGCGCTCTCTACTGGCCCT-GCA-TGGGTGCGGATAGGGTCATTG----CCAGT----------------ACCCTGCTCACC-----GCCCCCCA-AAGGTCCTCAGCCAGCC--CGTGGGA-TCCTGT i otoGar3.GL873658 C 0 I 10 s mm10.chr12 90026059 90 - 120129022 TATC-CAGTGGGACCACCATGGGCT------------TTC---------TTAGTTTCTGACAGTGTC-ACCT--------------------------TGGGA-----TATTTAAG-TGGGGATGTCCA----CAGCACAAGT-TTATGT i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1765163 118 + 4416731 CGCA-AAA--------TCGAGGGCG------------CCCTGCACCGGGTGTGCGCAAAATCGCGGGCGCCCTGCACCGGGTGTGCGCAAAGTCG---CGGGC-----GCCCTGCACCGGGTGTGCGCAAAGTC---GCGGGCGCCCTGC i dasNov3.JH576208 C 0 C 0 a score=54497.000000 s hg38.chr2_KI270774v1_alt 159850 5 + 223625 GCAGG s panTro5.chr2A 1446672 5 + 111504155 GCAGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1395794 5 + 114371477 GCAGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1419970 5 + 1464242 GCAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1142777 5 + 81552678 GCAGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1472157 5 + 108979918 GCAGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1444604 5 - 111193037 GCAGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1472583 5 + 3644372 GCAGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1427091 5 - 10304083 GCAGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1504600 5 - 107702431 GCAGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 992598 5 - 2200435 GCAGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1424813 5 - 13651311 GCAGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1425528 5 - 108792865 GCAGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1254595 5 - 7082604 GCAGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1348303 5 + 1864846 GCAGG i cebCap1.NW_016107827v1 C 0 I 1 s aotNan1.NW_018513311v1 166853 5 + 287728 GCAGG i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90026149 3 - 120129022 -GAG- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1765281 5 + 4416731 ACCGG i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 947316 10 + 5252280 I a score=3225.000000 s hg38.chr2_KI270774v1_alt 159855 1 + 223625 G s panTro5.chr2A 1446677 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1395799 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1419975 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1142782 1 + 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1472162 1 + 108979918 G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1444609 1 - 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1472588 1 + 3644372 G i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1427096 1 - 10304083 G i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1504605 1 - 107702431 G i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 992603 1 - 2200435 G i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1424818 1 - 13651311 G i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1425533 1 - 108792865 C i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1254600 1 - 7082604 C i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 166858 1 + 287728 C i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1765286 1 + 4416731 G i dasNov3.JH576208 C 0 I 1309 e mm10.chr12 90026152 0 - 120129022 C e cebCap1.NW_016107827v1 1348308 1 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I a score=127116.000000 s hg38.chr2_KI270774v1_alt 159856 19 + 223625 GCCGAAGGGTA--ACTCCG-GA s panTro5.chr2A 1446678 19 + 111504155 GCCGAAGGGTA--ACTCCG-GA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1395800 19 + 114371477 GCCGAAGGGTA--ACTCCG-GA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1419976 19 + 1464242 GCCGAAGGGTA--ACTCCG-GA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1142783 19 + 81552678 GCCGAAGGGTA--ACTCCG-GA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1472163 19 + 108979918 GCCGAAGGGTA--ACTCCA-GC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1444610 19 - 111193037 GCCGAAGGGTA--ACTCCA-GC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1472589 19 + 3644372 GCCGAAGGGTA--ACTCCA-GC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1427097 22 - 10304083 ACCGAAGGGTAAGACTCCAGGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1504606 19 - 107702431 GCCGAAGGGTA--ACTCCA-GC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 992604 19 - 2200435 GCCGAAGGGTA--ACTCCA-GC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1424819 19 - 13651311 GCCAAAGGGTA--ACTCCA-GC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1425534 19 - 108792865 GCCCAGGGGTA--ACTGCG-GC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1254601 19 - 7082604 GCCTAGGGATA--CCTCGG-GC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 166859 19 + 287728 GCCTAGGGGTA--ACTCTG-GC i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90026152 16 - 120129022 --CAAAGTGCT--CCTACT-A- i mm10.chr12 C 0 C 0 e cebCap1.NW_016107827v1 1348308 1 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I a score=907162.000000 s hg38.chr2_KI270774v1_alt 159875 101 + 223625 GCT-GGCGGCCCT--CCGGGGC-CCCTCTGTCC---CACCTGCTTACCCTCCAGCCGGCTGGTGATTATCCCACCAAGAC--CCAACAACCACAGC--CCCACAACAGTGGC s panTro5.chr2A 1446697 101 + 111504155 GCT-GGCGGCCCT--CCGGGGC-CCCTCTGTCC---CACCTGCTTACCCTCCAGCAGGCTGGTGATTATCCCACCAAGAC--CCAACAACCACAGC--CCCCCAACAATGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1395819 101 + 114371477 GCT-GGCGGCCCT--CCGGGGC-CCCTCTGTCC---CACCTGCTTACCCTCCAGCAGGCTGGTGATTATCCCACCAAGAC--CCAACAACCACAGC--CCCCCAACAATGGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1419995 101 + 1464242 GCT-GGCGGCCCT--CCGGAGC-CCCTCTGTCC---CACCTGCTTACCCTCCAGCCAGCTGGTGATTATCCCACCAAGAC--CCAACAACCACAGC--CCCCCAACAATGGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1142802 102 + 81552678 GCC-GGCGGCCCT--CGGGGGC-CCCTCTGTCC---CACCTGCTTACCCTCCAGCCAGCTGGTGATTATCCCACCAAGACA-CCAACAACCACAGC--CCCCCAACAATGAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1472182 102 + 108979918 GCT-GGCGGCCCC--CCGGGGC-CCGTCTGTCC---CACCTGCTTACCCTTCAGCTGGCTGGTGATTATCCCACCAAGACA-CCAATAACCACAGC--CCCCTAACAATGGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1444629 102 - 111193037 GCT-GGCGGCCCC--CCGGGGC-CCCTCTGTCC---CACCTGCTTACCCTTCAGCTGGCTGGTGATTATCCCACCAAGACA-CCAATAACCACAGC--CCCCCAACAATGGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1472608 102 + 3644372 GCT-GGCGGCCCC--CCGGGGC-CCCTCTGTCC---CACCTGCTTACCCTTCAGCTGGCTGGTGATTATCCCACCAAGACA-CCAATAACCACAGC--CCCCCAACAATGGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1427119 106 - 10304083 GCTCGGCGGCGCCTTCCGGGGCGCCCTCTGTCC---CACCTGCTTACCCTCCAGCTGGCTGGTGATTATCCCACCAAGACA-CCAATAACCACAGC--CCCCCAACAACGGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1504625 102 - 107702431 GCT-GGCCTCCCT--CAGGGGC-CCCTCTGTCC---CACCTGCTTACCCTCCAGAGGGCTGGTGATTATCCCACCAAGACA-CCAATAACCACAGC--CCCCCAACAATGGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 992623 102 - 2200435 GCT-GGCGGCCCT--TCGGGGC-CCCTCTGCCC---CACCTGCTTACCCTCCAGCTGGCTGGTGATTATCCCGCCAAGACA-CCAATAACCACAGC--CCCCCAACAACGGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1424838 102 - 13651311 GCT-GGCGGCCCT--CCGGGGC-CCCTCTGTCC---CACCTGCTTACCCTCCCGCTGGCTGGTGACTATCCCACCAAGAGA-CCAATAACCACAGC--CCCCCAACAATGGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1425553 99 - 108792865 GCT-GGCGGCCCT--CCCCGGC-CCCTCTGTCC---CACCTGCTTACCGGCCCGCCAGCTGGTGATTATCCGACCGAGACA-CCAACG---ACAGC--CACCCAACAATGGT i calJac3.chr14 C 0 I 210 s saiBol1.JH378218 1254620 101 - 7082604 GCT-GGCGGCCCT--CCCCGGC-CCCTCTGTCC---CACCTGCTCACCGGCCCGCCAGCTGGTGATTATCCGACCGAGACA-CCAAAGACCACAGC--CACCC-ACAATGGC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1348309 102 + 1864846 GCT-GGCGGCCCT--CCCCGGC-TCCTCTGTCC---CACCTGCCCACCGGCCTGCCAGCTAGTGATTATCCGACTGAGACA-CCAACGACCACAGC--CACCCAACAATGGC i cebCap1.NW_016107827v1 I 1 C 0 s aotNan1.NW_018513311v1 166878 102 + 287728 TCT-GGCGGCTCT--CCCCGGC-CCCTCTGTCC---CACCTGCTCACCGGCCCGCCAGCTGGTGATTATCCGACCGAGACA-CCAACGGCCACAGC--CACCCAACAATGGC i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90026168 96 - 120129022 CCA-GGAGGCTCC--TTGTGGC-TTTGTTGTCCAAGCACTGGGTCATCT---------CTAGTAACTGTAAGCCACAGACCTCCTGCACCCTCAACTGTACCCAGAAGT--- i mm10.chr12 C 0 C 0 e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I a score=6006.000000 s hg38.chr2_KI270774v1_alt 159976 1 + 223625 A s panTro5.chr2A 1446798 1 + 111504155 A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1395920 1 + 114371477 A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1420096 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1142904 1 + 81552678 A i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1472284 1 + 108979918 A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1444731 1 - 111193037 A i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1472710 1 + 3644372 A i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1427225 1 - 10304083 A i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1504727 1 - 107702431 A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 992725 1 - 2200435 A i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1424940 1 - 13651311 A i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 166980 0 + 287728 C e mm10.chr12 90026264 0 - 120129022 C e saiBol1.JH378218 1254721 0 - 7082604 C e cebCap1.NW_016107827v1 1348411 0 + 1864846 C e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1425652 210 - 108792865 I a score=121590.000000 s hg38.chr2_KI270774v1_alt 159977 15 + 223625 GCCAGACCACCCAGG----- s panTro5.chr2A 1446799 15 + 111504155 GCCAGACCACCCAGG----- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1395921 15 + 114371477 GCCAGACCACCCAGG----- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1420097 15 + 1464242 GCCAGACCACCCAGG----- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1142905 15 + 81552678 TCCAGGCCACCCAGG----- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1472285 15 + 108979918 GCCAGGTCACCCAGG----- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1444732 15 - 111193037 GCCAGGTCACCCAGG----- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1472711 15 + 3644372 GCCAGGTCACCCAGG----- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1427226 15 - 10304083 GCCAGGTCACCCAGG----- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1504728 15 - 107702431 GCCAGGTCACCCAGG----- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 992726 15 - 2200435 GCCAGGTCACCCAGG----- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1424941 15 - 13651311 GCCAGGTCACCCAGG----- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1425862 15 - 108792865 GCCAGGCCAGCCcgc----- i calJac3.chr14 I 210 C 0 s saiBol1.JH378218 1254721 15 - 7082604 GCCAGGCCACACTgc----- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1348411 15 + 1864846 GCCAGGCCACCCCAC----- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 166980 15 + 287728 GCCAGGCCACCCCGC----- i aotNan1.NW_018513311v1 C 0 I 206 s mm10.chr12 90026264 17 - 120129022 ---AGACCCTTCAATGGCTG i mm10.chr12 C 0 C 0 e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I a score=2541263.000000 s hg38.chr2_KI270774v1_alt 159992 287 + 223625 TTTCCCGGTGCGCACAGCCAAGctacgtgctttacagatttcaactcatttaataattcccagaacaacccttggaggtgggtggacc-aggGGTGCTGGTGTTTTTGTATTTCAGAGACAGTGCAGTGAATGAAGAACCGACTCTGTGTGAGGATTCTGAACTAACAAGTT--AGAGTCTATTTGAAACCTT--TCTTCATTTTATGACTTTCTTAAGTATCACATGAGAGGGTCTTGAATGGAGAGTCAAGTTGGCCTTTTATTAATTGTGTGATGGAGAAAAGCACTTA s panTro5.chr2A 1446814 287 + 111504155 TTTCCCGGTGCGCACAGCCAAGctacgtgctttacagatttcaactcatttaataattcccagaacaacccttggaggtgggtggacc-aggGGTGCTGGTGTTTTTGTATTTCAGAGACAATGCAGTGAATGAAGAACCGACTCTGTGTGAGGATTCTGAACTAACAAGTT--AGAGTCTATTTGAAACCTT--TCTTCATTTTATGACTTTCTTAAGTATCACATGAGAGGGTCTTGAATGGAGAGTCAAGTTGGCCTTTTATTAATTGTGTGATGGAGAAAAGCACTTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1395936 287 + 114371477 TTTCCCGGTGCGCACAGCCAAGctacgtgctttacagatttcaactcatttaataattcccagaacaacccttggaggtgggtggacc-aggGGTGCTGGTGTTTTTGTATTTCAGAGACAATGCAGTGAATGAAGAACCGACTCTGTGTGAGGATTCTGAACTAACAAGTT--AGAGTCTATTTGAAACCTT--TCTTCATTTTATGACTTTCTTAAGTATCACATGAGAGGGTCTTGAATGGAGAGTCAAGTTGGCCTTTTATTAATTGTGTGATGGAGAAAAGCACTTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1420112 287 + 1464242 TTTCCCGGTGCGCACAGCCAAGctacgtgctttacagatttcaactcatttaatagttcccagaacaacccttggaggtgggtggacc-aggAGTGCTGGTGTTTTTGTATTTCAGAGACAATACAGTGAATGAAGAACCGACTCTGTGTGAGGATTCTGAACTAACAAGTT--AAAGTCTATTTGAAACCTT--TCTTCATTTTATGACTTTCTTAAGTATCACATGAGAGGGTCTTGAATGGAGACTCAAGTTGGCCTTTTATTAATTGTGTGATGGAGAAAAGCACTTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1142920 285 + 81552678 TTTCCCGGTGCCCACAGCCAAGctacgtgctttacagatttcaactcatttaataattcccagaacaacccttggaggtgggtggacc-aggGGTGCTGGTGTTTTTGTATTTCCGAGACAATGCAGCGAATGAAGAACCGACTC--TGTGAGGATTCTGAACTAACAAGTT--AGAGTCTGTTTTATACCTT--TCTTCATTGTATGACTCTCTTAAGTATCACATTAGAGGGTCTTGAATGGAGACTCAAGTTGGCCTTTTATTAATTGTGTGATGGAGAAAAGCACTTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1472300 282 + 108979918 TTTCCCTGTGCCCGCAgccaggcaaggtgctttacagattacaactcatttaataattcccagaacgacccttgcaggtgagtGGACC-AGGGCTGCTGGTGTTTTTGTATTTCAGAGACAATGCAGAGAATGAAGAACTGACTCTGTGTGAGGTTTCTGAACTAGCAAGTT--AGAGTCTATTTGAAACCTT--TCTTCATTTTATGACTCTCTTAAGTATTGCATGAGAGGGTCTT-----GAGACTCAAGTTGACCTTTTATTAATTGTGTGATGGAGAAAAGCACTTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1444747 282 - 111193037 TTTCCCtgtgcccgcagccaggcaaggtgctttacagatttcaactcatttaataattcccagaacaacccttgcaggtgagtggacc-agggctgctggtgtttttgtatttcagagacaatgcagagaatgaagaactgactctctgtgaggtttctgaactagcaagtt--agagtcTATTTGAAACCTT--TCTTCATTTTATGACTCTCTTAAGTATTGCATGAGAGGGTCTT-----GAGACTCAAGTTGACCTTTTATTAATTGTGTGATGGAGAAAAGCACTTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1472726 282 + 3644372 TTTCCCTGTGCCCGCAgccaggcaaggtgctttacagatttcaactcatttaataattcccagaacaacccttgcaggtgagtggacc-agggctgctggtgtttttgtatttcagagacaatgcagagaatgaagaactgactctgtgtgaggtttctgaactagcaagtt--agagtcTGTTTGAAACCTT--TCTTCATTTTATGACTCTCTTAAGTATTGCATGAGAGGGTTTT-----GAGACTCAAGTTGACCTTTTATTAATTGTGTGATGGAGAAAAGCACTTA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1427241 282 - 10304083 TTTCCCTGTGCCCGCAgccaggcaaggtgctttgcagatttcaactcatttaataattcccagaacaacccttggaggtgagtGGACC-AGGGCTGCTGGTGTTTTTGTATTTCGGAGACAATGCAGAGAATGAAGAACTGACTCTGTGTGAGGTTTCTGAACTAGCAAGTT--AGAGTCTATTTGAAACCTT--TCTTCATTTTATGACTCTCTTAAGTATTGCATGAGAGGGTCTT-----GAGACTCAAGTTGACCTTTTATTAATTGTGTGATGGAGAAAAGCACTTA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1504743 282 - 107702431 TTTCCCtgtgcccgcagccaggcaaggtgctttacagatttcaactcatttaataattcccagaacaacccttggaggtaggtggacc-agagctgctggtgtttttgtatttcggagacaatgcagagaatgaagaactgactctgtgtgaggtttctgaactagcaagtt--agagtcTATTTGAAGCCTT--TCTGCATTTTATGACTCTCTTAAGTATTGCATGAGAGGGTCTT-----GAGACTCAAGGTGACCTTTTATTAATTGTGTGATGGAGAAAAGCGCTTA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 992741 282 - 2200435 TTTCCCTGTGCCCGCAgccaggcaaggtgctttacagatttcaactcatttaataattcccagaacaatccttggaggtgagtggacc-aggGCTGCTGGTGTTTTTGTATTTCGGAGACAATGCAGAGAATGAAGAACTGACTCCGTGTGAGGTTTCTGAACTAGCAAGTT--AGAGTCTATTTGAAACCTT--TCTTCATTTTACGACTCTCTTAAGCATTGCATGAGAGGGTCTT-----GAGACTCAAGTTGACCTTTTATTAATTGTGTGATGGAGAAAAGCACTTA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1424956 284 - 13651311 TTTCCCtgtgcccgcagccaggctaggtgctttacagatttcaactcatttaataattcccagaacaacccttggaggtgggtggact-aGGGATGCTGGTGTTTTTGTATTTCGGAGACAATGTAGAGAATGAAGAACTGACTCTGTGTGAGGTTTCCGAACTAACAAGTT--AGAGTCTATTTGAAACCTT--TCTTCATTTTATGACTCTCTTAAGTACTGCATGAGAGGGTCTTGAGTGGAGACTCAACCT---TTTTTATTAATTGTGTGATGGAGAAAAGCACTTA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1425877 265 - 108792865 tttcctggtgcccacagccagggtgcgtgctttgcggattttaactcatttaataattctcataacaacactttgaggcaggtGGAC--AGTGATGCTGGTTTTTTTGTATTTCGGAGACAGTGCAGAGAATGAAGAACAGA---------------CTGAATTAGCCACTTAGAGAGTCTATTTGAAACCTT--CCTTCATTTTATGTCTCTTTTAAGTAT-G-------AGGTCTTGAATGGAGACTCAAGCTGGCCTTTTATTAACTGTGTGGTGGAGAAAAGCACTTA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1254736 274 - 7082604 tttccgggt-cccacagccaggctgcgtgctttgcggattttaactcatttaataattctcgtaacaagcctttgaggcaggtggac--agtgatgctggtgtttctgtatttccgagacaatgcagagaatgaagaacagactc----tgaggttTCTGAATTAGCCACTT--AGAGTCTATTTGAAACCTT--CCTTCATTTTATGACTCTTTTCAGTAT-GCGT--GAGGGTCTTGAATGGAGACTCAAGTTGGCCTTTTAT----TGTGTGATGGAGAAAAGCACTTA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1348426 280 + 1864846 TTTCCCCGT-CCCACAGCCAGGctgcgtgctttgcggattttaacgcatttaataattctcataacaaccctttgaagcaggtGGAC--AGTGATGCTGGTGTTTCTGTGTTTTGGAGACAATGCAGAGAATGAAGAACAGACTC--TGTGAGGTTTCTGGATTAGCCACTT--AGAGTCTATTTGAAACCTT--CCTTCATTTTATGACTCTTTTAAGAAT-GCAT--GAGGGTCTTGAATGGAGACTCAAGTTGGCCTTTTATTAATTGTGTGATGGAGAAAAGCACTTA i cebCap1.NW_016107827v1 C 0 I 164 s aotNan1.NW_018513311v1 167201 277 + 287728 TTTCCCGGTGCCCACAgccaggctgcgtgctttgcggattttaactcatttaataattctcacgacagccctttgaggcaggtGGAC--AGTGAGGCTGGTGTGTCTGTATCTTGGAGACAATGCAGAGGATGAAGAACAGACTC----TGCGGCTTCTCAATTAGCCAGTT----AGTCTGTTTGAAACCTT--CCTTCATTTTACGACTCTTTTAAGTAT-GCAT--GACGGTCTTGAGTGGAGACTCAAGTTGGCCTTTTATTAATTGTGTGATGGAGAAAAGCACTTA i aotNan1.NW_018513311v1 I 206 C 0 s mm10.chr12 90026281 258 - 120129022 CTGCCTGGTACTTGGAACT---CACAGAGCCAAACAGGTTATAGCTC---CAATACCCTTAGTAGCAGGCCTGTGAGGTGGGTAAGTAGATGGATTCTGGCTTATTTCTGTTGTGGTAATA---------ATGAAGTTCCTAGTC--------ATTTCTG-----TCACGTT--AAAGAACAGTTGATTTTTCGATCTTTATTTTATGATTCTTTTTAA----AAACCAAAGGATCTTAAATGGAGATCCCTGTTGGTCATTGATCAGTTGTGCAAGAGAAAAATCATATTA i mm10.chr12 C 0 C 0 e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I a score=1063079.000000 s hg38.chr2_KI270774v1_alt 160279 165 + 223625 TGCACCTG----GAAATGCGGTCCCTGACTCTAGGGGTCTCAC-AGGTTGTTAGGAAGAAGGATGGGCTGTTTGATA-TGCGAGTCACCGTGT--GTGTC-TGTTGCACCAGGCCCTGTGGCGG--CCTGGGC--ATCGTGTCTGCAGTCCTAGCCGGGAGCCTGCAGGGAGGTGCGC s panTro5.chr2A 1447101 167 + 111504155 TGCACCTA----GAAATGCGGTCCCTGACTGTAGGGGTCTCACGGGGTTGTTAGGAAGAAGGACGGGCTGTTTGATACTGCGACTCACTGTGT--GTGTC-TGTTGCACCAGGCCCTGTGGCGG--CCTGGGC--ATCGTGTCTGCAATCCTCGCTGGGAGCCTGCAGGGAAGTGCGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1396223 167 + 114371477 TGCACCTA----GAAATGCGGTCCCTGACTGTAGGGGTCTCACGGGGTTGTTAGGAAGAAGGACGGGCTGTTTGATACTGCGAGTCACCGTGT--GTGTC-TGTTGCACCAGGCCCTGTGGCGG--CCTGGGC--ATCGTGTCTGCAATCCTCGCTGGGAGCCTGCAGGGAAGTGCGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1420399 167 + 1464242 TGCACCTA----GAAATGCGGTCCCTGACTCTAGGGGTCTCACGGAGTTGTTAGGAAGAAGGATGGGCTGTTTTATACTGAGAGTCACCGTGT--GTGTC-TGTTGCACCAGGCCCTGTGGTGG--CCTGGGC--ATCGTGTCTGCAGTCCTAGCCGGGAGCCTGCAGGGAAGTGCGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1143205 169 + 81552678 CGCACCTA----GAAATGTGGTCCCTGACTCTAGGGGTCTCACGGGGTGGTTATGAAGAAGGATGGGCTGTTTTATACTGAGAGTCACCATGT--GTGTC-TGTTGCACCAGGCCCTGTGGCAG--CCTGGGCATATCCTGTCTGCAGTCCTCGCCGGGAGCCTGCGGGGAAGGGCGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1472582 169 + 108979918 CACACCTA----GAAGTGCAGTCCCTGACTCTGGGGGTCTCACGGGGTTGTTATGAAGAAGGATGGGCTGTTTTACATTGAGAGTCACCATGTGCGCGTC-TGTTGCACCGGGCCCTGTAGCGG--CCTGGGC--ATCGTCTCTGCAGTTCTTGCCCTGAGCCTGCGGGGAAGGGCGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1445029 169 - 111193037 CACACCTA----TAAGTGCAGTCCCTGACTCTGGGGGTCTCACGGGGTTGTTATGAAGAAGGATGGGCTGTTTTACATTGAGAGTCACCATGTGCGCGTC-TGTTGCACCGGGCCCTGTAGCGG--CCTGGGC--ATCGTCTCTGCAGTTCTTGCCCTGAGCCTGCGGGGAAGGGCGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1473008 169 + 3644372 CACACCTA----GAAGTGCAGTCCCTGACTCTGGGGGTCTCACGGGGTTGTTATGAAGAAGGATGGGCTGTTTTACATTGAGAGTCACCATGTGCGCGTC-TGTTGCACCGGGCCCTGTAGCGG--CCTGGGC--ATCGTCTCTGCAGTTCTTGCCCTGAGCCTGCGGGGAAGGGCGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1427523 169 - 10304083 CACACCTA----GAAGTGCAGTCCCTGACTCTGGGGGTCTCACAGGATTGTTATGAAGAAGGATGGGCTGTTTTATATTGAGAGTTACCATGTGCGCGTC-TGTTGCACCGGGCCCTGTAGCGG--CCTGGGC--ATCCTCTCTGCAGTTCTTGCCCTGAGCCTGCGGGGAAGGGCGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1505025 169 - 107702431 CACACCTA----GGAGTGCAGTCCCTGACTCTGGGGGTCTCACAGGGTTGTTGTGAAGAGGGATAGGCTGTTTTATATTGAGAGTTAGCATGTGCGTGTC-TGTTGCACCGGGCCCTGTAGCGG--CCTAGGC--GTCGTCTCTGCAGTTCTTGCCCTGAGCCTGCGGGGAAGGGCGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 993023 169 - 2200435 CACACCTA----GAAGTGCAGTCCCTGACTCTGGGGGTCTCACAGGATTGTTATGAAGAAGGATGGGCTGTTTTATATTGACAGTTACCATGTGCGCGTC-TGTTGCACCGGGCCCTGTAGCGG--CCTGGGC--GTCGTCTCTGCAGTTCTTGCCCTGAGCCTGCGGGGAAGGGCGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1425240 150 - 13651311 CACACCTA----GAAATGCAGTCCCTGACTCTGGGGGTCTCACGGGGTTGTTATGAAGAAGGATGGGCTGTTTTATACTGAGAGTCACCATGTGTGTGTC-TGTTGCACCGGGCCCTG-----------------------TCCGCAGTTCTCGCCCTGAGCCTGCGGGGAAGGGCGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1426142 161 - 108792865 CATGCCTGT---GAAGCGCAGCCCCTGACTCTGCAGGCCGA---GGGCAGTTAGGAAGAATGATGGGTTGTTT-ATATT--GAGTCACCCGGG--GTGTC-TGTTGCCACAGGCCCTGTATTGG--TCTCGGC--ATGGTCTGTGCTGTCCTCACTGGGAGCCTGCCGGGAAGGGCA- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1255010 164 - 7082604 CTTGCCTGT---GAAACGCAGCCCCGGGCTCTGCAGGCCTAT--GGGGGGTTAGGAAGAATGATGGGTTGTTT-ATACTGAGAGTCGTCCAGG--GTGTC-TGTTGCCACAGGCCCTGTAGCGG--TCTCGGC--ATGGTCTGTGCCATCCTCACTGGGAGCCTTCGGGAAAGGACA- i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 167478 161 + 287728 CATGCCTGT---GAAACGCAGCCCCTGA--CTGCAGGCCTCC--GGGTGGTTAGGAAGAATGATGGGTTCTTT-ATATTGAGAGTCACCCAGG--GTGTC-TGCTGCCACAGGCTCTGTAGCGG--TCTCGGC--ATGGTCTGTGCCGTCCTCACTGGGAGCCTTC-GGGAAGGGCA- i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90026539 158 - 120129022 --------AAAATCAATGCAG-CGCTGA-TGTCACCATCTCCCTGGGTTGTGATGGAGGAC--TGAGTCACTTTATACTAACCCCTTCCC-----ATGTCAGGTTAGAAcaggctctgtgctgggcacttgac--atcatgcctgt-gtcctcacagagaccctgtggagaagataGC i mm10.chr12 C 0 C 0 e cebCap1.NW_016107827v1 1348706 164 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I a score=97394.000000 s hg38.chr2_KI270774v1_alt 160444 10 + 223625 GTCAGT-CCTG s panTro5.chr2A 1447268 10 + 111504155 GTCAGT-CCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1396390 10 + 114371477 GTCAGT-CCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1420566 11 + 1464242 GTCAGTCCCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1143374 10 + 81552678 GTCAAT-CCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1472751 10 + 108979918 GTCAAT-CCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1445198 10 - 111193037 GTCAAT-CCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1473177 10 + 3644372 GTCAAT-CCTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1427692 10 - 10304083 GTCAAT-CCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1505194 10 - 107702431 GTCAAT-CCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 993192 10 - 2200435 GTCAAT-CCTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1425390 10 - 13651311 GTCAAT-CCTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1426303 10 - 108792865 GTCAAT-CCTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1255174 10 - 7082604 GTCAAT-CCTC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1348870 10 + 1864846 GTCAAT-CCTC i cebCap1.NW_016107827v1 I 164 C 0 s aotNan1.NW_018513311v1 167639 10 + 287728 GTCAAT-CCTC i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90026697 10 - 120129022 TTTAAT-CTTG i mm10.chr12 C 0 I 1720 e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I a score=490375.000000 s hg38.chr2_KI270774v1_alt 160454 50 + 223625 TTCTAAAGGAGGCACTGGAGCCTTGTCCGAGGAGGCACAGGGGCTGTGTG s panTro5.chr2A 1447278 50 + 111504155 TTCTAAAGGAGGCACTGGAGTCTTGTCCGAGGAGGCACAGGGGCTGTGTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1396400 50 + 114371477 TTCTAAAGGAGGCACTGGAGTCTTGTCCGAGGAGGCACAGGGGCTGTGTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1420577 50 + 1464242 TTCTAAAGGAGGCACTGGAGCCTTGTCCGAGGAGGCACAGGGGCTGTGTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1143384 50 + 81552678 TTCTAAAGGAGGCACTGGAGCCCTGTCCGAGGAGGCACAGGGGCTGTGTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1472761 50 + 108979918 TTCTAAAGGAGGCACTGGAGCTTTGTCCAAGGAGGCACAGGGGCTGTGCG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1445208 50 - 111193037 TTCTAAAGGAGGCACTGGAGCTTTGTCCAAGGAGGCACAGGGGCTGTGCG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1473187 50 + 3644372 TTCTAAAGGAGGCACTGGAGCTTTGTCCAAGGAGGCACAGGGGCTGTGCG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1427702 50 - 10304083 TTCTAAAGGACGCACTGGAGCTTTGTCCAAGGAGGCACAGGGGCTGTGCG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1505204 50 - 107702431 TTCTAAAGGAGGCACTGGAGCTTTGTCCAAGGAGGCACAGGGGCTGTGCG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 993202 50 - 2200435 TTCTAAAGGAGGCACTGGAGCTTTGTCCAAGGAGGCGCAGGGGCTGTGCG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1425400 50 - 13651311 TTCTAAAGGAGGCACTAGAGCTCTGTCCAAGGAGGCAAAGGGGCTGTGCG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1426313 50 - 108792865 TTCTAGAGGAGGAGCTGGAGCCTTGTCCAAGGAGGCCCGGGGGCTGTGTA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1255184 48 - 7082604 TTCTAAAGGAGGAGCTGGAGCCTTGTCCAAGGAGGCACGGGGGCTGTG-- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1348880 49 + 1864846 TTCTAAAGGAGGAGCGGGAGCCTTGTCCAAGGAGGCAC-GGGGCTGTGTG i cebCap1.NW_016107827v1 C 0 I 68 s aotNan1.NW_018513311v1 167649 50 + 287728 TTCTAAAGGAGGAGCTGGAGCCTTGTCCAAGGAGGCACGGGGGCTGTGTG i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90026707 1720 - 120129022 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I a score=99500.000000 s hg38.chr2_KI270774v1_alt 160504 16 + 223625 TGGCACCGGCTGCCCC s panTro5.chr2A 1447328 16 + 111504155 TGGCACCGGCTGCCCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1396450 16 + 114371477 TGGCACCGGCTGCCCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1420627 16 + 1464242 TGGCACCGGCTGCCCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1143434 16 + 81552678 TGGCACCGGCTGCTCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1472811 16 + 108979918 TGGCACCGACCACCCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1445258 16 - 111193037 TGGCACCGACCACCCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1473237 16 + 3644372 TGGCACCGACCACCCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1427752 16 - 10304083 TGGCACCGACCGCCCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1505254 16 - 107702431 TGGCACCGACCGCCCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 993252 16 - 2200435 TGGCACCGACCGCCCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1425450 16 - 13651311 TGGCACCGACCGCCCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1426363 12 - 108792865 TGGCCGGAGCTA---- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1255232 12 - 7082604 TGGCCCCAGCTA---- i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 167699 16 + 287728 TGGCCCCAGCTACCCC i aotNan1.NW_018513311v1 C 0 I 78 e mm10.chr12 90026707 1720 - 120129022 I e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I a score=221979.000000 s hg38.chr2_KI270774v1_alt 160520 37 + 223625 CGGGCACCATGCGCCCCTGCCGCTTTCTGGCCTTCAC s panTro5.chr2A 1447344 37 + 111504155 CGGGCACCATGCGCCCCTGCCGCTTTCTGGCCTTCAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1396466 37 + 114371477 CGGGCACCATGCGCCCCTGCCGCTTTCTGGCCTTCAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1420643 37 + 1464242 CGGGCACCATGCGCCCCTGCCGCTTTCTGGCCTTCAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1143450 37 + 81552678 CGGGCACCATGCGCCCCTGCCGCTTTCTGGCCTTCAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1472827 37 + 108979918 CAGGCAGCACACACCCCTGCCACTTTCTGGCCTTTGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1445274 37 - 111193037 CAGGCAGCACACACCCCTGCCACTTTCTGGCCTTTGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1473253 37 + 3644372 CAGGCAGCACACACCCCTGCCACTTTCTGGCCTTTGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1427768 37 - 10304083 CAGGCAGCACACACCCCTGCCACTTTCTGGCCTTTGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1505270 37 - 107702431 CAGGCAGCACACACCCCTGCCACTTTCTGGCCTTCGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 993268 37 - 2200435 CAGGCAGCACACACCCCTGCCACCTTCTGGCCTTTGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1425466 37 - 13651311 CAGGCAGCACACACCCCTGCCACTTTCTGGCCTTCGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1426375 23 - 108792865 --------------CCCTGCTGCGCTCTGAACTTCAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1255244 23 - 7082604 --------------CCCTGCTGCGCTCTGGCCTTCGC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I a score=853158.000000 s hg38.chr2_KI270774v1_alt 160557 145 + 223625 TGCACTGGGGTCCAGGCCCCAAAGGTCAGAGCAGAGGGTCTGGGAAGCCTCCATGCGCTGGGTGTTAACCCTTAGTTCCTGGGTGGCGAGGGGACCTGGAGCTTCCTGGAACAGGGGCTGGCAGCAGCAGGCCCTCACACTTCTC s panTro5.chr2A 1447381 145 + 111504155 TGCACTGGGGTCCAGGCCCCAaaggtcagagcagagggcctgggaagcccccatgtgctgggcgttaacccttagttcctgggtggcgaggggacctggagcttcctggaacaggggctggCAGCAGCAGGCCCGCACACTTCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1396503 145 + 114371477 TGCACTGGGGTCCAGGCCCCAaaggtcagagcagagggcctgggaagcccccatgtgctgggcgttaacccttagttcctgggtggcgaggggacctggagcttcctggaacaggggctggCAGCAGCAGGCCCGCGCACTTCTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1420680 145 + 1464242 TGCACTGGGGTCCAGGCCCCAaaggtcagagcagagggcctgggaagcccccatacgctgggcgttaacccttagttcctgggtggcgaggggacctggagcttcctggaacaggggctggCAGCAGCAGGCCCGCACACTTCTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1143487 144 + 81552678 TGCACTGGGGTCCAGGCCCCAAAGGTCAGAGCGGAGGGCCTGGGAAGCCCCCATGCGCT-GGCGTTAACCCTTAGTTCCTGGGTGGCGAGGGGACCTGGAGCTTCCTGGAACAGGGGCTGGCAGCAGCAGGCCCTCAGGCTTCTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1472864 145 + 108979918 TGCCCTGGGGTCCAGGCCCCAAAGGTCAGAGCAGAGGGCCTGGGAAGCCCCCATGCGCTGGGCGTTAACTCTTAGTTCCTGGGTGATGAGGGAACCTGGAGCTTCCTGGAACAGGGGCTGGCAGCAGCAGGCCCGCAGGCTTCTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1445311 145 - 111193037 TGCCCTGGGGTCCAGGCCCCAAAGGTCAGAGCAGAGGGCCTGGGAAGCCCCCATGCGCTGGGCGTTAACTCTTAGTTCCTGGGTGATGAGGGAACCTGGAGCTTCCTGGAACAGGGGCTGGCAGCAGCAGGCCCGCAGGCTTCTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1473290 145 + 3644372 TGCCCTGGGGTCCAGGCCCCAAAGGTCAGAGCAGAGGGCCTGGGAAGCCCCTATGCGCTGGGCGTTAACTCTTAGTTCCTGGGTGATGAGGGAACCTGGAGCTTCCTGGAACAGGGGCTGGCAGCAGCAGGCCCGCAGGCTTCTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1427805 145 - 10304083 TGCACTGGGGTCCAGGCCCCAAAGGTCAGAGCAGAGGGCCTGGGAAGCCCCCATGCGCTGGGTGTTAATCCTTAGTTCCTGGGTGATGACGGGACCTGGAGCTTCCTGGAACAGGGGCTGGCAGCAGCAGGCCCGCAGGCTTCTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1505307 145 - 107702431 TGCACTGGGGTCCAGGTCCCAAAGGTCAGAGCAGAGGGCCTGGGAAGCCCCCATGCTCTGGGTGTTAACCCTCAGTTCCTGGGTGATGAGGAGACCTGGAGCTTCCTGGAACAGGGGCTGGCAGCAGCAGGCCCGCAGGCTTCTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 993305 145 - 2200435 TGCACTGGGGTCCAGGCCCCAaaggtcagagcagagggcctgggaagcccccatgcgctgggtgttaacccttagttcctgggtgatgaggggacctggagcttcctggaacaggggctggCAGCAGCAGGCCCGCAGGCTTCTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1425503 145 - 13651311 TGCACTGGGGTCCAGGTCCCAAAGGTCAGAGCAGAGGGCCTGGGAAGCCCCCATGTGCTGGGCGTTAACTCTTAGTTCCTGGGTGGTGAGGGGACTTGGAGCTTCCTGGAACAGGGGCTGGCAGCAGCAGGCCTGCAGGCTTCTC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C a score=34116.000000 s hg38.chr2_KI270774v1_alt 160702 13 + 223625 CGGCAAGCACGGC s panTro5.chr2A 1447526 13 + 111504155 CGGCAAGCACGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1396648 13 + 114371477 CGGCAAGCACGGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1420825 11 + 1464242 CGGCAAGCACG-- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1143631 13 + 81552678 CAGCAAGCACGGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1473009 13 + 108979918 CAGCAAACACGGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1445456 13 - 111193037 CAGCAAACACGGC i macFas5.chr13 C 0 T 13 s macNem1.NW_012011978v1 1473435 13 + 3644372 CAGCAAACACGGC i macNem1.NW_012011978v1 C 0 C 0 s colAng1.NW_012118821v1 1425648 13 - 13651311 CAGCAAACATGGC i colAng1.NW_012118821v1 C 0 T 13 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 993450 0 - 2200435 C e chlSab2.chr14 1505452 0 - 107702431 C e cerAty1.NW_012000820v1 1427950 0 - 10304083 C a score=28876.000000 s hg38.chr2_KI270774v1_alt 160715 26 + 223625 AGACGGGCTCACTGTCCTAACACGCA-- s panTro5.chr2A 1447539 26 + 111504155 AGACGAGCTCACTGTCCTAACGCACA-- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1396661 26 + 114371477 AGACGAGCTCACTGTCCTAACGCACA-- i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1143644 26 + 81552678 AGACGAGCTCACTGTCCTAACGCACA-- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1473022 28 + 108979918 AGACGAGCTTACTGTCCTAACGTGCGCA i rheMac8.chr13 C 0 C 0 s macNem1.NW_012011978v1 1473448 28 + 3644372 AGACGAGCTCACTGTCCTAACGTGCGCA i macNem1.NW_012011978v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e colAng1.NW_012118821v1 1425661 13 - 13651311 T e manLeu1.NW_012103754v1 993450 0 - 2200435 C e chlSab2.chr14 1505452 0 - 107702431 C e cerAty1.NW_012000820v1 1427950 0 - 10304083 C e macFas5.chr13 1445469 13 - 111193037 T e gorGor5.CYUI01015607v1 1420836 0 + 1464242 C a score=4446.000000 s hg38.chr2_KI270774v1_alt 160741 6 + 223625 TCCACA s panTro5.chr2A 1447565 6 + 111504155 TCCACA i panTro5.chr2A C 0 C 0 s nomLeu3.chr19 1143670 6 + 81552678 TCCACA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1473050 6 + 108979918 TCCTCA i rheMac8.chr13 C 0 C 0 s macNem1.NW_012011978v1 1473476 6 + 3644372 TCCTCA i macNem1.NW_012011978v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e colAng1.NW_012118821v1 1425661 13 - 13651311 T e manLeu1.NW_012103754v1 993450 0 - 2200435 C e chlSab2.chr14 1505452 0 - 107702431 C e cerAty1.NW_012000820v1 1427950 0 - 10304083 C e macFas5.chr13 1445469 13 - 111193037 T e gorGor5.CYUI01015607v1 1420836 0 + 1464242 C e panPan2.chr2A 1396687 0 + 114371477 C a score=5865.000000 s hg38.chr2_KI270774v1_alt 160747 4 + 223625 CAGC s panTro5.chr2A 1447571 4 + 111504155 CAGC i panTro5.chr2A C 0 C 0 s nomLeu3.chr19 1143676 4 + 81552678 CAGC i nomLeu3.chr19 C 0 T 45 s rheMac8.chr13 1473056 4 + 108979918 CAGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1445456 4 - 111193037 CAGC i macFas5.chr13 T 13 C 0 s macNem1.NW_012011978v1 1473482 4 + 3644372 CAGC i macNem1.NW_012011978v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e colAng1.NW_012118821v1 1425661 13 - 13651311 T e manLeu1.NW_012103754v1 993450 0 - 2200435 C e chlSab2.chr14 1505452 0 - 107702431 C e cerAty1.NW_012000820v1 1427950 0 - 10304083 C e gorGor5.CYUI01015607v1 1420836 0 + 1464242 C e panPan2.chr2A 1396687 0 + 114371477 C a score=27317.000000 s hg38.chr2_KI270774v1_alt 160751 17 + 223625 AAACACAGCAGACGAGC s panTro5.chr2A 1447575 17 + 111504155 AAACACGGCAGACGAGC i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1420836 10 + 1464242 -------GCAGACGAGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1143635 17 + 81552678 AAGCACGGCAGACGAGC i nomLeu3.chr19 T 45 C 0 s rheMac8.chr13 1473060 17 + 108979918 AAACACAGCAGACGAGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1445460 17 - 111193037 AAACACGGCAGACGAGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1473486 17 + 3644372 AAACACAGCAGACGAGC i macNem1.NW_012011978v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e colAng1.NW_012118821v1 1425661 13 - 13651311 T e manLeu1.NW_012103754v1 993450 0 - 2200435 C e chlSab2.chr14 1505452 0 - 107702431 C e cerAty1.NW_012000820v1 1427950 0 - 10304083 C e panPan2.chr2A 1396687 0 + 114371477 C a score=19736.000000 s hg38.chr2_KI270774v1_alt 160768 24 + 223625 TCACTGTCCTAAC--GCACATCCACA s panTro5.chr2A 1447592 24 + 111504155 TCACTGTCCTAAC--GCACATCCACA i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1420846 24 + 1464242 TCACTGTCCTAAC--GCACATCCACA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1143652 24 + 81552678 TCACTGTCCTAAC--GCACATCCACA i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1445477 26 - 111193037 TCACTGTCCTAACGTGCGCATCCTCA i macFas5.chr13 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e colAng1.NW_012118821v1 1425661 13 - 13651311 T e manLeu1.NW_012103754v1 993450 0 - 2200435 C e chlSab2.chr14 1505452 0 - 107702431 C e cerAty1.NW_012000820v1 1427950 0 - 10304083 C e macNem1.NW_012011978v1 1473503 0 + 3644372 C e rheMac8.chr13 1473077 0 + 108979918 C e panPan2.chr2A 1396687 0 + 114371477 C a score=7230.000000 s hg38.chr2_KI270774v1_alt 160792 5 + 223625 CAGCA s panTro5.chr2A 1447616 5 + 111504155 CAGCA i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1420870 5 + 1464242 CAGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1143676 5 + 81552678 CAGCA i nomLeu3.chr19 C 0 T 45 s macFas5.chr13 1445503 5 - 111193037 CAGCA i macFas5.chr13 C 0 C 0 s colAng1.NW_012118821v1 1425648 5 - 13651311 CAGCA i colAng1.NW_012118821v1 T 13 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 993450 0 - 2200435 C e chlSab2.chr14 1505452 0 - 107702431 C e cerAty1.NW_012000820v1 1427950 0 - 10304083 C e macNem1.NW_012011978v1 1473503 0 + 3644372 C e rheMac8.chr13 1473077 0 + 108979918 C e panPan2.chr2A 1396687 0 + 114371477 C a score=10330.000000 s hg38.chr2_KI270774v1_alt 160797 8 + 223625 AACACGGC s panTro5.chr2A 1447621 8 + 111504155 AACACGGC i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1420875 8 + 1464242 AACACGGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1143636 8 + 81552678 AGCACGGC i nomLeu3.chr19 T 45 C 0 s macFas5.chr13 1445508 8 - 111193037 AACACGGC i macFas5.chr13 C 0 C 0 s colAng1.NW_012118821v1 1425653 8 - 13651311 AACATGGC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 993450 0 - 2200435 C e chlSab2.chr14 1505452 0 - 107702431 C e cerAty1.NW_012000820v1 1427950 0 - 10304083 C e macNem1.NW_012011978v1 1473503 0 + 3644372 C e rheMac8.chr13 1473077 0 + 108979918 C e panPan2.chr2A 1396687 0 + 114371477 C a score=26337.000000 s hg38.chr2_KI270774v1_alt 160805 26 + 223625 AGACGAGTTCACTGTCCTAACGCACA s panTro5.chr2A 110046621 25 - 111504155 AGATGAGCTCACT-TCCTAACGCACA i panTro5.chr2A T 80344 I 43 s gorGor5.CYUI01015607v1 1420883 26 + 1464242 AGATGAGCTCACTGTCCTAACGCATA i gorGor5.CYUI01015607v1 C 0 T 77 s nomLeu3.chr19 1143644 24 + 81552678 AGACGAGCTCACTGTCCTAACGCA-- i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1445516 26 - 111193037 AGACGAGCTCACTGTCCTAACGCGCG i macFas5.chr13 C 0 C 0 s colAng1.NW_012118821v1 1425661 26 - 13651311 AGACGAGCTCACTGTCCTAATGCCCG i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 993450 0 - 2200435 C e chlSab2.chr14 1505452 0 - 107702431 C e cerAty1.NW_012000820v1 1427950 0 - 10304083 C e macNem1.NW_012011978v1 1473503 0 + 3644372 C e rheMac8.chr13 1473077 0 + 108979918 C e panPan2.chr2A 1396687 0 + 114371477 C a score=7640.000000 s hg38.chr2_KI270774v1_alt 160831 8 + 223625 CATCCACA s panTro5.chr2A 110046689 8 - 111504155 CATCCACA i panTro5.chr2A I 43 C 0 s nomLeu3.chr19 1143668 8 + 81552678 CATCCACA i nomLeu3.chr19 C 0 T 45 s macFas5.chr13 1445542 8 - 111193037 CATCCACA i macFas5.chr13 C 0 C 0 s colAng1.NW_012118821v1 1425687 8 - 13651311 CATCCACA i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 993450 0 - 2200435 C e chlSab2.chr14 1505452 0 - 107702431 C e cerAty1.NW_012000820v1 1427950 0 - 10304083 C e macNem1.NW_012011978v1 1473503 0 + 3644372 C e rheMac8.chr13 1473077 0 + 108979918 C e gorGor5.CYUI01015607v1 1420909 77 + 1464242 T e panPan2.chr2A 1396687 0 + 114371477 C a score=2910.000000 s hg38.chr2_KI270774v1_alt 160839 3 + 223625 CAG s panTro5.chr2A 110046697 3 - 111504155 CAG i panTro5.chr2A C 0 I 1 s nomLeu3.chr19 1143631 3 + 81552678 CAG i nomLeu3.chr19 T 45 I 1 s macFas5.chr13 1445550 3 - 111193037 CAG i macFas5.chr13 C 0 T 47 s colAng1.NW_012118821v1 1425695 3 - 13651311 CAG i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 993450 0 - 2200435 C e chlSab2.chr14 1505452 0 - 107702431 C e cerAty1.NW_012000820v1 1427950 0 - 10304083 C e macNem1.NW_012011978v1 1473503 0 + 3644372 C e rheMac8.chr13 1473077 0 + 108979918 C e gorGor5.CYUI01015607v1 1420909 77 + 1464242 T e panPan2.chr2A 1396687 0 + 114371477 C a score=-815.000000 s hg38.chr2_KI270774v1_alt 160842 4 + 223625 -GAAA s panTro5.chr2A 110046701 4 - 111504155 -AAAA i panTro5.chr2A I 1 C 0 s nomLeu3.chr19 1143635 3 + 81552678 -AAG- i nomLeu3.chr19 I 1 C 0 s macFas5.chr13 1445506 4 - 111193037 CAAA- i macFas5.chr13 T 47 C 0 s colAng1.NW_012118821v1 1425698 4 - 13651311 CAAA- i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 993450 0 - 2200435 C e chlSab2.chr14 1505452 0 - 107702431 C e cerAty1.NW_012000820v1 1427950 0 - 10304083 C e macNem1.NW_012011978v1 1473503 0 + 3644372 C e rheMac8.chr13 1473077 0 + 108979918 C e gorGor5.CYUI01015607v1 1420909 77 + 1464242 T e panPan2.chr2A 1396687 0 + 114371477 C a score=38084.000000 s hg38.chr2_KI270774v1_alt 160846 32 + 223625 CACGGCAGACGGGCTCACTGTCCTAACACGCA-- s panTro5.chr2A 110046705 32 - 111504155 CACGGCAGACGAGCTCACTGTCCTAACGCACG-- i panTro5.chr2A C 0 T 91 s gorGor5.CYUI01015607v1 1420832 32 + 1464242 CACGGCAGACGAGCTCACTGTCCTAACGCACA-- i gorGor5.CYUI01015607v1 T 77 C 0 s nomLeu3.chr19 1143638 32 + 81552678 CACGGCAGACGAGCTCACTGTCCTAACGCACA-- i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1445510 34 - 111193037 CACGGCAGACGAGCTCACTGTCCTAACGCGCGCA i macFas5.chr13 C 0 C 0 s colAng1.NW_012118821v1 1425702 34 - 13651311 CGCGGCAGACGAGCTCACTGTCCTAACGTGCGCA i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 993450 0 - 2200435 C e chlSab2.chr14 1505452 0 - 107702431 C e cerAty1.NW_012000820v1 1427950 0 - 10304083 C e macNem1.NW_012011978v1 1473503 0 + 3644372 C e rheMac8.chr13 1473077 0 + 108979918 C e panPan2.chr2A 1396687 0 + 114371477 C a score=8595.000000 s hg38.chr2_KI270774v1_alt 160878 6 + 223625 TCCACA s panTro5.chr2A 110046646 6 - 111504155 TCCACA i panTro5.chr2A T 91 C 0 s gorGor5.CYUI01015607v1 1420864 6 + 1464242 TCCACA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1143670 6 + 81552678 TCCACA i nomLeu3.chr19 C 0 T 45 s macFas5.chr13 1445544 6 - 111193037 TCCACA i macFas5.chr13 C 0 C 0 s colAng1.NW_012118821v1 1425736 6 - 13651311 TCCACA i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 993450 0 - 2200435 C e chlSab2.chr14 1505452 0 - 107702431 C e cerAty1.NW_012000820v1 1427950 0 - 10304083 C e macNem1.NW_012011978v1 1473503 0 + 3644372 C e rheMac8.chr13 1473077 0 + 108979918 C e panPan2.chr2A 1396687 0 + 114371477 C a score=7230.000000 s hg38.chr2_KI270774v1_alt 160884 5 + 223625 CAGCA s panTro5.chr2A 110046652 5 - 111504155 CAGCA i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1420870 5 + 1464242 CAGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1143631 5 + 81552678 CAGCA i nomLeu3.chr19 T 45 C 0 s macFas5.chr13 1445550 5 - 111193037 CAGCA i macFas5.chr13 C 0 T 86 s colAng1.NW_012118821v1 1425742 5 - 13651311 CAGCA i colAng1.NW_012118821v1 C 0 T 86 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 993450 0 - 2200435 C e chlSab2.chr14 1505452 0 - 107702431 C e cerAty1.NW_012000820v1 1427950 0 - 10304083 C e macNem1.NW_012011978v1 1473503 0 + 3644372 C e rheMac8.chr13 1473077 0 + 108979918 C e panPan2.chr2A 1396687 0 + 114371477 C a score=3237.000000 s hg38.chr2_KI270774v1_alt 160889 8 + 223625 AACACAGA s panTro5.chr2A 110046657 8 - 111504155 AACACGGC i panTro5.chr2A C 0 I 2550 s gorGor5.CYUI01015607v1 1420875 8 + 1464242 AACACGGC i gorGor5.CYUI01015607v1 C 0 T 45 s nomLeu3.chr19 1143636 8 + 81552678 AGCACGGC i nomLeu3.chr19 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e colAng1.NW_012118821v1 1425747 86 - 13651311 T e manLeu1.NW_012103754v1 993450 0 - 2200435 C e chlSab2.chr14 1505452 0 - 107702431 C e cerAty1.NW_012000820v1 1427950 0 - 10304083 C e macNem1.NW_012011978v1 1473503 0 + 3644372 C e macFas5.chr13 1445555 86 - 111193037 T e rheMac8.chr13 1473077 0 + 108979918 C e panPan2.chr2A 1396687 0 + 114371477 C a score=28201.000000 s hg38.chr2_KI270774v1_alt 160897 24 + 223625 AGACGAGCTCACTGTCCTAACGCA-- s panTro5.chr2A 1447629 24 + 111504155 AGACGAGCTCACTGTCCTAACGCA-- i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1420838 24 + 1464242 AGACGAGCTCACTGTCCTAACGCA-- i gorGor5.CYUI01015607v1 T 45 I 55 s nomLeu3.chr19 1143644 24 + 81552678 AGACGAGCTCACTGTCCTAACGCA-- i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1445469 26 - 111193037 AGACGAGCTCACTGTCCTAACGTGCG i macFas5.chr13 T 86 C 0 s colAng1.NW_012118821v1 1425661 26 - 13651311 AGACGAGCTCACTGTCCTAATGCCCG i colAng1.NW_012118821v1 T 86 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 993450 0 - 2200435 C e chlSab2.chr14 1505452 0 - 107702431 C e cerAty1.NW_012000820v1 1427950 0 - 10304083 C e macNem1.NW_012011978v1 1473503 0 + 3644372 C e rheMac8.chr13 1473077 0 + 108979918 C e panPan2.chr2A 1396687 0 + 114371477 C a score=7940.000000 s hg38.chr2_KI270774v1_alt 160921 8 + 223625 CATC---CACA s panTro5.chr2A 1447653 8 + 111504155 CATC---CACA i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1420917 11 + 1464242 CATCCCACACA i gorGor5.CYUI01015607v1 I 55 C 0 s nomLeu3.chr19 1143668 8 + 81552678 CATC---CACA i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1445495 8 - 111193037 CATC---CTCA i macFas5.chr13 C 0 C 0 s colAng1.NW_012118821v1 1425687 8 - 13651311 CATC---CACA i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 993450 0 - 2200435 C e chlSab2.chr14 1505452 0 - 107702431 C e cerAty1.NW_012000820v1 1427950 0 - 10304083 C e macNem1.NW_012011978v1 1473503 0 + 3644372 C e rheMac8.chr13 1473077 0 + 108979918 C e panPan2.chr2A 1396687 0 + 114371477 C a score=17352.000000 s hg38.chr2_KI270774v1_alt 160929 5 + 223625 CAGCA s panTro5.chr2A 1447661 5 + 111504155 CAGCA i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1420928 5 + 1464242 CAGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1143676 5 + 81552678 CAGCA i nomLeu3.chr19 C 0 T 45 s macFas5.chr13 1445503 5 - 111193037 CAGCA i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1427950 5 - 10304083 CAGCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1505452 5 - 107702431 CAGCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 993450 5 - 2200435 CAGCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1425695 5 - 13651311 CAGCA i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e macNem1.NW_012011978v1 1473503 0 + 3644372 C e rheMac8.chr13 1473077 0 + 108979918 C e panPan2.chr2A 1396687 0 + 114371477 C a score=51608.000000 s hg38.chr2_KI270774v1_alt 160934 16 + 223625 AACACGGCAGACGAGT s panTro5.chr2A 1447666 16 + 111504155 AACACGGCAGACGAGC i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1420933 16 + 1464242 AACACGGCAGATGAGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1143636 16 + 81552678 AGCACGGCAGACGAGC i nomLeu3.chr19 T 45 C 0 s macFas5.chr13 1445508 16 - 111193037 AACACGGCAGACGAGC i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1427955 16 - 10304083 AACACGGCAGACGAGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1505457 16 - 107702431 AACACGGCAGACGAGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 993455 16 - 2200435 AACACGGCAGACGAGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1425700 16 - 13651311 AACGCGGCAGACGAGC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e macNem1.NW_012011978v1 1473503 0 + 3644372 C e rheMac8.chr13 1473077 0 + 108979918 C e panPan2.chr2A 1396687 0 + 114371477 C a score=64617.000000 s hg38.chr2_KI270774v1_alt 160950 13 + 223625 TCACTGTCCTAAC s panTro5.chr2A 1447682 13 + 111504155 TCACTGTCCTAAC i panTro5.chr2A C 0 I 1 s gorGor5.CYUI01015607v1 1420949 13 + 1464242 TCACTGTCCTAAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1143652 13 + 81552678 TCACTGTCCTAAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1473077 13 + 108979918 TCACTGTCCTAAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1445524 13 - 111193037 TCACTGTCCTAAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1473503 13 + 3644372 TCACTGTCCTAAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1427971 13 - 10304083 TCACTGTCCTAAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1505473 13 - 107702431 TCACTGTCCTAAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 993471 13 - 2200435 TCACTGTCCTAAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1425716 13 - 13651311 TCACTGTCCTAAC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e panPan2.chr2A 1396687 0 + 114371477 C a score=2799.000000 s hg38.chr2_KI270774v1_alt 160963 3 + 223625 ACA s gorGor5.CYUI01015607v1 1420962 3 + 1464242 ACA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1143665 3 + 81552678 GCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1473090 3 + 108979918 GCG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1445537 3 - 111193037 GCG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1473516 3 + 3644372 GCG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1427984 3 - 10304083 GCG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1505486 3 - 107702431 GCG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 993484 2 - 2200435 G-G i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1425729 3 - 13651311 GTG i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e panPan2.chr2A 1396687 0 + 114371477 C e panTro5.chr2A 1447695 1 + 111504155 I a score=7278.000000 s hg38.chr2_KI270774v1_alt 160966 2 + 223625 CA s panTro5.chr2A 1447696 2 + 111504155 CA i panTro5.chr2A I 1 C 0 s gorGor5.CYUI01015607v1 1420965 2 + 1464242 CA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1143668 2 + 81552678 CA i nomLeu3.chr19 C 0 I 10 s rheMac8.chr13 1473093 2 + 108979918 CG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1445540 2 - 111193037 CG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1473519 2 + 3644372 CG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1427987 2 - 10304083 CG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1505489 2 - 107702431 CG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 993486 2 - 2200435 CG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1425732 2 - 13651311 CG i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e panPan2.chr2A 1396687 0 + 114371477 C a score=7497.000000 s hg38.chr2_KI270774v1_alt 160968 2 + 223625 CA s panTro5.chr2A 1447698 2 + 111504155 CG i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1420967 2 + 1464242 CA i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1473095 2 + 108979918 CA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1445542 2 - 111193037 CA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1473521 2 + 3644372 CA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1427989 2 - 10304083 CA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1505491 2 - 107702431 CA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 993488 2 - 2200435 CA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1425734 2 - 13651311 CA i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e nomLeu3.chr19 1143670 10 + 81552678 I e panPan2.chr2A 1396687 0 + 114371477 C a score=49298.000000 s hg38.chr2_KI270774v1_alt 160970 10 + 223625 TCCACACAGT s panTro5.chr2A 1447700 10 + 111504155 TCCACACAGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1396687 10 + 114371477 TCCACACAGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1420969 10 + 1464242 TCCACACAGT i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1473097 10 + 108979918 TCCACACAGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1445544 10 - 111193037 TCCACACAGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1473523 10 + 3644372 TCCACACAGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1427991 10 - 10304083 TCCACACAGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1505493 10 - 107702431 TCCACACAGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 993490 10 - 2200435 TCCACACAGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1425736 10 - 13651311 TCCACACAGC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e nomLeu3.chr19 1143670 10 + 81552678 I a score=335167.000000 s hg38.chr2_KI270774v1_alt 160980 64 + 223625 AGCGCTTGGTGGGGAGCATCAGCCGGACGGAGGAGGCTTATGTGGGTGAGAAGATCG-AGTTAGA s panTro5.chr2A 1447710 64 + 111504155 AGCGCTTGGAGGGGAGCATCAGCCGGACGGAGGAGGCTTATGTGGGTGAGAAGATCG-AGTTAGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1396697 64 + 114371477 AGCGCTTGGAGGGGAGCATCAGCCGGACGGAGGAGGCTTATGTGGGTGAGAAGATCG-AGTTGGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1420979 64 + 1464242 AGCGCTTGGAGGGGAGCATCAGCCGGACGGAGGAGGCTTATGTGAGTGAGAAGATCG-AGTTAGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1143680 64 + 81552678 AGTGCTTGGCGGGGAGCATCAGCCGGACGGAGGAGGCTTATGTGGGTGAGAAGATCG-AGTTAGA i nomLeu3.chr19 I 10 C 0 s rheMac8.chr13 1473107 65 + 108979918 AGTGCTCGGCTGGGAGCATCCGCCGGACGGAGGAGGCTTGTGTGAGTGAGAGGAGCGGAGTTAGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1445554 65 - 111193037 AGTGCTCGGCTGGGAGCATCCGCCGGACGGAGGAGGCTTGTGTGAGTGAGAGGAGCGGAGTTAGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1473533 65 + 3644372 AGTGCTCGGCTGGGAGCATCCGCCGGACGGAGGAGGCTTGTGTGAGTGAGAGGAGCGGAGTTAGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1428001 65 - 10304083 AGTGCTCGGCTGGGAGCATCCGCTGGACGGAGGAGGCTTGTGTGAGTGAGAGGAGCGCAGTTAGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1505503 65 - 107702431 AGTGCTCGGCTGGGAGCATCCGCCGGACGGAGGAGGCTTGCATGGGTGAGAGGAGCGGAATTAGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 993500 65 - 2200435 AGTGCTCGGCTGGGAGCATCCGCCGGACGGAGGAGGCTTGTGTGGGTGAGAGGAGCGGAGTTAGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1425746 65 - 13651311 AGCGCTCGGCTGGGAGCATCAGCCGGACGGAGGAGGCTTGTGTGGGTGAGAGGAGCGGAGTTAGA i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1765287 1309 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C a score=4036718.000000 s hg38.chr2_KI270774v1_alt 161044 698 + 223625 AATGAAAACAGGAACCTTGTCACTATGTGAAGTAAAAATCATCAGGCACCCACGTCGCTTTCAAGCAGCGACTCAGACACTTTCCTGCTTCCCCGTGCAAACGGGAATATAAACC---CAGGAGCTGCTGAGCGGTGGAATCCAGGTCCTCGTCTCCATGAGTCTGGACTTCCGGCCACACG----CGTGGGGAGGC--AGGTCCCAGACGGCTGCCTTCTCCCCTCTGCTCAACCC-------CTGAGGCCTTCGGCGCTCCTGTCTGCTTCCTTG-----CTTCTGTGCCCCTT------------CCCTGACTGCGACCTCCACGGGCAGA--------TGTTCATCCATTTAATTCTTG-TTTCTCAGGACCCACAA-----TTTG--CCAGGT--TGCTTCATAA--ATATATGTAGAGTTTGTGAATGAAGTAG-AATCTCAAAAATAATTCTGGAAGTCCTGCCCCTTCTGTCTCCTCAGGAGCAGGATTTGGTTTGAACCTTCTT----TGAGTGAGAACCTCATCCAGCCCAGGGAGC-TGTGAGAAGAGCAGCTG--CCTCTGATCCCTGGAGCCCGTT--CACAGAGCGGGAAACGCCCA-ATTGTCACGCACCCTGTTGTCTTTCTTCTCCATGGAGTTCTGGGATT-ATTTAGAGGCGTGAATTATTACCAG---------------GCCCAGTCATTG-TAGATTAGAGACAGTTTAATTCCAAGTTACTGAGAATCCT-ACTGACCTAGAAATAATGACATTTGG s panTro5.chr2A 1447774 702 + 111504155 AATGAAAACAGGAACCTTGTCACCATGTGAAGTAAAAATCATCAGGCACCCACGTCGCTTTCAAGCAGCGACTCAGACACTTTCCTGCTTCCCCGTGCAAACGGGAATGTAAACC---CAGGAGCTGCTGAGCGGTGGAATCCAGGTCCTCGTCTCCGTGAGCCTGGACTTCCGGCCACACG----CGTGGGGAGGC--AGGTCCCGGACGGCTGCCTTCTCCCCTCTGCTCAACCCG------CTGAGGCCTTCGGCGCTCCTGTCTGCTTCCTCG--CTTCTTCTGTGCCCCTT------------CCCTGACTGCGACCTCCACGGGCAGA--------TGTTCATCCATTTAATTCTTT-TTTCTCAGGACCCACAA-----TTTG--CCAGGT--TGCTTCATAA--ATATATGTTGAGTTTGTGAATGAAGTAG-AATCTCAAAAACAATTCTGGAAGTCCTGCCCCTTCTGTCTCCTCAGGAGCAGGATTTGGTTTGAACCTTCTT----TGAGTGAGAACCTCATCCAGCCCAGGGAGC-TGTGAGAAGAGCAGCTG--CCTCTGATCCCTGGAGCCCGTT--CACAGAGCGGGAAACGCTCA-ATTGTCACGCACCCTGTTGTCTTTCTTCTCCATGGAGTTCTGGGATT-ATTTAGAGGCGTGAATTATTACCAG---------------GCCCAGTCATTG-TAGATTAGAGACAGTTTAATTCCAAGTTACTGAGAATCCC-ACTGACCTAGAAATAATGACATTTGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1396761 702 + 114371477 AATGAAAACAGGAACCTTGTCACCATGTAAAGTAAAAATCATCAGGCACCCACGTCGCTTTCAAGCAGCGACTCAGACACTTTCCTGCTTCCCCGTGCAAACGGGAATGTAAACC---CAGGAGCTGCTGAGCGGTGGAATCCAGGTCCTCGTCTCCGTGAGCCTGGACTTCCGGCCACACG----CGTGGGGAGGC--AGGTCCCAGACGGCTGCCTTCTCCCCTCTGCTCAACCCC------CTGAGGCCTTCGGCGCTCCTGTCTGCTTCCTCG--CTTCTTCTGTGCCCCTT------------CCCTGACTGCGACCTCCACGGGCAGA--------TGTTCATCCATTTAATTCTTT-TTTCTCAGGACCCACAA-----TTTG--CCAGGT--TGTTTCATAA--ATATATGTTGAGTTTGTGAATGAAGTAG-AATCTCAAAAACAATTCTGGAAGTCCTGCCCCTTCTGTCTCCTCAGGAGCAGGATTTGGTTTGAACCTTCTT----TGAGTGAGAACCTCATCCAGCCCAGGGAGC-TGTGAGAAGAGCAGCTG--CCTCTGATCCCTGGAGCCCATT--CACAGAGCGGGAAACGCTCA-ATTGTCACGCACCCTGTTGTCTTTCTTCTCCATGGAGTTCTGGGATT-ATTTAGAGGCGTGAATTATTACCAG---------------GCCCAGTCATTG-TAGATTAGAGACAGTTTAATTCCAAGTTACTGAGAATCCC-ACTGACCTAGAAATAATGACATTTGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1421043 699 + 1464242 AATGAAAACAGGAACCTTGTCACCATGTGAAGTAAAAATCATCAGGCACCCACGTCGCTTTCAAGCAGCGACTCAGACACTTTCCTGCTTCCCCGTGCAAACGGGAATGTAAACC---CAGGAGCTGCTGAGCGGTGGAATCCAGGTCCTCGTCTCCGTGAGCCTGGACTTCCGGCCACACG----CGTGGGGAGGC--AGGTCCCAGACGGCTGCCTTCTCCCCTCTGCTCAACCCC------CTGAGGCCTTCGGCGCTCCTGTCTGCTTCCTCG-----CTTCTGTGCCCCTT------------CCCTGACTGCGACCTCTACGGGGAGA--------TGTTCGTCCATTTAATTCTTT-TTCCTCAGGACCCGCAA-----TTTG--CCAGGT--TGCTTCATAA--ATATATGTAGAGTTTGTGAATGAAGTAG-AATCTCAAAAATAATTGTGGAAGTCCTGCCCCTTCTGTCTCCTCAGGAGCAGGATTTGGTTTGAACCTTCTT----TGAGTGAGAACCTCATCCAGCCCAGGGAGC-TGTGAGAAGAGCAGCTG--CCTCTGATCCCTGGAGCCCGTT--CACAGAGCGGGAAACGCCCA-ATTGTCACGCACCCTGTTGTCTTTCTTCTCCAGGGAGTTCTGGGATT-ATTTAGAGGTGTGAATTATTACCAG---------------GCCCAGTCATTG-TAGATTAGAGACAGTTTAATTCCAAGTTACTGAGAATCCC-ACTGACCTAGAAATAATGACATTTGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1143744 700 + 81552678 AATGAAAGCAGGAACCTTGTCACCGTGTGAAGTAGAAATCATCAGGCACCCATGTGGCTTTCAAGCAGCGACTCAGACACTTTCCTGCTTCCTTGTGCAAACAGGAATGTAAACC---CAGGAGCTGCTGAGCGGTGGAATCCAGGTCCTCGTCTCAGTGAGCCTGGACTTCCCGCCACACG----CGTGGGGAGGC--AGACCCCAGACGGCTGCCTTCTCCCCTCTGCTCATCCCC------CTGAGGCCTTTGGCGCTCCTGTTTGCTTCCTCG--CTTCTTCTGTGCCCCTT------------CCCTGACTGCGACCTCCACGGGGAGA--------CATTCATCCATTTAATTAATT-TTTGTCAGGACCCACAA-----TTCA--ACAGGT--TGATTCATAA--ATATATGTTGAATCTCTGAAGGAAGTGG-AATCTCAAAAATAATTCTGGAAGTCCTG-CCCTGCTGTCACCTCAGGAGCAGGATTTGGTTTGAACCTTCTT----TGAGTGAGAACCTCATCCGGCCCAGGGAGC-TGTGAGAAGAGCAGCTG--CCTCTGATCCCTGGAGCCCGTT--CACAGAGCAGGAAACGTCCA-ATTGTCATGCACTC-ATTGTCTTTCTTCTCCATGGAGTTCTGGGATT-ATTTAGAGGCATAAATTATTACCAG---------------GCCCTGTCATTG-TAGATTAGAGACAGTTTAATTCCAAATTACCGAGAATCCC-ACTGACCTAGAAATAATGACATTTGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1473172 703 + 108979918 AATGAAAGCAGGAACCTTGTCACCATGTGAAGTAAAAATCATCAGGCACCCACGTCGCTTTCAAGCAGCGACTCAGACACTTTCCTGCTTCCCTGTGCAAAGGGGAATGTAAACC---CAGGAGCTGCTGAGCGGTGGAATCCAGGTCCTCGTCTCCGTGAGCCTGGACTTCCCACCACACA----CCTGGGGAAGC--AGGTCCCAGACGGCCGCCCTCTCCCCTCTGCTCATCCC-------CTGAGGCCTTCGGGGCTCCTGTTTGCTTCCTTG--CTGCTTCCGTGCCGCTT------------CCCTGACTGCGAGCTCCACAGAGGGA--------TGTTCATCTGTTTAATTCTTTTTTTCTCAGGACCCACAA-----TTTG--CCAGGT--TGCTTCGTAA--ATATATATTGAATTTGTGAATGAAGTAGAAATTTCAAAAATAATTCTGGAAATCCTGGCCCTGCTGTAGCCTCGGGAGCAGGATTTGGTTTGAACCTTCTT----TGAGTGAGAACCTCATCCAGCCCAGGGAGC-TGTGAGAAAAGAGGCTG--CCTCGGATCCCTGGAGCCCATT--CACAGGGCCAGAGACGCCCA-GTTGTCACACATCCTGCTGTCTTTCTTCTCCATGGAGTTCTGGAATT-ATTTAGAGGTGTGAATTGTTACCAG---------------GCCCTGTCATTA-TAGATTAGAGATAGTTTAATTCCAAATTTCTGAGAATCCC-ACTGATCTGGAAATAATGACATTTGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1445619 702 - 111193037 AATGAAAGCAGGAACCTTGTCACCATGTGAAGTAAAAATCATCAGGCACCCACGTCGCTTTCAAGCAGCGACTCAGACACTTTCCTGCTTCCCTGTGCAAAGGGGAATGTAAACC---CAGGAGCTGCTGAGCGGTGGAATCCAGGTCCTCGTCTCCGTGAGCCTGGACTTCCCACCACACA----CCTGGGGAAGC--AGGTCCCAGACGGCTGCCCTCT-CCCTCTGCTCATCCC-------CTGAGGCCTTCGGGGCTCCTGTTTGCTTCCTTG--CTGCTTCCGTGCCGCTT------------CCCTGACTGCGAGCTCCACAGAGGGA--------TGTTCATCTGTTTAATTCTTTTTTTCTCAGGACCCACAA-----TTTG--CCAGGT--TGCTTCGTAA--ATATATATTGAATTTGTGAATGAAGTAGAAATTTAAAAAATAATTCTGGAAATCCTGGCCCTGCTGTAGCCTCGGGAGCAGGATTTGGTTTGAACCTTCTT----TGAGTGAGAACCTCATCTAGCCCAGGGAGC-TGTGAGAAAAGAGGCTG--CCTCGGATCCCTGGAGCCCGTT--CACAGGGCCAGAGATGCCCA-GTTGTCACACATCCTGCTGTCTTTCTTCTCCATGGAGTTCTGGAATT-ATTTAGAGGTGTGAATTGTTACCAG---------------GCCCTGTCATTA-TAGATTAGAGATAGTTTAATTCCAAATTTCTGAGAATCCC-ACTGACCTGGAAATAATGACATTTGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1473598 703 + 3644372 AATGAAAGCAGGAACCTTGTCACCATGTGAAGTAAAAATCATCAGGCACCCACGTCGCTTTCAAGCAGCGACTCAGACACTTTCCTGCTTCCCTGTGCAAAGGGGAATGTAAACC---CAGGAGCTGCTGAGCGGTGGAATCCAGGTCCTCGTCTCCCTGAGCCTGGACTTCCCACCACACA----CCTGGGGAAGC--AGGTCCCAGACGGCCGCCCTCTCCCCTCTGCTCATCCC-------CTGAGGCCTTCGGGGCTCCTGTTTGCTTCCTTG--CTGCTTCCGTGCCGCTT------------CCCTGACTGCGAGCTCCACAGAGGGA--------TGTTCATCTGTTTAATTCTTTTTTTCTCAGGACCCACAA-----TTTG--CCAGGT--TGCTTCGTAA--ATATATATTGAATTTGTGAATGAAGTAGAAATTTCAAAAATAATTCTGGAAATCCTGGCCCTGCTGTAGCCTCGGGAGCAGGATTTGGTTTGAACCTTCTT----TGAGTGAGAACCTCATCCAGCCCAGGGAGC-TGTGAGAAAAGAGGCTG--CCTCGGATCCCTGGAGCCCGTT--CACAGGGCCAGAGACGCCCA-GTTGTCACACATCCTGCTGTCTTTCTTCTCCATGGAGTTCTGGAATT-ATTTAGAGGTGTGAATTGTTACCAG---------------GCCCTGTCATTA-TAGATTAGAGATAGTTTAATTCCAAATTTCTGAGAATCCC-ACTGACCTGGAAATAATGACATTTGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1428066 704 - 10304083 AATGAAAGCAGGAACCTTGTCACCATGTGAAGTAAAAATCATCAGGCACCCACGTCGCTTTCAAGCAGCGACTCAGACACTTTCCTGCTTCCCTGTGCAAAGGGGAATGTAAACC---CAGGAGCTGCTGAGCGGTGGAATCCAGGTCCTCGTCTCCGTGAGCCTGGGCTTCCCACCACACA----CCTGGGGAAGC--AGGTCCCAGATGGCCGCCCTCTCCCCTCTGCTCATCCC-------CTGAGGCCTTCGGGGCTCCTGTTTGCTTCCTTG--CTGCTTCCGTGCCGCTT------------CCCTGACTGCGAGCTCCACAGAGAGA--------TGTTCATCTGTTTAATTCTTTTTTTCTCAGGACCCACAA-----TTTG--CCAGGT--TGCTTCATAAATATATATATTGAATTTGTGAATGAAGTAGAAATTTCAAAAATAATTCTGGAAGTCCTGGCCCTGCTGTAGCCTCGGGAGCAGGATTTGGTTTGAACCTTCTT----TGAGTGAGAACCTCA-CCAGCCCAGGGAGC-TGTGAGAAGAGAGGCTG--CCTCGGACCCCTGGAGCCCGTT--CACAGGGCCAGAGACGCCCA-ATTGTCACGCATCCTGCTGTCTTTCTTCTCCATGGAGTTCTGGAATT-ATTTAGAGGTGTGAATTGTTACCAG---------------GCCCTGTCATTA-TAGATTAGAGATAGTTTAATTCCAAATTTCTGAGAATCCC-ACTGATCTGGAATTAATGACATTTGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1505568 703 - 107702431 AATGAAAGCAGGAACCTTGTCACTATGTGAAGTAAAAATCATCAGGCACCCACGTCGCTTTCAAGCAGCGACTCAGACACTTTCCTCCTTCCCTGTGCAAAGGGGAATGTAAACC---CAGGAGCTGCTGAGCGGTGGAATCCAGGTCCTCGTCTCCGTGAGCCTGGACTTCCCACCACACA----CCTGGGGAAGC--AGGTCCCAGACGGCCGCCCTCTCCCCTCTGCTCATCCC-------CTGAGGCCTTCGGCGCTCCTGTTTGCTTCCTTG--CTGCTTCCGTGCCCCTT------------CCCTGACTGCGAGCTCCACAGAGAGA--------TGTTCATCTGTTTAATTCTTTTTTTCTCAGGACCCACAA-----TTTG--CCAGAT--TGCTTCATAA--ACATATATTGAATTTGTGAATGAAGTAGAAATTTCAAAAATAATTCTGGAAGTCCTGGCCCTGCTGTAGCCTCGGGAGCAGGATTTGGTTTGAACCTTCTT----TGAGTGAGAACCTCATCCAGCCCAGGGAGC-TGTGAGAAAAGAGGCTG--CCTCGGATCCCTGGAGCCCGTT--CACAGGGCCAGAAACGCCCA-ATTGTCACACATCCTGCTGTCTTCCTTCTCCACGGAGTTCTGGAATT-ATTTAGAGGTGTGAATTGTTACCAG---------------GCCCTGTCATTA-TAGATTAGAGATAGTTTAATTCCAAATTTCTGAGAATCCC-ACTGATCTGGAAATAATGACATTTGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 993565 703 - 2200435 AATGAAAGCAGGAACCTTGTCACCATGTGAAGTAAAAATCATCAGGCACCCACGTCGCTTTCAAGCAGCGACTCAGACACTGTCCTGCTTCCCTGTGCAAAGGGGAATGTAAACC---CAGGAGCTGCTGAGCGGTGGAATCCAGGTCCTCGTCTCCGTGAGCCTGGACTTCCCACCACACA----CCTGGGGAAGC--AGGTCCCAGACGGCCGCGCTCTCCCCTCTGCTCATCCC-------CTGAGGCCTTCGGCGCTCCTGTTTGCTTCCTTG--CTGCTTCCGTGCCGCTT------------CCCTGACTGCGAGCTCCACAGAGAGA--------TGTTCGTCTGTTTAATTCTTTTTTTCTCAGGACCCACAA-----TTTG--CCAGGT--TGCTTCGTAA--ATATATATTGAATTTGTGAATGAAGTAGAAATTTCAAAAATAATTCTGGAAGTCCTGGCCCTGCTGTAGCCTCGGGAGCAGGATTTGGTTTGAACCTTCTT----TGAGTGAGAACCTCATCCAGCCCAGGGAGC-TGTGAGAAGAGAGGCTG--CCTCGGATCCCTGGAGCCGGTT--CACAGGGCCAGAGACGCCCA-ATTGTCACACATCCTGCTGTCTTTCTTCTCCATGGAGTTCTGGAATT-ATTTACAGGTGTGAATTGTTACCAG---------------GCCCTGTCATTA-TAGATTAGAGATAGTTTAATTCCAAATTTCTGAGAATCCC-ACTGATCTGGAATTAATGACATTTGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1425811 703 - 13651311 AATGAAAGCAGGAACCTTGTCACCATGTGAAGTAAAAATCATCAGGCACCCACATCTCTTTCAAGCAGCGACTCAGACACTTTCCTGCTGCCCTGTGCAAAGGGGACTGTAAACC---CAGGAGCTGCGGAGCGGTGGAATCCAGGTCCTCGTCTCCCTGAGCCTGGACTTCCCACCACACA----CCTGGGGAAAC--AGGTCCCAGACGGCTGCCCTCTCCCCTCTGCTCATCCC-------CTGAGGCCTTCGGGGCTCCtgtttgcttccgtg--ctgcttccgtgcccctt------------ccctgactgcgagctccacagagaga--------tgttcatctgtttaattctttctttctcaggacccacaa-----tttg--tcaggt--tgcttcataa--atatatattgaatttgtgaatgaaGTAGAAATTTCAAAAATAATTCTGGAAGTCCTGGCTCTGCTGTAGCCTCAGGAGCAGGATTTGGTTTGAATGTTCTT----TGAGTGAGAACCTCATCCAGCCCAGGGAGC-TGTGAGAAAAGAGGCTG--CCTCGGATCCCTGGAGCCTGCT--CACAGGGAGAGAAACGCCCA-GTTGTCACACATCCTGCTGTCTTTCTTCTCCATGGAGTTCTGGAATT-ATTTAGAGGTGTGAATTATTACCAG---------------GCCCTGTCATTA-TAGATTAGAGACAGTTTAATTCCAGATTTCTGAGAATCCC-ACTGACCTGAAAATAATGACATTTGG i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1766596 771 + 4416731 AACGTGACCAGGAATGTTGTCATCTTTCA---TAAAAATAATCAATGACCC-TGCTACTTTCAAGTAGCTCGTCAGCCATCTTC---CTTTCTTGACCAAGGTAGAGTACAAGTCGATCAGGAGATCAGTATTATTAAAACAGCATTTCAAGTTTTTATAATACCTTATAGCCTTCTGCACATTACCTTGGTGAAGTCAAAGCCCAAGCAATtttttctctttcctcgatttatcaccacctaattattgtattatatttttttgctggttttattatattttgtctgtgtctcctctaccctggtcccccagaatgtaagctcctcaaagacaaagatttttgtatttttgcttaattgttttattcccagcacctagaatagactttgcactaagtggtgcttcataa--atatatgttaaatgaatgaatGAAGTAGAAATCCCAAGAATCACCACAGGAGTCCTGGCCCTGCTGTCTCTTAAGAGTCAGGATTTGATTTAAACATGATCTAAATGAATAAGAACTTCAGACCACCCAGGAAACACAGAAGAAGAGCAGTTGGATTTCAAATCAATGATGACTATTTACATAGGAAGAAAAATGTTAAGATTTTCATGTATCCGATTATCTTTCTTCTCACAGTATCTCTGTGATTAACTTAGTGGTATGAATTATTCACAGTGTGTCTCTATGTTAGGTTTGTACTTGTTAAATTGGAGAAAGCTTAATTCTAGAATTCTGAGAATCCCAACTGATATGGAAATAATGACATCTGC i dasNov3.JH576208 I 1309 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e calJac3.chr14 1426398 0 - 108792865 C a score=173583.000000 s hg38.chr2_KI270774v1_alt 161742 56 + 223625 Ttgctgcggctgtggctgctgctgctcctccttgtcctcctcctcgtcctcctcc---t s panTro5.chr2A 1448476 44 + 111504155 Ttgctgcggctgtggctgctgctgctcctcctt------------gtcctcctcc---t i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1397463 44 + 114371477 Ttgctgcggctgtggctgctgctgctcctcctt------------gtcctcctcc---t i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1421742 56 + 1464242 TTGCTGCGGCTGTGGCTGCTGCTGctcctccttcttctcctcctcctcctcctcc---t i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1144444 56 + 81552678 Ttgctgtggctgtggctgctgctgcttcttctcctcctcttcctccttctcttcc---t i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1473875 51 + 108979918 TTGC-----ctcctgctgctgctgctcctcctcctcctcctcctcttcctcctcc---t i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1446321 51 - 111193037 TTGC-----ctcctgctgctgctgctcctcctcctcctcctcctcttcctcctcc---t i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1474301 54 + 3644372 TTGC-----ctcctgctgctgctgctcctcctcctcctcctcctcttcctcctcctctt i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1428770 45 - 10304083 TTGC-----------ctgctgctgctcctccttctcctcctcttctccttcttct---c i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1506271 44 - 107702431 TTGc-----------ctgctgctgctcctcctcctcttcctcttctccttcttct---- i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012103754v1 994268 44 - 2200435 TTGc-----------ctgctgctgctcctccttctcctcctcttctcctccttct---- i manLeu1.NW_012103754v1 C 0 I 46 s colAng1.NW_012118821v1 1426514 51 - 13651311 TTGC-----ctgctgctgctgctgctcctcctcctcctccttctcctcttcctcc---t i colAng1.NW_012118821v1 C 0 I 9 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767367 0 + 4416731 C e calJac3.chr14 1426398 0 - 108792865 C a score=22938.000000 s hg38.chr2_KI270774v1_alt 161798 8 + 223625 c--------------------------ctcttct s panTro5.chr2A 1448520 8 + 111504155 c--------------------------ctcttct i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1397507 8 + 114371477 c--------------------------ctcttct i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1421798 34 + 1464242 cctcctcctcctcctcctcctcctcctcTCTTCt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1144500 8 + 81552678 c--------------------------ctcttct i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1473926 8 + 108979918 c--------------------------ttcttct i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1446372 8 - 111193037 c--------------------------ttcttct i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1474355 8 + 3644372 c--------------------------ttcttct i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1428815 8 - 10304083 c--------------------------ttcttct i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1506316 8 - 107702431 c--------------------------cttttgt i chlSab2.chr14 I 1 I 32 s colAng1.NW_012118821v1 1426574 8 - 13651311 c--------------------------ctcttct i colAng1.NW_012118821v1 I 9 I 6 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767367 0 + 4416731 C e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 994312 46 - 2200435 I a score=8595.000000 s hg38.chr2_KI270774v1_alt 161806 2 + 223625 tc s panTro5.chr2A 1448528 2 + 111504155 tc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1397515 2 + 114371477 tc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1421832 2 + 1464242 tc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1144508 2 + 81552678 tc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1473934 2 + 108979918 tc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1446380 2 - 111193037 tc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1474363 2 + 3644372 tc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1428823 2 - 10304083 tc i cerAty1.NW_012000820v1 C 0 I 33 s colAng1.NW_012118821v1 1426588 2 - 13651311 tc i colAng1.NW_012118821v1 I 6 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767367 0 + 4416731 C e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 994312 46 - 2200435 I e chlSab2.chr14 1506324 32 - 107702431 I a score=39956.000000 s hg38.chr2_KI270774v1_alt 161808 12 + 223625 ttctccttcttc s panTro5.chr2A 1448530 12 + 111504155 ttctccttcttc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1397517 12 + 114371477 ttctccttcttc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1421834 12 + 1464242 ttctccttcttc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1144510 12 + 81552678 tcctccttcttc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1473936 12 + 108979918 ttctccttcttc i rheMac8.chr13 C 0 I 35 s macFas5.chr13 1446382 12 - 111193037 ttctccttcttc i macFas5.chr13 C 0 I 35 s macNem1.NW_012011978v1 1474365 12 + 3644372 ttctccttcttc i macNem1.NW_012011978v1 C 0 I 35 s colAng1.NW_012118821v1 1426590 12 - 13651311 ttctccttcttc i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767367 0 + 4416731 C e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 994312 46 - 2200435 I e chlSab2.chr14 1506324 32 - 107702431 I e cerAty1.NW_012000820v1 1428825 33 - 10304083 I a score=1365.000000 s hg38.chr2_KI270774v1_alt 161820 1 + 223625 t s panTro5.chr2A 1448542 1 + 111504155 t i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1397529 1 + 114371477 t i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1421846 1 + 1464242 t i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1144522 1 + 81552678 t i nomLeu3.chr19 C 0 C 0 s colAng1.NW_012118821v1 1426602 1 - 13651311 t i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767367 0 + 4416731 C e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 994312 46 - 2200435 I e chlSab2.chr14 1506324 32 - 107702431 I e cerAty1.NW_012000820v1 1428825 33 - 10304083 I e macNem1.NW_012011978v1 1474377 35 + 3644372 I e macFas5.chr13 1446394 35 - 111193037 I e rheMac8.chr13 1473948 35 + 108979918 I a score=-11146.000000 s hg38.chr2_KI270774v1_alt 161821 5 + 223625 tc------------ttt- s panTro5.chr2A 1448543 5 + 111504155 tc------------ttt- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1397530 5 + 114371477 tc------------ttt- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1421847 7 + 1464242 tc----------ttttt- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1144523 17 + 81552678 tcctcttcttctttttt- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1473983 4 + 108979918 --------------tttt i rheMac8.chr13 I 35 I 1 s macFas5.chr13 1446429 4 - 111193037 --------------tttt i macFas5.chr13 I 35 I 1 s macNem1.NW_012011978v1 1474412 4 + 3644372 --------------tttt i macNem1.NW_012011978v1 I 35 I 1 s cerAty1.NW_012000820v1 1428858 4 - 10304083 --------------tttt i cerAty1.NW_012000820v1 I 33 I 1 s manLeu1.NW_012103754v1 994358 4 - 2200435 --------------tttt i manLeu1.NW_012103754v1 I 46 I 1 s colAng1.NW_012118821v1 1426603 5 - 13651311 -------------tcctT i colAng1.NW_012118821v1 C 0 I 34 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767367 0 + 4416731 C e calJac3.chr14 1426398 0 - 108792865 C e chlSab2.chr14 1506324 32 - 107702431 I a score=1658926.000000 s hg38.chr2_KI270774v1_alt 161826 285 + 223625 --tttttttgagacagtctcactctgtcacccaggctggagtatagtggtgagaccttggctcactgcaaccaccacctcccaggttcaagcgattctcctgcctcagcctctcaagtagctgagaccacagacatgtgccaccactcccagctgatttttatatttttaatagacatggggttttgccatgt---------tggctaggatggtcttgaactcctttcctcaagtgatccgcctgcctcaggctcccaaagtgctgggattacaggcctgagccactgcgcccag s panTro5.chr2A 1448548 285 + 111504155 --tttttgagacagagtctcacgctgtcacccaggctggagtatagtggtgagaccttggcttactgcaatcaccacctcccgggttcaagcgattctcctgcctcagcctctcaagtagctgagaccacagacatgtgccaccactcccagctgatttttatacttttaatagacatggggttttgccaggt---------tggctaggatggtcttgaactcctttcctcaagtgatccgcctgcctcaggctcccaaagtgctgggattacaggcctgagccactgcacccag i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1397535 294 + 114371477 --tttttgagacagagtctcacgctgtcacccaggctggagtatagtggtgagaccttggcttactgcaatcaccacctcccgggttcaagcgattctcctgcctcagcctctcaagtagctgagaccacagacatgtgccaccactcccagctgatttttatacttttaatagacatggggttttgccaggttggctaggatggctaggatggtcttgaactcctttcctcaagtgatccgcctgcctcaggctcccaaagtgctgggattacaggcctgagccactgcacccag i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1421854 285 + 1464242 --tttttgagacagagtctcactctgtcacccaggctggagtatagtggtgagaccttggctcactgcaaccaccacctcccgggttcaagcgattctcctgcctcagcctctcaagtagctgagaccacagacatgtgccaccactcccagctgatttttatacttttaatagacatggggttttgccaggt---------tggctaggatggtcttgaactcctttcctcaagtgatctgcctgcctcaggctcccaaagtgctgggattacaggcctgagccactgcgcccag i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1144540 285 + 81552678 --tttttgagacagagtctcactctgtcactcaggctgcagtatagtggcgagatcttggctcactgcaaccactgcctcctgggttcaagtgattttcctacctcagcctctcaagtagctgagaccacagacatgtgccaccactcccggctaatttttgtatttttggtagacgtggggtttttccatgt---------tggctaggatggtcttgaactcctttcctcaagtgatctgcctgcctcaggctcccaaagtgctgggattacaggcctgagccaccacgcccag i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1473988 287 + 108979918 tgtttttgagacagagtctcactctgtcacccgggctggagtatagtggtaagatctcggctcactgcaaccaccgcctcccaggttcaagcgattcttctgcctcagcctctcaagtagctgagaccacagacacgtgccaccactcccagctaatttttgtatttttaatagacatggggttttgccatgt---------tggccaggatggtcttgaactcctttcctcaagtgatccgcctgcctcaggctcccaaagtgctgggattacaggcctgagccaccatgcccag i rheMac8.chr13 I 1 C 0 s macFas5.chr13 1446434 287 - 111193037 tgtttttgagacagagtctcactctgtcacctgggctggagtatagtggtaagatctcggctcactgcaaccaccgcctcccaggttcaagcgattctcctgcctcagcctctcaagtagctgagaccacagacacgtgccaccactcccagctaatttttgtatttttaatagacatggggttttgccatgt---------tggccaggatggtcttgaactcctttcctcaagtgatccgcctgcctcaggctcccaaagtgctgggattacaggcctgagccaccatgcccag i macFas5.chr13 I 1 C 0 s macNem1.NW_012011978v1 1474417 287 + 3644372 tgtttttgagacagagtctcactctgtcacccgggctggagtatagtggtaagatctcggctcactgcaaccaccgcctcccaggttcaagcgattctcctgcctcagcctctcaagtagctgagaccacagacacgtgccaccactcccagctaatttttgtatttttaatagacatggggttttgccatgt---------tggccaggatggtcttgaactcctttcctcaagtgatccgcctgcctcaggctcccaaagtgctgggattacaggcctgagccaccatgcccag i macNem1.NW_012011978v1 I 1 C 0 s cerAty1.NW_012000820v1 1428863 287 - 10304083 tttttttgagacagagtctcactctgtcacccgggctggagtatagtggtgagatctcggctcactgcaaccaccgcctcccaggttcaagcgattctcctgcctcagcctctcaagtagctgagaccacagacacgtgccaccactcccagctaatttttgtatttttaatagacatggggttttgccatgt---------tggccaggatggtcttgaactcctttcctgaagtgatccgcctgcctcaggctcccaaagtgctgggattacaggcctgagccaccgcgcccag i cerAty1.NW_012000820v1 I 1 C 0 s chlSab2.chr14 1506356 287 - 107702431 tttttttgagacagagtctcactctgtcaccggggctggagtatagtggtgagatctcggctcactgcaaccaccgcctcccaggttcacgcgattctcctgcctcagcctctcaagtagctgagaccacagacacatgccaccactcccagctaatttttgtatttttaatagacatggggttttgccatgt---------tggccaggatggtcttgaactcctttcctcaagtgatccgcctgcctcaggctcccaaagtgctgggattacaggcctgagccaccacgcccag i chlSab2.chr14 I 32 C 0 s manLeu1.NW_012103754v1 994363 287 - 2200435 tttttttgagacagagtctcactctgtcacccgggctggagtatagtggtgagatctcagctgactgcaaccaccgcctcccaggttcaagcgattcttctgcttcagcctctcaagtagctgagaccacagacacatgccaccactcccagctaattttcgtatttttaatagacatggggttttgccatgt---------tggccaggatggtcttgaactcctttcctcaagtgatccgcctgcctcaggctcccaaagtgctgggattacaggcctgagccaccgcgcccag i manLeu1.NW_012103754v1 I 1 C 0 s colAng1.NW_012118821v1 1426642 287 - 13651311 tttttttgagacagagtctcactctgtcacccaggctggagtatagtggtgagatctcggctcactgcaaccaccacctcccaggttcaagcgattctcctgcctcagcctctcaagtagctgataccacagacacatgccaccactcccagctaatttttgtatttttaatagacatggggttttgccatgt---------tggccaggatggtcttgaactcctttcctcaagtgattcgcctgcctcaggctcccaaagtgctgggattacaggcgtgagccaccacgcccag i colAng1.NW_012118821v1 I 34 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767367 0 + 4416731 C e calJac3.chr14 1426398 0 - 108792865 C a score=2760476.000000 s hg38.chr2_KI270774v1_alt 162111 455 + 223625 TTGCCTTTTCTTATTATTA-ATGAAATAATA---ACAACAGCAAC--CAATAGGAAAAGTGTTCTTCTCTGTTTCATATTTACCTTCCTCAATTCATTTTCTGTGTGTTCTGC-TTTTTAAAAAACTGTGAACATTCTTTTCTTCTTGGTTTTACATTTCACTTTTGAATTTCCTTTTGTATTTTTTTCAGTTAATAGGTCCTCTTTGGTGCTTTTTGCAAAAACCTTTGATACATTAAAATAATAA---GTTGTGTTTAACGTGTCGATAGAGCCACTGCTGCGACTTCTAGCCGTATTTGAAAGATCCACGGTGGCCTGGGCCTGGA------AGCC---TCATTTTTCTCTCCCTGGTTCTACTGACTCGTAGTTTGGTAACTTTGTAATCTGAATCTCTCTTCTTCTGAAAAACATTAGATAATGAAAAGAGATGCCAGGGCAACCTTATGAAAGAGAAATAGCATCCCC s panTro5.chr2A 1448833 455 + 111504155 cTGCCTTTTCTTATTATTA-ATGAAATAATA---ACAACAGCAAC--CAATAGGAAAATTGTTCTTCTCTGTTTCATATTTACCTTCCTCAATTCATTTTCTGTGTGTTCTGC-TTTTTAAAAAACTGTGAACATTCTTTTCTTCTTGGTTTTACATTTCACTTTTGAATTTCCTTTTGTATTTTTTTCAGTTAATAGGTCCTCTTTGGTGCTTTTTGCAAAAACCTCTGATACATTAAAATAATTA---GTTGTGTTTAACGTGTCGATAGAGCCACTGCTGCGACTTCCAGCCGTATTTGAAAGATCCACGGTGGCCTGGGCCTGGA------AGCC---TCATTTTTCTCTCCCTGGTTCTACCGACTCATAGTTTGGTAATTTTGTAATCTGAATCTCTCTTCTTCTGAAAAACATTACACAATGAAAAGAGATGCCAGGGCAACTTTATGAAAGAGAAATAGCATCCCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1397829 455 + 114371477 cTGCCTTTTCTTATTATTA-ATGAAATAATA---ACAACAGCAAC--CAATAGGAAAATTGTTCTTCTCTGTTTCATATTTACCTTCCTCAATTCATTTTCTGTGTGTTCTGC-TTTTTAAAAAACTGTGAACATTCTTTTCTTCTTGGTTTTACATTTCACTTTTGAATTTCCTTTTGTATTTTTTTCAGTTAATAGGTCCTCTTTGGTGCTTTTTGCAAAAACCTCTGATACATTAAAATAATAA---GTTGTGTTTAACGTGTCGATAGAGCCACTGCTGCGACTTCCAGCCGTATTTGAAAGATCCACGGTGGCCTGGGCCTGGA------AGCC---TCATGTTTCTCTCCCTGGTTCTACCGACTCATAGTTTGGTAATTTTGTAATCTGAATCTCTCTTCTTCTGAAAAACATTACACAATGAAAAGAGATGCCAGGGCAACTTTATGAAAGAGAAATAGCATTCCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1422139 454 + 1464242 cTGCCTTTTCTTATTATTA-ATGAAATAATA---ACAGCAGCAAC--CAATAGGAAAAGTGTTCTTCTCTGTTTCATATTTACCTTCCTCAATTCATTTTCTGTGTGTTCTGC--TTTTAAAAAACTGTGAACATTCTTTTCTTCTTGGTTTTACATTTCACTTTTGAATTTCCTTTTGTATTTTTTTCAGTTAATAGGTCCTCTTTGGTGCTTTTTGCAAAAACCTTTGATACATTAAAATAATAA---GTTGTGTTTAACGTGTCGATAGAGCCACTGCTGCGACTTCTAGCCGTATTTGAAAGATCCACAGTGGCCTGGGCCTGGA------AGCC---TCATTTTTCTCTCCCTGGTTCTACCGACTCATAGTTTGGTAACTTTGTAATCTGAATCTCTCTTCTTCTGAAAAACATTAGATAATGAAAAGAGATGCCAGGGCAACTTTATGAAAGAGAAATAGCATCCCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1144825 449 + 81552678 cTGCCTTTTCATATTATTA-ATGAAATAATA---ACAACAGCAAC--CAATAGGAAGAGAGTTCTTCTCTGTTTCATATTTACCTTCCTCAATTCATTTTCTGTGTGTTCTGC-TTTTAAAAAAACTGTGAACATTCTTTTCTTCTTGGTTTTACATTTCACTTTTGAATTTCCTTTTGTATTTTTTTCAGTTAATAGGTCCTCTTTGGTGCTTTTTGCAAAAACCTTTGATACATTAAAATAATAA---GTTGTGTTTAACGTGTCGATAGAGCCACTGCTGCGACTTCCAGCCATATTTGAAAGATCCGCGGT------GGCCTGGA------AGGC---TCATTTTTCTCTCCCTGGTTCTACCGACTCATAGTTTGGTGACTTTGTAATCTGGATCTCTCTTCTTCTGAAAAACATTAGATAATGAAAAGAAATGCCAGGGCAACTTCATGAAAGAGAAATAGCATCCCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1474275 444 + 108979918 cTGCCTATTCTTATTATTA-ATGAAATAAT------AACAGAAAA--CAATAGG-AAAATGTTCTTCTCTGTTTCATATTTACCTTCCTCAGTTCATTTTCTGTGTGTTCTGC-TTTTTTAAAAAATGTGAACGTTCTTTTCTTCTTGGTTTTACATTTCACCTTTGAATTTCCTTTTGTGTTTTTTT-AGTTAATAGGTCCTCTTTGGTGCTTTTTGCAAAAACCTTTGATACATTAAAATAATAA---GTTGTGTTTAACGCGTCAGTAGAGCCGCTGCTGTAACTTCCAGCCATATTTGAAAGATCCGCAGT------GGCCTGGA------AGGC---TCATTTTTCTCTCCCTGTTTCTATCGACTCATAGTTTGGTAACTGTGTGATCTGAATCTCTCTTCTTCTGAAAAGCATTAGATAACGAAAAGAAATGCCAGGGCAACTTTATGAAAGAGAAATAGCATCCCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1446721 447 - 111193037 cTGCCTATTCTTATTATTA-ATGAAATAATA---ACAACAGAAAA--CAATAGG-AAAATGTTCTTCTCTGTTTCATATTTACCTTCCTCAGTTCATTTTCTGTGTGTTCTGC-TTTTTTAAAAAATGTGAACGTTCTTTTCTTCTTGGTTTTACATTTCACCTTTGAATTTCCTTTTGTGTTTTTTT-AGTTAATAGGTCCTCTTTGGTGCTTTTTGCAAAAACCTTTGATACATTAAAATAATAA---GTTGTGTTTAACGCGTCAGTAGAGCCGCTGCTGTAACTTCCAGCCATATTTGAAAGATCCGCAGT------GGCCTGGA------AGGC---CCATTTTTCTCTCCCTGGTTCTATCGACTCATAGTTTGGTAACTGTGTGATCTGAATCTCTCTTCTTCTGAAAAGCATTAGATAACGAAAAGAAATGCCAGGGCAACTTTATGAAAGAGAAATAGCATCCCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1474704 442 + 3644372 cTGCCTATTCTTATTATTA-ATGAAATAAT------AACAGAAAA--CAATAGG-AAAATGTTCTTCTCTGTTTCATATTTACCTTCCTCAGTTCATTTTCTGTGTGTTCTGC-TTTTTTAAAAAATGTGAACGTTCTTTTCTTCTTGGTTTTACATTTCACCTTTGAATTTCCTTTTGTGTTTTTTT-AGTTAATAGGTCCTCTTTGGTGCTTTTTGCAAAAACCTTTGATACATTAAAATAATAA---GTTGTGTTTAACGCGTCAGTAGAGCCACTGCTGTAACTTCTAGCCATATTTGAAAGATCCGCAGT------GGCCTGGA------AGGC---TCATTTTTCTCTCCCTGGTTCTATCGACTCATAGTTTGGTAAC--TGTGATCTGAATCTCTCTTCTTCTGAAAAGCATTAGATAACGAAAAGAAATGCCAGGGCAACTTTATGAAAGAGAAATAGCATCCCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1429150 455 - 10304083 cTGCCTATTCTTATTATTA-ATGAAATAATA---ACAACAGCAAA--CAATAGGAAAAATGTTCTTCTCTGTTTCATATTTACCTTCCTCAGTTCATTTTCTGTGTGTTCTGC-TTTTTTAAAAAATGTGAACGTTCTTTTCTTCTTGGTTTTACATTTCACTTTTGAATTTCCTTTTGTGTTTTTTTCAGTTAATGGGTCCTCTTTGGTGCTTTTTGCAAAAACCTTTGATACATTAAAATAATAA---GTTGTGTTAAACATGTCAATAGAGCCACTGCTGTAACTTCCAGCCATATCTGAAAGATCCGCAGT------GGCCTGGATCTTTCAGGC---TCATTTTTCTCTCCCTGGTTCTATCGACTCATAGTTCGGTAACTGTGTGATCTGAATCTCTCTTCTTCTGAAAAGCATTAGATAATGAAAAGAAATGCCAGGGCAACTTTATGAAAGAGAAACAGCATCCCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1506643 449 - 107702431 ctgcctattcttattatta-ATGAAATAATA---ACAACAGCAAA--CAATAGGAAAAGTGTTCTTCTCTGTTTCATATTTACCTTCCTCAGTTCATTTTCTGTGTGTTCTGCTTTTTTTTTAAAATGTGAACATTCTTTTCTTCTTGGTTTTACATTTCACCTTTGAATTTCCTTTTGTGTTTTTTT-AGTTAATAGGTCCTCTTTGGTGCTTTTTGCAAAAACCTTTGATACATTAAAATAATAA---GTTGTGTTTAACATGTCAATAGAGCCACTGCTGTAACTTCCAGCCATATTTGAAAGATCCGCAGT------GGCCTGGA------AGGC---TCATTTTGCTCTCCCTGGTTCTATCGACTCATAGTTTGGTAACTTTGTGATCTGAATCTCTCTTCTTCTGAAAAGCATTAGATAATGAAAAGAAATGCCAGGGCAACTTTATGAAAGAGAAACAGCATCCCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 994650 449 - 2200435 cTGCCTATTCTTATTATTA-ATGAAATAATA---ACAACAGCAAA--CAATAGGAAAAGTGTTCTTCTCTGTTTCATATTTACCTTCCTCAGTTCATTTTCTGTGTGTTCTGC-TTTTTTAAAAAATGTGAACATTCTTTTCTTCTTGGTTTTACATTTCACTTTTGAATTTCCTTTTGTGTTTTTTTCAGTTAATGGGTCCTCTTTGGTGCTTTTTGCAGAAACCTTTGATACATTAAAATAATAA---GTTGTGTTTAACGTGTCAGTAGAGCCACTGCTGTAACTTCCAGCCATATCTGCAAGATCCGCAGT------GGCCTGGA------AGGC---TCATTTTTCTCTCCCTGGTTCTATCGACTCATAGTTTGGTAACTGTGTGATCTGAATCTCTCTTCTTCTGAAAAGCATTAGATAATGAAAAGAAATGCCAGGGCAACTTTATGAAAGAGAAACAGCATCCCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1426929 448 - 13651311 cTGCCTATTCTTATTATTA-ATGAAATAATA---ACAGCAGCAAA--CAATAGGAAAAGTGTTCTTCTCTGTTTCATTTTTACCTTCCTCAGTTCATTTTCTGTGTGTTCTGC-TTTTTTTAAAAATGTGAACATTCTTTTCTTCTTGGTTTTACATTTCACTTTTGAATTTCCTTTTGTGTTTTTTC-AGTCAATAGGTCCTCTTTGGTGCTTTTTGCAAAAACCTTTGATACATTAAAATAATAA---GTTGTGTTTAACGTGTCAGTAGAGCCACTGCTGTAACTTCCAGCCATATTTGAAAGATCCGCAGT------GGCCTGGA------AGGC---TCATTTTTCTCTCCCTGGTTCTATCGACTTACAGTTTGGTAACTTTGTGATCTGAATCTCTCTTCTTCTGAAAAGCATTAGATAATGAAAAGAAATGCCAGGGCAACTTTATGAAAGAGAAATAGCATCCCC i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1767367 453 + 4416731 TTGTCCATTCTTCTCAATATGTAAAATAATAATCACAACAACAAAATCAATAGAGAAAGTACCTTTTAGTATTTTGCATTTACTGTCCCAAATCCATTTTCTGTGTTTTCTGC-TTTTTTA-----TGTTCACATTCTTTTCCTCTTGGTTTTACATTTCACTTTCAAATTTCTTTTTGTATTTTTTTCAATCAATAG--CTTCTTTGGTTCTTTTTACAAATACCTTTGAAACCTTAAAATAATAAGAGGCTGCATTTAATGTGTCAATAAAACCACCGCTGAGACTTTGAACTGTATTTGAAAGATCCATGGT------GACCTGGA------AAGACAGTCATTTTTCTCTCCCTGATTTTATTGATTCACAGTTTGGTAACTTTATGATCTGAATCTCTCTCCTTCTGAAAAGAATTAGATAATTCAAAGAAATGTCAGGGCAA-GTTAAAAAAAAAAAAAGTCATCTCC i dasNov3.JH576208 C 0 I 1845 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e calJac3.chr14 1426398 0 - 108792865 C a score=751685.000000 s hg38.chr2_KI270774v1_alt 162566 180 + 223625 CCCTCTATCA-CCCCTCAAACCCCCTacacacacac-acacaca-cacacacacacacacac--acacacacacacacacaca-----cacacacacacacGAGCCAGCCAGGGCCAGGCTAATGCACACATCAGCAAGAGACAGGAAAGGTCATCTCAGAGCCGGGAGTCACAGCTTTCTCCTCCATCT s panTro5.chr2A 1449288 152 + 111504155 CC--CCATCA-CCCCTCAAACCCCCT----------------------------acacacac--acacacacacacacacaca-----gacacacacacacGAGCCAGCCAGGGCCAGGCTAATGCACACATCAGCAAGACACAGGAAAGCTCAACTCAGAGCCGGGAGTCACAGCTTTCTCCTCCATCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1398284 143 + 114371477 CCC-CCATCA-CCCCTCAAACCCCCT----------------------------------------acacacacacacacaca-----gacacacacacacGAGCCAGCCAGGGCCAGGCTAATGCACACATCAGCAAGACACAGGAAAGCTCAACTCAGAGCCGGGAGTCACAGCTTTCTCCTCCATCT i panPan2.chr2A C 0 T 5 s gorGor5.CYUI01015607v1 1422593 174 + 1464242 CCT-CTATCA-CCCCTCAAACCCCTa-------cacaacacacaccacacacacacacacac--acacaaacacacacaaaca-----cacacacacacaTGAGCCAGCCAGGGCCAGGCTAATGCACACATCAGCAAGAGACAGGAAAGGTCAACTCAGAGCCGGGAGTCACAGCTTTCTCCTGCATCT i gorGor5.CYUI01015607v1 C 0 I 1 s nomLeu3.chr19 1145274 157 + 81552678 CCT-CTATCA-CCCCCCAAACCCCCT------------------------acacacacacac--acatacacacacacacaca-----cacatacacacacGAGCCAGCCAGGGCCAGGCTGATGCACACATCAGCAAGAGGCAGGAAGGCTCAACTCAGAGCTGGGAGTCACAGCTTTCTCCTCCATCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1474719 152 + 108979918 CTT-CTATTATTCCCCCAAACCCCCT--------------------------acacacacac--acacacacacacaca---------cacacacacacacGAGCTAGCCAGGGCCAGGATAATGCACACATCAGCAAGAGGCAAAAAGGCTCAACTCAGAGCTGGGAGTCACAGCTTTCTCCTCCATCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1447168 152 - 111193037 CTT-CTATTATTCCCCCAAACCCCCT--------------------------acacacacac--acacacacacacaca---------cacacacacacaTGAGCTAGCCAGGGCCAGGATAATGCACACATCAGCAAGAGGCAAAAAGGCTCAACTCAGAGCTGGGAGTCACAGCTTTCTCCTCCATCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1475146 160 + 3644372 CTT-CTATTATTCCCCCAAACCCCCT--------------------------acacacacac--acacacacacacacacacacacaccacacacacacacGAGCTAGCCAGGGCCAGGATAATGCACACATCAGCAAGAGGCAAAAAGGCTCAACTCAGAGCTGGGA-TCACAGCTTTCTCCTCCATCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1429605 155 - 10304083 CTT-CTATTATTCCCCCAAACCCCCT--------------------------acacacacac--acacacacacacacacaca-----cacacacacacacGAGCCAGCCGGGGCCAGGATAATG-ACACATCAGCAAGAGGCAGGAAGGCTCAACTCAGAGCTGGGAGTCACAGCTTTCTCCTCCATCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1507092 158 - 107702431 CTT-CTATTATTCCCCCAAACCCCCT--------------------------ACGcacacacatacacacacacacacacaca-----cacacacacacacGAGCCAGCTAGGGCCAGGATAATGCACACATCAGCAAGAGGCAAAAAGGCTCAACTCAGAGCTGGGAGTCACAGctttctcctccatct i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 995099 156 - 2200435 CTT-CTATTATTCCCCCAAACCCCCT--------------------------acacacacac--acacacacacacacacaca-----cacacacacacacGAGCCAGCCGGGGCCAGGATAATGCACACATCAGCAAGAGGCAGGAAGGCTCAACTCAGAGCTGGGAGTCGCAGCTTTCTCCTCCATCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1427377 160 - 13651311 CTT-CTATTATTCCCCCAAACCCCCT--------------------------AAacacacac--acacacacacacacacacacacg-cacacGCATACACAAGCCAGCCAGGGCCAGGATAATGCACACATCAGCAAGAGGCAGGAAGGCTCAGCTCAGAGCTGGGAGTCACAGCTTTCTCCTCCATCT i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C a score=95945.000000 s hg38.chr2_KI270774v1_alt 162746 21 + 223625 GTCCACACCACCTCCCTCCTC s panTro5.chr2A 1449440 21 + 111504155 GTCCACACCACCTCCCTCCTC i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1422768 21 + 1464242 TCCCACACCACCTCCCTCCTC i gorGor5.CYUI01015607v1 I 1 I 18 s nomLeu3.chr19 1145431 21 + 81552678 GTCCACACCACGTCCCTCCTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1474871 21 + 108979918 GTCCACACCACCTCCCGCCTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1447320 21 - 111193037 GTCCACACCACCTCCCGCCTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1475306 21 + 3644372 GTCCACACCACCTCCCGCCTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1429760 21 - 10304083 GTCCACACCACCTCCCGCCTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1507250 21 - 107702431 gtccacaccacctccttcctc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 995255 21 - 2200435 GTCCACACCACCTCCCGCCTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1427537 21 - 13651311 GTCCACATCACGTCCCTCCTC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e panPan2.chr2A 1398427 5 + 114371477 T a score=16848.000000 s hg38.chr2_KI270774v1_alt 162767 5 + 223625 CTTCA s panTro5.chr2A 1449461 5 + 111504155 CTGCA i panTro5.chr2A C 0 C 0 s nomLeu3.chr19 1145452 5 + 81552678 CTTCA i nomLeu3.chr19 C 0 I 84 s rheMac8.chr13 1474892 5 + 108979918 CTGCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1447341 5 - 111193037 CTGCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1475327 5 + 3644372 CTGCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1429781 5 - 10304083 CTGCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1507271 5 - 107702431 ctgca i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 995276 5 - 2200435 CTGCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1427558 5 - 13651311 CTCCA i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e gorGor5.CYUI01015607v1 1422789 18 + 1464242 I e panPan2.chr2A 1398427 5 + 114371477 T a score=13095.000000 s hg38.chr2_KI270774v1_alt 162772 3 + 223625 TCC s panTro5.chr2A 1449466 3 + 111504155 TCC i panTro5.chr2A C 0 C 0 s nomLeu3.chr19 1145541 3 + 81552678 TCC i nomLeu3.chr19 I 84 C 0 s rheMac8.chr13 1474897 3 + 108979918 TCC i rheMac8.chr13 C 0 T 40 s macFas5.chr13 1447346 3 - 111193037 TCC i macFas5.chr13 C 0 T 43 s macNem1.NW_012011978v1 1475332 3 + 3644372 TCC i macNem1.NW_012011978v1 C 0 T 40 s cerAty1.NW_012000820v1 1429786 3 - 10304083 TCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1507276 3 - 107702431 tcc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 995281 3 - 2200435 TCC i manLeu1.NW_012103754v1 C 0 T 40 s colAng1.NW_012118821v1 1427563 3 - 13651311 TCC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e gorGor5.CYUI01015607v1 1422789 18 + 1464242 I e panPan2.chr2A 1398427 5 + 114371477 T a score=4373.000000 s hg38.chr2_KI270774v1_alt 162775 9 + 223625 GTCCAAACC s panTro5.chr2A 1449469 9 + 111504155 GTCCAAACC i panTro5.chr2A C 0 C 0 s nomLeu3.chr19 1145544 9 + 81552678 GTCCACACC i nomLeu3.chr19 C 0 C 0 s colAng1.NW_012118821v1 1427566 9 - 13651311 GTCCACACC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 995284 40 - 2200435 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C e macNem1.NW_012011978v1 1475335 40 + 3644372 T e macFas5.chr13 1447349 43 - 111193037 T e rheMac8.chr13 1474900 40 + 108979918 T e gorGor5.CYUI01015607v1 1422789 18 + 1464242 I e panPan2.chr2A 1398427 5 + 114371477 T a score=747.000000 s hg38.chr2_KI270774v1_alt 162784 3 + 223625 ATG s panTro5.chr2A 1449478 3 + 111504155 ATG i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1422807 3 + 1464242 ACC i gorGor5.CYUI01015607v1 I 18 C 0 s nomLeu3.chr19 1145553 3 + 81552678 ACC i nomLeu3.chr19 C 0 C 0 s colAng1.NW_012118821v1 1427575 3 - 13651311 ATG i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 995284 40 - 2200435 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C e macNem1.NW_012011978v1 1475335 40 + 3644372 T e macFas5.chr13 1447349 43 - 111193037 T e rheMac8.chr13 1474900 40 + 108979918 T e panPan2.chr2A 1398427 5 + 114371477 T a score=8944.000000 s hg38.chr2_KI270774v1_alt 162787 12 + 223625 TTTCTCCTGCTG s panTro5.chr2A 1449481 12 + 111504155 TTTCTCCTGCTG i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1422810 12 + 1464242 TCCCTCCTCCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1145556 12 + 81552678 TCCCTCCTACTG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1447306 9 - 111193037 TTTCTC---CTC i macFas5.chr13 T 43 C 0 s colAng1.NW_012118821v1 1427578 12 - 13651311 TTTCTCCTGCTG i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 995284 40 - 2200435 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C e macNem1.NW_012011978v1 1475335 40 + 3644372 T e rheMac8.chr13 1474900 40 + 108979918 T e panPan2.chr2A 1398427 5 + 114371477 T a score=25516.000000 s hg38.chr2_KI270774v1_alt 162799 16 + 223625 CATCCGTCCACACCAC s panTro5.chr2A 1449493 16 + 111504155 CATCCATCCACACCAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1398422 16 + 114371477 CATCTGTCCACACCAC i panPan2.chr2A T 5 C 0 s gorGor5.CYUI01015607v1 1422822 16 + 1464242 CATCCGCCCACACCAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1145568 16 + 81552678 CGTCTGTCCTCACCAC i nomLeu3.chr19 C 0 T 58 s macFas5.chr13 1447315 16 - 111193037 CATCTGTCCACACCAC i macFas5.chr13 C 0 C 0 s colAng1.NW_012118821v1 1427590 16 - 13651311 CATCCATCCACAACAC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 995284 40 - 2200435 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C e macNem1.NW_012011978v1 1475335 40 + 3644372 T e rheMac8.chr13 1474900 40 + 108979918 T a score=29921.000000 s hg38.chr2_KI270774v1_alt 162815 18 + 223625 CTCCCTCCT-CCTTCATCC s panTro5.chr2A 1449509 18 + 111504155 CTCCCTCCT-CCTTCATCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1398438 18 + 114371477 CTCCCTCCT-CCTGCATCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1422838 19 + 1464242 CTCCCTCCTCCCTGCATCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1145526 18 + 81552678 CTCCCTCCT-CCTGCATCC i nomLeu3.chr19 T 58 C 0 s macFas5.chr13 1447331 18 - 111193037 CTCCCGCCT-CCTGCATCC i macFas5.chr13 C 0 C 0 s colAng1.NW_012118821v1 1427606 18 - 13651311 CTCCCTCCT-CTTGCATCC i colAng1.NW_012118821v1 C 0 T 92 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 995284 40 - 2200435 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C e macNem1.NW_012011978v1 1475335 40 + 3644372 T e rheMac8.chr13 1474900 40 + 108979918 T a score=25465.000000 s hg38.chr2_KI270774v1_alt 162833 24 + 223625 GTCCACACCACCTTCCTCCTGCTG s panTro5.chr2A 1449527 24 + 111504155 GTCCAAACTACCTCCCTCCTCCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1398456 24 + 114371477 GTCCAAACCATGTTTCTCCTGCTG i panPan2.chr2A C 0 T 58 s gorGor5.CYUI01015607v1 1422857 24 + 1464242 GTCCACACCACCTTCCTCCTGCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1145544 24 + 81552678 GTCCACACCACCTCCCTCCTACTG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1447349 24 - 111193037 GTCCACACCACGTCCCTGCTGCTG i macFas5.chr13 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e colAng1.NW_012118821v1 1427624 92 - 13651311 T e manLeu1.NW_012103754v1 995284 40 - 2200435 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C e macNem1.NW_012011978v1 1475335 40 + 3644372 T e rheMac8.chr13 1474900 40 + 108979918 T a score=14710.000000 s hg38.chr2_KI270774v1_alt 162857 9 + 223625 CATCCGTCC s panTro5.chr2A 1449551 9 + 111504155 CATCCGTCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1398422 9 + 114371477 CATCTGTCC i panPan2.chr2A T 58 C 0 s gorGor5.CYUI01015607v1 1422881 9 + 1464242 CATCCGTCC i gorGor5.CYUI01015607v1 C 0 I 27 s nomLeu3.chr19 1145568 9 + 81552678 CGTCTGTCC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1447373 9 - 111193037 TGTCTGTCC i macFas5.chr13 C 0 C 0 s colAng1.NW_012118821v1 1427532 9 - 13651311 CATCTGTCC i colAng1.NW_012118821v1 T 92 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 995284 40 - 2200435 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C e macNem1.NW_012011978v1 1475335 40 + 3644372 T e rheMac8.chr13 1474900 40 + 108979918 T a score=7728.000000 s hg38.chr2_KI270774v1_alt 162866 7 + 223625 ACACCAC s panTro5.chr2A 1449560 7 + 111504155 ACACCAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1398431 7 + 114371477 ACACCAC i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1145577 7 + 81552678 TCACCAC i nomLeu3.chr19 C 0 T 83 s macFas5.chr13 1447382 7 - 111193037 TCACCAC i macFas5.chr13 C 0 T 83 s colAng1.NW_012118821v1 1427541 7 - 13651311 ACATCAC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 995284 40 - 2200435 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C e macNem1.NW_012011978v1 1475335 40 + 3644372 T e rheMac8.chr13 1474900 40 + 108979918 T e gorGor5.CYUI01015607v1 1422890 27 + 1464242 I a score=7577.000000 s hg38.chr2_KI270774v1_alt 162873 17 + 223625 CTCCCTCCTCCTTCATC s panTro5.chr2A 1449567 17 + 111504155 CTCCCGCCTCCTGCATC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1398438 17 + 114371477 CTCCCTCCTCCTGCATC i panPan2.chr2A C 0 C 0 s colAng1.NW_012118821v1 1427548 17 - 13651311 GTCCCTCCTCCTCCATC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 995284 40 - 2200435 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C e macNem1.NW_012011978v1 1475335 40 + 3644372 T e macFas5.chr13 1447389 83 - 111193037 T e rheMac8.chr13 1474900 40 + 108979918 T e nomLeu3.chr19 1145584 83 + 81552678 T e gorGor5.CYUI01015607v1 1422890 27 + 1464242 I a score=8660.000000 s hg38.chr2_KI270774v1_alt 162890 13 + 223625 CGTCCAAACCATG s panTro5.chr2A 1449584 13 + 111504155 CATCCACACCACC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1398455 13 + 114371477 CGTCCAAACCATG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1422917 13 + 1464242 CGTCCACACCACC i gorGor5.CYUI01015607v1 I 27 C 0 s colAng1.NW_012118821v1 1427565 13 - 13651311 CGTCCACACCATG i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 995284 40 - 2200435 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C e macNem1.NW_012011978v1 1475335 40 + 3644372 T e macFas5.chr13 1447389 83 - 111193037 T e rheMac8.chr13 1474900 40 + 108979918 T e nomLeu3.chr19 1145584 83 + 81552678 T a score=42522.000000 s hg38.chr2_KI270774v1_alt 162903 31 + 223625 TTTCTCCTGCTGCATCCGTCCACACCACCTC s panTro5.chr2A 1449597 31 + 111504155 TCCCTCCTCCTGCATCCGTCCACACCACCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1398468 31 + 114371477 TTTCTCCTGCTGCATCCATCCATACCACCTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1422930 31 + 1464242 TTCCTCCTGCTGCATCCGTCCACACCACGTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1145501 28 + 81552678 ---TTTCTCCTCCATCTGTCCACACCACCTC i nomLeu3.chr19 T 83 T 29 s macFas5.chr13 1447306 28 - 111193037 TTTCTC---CTCCATCTGTCCACACCACCTC i macFas5.chr13 T 83 C 0 s colAng1.NW_012118821v1 1427578 31 - 13651311 TTTCTCCTGCTGCATCCATCCACAACACCTC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 995284 40 - 2200435 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C e macNem1.NW_012011978v1 1475335 40 + 3644372 T e rheMac8.chr13 1474900 40 + 108979918 T a score=3390.000000 s hg38.chr2_KI270774v1_alt 162934 4 + 223625 CCTC s panTro5.chr2A 1449628 4 + 111504155 CCGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1398499 4 + 114371477 CCTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1422961 4 + 1464242 CCTG i gorGor5.CYUI01015607v1 C 0 T 209 s nomLeu3.chr19 1145500 4 + 81552678 CTTT i nomLeu3.chr19 T 29 C 0 s macFas5.chr13 1447334 4 - 111193037 CCGC i macFas5.chr13 C 0 C 0 s colAng1.NW_012118821v1 1427609 4 - 13651311 CCTC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 995284 40 - 2200435 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C e macNem1.NW_012011978v1 1475335 40 + 3644372 T e rheMac8.chr13 1474900 40 + 108979918 T a score=47053.000000 s hg38.chr2_KI270774v1_alt 162938 28 + 223625 CTCCTGCATCCGT-CCACACCACCTCCCT s panTro5.chr2A 1449632 28 + 111504155 CTCCTGCATCCGT-CCACACCACCTCCCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1398503 28 + 114371477 CTCCTGCATCCGT-CCACACCACCTCCCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1422756 29 + 1464242 CTCCTGCATCTGTCCCACACCACCTCCCT i gorGor5.CYUI01015607v1 T 209 C 0 s nomLeu3.chr19 1145504 28 + 81552678 CTCCTCCATCTGT-CCACACCACCTCCCT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1447338 28 - 111193037 CTCCTGCATCCGT-CCACACCACGTCCCT i macFas5.chr13 C 0 C 0 s colAng1.NW_012118821v1 1427613 28 - 13651311 CTCTTGCATCCAT-CCATACCACGTCCCT i colAng1.NW_012118821v1 C 0 T 115 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 995284 40 - 2200435 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C e macNem1.NW_012011978v1 1475335 40 + 3644372 T e rheMac8.chr13 1474900 40 + 108979918 T a score=-1300.000000 s hg38.chr2_KI270774v1_alt 162966 1 + 223625 -C s panTro5.chr2A 1449660 1 + 111504155 -C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1398531 1 + 114371477 -C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1422785 1 + 1464242 -C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1145532 1 + 81552678 -C i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1447366 1 - 111193037 G- i macFas5.chr13 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e colAng1.NW_012118821v1 1427641 115 - 13651311 T e manLeu1.NW_012103754v1 995284 40 - 2200435 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C e macNem1.NW_012011978v1 1475335 40 + 3644372 T e rheMac8.chr13 1474900 40 + 108979918 T a score=16274.000000 s hg38.chr2_KI270774v1_alt 162967 11 + 223625 CTCCTGCATCC s panTro5.chr2A 1449661 11 + 111504155 CTCCTGCATCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1398532 11 + 114371477 CTCCTGTATCC i panPan2.chr2A C 0 T 116 s gorGor5.CYUI01015607v1 1422786 11 + 1464242 CTCCTGCATCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1145533 11 + 81552678 CTCCTGCATCC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1447367 11 - 111193037 CTGCTGTGTCT i macFas5.chr13 C 0 C 0 s colAng1.NW_012118821v1 1427526 11 - 13651311 CTCCTCCATCT i colAng1.NW_012118821v1 T 115 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 995284 40 - 2200435 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C e macNem1.NW_012011978v1 1475335 40 + 3644372 T e rheMac8.chr13 1474900 40 + 108979918 T a score=16176.000000 s hg38.chr2_KI270774v1_alt 162978 11 + 223625 GTCCACACC-AC s panTro5.chr2A 1449672 11 + 111504155 GTCCACACC-AC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1398427 11 + 114371477 GTCCACACC-AC i panPan2.chr2A T 116 C 0 s gorGor5.CYUI01015607v1 1422797 12 + 1464242 GCCCATACCAAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1145544 11 + 81552678 GTCCACACC-AC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1447378 11 - 111193037 GTCCTCACC-AC i macFas5.chr13 C 0 T 84 s colAng1.NW_012118821v1 1427537 11 - 13651311 GTCCACATC-AC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 995284 40 - 2200435 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C e macNem1.NW_012011978v1 1475335 40 + 3644372 T e rheMac8.chr13 1474900 40 + 108979918 T a score=9105.000000 s hg38.chr2_KI270774v1_alt 162989 7 + 223625 CTCCCTC s panTro5.chr2A 1449683 7 + 111504155 CTCCCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1398438 7 + 114371477 CTCCCTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1422809 7 + 1464242 CTCCCTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1145555 7 + 81552678 CTCCCTC i nomLeu3.chr19 C 0 T 65 s colAng1.NW_012118821v1 1427548 7 - 13651311 GTCCCTC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 995284 40 - 2200435 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C e macNem1.NW_012011978v1 1475335 40 + 3644372 T e macFas5.chr13 1447389 84 - 111193037 T e rheMac8.chr13 1474900 40 + 108979918 T a score=8192.000000 s hg38.chr2_KI270774v1_alt 162996 10 + 223625 CTCCTTCATC s panTro5.chr2A 1449690 10 + 111504155 ctcctgcatc i panTro5.chr2A C 0 I 11021 s panPan2.chr2A 1398445 10 + 114371477 CTCCTGCATC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1422816 10 + 1464242 CTCCTGCATC i gorGor5.CYUI01015607v1 C 0 C 0 s colAng1.NW_012118821v1 1427555 10 - 13651311 CTCCTCCATC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 995284 40 - 2200435 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C e macNem1.NW_012011978v1 1475335 40 + 3644372 T e macFas5.chr13 1447389 84 - 111193037 T e rheMac8.chr13 1474900 40 + 108979918 T e nomLeu3.chr19 1145562 65 + 81552678 T a score=14170.000000 s hg38.chr2_KI270774v1_alt 163006 22 + 223625 CGTCCAAACCATGTTTCTCCTG s panTro5.chr2A 110049215 22 - 111504155 CGTCCATACCACCTCCCTCCTC i panTro5.chr2A I 2550 C 0 s panPan2.chr2A 1398455 22 + 114371477 CGTCCAAACCATGTTTCTCCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1422826 22 + 1464242 CGCCCACACCACCTCCCTCCTC i gorGor5.CYUI01015607v1 C 0 T 59 s colAng1.NW_012118821v1 1427565 22 - 13651311 CGTCCACACCATGTTTCTCCTG i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 995284 40 - 2200435 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C e macNem1.NW_012011978v1 1475335 40 + 3644372 T e macFas5.chr13 1447389 84 - 111193037 T e rheMac8.chr13 1474900 40 + 108979918 T e nomLeu3.chr19 1145562 65 + 81552678 T a score=12508.000000 s hg38.chr2_KI270774v1_alt 163028 16 + 223625 CTGCATCCGTCCACAC s panTro5.chr2A 110049237 16 - 111504155 CTGCATCCGTCCATAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1398477 16 + 114371477 CTGCATCCATCCATAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1422789 16 + 1464242 CTGCATCCGCCCATAC i gorGor5.CYUI01015607v1 T 59 C 0 s colAng1.NW_012118821v1 1427587 16 - 13651311 CTGCATCCATCCACAA i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 995284 40 - 2200435 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C e macNem1.NW_012011978v1 1475335 40 + 3644372 T e macFas5.chr13 1447389 84 - 111193037 T e rheMac8.chr13 1474900 40 + 108979918 T e nomLeu3.chr19 1145562 65 + 81552678 T a score=34491.000000 s hg38.chr2_KI270774v1_alt 163044 35 + 223625 C-ACCTCCCTCCTCCTGCATCCGTCCACACCACCTC s panTro5.chr2A 110049253 35 - 111504155 C-ACCTCCCTCCTCCTGCATCCGTCCACACCACCTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1398493 35 + 114371477 C-ACCTCCCTCCTCCTGCATCCGTCCACACCACCTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1422805 36 + 1464242 CAACCTCCCTCCTCCTGCATCCGCCCACACCACCTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1145497 32 + 81552678 ----CAGCTTTCTCCTCCATCTGTCCACACCACCTC i nomLeu3.chr19 T 65 C 0 s colAng1.NW_012118821v1 1427603 35 - 13651311 -CACCTCCCTCCTCTTGCATCCATCCATACCACGTC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 995284 40 - 2200435 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C e macNem1.NW_012011978v1 1475335 40 + 3644372 T e macFas5.chr13 1447389 84 - 111193037 T e rheMac8.chr13 1474900 40 + 108979918 T a score=5325.000000 s hg38.chr2_KI270774v1_alt 163079 3 + 223625 CCT s panTro5.chr2A 110049288 3 - 111504155 CCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1398528 3 + 114371477 CCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1422841 3 + 1464242 CCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1145529 3 + 81552678 CCT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1447305 3 - 111193037 CTT i macFas5.chr13 T 84 C 0 s colAng1.NW_012118821v1 1427638 3 - 13651311 CCT i colAng1.NW_012118821v1 C 0 T 17 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e manLeu1.NW_012103754v1 995284 40 - 2200435 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C e macNem1.NW_012011978v1 1475335 40 + 3644372 T e rheMac8.chr13 1474900 40 + 108979918 T a score=845.000000 s hg38.chr2_KI270774v1_alt 163082 1 + 223625 C s panTro5.chr2A 110049291 1 - 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1398531 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1422844 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1145532 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1447308 1 - 111193037 T i macFas5.chr13 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e colAng1.NW_012118821v1 1427641 17 - 13651311 T e manLeu1.NW_012103754v1 995284 40 - 2200435 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C e macNem1.NW_012011978v1 1475335 40 + 3644372 T e rheMac8.chr13 1474900 40 + 108979918 T a score=149518.000000 s hg38.chr2_KI270774v1_alt 163083 55 + 223625 CT-CCTGCATCCGTCCACACCACCTTCCTCCTGCTGCATCCGT-CCACACCACGTCC s panTro5.chr2A 110049292 55 - 111504155 CT-GCTGCATCCGTCCATACCACCTCCCTCCTCCTGCATCTGT-CCATACCACCTCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1398532 55 + 114371477 CT-CCTGTATCCGTCCACACCACCTTCCTCCTGCTGCATCTGT-CCACACCATGTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1422845 57 + 1464242 CTCCCTGCATCCGTCCACACCACCTTCCTCCTGCTGCATCCGTCCCACACCACCTTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1145533 55 + 81552678 CT-CCTGCATCCGTCCACACCACCTCCCTCCTACTGCGTCTGT-CCTCACCACACCC i nomLeu3.chr19 C 0 T 29 s rheMac8.chr13 1474860 55 + 108979918 CT-CCTCCATCTGTCCACACCACCTCCCGCCTCCTGCATCCGT-CCACACCACGTCC i rheMac8.chr13 T 40 C 0 s macFas5.chr13 1447309 55 - 111193037 CT-CCTCCATCTGTCCACACCACCTCCCGCCTCCTGCATCCGT-CCACACCACGTCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1475295 55 + 3644372 CT-CCTCCATCTGTCCACACCACCTCCCGCCTCCTGCATCCGT-CCACACCACGTCC i macNem1.NW_012011978v1 T 40 C 0 s manLeu1.NW_012103754v1 995244 55 - 2200435 CT-CCTCCATCTGTCCACACCACCTCCCGCCTCCTGCATCCGT-CCACACCACGTCC i manLeu1.NW_012103754v1 T 40 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e colAng1.NW_012118821v1 1427641 17 - 13651311 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C a score=62752.000000 s hg38.chr2_KI270774v1_alt 163138 24 + 223625 CTGCTGCTGCGTC--TGTCCTCACCA s panTro5.chr2A 110049347 24 - 111504155 CTCCTCCTGTATC--CGTCCACACCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1398587 24 + 114371477 CTGCTGTTGCGTC--TGTCCTCACCA i panPan2.chr2A C 0 I 2013 s gorGor5.CYUI01015607v1 1422902 26 + 1464242 CTCCTGCTGCATCCGCGTCCACACCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1145559 24 + 81552678 CTCCTACTGCGTC--TGTCCTCACCA i nomLeu3.chr19 T 29 C 0 s rheMac8.chr13 1474915 24 + 108979918 CTGCTGCTGTGTC--TGTCCTCACCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1447364 24 - 111193037 CTGCTGCTGTGTC--TGTCCTCACCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1475350 24 + 3644372 CTGCTGCTGTGTC--TGTCCTCACCA i macNem1.NW_012011978v1 C 0 C 0 s manLeu1.NW_012103754v1 995299 24 - 2200435 CTGCTGCTGTGTC--TGTCCTCACCA i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e colAng1.NW_012118821v1 1427641 17 - 13651311 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C a score=2800.000000 s hg38.chr2_KI270774v1_alt 163162 1 + 223625 C s panTro5.chr2A 110049371 1 - 111504155 C i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1422928 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1145583 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1474939 1 + 108979918 C i rheMac8.chr13 C 0 T 40 s macFas5.chr13 1447388 1 - 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1475374 1 + 3644372 C i macNem1.NW_012011978v1 C 0 T 40 s manLeu1.NW_012103754v1 995323 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 T 40 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e colAng1.NW_012118821v1 1427641 17 - 13651311 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C e panPan2.chr2A 1398611 2013 + 114371477 I a score=815.000000 s hg38.chr2_KI270774v1_alt 163163 4 + 223625 GTCC s panTro5.chr2A 110049372 4 - 111504155 CTTC i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1422929 4 + 1464242 CTTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1145584 4 + 81552678 ACCC i nomLeu3.chr19 C 0 T 26 s macFas5.chr13 1447389 4 - 111193037 ACCC i macFas5.chr13 C 0 T 44 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e colAng1.NW_012118821v1 1427641 17 - 13651311 T e manLeu1.NW_012103754v1 995324 40 - 2200435 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C e macNem1.NW_012011978v1 1475375 40 + 3644372 T e rheMac8.chr13 1474940 40 + 108979918 T e panPan2.chr2A 1398611 2013 + 114371477 I a score=3100.000000 s hg38.chr2_KI270774v1_alt 163167 14 + 223625 CTGCTGCTGCGTCT s panTro5.chr2A 110049376 14 - 111504155 CTCCTGCTGCATCT i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1422933 14 + 1464242 CTCCTGCTGCATCC i gorGor5.CYUI01015607v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e colAng1.NW_012118821v1 1427641 17 - 13651311 T e manLeu1.NW_012103754v1 995324 40 - 2200435 T e chlSab2.chr14 1507279 0 - 107702431 C e cerAty1.NW_012000820v1 1429789 0 - 10304083 C e macNem1.NW_012011978v1 1475375 40 + 3644372 T e macFas5.chr13 1447393 44 - 111193037 T e rheMac8.chr13 1474940 40 + 108979918 T e nomLeu3.chr19 1145588 26 + 81552678 T e panPan2.chr2A 1398611 2013 + 114371477 I a score=73854.000000 s hg38.chr2_KI270774v1_alt 163181 18 + 223625 GTCCACACCACGTCCCTG s panTro5.chr2A 110049390 18 - 111504155 GTCCACACCATGTCCCTG i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1422947 18 + 1464242 GTCCACACCACGTCCCTG i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1474900 18 + 108979918 GTCCACACCACGTCCCTG i rheMac8.chr13 T 40 C 0 s macFas5.chr13 1447349 18 - 111193037 GTCCACACCACGTCCCTG i macFas5.chr13 T 44 C 0 s macNem1.NW_012011978v1 1475335 18 + 3644372 GTCCACACCACGTCCCTG i macNem1.NW_012011978v1 T 40 C 0 s cerAty1.NW_012000820v1 1429789 18 - 10304083 GTCCACACCACGTCCCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1507279 18 - 107702431 gtccACACCACATCCCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 995284 18 - 2200435 GTCCACACCACGTCCCTG i manLeu1.NW_012103754v1 T 40 C 0 s colAng1.NW_012118821v1 1427624 18 - 13651311 ATCCATACCACGTCCCTG i colAng1.NW_012118821v1 T 17 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e nomLeu3.chr19 1145588 26 + 81552678 T e panPan2.chr2A 1398611 2013 + 114371477 I a score=266305.000000 s hg38.chr2_KI270774v1_alt 163199 58 + 223625 CTGCTGCGTCTGTCCTCACCATACCCACTCTAATTTGTCAGGGCCCAACCACAGCCGC s panTro5.chr2A 110049408 58 - 111504155 CTGTTGCGTCTGTCCTCACCATACCCACTCTAATTTGTCAGGGCCCAACCACAGCCGC i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1422965 58 + 1464242 CTGCTGCGTCCGTCCTCACCATACCCACTCTAATTTGTCAGGGCCCAACCACAGCTGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1145562 58 + 81552678 CTACTGCGTCTGTCCTCACCACACCCACTCTAATTTGTCAGGGCCCAACCACAGCCAC i nomLeu3.chr19 T 26 C 0 s rheMac8.chr13 1474918 58 + 108979918 CTGCTGTGTCTGTCCTCACCACACCCACTCTAAGCTGTCAGAGCCCAACCCCAGCCAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1447367 58 - 111193037 CTGCTGTGTCTGTCCTCACCACACCCACTCTAAGCTGTCAGGGCCCAACCCCAGCCAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1475353 58 + 3644372 CTGCTGTGTCTGTCCTCACCACACCCACTCTAAGCTGTCAGGGTCCAACCCCAGCCAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1429807 56 - 10304083 CTGC--TGTCTGTCCTCACCACACCCACTCTAAGCTGTCAGGGCCCAACCCCAGCCAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1507297 58 - 107702431 CTGCTGTGTCTGTCCTCACCACACCCACTCTAAGCTGTCAGGGCCCAACCCCAGCCAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 995302 58 - 2200435 CTGCTGTGTCTGTCCTCACCACACCCACTCTAAGCTGTCAGGGCCCAACCCCAGCCAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1427642 58 - 13651311 CTGCTGTGTCTGTCCTCACCACACCCACTCTAAGCTGTCAGGGTCCAACCCCGGCCAC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e dasNov3.JH576208 1767820 1845 + 4416731 I e calJac3.chr14 1426398 0 - 108792865 C e panPan2.chr2A 1398611 2013 + 114371477 I a score=972432.000000 s hg38.chr2_KI270774v1_alt 163257 218 + 223625 CCCCACTCTGAGGATCTTGGCTCCTCTAATTTCTTTTGTCGAAAGCTGAGAGCTATCCCCT-CCCTCAGCCCTGGGCCACA-GGACTTCTGCTGTGGGCATGTTTGGGAGGGATCTGCAGGGCCGCCCTCTGTGCTGGTTCC--TGGGATCCGGCAT-----------------CTCTCGGGGGACTCGCACGTAGGAAGGGCTGATAAAGTTG-CTCTTGCTGGCTTGAGATCCCACAG-- s panTro5.chr2A 110049466 218 - 111504155 CCCCACTCTGAGGATCTTGGCTCCTCTAATTTCTTTTGTTGAAAGCTGAGAGCTATCCCCT-CCCTCAGCCCTGGGCCACA-GGACTTCTGCTGTGGGCATGTTTGGGAGGGATCTGCAGGGCCGCCCTCTGTGCTGGTTCC--TGGGACCCGGCAT-----------------CTCTCGGGGCACTCGCACGTAGGAAGGGCTCATAAAGTTG-CTCTTGCTGGCTTGAGATCCCACAG-- i panTro5.chr2A C 0 I 2868 s gorGor5.CYUI01015607v1 1423023 218 + 1464242 CCCCACTCTGAGGATCTTGGCTCCTCTAATTTCTTTTGTCGAAAGCTGAGAGCTATCCCCT-CCCTCAGCCCTGGGCCACA-GGACTTCTGCTGCGGGCATGTTTGGGAGGGATCTGCAGGGCCGCCCTCTGTGCTGGTTCC--TGGGATCCGGCGT-----------------CTCTCGGGGGACTCGCACGTAGGAAGGGCTGATAAAGTTG-CTCTTGCTTGCTTGAGATCCCACAG-- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1145620 213 + 81552678 CCCCACTCTGAGGATCTTGGCTCCTCTAATTTCTTCTGTAGAAAGCTGAGAGCTATCCCCT-CCCTCAGCCCTGGGCCACA-GGACTTCTGCTGTGGGCATCTTTGGGAGGGATCTGCAGGGCTGCCCTC--TGCTGGTTTC--TGGGATCCAGCAT-----------------CTCTCGGGGGACTTGCACGTAGGAAGGGCTGATAAAGT----TCTTGCTGGCTTGAGATCCCACAG-- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1474976 217 + 108979918 CCCCTGTCTGAGGATCTCGGCTCCTCTAATTTCTTTTGTAGACAGCTGAGAGCGATCCCCT-CCCTCAGCCCTGGGGCACA-GGACTTCTGCCGTGGGTGTCTTTGGGAGGCATCTGCA-GGCTGCCCTCTGTGCTGGTTCC--TGGGAGCCGGCAT-----------------CTCTTGGGGGACTCGCACATAGGAATGGCTGATGAAGTTG-CTCTTGCTGGCTTGAGATCCCACAG-- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1447425 217 - 111193037 CCCCTGTCTGAGGATCTCGGCTCCTCTAATTTATTTTGTAGACAGCTGAGAGCGATCCCCT-CCCTCAGCCCTGGGGCACA-GGACTTCTGCCGTGGGTGTCTTTGGGAGGCATCTGCA-GGCTGCCCTCTGTGCTGGTTCC--TGGGAGCCGGCAT-----------------CTCTTGGGGGACTCACACATAGGAAGGGCTGATGAAGTTG-CTCTTGCTGGCTTGAGATCCCACAG-- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1475411 217 + 3644372 CCTCTGTCTGAGGATCTCGGCTCCTCTAATTTCTTTTGTAGACAGCTGAGAGCGATCCCCT-CCCTCAGCCCTGGGGCACA-GGACTTCTGCCGTGGGTGTCTTTGGGAGGCATCTGCA-GGCTGCCCTCTGTGCTGGTTCC--TGGGAGCCGGCAT-----------------CTCTTGGGGGACTCACACATAGGAAGGGCTGATGAAGTTG-CTCTTGCTAGCTTGAGATCCCACAG-- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1429863 204 - 10304083 CCCCTGTCTGAGGATCTCGGCTCCTCTGATTTCTTTTGTAGACAGCTGAGAGCGATCCCCT-CCCTCAGCCCTGGGGCACA-GGACTTCTGCCGTG-------------CGCATCTGCG-GGCTGCCCTCTGTGCTGGTTCC--TGGGAGCCGGCAT-----------------CTCTCGGGGGACTCGCACATAGGAAGGGCTGATGAAGTTG-CTCTTGCTGGCTTGAGATCCCACAG-- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1507355 203 - 107702431 CC-CCGTCTGAGGATCTTGGCTCCTCTAATTTCTTTTGTAGACAGCCGAGAGCAATCCCCT-CCCTCAGCCCTGGGGCACA-GGACTTCTGCCGTG-------------CGCATCTGCA-GGCTGCCCTCTGTGCTGGTTCC--TGGGAGCCAGCAT-----------------CTCTTGGGGGACTCGCACATAGGAAGGGCTGATGAAGTTG-CTCTTGCTGGCTTGAGATCCCACAG-- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 995360 217 - 2200435 CCGCTGTCTGAGGATCTCGGCTCCTCTGATTTCTTTTGTAGACAGCTGAGAGCGACCCCCT-CCCTCAGCCCTGGGGCACA-GGACTTCTGCCGTGGGTGTATTTGGGAGGCATCTGCG-GGCTGCCCTCTGTGCTGGTTCC--TGGGAGCCGGCAT-----------------CTCTCGGGGGACTCGCACATAGGAAGGGCTGATGAAGTTG-CTCTTGCTGGCTTGAGATCCCACAG-- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1427700 217 - 13651311 CCCCTGTCTGAGGATCTTGGCTCCTCTAATTTCTTTTGTAGACAGCTGAGAGCGATCCCCT-CCCTCGGCCCTGGGGCACA-GGACTTCTGCCGTGGGTGTCTTTGGGAGGCATCTGCA-GGCCGCCCTCTGTGCTGGTTCC--TGGGAGCCGACAT-----------------CTCTCAGGGGACTCACACATAGGAAGGGCTGATGAAGTTG-CTCTTGCTGGCTTGACATCCCACAG-- i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1769665 231 + 4416731 CCCCGCCCTGAGGATCTATACTCTTCTGATATCTTAGGCAGAGGTCTGATTGAGATAGCATGCCTTTGGTCCTAGGATAGATAGCCTTCTACTCCTATCTTTTT--------ACCTT---GGTCTCTGACTGTGCTGATTTCCTTGAAGGCAgacataatggccatgcagtatccttcacagtgactggcatatgggaaggctcagagaaatagtctctTTCTGGTTTACGATCCCAAAAGG i dasNov3.JH576208 I 1845 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e calJac3.chr14 1426398 0 - 108792865 C e panPan2.chr2A 1398611 2013 + 114371477 I a score=241707.000000 s hg38.chr2_KI270774v1_alt 163475 49 + 223625 GACCCTGGATCCATAAGCCCTGCTTCCCACCA-GGAGGAACTGAAGCTCT s panTro5.chr2A 1460721 49 + 111504155 GACCCTGCTTCCATAAGCCCTGCTTCCCACCA-GGAGGAACTGAAGCTCT i panTro5.chr2A I 11021 C 0 s gorGor5.CYUI01015607v1 1423241 49 + 1464242 GACACCGGTTCCATAAGACCTGCTTCCCACCA-GGAGGAACTGAAGCTCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1145833 49 + 81552678 GACCCCGGTTCCATAAGCCCTGCTTCCCACCA-GGAGGGACCGAAGCTCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1475193 49 + 108979918 GACCCCAGTTCCATAAGCCGTGCTTCCCGCCA-GGAGGAACCGAAGCTCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1447642 49 - 111193037 GACCCCAGTTCCATAAGCCGTGCTTCCCGCCA-GGAGGAACCGAAGCTCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1475628 49 + 3644372 GACCCCAGTTCCATAAGCCGTGCTTCCCGCCA-GGAGGAACCGAAGCTCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1430067 49 - 10304083 GACCCCAGTTCCATAAGCCGTGCTTCCCGCCA-GGAGGAACCGAAGCTCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1507558 49 - 107702431 GACCCCGGTTCCATAAGCCGTGCTTCCTGCCA-GGAGGAACCAAAGCTCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 995577 49 - 2200435 GACCCCAGTTCCATAAGCCGTGCTTCCCGCCA-GGAGGAACCGAAGCTCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1427917 49 - 13651311 GACCCCGATTCCATAAGCCGTGCTTCCTGCCA-GGAGGAACCAAAGCTCT i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1769896 50 + 4416731 GTTTCCTACTCCATAAACCATACATCCTGTGATAAAAGAACTGAAGTTCT i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e saiBol1.JH378218 1255267 0 - 7082604 C e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e calJac3.chr14 1426398 0 - 108792865 C e panPan2.chr2A 1398611 2013 + 114371477 I a score=166014.000000 s hg38.chr2_KI270774v1_alt 163524 34 + 223625 TGCTCTT----CAATCCCAGAAAACCCTAGCTGCTTTA s panTro5.chr2A 1460770 33 + 111504155 TGCTCTT----CAATCCCAGAAA-CCCTAGCTGCTTTA i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1423290 34 + 1464242 TGCTCTT----CAATCCCAGAAAACCCTCGCTGCTTTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1145882 34 + 81552678 TGCCCTT----CAATCCCAGCAAACCCTAGCTGCTCTA i nomLeu3.chr19 C 0 I 1 s rheMac8.chr13 1475242 34 + 108979918 TGCTCTT----CCATCCCAGCAGTCCTCAGCTGCTCTA i rheMac8.chr13 C 0 I 1 s macFas5.chr13 1447691 34 - 111193037 TGCTCTT----CCATCCCAGCAGTCCTCAGCTGCTCTA i macFas5.chr13 C 0 I 1 s macNem1.NW_012011978v1 1475677 34 + 3644372 TGCTCTT----CCATCCCAGCAGTCCTCAGCTGCTCTA i macNem1.NW_012011978v1 C 0 I 1 s cerAty1.NW_012000820v1 1430116 34 - 10304083 TGCTCTT----CCATCCCAGCAGTCCTCAGCTTCTCTA i cerAty1.NW_012000820v1 C 0 I 1 s chlSab2.chr14 1507607 34 - 107702431 TGCTCTT----CCATCCCAGCAGTCCTCAGCGGCTCTG i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012103754v1 995626 34 - 2200435 TGCTCTT----CCATCCCAGCAGTCCTCAGCTGCTCTA i manLeu1.NW_012103754v1 C 0 I 1 s colAng1.NW_012118821v1 1427966 34 - 13651311 TGCTCTT----CCATCCCTGCAGTCCTCAGCTGCTCTA i colAng1.NW_012118821v1 C 0 I 1 s calJac3.chr14 1426398 33 - 108792865 TGCCCTT----CAATCTCA-CAATCCCTGGCTGCTCTG i calJac3.chr14 C 0 I 1 s saiBol1.JH378218 1255267 32 - 7082604 TGCCCTT----CAATCTCA-CAATCCC-GGCTGCTCTG i saiBol1.JH378218 C 0 I 1 s dasNov3.JH576208 1769946 37 + 4416731 CACTTTTATAGCAATCACAGTATTACCCTA-TACTTTA i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e cebCap1.NW_016107827v1 1348929 68 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e panPan2.chr2A 1398611 2013 + 114371477 I a score=181370.000000 s hg38.chr2_KI270774v1_alt 163558 27 + 223625 GGTGTGTCATAAGACAAGAACTCACAA s panTro5.chr2A 1460803 27 + 111504155 GTTGTGTCATAAGACAAGAACTCACAA i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1423324 26 + 1464242 G-TGTGTCATAAGACAAGAACTCACAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1145917 27 + 81552678 GGTGTGTCATAAAACAAGAACTCACAA i nomLeu3.chr19 I 1 C 0 s rheMac8.chr13 1475277 27 + 108979918 GGTGTGTCATAAAACAAGAACTCACAA i rheMac8.chr13 I 1 C 0 s macFas5.chr13 1447726 27 - 111193037 GGTGTGTCATAAAACAAGAACTCACAA i macFas5.chr13 I 1 C 0 s macNem1.NW_012011978v1 1475712 27 + 3644372 GGTGTGTCATAAAACAAGAACTCACAA i macNem1.NW_012011978v1 I 1 C 0 s cerAty1.NW_012000820v1 1430151 27 - 10304083 GGTGTGTCATAAAACAAGAACTGACAA i cerAty1.NW_012000820v1 I 1 C 0 s chlSab2.chr14 1507642 27 - 107702431 GGTGTGTCATAAAACAAGAACTCACAA i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012103754v1 995661 27 - 2200435 GGTGTGTCATAAAACAAGAACTCACAA i manLeu1.NW_012103754v1 I 1 C 0 s colAng1.NW_012118821v1 1428001 27 - 13651311 GGTGTGTCATAAAACAAGAACTCACAA i colAng1.NW_012118821v1 I 1 C 0 s calJac3.chr14 1426432 25 - 108792865 GGTGTGTCATGAAACAAGAACGCAC-- i calJac3.chr14 I 1 C 0 s saiBol1.JH378218 1255300 25 - 7082604 GGTGTGTCATGAAACAAGAACGCAG-- i saiBol1.JH378218 I 1 C 0 s cebCap1.NW_016107827v1 1348997 25 + 1864846 GGTGCGTCATGAGACAAGAACGCAG-- i cebCap1.NW_016107827v1 I 68 C 0 s dasNov3.JH576208 1769983 21 + 4416731 ------CTATAAAACAAGACTATAGAA i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 167715 78 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e otoGar3.GL873658 947316 10 + 5252280 I e panPan2.chr2A 1398611 2013 + 114371477 I a score=3644491.000000 s hg38.chr2_KI270774v1_alt 163585 519 + 223625 TCAGTTGCTCACTTTGGTGAT-AACTTTTGTGTTCTACAGACAAGAAAAGAATGAGAAAGGAAACCCTT-CCCAGC-ACA--------------------------------------GGTGTGAGGGA-GGCAG-AGAGGAGGTAGCCATCCTCGGGGAGTCTGGGTGTGCCATCCAGGCAGCATGGAGTTTGGGTTCCACAGGGTGAAAAGATAAAG---ACATCCCAAATATCTGGCGTGGATGTTTTCTATGCCCCGGC---------CATCAGATAGCAGA-CCTA---TTTCTGGAGCACAGCCTTGATTTCCCCAGATATCCAGGGACCCACAGAA------GCTTTGCTTTGGA--TGTGTGTGGAGGTAGAACCAGACCCCGGAGGG-ACTGCAGATCTCCCTGG--ACATCCCCATCCCGGGCAGGCAGATCCATGTCTCGGGGCAGGGG---CTGCATCCCTGGG----------CC------------ACTCGGCTGCTGACCTTTGCTGTAGC-TGAGTA--CTTTTTCAGATTGGTTGCTCTTCCAGAGCAAAGGAGCAGATGGATAAAGTCATGCT-----TCCAAGGCTGGAAAGAAA---GAGAAAGG s panTro5.chr2A 1460830 513 + 111504155 TCAGTTGCTCACTTTGGTGAT-AACTTTTGTGTTCTACAGACAAGAAA-GAATGAGAAAGGAAACCCTT-CCCAGCCACA--------------------------------------GGTGTGAGGGA-GGCAG-AGAGGAGGTAGCCATCCTCGGG-AGTCTGG-TGTGCCATCCAGGCAGCATGGAGTTTGG-TTCCACAGGGTGAAAAGATAAAG---ACATCCCAAATATCTGG-GTGGATGTTTTCTATGCCCGG-----------CATCAGATAGCAGA-CCTA---TTTCTGGAGCACAGCCTTGATTTCCCCAGATATCCAGGGACCCACAGAA------GCTTTGCTTTGGA--TGTGTGTGGAGGTAGAACCAGACCCTGGAGGGGACTGCAGATCTCCCTGG--ACATCCCCATCCCGGGCAGGCAGATCCATGTCTCGGGGCAGGGG---CTGCATCCCTGGG----------CC------------ACTCAGCTGCTGACCTTTGCTGTAGCCTGAGTA--CTTTTTCAGATTGGTTGCTCTTCCAGAGCAAAGGAGCAGGTGGATAAAGCCATGCT-----TCCAAGGCTG-AAAGAAA---GAGAA-GG i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1423350 519 + 1464242 TCAGTTGCTCACTTTGGTGAT-AACTTTTGTGTTCTACAGACAAGAAAAGAATGAGAAAGGAAACCCTTCCCCAGC-ACA--------------------------------------GGTGTGAGGGA-GGCAG-AGAGGAGGTAGCCATCCTCGGGGAGTCTGGGTGTGCCAT-CAGGCAGCATGGAGTTTGGGTTCCACAGGGTGAAAAGATAAAG---ACATCCCAAATATCTGGCGTGGATGTTTTCTATGCCCCAGC---------CATCGGATAGCAGA-CCTA---TTTCTGGAGCACAGCCTTGATTTCCCCAGATATCCAGGGACCCACAGAA------GCTTTGCTTTGGA--TGTGTGTGGAGGTAGAACCAGACCCCGGAGGG-ACTGCAGATCTCCCTGG--ACATCCCCATCCCGAGCAGGCAGATCCATGTCTCGGGGCAGGGG---CTGCATCCCTGGG----------CC------------ACTCGGCTGCTGACCTTTGCTGTAGC-TGAGTA--CTTTTTCAGATTGGTTGCTCTTCCAGAGCAAAGGAGCAGATGGATAAAGCCATGCT-----TCCAAGGCTGGAAAGAAA---GAGAAAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1145944 540 + 81552678 TCAGTTGCTCACTTTGGTGAT-AACTTTTGTGTTCTGCAGACAAGAAAAGAATGAGAAAGGAAACCCTT-CCCAGC-ACAGGTTGAGGGAGGCAGAGAGGAGGCAGCCATCCTCGGGGGGTGTGAGGGA-GGCAG-AGAGGAGGCGGCCATCCTCGGGGAGCCTGGGTGTGCCATCCAGGCAGCATGGAGTTT-----------------AAGATAAAG---ACATCCCAAACATCTGGCGTGGATGTTTTCTATGCCCTGGC---------CATCAGATAGCAGA-CCTA---TTTCTGGAGCACAGCCTTGATTTCCCCAGATATCCAGGGACCCACAGAA------GCTTTGCTTTGGA--TGTGTGTGGAGGTAGAACCAGACCCCGGAGGG-ACTGCAGATCTCCCTGG--ACATCCCCATCCTGGGCAGGCAGATCCACGTCTCGGGGCAGGGG---CTGCATCCCCGGG----------CC------------ACTCGGCTGCCGACCTTTGCTGTAGC-TGAGTA--CTTTTTCAGATTGGTTGCTCTTCCAGAGCAAAGGAGCAGATGGATAAAGCCATGCT-----TCCAAGGCTGGAAAGAAA---GAGAAAGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1475304 497 + 108979918 TCAGATGCTCACTTTGGCGAT-AACTTTTGTGTTCTACAGACAAGAAAAGAATGAGAAAGGAAACCCTT-CCCAGC-ACA--------------------------------------GGT-TGAGGGA-GGCAG-AGAGGAGGTAGCCATCCTTGGTGAGTCTGGGTGTGCCGTCCAGGCTGTGTGGAGTTT-----------------GAGATAAAG---A---CCCAAACATCTGGCGTGGGTGTTTTCTATGCCCCGGC---------CATCAGATAGCAGA-CCTG---GTTCTGGAGCACAGCCTTGATTTCCCCAGATATCCAGGGACCCACAGAA------GCTTTGCTTTGGA--TGTGTGTGGAGGTACGACCAGACCCCGGAGGG-ACCGCAGATCTCCCCGG--ACATCCCCATCCTAGGCAGGTGGATCCACGTCTCAGGGCAGGGG---CTGCATCCCCGGG----------CC------------ACTCGGCTGCTGACCTTTGCTGTGGC-TGAGTA--CTTTTTCAGATTGGCTGCTCTTCTAG-GCAAAGGAGCAGATGGATAAAGCCATGCT-----TCCAAGGCTGGAAAGAAA---GAAAAAGG i rheMac8.chr13 C 0 I 134 s macFas5.chr13 1447753 495 - 111193037 TCAGATGCTCACTTTGGCGAT-AACTTTTGTGTTCTACAGACAAGAAAAGAATGAGAAAGGAAACCCTT-CCCAGC-ACA--------------------------------------GGT-TGAGGGA-GGCAG-AGAGGAGGTAGCCATCCTTGTTGAGTCTGGGTGTGCCGTCCAGGCTGTGTGGAGTTT-----------------GAGATAAAG---A---CCC-AACATCTGGCGTGGGTGTTTTCTATGCCCCGGC---------CATCAGATAGCAGA-CCTG---GTTCTGGAGCACAGCCTTGATTTCCCCAGATATCCAGGGACCCACAGAA------GCTTTGCTTTGGA--TGTGTGTGGAGGTACGACCAGACCCCGGAGGG-ACCGCAGATCTCCCCGG--ACATCCCCATCCTAGGCAGGCGGATCCACGTCTCAGGGCAGGGG---CTGCATCCCCGGG----------CC------------ACTCGGCTGCTGACCTTTGCTGTGGC-TGAGTA--CTTTTTCAGATTGGCTGCTCTTCTAG-GCAAAGGAGCAGATGGATAAAGCCATGCT-----TCCAAGGCTGGAAAGAAA---GAAAAAG- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1475739 497 + 3644372 TCAGATGCTCACTTTGGCGAT-AACTTTTGTGTTCTACAGACAAGAAAAGAATGAGAAAGGAAACCCTT-CCCAGC-ACA--------------------------------------GGT-TGAGGGA-GGCAG-AGAGGAGGTAGCCATCCTTGGTGAGTCTGGGTGTGCCGTCCAGGCTGTGTGGAGTTT-----------------GAGATAAAG---A---CCCAAACATCTGGCATGGGTGTTTTCTATGCCCCGGC---------CATCAGATAGCAGA-CCTG---GTTCTGGAGCACAGCCTTGATTTCCCCAGATATCCAGGGACCCACAGAA------GCTTTGCTTTGGA--TGTGTGTGGAGGTACGACCAGACCCCGGAGGG-ACCGCAGATCTCCCCGG--ACATCCCCATCCTAGGCAGGCGGATCCACGTCTCAGGGCAGGGG---CTGCATCCCCGGG----------CC------------ACTCGGCTGCTGACCTTTGCTGTGGC-TGAGTA--CTTTTTCAGATTGGCTGCTCTTCTAG-GCAAAGGAGCAGATGGATAAAGCCATGCT-----TCCAAGGCTGGAAAGAAA---GAAAAAGG i macNem1.NW_012011978v1 C 0 I 134 s cerAty1.NW_012000820v1 1430178 497 - 10304083 TCAGATGCTCACTTTGGCGAT-AACTTTTGTGTTCTACAGACAAGAAAAGAATGAGAAAGGAAACCCTT-CCCAGC-AGA--------------------------------------GGT-TGAGGGA-GGCAG-AGAGGAGGTAGCCATCCTTGGTGAGTCTGGGTGTGCCGTCCAGGCTGCGTGGAGTTT-----------------GAGATAAAG---A---CCCAAACATCTGGCGTGGGTGTTTTCTATGCCCCGGC---------CATCAGATAGCAGA-CCTA---GTTCTGGAGCACAGCCTTGATTTCCCCAGATATCCAGGGACCCACAGAA------GCTTTGCTTTGGA--TGTGTGTGGAGGTACGACCAGACCCCGGAGGG-ACCGCAGATCTCCCCGG--ACATCCCCATCCTAGGCAGGCGGATCCACGTCTCAGGGCAGGGG---CTGCATCCCCGGA----------CC------------ACTCAGCTGCTGACCTTTGCCGTGGC-TGAGTA--CTTTTTCAGATTGGCTGCTCTTCCAG-GCAAAGGAGCAGATGGATAAAGCCATGCT-----TCCAAGGCTGGAAAGAAA---GAGAAAGG i cerAty1.NW_012000820v1 C 0 I 134 s chlSab2.chr14 1507669 501 - 107702431 TCAGATGCTCACTTTGGCGAT-AACTTTTGTGTTCTACAGACAAGAAAAGAATGAGAAAGGAAACCCTT-CCCAGC-ACA--------------------------------------GGT-TGAGGGA-GGCAG-AGAGGAGGTAGCCATCCTTGGTGAGTCTGGGTGTGCCATCCAGGCTGCATAGAGTTT-----------------GAGATAAAGACAA---CCCAAACATCTGGCGTGGGTGTTTTCTTTGCCCCAGC---------CATCAGATAGCAGA-CCTA---TTTCTGGAGCACAGCCATGATTTCCCCAGATATCCAGGGACCCACAGAA------GCTTTGCTTTGGA--TGTGCGTGGAGGTACGACCAGACCCCGGAGGG-ACCGCAGATCTCCCCGG--ACATCCCCATCCTAGGCAGGTGGATCCACATCTCAGGGCAGGGG---CTGCATCCCCGGA----------CC------------ACTCGGCTGCTGACCTTTGCTGTGGC-TGAGTA--CTTTTTCAGATTGGCTGCCCTTCCAGAGCAAAGGAGCAGATGGATAAAGCCATGCT-----TCCAAGGCTGGAAAGAAA---GAGAAAGG i chlSab2.chr14 C 0 I 134 s manLeu1.NW_012103754v1 995688 497 - 2200435 TCAGATGCTCACTTTGGCGAT-AACTTTTGTGTTCTACAGACGAGAAAAGAATGAGAAAGGAAACCCTT-CCCAGC-ACA--------------------------------------GGT-TGAGGGA-GGCAG-AGAGGAGGTAGCCATCCTTGGTGAGTCTGGGTGTGCCGTCCAGGCTGCGTGGAGTTT-----------------GAGATAAAG---A---CCCAAACATCTGGCGTGGGTGTTTTCTATGCCCCGGC---------CATCAGATAGCAGA-CCTG---GTTCTGGAGCACAGCCTTGATTTCCCCAGATATCCAGGGACCCACAGAA------GCTTTGCTTTGGA--TGTGTGTGGAGGTACGACCAGACCCCGGAGGG-ACCGCAGATCTCCCCAG--ACATCCCCATCCTAGGCAGGCGGATCCACGTCTCAGGGCAGGGG---CTGCATCCCCGGG----------CC------------ACTCAGCTGCTGACCTTTGCCGTGGC-TGAGTA--CTTTTTCAGATTGGCTGCTCTTCCAG-GCAAAGGAGCAGATGGATAAAGCCATGCT-----TCCAAGGCTGGAAAGAAA---GAGAAAGG i manLeu1.NW_012103754v1 C 0 I 133 s colAng1.NW_012118821v1 1428028 500 - 13651311 TCAGATGCTCACTTTGGCGAT-AACTTTTGTGTTCTATAGACAAGAAAAGAATGAGAAAGGAAACCCTT-CCCAGC-ACA--------------------------------------GGT-TGAGGGA-GGCAG-AGAGGAGGTAGCCATTCTTGGTGAGTCTGGGTGTGCCATCTAAGCTGCATGGAGTTT-----------------AAGATAAAG---ACATCCCAAACATCTGACGTGGGTGTTTTCTATGCCCCGGC---------CATCAGATAGGAGG-CCTA---TTTCTGGAGCACAGCCTTGACTTCCCCAGATATCCAGGGACCCACAGAA------GCTCTGCTTTGGA--TGTGTG-GGAAGTACGACCAGACCCCGGAGGG-ACCGCAGATCTCCCCGG--ACATCCCCATCCTAGGCAGGCGGATCCACGTCTCAGGGCAGGGG---CTGCATCCCCAGG----------CC------------ACTCAGCTGCTGACCTTTGCTGTAGC-TGAGTA--CTTTTTCAGATTGGCTGCTCTTCCAGAGCAAAGGAGCAGATGGATAAAGCCATGCT-----TCCATGGCTGGAAAGAAA---GAGAAAGG i colAng1.NW_012118821v1 C 0 I 134 s calJac3.chr14 1426457 461 - 108792865 TCAGGTGCTCACTTCGGTGGG-ATCTTTTGTGTCCTATAGACA--ACAAGAATGAGAAAGGACACCCTT-CCCAGC-ACA--------------------------------------GGCGTGAGG---GGCAG-AGGGGAGGTGGCCAGCCCTGGGGAGTGTGGGTG-GCCGTCCAGGCAGCATGGAGTTG-GGATCCACAGGGT-AAAAAACAAAG---ACG-CCCAAACATCTGGCTCGGATGACCCCTATGCCCCGGC---------CACCAGCTAGCAGA--------------------------------CCCAGGTGTCCAGGGA-CCACAGAA------CCTTTGCTCTGGA--TGCGTGTGGAGGCAGGACCAGCCCCTGGAGGA-ACTGCAGGCCTCCCTGG--GCATCCCCATCCTAGG-AGGCAGGTCCACATCTC-GGGCAGGGC---CTGCATCCTCAG-----------CC------------ACTCGGCTGCTGACCTTCGCTGTAGC-TCAATC--CTGTTCCAGA-----------------GCCAAGGAGCAGATAGGTAAAGCCATGCT-----TCCCAGGCTGG-AAGAAA---GAGAAAGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1255325 466 - 7082604 TCAGGTGCTCACTTTGGTGGG-AACTTTTGTGTCCTACAGACAAGACAAGAATGAGAAAGGACACCCTT-CCCCGC-ACA--------------------------------------GGCGTGAGG---GGCAGAAGGGAAGGTGGCCATCCCTGGGGAGTGTGGGTG-G-CATCCAGGCAGCATGGAGTTG-GTCACCACAGGGTGAAAAGATAAAG---ATGTCCCACACATCTGGCTCGGATG-TTCCTATGCCCCGGC---------CATCAGCTAGCAGA--------------------------------CCCAGATGTGCAGGGACCCACAGAA------CCTTTGCTTTGGA--CGCGTGTGGAGGCAGGGCCAGCCCCTGGAGGA-ACTGCAGGCCTCCTCGG--GCATCCCCATCCTAGG-AGGCAGGTTCACATCTC-GGACTGGAC---CTGCATCCTCGG-----------CC------------ACTCAGCTGCGGACCTTCGCTATAGC-TCAGTA--CTTTTCCAGA-----------------GCAAAGGAGCAGATAGATAAAGCTATGCT-----TCCCAGGCTGGAAAGAAA---CAGAAAGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1349022 472 + 1864846 TCAGGTGCTTACTTTGGCGGG-AACTTTTGTGTCCTACAGACAAGACAAGAATGAGAAAGGACACCCTT-CCCAGC-ACA--------------------------------------GGCGTGAGG---GGCAC-AGGGAAGGTGGCCTGCCCTGGGGAGTGTGGGTG-G-CGTCCAGGCAGCATGGACTTG-GGCTCCACAGGGTGAAAAGATAAAG---ACGCCCCAAACATCTGGCTTGGACGTTCCCTATGCCCTGGC---------CGTCAGCCAGCAGA--------------------------------CCCAGATGTCCAGGGACCCACAGAAAGTCACCCTTTGCTTTGGC--CACATGTGGAGGCAGGGCCAGCCGCTGGAGGA-ACCGCAGGCCTCCTCGG--GCATCCCCATCCTAGG-AGGCAGGTCCACATCTC-GGGCAGGGC---CTGCATCCTCGG-----------CC------------GCTCGGCTGCTGGCCTTCGCTGTAGC-TCAGTA--CTTTTCCAGA-----------------GCAAAGGAGCAGATAGATAAAGCCATGCT-----TCCCAGGCTGGAAAGAAA---GAGAAAGG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 167793 455 + 287728 TCAGGTGCTCACTCTGGCGGG-AACTTTTGTGTCCTACCGTCCAGACAAGAATGAGAAAGGACACCCTT-CCCAGC-ACA--------------------------------------GGCGTGAGG---GGCAG-AGGGAAGGTGGCCAGCCCTGGGGAGTGTGGGTG-GCCATCCAGGCAGCGTGGAGTTG-GGCTCCACAGGGTGAAAAGATAAAG---ACGCCCCAAACATCTGGCTCAGATGTTCCCCATGCCCCGGT---------CATCAGCTAGTAGA--------------------------------CCCAGATGCCCAGGGACCCACAGAA------CCTTTGCTTTGGA--CGTGTGTGGAGGCAGGACCAGCCCCTGGAGGA-ACTGCAGGCCTCCTTGG--GCATCCCCATCCTAGG-AGGCAGGTCCACGTCTC-GGGCAGGGC---CTGCATCCTTGG-----------CC------------ACTCGGCTGCTGACCTTCGCTGTAGC-TCAGT---CTTTTCCAGA-----------------GCAAAGGGGCAGATAGATAAAG--------------CCAGGCTGG--AGAAA---GAGAAAGG i aotNan1.NW_018513311v1 I 78 C 0 s dasNov3.JH576208 1770004 555 + 4416731 TCAGATGCTCATTTTAACTGTGAACTGTACTGT------------AAGAAAATATGAAATAAAAAAGTA-TCCAGC-CCA--------------------------------------GGTATGTCATATAGAAA-TGAGGAGTTATTCAACTCTATCGGGTCAGAGTGCTCAGTCCATAAAACAAGTATGTG---TTCTGCAAGGGCTGAAGGGATAG---GCTTTCTCAACAACTGTTTGGTATGTTTTATACTCACCAGCTCTTTTTCTCCTTAGCTATCAGGGCCTGAATTTCCCAGTGAACAGCCTTGATTTTCCAAGATCCCCAGGGGCCGACAAAA------GCTTTAATTAGAACTCTTCTGTGGAGGCAAGGCCTGATGTCAGTGGA-ACAGACCACTTCCCCTGCAGCATTCCAGTCTGAATGAAGTATATAAAC-TCCCGGGACAGAGAACCCTGCATCCTCAGGGAAGAGGGGACCTCATTAATTGAAACTTGGCTGTGGAAATTCGCAGCAGC-TGACAAGTCTTTTTCAGATGTGTTACTCCTCCCAAAAAGAGAAAGTAGTTGAAAAAGGAGTGCTCTTTACCCATTTCTGG--GGAAATTTGAGAAAGG i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90026707 1720 - 120129022 I e otoGar3.GL873658 947316 10 + 5252280 I e panPan2.chr2A 1398611 2013 + 114371477 I a score=18540.000000 s hg38.chr2_KI270774v1_alt 164104 9 + 223625 GCCGTTCCt s panTro5.chr2A 1461343 9 + 111504155 GCCGTTTCt i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1423869 8 + 1464242 GCC-TTTCt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1146484 9 + 81552678 GCCATTTCt i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1448248 9 - 111193037 GCCGcttct i macFas5.chr13 C 0 I 124 s calJac3.chr14 1426918 9 - 108792865 GCAGTTTTt i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1255791 9 - 7082604 GCAGTTTCt i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1349494 9 + 1864846 GTGTTTTCT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 168248 9 + 287728 GCGGTTTCT i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1770559 9 + 4416731 ACAGTTTTT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90026707 1720 - 120129022 I e otoGar3.GL873658 947316 10 + 5252280 I e colAng1.NW_012118821v1 1428528 134 - 13651311 I e manLeu1.NW_012103754v1 996185 133 - 2200435 I e chlSab2.chr14 1508170 134 - 107702431 I e cerAty1.NW_012000820v1 1430675 134 - 10304083 I e macNem1.NW_012011978v1 1476236 134 + 3644372 I e rheMac8.chr13 1475801 134 + 108979918 I e panPan2.chr2A 1398611 2013 + 114371477 I a score=8528.000000 s hg38.chr2_KI270774v1_alt 164113 4 + 223625 gcag s panTro5.chr2A 1461352 4 + 111504155 gcag i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1423877 4 + 1464242 gcag i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1146493 4 + 81552678 gcag i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1426927 4 - 108792865 ggag i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1255800 4 - 7082604 ggag i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1349503 4 + 1864846 GGAG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 168257 4 + 287728 GGAG i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1770568 4 + 4416731 AGAG i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90026707 1720 - 120129022 I e otoGar3.GL873658 947316 10 + 5252280 I e colAng1.NW_012118821v1 1428528 134 - 13651311 I e manLeu1.NW_012103754v1 996185 133 - 2200435 I e chlSab2.chr14 1508170 134 - 107702431 I e cerAty1.NW_012000820v1 1430675 134 - 10304083 I e macNem1.NW_012011978v1 1476236 134 + 3644372 I e macFas5.chr13 1448257 124 - 111193037 I e rheMac8.chr13 1475801 134 + 108979918 I e panPan2.chr2A 1398611 2013 + 114371477 I a score=7416.000000 s hg38.chr2_KI270774v1_alt 164117 2 + 223625 tg s panTro5.chr2A 1461356 2 + 111504155 tg i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1423881 2 + 1464242 tg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1146497 2 + 81552678 tg i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1448381 2 - 111193037 ta i macFas5.chr13 I 124 C 0 s calJac3.chr14 1426931 2 - 108792865 tg i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1255804 2 - 7082604 tg i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1349507 2 + 1864846 TG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 168261 2 + 287728 TG i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1770572 2 + 4416731 TG i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90026707 1720 - 120129022 I e otoGar3.GL873658 947316 10 + 5252280 I e colAng1.NW_012118821v1 1428528 134 - 13651311 I e manLeu1.NW_012103754v1 996185 133 - 2200435 I e chlSab2.chr14 1508170 134 - 107702431 I e cerAty1.NW_012000820v1 1430675 134 - 10304083 I e macNem1.NW_012011978v1 1476236 134 + 3644372 I e rheMac8.chr13 1475801 134 + 108979918 I e panPan2.chr2A 1398611 2013 + 114371477 I a score=715024.000000 s hg38.chr2_KI270774v1_alt 164119 88 + 223625 ggtgctgttgctgccccacccaggcccc-tttatctgcagggccccatcccccagtggcctccaat--gttggctgacaaa-gtctcctggt s panTro5.chr2A 1461358 85 + 111504155 g-tgctgttgctgccccacccaggcccc-tttatctgcagggccc-atcccc-agtggcctccaat--gttggctgacaaaagtctcctg-t i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1423883 87 + 1464242 g-tgctgttgctgccccacccaggcccc-tttatctgcagggccccatcccccagtggcctccaat--attggctgacaaa-gtctcctggt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1146499 88 + 81552678 ggtgctgttgctgccccacccagacccc-tttatctgcagggccccatcccccagtggcctccaat--gttggctgacaaa-gtctcCTGGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1475935 88 + 108979918 ggtgctgttgctgccccacccagacccc-tttaccagcagggccccattccccagcagcctccaat--gttggctgacaaa-atctcccagt i rheMac8.chr13 I 134 C 0 s macFas5.chr13 1448383 88 - 111193037 ggtgctgttgctgccccacccagacccc-tttaccggcagggccccattccccagcagcctccaat--gttggctgacaaa-atctcccagt i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1476370 88 + 3644372 ggtgctgttgctgccccacccagacccc-tttaccggcaggtccccattccccagcagcctccaat--gttggctgacaaa-atctcccagt i macNem1.NW_012011978v1 I 134 C 0 s cerAty1.NW_012000820v1 1430809 88 - 10304083 ggtgctggtgctgccccacccagacccc-tttaccggcagggccccgttccccagcagcctccaat--gttggctgacaaa-atctcccagc i cerAty1.NW_012000820v1 I 134 C 0 s chlSab2.chr14 1508304 88 - 107702431 ggtgctggtgctgccccacccagacgcc-tttactggcaggaccccatttcccagcggcctccaat--gttggctgacaaa-atctcccagt i chlSab2.chr14 I 134 C 0 s manLeu1.NW_012103754v1 996318 88 - 2200435 ggtgctggtgctgccccacccagacccc-tttaccggcagggccccgttccccagcggcctccaat--gttggctgacaaa-atctcccagt i manLeu1.NW_012103754v1 I 133 C 0 s colAng1.NW_012118821v1 1428662 88 - 13651311 ggtgctgttgctgccccacccagacccc-tttaccggcagggccccattccccaggagcctccaat--gttggctgacaaa-atctcccagc i colAng1.NW_012118821v1 I 134 C 0 s calJac3.chr14 1426933 88 - 108792865 ggtgctgttgtggccccacccagacccc-tttacctgcacggccccaccccccagAAGCCTCCTAT--GTGGGCTGACAAA-ATCTCTTGGT i calJac3.chr14 C 0 I 4 s saiBol1.JH378218 1255806 88 - 7082604 ggtgctgttggggccccacccagacccc-tttacctgcatggccccatcccccagcggcCTCCTAT--GTGGGTTGACAAG-ATCTCATGGT i saiBol1.JH378218 C 0 I 3 s cebCap1.NW_016107827v1 1349509 88 + 1864846 GGTGCTGTTGTGGCCCCACCCAGCCCCC-TTTACCTGCACGGCCCCATCCCCCAGTGGCCTCCTAC--GTGGGCTGACAAG-ATCTCCTGGT i cebCap1.NW_016107827v1 C 0 I 11 s aotNan1.NW_018513311v1 168263 88 + 287728 GGTGCTGTTGTGGCCCCACCCAGACCCC-TTTACCTGCACGGCCCCATCCCCTAGCGGCCTCCCAC--GTGGGCTGACAAA-ATCTCCTGGT i aotNan1.NW_018513311v1 C 0 I 4 s dasNov3.JH576208 1770574 90 + 4416731 -GGTCTTCtggtgccccatcagatccccatttactggcagtgctcccatccctagtggctctgaattagttgcacgaaaca-atcttaaagt i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90026707 1720 - 120129022 I e otoGar3.GL873658 947316 10 + 5252280 I e panPan2.chr2A 1398611 2013 + 114371477 I a score=18782.000000 s hg38.chr2_KI270774v1_alt 164207 8 + 223625 cgttcctc- s panTro5.chr2A 1461443 6 + 111504155 cgt--ctc- i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1423970 8 + 1464242 tgttcctc- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1146587 6 + 81552678 CGT--TCC- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1476023 8 + 108979918 cgttcctc- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1448471 8 - 111193037 cgttcctc- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1476458 8 + 3644372 cgttcctc- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1430897 8 - 10304083 cgttcctc- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1508392 8 - 107702431 cgttcctc- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 996406 8 - 2200435 cgttcctc- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1428750 7 - 13651311 catt-ctc- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1427025 5 - 108792865 ---TACTC- i calJac3.chr14 I 4 I 2 s saiBol1.JH378218 1255897 5 - 7082604 ---TACTC- i saiBol1.JH378218 I 3 I 2 s aotNan1.NW_018513311v1 168355 5 + 287728 ---CACTC- i aotNan1.NW_018513311v1 I 4 I 2 s dasNov3.JH576208 1770664 8 + 4416731 -ggtcctct i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90026707 1720 - 120129022 I e cebCap1.NW_016107827v1 1349597 11 + 1864846 I e otoGar3.GL873658 947316 10 + 5252280 I e panPan2.chr2A 1398611 2013 + 114371477 I a score=75028.000000 s hg38.chr2_KI270774v1_alt 164215 9 + 223625 tccagggGT s panTro5.chr2A 1461449 9 + 111504155 ttccagggT i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1423978 9 + 1464242 tccagggGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1146593 9 + 81552678 TCCAGGGGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1476031 9 + 108979918 tccagggGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1448479 9 - 111193037 tccagggGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1476466 9 + 3644372 tccagggGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1430905 9 - 10304083 tccagggGT i cerAty1.NW_012000820v1 C 0 I 5 s chlSab2.chr14 1508400 9 - 107702431 tccagggGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 996414 9 - 2200435 tccaggagt i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1428757 9 - 13651311 tccAGGGGT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1427032 9 - 108792865 TCCAGGGGT i calJac3.chr14 I 2 C 0 s saiBol1.JH378218 1255904 9 - 7082604 TCCAGGGGT i saiBol1.JH378218 I 2 C 0 s cebCap1.NW_016107827v1 1349608 9 + 1864846 TCCAGGGGT i cebCap1.NW_016107827v1 I 11 C 0 s aotNan1.NW_018513311v1 168362 9 + 287728 TCCAGGGAT i aotNan1.NW_018513311v1 I 2 C 0 s dasNov3.JH576208 1770672 3 + 4416731 tct------ i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90026707 1720 - 120129022 I e otoGar3.GL873658 947316 10 + 5252280 I e panPan2.chr2A 1398611 2013 + 114371477 I a score=5761.000000 s hg38.chr2_KI270774v1_alt 164224 24 + 223625 AGCT-GTGGAGGCTGTTCCCTGCCC---------- s panTro5.chr2A 1461458 24 + 111504155 AGCTTGTGGAGGCTGTTCC-TGCCC---------- i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1423987 24 + 1464242 AGCT-GTGGAGGCTGTTCCCTGCCC---------- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1146602 24 + 81552678 AGCT-GTGGAGGCTGCCCCCTGCCC---------- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1476040 5 + 108979918 --------------------TCCTC---------- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1448488 5 - 111193037 --------------------TCCTC---------- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1476475 5 + 3644372 --------------------TCCTC---------- i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1508409 5 - 107702431 --------------------TCCTC---------- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 996423 5 - 2200435 --------------------tcctc---------- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1428766 5 - 13651311 --------------------TCCTC---------- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1427041 24 - 108792865 AGCT-GTGGAGGCTGAACCCTGCCC---------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1255913 24 - 7082604 AGCT-GTGGAGGCTGAACCCTGCCC---------- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1349617 24 + 1864846 AGCT-GTGGAGGCTGAACCCTGCCC---------- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 168371 24 + 287728 AGCT-GTGGAGGCTGAACCCTGCCC---------- i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1770675 30 + 4416731 -----ctagagaagttgccctcCCAGGGCAGGCCT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90026707 1720 - 120129022 I e otoGar3.GL873658 947316 10 + 5252280 I e cerAty1.NW_012000820v1 1430914 5 - 10304083 I e panPan2.chr2A 1398611 2013 + 114371477 I a score=303526.000000 s hg38.chr2_KI270774v1_alt 164248 35 + 223625 -----------------TGCAGGGACAGCCAGGCCCCTACCTCAAGGCTGGA s panTro5.chr2A 1461482 34 + 111504155 -----------------TGCAGGGACAGCCAGGCCC-TACCTCAAGGCTGGA i panTro5.chr2A C 0 I 24 s gorGor5.CYUI01015607v1 1424011 35 + 1464242 -----------------TGCAGGGACAGCCAGGCCCCTACCTCAAGGCTGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1146626 35 + 81552678 -----------------TGCAGGGACAGCCAGGCCCCTGCCTCAAGGCTGGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1476045 35 + 108979918 -----------------TGCAGGGACAGCCAGTCCCCTGCCTCAAGGCTGGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1448493 35 - 111193037 -----------------TGCAGGGACAGCCAGTCCCCTGCCTCAAGGCTGGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1476480 35 + 3644372 -----------------TGCAGGGACAGCCAGTCCCCTGCCTCAAGGCTGGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1430919 35 - 10304083 -----------------TGCAGGGACAACCAGGCCCCTGCCTCAAGGCTGGA i cerAty1.NW_012000820v1 I 5 C 0 s chlSab2.chr14 1508414 35 - 107702431 -----------------TGCAGGGATAGCCAGGCCCCTGCCTCAAGGCTGGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 996428 35 - 2200435 -----------------tGCAGGGACAACCAGTCCCCTGCCTCAAGGCTGGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1428771 35 - 13651311 -----------------TGCAGGGACAGTCAGGCCCCTGCCTCAAGGCTGGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1427065 34 - 108792865 -----------------AACAGGGACGGCCAGGCCCCTGCCTCACGG-TGGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1255937 35 - 7082604 -----------------TACAGGGACGGCCAGGCCCCTGCCTCACGGCTGGA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1349641 35 + 1864846 -----------------TACAGGGATGGCCAGGCCCCTGCCTCACGGCTGGA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 168395 35 + 287728 -----------------TACAGGGACGGCCAGGCCCCTGCCTCACGGCTGGA i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1770705 50 + 4416731 TGATCAATAATTGACAAAGCaagggcag--ggccctttgcctccagactaga i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90026707 1720 - 120129022 I e otoGar3.GL873658 947316 10 + 5252280 I e panPan2.chr2A 1398611 2013 + 114371477 I a score=188664.000000 s hg38.chr2_KI270774v1_alt 164283 22 + 223625 CCAAGCCCAGGTGCGCCATGCT s gorGor5.CYUI01015607v1 1424046 22 + 1464242 CCAAGCCCAGGTGCGCCATGCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1146661 22 + 81552678 CCAAGCCCAGGTGCGCCACGCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1476080 22 + 108979918 CCAAGCCCAGGTGTGCCATGCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1448528 22 - 111193037 CCAAGCCCAGGTGTGCCATGCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1476515 22 + 3644372 CCAAGCCCAGGTGTGCCATGCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1430954 22 - 10304083 CCAAGCCCAGGTGTGCCATGCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1508449 22 - 107702431 CCAAGCCCAGGTGTGCCATGCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 996463 22 - 2200435 CCAAGCCCAGGTGTGCCATGCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1428806 22 - 13651311 CCAAGCCCAGGTGTGCCATGCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1427099 22 - 108792865 CCAAGCCCAGGTGCGCCACACT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1255972 22 - 7082604 CCAAGCCCAGGTGCGCCATGCT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1349676 22 + 1864846 CTAAGCCCAGGTGTGCCACTCT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 168430 22 + 287728 CCAAGCCCAGGTGCGCCATGCT i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1770755 22 + 4416731 ccaaatctgggtattttgtgct i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90026707 1720 - 120129022 I e otoGar3.GL873658 947316 10 + 5252280 I e panPan2.chr2A 1398611 2013 + 114371477 I e panTro5.chr2A 1461516 24 + 111504155 I a score=95501.000000 s hg38.chr2_KI270774v1_alt 164305 15 + 223625 --GCAGGGC----TTCCTGCG-- s panTro5.chr2A 1461540 15 + 111504155 --GCAGGGC----TTCCTGCG-- i panTro5.chr2A I 24 C 0 s gorGor5.CYUI01015607v1 1424068 15 + 1464242 --GCAGGGC----TTCCTGCG-- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1146683 15 + 81552678 --GCAGGGC----TTCCTATG-- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1476102 15 + 108979918 --GCAGGGC----TGCCTGTG-- i rheMac8.chr13 C 0 I 88 s macFas5.chr13 1448550 15 - 111193037 --GCAGGGC----TGCCTGTG-- i macFas5.chr13 C 0 I 88 s macNem1.NW_012011978v1 1476537 15 + 3644372 --GCAGGGC----TGCCTGTG-- i macNem1.NW_012011978v1 C 0 I 44 s cerAty1.NW_012000820v1 1430976 15 - 10304083 --GCAGGGC----TGCCTGCG-- i cerAty1.NW_012000820v1 C 0 I 250 s chlSab2.chr14 1508471 15 - 107702431 --GCAGGGC----TGCCTGTG-- i chlSab2.chr14 C 0 I 44 s manLeu1.NW_012103754v1 996485 15 - 2200435 --GCAGGGC----TGCCTGCG-- i manLeu1.NW_012103754v1 C 0 I 264 s colAng1.NW_012118821v1 1428828 15 - 13651311 --GCAGGGC----TGCCTGCG-- i colAng1.NW_012118821v1 C 0 I 233 s calJac3.chr14 1427121 19 - 108792865 --GCAGGGCCTGGTTCCTGCC-- i calJac3.chr14 C 0 I 42 s saiBol1.JH378218 1255994 19 - 7082604 --GCAGGGCCTGGTTCCTGCC-- i saiBol1.JH378218 C 0 I 27 s cebCap1.NW_016107827v1 1349698 19 + 1864846 --GCAGGGCCTGGTTCCTGCC-- i cebCap1.NW_016107827v1 C 0 I 43 s aotNan1.NW_018513311v1 168452 19 + 287728 --GCAGGGCCTGGTTCCTGCC-- i aotNan1.NW_018513311v1 C 0 I 27 s dasNov3.JH576208 1770777 17 + 4416731 ccacatg------tgtctgcaag i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90026707 1720 - 120129022 I e otoGar3.GL873658 947316 10 + 5252280 I e panPan2.chr2A 1398611 2013 + 114371477 I a score=961219.000000 s hg38.chr2_KI270774v1_alt 164320 128 + 223625 GAGGAGCACAAGCCAGGC-----------CTGGCTGTGTCACGTCCTTGGGGA-----------GCTGGGTGC----CTGCTCAGCCTCCTCCCTGGAGCACCCTCAGCAAGCATATGGGA-------------------------------GCCTCTTA-TTGGACTAATAGGGCATGTTTGAGA s panTro5.chr2A 1461555 124 + 111504155 GAGGAGCACAAGCCAGGC-----------CTGGCTGTGTCACGTCCT-GGGGA-----------GCTGGGTGC----CTGCTCAGCCTCCTCCCCGGAGCACCCTCAGCAAGCATATGGGA-------------------------------GCCTATTA-TTGG--TAATAGGGCATGTT-GAGA i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1424083 128 + 1464242 GAGGAGCACAAGCCAGGC-----------CTGGCTGTGTCAAGTCCTTGGGGA-----------GCTGGGTGC----CTGCTCAGCCTCCTCCCTGGAGCACCCTCAGCAAGCATATGGGA-------------------------------GCCTCTTA-TTGGACTAATAGGGCATGTTTGAGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1146698 127 + 81552678 GAGGAGCACAAGCCAGGC-----------CTGGCTGTGTCACGTCCTTGGGGA-----------GCTGGGTAT----CTGCTCAGCCTTCTCCCT-GAGCACCCGCAGCAAGCACATGGGA-------------------------------GCCTCTTA-TTGGACTAATAGGGCATGTTGGAGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1476205 139 + 108979918 GAGGAGCACAAGCCAGGC-----------CTGGCTGTGTTGCATCCTTGGGGAGCTGGGTGCTGGCTGGGTGC----CTGCTCAGCCTCCTCCCCAGAGCACCCTCAGCAAACACATGGGA-------------------------------GCCTCTTG-TTGGACTAATAGGGCATGTTTGAGA i rheMac8.chr13 I 88 C 0 s macFas5.chr13 1448653 139 - 111193037 GAGGAGCACAAGCCAGGC-----------CTGGCTGTGTTGCATCCTTGGGGAGCTGGGTGCTGGCTGGATGC----CTGCTCAGCCTCCTCCCCGGAGCACCCTCAGCAAACACATGGGA-------------------------------GCCTCTTG-TTGGACTAATAGGGCATGTTTGAGA i macFas5.chr13 I 88 C 0 s macNem1.NW_012011978v1 1476596 139 + 3644372 GAGGAGCACAAGCCAGGC-----------CTGGCTGTGTTGCATCCTTGGGGAGCTGGGTGCTGGCTGGGTGC----CTGCTCAGCCTCCTCCCCGGAGCACCCTCAGCAAACACATGGGA-------------------------------GCCTCTTG-TTGGACTAATAGGGCATGTTTGAGA i macNem1.NW_012011978v1 I 44 C 0 s cerAty1.NW_012000820v1 1431241 139 - 10304083 GAGGAGCACAAGCCAGGC-----------CTGGCTGTATTGCATCCTTGGGGAGCTGGGTGCTGGCTGGGTGC----CTGCTCAGCCTCCTCCCCGGAGCACCCTCAGCAAACACATGGGA-------------------------------GCCTCTTG-TTGGACTAATAGGGCATGTTTGAGA i cerAty1.NW_012000820v1 I 250 C 0 s chlSab2.chr14 1508530 139 - 107702431 GAGGAGCACGAGCCAGGC-----------CTGGCTGTGTTGCATGCTTGGGGACCTGGGTGCTGGCTGGGTGC----CTACTCAGCCTCCTCCCCGGAGCACCCTCAGCAAACACATGGGA-------------------------------GCCTCTTG-TTGGACTAATAGGGCATGTTTGAGA i chlSab2.chr14 I 44 C 0 s manLeu1.NW_012103754v1 996764 139 - 2200435 GAGGAGCACAAGCCAGGC-----------CTGGCTGTATTGCATCCTTGGGGAGCTGGGTGCTGGCTGGGTGC----CTGCTCAGCCTCCTCCCCGGAGCACCCTCAGCAAACACATGGGA-------------------------------GCCTCTTG-TTGGACTAATAGGGCATGTTTGAGA i manLeu1.NW_012103754v1 I 264 C 0 s colAng1.NW_012118821v1 1429076 139 - 13651311 GAGGAGCACAAGCCAGGC-----------CTGGCTGTGTTGCGTCCTTGGGGAGCTGGGTGCTGGCTGGGTGC----CTGCTCAGCCTCCTCCATGGAGTACCCTCAGCAAACACATGGGA-------------------------------GCCTCTTG-TTGGACTAATAGGGCATGTTTGAGA i colAng1.NW_012118821v1 I 233 C 0 s calJac3.chr14 1427182 121 - 108792865 GAGGAGCAAGAGCCAGGC-----------CCAGCTGTATCAAGTCCTTGGGGA-----------GCTTGGTGC---------------CCTCTCTGGGGCGCCCTCAGCAAACGCATGGGAGCCCT--------------------------GCCTCTTA--TGGACTAATGGGGCATGTGTGAGA i calJac3.chr14 I 42 C 0 s saiBol1.JH378218 1256040 125 - 7082604 GAGGAGCACGAGCCAGGC-----------CCAGCTGTATCAAGTCCTCAGGGA-----------GCTTGGTGC----CTGCTCAGCCTCCTCTCTGGAGCGCCCTCAGCGAGCGCATGGGAGCCCT--------------------------GCCCCTTA--CGGACTAATGGGGCATG------- i saiBol1.JH378218 I 27 C 0 s cebCap1.NW_016107827v1 1349760 132 + 1864846 GAGGAGCATGCGCCAGGC-----------CCAGATGTATTAAGTCCTTGGGGA-----------GCCTGGTGC----CTGCTCAGCCTCCTCTCTGGAGCGCCCTTAGCGAGCGCTTGGGAGCCCT--------------------------GCCTCTTA--CGGACTAACGGGGCATGTGTGAGA i cebCap1.NW_016107827v1 I 43 C 0 s aotNan1.NW_018513311v1 168498 132 + 287728 GAGGAGCACAAGCCAGGC-----------TCAGCTGTATCAAGTCCTTGGGGA-----------GCTTGGTGC----CCTCTCAGCCTCCTCTCTGGAGTGCCCTTGGCGAGCGCATGGGAGCCCT--------------------------GCCTCTTA--TGGACTAATGGGGCATGTGAGAGA i aotNan1.NW_018513311v1 I 27 C 0 s dasNov3.JH576208 1770794 171 + 4416731 aatgaacaaaacctagacaacaactgacaccacatttgttaaattttttccct-----------gctgaatactgcttccctcagttcccttCTC----CTTCCTCTGTAGACGCTTAGGAAGCCTTCTTTCTAGGGAACCTGAGAAGGACATTTTCTTATTTGGACTAACGGGGCATTTGTGAGA i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90026707 1720 - 120129022 I e otoGar3.GL873658 947316 10 + 5252280 I e panPan2.chr2A 1398611 2013 + 114371477 I a score=475788.000000 s hg38.chr2_KI270774v1_alt 164448 75 + 223625 AAATGCTGAGTGA-------TGTTCTGCGTAGAGCAGGGTAGG--TGACTTTGAAA--GCAGTCGAGAGTCAGAAAGTTCAGA-GGA s panTro5.chr2A 1461679 77 + 111504155 AAATGCTGAGTGA-------TGTTCTGCATAGAGCAGGGTAGGAGTGACTTTGAAA--GCAGTCGAGAGTCGGAA-GTTCAGAAGGA i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1424211 75 + 1464242 AAATGCTGAGTGA-------TGTTCTGCGTAGAGCAGGGTGGG--TGACTTTGAAA--GCAGTCGAGAGTCAGAAAGTTCAGA-GGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1146825 78 + 81552678 AAATGCTGAGTGAT----GTTGTTCTGCATAGAGCAGGGTGGG--TGACTTTGAAA--GCAGTCGAGAGTCAGGAGGTTCAGA-GGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1476344 71 + 108979918 AAATAGTGAGTGAC----ATTGTTCTGTGGAGAGCAGGGTGGG--TGACGTTGAAA--GCAGTCAGGAG-------GTTCAGA-GGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1448792 71 - 111193037 AAATAGTGAGTGAC----ATTGTTCTGTGGAGAGCAGGGTGGG--TGACGTTGAAA--GCAGTCAGGAG-------GTTCAGA-GGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1476735 71 + 3644372 AAATAGTGAGTGAC----ATTGTTCTGTAGAGAGCAGGGTGGG--TGACGTTGAAA--GCAGTCAGGAG-------GTTCAGA-GGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1431380 71 - 10304083 AAATACTGAGTGAC----GTTGTTCTGCGGAGAGCAGGGTGGG--TGACGTTGAAA--GCAGTCAGGAG-------GTTCAGA-GGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1508669 71 - 107702431 AAATACTGAGTGAC----ATTGTTCTGCGGAGAGCAGGGAGGG--TGACGTTGAAA--GCAGTCAGGAG-------GTTCAGA-GGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 996903 71 - 2200435 AAATAGTGAGTGAC----GTTGTTCTGCGGAGAGCAGGGTGGG--TGACGTTGAAA--GCAGTCAGGAG-------GTTCAGA-GGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1429215 71 - 13651311 AAATACTGAGTGAC----GTTGTTCTGCGGAGAGTAGGGTGGG--TGACGTTGAAA--GCAGTCAGGAG-------GTTCAGA-GGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1427303 77 - 108792865 AAACTTGGGGTGAC----ATTGTTCTGCACGGAGCCTGCTGGG---GACGTTGAGA--GCAACTGGGAGTCGGGGGGTTCAGA-GGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1256165 76 - 7082604 -AACTCGGGGTGAC----ATTGTTCTGCACAGAGCCCGGTGGG---GACGTTGAGA--GCAATTGGGGGTCGGGGGGTTCAGA-GGA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1349892 76 + 1864846 AAACTCGGGGTAAC----ATTGTTCTGCACAGAGCCCGGTGGG---GACGTTGAGA--GCAATTGGGAGTC-GGGGGTTCAGA-GGA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 168630 77 + 287728 AAACTCGGGGTGAC----ATTGTTCTGCACAGAGCCCAGTGGG---GACGTTGAGA--GTGATTGGGAGTCGGGGGGTTCAGA-GGA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 947326 68 + 5252280 AGACACTGGGTGT------TTGCACTGAGCAGGGTGAAGCAGG---AGCATCAGGA--GGAGTCAGGAG-------GTCCAGA-TGA i otoGar3.GL873658 I 10 C 0 s dasNov3.JH576208 1770965 73 + 4416731 AAATGTTGAGTGACTTTTTTTTTTCTCTGTAGAGC-GGGTGGT---GATATTGAGAAGAGAGTCAGAAG---------TCAGG-GGA i dasNov3.JH576208 C 0 I 3378 e mm10.chr12 90026707 1720 - 120129022 I e panPan2.chr2A 1398611 2013 + 114371477 I a score=3789215.000000 s hg38.chr2_KI270774v1_alt 164523 501 + 223625 ----GCCTGTGCCAGG--GGCTACGCGGC--TGTTTCCCACCGTCGGTGACAAGGATCGCATCTCCAGGTCTCTTCGTCCTGGTCTCCCCGTGTGCTGGGGTCCTGGCTTCCCGTCACCTTCACGCCCATCATTTTCCCAAGTGTGGACCTTTCAGTCATTCCCACTGGT-GAGTTGTGAAGGCAAAGAAATGGAGAGT-GGCCACAAGTCAGCAC--CTGGTGGCTTTGGCAGAGGCTGTGGGGAACCAGGAGGCTGGG-GTG-AGAGCAGACGTGGAGGAGCAGCT-TGAAGCAGCCTGGGAAGATGAGGCCTCTACATGGTACCGCCAGCAGAGGAAGAAGACATGGCCCAC-CTGGGAGGT---GAGCAGGAGGGGCACCTGACAGCGACGATGCCCCGGTCTCACAGTATGGCGTCTGC-CCAGGTCCAATAGTTCAGAGTAACCATTTCCCCCATGCGACCAGGTAAAGAAATACCAGAAGCATTTCCAGAAGAAT--TGCC-ATGAAAATTCCAGAG s panTro5.chr2A 1461756 467 + 111504155 ----GCCTGTGCCAGG--GGCTACGCGGCGCTGTTTCC-ACCGTCAGTGACAAGGATCGCATCTCCAGGTCTCTTTGTCCTGGTCT-----TGTGCTGGGGTCCTGGCTTCCCGTCACCTTCACGCCCATCATTTTTCCAAGTGTGGACCTTTCAGTCATTCC-ACTGGT-GAGTTGTGAAGGCAAAGAA-TGGAGAGT-GGCCACAAGTCAGCACACCTGGTG--TTTGC--GAGGTT-TGGGGGACC--GAGGCTGGGCGTGTAGAGCAGACGTGG--GAGCAGCT-TGAAGCAGCCTGGGA---TGAGGCCTCT---------------CAGGGAAAGAG---ATGGCCCAC-CTGGGAGGT---GAGCAGGAGGGGCACCTAAGCGCTGAGATGCCA-GGTCTCACAGTATGG-ATCTGCACCAGGTC-AATAGT-CAGAGTAAC-ATTTCCCCCATGCGACCAGGTAAA-AAGTACCAGAAGCATTTTCAGAAGAATCTTGCCTATGAAAATTCCAGAG i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1424286 500 + 1464242 ----GCCTGTGCCAGG--GGCTACGCGGC--TGTTTCCCACCGTCGGTGACAAGGATCGCATCTCCAGTTCTCTTCATCCTGGTCTCTCTGTGTGCTGGGGTCCTGGCTTCCCGTCACCTTCATGCCCATCATTTTCCCAAGTGTGGACCTTTCAGTCATTCCCACTGGT-GAGTTGTGAAGGCAAAGAAATGGAGAGT-GGCCACAAGTCAGCAT--CTGGTGGCTTTGGCAGAGGCT-TTGGGAACCAGGAGGCTGGG-GTG-AGAACAGATGTGGAGGAGCAGCT-TGAAGCAGCCTGGGAAGATGAGGCCTCTACACGGCACTGCCAGCAGAGGAAGAAGACATGGCCCAC-CTGGGAGGT---GAGCAGGAGGGGCACCTGACAGCGACGATGCCCAGGTCTCACAGTATGGCGTCTGC-CCAGGTCCAATAGTTCAGAGTAACCATTTCCCCCATGCAACCAGGTAAAGAAATACCAGAAGCATTTTCAGAAGAAT--TGCC-ATGAAAATTCCAGAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1146903 500 + 81552678 ----GCCTGTGCCAGG--GGCTACGCGGC--TGTTTCCCACCATCGGTGACAAGGATCACATCTCCAGGTCTCTTCGTCCTGGTCTCCCCGTGTGCTGGGGTCCTGGCTTCCCGTCACCTTCACGCCCATCATTTTCCCAAGTGTGGACCTTTCAGTCATTCCCGCTGGT-GAGTTGTGAAGGCAAAGAAATGGAGAGT-GGCCACAAGTCAGCAC--CTGGTGGCTTTGGCAGAGGCTGTGGGGAACCAGGAGGCTGGG-GTG-AGAGCAGACATGGAGGAGCAGCT-TGAAGCAGCTTGGGAAGATGAGGCCTCTACGTGGCACCACCAGCAGAGGAAGAAGACGTGGCCCAC-CTGGGAGGT---GAGCAGGAGGGGCACCTGACAGCGACGATGCCCAGGTCTGACAGTATGGTGTCCAC-CCAGGTCCAATAGTTCACAGTAACCATTTCCCCCATGCGA-CAGGTAAAGAAATACCAGAAGCATTTGCAGAAGAAT--TGCC-ATGAAAATTCCAGAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1476415 500 + 108979918 ----GCCTGTGCCAGG--GGCTGCGTGGC--TGTTTCCCACCGTCGGTGACAAGCATCGCATCTCCAGGTCTCTTAGTCCTGGTCTCCCCCTATGCTGGGGTCCTGGCTTCCCGCCACCTTCACGCCCACCATTTTCCCAAGTGTGGACCTTTCGGTCATTCCCACTGGT-GAGTTGTGAAGGCCAAGAAATGGAGAGT-GGCCACAAGTCAGCGC--CTGGCAGCTTTGGCAGAGGCTGTGGGGAACCAGGAGGCT-GG-GTG-AGAGCAGACATGGAGGAGCAGCT-TGAAGCCGCTTGGGAAGGCAAGGCCTCTACACGGCACTGCCAGCAGCGAAAGAAGACGGGGCCCAC-CTGGGAGAT---GGGCAGGAGGGGCACCCAACAGCAACAATGCCCAGGTCTGACAGTATGGCGTCTGC-CCAGGTCCAATAATTCAGAGTAACCATTTTCCCTATGTGACCGGGTAAACAAATACCAGAAGCATTTTCACAAGAAT--TGCC-ATGAAAATTCCAGAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1448863 500 - 111193037 ----GCCTGTGCCAGG--GGCTGCGGGGC--TGTTTCCCACCGTCGGTGACAAGCATCACATCTCCAGGTCTCTTAGTCCTGGTCTCCCCCTATGCTGGGGTCCTGGCTTCCCGCCACCTTCACGCCCACCATTTTCCCAAGTGTGGACCTTTCGGTCATTCCCACTGGT-GAGTTGTGAAGGCCAAGAAATGGAGAGT-GGCCACAAGTCAGCGC--CTGGCAGCTTTGGCAGAGGCTGTGGGGAACCCGGAGGCT-GG-GTG-AGAGCAGACATGGAGGAGCAGCT-TGAAGCCGCTTGGGAAGGCAAGGCCTCTACACGGCACTGCCAGCAGCGAAAGAAGACGGGGCCCAC-CTGGGAGAT---GGGCAGGAGGGGCACCCAACAGCAACAATGCCCAGGTCTGACAGTATGGCGTCTGC-CCAGGTCCAATAATTCAGAGTAACCATTTTCCCTATGTGACCGGGTAAACAAATACCAGAAGCATTTTCACAAGAAT--TGCC-ATGAAAATTCCAGAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1476806 499 + 3644372 ----GCCTGTGCCAGG--GGCTGCGTGGC--TGTTTCCCACCGTCGGTGACAAGCATCGCATCTCCAGGTCTCTTAGTCCTGGTCTCCCCCTATGCTGGGGTCCTGGCTTCCCACCACCTTCACGCCCACCATTTTCCCAAGTGTGGACCTTTCGGTCATTCCCACTGGT-GAGTTGTGAAGGTCAAGAAATGGAGAGT-GGCCACAAGTCAGCGC--CTGGCAGCTTTGGCAGAGGCTGTGGGGAACCAGGAGGCT-GG-GTG-AGAGCAGACATGGAGGAGCAGCT-TGAAGCCGCTTGGGAAGACAAGGCCTCTACACGGCACTGCCAGCAGCGAAAGAAGACGGGGCCCAC-CTGGGAGAT---GGGCAGGA-GGGCACCCAACAGCAACAATGCCCAGGTCTGACAGTGTGGCGTCTGC-CCAGGTCCAATAATTCAGAGTAACCATTTTCCCTATGTGACCGGGTAAACAAACACCAGAAGCATTTTCACAAGAAT--TGCC-ATGAAAATTCCAGAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1431451 500 - 10304083 ----GCCTGTGCCAGG--GGCTGTGTGGC--TGTTTCCCACCGTTGGTGACAAGCATCGCATCTCCAGGTCTCTTAGTCCTGGTCTCCCCCTATGCTGGGGTCCTGGCTTCCTGTCACCTTCACGCCCACCATTTTCCCAAGTGTGGACCTTTCGATCGTTCCCACTGGT-GAGTTGTGAAGGCCAAGAAATGGAGAGT-GGCCACAAGTCAGCGC--C-AGCAGCTTTGGCAGAGGCTGTGGGGAACCAGGAGGCTGGG-GTG-AGAGCAGACATGGAGGAGCAGCT-TGAAGCAGCTTGGGAAGACAAGGACTCTACACGGCACTGCCAGCAGCGAAAGAAGACGGGGCCTAC-CTGGGAGAT---GGGCAGGAGGGGCACCCAACAGCAACAATGCCCAGGTCTGACAGTATGGCATCTGC-CCAGGTCCAATAATTCAGAGTAACCATTTTCCTCATGTGACCGGGTAAACAAATACCAGAAGCATTTTCACAAGAAT--TGCC-ATGAAAATTCCAGAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1508740 500 - 107702431 ----GCCTGTGCCAGG--GGCTGCGTGGC--TGTTTCCCACCGTTGGTGACAAGCGTCGCATCTCCAGGTCTCTTAGTCCTGGTCTCCCCCTATGCTGGGGTCCTGGCTTCCCGCCACCTTCACGCCCACCATTTTCCCAAGTGTGGACCTTTCGGTCATTCCCACTGGT-GAGTTGTGAAGGCCAAGAAATGGAGAGT-GGCCACAAGTCAGCGC--C-GGCAGCTTTGGCAGAGGCTGTGGGGAACCAGGAGGCTGGG-GTG-GGAGCAGACCTGGAGGAGCAGCT-TGAAGCAGCTTGGGAAGACAAGCCCTCTACACGGCACTGCCAGCAGCGAAAGAAGACGGGGCCCAC-CTGGGAGAT---GGGCAGGAGGGGCACCCGACAGCAATGATGCCCAGGTCTGACAGTGTGGCATCTGC-CCAGGTCCAATAGTTCAGAGTAACCATTTCCTCCACATGACCGGGTAAACAAATACCAGAAGCATTTTCACAAGAAT--TGCC-ATGAAAATTCCAGAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 996974 500 - 2200435 ----GCCTGTGCCAGG--GGCTGCGTGGC--TGTTTCCCACCGTTGGTGACAAGCATCGCATCTCCAGGTCTCTTAGTCCTGGTCTCCCCCTATGCTGGGGTCCTGGCTTCCTGTCACCTTCACGCCCACCATTTTCCCAAGTGTGGACCTTTCGATCATTCCCACTGGT-GAGTTGTGAAGGCCAAGAAATGGAGAGT-GGCCACAAATCAGCGC--C-GGCAGCTTTGGCAGAGGCTGTGGGGAACCAGGAGGCTGGG-GTG-AGAGCAGACATGGAGGAGCAGCT-TGAAGCAGCTTGGGAAGACAAGCCCTCTACACGGCACTGCCAGCAGCGAAAGAAGACGGGGCCCAC-CTGGGAGAT---GGGCAGGAGGGGCACCCGACAGCAATGATGTCCAGGTCTGACAGTATGGCATCTGC-CCAGGTCCAGTAATTCAGAGTAACCGTTTCCTCCACATGACCAGGTAAACAAATACCAGAAGCATTTTCACAAGAAT--TGCC-ATGAAAAATTCAGAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1429286 501 - 13651311 ----GCCTGTGCCAGG--GGCTGCATGGC--TGTTTCCCACCATTGGTGATAAGCATCGCATCTCCAGGTCTCTTAGTCCTGGTCTCCCCCTATGCTGGGGTCCTGGCTTCCCGTCACCTTCACGCCCACCATTTTCCCAAGTGTGGACCTTTCAGTCATTCGCACTGGT-GAGTTGTGAAGGCCAAGAAATGGAGAGT-GGCCACAAGTCAGCGC--CTGGCGGCTTTGGCAGAGGCTGTGGGGAACCAGGAGGCTGGG-GTG-AGAGCAGACATGGAGAAGCAGCT-TGAAGCAGCTTGGGAAGACAAGGCCTTTACATGGCACTGCCAGCAGCGAAAGAAGACGGGGCCCAC-CTGGGAGGT---GGGCAGGAGGGGCACCCGACAGCAACGATGCCCAGGTCTGACGGTATGGCATCTGC-CCAGGTCCAATAGTTCAGAGTAACCATTTCCTCCACATGACCAGGTAAACAAATACCAGAAACATTTTCACAAGAAT--TGCC-ATGAAAATTCCAGAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1427380 494 - 108792865 ----GCCCGTGCCTGG--GGCTGCATGGA--GGTTTCCCACCGTTGGTGAGAAGGATTGCATCTCCAGGTCTCTTCGTCCTGGCCTCCCCGGGTGCTGGGGTCCTGGCTTCCTGTCACCTTCACGCCCACCATTTTCC------TGAACCTTTCGGTCATTCCCACTGGT-GGGTTGTGAAGGCAAAGCAATGGAGACT-GGCCACAAGTCAGCAC--CTGGAGGCTTTGGCAGAGGTGGCAGGGACCCCGGAGGCTGGG-ATG-AGAGCAGACA---GGAAGCAGCC-TGAAGCCATGTGGGGACAAGGGGCCTCCGGAGGGCACTGCCAGCAGAGGAAGAAGATGTGGCCCAC-CTGGGAGGTGGAGGACAGGTGGGGCACCCGTCAGTGACAATGCCCA-GTCTGATAGTATTGTGTCTAA-CCAAGTCCAGTAGTTCAGAGCAGCCATTTCCCCCACACGACCAGGTAAAGAAATACCAGAACCATTTTCAGAAGAAT--TGCC-ATGAAAATTCCAGAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1256241 490 - 7082604 ----GCCTGTGCCTGG--GGCTGCAAGGT--GGTTTCCCACCACTGGCGAGAAGGGTCGCACCTCCA-GTCTCTCCGTCCTGGCCT-CCCGGGTGCTGGGGTCCTGGCTTCCTGCTACGTTCACGCTCACCGTTTTCCCAAGCATGAACCTTTCGGTCATTCCCGCTGGT--GGTTGTGAAG-----GCAATGGAGACC-GGCCACAAGTCAGCAC--TTGGAGGCTGTGGCAGA---GGCAGGGACCCCAGAGGCTGCG-GGG-AAAGCAGACA-GGGGGAGCAGCC-TGAAGCCGCGTGGGGACACGGGGCCTCGGGACGGCACCGCCAGCAGAGGAAGAAGATGTGGCCCAC-CTGGGAGGTGGAGGACAGGAGGGGCACCCGTCAGTGACAGTGCCCA-CTCTGGCAGTATGGCGTCT-G-CCAAGTCCAGTAGCTCAGAGTAGCCATTTCCCCCATGCGACCAGGTAAAGAAATACCAGAAGCACTTTCAGAAGAAT--TGCT-GTGAAAATTCCAGAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1349968 498 + 1864846 ----GCCTGTGCCTTG--GGCTGCATGGC--AGTTTCCCACCACTGGTGAGAAGGATCGCACCTCCA-GTCTCTCTGTCCTGGCCTCCCCAGGTGCTGCGGTCCTGGCTTCCTGTCACCTTCACCCCCACCATTTTCCCAAGCATGAACCTTTTGGTCATTCCTGCCGGT--GGTTGTGAAGGCAAAGCAATGGAGACT-GCCCACAAGTCAGCAC--CTGGAGGCTTTGGCAGAGGCAGCAGGGACCCCAGAGGCAGGG-GTG-AGAGCAGACA--GGGGGGCAGCC-TGAAGCCGCGTGGGGACACGGGGCCTCAGGACAGCACTGCCAGCAGAGGAAGAAGATGTGGCCCAC-CTGGGAGATGGAGGACAGGAGCGGCACCCGTCAGTGACAATGCCCA-GTCTGGCAGTATGGCGTCT-G-CCAAGTCCATTAGCTCAGAGTAGCCATTTCCCCCACCTGACCAGGTAAAGAAATACCAGGAGCATTTTCAGAAGAAT--TACT-GTGAAAATTCCAGAG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 168707 499 + 287728 ----GCCTGTGCCTGG--GGCTGCATGGC--GGTTTCCTACCATTGGTGAGAAGAATCGCATCTCCAGGTCTCTTCGTCCTGACCTCCCTGGGTGCTGGGGTCCTGGCTTCCTGTCACCTTCACGCCCACCATTTCCCCAAGCGTGAACCTTTCGGTCATTCCTGCTGGT-GGGTTGTGAAGGCAAAGCAATGGAGACT-GGCCACGAGTCAGCAC--CTGGAGGCTTTGGCAGAGGCGGCAGGGACCCCGGAGGCTGTG-GTG-AGAGCAGACA-GGGGGAGCAGCC-TGAAGCCACGTGGGGACAAGGGGCCTCGGGAGGACACTGCCAGCAGAG---GAAGATGTGGCCCAC-CTGGGAGGTGGAGGACAGGAGGGGCACCCGTCAGTGACGATGCCCA-GTCTGACAGTATGGTACCTGC-CCAAGTCCAGTAGTTCAGAGTAGCCATTTCCCCCACGCGACCAGGTAAATAAATACCAAAAGCATTTTCAGAAGAAT--TGCC-GTGAAAATTCCAGAG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 947394 456 + 5252280 GGAGGACTGAACATGGACAGGTCCTGGAC--AGAGTCACAGTGGTCACCATTAAAGTGACACCTCCAGGTCTGTTCGGTCTCCTCTCCCCC--------AGCCCCAGCTTCCTGCAACATCCAC-CTTGTCATTTTCA-AAACTTGGACCTGCCCTATCCTTTTGTTGCTTGTGCTATGAAGGCCAG----TGGAGGTCAGGCCACAGGTCAGTGC--CTGCAGGCTCAGTGAGGGGC--CAGGGCCCTATGAGTCC-TG-GTG-CCAGCAGGCA----GGGGCAGTTCTGAGACT--------------GGCCTCAGCAGGGCA---CCTGTGGGAGAGGAGACCCTAACCCCCTCAGGGAGGTAG-GGACAGAAAGG---CCCAGGTGTAGCCACCCTCT-GCCTGACGGAGTGGCTTCTGC-CCA-GCCCTGCAGTTCAAAGTAACCTTTTTCCTTATGTGACAGGGAGGAGAAA----------ATTCC----AGAAT--TTCT-ATGAAAGTCCAGGAG i otoGar3.GL873658 C 0 I 753 e mm10.chr12 90026707 1720 - 120129022 I e dasNov3.JH576208 1771038 3378 + 4416731 I e panPan2.chr2A 1398611 2013 + 114371477 I a score=1382639.000000 s hg38.chr2_KI270774v1_alt 165024 210 + 223625 AGCTGTTT-ACAAGGTTCAAGTGttttctttttctctttttgagaaagct-tctcctctatcacctaggcggaagtgcggtggtacaatcatagctcactgcagcctcaacctcctgggctcaagca-atcct-ccacctcagccacccaagtagctgggactacaggtgtacaccaccacacctggctaatttttaa-ttttt--taaattttttt- s panTro5.chr2A 1462223 205 + 111504155 AACTGTTTTACAAGGTTCAAGTGttttctttt-ctcttttgagaaaagcaatctcctctatcacccaggcggaagtgcggtggcacaatcatagctcactgcagcctca--ctacctggctcaagcacaatct-ccacctca-ccacc-aagtggctgggactacag-tgtacaccaccacacctggctaattttt---ttttt--aaaattttttg- i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1424786 210 + 1464242 AGCTGTTT-ACAAGGTTCAAGTGttttctttttctctttttgagaaagca-tctcctctatcacccaggcggaagtgcggtggcacaatcatagctcactgcagcctcaacctcctgggttcaagta-atcct-ccacctcagccacccaagtagctgggactacaggtgtacaccaccacacctggctaatttttaa-ttttt--taaaatttttt- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1147403 207 + 81552678 AGCTGTTT-ACGAGGTTCAAGTGTCttctttttctctttttgagaaagca-tctcctccatcacct----ggaagtgcagtggcacaatcatagctcactgcagcctcaacctcctgggctcaagca-atcctcccacctcagccgcccaagtagctgggactaagggtgtgcaccaccacacctggctaatttttaa-ttttt--aaaattttttt- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1476915 207 + 108979918 AGCTGTTT-ACAAGGTTCAAG-Gttttctttttctctttttgagaaggca-cctcctctatcacccaggcggaagtgcggtggcacagtcatagctcactgcagcctccacctcctgggctcaagc--atcctcccacctcagccacccgcatcgctgggacaacaggagtgcaccaccccgcctggctaatttttaa-ttttt--aaaatattt--- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1449363 207 - 111193037 AGCTGTTT-ACAAGGTTCAAG-Gttttctttttctctttttgagaaggca-cctcctctatcacccaggcggaagtgcggtggcacagtcatagctcactgcagcctccacctcctgggctcaagc--atcctcccacctcagccacccgcatcgctgggacaacaggagtgcaccaccccgcctggctaatttttaa-ttttt--aaaatattt--- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1477305 206 + 3644372 AGCTGTTT-ACAAGGTTCAAG-Gttttctttttctc-ttttgagaaggca-cctcctctatcacccaggcggaagtgcggtggcacagtcatagctcactgcagcctccacctcctgggctcaagc--atcctcccacctcagccacccgcatcgctgggacaacaggagtgcaccaccctgcctggctaatttttaa-ttttt--aaaatattt--- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1431951 209 - 10304083 AGCTGTTT-ACAAGATTCAAG-Gttttctttttctctttttgagaaggca-cctcctctctcacccaggcggaagtgcggtggcacagtcatagctcactgcagcctcaacctcctgggctcaagca-atccttccacctcagctgcccgcatccctgggacaacaggagtgcaccaccccgcctggctaatttttaatttttt--aaaatattt--- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1509240 210 - 107702431 AGCTGTTT-ACAAGGTTCAAG-Gttttctttttctttttttgagaaggca-cctcctctgtcacccaggcggaagtgcggtggcacagtcatagctcactgcagcctcaacctcctgggctcaagca-atcctcccacctcagctgcccgcgttgctgggacaacaggagtgcaccaccccgcctggctaatttttaa-tttttaaaaaatattt--- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 997474 209 - 2200435 AGCTGTTT-ACAAGGTTCAAG-Gttttctttttctctttttgagaaggca-cctcctctatcacccaggcgtaagtgcggtggcacagtcatagctcactgcagcctcaacctcctgggctcaagca-atcctcccacctcagccactcacatccctgggacaacaggagtgcaccaccgtgcctggctaatttttag-ttttt-ttaaatattt--- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1429787 210 - 13651311 AGCTGATT-ACAAGGTTCAAG-Gttttctttttctctttctgagaaggca-ccttctctatcacccaggcggaagtgcggtggcacggtcatagctcactgcagcctcaacctcctgggctcaagcc-atcctcgcgcctcagccgcccgcatccctgggacaacaggagtgcaccaccccgcctggctagtttttaa-tttttaaaaaatattt--- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1427874 201 - 108792865 AGCTGCTC-ACAAGATTTAAGTGttttctttt---------gagatcg-a-tctcctctgttacccaggctggagtgcagtggcacaatcacagctcactgcagcctcaacctcctgggctcaagca-atcctcccagctcagcctcctgagtaactgagactacaggtgtgcaccaccacacctggctagcatttaa-ttctt-taaaatgttt--t i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1256731 201 - 7082604 AGCTGCTC-ACAAGATTCAAGTGttttctttt---------gagatgg-a-tctcctctgtcacccaggctggagtgcagtggcacaatcacagctcactgcagcctcaacctcctgggctcgagca-atcctcccagctcagcctcctgagtaactgagactacaggtgtgcaccaccacacctggctagcatttaa-ttctt-taaaatgttt--t i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1350466 199 + 1864846 AGCTGCTC-ACAAGATTCAAGTGttttccttt---------gagatag-a-tctc--ctgtcacccaggctggagtgcagtggcacaatcacagcacactgcagcctcaacctcctgggcttgaaca-atcctcccccctcagcctcctgagtaactgagactacaggtgtgcaccaccacacctggctagcatttaa-ttctt-taagatgttt--t i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 169206 200 + 287728 AGCTGCTC-ACAAGATTCCAGTGttttctttt---------gagatag-a-tctcctctatcacccaggctggagtgcagtggcacaatctcagttcactgcagcctcaacctcct-ggctcaagca-atcctcccgcctcagcctcctgagtaactgagactacaggtgtgcaccaccacacctggctagcattcaa-ttctt-taaaatgttt--t i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90026707 1720 - 120129022 I e otoGar3.GL873658 947850 753 + 5252280 I e dasNov3.JH576208 1771038 3378 + 4416731 I e panPan2.chr2A 1398611 2013 + 114371477 I a score=1180670.000000 s hg38.chr2_KI270774v1_alt 165234 125 + 223625 gtagaaac--agagtctgactgtgttgcccaggctggtcttgatcttgggctcaagcaatcctcccactttggcctcccaaagtgctgggattacaggcgcaagccaccgcgcctgacTCAAGATTC s panTro5.chr2A 1462428 123 + 111504155 ttagaaac--agagtctgactatgttgcccaggctggtcttgatcttgggctcaagcaatcctcccactttggccctccaaagtgctgg-attacag-cacaagccaccgcgcctgacTCAAGATTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1400624 127 + 114371477 gtagaaacaaagagtctgactatgttgcccaggctggtcttgatcttgggctcaagcaatcctcccactttggcctcccaaagtgctgggattacaggcacaagccaccgcgcctgacTCAAGATTC i panPan2.chr2A I 2013 C 0 s gorGor5.CYUI01015607v1 1424996 123 + 1464242 gtagaaac--agagtctgactatgttgcccaggctggtcttgatcttgggctcaagcaatcctcccactttggcctcctaaag-gctgggattacaggcgcgagccaccg-gcctgacTCAAGATTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1147610 121 + 81552678 gtagaaac--agagt----ctatgttgcccaggctggtcttgatcttgggctcaagcaatcctcccaccttggcctcccaaagtgctaggattacaggcgtgagccaccatgcctgacTCAAGATTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1477122 125 + 108979918 gtagaaac--agagtctgactgtgttgcccaggctggtctcgctctcaggctcaagcagtcctctcaccttggcctcccaaaatgctgggattacaggcgtgagctaccacacccgacTCAAGATTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1449570 125 - 111193037 gtagaaac--agagtctgactgtgttgcccaggctggtctcgctctcaggctcaagcagtcctcccaccttggcctcccaaaatgctgggattacaggcgtgagctaccacacccgacTCAAGATTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1477511 125 + 3644372 gtagaaac--agagtctgactgtgttgcccaggctggtctcgctctcaggctcaagcagtcctcccaccttggcctcccaaaatgctgggattacaggcgtgagctaccacacccgacTCAAGATTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1432160 125 - 10304083 gtagaaat--agagtctgactgtgttgcccaggctggtctcgctctcgggctcaaccagtcctcccaccttggcctcccaaaatgctgggattacaggcgtgagctaccacgctcgacTCAAGATTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1509450 125 - 107702431 gtagaaac--agagtctgactgtgttgcccaggctggtctcgctctcgggctcaagcaatcctcccaccttggcctcccaaagtgctaggattacaggcgtgagctaccacgcccAACTCAAGATTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 997683 125 - 2200435 gtagaaac--agagtctgactgtgttgcccaggctggtctcgctctcgggctcaagcagtcctcccaccttggcctcccaaaatgctgggattacaggcgtgagctaccacgcccgacTCAAGATTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1429997 121 - 13651311 gtagaaac--agagt----ctgtgttgctcaggctggtcttgctctcgggctcaagcaatcctcccaccttggcctcccaaagtgctgagattacaggcatgagctaccatgcccgacTCAAGAATC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1428075 125 - 108792865 gtagaaac--agagtcagactgtgttgctcaggctggtctcaatctcagactcaaacaatcctcccaccttggcttcccaatatgctgggattacaggtgtgagccaccgcacctgacTCAAGATTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1256932 123 - 7082604 gtagaaac----agtcagactgtgttgctgaggctggtctcgatctcgggctcaagcaatcctcccaccttggcctcccaaaatgctgggattacaggcgtgagccaccacacctgacTCAAGATTC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1350665 125 + 1864846 gtagaaac--agagtcagactgtgttgctgaggctggtctcaatctcaggctcaagcaatcctcccaccttggcctcccaaaatgctgggattataggcgtgagccaccacgcctgacTCAAGATTC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 169406 125 + 287728 gtagaaac--agagtctgactgtgttgctgaggctggtctcaatctcaggctcaagcaatcctcccaccttggcctcccaaaatgctagggttacaggcgtgagccaccacacctgacTCAAGATTC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90026707 1720 - 120129022 I e otoGar3.GL873658 947850 753 + 5252280 I e dasNov3.JH576208 1771038 3378 + 4416731 I a score=1591297.000000 s hg38.chr2_KI270774v1_alt 165359 174 + 223625 AAGTTTTAAGGCCCCATTGGTCAGAACAATGGGTGCTTCTGCC-CAAC-CT--CGACGGCT---CCCAGGGGAGGCTGCAGTATCTGAG-CCAATCACTTACCAGGGATGTTTCAGATCAGATGA-GGAGGCAGTGGGGAAGAGGAGAGACACACTGTTCAGAGCTCTGGCAAGATCA-GACAC s panTro5.chr2A 1462551 167 + 111504155 AAGTTTCAGGGCCC-ATTGGTCAGAACAATGG---CTTCTGCC-CACCACT--CGACGGCT---CC-AGGGGAG-CTGCAGTATCTGAG-CCAATCACTTACCAGGGACGTTTCAGATCAGATGA-GGAGGCAGTGGG--AGAG-AGAGACACACTGTTCAGAGCTCTGGCAAGATCAAGACAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1400751 174 + 114371477 AAGTTTCAGGGCCCCATTGGTCAGAACAATGGGTGCTTCTGCC-CAAC-CT--CGACGGCT---CCCAGGGGAGGCTGCAGTATCTGAG-CCAATCACTTACCAGGGACGTTTCAGATCAGATGA-GGAGGCAGTGGGGAAGAGGAGAGACACACTGTTCAGAGCTCTGGCAAGATCA-GACAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1425119 174 + 1464242 AAGTTTTAAGGCCCCATTGGTCAGAACAATGGGTGCTTCTGCC-CAAC-CT--CGACGGCT---CCCAGGGGAGGCTGCAGTATCTGAC-CCAATCACTTACCAGGGACATTTCAGATCAGATGA-GGAGGCAGTGGGGAAGAGGAGAGACACACTGTTCAGAGCTCTGGCAAGATCA-GACAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1147731 176 + 81552678 AAGTTTTAAGGCCCCACTGGTCAGAACAAAGGGTGCTTCTGCC-CAAC-CTGAGGACGGCT---CCCAGGGGAGGCTACAGTATCTGAGCCCAATCACTTACCCGGGACATTTCAGATCAGATGA-GGAGCCAGTGGGGAAGAGGAGAGACACACTGTTCAGAGCTCTGGC-AGGTCG-GACAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1477247 173 + 108979918 AAGTTTTAAGGCCCTATTGGGTTGAACAAAGGGTGCTTCTGCC-CAAC-CT--CGACAGCT---CCCAGGGGAGGCTGCACTATCTGAGCCCAATCACTTACCAGGGACATTTCGGATCAGATGA-GGAGCCAGTGGGGAAGAGGAGAG--ACACTGTTCAGAGCTCTGGCAAGGTCA-GACAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1449695 173 - 111193037 AAGTTTTAAGGCCCTATTGGGTTGAACAAAGGGTGCTTCTGCC-CAAC-CT--CGACAGCT---CCCAGGGGAGGCTGCACTATCTGAGCCCAATCACTTACCAGGGACATTTCGGATCAGATGA-GGAGCCAGTGGGGAAGAGGAGAG--ACACTGTTCAGAGCTCTGGCAAGGTCA-GACAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1477636 173 + 3644372 AAGTTTTAAGGCCCTATTGGGTTGAACAAAGGGTGCTTCTGCC-CAAC-CT--CGACAGCT---CCCAGGGGAGGCTGCACTATCTGAGCCCAATCACTTACCAGGGACATTTCGGATCAGATGA-GGAGCCAGTGGGGAAGAGGAGAG--ACACTGTTCAGAGCTCTGGCAAGGTCA-GACAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1432285 175 - 10304083 AAGTTTTAAGGCCCTATTGGTCAGAACAAAGGGTGCTTCTGCC-CAAT-CT--CGACAGCT---CCCAGGGGAGGCTGCACTATCTGAGCCCAATCACTTACCGGGGACATCTCAGATCAGATGA-GGAGCCAGTGGGGAAGAGGAGAGACACACTGTTCAGAGCTCTGGCAAGATCA-GACAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1509575 174 - 107702431 AAGTTTTAAGGCCCTATTGGTCAGAACAAAGGGTGCTTCTGCC-CAAC-CT--CAACAGCT---CCCA-GGGAAGCTGCACTATCTGAGCCCAATCACTTACCGGGGACATCTCAGATCAGATGA-GAAGCCAGTGGGGAAGAGGAGAGACACACTGTTCAGAGCTCTGGCAAGATGA-GACAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 997808 175 - 2200435 AAGTTTTAAGGCCCTATTGGTCAGAACTAAGGGTGCTTCTGCC-CAAC-CT--CAACAGCT---CCCAGGGGAGGCTGCACTGTCTGAGCCCAATCACTTACCGGGGACATCTCAGATCAGATGA-GGAGCCAGTGGGGAAGAGGAGAGACACACTGTTCAGAGCTCTGGCAAGATCA-GACAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1430118 173 - 13651311 AAGTTTTAAGACCCTGTTGGTCAGAACAAAGGGTGCTTCTGCC-CAAC-CT--CGACAGCT---CCCAGGGGAGGCTGCAGTATCTGAGCCCAATCACTTACCGGGGACATTTCAGATCAGATGA-GGAGCCAGTGGGGAAGAGGAGAG--ACACTGTTCAGAGCTCTGGCAAGGTCA-GACAC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1428200 175 - 108792865 AAGTTTTTAGGCCCCATTGGTCAGAACAAAGGGTGCTTCTGCC-CAAC-CT--CGACAGCT---CCCAGGGGAGGTTGCAGGATCTGAGCCCAGTTGCTTACTGGGGATATGTCAGGTCAGATGG-GGAGGAAGCAGGGAAGAGGAGAGACACACCATTCAGAGCTCTGGCAAGCTTG-GACAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1257055 173 - 7082604 AAGTTTTTAGGCCCCACTGGTCAGAACAAAGGGTGCTTCTGCC-CAAC-CT--CAGCAGCT---CCCAGGGTAGGATGCAGGATCTGAGCCCAACTGCTTACTGGGGATATGTCAGGTCAGAGGA-GGAGCGAGCGGGGGAGGGGAGAG--ACACCGTTCAGAGCTCTGGCAAGCTGG-GACAC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1350790 175 + 1864846 AAGTTTTTAGGTCCCATTGGTCAGAATGAAGGGTCCTTCTGCC-CAAC-CT--CGACAGCT---CCCAGGGGAGGATGCGGGGTCTGAGCCCAACTGCTTACCGGCGTTATGTCAGGTCAGATGA-GGAGCGAGCGGGGAAGAGGAGAGACACACTGTTCAGAGCTCTGGAAAGCGTG-GACAC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 169531 173 + 287728 AAGTTTTTAGGCCCCATTGGTCAGAACAAA-GGTGCTTCTGCC-CAAC-CT--CGACAGCT---CCC-GGGGAGGTTGCAGGATCTGAGCCCAGTTGCTTACTGGGGTTATGTCAGGTCAGATGA-GGAGCGAGTGGGGAAGAGGAGAGAGACACCGTTCAGAGCTCTGGCAAGCTCG-GACAC i aotNan1.NW_018513311v1 C 0 I 30 s dasNov3.JH576208 1774416 176 + 4416731 AATCTTTAAAGTTCCATTGGTTAGAACAAATGATGCCTGTGCCTCTGC-CT--TGGCAGCTAGCCATGGGAGAGTTTCTGGAATTTTACCATAATATCTTACAATTGACATTTCTCATCCAACCATGGAGAAAGTGGTGAATAGGGGAAATGCACTTTTCAGATCTCTGACAAGGTCA-A---- i dasNov3.JH576208 I 3378 C 0 e mm10.chr12 90026707 1720 - 120129022 I e otoGar3.GL873658 947850 753 + 5252280 I a score=191440.000000 s hg38.chr2_KI270774v1_alt 165533 31 + 223625 TGAGGAAGTACAGTGTCTGTGAGGCTCTGAT s panTro5.chr2A 1462718 29 + 111504155 C-AGGAAGTGCAGTGTCTGTGAGG-TCTGAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1400925 29 + 114371477 --AGGAAGTGCAGTGTCTGTGAGGCTCTGAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1425293 31 + 1464242 TGAGGAAGTGCAGTGTCTGTGAGGCTCGGAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1147907 31 + 81552678 TGAGGAGGCGCAGTGTCTGCAAGGCTCTGAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1477420 31 + 108979918 CGAGGAGGCGCAGTGTCTGCGAGGCTCGGAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1449868 31 - 111193037 CGAGGAGGCGCAGTGTCTGCGAGGCTCGGAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1477809 31 + 3644372 CGAGGAGGCGCAGTGTCTGCGAGGCTCGGAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1432460 31 - 10304083 CGAGGAGGCGCAGTGTCTGCGAGGCTCGGAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1509749 31 - 107702431 CGAGGAGGCGCAGTGTCTGTGAGGCTCGGAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 997983 31 - 2200435 CGAGGAGGCGCAGTGTCTGCGAGGCTCGGAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1430291 31 - 13651311 CGAGGAGGCGCAGTGTCTGTGAGGCTCGGAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1428375 12 - 108792865 -------------------TGAGGATGGGTG i calJac3.chr14 C 0 I 1 s saiBol1.JH378218 1257228 29 - 7082604 --AGGAAGCGCAGCGTCCGCGAGGCTCGGCT i saiBol1.JH378218 C 0 I 1 s cebCap1.NW_016107827v1 1350965 31 + 1864846 TGAGGATGCACAGCATCCACGAGGCTCGGCT i cebCap1.NW_016107827v1 C 0 I 1 s dasNov3.JH576208 1774592 26 + 4416731 ----GATGCAAGAGGTATGTGAAA-TGTAAT i dasNov3.JH576208 C 0 I 6 e aotNan1.NW_018513311v1 169704 30 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e otoGar3.GL873658 947850 753 + 5252280 I a score=1418173.000000 s hg38.chr2_KI270774v1_alt 165564 179 + 223625 GAAGGGCGCAGGTTTCCTCTCTGTTAACAGCTAGCCGGGCACAGGTGGA-GC--TGCTGAACCTGAGGCTCA---GGCCTC---AGTTC-----TCTGCCTGTGCTTGCTGCATCCCCT--GGCTCACAA-GTCAAACTTCAGGCAGGCAAGAAGGGGAAGAGGTGTCTTCCTTAAAATAGCTTGCACTTGAATTT s panTro5.chr2A 1462747 142 + 111504155 GAAGGT--------------------------------GCGCAGGTGGACGC--TGCTGAACCTGAGGCTCA---GGC-TC---AGTTC-----TCTGCTTG--CTTGT--CATCCCCT--GGCTCACAACGTCAAACTTCAGGTAGGCAAGAAGGAGA-GAGGTGTCTTCCT-AAAATAACTTGCGCTTGAATTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1400954 146 + 114371477 GAAGG---------------------------------GCGCAGGTGGA-GC--TGCTGAACCTGAGGCTCA---GGCCTC---AGTTC-----TCTGCCTGTGCTTGCTGCATCCCCT--GGCTCACAA-GTCAAACTTCAGGTAGGCAAGAAGGGGAAGAGGTGTCTTCCTTAAGATAGCTTGCGCTTGAATTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1425324 178 + 1464242 GAAGGGCGCAGGTTTGCTCTCTGTTAGCAGCTGGCCG-GCACAGGTGGA-GC--TGCTGAACCTGAGGCTCA---GGCCTC---AGTTC-----TCTGCCTGTGCTTGCTGCATCCCCT--GGCTCACAA-GTCAAACTTCAGGTAGGCAAGAAGGGGAAGAGGTGTCTTCCTTAAAATAGCTTGCGCTTGAATTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1147938 179 + 81552678 GAAGGGCACAGGTCTG--CTCTGTCAGCAGCTGGCTGGGCATGGGT-GA-GC--TGCTGAACCTGAGGCTCA---GGCCTCAGGAGTTC-----TCTGCCTGTGCCTGCTGTACCCCCT--GGCTCACAA-GTCAAACTTCAAGTAGGCAAGAAGGGGAAGAGGTGTCTTCCTTAAAATAGCTTGCACTTGAATTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1477451 181 + 108979918 GAAGGGCACGGGTTTGCTCTCTGTTCGTAGCTGGTTGGGCACGGGTGGA-GC--TG-GGAACCTCAGGCTCA---GGCCTCAGGAGTTC-----TCTGTCTGTACTTGCTGCATCCCCT--GGCTCACAA-GTCAAACTTCAGGTAGGCAAGAAGGGAAAGTGGTGTCTTCCTTAAAATAGCTTGCACTTGAATTT i rheMac8.chr13 C 0 I 300 s macFas5.chr13 1449899 181 - 111193037 GAAGGGCACGGGTTTGCTCTCTGTTCGTAGCTGGTTGGGCACGGGTGGA-GC--TG-GGAACCTCAGGCTCA---GGCCTCAGGAGTTC-----TCTGTCTGTACTTGCTGCATCCCCT--GGCTCACAA-GTCAAACTTCAGGTAGGCAAGAAGGGAAAGTGGTGTCTTCCTTAAAATAGCTTGCACTTGAATTT i macFas5.chr13 C 0 I 300 s macNem1.NW_012011978v1 1477840 181 + 3644372 GAAGGGCACGGGTTTGCTCTCTGTTCGTAGCTGGTTGGGCACGGGTGGA-GC--TG-GGAACCTCAGGCTCA---GGCCTCAGGAGTTC-----TCTGTCTGTACTTGCTGCATCCCCT--GGCTCACAA-GTCAAACTTCAGGTAGGCAAGAAGGGAAAGAGGTGTCTTCCTTAAAATAGCTTGCACTTGAATTT i macNem1.NW_012011978v1 C 0 I 293 s cerAty1.NW_012000820v1 1432491 181 - 10304083 GAAGGGCACAGGTTTGCTCTCTATTCGTAGCTGGTTAGGCACGGGTGGA-GC--TG-GGAACCTCAGACTTA---GGCCTCAGGAGTGC-----TGTGTCTGTACTTGCTGCATCCCCT--GGCTCACAA-GTCAAACTTCAGGTAGGCAAGAAGGGAAAGAGGTGTCTTCCTTAAAATAGCTTGCACTTGAATTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1509780 181 - 107702431 GAAGGGCACGGGTTTGCTCTCTGTTCGTAGCTGGTTGGGCACGGGTGGA-GC--TG-GGAACCTCAGGCTTA---GGACTCAGGAGTTA-----TCTCTCTGTACTTGCTGCATCCCCT--GGCTCACAA-GTCAAACTTCAGGTAGGCAAGAAGGGGAAGAGGTGTCTTCCTTAAAATAGCTTGCACTTGAATTT i chlSab2.chr14 C 0 I 304 s manLeu1.NW_012103754v1 998014 181 - 2200435 GAAGGGCACGGGTTTGCTCTCTGTTCGTAGCTGGTTGGGCACAGGTGGA-GC--TG-GGAACCTCAGGCTTA---GGCCTCAGGAGTTA-----TCTGTCTGTACTTGCTGCATCCCCT--GGCTCACAA-GTCAAACTTCAGGTAGGCAAGAAGGGGAAGAGGTGTCTTCCTTAAAATAGCTTGCACTTGAATTT i manLeu1.NW_012103754v1 C 0 I 221 s colAng1.NW_012118821v1 1430322 181 - 13651311 GAAGGGCACGGGTTTGCTCTCTGTTCGTAGCTGGCTGGACACGGGTAGA-GC--TG-GGAACCTCAGGCTCA---GGCCTCAGGAGTTC-----TCTGTCTGTACTTGCTGCATCCCCT--GGCTCACAA-GTCAAACTTCAGGTAGGCAAGAAGGGGAAGAGGTGTCTTCCTTAAAATAGCTTGCACTTGAACTT i colAng1.NW_012118821v1 C 0 I 289 s calJac3.chr14 1428388 181 - 108792865 CA-GGGCGTGGGTCTGCTGTGTGTGAGCAGCTGGCTGGGCACGGGTGGA-GC--TGCTGAACCTGAGGCTCG---GGCGGCAGGAGTTC-----TCTGCCTGTGCTTGCTGCCGTCCCT--GCCTCACAA-GTCAAACTTCAGCTAGGCAAGAAGGGGAAGAGGTGTCTTCCTTAAAATAGCTTGCACTTGAATTT i calJac3.chr14 I 1 C 0 s saiBol1.JH378218 1257258 159 - 7082604 CACGGGCGTGGGTTTGCTGAGTGTGAGCAGCTGGCTGGGCACGCGTGGA-GC--TGCTGAGCCTGAGGCCCA---GGCGGCAGGA----------------------------GTCCCT--GCCTCACAA-GTCAAACTTCAGGTAGGCAAGGAGGGGAAGAGGTGTCGTCCTTAAAACAGCTTGCGCTTGAATGT i saiBol1.JH378218 I 1 C 0 s cebCap1.NW_016107827v1 1350997 159 + 1864846 AAAAGGCGTGGGTTTGCTGTGTGTGAGCAGCTGGCTGGGCACGGGTGGA-GC--TGCTGAACCTGAGGCTCA---GGCAGCAGGA----------------------------GTCCCT--GCCTCACAA-GTCAAACTTCAGGTAGGCAAGAAGGGGAAGAGGTGTCTTCCTTAAAACAGCTTGCGCTTGAATTT i cebCap1.NW_016107827v1 I 1 C 0 s aotNan1.NW_018513311v1 169734 182 + 287728 GAAGGGCGTGGGTTTGCTGTGTGTGAGCAGCTGGCTGGGCACGGGTGGC-GC--AGCTGAACCTGAGGCTCA---GGCGGCAGGAGTTC-----TCTGCCTGCGCTTGCTGCCGTCCCT--GCCTCACAA-GTCAAACTTCAGGTAGGCAAGAAGGGGAAGGGCGGTCTTCCTTAAAATAGCTCTCGCTTGAATTT i aotNan1.NW_018513311v1 I 30 C 0 s dasNov3.JH576208 1774624 184 + 4416731 AAAGGGCATTAGTTTGCTATTTGTGACT------CTGGGAATTAGAAGA-GCCATGACAACTTTTAAGAGCAAATGCTCTCAGGATTTCCTTTGTCACCCTGGGTTGGTTGCCATCCTTTGGGACCGCAA-ATTAAACTTTAGATAAAGGAGAAATGTAAGAGCTGTCTT----AAAGTAGTTTACACTTGAATTT i dasNov3.JH576208 I 6 C 0 e mm10.chr12 90026707 1720 - 120129022 I e otoGar3.GL873658 947850 753 + 5252280 I a score=105620.000000 s hg38.chr2_KI270774v1_alt 165743 11 + 223625 GAAATTGTCTC s panTro5.chr2A 1462889 10 + 111504155 GCAATTGT-TC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1401100 11 + 114371477 GAAATTGTCTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1425502 11 + 1464242 GAAATTGTCTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1148117 11 + 81552678 GAAATTGTCTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1477932 11 + 108979918 GAAATTGTCTC i rheMac8.chr13 I 300 C 0 s macFas5.chr13 1450380 11 - 111193037 GAAATTGTCTC i macFas5.chr13 I 300 C 0 s macNem1.NW_012011978v1 1478314 11 + 3644372 gaaaTTGTCTC i macNem1.NW_012011978v1 I 293 C 0 s cerAty1.NW_012000820v1 1432672 11 - 10304083 GAAATTGTCTC i cerAty1.NW_012000820v1 C 0 I 380 s chlSab2.chr14 1510265 11 - 107702431 GAAATTGTCTC i chlSab2.chr14 I 304 C 0 s manLeu1.NW_012103754v1 998416 11 - 2200435 gaaaTTGTCTG i manLeu1.NW_012103754v1 I 221 C 0 s colAng1.NW_012118821v1 1430792 11 - 13651311 gaaaTTGTCTC i colAng1.NW_012118821v1 I 289 C 0 s calJac3.chr14 1428569 11 - 108792865 GAAACTGCCTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1257417 11 - 7082604 GAAACTGCCTC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1351156 11 + 1864846 GAAACTGCCTC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 169916 11 + 287728 GAAACTGCCTC i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1774808 11 + 4416731 AAAGTTTTCTC i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90026707 1720 - 120129022 I e otoGar3.GL873658 947850 753 + 5252280 I a score=308377.000000 s hg38.chr2_KI270774v1_alt 165754 30 + 223625 -AGTCCCTGGGCTAAAA--AGAGAGAGG-CCTTT s panTro5.chr2A 1462899 33 + 111504155 -AGTCCCTGGGCTAAAAGTAGAGAGAGGGCCTTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1401111 30 + 114371477 -AGTCCCTGGGCTAAAA--AGAGAGAGG-CCTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1425513 29 + 1464242 -AGTCCCT-GGCTAAAA--AGAGAGAGG-CCTTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1148128 30 + 81552678 -AGTCCCTGGGCTAAAA--AGAGAGAGG-CCTTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1477943 30 + 108979918 -AGTCTCTGGGCTAAAG--AGAGAGAAG-CCTTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1450391 30 - 111193037 -AGTCTCTGGGCTAAAG--AGAGAGAGG-CCTTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1478325 30 + 3644372 -AGTCTCTGGGCTAAAG--AGAGAGAGG-CCTTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1433063 30 - 10304083 -AGTCTCTGGGCTAAAG--AGAGAGAGG-CCTTT i cerAty1.NW_012000820v1 I 380 C 0 s chlSab2.chr14 1510276 30 - 107702431 -AGTCTCTGGGCTAAAG--AGAGAGAGG-CCTTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 998427 30 - 2200435 -AGTCTCTGGGCTAAAG--AGAGAGAGG-CCTTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1430803 30 - 13651311 -AGTCTCTGGGCCAGAG--AGAGAGAGG-CCTTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1428580 30 - 108792865 -AGTCCCTGGGATGAAA--AGGGACAGG-CCTTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1257428 30 - 7082604 -AGTCCCTGGGCTGCAA--AGAGAGAGG-CCTTT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1351167 30 + 1864846 -AGTCCCTGGGCGGAAA--AGAGAGAGG-CCTTT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 169927 30 + 287728 -AGTCCCTGGGCTGAAA--AGAGAGAGG-CCTTT i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1774819 31 + 4416731 ATGTCCCTAGGCTGTAA--AGAGAGAGG-CCATT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90026707 1720 - 120129022 I e otoGar3.GL873658 947850 753 + 5252280 I a score=307690.000000 s hg38.chr2_KI270774v1_alt 165784 27 + 223625 TCCTTTCTATTGTAGTGAGAAGAAACC s panTro5.chr2A 1462932 26 + 111504155 TCCTTTCTTTTATAGTGA-AAGAAACC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1401141 27 + 114371477 TCCTTTCTTTTATAGTGAGAAGAAACC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1425542 27 + 1464242 TCCTTTCTATTGTAGTGAGAAGAAACC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1148158 27 + 81552678 TCCTTTCTATTGTAGTGAGAAGAAACC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1477973 27 + 108979918 TCCTTTCTATTGTAGTGAGAAGAAACC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1450421 27 - 111193037 TCCTTTCTATTGTAGTGAGAAGAAACC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1478355 27 + 3644372 TCCTTTCTATTGTAGTGAGAAGAAGCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1433093 27 - 10304083 TCCTTTCTATTGTAGTGAGAAGAAACC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1510306 27 - 107702431 TCCTTTCTATTGTAGTGAGAAGGAACC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 998457 27 - 2200435 TCCTTTCTATTGTAGTGAGAAGAAACC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1430833 27 - 13651311 TCCTTTCTATTGTAGTGAGAAGAAACC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1428610 27 - 108792865 TCCTTTCTAGTGTAGTGAAAAGACACT i calJac3.chr14 C 0 I 3 s saiBol1.JH378218 1257458 27 - 7082604 TCCTTTCTAGTGTAGTGAGAAGACACT i saiBol1.JH378218 C 0 I 3 s cebCap1.NW_016107827v1 1351197 27 + 1864846 TCCTTTCTAGTGTAGTGAGAAGACACT i cebCap1.NW_016107827v1 C 0 I 3 s aotNan1.NW_018513311v1 169957 27 + 287728 TCCTTTCTAGTGTAGTGAAAAGACACT i aotNan1.NW_018513311v1 C 0 I 95 s otoGar3.GL873658 948603 27 + 5252280 TCTCTTCTACTGTGGTGAGAAGAAACC i otoGar3.GL873658 I 753 C 0 s dasNov3.JH576208 1774850 26 + 4416731 -TCCCTCTACTGTAGTCAGAAGAAATC i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90026707 1720 - 120129022 I a score=6189.000000 s hg38.chr2_KI270774v1_alt 165811 1 + 223625 A s panTro5.chr2A 1462958 1 + 111504155 A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1401168 1 + 114371477 A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1425569 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1478000 1 + 108979918 A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1450448 1 - 111193037 A i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1478382 1 + 3644372 A i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1433120 1 - 10304083 A i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1510333 1 - 107702431 A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 998484 1 - 2200435 A i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1430860 1 - 13651311 A i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1428640 1 - 108792865 G i calJac3.chr14 I 3 C 0 s saiBol1.JH378218 1257488 1 - 7082604 G i saiBol1.JH378218 I 3 C 0 s cebCap1.NW_016107827v1 1351227 1 + 1864846 G i cebCap1.NW_016107827v1 I 3 C 0 s otoGar3.GL873658 948630 1 + 5252280 A i otoGar3.GL873658 C 0 I 1 s dasNov3.JH576208 1774876 1 + 4416731 A i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 169984 95 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e nomLeu3.chr19 1148185 0 + 81552678 C a score=247370.000000 s hg38.chr2_KI270774v1_alt 165812 28 + 223625 ---AAGAATGTTCCAGGGAACAGAAGGTGCT s panTro5.chr2A 1462959 26 + 111504155 ---A-GAATGTTC-AGGGAACAGAAGGTGCT i panTro5.chr2A C 0 I 18 s panPan2.chr2A 1401169 28 + 114371477 ---AAGAATGTTCCAGGGAACAGAAGGTGCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1425570 28 + 1464242 ---AAGAATGTTCCAGGGAACAGAAGGTGCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1148185 12 + 81552678 -------------------TCAGAAGGTGCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1478001 28 + 108979918 ---AAGAATGTTCCAGGGAGCAGAAGGTGCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1450449 28 - 111193037 ---AAGAATGTTCCAGGGAGCAGAAGGTGCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1478383 28 + 3644372 ---AAGAATGTTCCAGGGAGCAGAAGGTGCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1433121 28 - 10304083 ---AAGAATGTTCCAGGGAGCAGAAGGTGCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1510334 28 - 107702431 ---AAGAATGTTCCAGGGAGCAGAAGGTGCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 998485 28 - 2200435 ---AAGAATGTTCCAGGGAGCAGAAGGTGCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1430861 28 - 13651311 ---AAGAATATTCCAGGGAGCAGAAGGTGCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1428641 27 - 108792865 ---AAGAATGTTCCAGGGAACAG-AGGTGCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1257489 27 - 7082604 ---AAGAATGTTCCAGGGAACAG-AGGTGCT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1351228 27 + 1864846 ---AAGAATGTTCCAGGGAACAG-AGGTGCT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 170079 27 + 287728 ---AAGAATGTTCCAGGGAACAG-AGGTGCT i aotNan1.NW_018513311v1 I 95 C 0 s otoGar3.GL873658 948632 27 + 5252280 ---AGAGGCAGTGCAGGACTGAG-AGGGGCC i otoGar3.GL873658 I 1 I 1 s dasNov3.JH576208 1774877 31 + 4416731 AAGAAGAATATTAAAGAGAATAAAAGATGCT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90026707 1720 - 120129022 I a score=109244.000000 s hg38.chr2_KI270774v1_alt 165840 15 + 223625 GCCTGAGTTCTGAAT s panPan2.chr2A 1401197 15 + 114371477 GCCTGAGTTCTGAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1425598 15 + 1464242 GCCTGAGTTCTGAAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1148197 15 + 81552678 GCCTGAGTTCTGAAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1478029 15 + 108979918 GCCTGAGTTCTGAAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1450477 15 - 111193037 GCCTGAGTTCTGAAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1478411 15 + 3644372 GCCTGAGTTCTGAAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1433149 15 - 10304083 GCCTGAGTTCTGGAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1510362 15 - 107702431 GCCTGAGTTCTGAAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 998513 15 - 2200435 GCCTGAGTTCTGGAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1430889 15 - 13651311 GCCTGAGTTCTGAAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1428668 8 - 108792865 GCCTGAGC------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1257516 14 - 7082604 GCCTGAGTTCTCAA- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1351255 14 + 1864846 GCCTGAGTTCTGAA- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 170106 14 + 287728 GCCTGGGTTCTGAA- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 948660 9 + 5252280 ------TCTCTGGAC i otoGar3.GL873658 I 1 C 0 s dasNov3.JH576208 1774908 15 + 4416731 GCACATGTTCTGAAT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90026707 1720 - 120129022 I e panTro5.chr2A 1462985 18 + 111504155 I a score=835383.000000 s hg38.chr2_KI270774v1_alt 165855 106 + 223625 GTGGGAAG-CACACGGACCT----TCTCACGCGGTTAGGAGGAGCCCCTTGGACACCTGTGTGGTTCAGAAACGTTG-CCACATAAATTGCACCTGAGGTGGAGAGGCTGTT-- s panTro5.chr2A 1463003 100 + 111504155 ATGGGAAG-CACACGGACCT----TCTCA-GCGGTT-GGAGGAGCC--TTGGATACCTGTGTGGTTCAGAAATGTTGGCCACATAAATGCCACT--AGGATAAGAG-CTGTT-- i panTro5.chr2A I 18 C 0 s panPan2.chr2A 1401212 106 + 114371477 GTGGGAAG-CACACGGACCT----TCTCACGCGGTTAGGAGGAGCCCCTTGGACACCTGTGTGGCTCAGAAACGTTG-CCACATAAATTGCACCTGAGGTGGAGAGGCTGTT-- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1425613 104 + 1464242 GTGGGAAG-CACACGGACCT----TCTCACG-GGTTAGGAGGAGCCCCTTGGACACCTGTGTGGTT-AGAAATGTTG-CCACATAAATTGCACCTGAGGTGGAGAGGCTGTT-- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1148212 106 + 81552678 GTGGGAAG-GACACAGACCT----TCTCATGCAGTTGGGAGGAGCCCCTTGGACACCTGTGTGGTTCAGAAACGTTG-CCAAATAAATTGCACCTGAGGTGGAGAGGCTGTT-- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1478044 106 + 108979918 GTGGGAAG-AACACGGACCT----TCTCATGTGGCTAGGAGGAGCCCCCAGGACACCTGTGTGGTTCAGAAACGTTG-TCACATAAATTGCGCCTGAGGTGGAGAGGCTGTT-- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1450492 106 - 111193037 GTGGGAAG-AACACGGACCT----TCTCATGTGGCTAGGAGGAGCCCCCAGGACACCTGTGTGGTTCAGAAACGTTG-TCACATAAATTGCGCCTGAGGTGGAGAGGCTGTT-- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1478426 106 + 3644372 GTGGGAAG-AACACGGACCT----TCTCATGTGGCTAGGAGGAGCCCCCAGGACACCTGTGTGGTTCAGAAACGTTG-TCACATAAATTGCGCCTGAGGTGGAGAGGCTGTT-- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1433164 106 - 10304083 GTGGGAAG-AACACGGACCT----TCTCATGCGGCTAGGAGGAGCCCCCAGGACACCTGTGTGGTTCAGAAACGCTG-CCACATAAATTGCGCCTGAGGTGGAGAGGCTGTT-- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1510377 106 - 107702431 GTGGGAAG-CACATGGACCT----TCTCATGCGGCTGGGAGGAGGCCCCAGGACACCTGTGTGGTTCAGAAACGCTG-CCACATAAATTGCACCTGAGGTGGAGAGGCTGTT-- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 998528 105 - 2200435 GTGGGAAG-AACACAGACCT----TCTCATGCGGCTAGGAGGAGCCCCCAGGACACCTGTGTGGTTCAGAAACGCTG-CCACATAAATTGCGCCTGAGGTGGAG-GGCTGTT-- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1430904 89 - 13651311 GTGGGAAG-CACACGGACCT----TCTCATGCGGCT---AGGAGCCCCCAGGACACCTGTGTGGTTCAGAAACGCTG-CCACATAAATTGCGCCTGAG---------------- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1428676 90 - 108792865 -------------AGCACTT----CCTCATGCCATTAGGAGGAACCCTCA-GACACCTGTGTGGTTCAAAAACG----CCACATACATTGCAGCTGAGGTGGAGAGGCCATC-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1257530 101 - 7082604 -TGGGACG-TGCACGGACTT----CCTCATGCCGTTAGGAGGAACCCTCA-GACACCTGTGTGGTTCAGAAACG----CCCCATGCGTTGCAGCAGAGGTGGAGAGGCCGTC-- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1351269 101 + 1864846 -TGGGAAG-CTCATGGACCT----CCTTATGCCGTTAGGAGGAACCCGCA-GACCCCTGTGTGGTTCAGAAATG----CCACATACATTGCAGCTGAGGTGGAGAGGCCGTC-- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 170120 101 + 287728 -TGGGAAG-CGCACGGACCT----GCTTATGCCGTTAGGAGGAACCCTCA-GACGCCTGTGTGGTTCAGAAACG----CCACAGACATTGCAGCTGAGGTGGAGAGGCCGTC-- i aotNan1.NW_018513311v1 C 0 I 27 s otoGar3.GL873658 948669 107 + 5252280 --ATGAGA-GCCACTGACCTGACCTCCCCTGCTGTGGGGAAAAGTGGCCTGGCCATGAGTGTGGTCCAGAAACTTCACTCACATATATCACGTCTGCAGTGAA--GGCTCTT-- i otoGar3.GL873658 C 0 I 1 s dasNov3.JH576208 1774923 110 + 4416731 GTGAAAAGCCACATTAACCT----TATTGTCTCATCAGAAGAAGCCACTTTGATATATTTGTGGTCCAAAAACTATGCTCTTACAAATTGTATCTGAAATTGAGAAGCTGTGTC i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90026707 1720 - 120129022 I a score=7279.000000 s hg38.chr2_KI270774v1_alt 165961 1 + 223625 T s panTro5.chr2A 1463103 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1401318 1 + 114371477 T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1425717 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1148318 1 + 81552678 T i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1478150 1 + 108979918 T i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1450598 1 - 111193037 T i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1478532 1 + 3644372 T i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1433270 1 - 10304083 T i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1510483 1 - 107702431 T i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 998633 1 - 2200435 T i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1430993 1 - 13651311 T i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1428766 1 - 108792865 C i calJac3.chr14 C 0 I 1 s saiBol1.JH378218 1257631 1 - 7082604 C i saiBol1.JH378218 C 0 I 1 s cebCap1.NW_016107827v1 1351370 1 + 1864846 C i cebCap1.NW_016107827v1 C 0 I 22 s otoGar3.GL873658 948777 1 + 5252280 T i otoGar3.GL873658 I 1 C 0 s dasNov3.JH576208 1775033 1 + 4416731 T i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 170221 27 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I a score=126745.000000 s hg38.chr2_KI270774v1_alt 165962 23 + 223625 GCACGAT-GAAGTCGTG-CAACTAC s panTro5.chr2A 1463104 25 + 111504155 GCACGATCGAAGTCGTGGCAACTAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1401319 23 + 114371477 GCACGAT-GAAGTCGTG-CAACTAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1425718 23 + 1464242 GCACGAT-GAAGTCATG-CAACTAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1148319 21 + 81552678 GCACGAT-GAAGTCA---GAACTAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1478151 21 + 108979918 GCAGGAT-GAAGTCA---GAACTAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1450599 21 - 111193037 GCAGGAT-GAAGTCA---GAACTAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1478533 21 + 3644372 GCAGGAT-GAAGTCA---GAACTAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1433271 21 - 10304083 GCAGGAT-GAAGTCA---GAACTAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1510484 21 - 107702431 GCAGGAT-GAAGTCA---GAACTAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 998634 21 - 2200435 GCAGGAT-GAAGTCA---GAACTTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1430994 21 - 13651311 GCAGGAT-GAAGTCA---GAACTAC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1428768 21 - 108792865 GCCCGGT-GAAATCC---GAACTCC i calJac3.chr14 I 1 C 0 s saiBol1.JH378218 1257633 20 - 7082604 G-CCGGT-GAGATCC---GGACTCC i saiBol1.JH378218 I 1 C 0 s otoGar3.GL873658 948778 21 + 5252280 GCACAAC-AGAGTCA---GAACTAC i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1775034 21 + 4416731 GCATTAT-AAAATCA---TAACTAC i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 170221 27 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I e cebCap1.NW_016107827v1 1351371 22 + 1864846 I a score=11007.000000 s hg38.chr2_KI270774v1_alt 165985 6 + 223625 --TCTCTG s panTro5.chr2A 1463129 5 + 111504155 --T-TCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1401342 6 + 114371477 --TCTCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1425741 6 + 1464242 --TCTCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1148340 6 + 81552678 --TCTCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1478172 6 + 108979918 --TCTCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1450620 6 - 111193037 --TCTCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1478554 6 + 3644372 --TCTCTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1433292 3 - 10304083 --TCT--- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1510505 6 - 107702431 --TCTCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 998655 6 - 2200435 --TCTCTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1431015 6 - 13651311 --TCTCTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1428789 4 - 108792865 --TCTC-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1257653 4 - 7082604 --TCTC-- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1351393 4 + 1864846 --TCTG-- i cebCap1.NW_016107827v1 I 22 C 0 s otoGar3.GL873658 948799 4 + 5252280 ----TCTG i otoGar3.GL873658 C 0 I 2 s dasNov3.JH576208 1775055 6 + 4416731 TCTCTC-- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 170221 27 + 287728 I e mm10.chr12 90026707 1720 - 120129022 I a score=3639707.000000 s hg38.chr2_KI270774v1_alt 165991 387 + 223625 GGATGCTGACCCATAGCAC--AGTG-CTTGGCACCAATGGATGAA--CTAGCACAGGGACGGAAAC-CCCACTGGGAAACATTTGGATGCTGCCTTTTCCTCCTT--------------GTCTGTCCAGGT------------------------CTCCGAGGTGGAG--CGGGACAGC---------------------------GAGGGCAGG---TGCA-CCTTCAG-TGAAGGC------CCAGGCCACA---------CAAGAC-----TCA------CGGCT-CTCCCTGGT-CTCCCTGAAGGG-CCAAATTACGTGCTTAGGAAATGCATTCTGGCACATGGAAGAAACATATTACAAGTGT-GTAAATAATATTGGTTATTTTT-AAACAATCC-------------GCTTGCCTTCCTAAACTGG-TAAGCTAAAAGAGAAG-----------------ATTCATAT---TC-----TAGAA--------TTATTCCTA--TTATGCTTCATTTGGATGCAGTTTATTGACCAAA s panTro5.chr2A 1463134 386 + 111504155 GGACGCTGGACCATAGCAC--GGTG-CTTCTCAC-AATG-ATGAAAGCTAGCACAGG-ACGGAAAC-CCCACTGGGAAACATTTGGATACTGCCTTTTCCTCCT---------------GTCTGTCCAGGT------------------------CTCCGAGGTGGAGG-CGGGACAGC---------------------------GAGGGCAGG---TGCA-CCTTCA--TGAAGGC------C-AGGCCACA---------CAAGAC-----TCA------CGGCT-CTCCCTGGTTCTCCCTGAAGGGACCAAATTACGTGCTTAGGAAATGCATTCTGGCACATG-AAGAAACATATTACAAGTGTAGTAAATAATATTGGTTATTTTTTAAACAATTC-------------GCTTGCCTTCCTAAACTGGCTAAGCTAAAAGAGAAG-----------------ATT-ATGT---TC-----TAGAA--------TTATTC-TA--TTATACTTCATTTGGATGCAGTTTATTGACCAAA i panTro5.chr2A C 0 I 54 s panPan2.chr2A 1401348 387 + 114371477 GGACGCTGACCCATAGCAC--GGTG-CTTCTCACCAATGGATGAA--CTAGCACAGGGACGGAAAC-CCCACTGGGAAACATTTGGATGCTGCCTTTTCCTCCTT--------------GTCTGTCCAGGT------------------------CTCCGAGGTGGAG--CGGGACAGC---------------------------GAGGGCAGG---TGCA-CCTTCAG-TGAAGGC------CCAGGCCACA---------CAAGAC-----TCA------CGGCT-CTCCCTGGT-CTCCCTGAAGGA-CCAAATTACGTGCTTAGGAAATGCATTCTGGCACATGGAAGAAACATATTACAAGTGT-GTAAATAATATTGGTTATTTTT-AAACAATTT-------------GCTTGCCTTCCTAAAGTGG-CAAGCTAAAAGAGAAG-----------------ATTCATAT---TC-----TAGAA--------TTATTCCTA--TTATACTTCATTTGGATGCAGTTTATTGACCAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1425747 385 + 1464242 GGACGCTGACCCATAGCAC--GGTG-CTTCTCACCAATGGATGAA--CTAGCACAGGGACGGAAAC-CCCACTGGGAAACATTTGGATGCTGCCTTTTCCTCCTT--------------GTCTGTCCAGGT------------------------CTCCGAGGTGGAG--CGGGACAGC---------------------------GAGGGCAGG---TGCA-CCTTCA--TGAAGGC------CCAGGCCACA---------CAAGAC-----TCA------CGGCT-CTCCCTGGT-CTCCCTGAAGGG-CCAAATTACGTGCTTAGGAAATGCATTCTGGCACATGGAAGAAACATATTACAAGTGT-GTAAATAATA-TGGTTATTTTT-AAACAATCC-------------ACTTGCCTTCCTAAACTGG-TAAGCTAAAAGAGAAG-----------------ATTCATAT---TC-----TAGAA--------TTATTCCTA--TTATACTTCATTTGGATGCAGTTTATTGACCAAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1148346 388 + 81552678 GGACGCTGACCCATAGCAC--GATG-CTTCTCACCAGTGGATGAA--CTAGCACAAGGATGGAAAC-CCCACAGGGAAACATTTGGATGCTGCCTTTTCCTCCTT--------------GTCTGTCCAGGT------------------------CTCCGAGGTGGAG--CAGGACAGCG--------------------------GGGGGCAGG---TGCG-CCCTCGG-TAAAGGC------CCAGACCACA---------CAAGAC-----TCA------CAGCT-CTCCCTGGT-CTCCCTGAAGGG-CCAAATTATGTGCTTAGGAAATGCATTCTGACACCTGGAAGGAACATATTACAAGTGT-GTAAATAATATTGGTTATTTTT-AAACAATCT-------------GCTTGCCTTCCTAAACTGG-TAAGCTAAAAGAGAAG-----------------ATTCATAT---TC-----TAGAA--------TTATTCCTA--TTATATTTCATTTGGATGCAGTTTATTGACCAAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1478178 388 + 108979918 GGATGCTGACCCATAGCAT--GGTG-CTTCTCACCAATGGATGAA--CTAGCACACGGACGGAAAC-CCCACTGGGGAACTTTTGGATGCCGCCTTTTCCTTCTT--------------GTCTGTCCAGGT------------------------CTCCGAGGTGGAG--CGGGACAGCG--------------------------GGGAGCAGG---TGCG-CCCTCAG-TAAACGC------CCAGGCCACA---------CAAGAC-----TCA------TAGCT-CTCCCTGGT-CTCCCTGAAGGG-CCAAATTACGTGCTTAGGAAATGCATTCTGGCGCCTGGAAGGAACATATTACAAGTGT-GTAAATAATATTGGTTATTTTT-AAACAATCT-------------GCTTGCCTTCCTAAACTGG-TAAGCTAAAAGAGAAG-----------------ATTCATAT---TC-----TAGAA--------TTATGCCTA--TTATGCTTCATTTGGATGTAGTTTATTGACCAAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1450626 388 - 111193037 GGATGCTGACCCATAGCAC--GGTG-CTTCTCACCAATGGATGAA--CTAGCACACGGACGGAAAC-CCCACTGGGGAACTTTTGGATGCCGCCTTTTCCTTCTT--------------GTCTGTCCAGGT------------------------CTCCGAGGTGGAG--CGGGACAGCG--------------------------GGGAGCAGG---TGCG-CCCTCAG-TAAACGC------CCAGGCCACA---------CAAGAC-----TCA------TAGCT-CTCCCTGGT-CTCCCTGAAGGG-CCAAATTACGTGCTTAGGAAATGCATTCTGGCGCCTGGAAGGAACATATTACAAGTGT-GTAAATAATATTGGTTATTTTT-AAACAATCT-------------GCTTGCCTTCCTAAACTGG-TAAGCTAAAAGAGAAG-----------------ATTCATAT---TC-----TAGAA--------TTATGCCTA--TTATGCTTCATTTGGATGTAGTTTATTGACCAAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1478560 388 + 3644372 GGATGCTGACCCATAGCAC--GGTG-CTTCTCACCAATGGATGAA--CTAGCACACGGACGGAAAC-CCCACTGGGGAACTTTTGGATGCCGCCTTTTCCTTCTT--------------GTCTGTCCAGGT------------------------CTCCGAGGTGGAG--CGGGACAGCG--------------------------GGGAGCAGG---TGCG-CCCTCAG-TAAATGC------CCAGGCCACA---------CAAGAC-----TCA------TAGCT-CTCCCTGGT-CTCCCTGAAGGG-CCAAATTACGTGCTTAGGAAATGCATTCTGGCGCCTGGAAGGAACATATTACAAGTGT-GTAAATAATATTGGTTATTTTT-AAACAATCT-------------GCTTGCCTTCCTAAACTGG-TAAGCTAAAAGAGAAG-----------------ATTCATAT---TC-----TAGAA--------TTATGCCTA--TTATGCTTCATTTGGATGTAGTTTATTGACCAAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1433295 383 - 10304083 -----CTGACCCATGGCAC--GATG-CTTCTCACCAATGGATGAA--CTAGCTCAGGAACGGAAAC-CCCACTGGGGAACTTTTGGATGCCGCCTTTTCCTTCTT--------------GTCTGTCCAGGT------------------------CTCCGAGGTGGAG--CGGGACAGCG--------------------------GGGAGCAGG---TGCA-CCCTCAG-TAAACGC------CCAGGCCACA---------CAAGAC-----TCA------TAGCT-CTCCCTGGT-CTCCCTGAAGGG-CCAAATTACGTGCTTAGGAAATGCATTCTGGCGCCTGGAAGGAACATATTACAAGTGT-ATAAATAATATTGGTTATTTTT-AAACAATCT-------------GCTTGCTTTCCTAAACTGG-TAAGCTAAAAGAGAAG-----------------ATTCATAT---TC-----TAGAA--------TTATGCCTA--TTATGCTTCATTTGGATGTAGTTTATTGACCAAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1510511 387 - 107702431 GGATGCTGACCCTTAGCAC--GGTG-CTTCTCACCAATGGATGAA--CTAGCACAGGGACGGAAAC-CCCACT-GGGAACTTTTGGATGCCGCCTTTTCCTTCTT--------------ATCTGTCCAGGT------------------------CTCCGAGGTGGAG--CGGGACAGCG--------------------------GGGAGCAGG---TGTG-CCCTCAG-TAAACGC------CCAGGCCACA---------CAAGAC-----TCA------TAGCT-CTCCCTGGT-CTCCCTGAAGGG-CCAAATTACGTGCTTAGGAAATGCATTCTGGCACCTGGAAGGAACATATTACAAGTGT-GTAAATAATATTGGTTATTTTT-AAACAATCT-------------GCTTGCCTTCCTAAACTGG-TAAGCTAAAAGAGAAG-----------------ATTCATAT---TC-----TAGAA--------TTATGCCTG--TTATGCTTCATTTGGATGTAGTTTATTGACCAAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 998661 388 - 2200435 GGATGCTGACCCATAGCAC--GGTG-CTTCTCACCAATGGATGAA--CTAGCACAGGACCGGAAAC-CCCACTGGGGAACATTTGGATGCCGCCTTTTCCTTCTT--------------GTCTGTCCAGGT------------------------CTCCGAGGTGGAG--CGGGACAGCG--------------------------GGGAGCAGG---TGCA-CCCTCAG-TAAACGC------CCAGGCCACA---------CAAGAC-----TCA------TAGCT-CTCCCTGGT-CTCCCTGAAGGG-CCAAATTACATGCTTAGGAAATGCATTCTGGCGCCTGGAAGGAACATATTACAAGTGT-ATAAATAATATTGGTTATTTTT-AAACAATCT-------------GCTTGCCTTCCTAAACTTG-TAAGCTAAAAGAGAAG-----------------ATTCATAT---TC-----TAGAA--------TTATGCCTA--TTATGCTTCATTTGGATGTAGTTTATTGACCAAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1431021 390 - 13651311 GGATGCTGACCCATAGCACGGGGTG-CTTCTCACCAGTGGATGAA--CTAGCACAGGGACAGAAAC-CCCACTGGGGAACATTTGGATGCCGCCTTTTCCTTCTT--------------GTCTGTCCAGGT------------------------CTCTGAGGTGGAG--CGGGACAGCG--------------------------GGGAGCAGG---TGCA-CCCTCAG-TAAATGC------CCAGGCCCCA---------CAAGAC-----TCA------TAGCT-CTCCCTGGT-CTCCCCAAAGGG-CCAAATTACGTGCTTAGGAAATGCATTCTGGCACCTGGAAGGAACATATTACAAGTGT-GTAAATAATTTTGGTTATTTTT-AAACAATCT-------------GCTTGCCTTCCTAAACTGG-TAAGCTAAAAGAGAAG-----------------ATTCATAT---TC-----TAGAA--------TTATGCCCA--TTATGCTTCATTTGGATGTAGTTTATTGACCAAA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1428793 391 - 108792865 AAACGCTGACCCATCACAC--GGTG-CTTCTCACCGATGGAGGAA--CCAGCGCAGGGATGGGAAC-CCACCTGGGAAACATTTGGATGCCGGCTTTTCCTCCTC--------------GTTCGTCTGGGT------------------------CTCTGGGGTAGAG--CGGGACAGCA--------------------------GAGACCAGG---TGTG-CCCTCTG-TGAAGGC------CCAGGCCACA---------TGGGAC-----TCA------CGGCT-CTCCCTGGT-CTCCCTGAAGGG-CC--ATTAGGTGCTTAGGAAATTCATTCTGTCATCTGGAGGGAACATGGTACAAGTGT-GTAAATAACATTTGTTATTTTT-AAACAATCC-------------GCATGCCTTCCTAACCTGG-TAAGCTAAAACAGAAG-----------------ATTCATAT---TG-----TAGAATAGA---GTTATTCCTA--TTATGTTTCATTTTGATGTGGCTTATTGACCAAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1257657 381 - 7082604 GAACGCTGACCCGTCACAC--GGTG-CTTCTCACCGATGGAGGAA--CTAGCGCA-GGACGGAAAC-CCAGCTGGGAAACGTTTGGATGCAGGCGTTTCCTCCTT--------------GTCTGTCCTGGT------------------------CTCCGAGGTGCAG--CGGGACGGCA--------------------------GGGAGCAGG---CGCG-CCCTATG-CGAAGGC------CCAGGCCACA---------CGGGAC-----CCA------CGGC----------T-CTCCCTGAAGGG-CC--GTTAGGTGCTTAGGAAATGCATTCTGTCATCTGGAGGGAACACAGTGCGAGTGT-GTAAATGACATTTGTTATTTTT-AAACAATCT-------------GCGTGCCTTCCTAAACCGG-TAAGCTAAAACAGAAG-----------------ATTCATGT---GG-----TAGAATAGA---GTTATTCCTA--TTATGTTTCATTTTGATGTGGCTTATTGACCAAA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1351397 388 + 1864846 GAACGCTGACCCATCACAT--GGTG-CCTCTCACCGATGGAGGAA--CTAGTGCAGGGACGGAAAC-CTAGCTGGGAAACGTTTGGATGCAGGCTTTTCCTCCTC--------------ATCCGTCCAGGT------------------------CTCCGAGGTGGAG--CGGGATGGCA--------------------------GGGAGCAGG---TGCG-CCCTCTG-TGAAAGC------CCAGGCCACA---------CGGGAC-----CCA------CGGCT-CTCCCTGGT-CTCCCTGAAGGG-CC--ATTAGGTGCTTAGGAAGTGCACTCTGTCATCTGGAGGGAACATAGTACAAGTGT-GTAAATAACGTTTGTTATTTTT--AACAATCC-------------GCGTGCCTTCCTAAACTGG-TAAGCTAAAACAGAAG-----------------ATTCATAT---TG-----TGGAATAGA---GTTATTCCTA--T--TGTTTCATTTCGATGTGGCTTATTGACCAAA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 170248 389 + 287728 AAACGCTGAGCCACCACAC--GGTG-CTTCTCACCGACGGAGGAA--CTAGCGCAGGGACGGAAAC-CCAGCTGGGAAACGTTGGGATGCAGGCTTTTCC-CCTC--------------GTTCGTCCAGGT------------------------CTCCGA-GTGGAG--CGGGACGGCA--------------------------GGGAGCAGG---TGCG-CGCTCTG-CGAAGGC------CCAGGCCACA---------CGGGAC-----TCA------CGGCT-CTCCCTGGT-CTCCCTGAAGGG-CC--ATTAGGTGCTTAGGAAACGCATTCTGTCATCTGGAGGGAACACAGTACAAGTGT-GTGAATAACATTTGCTATTTTT-AAACAATCC-------------ACGTGCCTTCCTAAACTGG-TAAGCTAAAACACAGG-----------------ATTCACAC---TG-----TAGAATAGA---GTTATTCCTA--TTACGTTTCATTTCAATGTGACTTATTGACCAAA i aotNan1.NW_018513311v1 I 27 C 0 s otoGar3.GL873658 948805 461 + 5252280 -GATGCTGATGTATGATAT-GGGCA-CATGTCACCAATGGGTGAG--CCAACAGAAGGACTAAAGC-CTGGTCTGGGGGCTCCTGGACACAGACTTCCTCTCCCTCATGTCCTCTATGGGGCTGTCTGGATGGCGCCTTCCATACCCCATGTCCACTCTGGGG-ATAT--CTGGACAGAGCATTCCTTTCCCCCATACCCTGGTTTCAGAGCAGG---TGGGACCACCAG-GGGATCC------ATTAACTATAGACAGAAGCCGGGAA-----ACAACAACTTAGCC-ACCGTGGGC-CCCTGCAAAGTC-CCAAATTATGTGCTTAGGAAATGCATTTTATCATTTGGAAGGAATATATGACGAGCAT-ATAAATTGT--------TTTTT-AAACAACGT-------------GCTTGCCTTCCTGCATGGA-TAGCC---AAGATAAG-----------------ACTCGTGT---TCCTGTATAGAA--------TCTTTCCTA--TTCCCTTTCATTCTGATTCAGTCTATTGACCAAA i otoGar3.GL873658 I 2 C 0 s dasNov3.JH576208 1775061 403 + 4416731 TAATGCTGATTTTTAGCTT--GGTGACTTCTCACTGATCAATGGA--CCAGCACAGAGATTGAAACATCAGTTCAGAACCATTTGAATAGGCCCTTTCATTGATT--------------GTATGTCCGGGT------------------------CTTGAAGGTGAAAGTTTGCATAGTGC-------------------------TGGGATAGGATTTAGT-CCTTCAGCTGGAGGCAGAAAGCCAGGCAAC----------CAAATCTCTTTTCA------TTGCTGGTTCCTGGT-CTT--TAAAATA-CCAATTTA-----------------------------------------------TAT-GTAAATAATATTTGTTATTTTTTAAGCAATCTAAGAGCCATAATAGTTTGCCTTTCTAAACAGA-TAGGCTAAAATATAAGGCCTTTCCAAGACTTTTGTTCATTTGTCTT-----TAGGAGACAATCATTACTCTTGGTTTATGCCTCATTTTGATGCAGTTTATTGACCAAA i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90026707 1720 - 120129022 I a score=652234.000000 s hg38.chr2_KI270774v1_alt 166378 59 + 223625 ATATTCCCCTTAAATACCAAAACAACTTGACACTGATTTTTCTGTCTGAAAGAAACACT s panTro5.chr2A 110052552 59 - 111504155 ATATTCCCCTTAAATACCAAAACAACTTGACACTGATTTTTCTGTCTGAAAGAAACACT i panTro5.chr2A I 2868 T 45254 s panPan2.chr2A 1401735 59 + 114371477 ATATTCCCCTTAAATACCAAAACAACTTGACACTGATTTTTCTGTCTGAAAGAAACACT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1426132 59 + 1464242 ATATTCCCCTTAAATACCAAAACAACTTGACACTGATTTTTCTGTCTGAAAGAAACACT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1148734 59 + 81552678 ATATTCCCCTTAAATACCAAAACAACTTGACACTGATTTTTCTGTCTGAAAGAAACACT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1478566 59 + 108979918 ATATTCCCCTTAAATACCAAAACAATTTGAGACTGATTTTTCTGTCTGAAAGAAACACT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1451014 59 - 111193037 ATATTCCCCTTAAATACCAAAACAATTTGAGACTGATTTTTCTGTCTGAAAGAAACACT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1478948 59 + 3644372 ATATTCCCCTTAAATACCAAAACAATTTGAGACTGATTTTTCTGTCTGAAAGAAACACT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1433678 59 - 10304083 ATATTCCCCTTAAATACCAAAACAATTTGAGACTGATTTTTCTGTCTGAAAGAAACACT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1510898 59 - 107702431 ATATTCCCCTTAAATACCAAAACAATTTGAGACTGATTTTTCTGTCTGAAAGAAACACT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 999049 59 - 2200435 ATATTCCCCTTAAATACCAAAACAATTTGAGACTGATTTTTCTGTCTGAAAGAAACACT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1431411 59 - 13651311 ATATTCCCCTTAAATACCAAAACAATTTGAGACTGATTATTCTGTCTGAAAGAAACACT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1429184 58 - 108792865 ATACTCCCC-TAAATACCAAAACAATTTGACATTGCTTTTTCTGACTGAAAGAAACACT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1258038 58 - 7082604 ATACTCCCC-TAAATACCAAAACAATTTGACATTGGTTTTTCTGTCTGAAAGAAACACT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1351785 58 + 1864846 ATACTCCCC-TAAATACCAAAACAATTTGACGTTGGTTTTTCTGTCTGAAAGAAACACT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 170637 58 + 287728 AGACTCCCC-TAAATACCAAAACAATTTGACATTGGTTTTTCTGTCTGAAAGCAACAGT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 949266 58 + 5252280 ATGTCCTCCATAAACACCAAAACCCCTCAACACTGACTTTTCTGGCTGAAA-AAATATT i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1775464 55 + 4416731 ATATTCTCTTTAAAACACAAAACAAATCGACACTAATTTATACAGCTGAAA----TATT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90026707 1720 - 120129022 I a score=1622045.000000 s hg38.chr2_KI270774v1_alt 166437 174 + 223625 GTTAAACCTGAAAGTAGAATCTTGGTACATAATTCTCCTGGG-ACCATGTATCAAATCGTAATTTC----CAGGCCCTGTGAt-tgcaactgtaattttccatcgacagagctctctgccata-caacatgctttgatttaatcctcacaaaggctctgggaattaggtattattgttgc-t s panTro5.chr2A 1463574 168 + 111504155 GTTAAAC-TGAA--TA-AATCTTGGTACATAATTCTCCTGGG---CATGTGTCAAATCGTAATTTC----CAGGCCCTGTGATATGCAACTGTATATTTCCATCGACAGAGCTCTCTGCCATAACAacatgctttgatttaatcctcacaa-ggctctgg-aattag-tattagtgttgcct i panTro5.chr2A I 54 C 0 s panPan2.chr2A 1401794 174 + 114371477 GTTAAACCTGAAAGTAGAATCTTGGTACATAATTCTCCTGGG-ACCATGTGTCAAATCGTAATTTC----CAGGCCCTGTGAt-tgcaactgtaattttccatcgacagagctctctgccata-caacatgctttgatttaatcctcacaaaggctctgggaattaggtattagtgttgc-t i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1426191 174 + 1464242 GTTAAACCTGAAAGTAGAATCTTGGTACATAATTCTCCTGGG-ACCATGTGTCAAATCGTAATTTC----CAGGCCCTGTGAt-tgcaactgtaattttccatcgacagagctctctgccgta-taacatgctttgatttaatcctcacaaaggctctgggaattaggtattattgttgc-t i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1148793 178 + 81552678 GTTAAACCTGAAAGTAGAATCTTGGTACATAATTCTCCTGGG-ACCATGTGTCAACTCGTAATTTCCAGGCAGGCCCTATGAt-tgcaactgtaattttccattgacagagctctctgccgta-caacatgctttgatttaatcctcacgaaggctctaggaattaggtatcattgttgc-t i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1478625 170 + 108979918 GTTAAACCTGAAAGTAGAATCTTTGTACGTAATTCTCCTGGG-GCCATGTGTCAAATCGTAATTTC----CAGGCCCTGCGAT-TGC-ACTGTAATTGTCCATTGACAGACCTctgtgccaaa-caacatgctttgatttaatcctcacaaaggctctaggaattaggtgt---tgttgc-t i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1451073 170 - 111193037 GTTAAACCTGAAAGTAGAATCTTTGTACGTAATTCTCCTGGG-GCCATGTGTCAAATCGTAATTTC----CAGGCCCTGCGAT-TGC-ACTGTAATTGTCCATTGACAGACCTctgtgccaaa-caacatgctttgatttaatcctcacaaaggctctaggaattaggtgt---tgttgc-t i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1479007 170 + 3644372 GTTAAACCTGAAAGTAGAATCTTTGTACGTAATTCTCCTGGG-GCCATGTGTCAAATAGTAATTTC----CAGGCCCTGCGAT-TGC-ACTGTAATTGTCCATTGACAGACCTctgtgccaaa-caacatgctttgatttaatcctcacaaaggctctaggaattaggtgt---tgttgc-t i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1433737 170 - 10304083 GTTAAACCTGAAAGTAGAATCTTTGTACGTAATTCTCCTGGG-GCCATGTGTCAAATCATAATTTC----CAGGCCCTGCGAT-TGC-ACTGTAATTTTCCATtgacagagctctgtgccaaa-caacatgctttgatttaatcctcacagaggctctaggaattaggtgt---tgttgc-t i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1510957 170 - 107702431 GTTAAACCTGAAAGTAGAATCTTTGTACGTAATTCTCCTGGG-GCCATGTGTCAAATCGTAATTTC----CAGGccctgcgat-tgc-actgtaattttccattgacagagctctgtgccaaa-caacatgctttgatttaatcctcacaaaggctctaggaattaggtat---tgttgc-t i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 999108 170 - 2200435 GTTAAACCTGAAAGTAGAATCTTTGTACGTAATTCTCCTGGG-GCCATGTGTCAAATCATAATTTC----CAGGCCCTGCGAT-TGC-ACTGTAATTTTCCATtgacagagctctgtgccaaa-caacatgctttgatttaatcctcacagaggctctaggaattaggtgt---tgttgc-t i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1431470 170 - 13651311 GTTAAACCTGAAAGTAGAATCTTTGTACATAATTCTCCTGGG-GCCATGTGTCAAATTGTAATTTC----CAGGccctgcgat-tgc-actgcaattttccattgacagagctctgtgccaaa-caacatgctttgatttaatcctcacaaaggttctaggaattaggtat---tgttgc-t i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1429242 152 - 108792865 GTGAAACCTGAAAGTAGGATATTTGTACGTAATTCTCCTGGG-ACCACGTTGAAAATCACAATTTC----CAGACCCCATGAC-TGC-CCTGTAGCTTCCCGCTGACAGAGGTCTGTGCCATA-CA---------------------ACAAAGGCTCTAGGAATTCGGTATTATTGTTGC-C i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1258096 172 - 7082604 GTCAAACCTGAAACTAGGATCTTTGCCC-TAATTCTCCTGGG-ACCACGTGTGAAATCGTAATTTC----TAGACCCCATGAC-TGC-ACTGTAATTTCCTGCTGACAGAGGTCTGTGCCATA-CAAGAGGCTTTAGtttaatcctcacaaaggctccaggaattaggaattattgttgc-t i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1351843 172 + 1864846 GTCAAACCTGAAACTAGGATCTTTGTCC-TAATTCTCCTGGG-ACCACGTGTGAAATCGTGATTTC----TGGACCCCGTGAC-TGC-ACTGTAATTTCCTGCTGACAGAGGTCTGTGCCATA-CAACAGGCTTTGGtttaatcctcacaaaggctctaggaattaggtattatttttgc-t i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 170695 170 + 287728 GTCAAACCTGAAAGCAGGATCTTTGTACGTAATTCTCCTGGG-ACCACGTGTGAAATTGTAATTTC----CAGACCCCATGAC-TGC-ACTGTAATTTCCCGCTGACAAAGGTCTGTGCCACA-CAACAGGCTTTGGTTTCATCTTCACAAAGGCTCTAGGAATTAGG---TATTGTTGC-T i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 949324 168 + 5252280 TTAAAATCTAGAAGCAGAATCTGTACACATTATTCTCCTGAG-ACCAGGTATCAAATGGTAATTTC----AGGACCCTGTGAC-TGC-TATG-ATTTTTCCATAGACGGAgtgctgtgct-ca-cagtatgttctgattcagccctcacaa--gctctgggaatcaag-acgattatcac-t i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1775519 174 + 4416731 GTTAAGCCTAAAACCAGACTCCTTGTGCATAATTCTTCTGGGAACTGTTTGTCCCATAGTAATTAC----AAGACCCTACGAT-TAT-GCCACAATTTCCCACTGACATagcactttagcatc-cctggttctttgagttaatcttcacaaaaactccaggagccaggtattTTGGGGGC-T i dasNov3.JH576208 C 0 I 67 e mm10.chr12 90026707 1720 - 120129022 I a score=941504.000000 s hg38.chr2_KI270774v1_alt 166611 104 + 223625 ttgtagaaaaaggaactgCTCCCCACTGTCAATCATCCAGCCAGGAGTCTAGCTGCCCAGCCTGG-CCCGGTGGCCATTGTTGGCTCGACAG-----------------AGGTGCTGTCTCT s panTro5.chr2A 1463742 102 + 111504155 ttgtagaaaaaggaactgCTCCCCACTGTCAATCATCCAGC-AGGAGTCCAGCTGCCCAGCCTGG-CCCGGTGGCCATTGTTGTCTCGACAG-----------------AG-CGCTGTCTCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1401968 104 + 114371477 ttgtagaaaaaggaactgCTCCCCACTGTCAATCATCCAGCCAGGAGTCCAGCTGCCCAGCCTGG-CCCGGTGGCCATTGTTGGCTCGACAG-----------------AGGCGCTGTCTCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1426365 104 + 1464242 ttgtagaaaaaggaactgCTCCCCACTGTCAATCATCCAGCCAGGAGTCTAGCTGCCCAGCCTGG-CCCGGTGGCCATTGTTGGCTCGACAG-----------------AGGCGCTGTCTCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1148971 104 + 81552678 ttgtagaaaagggaactgCTCCCAACTGTCAATCATCCAGCCAGGAGTCGAGCTGCCCAGCCTGG-CCCGGTGACCGTTGTTGGCTCCACAG-----------------AGGCGCTGTCTCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1478795 104 + 108979918 ttgtagaaaaaggaactgCTCCCTGCTGTCAGTCATCCAGCCAGGAGTCGAGCTGCCCAGCCTGG-CCCGGTGACCACCGTTGGCTCGACAG-----------------AGATGCTGTCTCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1451243 104 - 111193037 ttgtagaaaaaggaactgCTCCCTGCTGTCAGTCATCCAGCCAGGAGTCGAGCTGCCCAGCCTGG-CCCGGTGACCACCGTTGGCTCGACAG-----------------AGACGCTGTCTCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1479177 104 + 3644372 ttgtagaaaaaggaactgCTCCCTGCTGTCAGTCATCCAGCCAGGAGTCGAGCTGCCCAGCCTGG-CCCGGTGACCACCGTTGGCTCGACAG-----------------AGACGCTGTCTCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1433907 104 - 10304083 ttgtagaaaaaggaactgCTCCCCGCTGTCAGTCATCCAGCCAGGAGTCAAGCCGCCCAGCCTGG-CCCGGTGGCCACCGTTGGCTCGACAG-----------------AGACGCTGTCTCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1511127 104 - 107702431 ttgtagaaaaaggaactgCTCCCCGCTGTCAGTCATCCAGCCAGGAGTCGAGCTGCCCAGCCTGG-CCCGGTGACCACTGTTGGCAAGACAG-----------------AGACGCTGTCTCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 999278 103 - 2200435 ttgtagaaaaa-gaaCTGCTCCCCGCCATCAGTCATCCAGCCAGGAGTCGAGCTGCCCAGCCTGG-CCCGGTGGCCACCGTTGGCTCGACAG-----------------AGACGCTGTCTCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1431640 104 - 13651311 ttgtagaaaaacaaactgCTCCCTGCTGTCAGTCATCCGGCCAGGAGTTGAGCTGCCCAGCCTGG-CCGGGTGACCACTGTTGGCTCGACAG-----------------AGACGCTGTCTCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1429394 96 - 108792865 TTCTAGAAAGAGGAACTGCTCCCCGCTGTCA---ATCCAGCCAGGATTCGAGCCGCCCAGCCTGG-CCTGGTGACTGTCGTTGGCTGGACAG-----------------AGGCGCTG----- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1258268 94 - 7082604 ttctagaaaaaggaactgCTCCCCGCTGTCA---ATCCAGCCAGGAGTCGAGCCGCTCAGCCTGG-CCTGGTGACTGTTGTTGGCTGGACAG-----------------AG--GCTG----- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1352015 96 + 1864846 ttctagaaaaaggaactgCTTCCTGCTGTCA---ATCCAACCAGGAGTCGAGCCGCTCGGCCTGG-CCTGGTGACTGTTGTTGGCTGGACAG-----------------AGGCGCTG----- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 170865 96 + 287728 TTCTGGAAAAAGGAACTGCTCCCCGCTGCCA---ATCCAGCCAGGAGTCGCGCCGCCCAGCCCGG-CCTGGTGACTGTTGTTGGCTGGACAG-----------------AGGCGCTG----- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 949492 120 + 5252280 tcacagaaaaggaaactgCCCCCAGCTATGGATGACCTAGCCAGGAAT-AAGCCCCCTAGCCTGGACTCAGGGCCCACTAGCA-CTTCACAGACCCAGGTGTCCCTTTAAGGTGCTACCTCA i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90026707 1720 - 120129022 I e dasNov3.JH576208 1775693 67 + 4416731 I a score=1201512.000000 s hg38.chr2_KI270774v1_alt 166715 141 + 223625 TGCCACTGCCAGCCCCATCACCATCCTGGG-AAGGAGGCTCTCTAGTCAGCCCTATAAACGCACCTCCTGAATATCCATGAAAAA-ATCAGCAAGAAGGCATTTCTGGGAAGTTC-AGCTGAGGCCCTTATTACAAGACGAGAA s panTro5.chr2A 1463844 140 + 111504155 TGCCACTGCCAGCCCCATCACCATCCTGGGGAAGGAGGCT-TCTAGTCAGCCCTATAAACGCACCTCCTGAATATCCATGAAAAA-ATCAGCAAGAAGGCATTTCTGG-AAGTTC-AGCTGAGGCCCTTATTGCAAGGCAAGAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1402072 141 + 114371477 TGCCACTGCCAGCCCCATCACCATCCTGGG-AAGGAGGCTCTCTAGTCAGCCCTATAAACGCACCTCCTGAATATCCATGAAAAA-ATCAGCAAGAAGGCATTTCTGGGAAGTTC-AGCTGAGGCCCTTATTGCAAGGCAAGAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1426469 141 + 1464242 TGCCACTGCCAGCCCCATCACCATTCTGGG-AAGATGGCTCTCTAGTCAGCCCTATAAACGCACCTCCTGAATATCCATGAAAAA-ATCAGCAAGAAGACATTTCTGGGAAGTTC-AGCTGAGGCCCTTATTGCAAGGCAAGAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1149075 142 + 81552678 TGCCACTGCCAGCCCCATCACCACCCTGGG-AAGGAGGCTCTCTAGTCAGCCCTATAAACGCACCTCCTGAATATCCATGAAAAAGATCAACAAGAAGACCTTTCTGGGAAGTTC-AGCTGAGGCCTTTATTGCAAGGCGAGAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1478899 142 + 108979918 TGCCACTGCCAGCCCCATCACCATCCTGGG-AAGGAGGCTCTCCAGTCAGCCCTATAAACGCACCTCCTGAATATTCATGAAAAACATCAACAAGAACGCCTTTCTGGGAAGTTC-AGCTGAGGCCTTTATTGCAAGGCGAGAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1451347 142 - 111193037 TGCCACTGCCAGCCCCATCACCATCCTGGG-AAGGAGGCTCTCCAGTCAGCCCTATAAACGCACCTCCTGAATATTCATGAAAAACATCAACAAGAACGCCTTTCTGGGAAGTTC-AGCTGAGGCCTTTATTGCAAGGCGAGAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1479281 138 + 3644372 TGCCACT----GCCCCATCACCATCCTGGG-AAGGAGGCTCTCCAGTCAGCCCTATAAACGCACCTCCTGAATATTCATGAAAAACATCAACAAGAACGCCTTTCTGGGAAGTTC-AGCTGAGGCCTTTATTGCAAGGCGAGAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1434011 141 - 10304083 TGCCACTGCCAGCCCCATCACCATCCTGGG-AAGGAGGCTCTCTAGTCAGCCCTATAAACGCACCTCCTGAATATTCATGAAAAA-ATCAACAAGAACGCCTTTCTGGGAAGTTC-AGCTGAGGCCTTTATTGCAAGGCGAGAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1511231 141 - 107702431 TGCCACTGCCAGCCCCATCACCATCCTGAG-AAGGAGGCTCTGTAGTCAGCCCTATAAACGCACCTCCTGAATATTCATGAAAAA-ATCAACAAGAACACCTTTCTGGGAAGTTC-AGCTGAGGCCTTTATTGCAAGGTGAGAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 999381 130 - 2200435 TGCCACTGCCAGCCCCATCACCATCCTGGG-AAGGAG------------GCCCTATAAACGCACCTCCTGAATATTCATGAAAAACATCAACAAGAACGCCTTTCTGGGAAGTTC-AGCTGAGGCCTTTATTGCAAGGCGAGAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1431744 142 - 13651311 TGCCACTGCCAGCCCCATCACCATCCTGGG-AGGGAGGCTCTCTAGTCAGCCCTATAAACGCACCTCCTGACTATTCATGAAAAAAATCAACAAGAACGCCTTTCTGGGAAGTTC-AGCTGAGGCCTTTATTGCAAGGCGAGAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1429490 117 - 108792865 --------CCAGCTGCAGCACCATCCTGGG-AAGGAGGCTCTCTAGGTAGCCCTTTACATGTGCCTCCTGGATATCCATGAAAAA-ATCAACAAGAAGACCTTTCTGGGAAGTTC-GGCTTTGGCC----------------AA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1258362 116 - 7082604 --------CCCGCTGCAGCACCGTCCTGGG-AAGGAGGCTCTCTAGGTAG-CCTGTACACAGGCCTCCTGGATAGCCATGAAAAA-ATCAAGAAGAAGACCTTTCTGAGAGGTTC-AGCTTCAGCC----------------CA i saiBol1.JH378218 C 0 I 50 s cebCap1.NW_016107827v1 1352111 117 + 1864846 --------CCCGCGGCAGCACCATCCTGGG-AAGGAGGCTCTCTAGGTAGCCCTATACACACGCCTCCTGGATAGCCATGAAAAA-ATCAACAAGAAGACCTTTCTGGGAGGTTC-AGCTTTGGCC----------------AA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 170961 99 + 287728 --------CCAGCCGCAGCACGGTCCTGGG-AAGGAGGCTCCCTAGGTAGCCCTGTACACGCGCCCCCTGGATAGCCATGAAAAA-ATCAACAAGAAGACCTTTCTGGG----------------------------------- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 949612 140 + 5252280 GGCCCCCACCAGGCCAACTGCTGTCCCAGG-GAGGGCAGTCTATGGTTGGCCTTGGAAAAGTACCTCCTGAATATCCATGAAAA--ACAAGCAAAAAAAACCTTTTGAGAAATCC-AGTTGAGGCCTTCATTGCAGGTCAAGAA i otoGar3.GL873658 C 0 I 1097 s dasNov3.JH576208 1775760 140 + 4416731 TGTTACCACCCAGGCCATTACTGCCCTGGA-AATATGCATTGGTTGCTAAGCTTGTAAATGGAATTTCTGAACATCCATGAAAAA-A--AAAAATACAACCTTTCAGAGGAATTCTATTTGAGGGTTTTACAGCAGGGCAAGAA i dasNov3.JH576208 I 67 C 0 e mm10.chr12 90026707 1720 - 120129022 I a score=75302.000000 s hg38.chr2_KI270774v1_alt 166856 9 + 223625 GGGTC-CAGT s panTro5.chr2A 1463984 10 + 111504155 GGGTCGCAGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1402213 9 + 114371477 GGGTC-CAGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1426610 9 + 1464242 GGGTC-CAGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1149217 8 + 81552678 -GGTC-CAGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1479041 9 + 108979918 GAGTC-CAGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1451489 9 - 111193037 GAGTC-CAGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1479419 9 + 3644372 GAGTC-CAGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1434152 9 - 10304083 GAGTG-CAGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1511372 9 - 107702431 GAGTC-CAGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 999511 9 - 2200435 GAGTC-CAGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1431886 9 - 13651311 GAGTC-CAGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1429607 9 - 108792865 AAGTC-CAGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1258528 9 - 7082604 AAGTC-CAGC i saiBol1.JH378218 I 50 C 0 s cebCap1.NW_016107827v1 1352228 9 + 1864846 AAGTC-CAGC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 171060 9 + 287728 AAGTC-CTGC i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1775900 9 + 4416731 AACTT-CATT i dasNov3.JH576208 C 0 I 978 e mm10.chr12 90026707 1720 - 120129022 I e otoGar3.GL873658 949752 1097 + 5252280 I a score=403338.000000 s hg38.chr2_KI270774v1_alt 166865 47 + 223625 TCCCTGGGGCTGTCAAGGAAGATGCTCTTCCACACTGCCGCTCGAGG- s panTro5.chr2A 1463994 47 + 111504155 TCCCTGGGGCTGTCAAGGAAGATGCTTCTCCACACTGCCGCTCGAGG- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1402222 47 + 114371477 TCCCTGGGGCTGTCAAGGAAGATGCTCTTCCACACTGCCGCTCGAGG- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1426619 47 + 1464242 TCCCTGGGGCTGTCAAGGAAGATGCTCTTCCACACTGCCGCTCGAGG- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1149225 47 + 81552678 TTCCTGGGGATGTCAAGAAAGATCCTCTTCCCCACTGCCGCTCAAGG- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1479050 47 + 108979918 TCCCTGGGGATGTCGAGGAAGATGCTCTTCTCCACTGCCACTCGAGG- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1451498 47 - 111193037 TCCCTGGGGCTGTCGAGGAAGATGCTCTTCTCCACTGCCACTCGAGG- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1479428 47 + 3644372 TCCCTGGGGATGTCGAGGAAGATGCTCTTCTCCACTGCCACTCGAGG- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1434161 47 - 10304083 TCCCTGGGGATGTCAAGGAAGATGCCCTTCTCCACTGCCACTCGAGG- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1511381 47 - 107702431 TCCCTGGGGATGTCAAGGAAGATGCTCTTCTCCACTGCCACTTGAGG- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 999520 47 - 2200435 TCCCTGGGGATGTCAAGGAAGATGCTCTTCTCCACTGCCACTCGAGG- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1431895 47 - 13651311 TCCCTGGGGATGTCAAGGAAGATGCTCTTCTCCACTGCCGCTCGAGG- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1429616 47 - 108792865 TCCCTGGGGACGTCAAGGATGGTGCTTCTGTCCCCAGCCGCTCGATG- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1258537 47 - 7082604 TCCCTGGGGACGTCAAGGATGGTGCTCCTCTCCCCAGCTGCCTGATG- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1352237 47 + 1864846 TCGCTGGGGACGTCGAAGATGGCGCTCCTCTCCCCAGCCGCCCGACG- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 171069 47 + 287728 TCCCTGGGGACGCCAAGGATGGCGCTCCTCTCCCCAGCCGCTCGATG- i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1776887 46 + 4416731 TCCCCAGGACTGATGAAGCATTTCTTCTTCCCCTTTGCT--CTGATTT i dasNov3.JH576208 I 978 C 0 e mm10.chr12 90026707 1720 - 120129022 I e otoGar3.GL873658 949752 1097 + 5252280 I a score=340817.000000 s hg38.chr2_KI270774v1_alt 166912 36 + 223625 CGAC-CCTCCTCTGGTATCCTGGGCCTCACTG------AGATG--- s panTro5.chr2A 1464041 35 + 111504155 CGAC-CCTCC-CTGGTATCCTGGGCCTCACTG------AGATG--- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1402269 36 + 114371477 CGAC-CCTCCCCTGGTATCCTGGGCCTCACTG------AGATG--- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1426666 36 + 1464242 CGAC-CCTCCTCTGGTGTCCTGGGCCTCACTG------AGATG--- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1149272 36 + 81552678 CGAC-CCTCCTCTGGTATCCTGGGCCTCACTG------AGATG--- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1479097 36 + 108979918 CGAC-CCTCCTCTGGTATCCTGGGCCTCACTG------AGACG--- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1451545 36 - 111193037 CGAC-CCTCCTCTGGTATCCTGGGCCTCACTG------AGACG--- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1479475 35 + 3644372 CGAC-CCTCCTCT-GTATCCTGGGCCTCACTG------AGACG--- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1434208 36 - 10304083 CGAC-CCTCCTCTGGTATCCTGGGCCTCACTG------AGACG--- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1511428 36 - 107702431 TGAC-CCTCCTCTGGTATCCTGGGCCTCACTG------AGACG--- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 999567 36 - 2200435 CGAC-CCTCCTCTGGTATCCTGGGCCTCACTG------AGACG--- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1431942 36 - 13651311 CGAC-CCTCCTCTGGTATCCTGGGCCTCACTG------AGACG--- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1429663 36 - 108792865 CCAC-CCTCTGTTGATACCCTGGGCCTCACTG------AGATG--- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1258584 36 - 7082604 CCAC-CCTCCACTGATACCCCGGGCCTCACTG------AGATG--- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1352284 36 + 1864846 CTAC-CCTCCGCTGATACCCCGGGCCTCACTG------AGATG--- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 171116 36 + 287728 CCAC-CCTCCGCCGATACCCTGGGCCTCACTG------AGACG--- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 950849 21 + 5252280 CAGC-CCTCACCAGGCATCCTG------------------------ i otoGar3.GL873658 I 1097 C 0 s dasNov3.JH576208 1776933 46 + 4416731 CAACTCCTTGTCTGGTGGCCTGGACTTTGTTGCAAATCAGACCCTG i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90026707 1720 - 120129022 I a score=1593628.000000 s hg38.chr2_KI270774v1_alt 166948 120 + 223625 -------------CTTTTCCTATCTGCACAGATCATCACCCTGAGGGATTACATCCCCAGGATCCTGGGACCCGAGGCCTTCCAGCAGTACGTGGGTCCCTATGAAGGCTATGACTCCACCGCCAACCCCACT s panTro5.chr2A 1464076 112 + 111504155 -------------CTTT--CTCTCTGCACAGATCATCACCCTGAGG-ATTACGTCCCCAGGATCCTGGGACC-GAGGCCTTCCAGCAGTACGTGG-TCCCTATGAAG-CTATGACTCCAC-GCCAACCC-ACT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1402305 120 + 114371477 -------------CTTTTCCTCTCTGCACAGATCATCACCCTGAGGGATTACGTCCCCAGGATCCTGGGACCCGAGGCCTTCCAGCAGTACGTGGGTCCCTATGAAGGCTATGACTCCACCACCAACCCCACT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1426702 120 + 1464242 -------------CTTTTCCTCTCTGCACAGATCATCACCCTGAGGGATTACGTCCCCAGGATCCTGGGACCCGAGGCCTTCCAGCAGTACGTGGGTCCCTATGAAGGCTATGACTCCACCGCCAACCCCACT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1149308 120 + 81552678 -------------CTTTTCCTTTCCGCACAGATCATCACCCTGAGGGATTACATCCCCAGGATCCTGGGACCTGAGGCCTTCCAGCAGTACGTGGGTCCCTATGAAGGCTATGACTCCACCGCCAACCCCACT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1479133 120 + 108979918 -------------CTTTTCCTTTCTGCATAGATCATCACCCTGAGGGATTACGTCCCCAGGATCCTGGGACCCGAGGCCTTCCAGCAGTACGTGGGCCCCTATGAAGGCTATGACTCCGCCGCCAACCCCACT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1451581 120 - 111193037 -------------CTTTTCCTTTCTGCATAGATCATCACCCTGAGGGATTACGTCCCCAGGATCCTGGGACCCGAGGCCTTCCAGCAGTACGTGGGCCCCTATGAAGGCTATGACTCCGCCGCCAACCCCACT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1479510 120 + 3644372 -------------CTTTTCCTTTCTGCATAGATCATCACCCTGAGGGATTACGTCCCCAGGATCCTGGGACCCGAGGCCTTCCAGCAGTACGTGGGCCCCTATGAAGGCTATGACTCCGCCGCCAACCCCACT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1434244 120 - 10304083 -------------CTTTTCCTTTCTGCACAGATCATCACCCTGAGGGATTACGTCCCCAGGATCCTGGGACCCGAGGCCTTCCAGCAGTACGTGGGCCCCTATGAAGGCTATGACTCCACCGCCAACCCCACT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1511464 120 - 107702431 -------------CTTTTCCTTTCTGCACAGATCATCACCCTGAGGGATTACGTCCCCAGGATCCTGGGACCCGAGGCCTTCCAGCAGTACGTGGGCCCCTATGAAGGCTATGACTCCACCGCCAACCCCACT i chlSab2.chr14 C 0 I 214 s manLeu1.NW_012103754v1 999603 120 - 2200435 -------------CTTTTCCTTTCTGCACAGATCATCACCCTGAGGGATTACGTCCCCAGGATCCTGGGACCCGAGGCCTTCCAGCAGTACGTGGGCCCCTATGAAGGCTATGACTCCACCGCCAACCCCACT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1431978 120 - 13651311 -------------CTTTTCCTTTCTGCATAGATCATCACCCTGAGGGATTACGTCCCCAGCATCCTGGGACCCGAGGCCTTCCAGCAGTACGTGGGCCCCTATGAAGGCTATGACTCCACCGCCAATCCCACT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1429699 120 - 108792865 -------------CTTTTCCTTTCTGCGCAGATCATCACCCTGAGGGACTACGTCCCCAGGATCCTGGGACCCGAGGCCTTCCGGCAGTACGTGGGTCCCTACGAAGGCTATGACTCCACTGCCAACCCCACT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1258620 120 - 7082604 -------------CTTTTCCTCTCCGTGCAGATCATCACCCTGAGGGATTACGTCCCCAGGATCCTGGGACCCGAGGCCTTCCGGCAGTACGTGGGCCCCTATGAAGGCTACGACTCCACCGCCAACCCCACT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1352320 120 + 1864846 -------------CTTTTCCTTTCTTCGCAGATCATCACCCTGAGGGATTATGTCCCCAGGATCCTGGGACCCGAGGCCTTCCGGGAGCATGTGGGCCCCTATGAAGGCTATGACTCCACCGCCAACCCCACT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 171152 120 + 287728 -------------CTTTTCCTCTCTGCGCAGATCGTCACCCTGAGGGACTATGTCCCCAAGATCCTGGGACCCGAGGCCTTCCGGCAGTACGTGGGCCCCTATGAAGGCTACGACCCCACCGCCAACCCCACG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 950870 119 + 5252280 --------------TTTTCCTTTCCACACAGATCATAACCATGCGTGATTACGTCCCCAAGGTCCTGGGCACAGAGGCCTTCGAGCAGCACATAGGACCCTATGAAGGCTATGACCCCACCGTGAACCCCACT i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90028427 120 - 120129022 -------------CTCTCTCCCCCTCTATAGATCATCACCATGAGGGATTATATCCCCAAAATCCTGGGTCCTGATGCCTTCAGGCAGTATGTGGGCCCCTATGAAGGCTACAACCCCACTGTGAACCCTACT i mm10.chr12 I 1720 C 0 s dasNov3.JH576208 1776979 133 + 4416731 CTCAAAAGGTCATGTTTCCCTTTCTTCATAGATCATTACCATGCGAGATTACATTCCAAAAATCCTGGGCCCTGAGGCTTTCCAGCGGTATGTGGGTCCCTACAAAGGCTACGATTCCACTGTGAACCCGACA i dasNov3.JH576208 C 0 C 0 a score=2060135.000000 s hg38.chr2_KI270774v1_alt 167068 159 + 223625 GTGTCCAACGTGTTCTCCACAGCCGCCTTCCGCTTCGGCCATGCCACGATCCACCCGCTGGTGAGGAGGCTGGACGCCAGCTTCCAGGAGCACCCCGACCTGCCCGGGCTGTGGCTGCACCAGGCTTTCTTCAGCCCATGGACATTACTCC--GTGGAGGT s panTro5.chr2A 1464188 155 + 111504155 GTGTCCAACGTGTTCTCCACAGCCGCCTTCCGCTTCGGCCACGCCACGATCCACCCGCTG-TGAGGAGGCTGGACGCCAGCTTC-AGGAGCACCC-GACCTGCCCGGGCTGTGGCTGCACCAGGCCTTCTT-AGCCCATG-ACACT-CTCCTCGTGGAGGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1402425 159 + 114371477 GTGTCCAACGTGTTCTCCACAGCCGCCTTCCGCTTCGGCCACGCCACGATCCACCCGCTGGTGAGGAGGCTGGACGCCAGCTTCCAGGAGCACCCCGACCTGCCCGGGCTGTGGCTGCACCAGGCCTTCTTCAGCCCATGGACACTCCTCC--GTGGAGGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1426822 159 + 1464242 GTGTCCAACGTGTTCTCCACAGCCGCCTTCCGCTTCGGCCACGCCACGATCCACCCGCTGGTGAGGAGGCTGGACGCCAGCTTCCAGGAGCACCCCGACCTGCCCGGGCTGTGGCTGCACCAGGCCTTCTTCAGCCCATGGACACTCCTCC--GTGGAGGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1149428 159 + 81552678 GTGTCCAACGTGTTCTCCACAGCCGCCTTCCGCTTCGGCCATGCCACGATCCACCCGATGGTGAGGAGGTTGGACGCCAGCTTCCAGGAGCACCCCGATCTGCCTGGGCTGTGGCTGCACGAGGCCTTCTTCAGCCCATGGACACTCCTCC--GCGGAGGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1479253 159 + 108979918 GTGTCCAACGTGTTCTCCACGGCCGCCTTCCGCTTCGGCCACGCCACGATCCACCCGCTGGTGAGGAGGCTGGACGCTGGCTTCCAGGAGCACCCCGGCCTGCCCGGGCTGTGGCTGCACGAGACCTTCTTCAGCCCATGGACGCTCCTCC--ACGGAGGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1451701 159 - 111193037 GTGTCCAACGTGTTCTCCACGGCCGCCTTCCGCTTCGGCCACGCCACGATCCACCCGCTGGTGAGGAGGCTGGACGCTGGCTTCCAGGAGCACCCCGGCCTGCCCGGGCTGTGGCTGCACGAGACCTTCTTCAGCCCATGGACGCTCCTCC--ACGGAGGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1479630 159 + 3644372 GTGTCCAACGTGTTCTCCACGGCCGCCTTCCGCTTCGGCCACGCCACGATCCACCCGCTGGTGAGGAGGCTGGACGCTGGCTTCCAGGAGCACCCCGGCCTGCCCGGGCTGTGGCTGCACGAGACCTTCTTCAGCCCATGGACGCTCCTCC--ACGGAGGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1434364 159 - 10304083 GTGTCCAACGTGTTCTCCACGGCCGCCTTCCGCTTCGGCCACGCCACGATCCACCCGCTGGTGAGGAGGCTGGACGCTGGCTTCCAGGAGCACCCTGACCTGCCCGGGCTGTGGCTGCACGAGGCCTTCTTCAGCCCATGGACGGTCCTCC--ACGGAGGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1511798 159 - 107702431 GTGTCCAACGTGTTCTCCACGGCCGCCTTCCGCTTCGGCCATGCCACGATCCACCCGCTGGTGAGGAGGCTGGACGCTGGCTTCCAGGAGCACCCCAACCTGCCCGGGCTGTGGCTGCATGAGGCCTTCTTCAGCCCGTGGACGCTCCTCC--ATGGAGGT i chlSab2.chr14 I 214 C 0 s manLeu1.NW_012103754v1 999723 159 - 2200435 GTGTCCAACGTGTTCTCCACGGCCGCCTTCCGCTTCGGCCACGCCACGATCCACCCGCTGGTGAGGAGGCTGGACGCTGGCTTCCAGGAGCACCCTGACCTGCCCGGGCTGTGGCTGCACGAGGCCTTCTTCAGCCCATGGACGGTCCTCC--ACGGAGGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1432098 159 - 13651311 GTATCCAATGTGTTCTCCACGGCCGCCTTCCGCTTTGGCCATGCCACGATCCACCCGCTGGTGAGAAGGCTGGACGCTGGCTTCCAGGAGCACCCCGACCTGCCTGGGCTGTGGCTGCACGAGGCCTTCTTCAGCCCATGGACGCTCCTCC--ATGGAGGT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1429819 159 - 108792865 GTGTCCAACGTGTTCTCCACGGCTGCCTTCCGCTTCGGCCATGCCACGATCCACCCGCGGGTGAGGAGGCTGGACGCTGACTTCCAGGAGCACCCTGACCTGCCCGCGCTGTGGCTGCATGAGGCATTCTTCAGCCCTTGGACACTTCTCC--GAGGGGGT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1258740 159 - 7082604 GTGTCCAACGTGTTCTCCACCGCCGCCTTCCGCTTCGGCCACGCCACGATCCACCCGCGGGTGAGGAGGCTGGATGCCGACTTCCAGGAGCACCCCGACCTGCCTGCGCTGTGGCTGCACGAGGCATTCTTCAGCCCTTGGACGCTCCTCC--GAGGGGGT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1352440 159 + 1864846 GTGTCTAACGTGTTCTCCACGGCCGCCTTCCGCTTCGGCCATGCCACGATCCACCCACGGGTGAGGAGGCTGGATGCTTACTTCCAGGAGCACCCCGACCTGCCCACGCTGTGGCTGCATGAGGCATTCTTCAGCCCTTGGACGCTCCTCC--GAGGAGGT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 171272 159 + 287728 GTGTCCAACGTGTTCTCCACGGCCGCCTTCCGCTTCGGCCACGCCACGATCCACCCGCGGGTGAGGAGGCTGGACGCCGACTTCCAGGAACACCCCGACCTGCCCGCGCTGTGGCTGCATGAGGCATTCTTCAGCCCTTGGACGCTCCTCC--GAGGAGGT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 950989 159 + 5252280 GTGTCCAACGTATTTTCCACGGCCGCCTTCCGCTTTGGCCACACCATTGTCAACCCGCTGGTGAGGCGGCTCGATGCCTACTTCCAGGAGCACCCCACCCTCCCCAGGCTGCCTCTGCACGACACCTTCTTCAACCCATGGACACTCATCC--GGGGAGGT i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90028547 159 - 120129022 GTGTCCAACATCTTCTCCACTGCTGCCTTTCGCTTTGGCCATGCCACAGTCCATCCACTGGTGAGACGGCTAAACACTGACTTCCAGGAGCACACAGAGCTCCCCAGGTTGCAGCTGCGTGATGTCTTCTTCAGACCCTGGAGGCTTATCC--AGGAAGGT i mm10.chr12 C 0 I 1678 s dasNov3.JH576208 1777112 159 + 4416731 GTGTCCAATGTGTTTTCTACGGCTGCGTTCCGCTTTGGGCATGCCACAATTCATCCCCTGGTGAGACGCCTTGATGCTCATTTTCAGGAACATCCAGACCTCCCAAGGTTACAGCTGCACGATGTCTTCTTTAGTCCTTGGAGACTTGTCA--AGGAAGGT i dasNov3.JH576208 C 0 C 0 a score=54808.000000 s hg38.chr2_KI270774v1_alt 167227 4 + 223625 GAGT s panTro5.chr2A 1464343 4 + 111504155 GAGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1402584 4 + 114371477 GAGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1426981 4 + 1464242 GAGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1149587 4 + 81552678 GAGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1479412 4 + 108979918 GAGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1451860 4 - 111193037 GAGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1479789 4 + 3644372 GAGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1434523 4 - 10304083 GAGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1511957 4 - 107702431 GAGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 999882 4 - 2200435 GAGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1432257 4 - 13651311 GAGT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1429978 4 - 108792865 GAGT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1258899 4 - 7082604 GAGT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1352599 4 + 1864846 GAGT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 171431 4 + 287728 GAGT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 951148 4 + 5252280 GAGT i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1777271 4 + 4416731 GTGT i dasNov3.JH576208 C 0 I 305 e mm10.chr12 90028706 1678 - 120129022 I a score=13600.000000 s hg38.chr2_KI270774v1_alt 167231 1 + 223625 G s panTro5.chr2A 1464347 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1402588 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1426985 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1149591 1 + 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1479416 1 + 108979918 G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1451864 1 - 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1479793 1 + 3644372 G i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1434527 1 - 10304083 G i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1511961 1 - 107702431 G i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 999886 1 - 2200435 G i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1432261 1 - 13651311 G i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1429982 1 - 108792865 G i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1258903 1 - 7082604 G i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1352603 1 + 1864846 G i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 171435 1 + 287728 G i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 951152 1 + 5252280 G i otoGar3.GL873658 C 0 I 77 e mm10.chr12 90028706 1678 - 120129022 I e dasNov3.JH576208 1777275 305 + 4416731 I a score=193352.000000 s hg38.chr2_KI270774v1_alt 167232 24 + 223625 AGTGCGGTCCCTGCAGCTGGTCC--C s panTro5.chr2A 1464348 22 + 111504155 AGTGCG--TCCTGCAGCTGGTCC--C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1402589 24 + 114371477 AGTGCGGTCCCTGCAGCTGGTCC--C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1426986 24 + 1464242 AGTGCGGTCCCTGCAGCTGGTCC--C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1149592 24 + 81552678 ACTGCGGTCCCTGCAGCTGGTCC--C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1479417 24 + 108979918 AGTGCAGTCCCTGCAGCTGGTCC--C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1451865 24 - 111193037 AGTGCAGTCCCTGCAGCTGGTCC--C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1479794 24 + 3644372 AGTGCAGTCCCTGCAGCTGGTCC--C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1434528 24 - 10304083 AGTGCAGTCCCTGCAGCTGGTCC--C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1511962 24 - 107702431 AGTGCAGTCCCTGCAGCTGGTCC--C i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 999887 24 - 2200435 AGTGCGGTCCCTGCAGCTGGTCC--C i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1432262 24 - 13651311 AGTGCAGTCCCTGCAGCTGGTCC--C i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1429983 23 - 108792865 GACGCGGTCCCTGCGGCTGGTCC--- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1258904 23 - 7082604 GGCGCGGTCCCTGAGGCTGGTCC--- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1352604 24 + 1864846 GGTGCGGTCCCTGCGGCTGGTCCC-- i cebCap1.NW_016107827v1 C 0 I 11 s aotNan1.NW_018513311v1 171436 24 + 287728 GGCGCAGTGCCTGCGGCTGGTCC-C- i aotNan1.NW_018513311v1 C 0 I 11 e mm10.chr12 90028706 1678 - 120129022 I e otoGar3.GL873658 951153 77 + 5252280 I e dasNov3.JH576208 1777275 305 + 4416731 I a score=52928.000000 s hg38.chr2_KI270774v1_alt 167256 12 + 223625 CATGAACTCTCC s panTro5.chr2A 1464370 11 + 111504155 -ATGAACTCTCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1402613 12 + 114371477 CATGAACTCTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1427010 12 + 1464242 CATGAAGTCTCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1149616 12 + 81552678 CGTGAAGTCTCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1479441 12 + 108979918 TGTGAAGTCGCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1451889 12 - 111193037 TGTGAAGTCGCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1479818 12 + 3644372 TGTGAAGTCACC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1434552 10 - 10304083 TGTGAAGTCG-- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1511986 12 - 107702431 TGTGAAGTCGCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 999911 12 - 2200435 TGTGAAGTCGCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1432286 12 - 13651311 CGTGAAGTCGCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1430006 12 - 108792865 CACGAGAGCTCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1258927 12 - 7082604 CATGAGAGCTCC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 171460 11 + 287728 I e mm10.chr12 90028706 1678 - 120129022 I e cebCap1.NW_016107827v1 1352628 11 + 1864846 I e otoGar3.GL873658 951153 77 + 5252280 I e dasNov3.JH576208 1777275 305 + 4416731 I a score=48522.000000 s hg38.chr2_KI270774v1_alt 167268 7 + 223625 CTTCTtt s panTro5.chr2A 1464381 7 + 111504155 CTTCTtt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1402625 7 + 114371477 CTTCTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1427022 7 + 1464242 CTTCTtt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1149628 7 + 81552678 CTTCTTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1479453 7 + 108979918 CTTCTTt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1451901 7 - 111193037 CTTCTTt i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1479830 7 + 3644372 CTTCTTt i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1434562 7 - 10304083 CTTCTTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1511998 7 - 107702431 CTTCTTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 999923 7 - 2200435 CTTCTTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1432298 7 - 13651311 CTTCATT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1430018 7 - 108792865 CTTCTTT i calJac3.chr14 C 0 I 8 e aotNan1.NW_018513311v1 171460 11 + 287728 I e mm10.chr12 90028706 1678 - 120129022 I e saiBol1.JH378218 1258939 0 - 7082604 C e cebCap1.NW_016107827v1 1352628 11 + 1864846 I e otoGar3.GL873658 951153 77 + 5252280 I e dasNov3.JH576208 1777275 305 + 4416731 I a score=1486680.000000 s hg38.chr2_KI270774v1_alt 167275 286 + 223625 ttttaatttt-----tttaaattatattttaagttctagggtacatgtgcacaacgtg-caggtttgttacgtagggtatacatgtgccatgttggtttgct-gtacccattaactcgtaatttacattaggtatttctcctaatgctatccctccccctgccccccaccccacgacagacgggatatgatgatccccgccctgtgtccatgtgttctcattgttcaattcccacctatgagtgagaacatgcggtgtttggttttctgtccttgcgatagtttgctcagaat s panTro5.chr2A 1464388 280 + 111504155 ttttaatttt-----tttaaattatattttaagtt--agggtacatgtgtacaacgtggcaggtttgttacgtagg-tatacatgtccaatgttg-tttgcttgtacccattaactcgtaatttacattagatatttctcctaatgctatccctccccatgccccca--cccacgacagacgg-atgtgatgatccccgctctgtgtccatgtgttctcattgttcaattcc-acctatgagtgagaacatgcggtgtttggttttctgtccttgcgatagtttgctcagaat i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1402632 285 + 114371477 TTATAA-ttt-----tttaaattatattttaagttctagggtacatgtgtacaacgtg-caggtttgttacgtagggtatacatgtgccatgttggtttgct-gtacccattaactcgtaatttacattagatatttctcctaatgctatccctccccatgccccccaccccacgacagacgggatgtgatgatccccgccctgtgtccacgtgttctcattgttcaattcccacctatgagtgagaacatgcggtgtttggttttctgtccttgcgatagtttgctcagaat i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1427029 285 + 1464242 ttttaatttt-----tttaaattatattttaagttctagggtacatgtgcacaacgtg-caggtttgttatgtagggtatacatgtgccatgttg-gttgct-gtacccattaactcgtaatttacattaggtatttctcctaatgctatccttccccctgccccccaccccacgacagacgggatgtgatgatccccgccctgtgtccatgtgttctcattgttcaattcccacctatgagtgagaacatgcggtgtttggttttctgtccttgcgatagtttgctcagaat i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1149635 285 + 81552678 tttttaattt-----tttttattatactttaagttctagggtacatgtgcacaacatg-caggtttgttacatagggtatacgtgtgctgtgttggtttgct-gcacccattaactcgtaatttacattaggtatttctcctaatgctatccctccccctgccccccacctcacaac-gatggggtgtgatgatccctaccctgtgtccaagtgttctcattgttcaattccaacttatgagtgagaacatgtggtgtttggttttttgtccttgtgatagtttgctcagaat i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1479460 282 + 108979918 ttttata--------tttttattatactttaagttctagggtaaatgtgcacaatgtg-caggtttgttacatagggtagacatgtgccctgttggtttgct-gcacccattaagtcacaatttacattaggcatttctcctaatgctatccctccccctgccccc-acctcacgacagatggggtgtgatgatccctgccctgtgtccatgggttctcattgttcaattcccacctatgagtgagaacatgcggtatttggttttctgtccttgtgatagtttgctgagaat i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1451908 282 - 111193037 ttttata--------tttttattatactttaagttctagggtaaatgtgcacaacgtg-caggtttgttacatagggtagacatgtgccctgttggtttgct-gcacccattaagtcacaatttacattaggcatttctcctaatgctatccctccccctgccccc-acctcacgacagatggggtgtgatgatccctgccctgtgtccatgggttctcattgttcaattcccacctatgagtgagaacatgcggtatttggttttctgtccttgtgatagtttgctgagaat i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1479837 282 + 3644372 ttttata--------tttttattatactttaagttctagggtaaatgtgcacaacgtg-caggtttgttacatagggtagacatgtgccctgttggtttgct-gcacccattaagtcacaatttacattaggcatttctcctaatgctatccctccccctgccccc-acctcacgacagatggggtgtgatgatccctgccctgtgtccatgggttctcattgttcaattcccacctatgagtgagaacatgcggtatttggttttctgtccttgtgatagtttgctgagaat i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1434569 290 - 10304083 TTTTATAtttttatttttttattatactttaagttctagggtaaatgtgcacaacgtg-caggtttgctacatagggtagacatgtgccctgttgttttact-gcacccattaactcataatttacattaggcatttctcctaatgctatccctccccctgccccc-accccacgacagatggggtgtgatgatccctgccctgtgtccatgggttctcattgttcaattcccacctatgagtgagaacatgcggtgtttggttttctgtccttgcgatagtttgctgagaat i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1512005 290 - 107702431 TTTTATAtttttatttttttattatactttaagttctagggtaaatgtacacaacgtg-caggtttgttacatagggtagacatgtgccctgttggtttact-gcacccattaactcataatttacattaggcatttctcctaatgctatccctccccctgccccc-accccacgacagatggggtgtgatgatccctgcactgtgtccgtgggttctcattgttcagctcccacctatgagtgagaacatgcggtgtttggttttctgtccttgcgatagtttgctgagaat i chlSab2.chr14 C 0 I 2320 s manLeu1.NW_012103754v1 999930 290 - 2200435 TTTTATAtttttatttttttattatactttaagttctagggtaaatgtgcacaacgtg-caggtttgttacgtagggtagacatgtgccctgttggtttact-gcacccattaactcataatttacattaggcatttctcctaatgctatccgtccccctgccccc-accccacgacagatggggtgtgatgatccctgccctgtgtccatgggttctcattgttcaattcccacctatgagtgagaacatgcggtgtttggttttctgtccttgcgatagtttgctgagaat i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1432305 290 - 13651311 TTTTATAtttttatttttttattatactttaagttctagggtaaatgtgcacaacgcg-caggtttgttacatagggtagacatgtgccctgttggtttgct-gcacccattaactcataatttacattaggcatttctcctaatgctatccctccccctgccccc-actgcacgacagatggggtgtgatgatccttgccctgtgtccatgggttctcattgttcaattcccacctatgagtgagaacatgcagtgtttggttttctgtccttgcgatagtttgctgagaat i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 171460 11 + 287728 I e mm10.chr12 90028706 1678 - 120129022 I e saiBol1.JH378218 1258939 0 - 7082604 C e cebCap1.NW_016107827v1 1352628 11 + 1864846 I e otoGar3.GL873658 951153 77 + 5252280 I e dasNov3.JH576208 1777275 305 + 4416731 I e calJac3.chr14 1430025 8 - 108792865 I a score=69146.000000 s hg38.chr2_KI270774v1_alt 167561 15 + 223625 gatggtttccagctg s panTro5.chr2A 1464668 14 + 111504155 gatg-tttccagctg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1402917 15 + 114371477 gatggtttccagctg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1427314 15 + 1464242 gatggtttccagctg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1149920 15 + 81552678 aatggtttccagctg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1479742 15 + 108979918 gatgatttccagctg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1452190 15 - 111193037 gatgatttccagctg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1480119 15 + 3644372 gatgatttccagctg i macNem1.NW_012011978v1 C 0 I 36 s cerAty1.NW_012000820v1 1434859 15 - 10304083 gatgatttccagctg i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 1000220 15 - 2200435 gatgatttccagctg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1432595 15 - 13651311 gatgatttccagctg i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 171460 11 + 287728 I e mm10.chr12 90028706 1678 - 120129022 I e saiBol1.JH378218 1258939 0 - 7082604 C e cebCap1.NW_016107827v1 1352628 11 + 1864846 I e otoGar3.GL873658 951153 77 + 5252280 I e dasNov3.JH576208 1777275 305 + 4416731 I e calJac3.chr14 1430025 8 - 108792865 I e chlSab2.chr14 1512295 2320 - 107702431 I a score=130034.000000 s hg38.chr2_KI270774v1_alt 167576 54 + 223625 catccatgtccctgaaaaggacat-gaactcatcgtttttttatggctgcatagt s panTro5.chr2A 1464682 55 + 111504155 catccatgtccatgaaaaggacattgaactcatcgtttttttacggctgcatagt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1402932 54 + 114371477 catccatgtccctgaaaaggacat-gaactcatcgtttttttacggctgcatagt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1427329 52 + 1464242 catccatgtccctgaaaaggaca--gaactcatcg-ttttttatggctgcatagt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1149935 53 + 81552678 tatccatgtccctgcaaaggacac-gaactcattc-ttttttatggctgcatagt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1479757 29 + 108979918 -----------------------c-gaacttatcc--tttttatggctgtatagt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1452205 29 - 111193037 -----------------------c-gaacttatcc--tttttatggctgtatagt i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1434874 53 - 10304083 catccatgtccctgcaaaggacat-gaactcatcc-ttttttatggctgcatagt i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 1000235 53 - 2200435 catccatgtccctgcaaaggacat-gaactcatcc-ttttttatggctgcataat i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1432610 53 - 13651311 catccatgtccctgcaaaggacat-ggactcatcc-tttttgatggctgcatagt i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 171460 11 + 287728 I e mm10.chr12 90028706 1678 - 120129022 I e saiBol1.JH378218 1258939 0 - 7082604 C e cebCap1.NW_016107827v1 1352628 11 + 1864846 I e otoGar3.GL873658 951153 77 + 5252280 I e dasNov3.JH576208 1777275 305 + 4416731 I e calJac3.chr14 1430025 8 - 108792865 I e chlSab2.chr14 1512295 2320 - 107702431 I e macNem1.NW_012011978v1 1480134 36 + 3644372 I a score=432480.000000 s hg38.chr2_KI270774v1_alt 167630 103 + 223625 attccttggtgt-atatgtgccacat--tttcttaatccag-tctagcactgatgg-acatttgggtt--ggttccaagtctttgctattttaaatagt-gctgcaataaa s panTro5.chr2A 1464737 104 + 111504155 attccttg-tgt-atatgtgccacat--tttcttaatccaggtctagcactgatgg-acatttggctt--tggttcaagtctttgctattttaaatagttgctgcagtaaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1402986 103 + 114371477 attccttggtgt-atatgtgccacat--tttcttaatccag-tctagcactgatgg-acatttgggtt--ggttccaagtctttgctattttaaatagt-gctgcagtaaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1427381 103 + 1464242 attccttggtgt-atatgtgccacat--tttcttaatccag-tctagcactgatgg-acatttgggtt--ggttccaagtctttgctattttaaatagt-gctgcagtaaa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1149988 103 + 81552678 attccatggtgt-gtatgtgccacat--tttcttaatctag-tctatcactgatgg-acatttggctt--ggttccaagtctttgctattttaaatagt-gccacaataaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1479786 103 + 108979918 attccatggtgt-atatgtgccacat--tttcttaatccag-tctatcactgatgg-acatttgggtt--ggttccaagtctttgctattttaaatagt-gccacaataaa i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1452234 102 - 111193037 attccatggtgt-atatgtgccacat--tttcttaatccag-tctatcactgatgg-acatttggtt---ggttccaagtctttgctattttaaatagt-gccacaataaa i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1480170 105 + 3644372 attccctggtgtaatatgtgccacattattcattaatccag-tctac--ctgatggaacatttgggttgcgtttcccagtctttgcta--ttaaatagt-gcccaaataaa i macNem1.NW_012011978v1 I 36 I 10 s cerAty1.NW_012000820v1 1434927 103 - 10304083 attccatggtgt-atatgtgccacat--tttcttaatccag-tctatcactgatgg-acatttgggtt--ggttccaagtctttgctattttaaatagt-gccgcaataaa i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 1000288 103 - 2200435 attccatggtgt-atatgtgccacat--tttcttaatccag-tctatcactgatgg-acatttgggtt--ggttccaagtctttgctattttaaatagt-ggcacaataaa i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1432663 103 - 13651311 attccatggtgt-atatgtgccacat--tttcttaatccag-tctgtcactgatgg-acatttgggtt--ggttccaagtctttgctattttaaatagt-gctgcaataaa i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 171460 11 + 287728 I e mm10.chr12 90028706 1678 - 120129022 I e saiBol1.JH378218 1258939 0 - 7082604 C e cebCap1.NW_016107827v1 1352628 11 + 1864846 I e otoGar3.GL873658 951153 77 + 5252280 I e dasNov3.JH576208 1777275 305 + 4416731 I e calJac3.chr14 1430025 8 - 108792865 I e chlSab2.chr14 1512295 2320 - 107702431 I a score=34140.000000 s hg38.chr2_KI270774v1_alt 167733 10 + 223625 catacgtgtg s panTro5.chr2A 1464841 10 + 111504155 catacgtgtg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1403089 10 + 114371477 catacgtgtg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1427484 10 + 1464242 catacgtgtg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1150091 10 + 81552678 catatgtgtg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1479889 10 + 108979918 catacatatg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1452336 10 - 111193037 catatatatg i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1435030 10 - 10304083 catacatatg i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 1000391 10 - 2200435 catacatatg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1432766 10 - 13651311 catacatatg i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 171460 11 + 287728 I e mm10.chr12 90028706 1678 - 120129022 I e saiBol1.JH378218 1258939 0 - 7082604 C e cebCap1.NW_016107827v1 1352628 11 + 1864846 I e otoGar3.GL873658 951153 77 + 5252280 I e dasNov3.JH576208 1777275 305 + 4416731 I e calJac3.chr14 1430025 8 - 108792865 I e chlSab2.chr14 1512295 2320 - 107702431 I e macNem1.NW_012011978v1 1480275 10 + 3644372 I a score=131324.000000 s hg38.chr2_KI270774v1_alt 167743 29 + 223625 catgtgtctttatagcagcatgat-ttat-a s panTro5.chr2A 1464851 30 + 111504155 catgtgtctttatagtagcatgatattat-a i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1403099 29 + 114371477 catgtgtctttatagtagcatgat-ttat-a i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1427494 29 + 1464242 catgtgtctttatagtagcatgat-ttat-a i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1150101 29 + 81552678 catatgtctttacagtagcatgat-ttat-a i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1479899 29 + 108979918 catgtgtctttgtagtagcatgat-ttat-a i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1452346 29 - 111193037 catgtgtctttgtagtagcatgat-ttat-a i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1480285 30 + 3644372 catgtgtctttgtagtaacatgat-ttatca i macNem1.NW_012011978v1 I 10 C 0 s cerAty1.NW_012000820v1 1435040 29 - 10304083 catgtgtctttatagtagcatgat-ttat-a i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 1000401 29 - 2200435 catgtgtccttatagtagcatgat-ttat-a i manLeu1.NW_012103754v1 C 0 I 8418 s colAng1.NW_012118821v1 1432776 29 - 13651311 catgtgtctttatagtagcatgat-ttat-a i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 171460 11 + 287728 I e mm10.chr12 90028706 1678 - 120129022 I e saiBol1.JH378218 1258939 0 - 7082604 C e cebCap1.NW_016107827v1 1352628 11 + 1864846 I e otoGar3.GL873658 951153 77 + 5252280 I e dasNov3.JH576208 1777275 305 + 4416731 I e calJac3.chr14 1430025 8 - 108792865 I e chlSab2.chr14 1512295 2320 - 107702431 I a score=460769.000000 s hg38.chr2_KI270774v1_alt 167772 148 + 223625 gtcc-cttgggta--tatgccaagtaattggatcgctgggtcaaatggtatttctagttctagatgc--ttgaggaatcgccacactgtcttccacaatggttgaactactttaca-gtcccaccaacagtgtaaaagcattcct-tttctccac s panTro5.chr2A 1464881 145 + 111504155 atcc-cttgggta--tattccaagtaatgggattgctgggtcaaa-ggcatttctagttctagatcc--ttgaggaatcgtcacactgtcttccacaatggttgaactactttaca-gtcccac-aacagtgtaaaagcattcct-tttctcca- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1403128 148 + 114371477 atcc-cttgggta--tatgacaagtaattggatcgctgggtcaaatggcatttctagttctagatcc--ttgaggaatcgtcacactgtcttccacaatggttgaactactttaca-gtcccaccaacagtgtaaaagcattcct-tttctccac i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1427523 148 + 1464242 atcc-cttgggta--tatgccaagtaattggatcgctgggtcaaatggcatttctagttctagatcc--ttgaggaatcatcacactgtcttccacaatggttgaactactttaca-gtcccaccaacagtgtaaaagcattcct-tttctccac i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1150130 148 + 81552678 atcc-tttgggta--tatacccagtaattggatcgctgggtcaaatgatatttctatttctagatcc--ttgaggaatcgccacactgtcttccacaatggttgaaccaatttaca-ctcccatcaacagtgtaaaagcattcct-tttctccac i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1479928 148 + 108979918 atcc-tttgggta--tatgcccagtaattggatcactgggtcaaatggtatttctagttctagatcc--ttgagg-atcaccacactgtctttcacaatggttgaactaatttgca-ctcccaccaacagtgtaaaagcattcctatttctccac i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1452375 148 - 111193037 atcc-tttgggta--tatgcccagtaattggatcactgggtcaaatggtatttctagttctagatcc--ttgagg-atcaccacactgtctttcacaatggttgaactaatttgca-ctcccaccaacattgtaaaagcattcctatttctccac i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1480315 142 + 3644372 atccttttgggtatctatgcccagt-attga--cact-ggtcaaatggtattt-tagtt-tagatccttttgagg-atc-ccacat--gcttccacaatggttgaactaa--tgcagctcacaccaacagtgtaaaagca-tcttatttctccac i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1435069 149 - 10304083 atcc-tttgggta--tatgcccagtaattggattgctgggtcaaatggtattactagttctagatcc--ttgaggaatcaccacactgtcttccacaatggttgaactaatttgca-ctcccaccaacagtgtaaaagcattcctatttctccac i cerAty1.NW_012000820v1 C 0 C 0 s colAng1.NW_012118821v1 1432805 149 - 13651311 atcc-tttgggta--tatacccagtaatgggatggctgggtcaaatggtatttctagttctagatcc--ttgaggaattgccacactgtcttccacaatggttgaactagtttaca-gtcccatgaacagtgtaaaagtgttcctatttctccac i colAng1.NW_012118821v1 C 0 I 1523 e aotNan1.NW_018513311v1 171460 11 + 287728 I e mm10.chr12 90028706 1678 - 120129022 I e saiBol1.JH378218 1258939 0 - 7082604 C e cebCap1.NW_016107827v1 1352628 11 + 1864846 I e otoGar3.GL873658 951153 77 + 5252280 I e dasNov3.JH576208 1777275 305 + 4416731 I e calJac3.chr14 1430025 8 - 108792865 I e manLeu1.NW_012103754v1 1000430 8418 - 2200435 I e chlSab2.chr14 1512295 2320 - 107702431 I a score=1487891.000000 s hg38.chr2_KI270774v1_alt 167920 530 + 223625 atcctc--tccagca-tcta-ttgttttcctgacttttt---aatgatc-gccattc-taactggtgtgagatggtatctcattgtggttttgatttgcatttctctgatggccagtgatgatgaacattttttcatgtgtctgttggctgcataaatgtcttcttt-gggaagtgtctgttcatatccttcgcccactttttgatggggttgtttg-ttttttccttgtaaa-ttggttt-gcattttttgtagattctggatattagccctttgtcagatgggtagatt-gc-aaaaattttct-cccattttgtaggttgcttgttcactctgatagtggtttctatt--gctgtgcagaaactcttta-----attagatctcatttgtcaattttggcttttgttgccattgcttttggtgttttagtcatgaagtccttgcccatgcctatgtcctg-aatggtatt-gcctaagttttcttctagggtttttacggttttaggtct-aacatttaagtctttaatccatcttgaattaatttttgcata s panTro5.chr2A 1465026 532 + 111504155 atcctc--tccagcaaccta-ttgttttcctgactttt----aatgatc-gccattc--aactggtgtgagatggtatctcattgtggttt-gatttgcatttctctaatgaccagtaatgatgagcatttcttcatgtgtctgttggctgcataaatgtcttcttttaagaagtgtctgttcctatcctttgcccactttttggtggg--tgtt-g-tttttttcttgtaaacttggttttgcatttt--gtagattctggatattagccctttgtcagatgg-tagatttgc-aaaaatttctc-cacattctgtag-ttgcctgttcactctgatggtggtttcttttttgctgtgcagaagctctttagtttaattagatcccatttgtcaattttggcttttgttgccattgcttttggtgttttagacatgaagtccttgcccatgcctatgtcctg-aatggtatt-gcctaggttttcttctagggtttttatggttttaggtct-aacatgtaagtctttaatccatcttgaattaatttttgcata i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1403276 535 + 114371477 atcctc--tccagca-cctg-ttg-tttcctgacttttt---aatgatc-gccattc-caactggtgtgagatggtatctcattgtggttttgatttgcatttctctaatgaccagtaatgatgagcatttcttcatgtgtctgttggctgcataaatgtcttcttttaagaagtgtctgttcctatcctttgcccactttttggtggggttgtttg-ttttttccttgtaaa-ttggttt-gcattttttgtagattctggatattagccctttgtcagatgggtagatt-gc-aaaaattttct-cccattctgtaggttgcctgttcactctgatggtggtttctttt--gctgtgcagaagctctttagtttaattagatcccatttgtcaattttggcttttgttgccattgcttttggtgttttagacatgaagtccttgcccatgcctatgtcctg-aatggtatt-gcctaggttttcttctagggtttttatggttttaggtct-aacatgtaagtctttaatccatcttgaattaatttttgcata i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1427671 536 + 1464242 atcctc--tccagca-tcta-ttgttttcctgacttttt---aatgatc-gccattc-caactggtgtgagatggtatctcattgtggttttgatttgcatttctctaatgaccagtaatgatgagcatttcttcatatgtctgttggctgcataaatgtcttcttttaagaagtgtctgttcctatcctttgcccactttttggtggggttgtttg-ttttttccttgtaaa-ttggttt-gcattttttgtagattctggatattagccctttgtcagatggatagatt-gc-aaaaattttct-cccattctgtaggttggctgttcactctgatggtagtttctttt--gctgtgcagaagatctttagtttaattagatcccatttgtcaattttggcttttgttgccattgcttttggtgttttagtcatgaagtccttgcccatgcctatgtcctg-aatggtatt-gcctaggttttcctctagggtttttatggttttaggtct-aacatttaagtctttaatccatcttgaatcaatttttgcata i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1150278 535 + 81552678 atcctc--tccagca-tctg-ttg-tttcctgacttttt---aatgatc-gccattc-taactggtgtgagatggtatctcattgtggttttaatttgcattcctctaatgacctgtgatgatgaacattttttcacgtgtctgttggctgcataaatgtcttcttttaagaagtgtctgttcctatcctttgcccacttattgatgtggttgtttg-tttttttcttgtaaa-ttcattt-gcattctttgtagattctggatattagccctttgtcagatgggtagatg-gc-aaaaattttct-cccattctgtaggttgcctattcactctgatggtagtttctttt--gctgtacagaagctctttagtttaattagatcccatttgtctattttggcttttgttgccattgcttttggtgttttagtcatgaagtccttgcccatgtctatgtcctg-aatggtatt-acctaggtttacttctagggtttttatggttttagatct-aacatttaagtctttaatccatcttgaattaatttttgtata i nomLeu3.chr19 C 0 I 1343 s rheMac8.chr13 1480076 537 + 108979918 atcctc--tccagca-tctg-ttg-tttcctgacttctt---aatgatc-gccattc-taaccggtgtgagatggtatctcattttggtttcaatttgcgtttctctaatgacccgtgacgatgagcattttctcatgtgtctgttggctgcataaatgtcttcttttaagaagtgtcttttcatacgctttgcccactttttgatgtgattatttgttttttttcttgtaaa-tttgttt-aagttctttgtagattatggatattagccctttgtcagatgggtagatt-gcaaaaaattttct-cccattctgtaggttgtcttttcactctgatggtagtttctttt--gctgtgcagaagctctttagtttaattagatcccacttgtcaattttggcttttgttgccattgcttttagtgttttagtcatgaagtccttgcccatgcctatgtcctg-aatggtatt-gcctaggttttcttctagggtttttatggttttagatct-aacatttaagtctttaatccatcttgaattaatttttgcata i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1452523 537 - 111193037 atcctc--tccagca-tctg-ttg-tttcctgacttctt---aatgatc-accattc-taactggtgtgagatggtatctcattttggtttcaatttgcgtttctctaatgacccgtgacgatgagcattttctcatgtgtctgttggctgcataaatgtcttcttttaagaagtgtcttttcatacactttgcccactttttgatgtgattatttgttttttttcttgtaaa-tttgttt-aagttctttgtagattatggatattagccctttgtcagatgggtagatt-gcaaaaaattttct-cccattctgtaggttgtcttttcactctgatggtagtttctttt--gctgtgcagaagctctttagtttaattagatcccacttgtcaattttggcttttgttgccattgcttttagtgttttagtcatgaagtccttgcccatgcctatgtcctg-aatggtatt-gcctaggttttcttctagggtttttatggttttagatct-aacatttaagtctttaatccatcttgaattaatttttgcata i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1480457 541 + 3644372 atcctcgtcccagca-tctgtttg-tttcctgacttcttgaaaatgatcggccattcgtaaccggtgtgagatgg-atctcattttggtttcaatttgcatttctctaatgacccgtgacgatgagcattttctcatgtgtctgttggctgcacaaat-tcttc-tttaagaagtgtcttttcataccctttg-ccactttttgatgtgattatttggtttttcttttg-aaa-tttgttt-aagttctttgtagattatggatatta-ccctttgtcagatgggtagatt-gcaaaaaattttctccccattctgtaggttgtcttttcactctgatggtagtttctttt--gctgtgcagaagctctttagtttaattagatcccacttgtcaattttggcttttgttgccattgcttttagtgttttagtcatgaagtccttg-ccatgcctatgtcctgaaatggtattcgcctaggttttcttctagggtttttatggttttagatctaaacatttaagtctttaatccatcttg-attaatttttgcata i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1435218 519 - 10304083 atcctc--tccagca-tctg-ttg-tttcctgacttctt---aatgatc-gccattc-t-----------------atctcattttggtttcaatttgcatttctttaatgacccgtgacgatgagcattttctcatgtgtctgttggctgcataaatgtcttcttttaagaagtgtcttttcatatcctttgcccactttttgatgtggttgtttg-ttttcttcttgtaaa-tttgttt-aagttctttgtagattctggatattagccctttgtcagatgggtagatt-gcaaaaaattttct-cccattctgtaggttgtctgttcactctgatggtagtttctttt--gctgtgcagaagctctttagtttaataagatcccatttgtcaattttggcttttgttgccattgcttttagtgttttagtcatgaagtccttgcccatgcctatgtcctg-aatggtatt-gcctaggttttcttctagggtttttatggttttagatct-aacatttaagtctttaatccatcttaaattaatttttgcata i cerAty1.NW_012000820v1 C 0 C 0 e aotNan1.NW_018513311v1 171460 11 + 287728 I e mm10.chr12 90028706 1678 - 120129022 I e saiBol1.JH378218 1258939 0 - 7082604 C e cebCap1.NW_016107827v1 1352628 11 + 1864846 I e otoGar3.GL873658 951153 77 + 5252280 I e dasNov3.JH576208 1777275 305 + 4416731 I e calJac3.chr14 1430025 8 - 108792865 I e colAng1.NW_012118821v1 1432954 1523 - 13651311 I e manLeu1.NW_012103754v1 1000430 8418 - 2200435 I e chlSab2.chr14 1512295 2320 - 107702431 I a score=3276.000000 s hg38.chr2_KI270774v1_alt 168450 1 + 223625 a s panTro5.chr2A 1465558 1 + 111504155 a i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1403811 1 + 114371477 a i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1428207 1 + 1464242 a i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1152156 1 + 81552678 a i nomLeu3.chr19 I 1343 C 0 s rheMac8.chr13 1480613 1 + 108979918 a i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1453060 1 - 111193037 a i macFas5.chr13 C 0 I 1226 s macNem1.NW_012011978v1 1480998 1 + 3644372 a i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1435737 1 - 10304083 a i cerAty1.NW_012000820v1 C 0 C 0 e aotNan1.NW_018513311v1 171460 11 + 287728 I e mm10.chr12 90028706 1678 - 120129022 I e saiBol1.JH378218 1258939 0 - 7082604 C e cebCap1.NW_016107827v1 1352628 11 + 1864846 I e otoGar3.GL873658 951153 77 + 5252280 I e dasNov3.JH576208 1777275 305 + 4416731 I e calJac3.chr14 1430025 8 - 108792865 I e colAng1.NW_012118821v1 1432954 1523 - 13651311 I e manLeu1.NW_012103754v1 1000430 8418 - 2200435 I e chlSab2.chr14 1512295 2320 - 107702431 I a score=7200.000000 s hg38.chr2_KI270774v1_alt 168451 2 + 223625 gg s panTro5.chr2A 1465559 2 + 111504155 gg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1403812 2 + 114371477 gg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1428208 2 + 1464242 gg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1152157 2 + 81552678 gg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1480614 2 + 108979918 gg i rheMac8.chr13 C 0 I 1234 s macFas5.chr13 1454287 2 - 111193037 gg i macFas5.chr13 I 1226 C 0 s macNem1.NW_012011978v1 1480999 2 + 3644372 gg i macNem1.NW_012011978v1 C 0 I 1422 s cerAty1.NW_012000820v1 1435738 2 - 10304083 gg i cerAty1.NW_012000820v1 C 0 I 1233 e aotNan1.NW_018513311v1 171460 11 + 287728 I e mm10.chr12 90028706 1678 - 120129022 I e saiBol1.JH378218 1258939 0 - 7082604 C e cebCap1.NW_016107827v1 1352628 11 + 1864846 I e otoGar3.GL873658 951153 77 + 5252280 I e dasNov3.JH576208 1777275 305 + 4416731 I e calJac3.chr14 1430025 8 - 108792865 I e colAng1.NW_012118821v1 1432954 1523 - 13651311 I e manLeu1.NW_012103754v1 1000430 8418 - 2200435 I e chlSab2.chr14 1512295 2320 - 107702431 I a score=-25.000000 s hg38.chr2_KI270774v1_alt 168453 2 + 223625 -AT s panTro5.chr2A 1465561 2 + 111504155 -AT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1403814 2 + 114371477 -AT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1428210 2 + 1464242 -at i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1152159 2 + 81552678 -at i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1454289 2 - 111193037 ga- i macFas5.chr13 C 0 C 0 e aotNan1.NW_018513311v1 171460 11 + 287728 I e mm10.chr12 90028706 1678 - 120129022 I e saiBol1.JH378218 1258939 0 - 7082604 C e cebCap1.NW_016107827v1 1352628 11 + 1864846 I e otoGar3.GL873658 951153 77 + 5252280 I e dasNov3.JH576208 1777275 305 + 4416731 I e calJac3.chr14 1430025 8 - 108792865 I e colAng1.NW_012118821v1 1432954 1523 - 13651311 I e manLeu1.NW_012103754v1 1000430 8418 - 2200435 I e chlSab2.chr14 1512295 2320 - 107702431 I e cerAty1.NW_012000820v1 1435740 1233 - 10304083 I e macNem1.NW_012011978v1 1481001 1422 + 3644372 I e rheMac8.chr13 1480616 1234 + 108979918 I a score=140352.000000 s hg38.chr2_KI270774v1_alt 168455 27 + 223625 TTTCGCATCGATGTTTATCAGGTCTCA s panTro5.chr2A 1465563 27 + 111504155 TTTCACATCGATGTTCATCAGGTCTCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1403816 27 + 114371477 TTTCACATCGATGTTCATCAGGTCTCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1428212 27 + 1464242 tttcgcatcgatgttcatcaggTCTCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1152161 27 + 81552678 tttcacatggatgttcatcagGTCTCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1481850 27 + 108979918 tttctcatcgatgttcatcaGTTCTCC i rheMac8.chr13 I 1234 C 0 s macFas5.chr13 1454291 27 - 111193037 tttctcatcgatgttcatcaGTTCTCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1482423 27 + 3644372 tttctcatcgatgttcatcagTTCTCC i macNem1.NW_012011978v1 I 1422 C 0 s cerAty1.NW_012000820v1 1436973 27 - 10304083 tttctcatcgatgttcatcaGTTCTCC i cerAty1.NW_012000820v1 I 1233 C 0 s chlSab2.chr14 1514615 27 - 107702431 tttctcatcgatgttcaacaGTTCTCC i chlSab2.chr14 I 2320 C 0 s manLeu1.NW_012103754v1 1008848 27 - 2200435 tttctcatcgatgttcatcagTTCTCC i manLeu1.NW_012103754v1 I 8418 C 0 s colAng1.NW_012118821v1 1434477 27 - 13651311 tttctcatcgatgttcatcaGTTCTCC i colAng1.NW_012118821v1 I 1523 C 0 e aotNan1.NW_018513311v1 171460 11 + 287728 I e mm10.chr12 90028706 1678 - 120129022 I e saiBol1.JH378218 1258939 0 - 7082604 C e cebCap1.NW_016107827v1 1352628 11 + 1864846 I e otoGar3.GL873658 951153 77 + 5252280 I e dasNov3.JH576208 1777275 305 + 4416731 I e calJac3.chr14 1430025 8 - 108792865 I a score=260096.000000 s hg38.chr2_KI270774v1_alt 168482 33 + 223625 CTTCTTTCTTATGACTCATCGCAGCCGTGCAGA s panTro5.chr2A 1465590 33 + 111504155 CTTCTTTCTTATGACTCATCGCAGCCGTGCAAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1403843 33 + 114371477 CTTCTTTCTTATGACTCATCGCAGCCGTGCAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1428239 33 + 1464242 CTTCTTTCTTATGACTCATCGCAGCCGTGCAGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1152188 33 + 81552678 CTTCTTTCTTACGACTCATCGCAGCCATGCAGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1481877 33 + 108979918 CTTCTTTCTTATGACTCACCACAGCCATGCAGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1454318 33 - 111193037 CTTCTTTCTTATGACTCACCACAGCCATGCAGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1482450 33 + 3644372 CTTCTTTCTTATGACTCACCACAGCCATGCAGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1437000 33 - 10304083 CTTCTTTCTTATGACTCACCACAGCCATGCAGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1514642 33 - 107702431 CTTCTTTCTTATGACTCACCACAGCCATGTAGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1008875 33 - 2200435 CTTCTTTCTTATGACTCACCACAGCCATGCAGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1434504 33 - 13651311 CTTCTTTCTTATGACTCACCACAGCCATGCAGA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1258939 32 - 7082604 CTTCTTTGCAATGACTCTCTGCAGCC-AGCAGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1352639 33 + 1864846 CTTCTTTCCGATGACTCTCTGCAGCCAAGCAGA i cebCap1.NW_016107827v1 I 11 C 0 s aotNan1.NW_018513311v1 171471 33 + 287728 CTTCTTTCCGATGACTCTCTGCAGCCAAGCAGA i aotNan1.NW_018513311v1 I 11 C 0 e mm10.chr12 90028706 1678 - 120129022 I e otoGar3.GL873658 951153 77 + 5252280 I e dasNov3.JH576208 1777275 305 + 4416731 I e calJac3.chr14 1430025 8 - 108792865 I a score=959801.000000 s hg38.chr2_KI270774v1_alt 168515 91 + 223625 CCTTCCGTATGGG-CACACTTGCTGATCCTACACAAGGTTTTTAATATCTGTGGGGAAAATAAATGTGTTTAAAGCATTTTAAAAGGCTAAA s panTro5.chr2A 1465623 91 + 111504155 CCTTCCGTATGGG-CACACTTGCTGATCCTACACAAGGTTTTTAATATCTGTGGGGAAAATACATGTGTGTAAAGCACTTTAAAAGGCTAAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1403876 91 + 114371477 CCTTCCATATGGG-CACACTTGCTGATCCTACACAAGGTTTTTAATATCTGTGGGGAAAATACATGTGTGTAAAGCATTTTAAAAGGCTAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1428272 91 + 1464242 CCTTCCGTATGGG-CACACTTGCTGATCCTACACAAGGTTTTTAATATCTGTGGGGAAAATAAATGTGTTTAAAGCATTTTAAAAGGCTAAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1152221 91 + 81552678 CCTTCCGTATGGG-CACATTTGCTGACCCTACACAAGGTTTTTAATATATGTGGGGAAAACAAATGTGTTTAAAGCATTTTAAAAGGCTAAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1481910 91 + 108979918 CCTTCCGTATGGG-CACACTTGCTGATCCTACACAGGGTTTTTAATATCTGTGGGGAAAATAAATGTGTTTAAAGCATTTTAAAAGGCTAAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1454351 91 - 111193037 CCTTCCGTATGGG-CACACTTGCTGATCCTACACAGGGTTTTTAATATCTGTGGGGAAAATAAATGTGTTTAAAGCATTTTAAAAGGCTAAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1482483 91 + 3644372 CCTTCCGTATGGG-CACACTTGCTGATCCTACACAGGGTTTTTAATATCTGTGGGGAAAATAAATGTGTTTAAAGCATTTTAAAAGGCTAAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1437033 91 - 10304083 CCTTCCGTATGGG-CACACTTGCTGATCCTACACAGGGTTTTTAATATCTGTGGGGAAAATAAATGTGTTTAAAGCATTTTAAAAGGCTAAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1514675 91 - 107702431 CCTTCCGTATGGG-CACACTTGCTGATCCTATACAAGGTTTTTAATATCTGTGGGGAAAATAAATGTGTTTAAAGCATTTTAAAAGGCTAAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1008908 91 - 2200435 CCTTCCGTATGGG-CACACTTGCTGATCCTACACAGGGTTTTTAATATCTGTGGGGAAAATAAATGTGTTTAAAGCATTTTAAAAGGCTAAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1434537 91 - 13651311 CCTTCTGTATGGG-CACACTTGCTGATCCTGCGCAAGGTTTTTAATATCTGTGGGGAAAATAAATGTGTTTAAAGCATTTTAGAAGGCTAAA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1430033 90 - 108792865 CTCTCCGTGTGGG-CACACGTGCTGATCCTACACAAGG-TTTTAATATGTATGGGGAAAATAAATGTGTTTAAAGCATTTTAAAAGGCTAAA i calJac3.chr14 I 8 C 0 s saiBol1.JH378218 1258971 92 - 7082604 CGTTCCATGTGGGCCGCACGTGCTGATCCTACGCAAGGTTTTTAATATCTATGGGGAAAATAAATGTGTTTAAAGTGTTTTAAAAGGCTAAA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1352672 91 + 1864846 CCTTCCATGTGGG-CACACGTGCTGATCCTACACAAGGATTTTAATATCTATGGGGAAAATAAATGTGTTTAAAGCATTTTAAAAGGCTAAA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 171504 91 + 287728 CCTTCCATGTGGG-CACACGTGCTGATCCTACACAAGGTTTGTAATATCTATGGGGAAAATAAATGTGTTTAAAGCATTTTAAAAGGCTAAA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 951230 87 + 5252280 CCCTCCCCATAGG-TGCATGAGCTG-TGCTGTCCACGCTTT---ATACATGTATGGGGAACTGGTTTGCTCAAAGCTTTGTAAAAGGCCAAA i otoGar3.GL873658 I 77 I 179 e mm10.chr12 90028706 1678 - 120129022 I e dasNov3.JH576208 1777275 305 + 4416731 I a score=77477.000000 s hg38.chr2_KI270774v1_alt 168606 9 + 223625 CTGGGCTca s panTro5.chr2A 1465714 9 + 111504155 CTGGGCTca i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1403967 9 + 114371477 CTGGGCTca i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1428363 9 + 1464242 CTGGGCTca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1152312 8 + 81552678 CTGggc-ca i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1482001 9 + 108979918 CTGGGCcca i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1454442 9 - 111193037 CTGGGCcca i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1482574 9 + 3644372 CTGGGCcca i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1437124 9 - 10304083 CTGGGCcca i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1514766 9 - 107702431 CTGGGCcca i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1008999 9 - 2200435 CTGGGCCCA i manLeu1.NW_012103754v1 C 0 T 6398 s colAng1.NW_012118821v1 1434628 9 - 13651311 CTGGGCcca i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1430123 9 - 108792865 CTGGGGCCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1259063 9 - 7082604 CCAGggcca i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1352763 9 + 1864846 CTGGggcca i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 171595 9 + 287728 CTGGggcca i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90028706 1678 - 120129022 I e otoGar3.GL873658 951317 179 + 5252280 I e dasNov3.JH576208 1777275 305 + 4416731 I a score=423191.000000 s hg38.chr2_KI270774v1_alt 168615 47 + 223625 ggcacg--gtggcttacacctgtaatcccagcactttgggaggctgagg s panTro5.chr2A 1465723 47 + 111504155 ggcacg--gtggctcacacctgtaatcccagccctttgggaggctgagg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1403976 47 + 114371477 ggcacg--gtggctcacacctgtaatcccagccctttgggaggctgagg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1428372 47 + 1464242 ggcacg--gtggctcacacctgtaatcccagcactttgggaggctgagg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1152320 47 + 81552678 ggcaca--gtggctcacgcctgtaatcccagcactttgggaggctgagg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1482010 47 + 108979918 gacatg--gtggttcacgcctgtaatcccagcactttgggaggccgagg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1454451 47 - 111193037 gacatg--gtggttcacgcctgtaatcccagcactttgggaggccgagg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1482583 47 + 3644372 gacatg--gtggttcacgcctgtaatcccagcactttgggaggccgagg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1437133 47 - 10304083 gacatg--gtggttcacacctgtaatcccagcactttgggaggccgagg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1514775 47 - 107702431 gacatg--atggttcacacctgtaatcccagcactttgggaggccgagg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1002610 47 - 2200435 ggcaca--gtggctcatgcctgtaatcctagcactttgggaggccgagg i manLeu1.NW_012103754v1 T 6398 C 0 s colAng1.NW_012118821v1 1434637 47 - 13651311 gacatg--gtggttcatgcctataatcccagcactttgggaggccgagg i colAng1.NW_012118821v1 C 0 M 5693 s calJac3.chr14 1430132 49 - 108792865 TGTGCAGTgtggctcacacctgtaatcccagcactttgggagtccaagg i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1259072 46 - 7082604 ggtgc---gtggctcacaccagtagtcccagcactttgggattccaagg i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1352772 47 + 1864846 ggtgca--gtggctcaaaactgtaatcccagcactttgggagtccaagg i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 171604 47 + 287728 ggtgcg--gtggctcacacctgtaatcccagcactttgggagtccaagg i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90028706 1678 - 120129022 I e otoGar3.GL873658 951317 179 + 5252280 I e dasNov3.JH576208 1777275 305 + 4416731 I a score=1735126.000000 s hg38.chr2_KI270774v1_alt 168662 249 + 223625 caggcggatcacttgaggtcgggagtttgagaccagcctggccaacatggtgaaa-ccccatctctactaaaaatac-----aaaataaacaaacaaaaaacattagccgtgtgt-ggtggcagatgcctgtag--tcagctactcaggaggctgtggcaggagaatcg-cttgaacctgggaggcagagggtgcaggtgagccgagatctcaccattgcattccagactgggcaacagagt--gaaactccatttGaaaa---- s panTro5.chr2A 1465770 245 + 111504155 caggtggatcacttgaggtcaggagtttgagaccagcctggccaacatggtgaaa-ccccatctctactaaaaatac-----aaaataaacaaa----aaacattagccgggtgt-ggtggcaggtgcctgtag--tcagctactcaggaggctgtggcaggagaatcg-cttgaacctgggaggcagagggtgcaggtgagccgagatctcgccattgcattccagactgggcagcagagt--gaaactccatttGaaaa---- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1404023 245 + 114371477 caggtggatcacttgaggtcaggagtttgagaccagcctggccaacatggtgaaa-ccccatctctactaaaaatac-----aaaataaacaaa----aaacattagccgggtgt-ggtggcaggtgcctgtag--tcagctactcaggaggctgtggcaggagaatcg-cttgaacctgggaggcagagggtgcaggtgagccgagatctcgccattgcattccagactgggcagcagagt--gaaactccatttGaaaa---- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1428419 245 + 1464242 caggcggatcacttgaggtcgggagtttgagaccagcctggccaacatggtgaaa-ccccatctctactaaaaatac-----aaaataaacaaacaaaaaacattagccgggtgt-ggtggcaggtgcctgtag--tcagctactcaggaggctgtggcgggagaatcg-cttgaacccgggaggcagagggtgcaggtgagccgagatctcaccattgcattccagactgtgcaacagagt--gaaactccatttg-------- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1152367 239 + 81552678 caggtggatcacttgaggtcgggagtgtgagaccagcctggccaacatggtgaaa-ccccgtctttactaaaaatac-----aaa--aaaaaaa----aaaagttagccgggtgt-ggtggtgggtgcctgtag--tcagctacacaggaggctgtggcaggagaatcg-cttgaacctgggaggcagaggttgcaggtgagccgagatcttgccattgcattccagcctgggcaacagagt--gaaactccatttc-------- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1482057 243 + 108979918 caggtggatcacttgaggtcgggagtttgagaccagcctggccaacatggtgaaa-ccctgtctctactaaaaatac-----aaaaaaaaaaaa----aaaaattagccaggcgt-ggtggcgggtgcttgtagtctcagctacttgagaggctgtggcaggagactcg-cttgaacctgggaggcagaggttgcaggtgagccgagatctcgcttttgcattccagactgggcaacagagt--gaaaatccatttg-------- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1454498 243 - 111193037 caggtggatcacttgaggtcgggagtttgagaccagcctggccaacatggtgaaa-ccctgtctctactaaaaatac-----aaaaaaaaaaaa----aaaaattagccaggcgt-ggtggcgggtgcttgtagtctcagctacttgagaggctgtggcaagagactcg-cttgaacctgggaggcagaggttgcaggtgagccgagatctcgcttttgcattccagactgggcaacagagt--gaaaatccatttg-------- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1482630 218 + 3644372 caggtggatcacttgaggtcgggagtttgagaccagcctggccaacatggtgaaa-ccctgtctctactaaaaatac------aaaaaaaaaaa----aaaaattagccaggcgtgggtggcgggggcttgtagtctcagctacttgagaggctgtggcaggggactcaccttgaacctgggaggcaga--------------------------tttgcattccagactgggcaacagagt--gaaaatccatttg-------- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1437180 239 - 10304083 caggtggatcacttgaggtcgggagtttgagaccagcctggccaacatggtgaaa-ccctgtctctactaaaaatac---------aaaaaaaa----aaaaattagccaggcgt-ggtggcgggcgcctgtagtctcagctactcgagaggctgtggcaggagactcg-cttgaacccgggaggcagaggttgcaggtgagccgagatcttgccatcgcattccagactgggcaacagagt--gaaaatccgtttc-------- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1514822 248 - 107702431 caggtggatcacttgaggtcgggagtttgagaccagcctggccaacatggtgaaa-ccctgtctctactaaaaatacaaaaaaaaaaaaaaaaa----aaaaaatagccaggcgt-ggtggtgggtgcctgtagtctcagctactcgagaggctgtggcaggagactcg-cttgaacccgggaggcagaggttgcaggtgagctgagatcttgccattgcattccagattgggcaacagagt--gaaaatccatttc-------- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1002657 240 - 2200435 caggtggatcacttgaggtcgggagtttgagaccagcctggccaacatggtgaaa-ccctgtctctactaaaaatac--------aaaaaaaaa----aaaagttagccaggcgt-ggtggcgggtgcctgtagtctcagctgctcgagaggctgtggcaggagactcg-cttgaacccgggaggcagaggttgcaggtgagccgagatcttgccattgcattccagattgggcaacagagt--gaaaatccgtttc-------- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1430181 236 - 108792865 -cagtgaatcacttgaggtcgggagtttgagaccaccttggccaatatggtaaaacccccatccctactaaaaatac--------------aaa----aaaaattcgctgggcat-ggcggtggctgcctgtggtcccagctacacaggaggctgaggcaggagaattg-cttgaacccacgaggcagaggttgcg-gtgagccaagatctcaccattgcattccagtctgggtgacagagcaaaaaactccattta----a--- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1259118 232 - 7082604 -cagtggatcacttgaggtcaggagtttgagactaccttggccaatatggtgaaacccctatccctactaaaaatac---------------aa----aaaaattagctgggcat-ggtggtggctgcctgtggtcccagctactcgggaggctgaggcaggagaattg-cttgaatctgggaggcagaggttgca-gtgagccgagatcgcaccattgcatt-cagactgggtgacagagc--aaaactccattta----a--- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1352819 235 + 1864846 -cagtggatcacttgaggtcaggagtttgagactgccttggccaatatggtgaaacccccatccctactaaaaatac-------------aaaa----agaaattagctgggcat-ggtggtggctgcctgtggtcccagctactcgggaggctgaggcaggagaattg-cttgaacccgggaggcagaggttgca-gtgagtcgagatctcaccattgtattccagactgggtgacagagc--aaaactccattta----a--- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 171651 236 + 287728 -gagtggatcacttgaggtcgtgagtttgagaccaccttggcc-acatggtgaaacccccatccctactaaaaatac--------------aaa----aaaaattagttgggcat-agtggtggctgcctgtggtcccagctactcaggaggctgaggcaggagaattg-cttgaacacgggagacagaggttgca-gtgagccgagatctcgccattgtactccatactgggtgacagagc--aaaactccattta----aaaa i aotNan1.NW_018513311v1 C 0 I 296 e mm10.chr12 90028706 1678 - 120129022 I e otoGar3.GL873658 951317 179 + 5252280 I e dasNov3.JH576208 1777275 305 + 4416731 I e colAng1.NW_012118821v1 1434684 5693 - 13651311 M a score=10647.000000 s hg38.chr2_KI270774v1_alt 168911 9 + 223625 taaaataaa s panTro5.chr2A 1466015 9 + 111504155 taaaataaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1404268 9 + 114371477 taaaataaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1428664 8 + 1464242 -aaaataaa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1152606 8 + 81552678 -aaaataaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1482300 3 + 108979918 ------aaa i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1454741 3 - 111193037 ------aaa i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1482848 3 + 3644372 ------aaa i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1437419 3 - 10304083 ------aaa i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1515070 3 - 107702431 ------aaa i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1002897 3 - 2200435 ------aaa i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1430417 3 - 108792865 ------aat i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1259350 3 - 7082604 ------aaa i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1353054 3 + 1864846 ------aaa i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 172183 4 + 287728 -----taaa i aotNan1.NW_018513311v1 I 296 C 0 e mm10.chr12 90028706 1678 - 120129022 I e otoGar3.GL873658 951317 179 + 5252280 I e dasNov3.JH576208 1777275 305 + 4416731 I e colAng1.NW_012118821v1 1434684 5693 - 13651311 M a score=205932.000000 s hg38.chr2_KI270774v1_alt 168920 25 + 223625 ataaaata----aaaataaaaGGCTAAAC- s panTro5.chr2A 1466024 25 + 111504155 ataaaata----aaaataaaaGGCTAAAC- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1404277 25 + 114371477 ataaaata----aaaataaaaGGCTAAAC- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1428672 25 + 1464242 gtaaaata----aaaataaaaGGCTAAAC- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1152614 25 + 81552678 ataaaata----aaaataaaaGGCTAAAC- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1482303 25 + 108979918 ataaaata----aaaataaaaGGCTAAAC- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1454744 25 - 111193037 ataaaata----aaaataaaaGGCTAAAC- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1482851 25 + 3644372 ataaaata----aaaataaaaGGCTAAAC- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1437422 25 - 10304083 ataaaata----aaaataaaaGGCTAAAC- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1515073 25 - 107702431 ataaaata----aaaataaaaGGCTAAAC- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1002900 25 - 2200435 ataaaata----aaaataaaaGGCTAAAC- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1430420 29 - 108792865 ataatatataataaaaTTAAGGGCTAAAC- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1259353 29 - 7082604 attaaatataataaaaTTAAAGACTAAAC- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1353057 29 + 1864846 ataaaatataataaaaTTAAAGGCTAAAC- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 172187 29 + 287728 ataaaataaaataaaataaaaGGCTAAAC- i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1777580 26 + 4416731 ataatata----aatatataatattaaGAT i dasNov3.JH576208 I 305 C 0 e mm10.chr12 90028706 1678 - 120129022 I e otoGar3.GL873658 951317 179 + 5252280 I e colAng1.NW_012118821v1 1434684 5693 - 13651311 M a score=1962650.000000 s hg38.chr2_KI270774v1_alt 168945 233 + 223625 TGTTCTATAG---------------TTATGATCAGCACCAT-CATCTTTAGAATGTTAAT-GATGGGTTACCTTTGGAAGTTAATTATTTGGAAGAAAATGATCCTATTCCCCCAATTAGTTTTTTGGAAGGGTTATTTTTAAGC-TTCCCCATTTTTTCTTTATATTCCTTTCCCAGTAGTCTGTAAGTCCTTCTGGGAGCTTCTAACCTGTCTCAAAAGTTGACCGGCTCCAGGC----GTA-GTGG-GGAGTGG s panTro5.chr2A 1466049 233 + 111504155 TGTTCTATAG---------------TTATGATCAGCACCAT-CATCTTTAGAATGTTAAT-GATGGGTTACCTTAGGAAGTTAATTATTTGGAAGAAAATGATCCTATTCCCCCAGTTAGTTTTTTGGAAGGGTTATTTTTAAGC-TTCCCCATTTTTTCTTTATATTCCTTTCCCAGTAGTCTGTAAGTCTTTCTGGGAGCTTCTAACCTGTCTCAAAAGTTGACTGCCTCCAGGT----GTA-GTGG-GGAGTGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1404302 233 + 114371477 TGTTCTATAG---------------TTATGATCAGCACCAT-CATCTTTAGAATGTTAAT-GATGGGTTACCTTAGGAAGTTAATTATTTGGAAGAAAATGATCCTATTCCCCCAGTTAGTTTTTTGGAAGGGTTATTTTTAAGC-TTCCCCATTTTTTCTTTATATTCCTTTCCCAGTAGTCTGTAAGTCTTTCTGGGAGCTTCTAACCTGTCTCAAAAGTTGACTGGCTCCAGGT----GTA-GTGG-GGAGTGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1428697 233 + 1464242 TGTTCTATAG---------------TTACGATCAGCACCAT-CATCTTTAGAATGTTAAT-GATGGGTTACCTTTGGAAGTTAATTATTTGGAAGAAAATGATCCTATTCCCCCAATTAGTTTTTTGGAAGGGTTATTTTTAAGC-TTCCCCATTTTTTCTTTATATTCCTTTCCCAGTAGTCTATAAGTCTTTCTGGGAGCTTCTAACCTGTCTCAAAAGTTGACTGGCTCCAGGT----GTA-GTGG-GGAGTGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1152639 233 + 81552678 TGTTCTACAG---------------TTATGATCAGCACCAC-CATCTTTAGAATGTTAAT-GATGGGTTACCTTTGGAAGTTAAATATTTGGGAGAAAATTATCCTATTCCCCCAATTAGTTTTTTGGAAGGGTTATTTTTAAGC-CTCCCCATTTTTTCTTTATATTCCTTTCCCAGTACTCTGTATGTCTTTCTGGGAGCTTCTACCCTGTCTCAAAAGTTGACCGGCTCCAGGT----GTA-GTGG-GGAGTGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1482328 233 + 108979918 CATTCTATAG---------------TTATGATCAGCACCCT-CATCTTTAGAATGTTAAT-GATGGGTTACCTTTGGAAGTTAATTATTTGGAAGAAAATGATTCTATTCCCCCAGTTAGTTTTTTGGAAGGGTTATTTTTAAGC-TTCCCCATTTTTTCTTTATGTTCCTTTCCCAGTACTCTGTGTGTCTTTCTGGGAGCTTCTAACCTGACTCAAAAGTTGACCGGCTCCAGGT----GTA-GTGG-GGAGAGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1454769 233 - 111193037 CATTCTATAG---------------TTATGATCAGCACCCT-CATCTTTAGAATGTTAAT-GATGGGTTACCTTTGGAAGTTAATTATTTGGAAGAAAATGATTCTATTCCCCCAGTTAGTTTTTTGGAAGGGTTATTTTTAAGC-TTCCCCATTTTTTCTTTATGTTCCTTTCCCAGTACTCTGTGTGTCTTTCTGGGAGCTTCTAACCTGACTCAAAAGTTGACCGGCTCCAGGT----GTA-GTGG-GGAGAGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1482876 233 + 3644372 CATTCTATAG---------------TTATGATCAGCACCCT-CATCTTTAGAATGTTAAT-GATGGGTTACCTTTGGAAGTTAATTATTTGGAAGAAAATGATTCTATTCCCCCAGTTAGTTTTTTGGAAGGGTTATTTTTAAGC-TTCCCCATTTTTTCTTTATGTTCCTTTCCCAGTACTCTGTGTGTCTTTCTGGGAGCTTCTAACCTGACTCAAAAGTTGACCGGCTCCAGGT----GTA-GTGG-GGAGAGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1437447 233 - 10304083 TGTTCTATAG---------------TTATGATCAGCACCCT-CATCTTTAGAATGTTAAT-GATGGGTTACCTTTGGAAGTTAATTATTTGGAAGAAAATGATCCTATTCCCCCAATTAGTTTTTTGGAAGGGTTATTTTTAAGC-TTCCCCATTTTTTCTTTACGTTCCTTTCCCAGTACTCTGTGTGTCTTTCTGGGAGCTCCTAACCTGACTCAAAAGTTGACTGGCTCCAGGT----GTA-GTGG-GGAGTGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1515098 233 - 107702431 TGTTCTATAG---------------TTATGATCAGCACCCT-CATCTTTAGAATGTTAAT-GATGGGTTACCTTTGGAAGTTAATTATTTGGAAGAAAATGATCCTATTCCCCCAATTAGTGTTTTGGAAGGGTTATTTTTAAGC-GTCCCCATTTTTTCTTTATGTTCCTTTCCCAGTACTCTGTGTGTCTTTCTGGGAGCTTCTAACCTGACTCAAAAGTTGACCGGCTCCAGGT----GTA-GTGG-GGAGTGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1002925 233 - 2200435 TGTTCTATAG---------------TTATGATCAGCACCCT-CATCTTTAGAATGTTAAT-GATGGGTTACCTTTGGAAGTTAATTATTTGGAAGAAAATGATCCTATTCCCCCAATTAGTTTTTTGGAAGGGTTATTTTTAAGC-TTCCCCATTTTTTCTTTATGTTCCTTTCCCAGTACTCTGTGTGTCTTTCTGGGAGCTCCTAACCTGACTCAAAAGTTGACCGGCTCCAGGT----GTA-GTGG-GGAGTGG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1430449 226 - 108792865 TGTTCTATGG---------------TTATGAAAAGCACCAT-CA-CTTTAGGATGTTAAT-GATGGGTTACCTTTGGAAGTTATCTATTCAGAAGCAAATCATCTGA-T-TCCCAATTCATTTTTTGGAAAAGTTAATTTTAAGCTTCCCCCACTTTTTATTTCTATTCCTTTCCCAGTACTCTGTGTGTCCTTCTGGAAGCTTCTAACCTGTCGCAAAAGTTGAC-GGCTCCCGGT--------GCGG-GGAGTG- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1259382 230 - 7082604 TATTCTGTGG---------------TTATGAAAAGCATCAT-CA-CTTTAGGATGTTAAT-GGTGGGTCACCTTTGGAAGTTAACTATTTGGAAGCAAAGGATCTGACT-CCCCAATTCATTTTTTGGAAAAGTTAATTTTCAGCTTCCCCCACTTTTTATTTCTATTCCTTTCCCAGTACTCGATGTGTCCTTCTGGAAGCTTCTAACCTGTCTCAGAAGTTGAC-GGCTCCTGGT----GTG-GTGG-GGTGGG- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1353086 222 + 1864846 TGTTCTATGG---------------TTATGAAAAGCACCAT-CA-CTTTAGGATGTTAAT-GATGAGTTACCTTTGGAAGTTAACTA----GAAGCAAATGATCTGATT-CCCCAATTCAGTTTTTGGAAAAGTTAATTTTCAGC-TCCCCCACTTTGTATTCCTATTCCTTTCCCAGTGCTCTATGTGTC---CTGGAAGCTTCTAACGTGTCGCAGAAGTTGAT-GGCTCCCGGT----GTG-GTGG-GGAGTG- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 172216 227 + 287728 TGTTCTATGG---------------TTATGAAAAGCACCAT-CA-CTTTAAGACGTTAAT-GATGGGTTACCTTTGGAAGTTAAATATTTAGAAGCAAATGATCTGATT-CCCCAATTCATGTTTTGG-AAAGTTAATTTTAAGCTTCCCTCACATTTTATTTCTATTCCTTTCCCAGTACTCTATGTGTCCT-CTGGAAGCTCTTAACCTGTCTCAAAAGTTGAT-GGCTCCCGGT----GTG-GGGG-AGTG-G- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 951496 215 + 5252280 TGTTCTGTGG---------------TTACAATCAATTCCGT-AAGCTTTAGAAAGTTAATAGTTGGGTTACTTTCAGACATGAACTGTTTGGAGGAAA--CATTCTAATTCCCTGGTGAGTTTTTCAGAAGGATTGTTTTTATAC-TTTCCTA------------------TTCCCAGGGTTCTGTAAGTCTGTCTGGAAGCTTTTAACCCATCTTGAAAGCTGGTTTACTCTGAGT----GTGTGTGG-GGAGTTG i otoGar3.GL873658 I 179 C 0 s dasNov3.JH576208 1777606 249 + 4416731 TTCTTTATAGATAAACACTTTGTTTCTATGTTCAACCCCATATAGCTTTAAAATGTTGAA-AATTGGTTACCTTTC-AAGTGAATTGTTTGAA---AAATGTTTTTAACTCATTGGCTAGGCTTTTGGAAAGGTTATTTTTTCTC-CCCTCACACTTCCTTTCTTCTTCCTTTCCAACTCTTCTTTATGCCCGTCTGGAAGCTTCTAACCAATCTCAAAAATGGAT-TAATCCAAGTGGCTGTA-GTGGTGGAATGG i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90028706 1678 - 120129022 I e colAng1.NW_012118821v1 1434684 5693 - 13651311 M a score=3179669.000000 s hg38.chr2_KI270774v1_alt 169178 355 + 223625 GGAGGGCAGGGGTGCTG------CAGTGCGTCCGGCGATA----------------CCTGCTTAGATGAGAGCTGAG-TCATGCACAGTGCACCA----GAGGGG---C----AAGGGCCAGCCTGGCCCTCAGCAGGT-GCCCGGCATTTGAAGACACCCAGGTCATCCCACACAGGACGATGCATGTCGTGATTTCTAAGTC-TTCCTTT-TGGGCATCCTAAGGCCAAACCGATCC-TTTAAAGACTCTGGTGGCATGCAGTGGTGGGTTCACACGCCACTGA-GATAGACCGACCCTGACAGGCCGTGGGGCCTGCTTTCCATGCGGG-----------------------GCCTTTGGAGATGACA--GGAACAGTGGT-CCCCAGGCACCCTGGCC-ACTCCCTCAGCTAAGCTG s panTro5.chr2A 1466282 355 + 111504155 GGAGGGCAGGGGTGCTG------CAGTGCATCCAGCGATA----------------CCTGCTTAGATGAGAGCAGAG-TCATGCACAGTGCCCCA----GAGGGG---C----AAGGGCCAGCCTGGCCCTCAGCAGGT-GCCCGGCATTTGAAGACACCCAGGTCATCCCACACAGGACGATGCATGTCGTGATTTCTAAGTC-TTCCTTT-TGGGCATCCTAAGGCCAAACCCATCC-TTTAAAGACTCTGGTGGCATGCAGTGGTGGGTTCACACGCCACTGA-GATAGAGGGACCCTGACAGGCCGTGGGGCCTGCTTTCCATGTGGG-----------------------GCCTTTGGAGATGACA--GGAACAGTGGT-CCCCAGGCACCCTGGCC-ACTCCCTCAGCTAAGCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1404535 355 + 114371477 GGAGGGCAGGGGTGCTG------CAGTGCATCCAGCGATA----------------CCTGCTTAGATGAGAGCAGAG-TCATGCGCAGTGCCCCA----GAGGGG---C----AAGGGCCAGCCTGGCCCTCAGCAGGT-GCCCGGCATTTGAAGACACCCAGGTCATCCCACACAGGACGATGCATGTCGTGATTTCTAAGTC-TTCCTTT-TGGGCATCCTAAGGCCAAACCCATCC-TTTAAAGACTCTGGTGGCATGCAGTGGTGGGTTCACACGCCACTGA-GATAGAGGGACCCTGACAGGCCGTGGGGCCTGCTTTCCATGCGGG-----------------------GCCTTTGGAGATGACA--GGAACAGTGGT-CCCCAGGCACCCTGGCC-ACTCCCTCAGCTAAGCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1428930 355 + 1464242 GGAGGGCAGGGGTGCTG------CAGTACGTCCGGCGATA----------------CCTGCTTAGATGAGAGCTGAG-TCATGCACAGTGCACCA----GAGGGG---C----AAGGGCCAGCCTGGCCCTCAGCAGGT-GCCCGGCATTTGAAGACACCCAGGTCATCCCACACAGGACGATGCATGTCGTGATTTCTAAGTC-TTCCTTT-TGGGCATCCTAAGGCCAAACCGATCC-TTTAAAGACTCTGGTGGCATGCAGTGGTGGGTTCACACGCCACTGA-GATAGAGGGACCCTGACAGGCCGTGGGGCCTGCTTTCCATGCGGG-----------------------GCCTTTGGAGATGACA--GGAACAGTGGT-CCCCAGGCACCCTGGCC-ACTCCCTCAGCTAAGCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1152872 355 + 81552678 GGAGGGCAGGGGTGCTG------CAGTGTGTCCAGCGATA----------------CCTGCTTAGATGACAGCTGAG-TCATGCACAGTGCGCCA----GAGAGG---C----AGGGGCCGGCCTGGCCCTCAGCAGGT-GCCCGGCATTTGAAGACACCCAGGTCATCCCACACAGGACGATGCACGTCGTGATTTCTAAGTC-TTCCTTT-TGGGCATCTTAAGGCCAAACTGATCC-TTTAAAGACTCTGGTGGCATGCAGTGGTGGGTTCACGTGCCATTGA-GAGAGAGGAACCCTGACAGGTGGTGGGGCCTGCTTTCTACACGGG-----------------------GCCTTTGGAGATGACA--GCAACAGTGGT-CCCCAGGCACCCTGGCC-ACCCCCTCAGCTAAGCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1482561 346 + 108979918 GGAGGGCAGGGGTGCGG------CAGTGTGTCTAGCGATG----------------CCTGCTTAGATGAGAGCTGAG-TCATGCACAGTGCACCA----GAGAGG---C----AGGGGCTGGCCCGGCCCTCAGCAGGT-ACCTGGCATTTGAAGACACCCAGGTCATCCCACACAGGACGATGCACGTCGTGATTCCTAAGTC-TTCCTTT-TGGGCATCCTAAGGCCAAA------C-TTTAAAGA--CTGGTGGCATGCAGTGGTGGGTTCACACGCCACTGA-GATAGAGGGACCCTGA-AGGCGGTGGGGCCTGCTTTCCACACGGG-----------------------GCCTTTGGAAATGACA--GGAACAGTGGT-CCCCAGGCACCCTGGCC-ACTCCCTCAGCTAAGCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1455002 346 - 111193037 GGAGGGCAGGGGTGCGG------CAGTGTGTCTGGCGATG----------------CCTGCTTAGATGAGAGCTGAG-TCATGCACAGTGCACCA----GAGAGG---C----AGGGGCTGGCCCGGCCCTCAGCAGGT-ACCTGGCATTTGAAGACACCCATGTCATCCCACACAGGACGATGCACGTCGTGATTCCTAAGTC-TTCCTTT-TGGGCATCCTAAGGCCAAA------C-TTTAAAGA--CTGGTGGCATGCAGTGGTGGGTTCACACGCCACTGA-GATAGAGGGACCCTGA-AGGCGGTGGGGCCTGCTTTCCACACGGG-----------------------GCCTTTGGAAATGACA--GGAACAGTGGT-CCCCAGGCACCCTGGCC-ACTCCCTCAGCTAAGCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1483109 346 + 3644372 GGAGGGCAGGGGTGCGG------CAGTGTGTCTGGCGATG----------------CCTGCTTAGATGAGAGCTGGG-TCATGCACAGTGCACCA----GAGAGG---C----AGGGGCTGGCCCGGCCCTCAGCAGGT-ACCTGGCATTTGAAGACACCCAGGTCATCCCACACAGGACGATGCACGTCGTGATTCCTAAGTC-TTCCTTT-TGGGCATCCTAAGGCCAAA------C-TTTAAAGA--CTGGTGGCATGCAGTGGTGGGTTCACACGCCACTGA-GATAGAGGGACCCTGA-AGGCGGTGGGGCCTGCTTTCCACACGGG-----------------------GCCTTTGGAAATGACA--GGAACAGTGGT-CCCCAGGCACCCTGGCC-ACTCCCTCAGCTAAGCTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1437680 346 - 10304083 GGAGGGCAGGGGTGTGG------CAGTGTGTCTGGCGATA----------------CCTGCTTAGATGAGAGCTGAG-TCATGCACAGTGCACCA----GAGAGG---C----AGGGGCTGGCCCGGCCCTCAGCAGGT-GCCTGGCATTTGAAGACACCCAGGTCATCCCACACAGGACGATGCACGTCGTGATTCCTAAGTC-TTCCTTT-TGGGCATCCTAAGGCCAAA------C-TTTAAAGA--CTGGTGGCATGCAGTGGTGGGTTCACACGCCACTGA-GATAGAGGGACCCTGACAGGCGGTGGGGCCTGCTTTCCACACGGG-----------------------GCCTTTGGAAATGACA--GGAACAGTGGT--CCCAGGCACTCTGGCC-ACTCCCTCAGCTAAGCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1515331 347 - 107702431 GGAGGGCAGGGGTGCGG------CAGTGTGTCTGGCGATA----------------CCTGCTTAGATGAGAGCTGAG-TCATGCACAGTGCACCA----GAGAGG---C----AGGGGCTGGCCCGGCCCTCAGCAGGT-GCCTGGCATTTGAAGACACCCAGGTCATCCCACACAGGACGATGCACATCGTGATTCCTAAGTC-TTCCTTT-TGGGCATCCTAAGGCCAAA------C-TTTAAAGA--CTGGTGGCATGCAGTGCTGGGTTCCCACGCCACTGA-GATAGAGGGACCCTGACAGGCGGTGGGGCCTGCTTTCCACGCGGG-----------------------GCCTTTGGAAATGACA--GGAACAGTGGT-CCCCAGGCACCCTGGCC-ACTCCCTCAGCTAAGCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1003158 347 - 2200435 GGAGGGCAGGGGTGTGG------CAGTGTGTCTGGCGATA----------------CCTGCTTAGATGAGAGCTGAG-TCATGCACAGTGCACCA----GAGAGG---C----AGGGGCTGGCCCGGCCCTCAGCAGGT-GCCTGGCATTTGAAGACACCCAGGTCATCCCACACAGGACGATGCACGTTGTGATTCCTAGGTC-TTCCTTT-TGGGCATCCTAAGGCCAAA------C-TTTAAAGA--CTGGTGGCATGCAGTGGTGGGTTCACACGCCACTGA-GATAGAGGGACCCTGACAGGCGGTGAGGCCTGCTTTCCACACGGG-----------------------GCCTTTGGAAATGACA--GGAACAGTGGT-CCCCAGGCACCCTGGCC-ACTCCCTCAGCTAAGCTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1440474 346 - 13651311 GGAGGGCAGGGGTGTGG------CAGTGTGTCTGGCGATA----------------CCTGCTGAGATGAGAGCTGAG-TCGTGCACAGCACACCA----GAGAGG---C----AGGGGCTGGCCCGGCCCTCAGCA-GT-GCCTGGCATTTGAAGACACCCAGGTCATCCCACACAGGACAATGCACGTCGTGATTCCTAAGTC-TTCCTTT-TGGCCATCCTAAGGCCAAA------C-TTTAAAGA--CTGGTGCCATGCAGTGGTGGGTTCACACGCCATTGA-GACAGAGGGACCCTGACAGGCGGTGGGGCCTGCTTTCCACACAGG-----------------------GCCTTTGGAAATGACA--GGAACAGTGGT-CCCCAGGCACCCTGGCC-ACTCCCTCAGCTAAGCTG i colAng1.NW_012118821v1 M 5693 C 0 s calJac3.chr14 1430675 352 - 108792865 GGGAGGGTGAGGTGCTG------CAGTGTGTCCAGCAGTA----------------CCTGCTTAGATGAGAGCTGAA-CCAGGCACAGCGTGTCA----GAGAGG---T------GGGCACGCCTGGCCCTCCGCAGCT-GCCTGGCCTCTGATGACACCCAGGTCA-CCCACCCAGGATGACACGCATCATGTTTTCTGAGTTGTGCCTTT-GGGGCACCCTGAGGCCACACTGACTC-TTTAAAGACTCTGATGTCATGCAGTTGTGGGTTCACACGCCTTTGA-GGTGGAGGGTCCCTGACGGGCGGTGGGGTCTG-TTTCCATATGGG-----------------------GCCTTTGGAGATGACG--GGAACAGTGGT-CCCCAGGCAGCCTGGCC-ACTCCCTCAGCTAAGCCG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1259612 357 - 7082604 GGGAGGGCAGAGGTCTGCAGTGTCAGTGTGTCCAGCAGTA----------------CCTGCTTAGATGACAGCTGAG-CCAGGCACAGCATGTCA----GAGAGG---C------GGGCACACCTGGCCCTCTGCAGCT-GCCTGGCCTCTGATGACACCCACGTCA-CCCACAAAGGATGACGCACATCATGTTTTCTGAGTCGTGCTTTT-GGGACACCCTGAGGCCACACTGATCC-TTTAAAGACTCTGATGTCATGCAGTTGTGGGTTCACACGTCTCTGA-GATGCAGGGTCCCTGACAGGCGGTAGGCTCCG-TTTCCATATGGG-----------------------GCCTTTGGAGATGCTG--GGAACACTGGG--CCCAGGCACCCTGGCC-ACTCCCTCAGCTAAGCTG i saiBol1.JH378218 C 0 I 3 s cebCap1.NW_016107827v1 1353308 352 + 1864846 GGAGGGCAGAGGTGCAG------CAGTGTGTCCAGCAGTA----------------CCTGCTTAGATGACAGCTGAG-CCAGGCACAGCGTGTCA----GAGAGC---G------GGGCACGCCTGGCCCTCCGCAGCT-GCCTGGCCTCTGATGACACCCAGGTCA-CCCACACAGGATGACGCACATCATGTTTTCTGAGTCATGCCTTT-GGGGCACCCTGAGGTCACACTGACCC-TTTAAAGACTCTTACGTCATGCAGTTGTGGGTTCACACGCCTTTGA-GATGGAGGGTCCCTGACTGGCGGTGGGGTCCG-TTTCCATATGGG-----------------------GCCTTTGGAGATGACG--GGAACAGTGGT-CCCCAGGCACCCTGGCC-ACTCCCTCAGCTAAGCCG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 172443 353 + 287728 GGAGGGCAGAGGAGCTG------CAGTGTGTCCAGCAGTA----------------CCTGCTTAGATGAGAGCTGAG-CCAGGCACAGCGTGTCA----GAGAGG---C-----GGGGCACGCCTGGCCCTCCAAAGCT-GCCTGGTCTCCGATGACACCCAGGTCA-CCCACAAAGGATGATGTGCATCACGTTTTCTGAGTCGTGCCTTT-GGGCCACCCTGAGGCCACACTGATCC-TTTAAAGACTCTGATGTCATGCAGTTGTGGGTTCACACGCCTTTGA-GATGGAGGGTCCCTGATGGGCAGTGGGGCCTG-TTTCCATGTGGG-----------------------GCCTTTGGAGATGACG--GGAACAGGGGT-CCGCAGGCACCCTGGCC-ACTCCCTCAGCTAAGCCG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 951711 278 + 5252280 --GGGACAGTGGCTCTG------TGAC-----------------------------CCCCTCTAAATGGGTGCTTTG---ATACAGAACTCATCA----GGGAGAGGTC----AGAGCTCAGCCTGGCC-----------------------------TCCAGGC---CCCACACACCATG---------------TCCAGGTCATGATTTG-GGGGTACCCTGAGGCCAGACTGATCC-----------CATATTGCTCTTAACTGTGAGCTCACGATCCATC-A-GGGGCATGGACGCTGAGAGATGCTAA--TCTATCTTCCATGAGGG-----------------------G-CTTTGGTGGTGGTGGTGGAGCGGGGGT-CCTCAGGCACCATGACCTACT-------GTGACCTG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1777855 403 + 4416731 --AAAGTGGAGTT--TA------CGAAGTCACTGCCAATATACTCTTGCTTCTCTCTCCATTTAAATAA--GCTGTTTTCATGTAAAACTTACTAGAATGAGAGG---TTAAGGGGAACAGTTGGGGCCTTTACCAGGTAACCTGAAGTCTGATGACAAGTAAGTCACCCTGCCTGGGCCAAAGGAAATTGTGATTTCAAAGTTGTTCTTTTGGGGGCACCCTAGGGTCCACATGATCCAATAAAAGACTTTTATTCTAAGGAATTGAAGATTCAAATGCTCTTGGTGTCATAAGGATCCTTAGAGGCAATCTATTTAGTTTTTCAAGAAGGAGTTCCATGGAGATGACACTAGAGCTTTGGGAGATGATG--AAAACAGAGGGGTTCTAGACACTCTGACT-CCTCCTTTGGTCAAACCA i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90028706 1678 - 120129022 I a score=756875.000000 s hg38.chr2_KI270774v1_alt 169533 80 + 223625 AGTCTTC-CTTTCACTGTTCTGGATGTTAGAATTCAGCAAACGCTTC-TT---------------------------------------------------TTTTTT---GTAATCTTTCTGTTGCTGAGAAATAA s panTro5.chr2A 1466637 81 + 111504155 AGTCTTC-CTTTCACTGTTCTGGATGTTAGAATTCAGCAAACGCTTC-TT---------------------------------------------------TTTTTT--TGTAATCTTTCTGTTGCTGAGAAATAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1404890 80 + 114371477 AGTCTTC-CTTTCACTGTTCTGGATGTTAGAATTCAGCAAACGCTTC-TT---------------------------------------------------TTTTTT---GTAATCTTTCTGTTGCTGAGAAATAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1429285 82 + 1464242 AGTCTTC-CTTTCACTGTTCTGGATGTTAGAATTCAGCAAACACTTC-TT---------------------------------------------------TTTTTT-TTGTAATATTTGTGTTGCTGAGAAATAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1153227 83 + 81552678 AGTCTTC-CTTTCACTGTTCTGGATGTTAGAATTCAGCAAACGCTTC-TT---------------------------------------------------TTTTTTTTTGTAATCTTTCTGTTGCTGAGAAATAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1482907 80 + 108979918 AGTCTTC-CTTTCACTGTTCTGGATGTTAGAATTCAGCAAATGCTTC-TT---------------------------------------------------TTTTTG---GTAATCTTTCTGTTGCTAAGAAACAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1455348 80 - 111193037 AGTCTTC-CTTTCACTGTTCTGGATGTTAGAATTCAGCAAATGCTTC-TT---------------------------------------------------TTTTTT---GTAATCTTTCTGTTGCTAAGAAACAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1483455 80 + 3644372 AGTCTTC-CTTTCACTGTTCTGGATGTTAGAATTCAGCAAATGCTTC-TT---------------------------------------------------TTTTTT---GTAATCTTTCTGTTGCTAAGAAACAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1438026 75 - 10304083 AGTCTTC-CTTTCACTGTTCTGGATATTAGAATTCAGCAAATGCTTC-TT---------------------------------------------------TGTTTT---GTAATCTTTCTGTTGATAAG-----A i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1515678 76 - 107702431 AGTCTTC-CTTTCACTGTTCTGGATGTTAGAATTCAGCAAATGCTTCTTT---------------------------------------------------TTTTTT---GTAATCTTTCTGTTGATAAG-----A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1003505 80 - 2200435 AGTCTTC-CTTTCACTGTTCTGGATGTTAGAATTCAGCAAATGCTTC-TT---------------------------------------------------TTTTTT---GTAATCTTTCTGTTGCTAAGAAACAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1440820 75 - 13651311 AGTCTTC-CTTTCTCTGTTCTGGATGTTAGAATTCAGCAAACGCTTC-TC---------------------------------------------------TTTTTT---GTAATCTTTCTGTTGCTAAG-----A i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1431027 82 - 108792865 TGCCTTC-CTTTCACTGTTCTGGATGTTAGAATTCAGCAAATGCTTC-TC---------------------------------------------------TTTCTT-TGGTAATCTTTCTGTTGCTGAGAAATAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1259972 122 - 7082604 CTTCTTC-CTTTCACTGTTCTGGATGTTAGAATTCAGCAAATGCttt-tt-----------tttttttgtttttttttttgtttgtttttttgtttttttgtttttt-tgttAATCTTTCCATTGCTGAGAAATAA i saiBol1.JH378218 I 3 C 0 s cebCap1.NW_016107827v1 1353660 133 + 1864846 AGTCTTC-CTTTCACTGTTCTGGATGTTAGAATTCTGCAAATGCTTC-ttttttttttttttttttttttttttttttttttttttttttttttttttttttttttt-tGGTAATCGTTCCATTGCCGAGAAATAA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 172796 82 + 287728 AGTCTTC-CTTTCACTGTCCCGGATGTTAGAATTCAGCAAATGCTTC-TC---------------------------------------------------TTTTTT-TGGTAATCTTTCCGTTGCTGAGAAATAA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 951989 61 + 5252280 AGT--------------TCCTACATAGTAGATGTCAGTGAACACATC-CT---------------------------------------------------CCTAGT---GTAATGTTTCTGCTGCAGG------C i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90030384 80 - 120129022 AGGCCAC-ATCTTACTGCTCCAGGCAGTGGAGGCCAGTGAGTATTTC-CT---------------------------------------------------CTGACT---CTAAACATTCTGCTGCTGAGAAGTGA i mm10.chr12 I 1678 I 139 s dasNov3.JH576208 1778258 81 + 4416731 AGTCTTCTTTTTTACTCTTCTGTACATTAGAATTCAGCAAATGTTTC-CT---------------------------------------------------TCAATC---ATCACACTTCTGCTGCTGAAAAATCA i dasNov3.JH576208 C 0 C 0 a score=1905622.000000 s hg38.chr2_KI270774v1_alt 169613 185 + 223625 ----AACAAAAAGCTTTAAAAACTGGTGGGC-------TCCTTCTCCAGGCCCCTTTCT--TTCTGAGGGTCCATCCCCC-----------ATGAGCCACATTGTCAGTGCCAGCCCAGTGGTTCACCTGCCAACAAGGGCAGTGTCCTGAGGACATTCAGGAAACTCTGGAATCACACAAGCTGAATTCATGAACTTACACGAAGGTT s panTro5.chr2A 1466718 185 + 111504155 ----AACAAAAAGCTTTAAAAACGGGTGGGC-------TCCTTCTCCAGGCCCCTTTCT--TTCTGAGGGTCCATCCCCC-----------ATGAGCCACATTGTCAGTGCCAGCCCAGTGGTTCACCCGCCAACAAGGGCAGTGTCCTGAGGACATTCAGGAAACTCTGGAATCACACAAGCTGATTTCATGAACTTACACGAAGGTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1404970 185 + 114371477 ----AACAAAAAGCTTTAAAAACGGGTGGGC-------TCCTTCTCCAGGCCCCTTTCT--TTCTGAGGGTCCATCCCCC-----------ATGAGCCACATTGTCAGTGCCAGCCCAGTGGTTCACCCGCCAACAAGGGCAGTGTCCTGAGGACATTCAGGAAACTCTGGAATCACACAAGCTGCATTCATGAACTTACACGAAGGTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1429367 185 + 1464242 ----AACAAAAAGCTTTAAAAACTGGTGGGC-------TCCTTCTCCAGGCCCCTTTCT--TTCTGAGGGTCCATCCCCC-----------ATGAGCCACATTGTCAGTGCCAGCCCAGTGGTTCACCCGCCAACAAGGGCAGTGTCCTGAGGACATTCAGGAAACTCTGGAATCACACAAGCTGAATTCATGAACTTACACGAAGGTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1153310 181 + 81552678 ----AACAAAAAGCTTTAAAAACTGGTGGGC-------TCCTTCTCCAGACCC----CT--TTCTGAGGGTCCATCCCCC-----------ATGAGCCTCATCATCAGTGCCAGCCCAGTGGTTCACCCGCCAGCAAGGGCAGTGTCCTGAGGACATTCAGGAGACTCTGGAATCACACAAGCTGAATTCATGAACTTACACGAAGATT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1482987 184 + 108979918 ----AACAAAAAGCTTTAAAAACTGGTGGAC-------TCCTTCTCCAGGCCCCTTTCT--TTCTGAGGGTCCATCCCTC-----------ATGAGCCATATCATCAGTGCCAGCCCAGTGGTTCACCCGCCAGCAA-GGCAGTGTCCTGAGGACATTCAGGAAACTCTGGAATCACACAAGCGGAATTCATGAACTTACGCAAAGATT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1455428 184 - 111193037 ----AACAAAAAGCTTTAAAAACTGGTGGAC-------TCCTTCTCCAGGCCCCTTTCT--TTCTGAGGGTCCATCCCTC-----------ATGAGCCACATCATCAGTGCCAGCCCAGTGGTTCACCCGCCAGCAA-GGCAGTGTCCTGAGGACATTCAGGAAACTCTGGAATCACACAAGCGGAATTCATGAACTTACACAAAGATT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1483535 184 + 3644372 ----AACAAAAAGCTTTAAAAACTGGTGGAC-------TCCTTCTCCAGGCCCCTTTCT--TTCTGAGGGTCCATCCCTC-----------ATGAGCCACATCATCAGTGCCAGCCCAGTGGTTCACCCGCCAGCAA-GGCAGTGTCCTGAGGACATTCAGGAAACTCTGGAATCACACAAGCAGAATTCATGAACTTACACAAAGATT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1438101 185 - 10304083 ----AATAAAAAGCTTTAAAAACTGGTGGAC-------TCCTTCTCCAGGCCCCTTTCT--TTCTGAGGGTCCATCCCCC-----------ATGAGCCACATCGTCAGTGCCAGCCCAGTGGTTCACCCGCCGGCAAGGGCAGTGTCCTGAGGACATTCAGGAAACTCTGGAATCACACAAGCGGAATTCATGAACTTACACACAGATT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1515754 185 - 107702431 ----AATAAAAAGCTTTAAAAGCTGGTGGAC-------TCCTTCTCCAGGCCCCTTTCT--TTCTGAGGGTCCGTCCCCC-----------ATGAGCCACATCGTCAGTGCCAGCCCAGTGGTTCACCCGCCAGCGAGGGCAGTGTCCTGAGGACATTCAGGACACTCTGGAATCACACAAGCGGAATTCATGAACTTACACAAAGATT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1003585 185 - 2200435 ----AACAAAAAGCTTTAAAAACTGGTGGAC-------TCCTTCTCCAGGCCCCTTTCT--TTCTGAGGGTCCATCCCCC-----------ATGAGCCACATCGTCAGTGCCAGCCCAGTGGTTCACCCGCCGGCAAGGGCAGTGTCCTGAGGACATTCAGGAAACTCTGGGATCACACAAGCGGAATTCATGAACTTACACACAGATT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1440895 185 - 13651311 ----AATAAAAAGCTTTAAAAACTGGTGGAC-------TCCTTCTCCAGGCCCCTTCCT--TTCTGCAGGTCCATCCCCC-----------ATGAGCCACATCATCAGTGCCAGCCCAGTGGTTCACCCGCCAGCAAGGGCAGTGTCCTGAGGACATTCAGGAAACTCTGGAATCACACAAGCGGAATTCATGAACTTACACAAAGATT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1431109 169 - 108792865 ----AACAAAAAGCTTTAAAAACTGGCA-GC-------TCCTCCTCCAGACCTCTTTCC--TTCTGAGGGTCCATCCCCC-----------ATGAGCCACATTGTCAGTGTCAGC---------------CCAGCAAGGGCAGCGTCCTGAGGACATTCAGGAAAGTCTGGAGTCACACAAGCTGAGTTCATGAACTTACAGGAAGATT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1260094 185 - 7082604 ----AACAAAAATCTTTAAAAAGTGGCAGGC-------TCCTTCGCCAGGCCCCTTTCT--TTCTGGGGGTCCATCCCCC-----------ATGAGCCACGTCGTCAGCGTCAGCCCGGTGCTTTACCTGCCAGCAAGGGTAGCATCCCGAGGACATTCAGGAAACTCTGGAGTCACACAAGCTGAGCTCATAAACCTACACGAAGATT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1353793 191 + 1864846 ----AACAAAAAGCTTTAAAAACTGGCA-GCCTCCTTGTCCTTGTCCAGGCCCCTTTCT--TTCTGAGGGTCCATCCCCC-----------ATGAGCCACGTCGTCAGTGTCGGCCCAGTGCTTCACCTGCCAGCAAGGGCAGCGTCCTGAGGACATTCAGGAAACTCTGGAGTCACACAAGCTGAGTTCATAAACGTACGCGAAGATT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 172878 185 + 287728 ----AACAAAAAGCTTTAAAAACCAGCAGGC-------TCCTTCTCCAGGCCCCTTTCT--TTCTGAGGGTTCATCCCCC-----------ATGAGCCACGTCGTCAGTGTCAGCCCAGTGGTTCACCTGCCAGCAAGGGCAGCGTCCTGAGGACATTCAGAAAACTCTGGAGTCACACAAGCTGAGTTCATGAACTTACACGAAGATT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 952050 163 + 5252280 ----GACACAGCCCTCAAGTAACTCACAGGC---------CTGCTCCAGGCCT-------------GGGTTCAGGCCCCC-----------ATAAGCCACACAGACGGTGCC--TCATGGCACTAAGCCACCAACATGGGTAGTGTCCCAGGGATACTCAGGAAACTTTGGAATTGTACAGGGTGAATTCAT-------CACCTGTGTT i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1778339 197 + 4416731 AACAAACAAAAAATC----AATTTTCTAGAC-------TCATTTtctaagatccttttcagttctaaagatctgtcattctatTCATTTCATTGATGTGCAGAATGGATATCAGA-CAGATGTTAATCTACCAACAAGGATAGGATTATAAAAATATTCTGAAAACTTGGGGATCATGTAAGGTGAATTCATGAACTTATTAAAAGGTT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90030464 139 - 120129022 I a score=78339.000000 s hg38.chr2_KI270774v1_alt 169798 7 + 223625 TGCTGAG s panTro5.chr2A 1466903 7 + 111504155 TGCTGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1405155 7 + 114371477 TGCTGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1429552 7 + 1464242 TGCTGAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1153491 7 + 81552678 TGCTAAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1483171 7 + 108979918 TGCTAAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1455612 7 - 111193037 TGCTAAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1483719 7 + 3644372 TGCTAAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1438286 7 - 10304083 TGCTAAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1515939 7 - 107702431 TGCTAAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1003770 7 - 2200435 TGCTAAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1441080 7 - 13651311 TGCTAAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1431278 7 - 108792865 TGCTAAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1260279 7 - 7082604 TGCTGAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1353984 7 + 1864846 TGCTGAG i cebCap1.NW_016107827v1 C 0 I 16 s aotNan1.NW_018513311v1 173063 7 + 287728 TGCTAAG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 952213 7 + 5252280 TGTCAAG i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90030464 139 - 120129022 I e dasNov3.JH576208 1778536 0 + 4416731 C a score=35433.000000 s hg38.chr2_KI270774v1_alt 169805 4 + 223625 GATA s panTro5.chr2A 1466910 4 + 111504155 GATA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1405162 4 + 114371477 GATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1429559 4 + 1464242 GATA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1153498 4 + 81552678 GATA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1483178 4 + 108979918 GACA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1455619 4 - 111193037 GACA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1483726 4 + 3644372 GACA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1438293 4 - 10304083 GACA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1515946 4 - 107702431 GACA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1003777 4 - 2200435 GACA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1441087 4 - 13651311 GACA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1431285 4 - 108792865 GATA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1260286 4 - 7082604 GATA i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 173070 4 + 287728 GATA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 952220 4 + 5252280 GGTA i otoGar3.GL873658 C 0 I 24 e mm10.chr12 90030464 139 - 120129022 I e cebCap1.NW_016107827v1 1353991 16 + 1864846 I e dasNov3.JH576208 1778536 0 + 4416731 C a score=20055.000000 s hg38.chr2_KI270774v1_alt 169809 2 + 223625 AG s panTro5.chr2A 1466914 2 + 111504155 AG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1405166 2 + 114371477 AG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1429563 2 + 1464242 AG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1153502 2 + 81552678 AG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1483182 2 + 108979918 AG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1455623 2 - 111193037 AG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1483730 2 + 3644372 AG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1438297 2 - 10304083 AG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1515950 2 - 107702431 AG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1003781 2 - 2200435 AG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1441091 2 - 13651311 AG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1431289 2 - 108792865 AG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1260290 2 - 7082604 AG i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 173074 2 + 287728 AG i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90030464 139 - 120129022 I e cebCap1.NW_016107827v1 1353991 16 + 1864846 I e otoGar3.GL873658 952224 24 + 5252280 I e dasNov3.JH576208 1778536 0 + 4416731 C a score=3641.000000 s hg38.chr2_KI270774v1_alt 169811 2 + 223625 AT s panTro5.chr2A 1466916 2 + 111504155 AT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1405168 2 + 114371477 AT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1429565 2 + 1464242 AT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1153504 2 + 81552678 AT i nomLeu3.chr19 C 0 C 0 s chlSab2.chr14 1515952 2 - 107702431 AC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1441093 2 - 13651311 AT i colAng1.NW_012118821v1 C 0 C 0 s aotNan1.NW_018513311v1 173076 2 + 287728 AC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90030464 139 - 120129022 I e saiBol1.JH378218 1260292 0 - 7082604 C e cebCap1.NW_016107827v1 1353991 16 + 1864846 I e otoGar3.GL873658 952224 24 + 5252280 I e dasNov3.JH576208 1778536 0 + 4416731 C e calJac3.chr14 1431291 0 - 108792865 C e manLeu1.NW_012103754v1 1003783 0 - 2200435 C e cerAty1.NW_012000820v1 1438299 0 - 10304083 C e macNem1.NW_012011978v1 1483732 0 + 3644372 C e macFas5.chr13 1455625 0 - 111193037 C e rheMac8.chr13 1483184 0 + 108979918 C a score=11349.000000 s hg38.chr2_KI270774v1_alt 169813 7 + 223625 TGAGCTA s panTro5.chr2A 1466918 7 + 111504155 TGAGCTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1405170 7 + 114371477 TGAGCTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1429567 7 + 1464242 TGAGCTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1153506 7 + 81552678 TGAGATA i nomLeu3.chr19 C 0 C 0 s colAng1.NW_012118821v1 1441095 7 - 13651311 TGAGATA i colAng1.NW_012118821v1 C 0 C 0 s aotNan1.NW_018513311v1 173078 7 + 287728 TGAGATA i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90030464 139 - 120129022 I e saiBol1.JH378218 1260292 0 - 7082604 C e cebCap1.NW_016107827v1 1353991 16 + 1864846 I e otoGar3.GL873658 952224 24 + 5252280 I e dasNov3.JH576208 1778536 0 + 4416731 C e calJac3.chr14 1431291 0 - 108792865 C e manLeu1.NW_012103754v1 1003783 0 - 2200435 C e chlSab2.chr14 1515954 0 - 107702431 C e cerAty1.NW_012000820v1 1438299 0 - 10304083 C e macNem1.NW_012011978v1 1483732 0 + 3644372 C e macFas5.chr13 1455625 0 - 111193037 C e rheMac8.chr13 1483184 0 + 108979918 C a score=4230.000000 s hg38.chr2_KI270774v1_alt 169820 3 + 223625 TTG s panTro5.chr2A 1466925 3 + 111504155 TTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1405177 3 + 114371477 TTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1429574 3 + 1464242 TTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1153513 3 + 81552678 TTG i nomLeu3.chr19 C 0 C 0 s colAng1.NW_012118821v1 1441102 3 - 13651311 TTG i colAng1.NW_012118821v1 C 0 I 14 e aotNan1.NW_018513311v1 173085 0 + 287728 C e mm10.chr12 90030464 139 - 120129022 I e saiBol1.JH378218 1260292 0 - 7082604 C e cebCap1.NW_016107827v1 1353991 16 + 1864846 I e otoGar3.GL873658 952224 24 + 5252280 I e dasNov3.JH576208 1778536 0 + 4416731 C e calJac3.chr14 1431291 0 - 108792865 C e manLeu1.NW_012103754v1 1003783 0 - 2200435 C e chlSab2.chr14 1515954 0 - 107702431 C e cerAty1.NW_012000820v1 1438299 0 - 10304083 C e macNem1.NW_012011978v1 1483732 0 + 3644372 C e macFas5.chr13 1455625 0 - 111193037 C e rheMac8.chr13 1483184 0 + 108979918 C a score=95621.000000 s hg38.chr2_KI270774v1_alt 169823 111 + 223625 ggctgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggcagatcaccaggtcaggagattgagaccatcctggctaacacggtgaaaccccat s panTro5.chr2A 1466928 111 + 111504155 ggctgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggcggatcaccaggtcaggagactgagaccatcctggctaacacggtgaaaccccat i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1405180 111 + 114371477 ggctgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggcggatcaccaggtcaggagattgagaccatcctggctaacacggtgaaaccccat i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1429577 111 + 1464242 ggctgggcgcagtggctcatgcctgtaatcccagcactgtgggaggccgagacaggcggatcaccaggtcaggagattgagaccatcccagctaacacggtgaaaccccat i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1153516 110 + 81552678 ggccgggcgcag-ggctcacgtctgtaatcctagcactttgagaggccaaggcagggggatcaccaggtcaggagattgagaccatcctggctaacatggtgaaaccccag i nomLeu3.chr19 C 0 C 0 e aotNan1.NW_018513311v1 173085 0 + 287728 C e mm10.chr12 90030464 139 - 120129022 I e saiBol1.JH378218 1260292 0 - 7082604 C e cebCap1.NW_016107827v1 1353991 16 + 1864846 I e otoGar3.GL873658 952224 24 + 5252280 I e dasNov3.JH576208 1778536 0 + 4416731 C e calJac3.chr14 1431291 0 - 108792865 C e colAng1.NW_012118821v1 1441105 14 - 13651311 I e manLeu1.NW_012103754v1 1003783 0 - 2200435 C e chlSab2.chr14 1515954 0 - 107702431 C e cerAty1.NW_012000820v1 1438299 0 - 10304083 C e macNem1.NW_012011978v1 1483732 0 + 3644372 C e macFas5.chr13 1455625 0 - 111193037 C e rheMac8.chr13 1483184 0 + 108979918 C a score=146921.000000 s hg38.chr2_KI270774v1_alt 169934 187 + 223625 ctctactaaaaatgcaaaaagaaattagccaagcatggtagcgggcgcctgtagtcccaattactcgggaggctgaggcaggagcatggcgtgaacccgggaggcagagcttgcagtgagctgagatcgccactgcactccagcctgggcaacagaaagaatgagactccgtctcaaaaaaaaaaaa s panTro5.chr2A 1467039 187 + 111504155 ctctactaaaaatgcaaaaagaaattagccaagcatggtagcgggcgcctgtagtcccaattactcgggaggctgaggcaggagaatggcgtgaacccgggaggcagagcttgcagtgagctgagatcgccactgcactccagcctgggcaacagaaagaacgagactccgtctcaaaaaaaaaaaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1405291 186 + 114371477 ctctactaaaaatgcaaaaagaaattagccaagcatggtagcgggcgcctgtagtcccaattactcgggaggctgaggcaggagaatggcgtgaacccgggaggcagagcttgcagtgagctgagatcgccactgcactccagcctgggcaacagaaagaacgagactccgtctcaaaaaaaaaaa- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1429688 187 + 1464242 ctctactaaaaatgcaaaaagaaattagccaagcatggtagcgggcgcctgtagtcccaattactcgggaggctgaggcaggagaatggcgtgaacccgggaggcagagcttgcagtgagctgagatcgccactgcactccagcctgggcaacagaaagaacgagactccatctcaaaaaaaaaaaa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1153626 187 + 81552678 ctctactaaaaatacaaaaagaaattagccaagtgtggtagcgggcacctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagctgagatcaccactgtgctccagcctgggcgacagaaagagcgagactccatcttaaaaaaaaaaaa i nomLeu3.chr19 C 0 C 0 s dasNov3.JH576208 1778536 34 + 4416731 ATTTGCTAAAG--------------------------------------------------------------------------------------CAAGAAGCATAGTTTGTGATAGG------------------------------------------------------------------- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 173085 0 + 287728 C e mm10.chr12 90030464 139 - 120129022 I e saiBol1.JH378218 1260292 0 - 7082604 C e cebCap1.NW_016107827v1 1353991 16 + 1864846 I e otoGar3.GL873658 952224 24 + 5252280 I e calJac3.chr14 1431291 0 - 108792865 C e colAng1.NW_012118821v1 1441105 14 - 13651311 I e manLeu1.NW_012103754v1 1003783 0 - 2200435 C e chlSab2.chr14 1515954 0 - 107702431 C e cerAty1.NW_012000820v1 1438299 0 - 10304083 C e macNem1.NW_012011978v1 1483732 0 + 3644372 C e macFas5.chr13 1455625 0 - 111193037 C e rheMac8.chr13 1483184 0 + 108979918 C a score=-96.000000 s hg38.chr2_KI270774v1_alt 170121 1 + 223625 a s gorGor5.CYUI01015607v1 1429875 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1153813 1 + 81552678 a i nomLeu3.chr19 C 0 I 3 s mm10.chr12 90030603 1 - 120129022 A i mm10.chr12 I 139 C 0 e aotNan1.NW_018513311v1 173085 0 + 287728 C e saiBol1.JH378218 1260292 0 - 7082604 C e cebCap1.NW_016107827v1 1353991 16 + 1864846 I e otoGar3.GL873658 952224 24 + 5252280 I e dasNov3.JH576208 1778570 0 + 4416731 C e calJac3.chr14 1431291 0 - 108792865 C e colAng1.NW_012118821v1 1441105 14 - 13651311 I e manLeu1.NW_012103754v1 1003783 0 - 2200435 C e chlSab2.chr14 1515954 0 - 107702431 C e cerAty1.NW_012000820v1 1438299 0 - 10304083 C e macNem1.NW_012011978v1 1483732 0 + 3644372 C e macFas5.chr13 1455625 0 - 111193037 C e rheMac8.chr13 1483184 0 + 108979918 C e panPan2.chr2A 1405477 0 + 114371477 C e panTro5.chr2A 1467226 0 + 111504155 C a score=5655.000000 s hg38.chr2_KI270774v1_alt 170122 2 + 223625 aT s nomLeu3.chr19 1153817 2 + 81552678 AT i nomLeu3.chr19 I 3 C 0 s rheMac8.chr13 1483184 2 + 108979918 AT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1455625 2 - 111193037 AT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1483732 2 + 3644372 AT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1438299 2 - 10304083 AT i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 1003783 2 - 2200435 AT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1431291 2 - 108792865 AC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1260292 2 - 7082604 AC i saiBol1.JH378218 C 0 C 0 s mm10.chr12 90030604 2 - 120129022 AC i mm10.chr12 C 0 C 0 e aotNan1.NW_018513311v1 173085 0 + 287728 C e cebCap1.NW_016107827v1 1353991 16 + 1864846 I e otoGar3.GL873658 952224 24 + 5252280 I e dasNov3.JH576208 1778570 0 + 4416731 C e colAng1.NW_012118821v1 1441105 14 - 13651311 I e chlSab2.chr14 1515954 0 - 107702431 C e gorGor5.CYUI01015607v1 1429876 0 + 1464242 C e panPan2.chr2A 1405477 0 + 114371477 C e panTro5.chr2A 1467226 0 + 111504155 C a score=57850.000000 s hg38.chr2_KI270774v1_alt 170124 10 + 223625 TGAGATATTG s panTro5.chr2A 1467226 10 + 111504155 TGAGATATTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1405477 10 + 114371477 TGAGATATTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1429876 10 + 1464242 TGAGATATTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1153819 10 + 81552678 TGAGATATTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1483186 10 + 108979918 TGAAATATTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1455627 10 - 111193037 TGAAATATTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1483734 10 + 3644372 TGAAATATTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1438301 10 - 10304083 TGAGATATTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1515954 10 - 107702431 TGAGATATTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1003785 10 - 2200435 TGAGATATTG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1431293 7 - 108792865 TGAGATA--- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1260294 7 - 7082604 TGAGATA--- i saiBol1.JH378218 C 0 C 0 s mm10.chr12 90030606 10 - 120129022 TGAGAATCTA i mm10.chr12 C 0 I 3 s dasNov3.JH576208 1778570 8 + 4416731 --AGATGTTA i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 173085 0 + 287728 C e cebCap1.NW_016107827v1 1353991 16 + 1864846 I e otoGar3.GL873658 952224 24 + 5252280 I e colAng1.NW_012118821v1 1441105 14 - 13651311 I a score=10920.000000 s hg38.chr2_KI270774v1_alt 170134 1 + 223625 T s panTro5.chr2A 1467236 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1405487 1 + 114371477 T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1429886 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1153829 1 + 81552678 T i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1483196 1 + 108979918 T i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1455637 1 - 111193037 T i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1483744 1 + 3644372 T i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1438311 1 - 10304083 T i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1515964 1 - 107702431 T i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1003795 1 - 2200435 T i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1431300 1 - 108792865 T i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1260301 1 - 7082604 T i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 173085 1 + 287728 T i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90030619 1 - 120129022 T i mm10.chr12 I 3 C 0 s dasNov3.JH576208 1778578 1 + 4416731 T i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1353991 16 + 1864846 I e otoGar3.GL873658 952224 24 + 5252280 I e colAng1.NW_012118821v1 1441105 14 - 13651311 I a score=290261.000000 s hg38.chr2_KI270774v1_alt 170135 30 + 223625 --TGTTTCTCTAGAACTGAGCCAAGAGCTG------TC s panTro5.chr2A 1467237 30 + 111504155 --TGTTTCTCTAGAACTGAGCCAAGAACTG------TC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1405488 30 + 114371477 --TGTTTCTCTAGAACTGAGCCAAGAACTG------TC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1429887 30 + 1464242 --TGTTTCTCTAGAACTGAGCCAAGAACTG------TC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1153830 30 + 81552678 --TGTTTCTCTAGAACTGAGCCGAGAACTG------TC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1483197 30 + 108979918 --TGTTTCTCTAGAACTGAGCCGAGAACTG------TC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1455638 30 - 111193037 --TGTTTCTCTAGAACTGAGCCGAGAACTG------TC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1483745 30 + 3644372 --TGTTTCTCTAGAACTGAGCCGAGAACTG------TC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1438312 30 - 10304083 --TGTTTCTCTAGAACTGAGCCAAGAACTG------TC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1515965 30 - 107702431 --TGTTTCTCTAGAACTGAGCTGAGAACTG------TC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1003796 30 - 2200435 --TGTTTCTCTAGAACTGAGCCGAGAACTG------TC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1431301 30 - 108792865 --TGTTTCTCTAGAACGGAGCCAAGAACTG------TC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1260302 30 - 7082604 --TGTTTCTCTAGACCTGAGCCGAGAATCG------CC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1354007 30 + 1864846 --TGTTTCTCTAGAACTGGGCCGAGAACCA------TC i cebCap1.NW_016107827v1 I 16 C 0 s aotNan1.NW_018513311v1 173086 30 + 287728 --TGTTTCTCTAGAACTAAGCCGAGAACTG------TC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 952248 28 + 5252280 --TGCTTCTCTGGAAGCCAGCAAAGCCCTC-------- i otoGar3.GL873658 I 24 C 0 s mm10.chr12 90030620 36 - 120129022 --GGGTTCCCCAGAACTCAGCAGGGCCCTGGGGACCTC i mm10.chr12 C 0 I 1 s dasNov3.JH576208 1778579 31 + 4416731 TCTGTTTCTTCAGAACGTATCATAGAATCT------C- i dasNov3.JH576208 C 0 C 0 e colAng1.NW_012118821v1 1441105 14 - 13651311 I a score=2860548.000000 s hg38.chr2_KI270774v1_alt 170165 209 + 223625 CTTGCCTTGTGCATGGTATTTTCCAGGTGGTTTGGACCCACTAATACGAGGCCTTCTTGCAAGACCAGCCAAACTGCAGGTGCAGGATCAGCTGATGAACGAGGAGCTGACGGAAAGGCTCTTTGTGCTGTCCAATTCCAGCACCTTGGATCTGGCGTCCATCAACCTGCAGAGGGGCCGGGACCACGGGCTGCCAGGTCTGCCAGTTC s panTro5.chr2A 1467267 209 + 111504155 CTTGCCTTGTGCATGGTATTTTCCAGGTGGTTTGGACCCACTAATACGAGGCCTTCTTGCAAGACCAGCCAAACTGCAGGTGCAGGATCAGCTGATGAACGAGGAGCTGACGGAAAGGCTCTTTGTGCTGTCCAATTCCAGCACCTTGGATCTGGCGTCCATCAACCTGCAGAGGGGCCGGGACCACGGGCTGCCAGGTCTGCCAGTTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1405518 209 + 114371477 CTTGCCTTGTGCATGGTATTTTCCAGGTGGTTTGGACCCACTAATACGAGGCCTTCTTGCAAGACCAGCCAAACTGCAGGTGCAGGATCAGCTGATGAACGAGGAGCTGACGGAAAGGCTCTTTGTGCTGTCCAATTCCAGCACCTTGGATCTGGCGTCCATCAACCTGCAGAGGGGCCGGGACCACGGGCTGCCAGGTCTGCCAGTTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1429917 209 + 1464242 CTTGCCTTGTGCATGGTATTTTCCAGGTGGTTTGGACCCACTAATACGAGGCCTTCTTGCAAGACCAGCCAAACTGCAGGTGCAGGATCAGCTGATGAACGAGGAGCTGACGGAAAGGCTCTTTGTGCTGTCCAATTCCAGCACCTTGGATCTGGCGTCCATCAACCTGCAGAGGGGCCGGGACCACGGGCTGCCAGGTCTGCCAGTTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1153860 209 + 81552678 CTTGCCTTGTGCATGGTATTTTCCAGGTGGTTTGGACCCACTAATACGAGGCCTTCTTGCAAGACCAGCCAAACTGCAGGTGCAGGATCAGCTGATGAATGAGGAGCTGACGGAAAGGCTCTTTGTGCTGTCCAATTCCAGCACCTTGGATCTGGCGTCCATCAACCTGCAGAGGGGCCGGGACCACGGGCTGCCAGGTCTGCCAGTTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1483227 209 + 108979918 CTTGCTTTGCACATGGTATTTTCCAGGTGGTTTGGACCCACTAATACGAGGCCTTCTTGCAAGACCAGCCAAACTGCAGGTGCAGGATCAGCTGATGAACGAGGAACTGACGGAAAGGCTCTTTGTGCTGTCCAATTCCAGCACCTTGGATCTGGCGTCCATCAACCTGCAGAGGGGCCGGGACCACGGGCTGCCAGGTCTGCCAGTTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1455668 209 - 111193037 CTTGCTTTGCACATGGTATTTTCCAGGTGGTTTGGACCCACTGATACGAGGCCTTCTTGCAAGACCAGCCAAACTGCAGGTGCAGGATCAGCTGATGAACGAGGAACTGACGGAAAGGCTCTTTGTGCTGTCCAATTCCAGCACCTTGGATCTGGCGTCCATCAACCTGCAGAGGGGCCGGGACCACGGGCTGCCAGGTCTGCCAGTTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1483775 209 + 3644372 CTTGCTTTGCACATGGTATTTTCCAGGTGGTTTGGACCCACTAATACGAGGCCTTCTTGCAAGACCAGCCAAACTGCAGGTGCAGGATCAGCTGATGAACGAGGAACTGACGGAAAGGCTCTTTGTGCTGTCCAATTCCAGCACCTTGGATCTGGCGTCCATCAACCTGCAGAGGGGCCGGGACCACGGGCTGCCAGGTCTGCCAGTTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1438342 209 - 10304083 CTTGCCTTGCACGTGGTATTTTCCAGGTGGTTTGGACCCACTAATACGAGGCCTTCTTGCAAGACCAGCCAAACTGCAGGTGCAGGATCAGCTGATGAACGAGGAACTGACAGAAAGGCTCTTTGTGCTGTCCAATTCCAGCACCTTGGATCTGGCGTCCATCAACCTGCAGAGGGGCCGGGACCATGGGCTGCCAGGTCTGCCAGTTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1515995 209 - 107702431 CTTGCCTTACACATGGTATTTTCCAGGTGGTTTGGACCCACTACTACGAGGCCTTCTTGCAAGACCAGCCAAACTGCAGGTGCAGGATCAGCTGATGAACGAGGAACTGACGGAAAGGCTCTTTGTGCTGTCCAATTCCAGCACCTTGGATCTGGCGTCCATCAACCTGCAGAGGGGCCGGGACCACGGGCTGCCAGGTCTGCCAGTTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1003826 209 - 2200435 CTTGCCTTGCACGTGGTATTTTCCAGGTGGTCTGGACCCACTAATACGAGGCCTTCTTGCGAGACCAGCCAAACTGCAGGTGCAGGATCAGCTGATGAACGAGGAACTGACGGAAAGGCTCTTTGTGCTGTCCAATTCCAGCACCTTGGATCTGGCGTCCATCAACCTGCAGAGGGGCCGGGACCACGGGCTGCCAGGTCTGCCAGTTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1441119 209 - 13651311 CTTGCCTTACGCATGGTATTTTCCAGGTGGTTTGGACCCACTAATACGAGGCCTTCTTGCAAGACCAGCCAAACTGCAGGTGCAGGATCAGCTGATGAACGAGGAACTGACGGAAAGGCTCTTTGTGCTGTCCAATTCCAGCACCTTGGATCTGGCGTCCATCAACCTGCAGAGGGGCCGGGACCACGGGCTGCCAGGTCTGCCAGCTC i colAng1.NW_012118821v1 I 14 C 0 s calJac3.chr14 1431331 207 - 108792865 CTTGCCTT-TGCCTGGTG-TTTGCAGGTGGTTTGGACCCGCTAGTACGAGGCCTCCTCGCAAGACCAGCCAAACTGCAGCTGCAGGATCAGCTGATGAACGAGGAGCTGACGGAAAGGCTCTTCATGCTGTCAAATTCCAGCACCTTGGACCTGGCGTCCATCAACCTGCAGAGGGGCCGGGACCACGGGCTGCCAGGTCTGCCAGTTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1260332 196 - 7082604 CTTGCC-------------TTTGCAGGTGGTTTGGACCCACTCGTCCGAGGCCTCCTTGCGAGACCAGCCAAACTGCAGCTGCAGGATCAGCTGATGAACGAGGAGCTGACGGAAAGGCTCTTCATGCTGTCCAATTCCAGCACCTTGGATCTGGCGTCCATCAACCTGCAGAGGGGCCGGGACCACGGACTGCCAGGTCTGCCAGTTC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1354037 208 + 1864846 CTTGCCTT-TGCATGGTATTTTGCAGGTGGTTTGGACCCGCTAGTCCGAGGCCTCCTTGCAAAACCAGCCAAACTGCAGCTGCAGGATCAGCTGATGAATGAGGAGCTGACGGAAAGGCTCTTCATGCTGTCCAATTCCAGCACCTTGGATCTGGCGTCCATCAACCTGCAGAGAGGCCGGGACCACGGGCTTCCAGGTCTGCCAGTTC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 173116 207 + 287728 CTTGCCTT-TGCATGGTATTTTGCAGGTGGTTTGGACCCACTAGTACGAGGCCTCCTTGCGAGACCAGCCAAACTGCAGCTTCAGGACCAGCTGATGAACGAGGAGCTGACGGAAAGGCTCTTCATGCTGCCAAATT-CAGCACCTTGGACCTGGCGTCCATCAACCTGCAGAGGGGCCGGGACCACGGGCTGCCAGGTCTGCCAGTTC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 952276 202 + 5252280 CTTGCTGTCTGCATGGTATTTTCCAGGGGGTTTGGACCCTCTGGTCAGAGGCCTTCTTGCAAGACCAGCCAAACTGCAGGTACAGGACCAGCTGATGAATGAGGAGCTGACACAGATGCTCTTTGTGCTGCCCAACTCCAGTGCCCTGGACCTGGCATCCATCAACCTGCAGCGTGGCCGGGACCACGGCCTGCCAGGTCTG------- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90030657 209 - 120129022 CTTGATTTGTACGTGGTGCCTTTCAGGTGGTTTGGATCCGATAGTGAGAGGCCTCCTGGCGAGAGCAGCCAAGCTGCAAGTCCAAGGGCAGCTGATGAATGAGGAGCTGACCGAGAGGCTCTTCGTGCTGTCTAACGTGGGCACCTTGGATCTGGCATCACTGAACTTGCAGAGGGGCCGGGATCATGGCTTACCAGGTTGGTCGGGTC i mm10.chr12 I 1 I 3028 s dasNov3.JH576208 1778610 209 + 4416731 TTTGTCTTTTCCATGATGTTTTCCAGGTGGTTTGGACCCAGTGGTCAGGGGCCTTCTTGCAAGATCGGCGAAATTGCAGGTGCAAGGTCAACTGATGAATGAGGAACTGACGGAAAAACTCTTTGTGCTGTCGAATTCAGGCACCCTGGATTTGGCCTCACTGAATTTGCAGAGGGGCCGCGACCATGGCCTACCAGGTCTGCCACTGC i dasNov3.JH576208 C 0 I 6 a score=6160437.000000 s hg38.chr2_KI270774v1_alt 170374 653 + 223625 CTTCCCT------TGCACACCTCATGCA-GCTGCTGCGGGATTTGCCGAGCTAGCAACCTGCTGCTAGAGAGACTGATTTAGAGGAAAA--CAATCACAAATCTGAGGCCTTCT-------AAGCAACGGCTCTTAAAGGGCTCCAGTTCATTCAGCTAAAGTGGCCACTTCCAGCTTTTCTTAGA-GATAGAAATGGCACGAAGAGGGTGGTTCTGAACCTCCCAGGAAC-GTATGAGCTGGGACCTTGAGAAACAGCCGCTTCTAGTAGAGGGAGGAGGGAGTGCGCGGGCAGACAATGGCAGGTCTGTATCTGGTATCCCGGGA-----------AGCTCCTGG----------GATGGCTAGAGTGC--CCCCCTCCCCTTCTCCTCCCCACCACAAGGTCCC--AGAGCCTGCAAAGATCATTCCGTCAC-ATCAGGACTGCTGTTAACTAA-CTGGTCCAA---GCTGGCCC-CTGGCAGGAG---TGGCTG-CTCCTCTCAGGCCAG--------CAGCC-CCCTGTGC-TCCCCACACCCCACCCGGCTCCTGCCTTTCCCAGGCCCC------ACCCGG-CAGC-----------CTCCTCCCTGACCTG-----------CCCAGTTTCCAA-----------------CTCCCTGACCT-CAGGCCCACCTCAGCCTTCCCTCCTCTGGGCTCCTAGGTGGTTCGGTTGTCTGGTCAACCTGCAGCACCTGTCTAGGCC--CGATC---CCCTGACA s panTro5.chr2A 1467476 653 + 111504155 CTTCCCT------TGCACACCTCATGCA-GCTGCTGCGGGATTTGCCGAGCTAGCAACCTGCTGCTAGAGAGACTGATTTAGAGGAAAA--CAATCACAAATCTAAGGCCTTCT-------AAGCAACGGCTCTTAAAGGGCTCCAGTTCATTCAGCTAAAGTGGCCACTTCCAGCTTTTCTTAGA-GATAGAAATGGCACGAAGAGGGTGGTTCTGAACCTCCCAGGAAC-GTATGAGCTGGGACCTTGAGAAACAGCCGCTTCTAGTAGAGGGAGGAGGGAGTGCACGGGCAGACAATGGCAGGTCTGTGTCTGGTATCCCGGGA-----------AGCTCCTGG----------GATGGCTAGAGTGC--CCCCCTCCCCTTCTCCTCCCCACCACAAGGTCCC--AGGGCCCGCAAAGATCATTCCATCAC-ATCAGGACTGCTGTTAACTAA-CTGGTCCAA---GCTGGCCC-CTGGCAGGAG---TGGCTG-CTCCTCTCAGGCCAG--------CAGCC-CCCTGTGC-TCCCCACACCCCACCTGGCTCCTGCCTTTCCCAGGCCCC------ACCCGG-CAGC-----------CTCCTCCCTGACCTG-----------CCCAGTTTCCAA-----------------CTCCCTGACCT-CAGGCCCACCTCAGCCTTCCCTCCTCTGGGCTCCTAGGTGGTTCGGTTGTCTGGTCAACCTGCAGCACCTGTCTAGGCC--CGATC---CCCTGACA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1405727 653 + 114371477 CTTCCCT------TGCACACCTCATGCA-GCTGCTGCGGGATTTGCCGAGCTAGCAACCTGCTGCTAGAGAGACTGATTTAGAGGAAAA--CAATCTCAAATCTAAGGCCTTCT-------AAGCAATGGCTCTTAAAGGGCTCCAGTTCATTCAGCTAAAGTGGCCACTTCCAGCTTTTCTTAGA-GATAGAAATGGCACGAAGAGGGTGGTTCTGAACCTCCCAGGAAC-GTATGAGCTGGGACCTTGAGAAACAGCCGCTTCTAGTAGAGGGAGGAGGGAGTGCACGGGCAGACAATGGCAGGTCTGTGTCTGGTATCCTGGGA-----------AGCTCCTGG----------GATGGCTAGAGTGC--CCCCCTCCCCTTCTCCTCCCCACCACAAGGTCCC--AGGGCCCGCAAAGATCATTCCGTCAC-ATCAGGACTGCTGTTAACTAA-CTGGTCCAA---GCTGGCCC-CTGGCAGGAG---TGGCTG-CTCCTCTCAGGCCAG--------CAGCC-CCCTGTGC-TCCCCACACCCCACCTGGCTCCTGCCTTTCCCAGGCCCC------ACCCGG-CAGC-----------CTCCTCCCTGACCTG-----------CCCAGTTTCCAA-----------------CTCCCTGACCT-CAGGCCCACCTCAGCCTTCCCTCCTCTGGGCTCCTAGGTGGTTCGGTTGTCTGGTCAACCTGCAGCACCTGTCTAGGCC--CGATC---CCCTGACA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1430126 652 + 1464242 CTTCCCT------TGCACACCTCATGCA-GCTGCTGCGGGATTTGCCGAGCTAGCAACCTGCTGCTAGAGAGACTGATTTAGAGGAAAA--CAATCACAAATCTAAGGCCTTCT-------AAGCAACGGCTCTTAAAGGGCTCCAGTTCATTCAGCTAAAGTGGCCACTTCCAGCTTTTCTTAGA-GATAGAAATGGCACGAAGAGGGTGGTTCTGAACCTCCCAGGAAT-GTATGAGCTGGGACCTTGAGAAACAGCCGCTTCTAGTAGAGGGAGGAGGGAGTGCGCGGGCAGACAATGGCAGGTCTGTGTCTGGTATCCCGGGA-----------AGCTCCTGG----------GATGGCTAGAGTAC--CCCCCTCCCCTTCTCCTCCCCACCACAAGGTCCC--AGGGCCTGCAAAAATCATTCCGTCAC-ATCAGGACTGCTGTTAACTAA-CTGGTCCAA---TCTGGTCC-CTGGCAGGAG---TGGCTG-CTCCTCTCAGGCCAG--------CAGCC-CCCTGTGC-TCCCCACACCCCACCTGGCTCCTGCCTTTCCCAGGCCCC------ACCCGG-CAGC-----------CTCCTCCCTGACCTG-----------CCCAGTTTCCAA-----------------CT-CCTGACCT-CAGGCCCACCTCAGCCTTCCCTCCTCTGGGCTCCTAGGTGGTTCGGTTGTCTGGTCAACCTGCAGCACCTGTCTAGGCC--CGATC---CCCTGACA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1154069 653 + 81552678 CTTCCCT------TGCACACCTCATGCA-GCTGCTGCGGGATTTGCCGAGCTAGTAACCTGCTGCTAGAGAAACTGATTTACAGTAAAA--CAATCGCAAATCTAACGCCTTCT-------AAGCAATGGCTCTTAAAGGGCTCCAGTTCATTCAGCTAAAGAGGCCACTTCCAGCTTTTCTTAGA-GATAGAAATGGCACGAAGAGGGTGGTTCTGAACCTCCCAGGAAT-GTATGAGCTGGGACCTTGAGAAACAGCCACTTCTAGTAGAGGGAGGAGGCAGTGCGCAGGCAGACAATGGCAGGTCTGTGTCTGGCGTCCCAGGA-----------AGCTCCTGG----------GATGGCTAGAGTGC--CCCCCTCCCTTTCTCCTCCCCACCACAAGGTCCC--AGGGCCTGCAGAGATCATTCCACCAC-ATCAGGACTGCTGTTAACTAA-CTGGTCCAA---GCTGGCCC-CTGGCAGGAG---TGGCTG-CTTCTCTCAAGCCAG--------CAGCC-CCTTGTGC-TTCCCACACCCCACCTGGCTCCTGCCTTTCCCAGGCCCC------ACCCTG-CAGC-----------CTCCTCCCTGACCTG-----------CCCAGTTCCCAA-----------------CTCCCTGACCT-CAGGCCCACCTCAGGCTTCCCTCCTCTGGGCTCCTAGGTGGTTTGGTTGTCTGGTCAACCTGCAGCACCTGTCTAGACC--TGATC---CCCTGACA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1483436 653 + 108979918 CTTCCCT------TGCACACCTCACGCA-GCTGCTGCAGGATTTGCCGAGTTAGCAACCTGCTGCTAGAGAGACTGATTTAAAGTAAAA--CAATCACAAATCTAATGCCTTCT-------AAGCAATGGCTCTTAAAGGACTCCAGTTCATTCAGCTATAGAGGCCACTTCGAGCTTTTCTTAGA-GAGAGAAATGGCACAAAGAGGGTGGTTCTGAACCTCCCAGGGAC-GTATGAGCTAGGACCTTGAGAAACACCCACTTCTAGTAGAGGGAGGAGGCACTGCATGGGCAGACAATGGCAGGTCTTCGTCTGGCGTCCCGGGA-----------AGCTCCTGG----------GATTGCTAGAGTGC--CCCCGTCCCCTTCTCCTCCCCCCAGCGAGATCCT--AGGGCCTGCAGAGATCGTTCCACCAC-ATCAGGACTGCTGTTAGCTAA-CTGGTCCAA---GCTGGCCC-CTGGTGGGAG---TGGCTG-CTCCTCTCAGGCCAG--------CAGCC-CCCTGTGC-TCCCTACACCCGACCTGGCTCCTGCCTTTCCCAGGCCCC------ACCGCG-CAGC-----------CTCCTCCCTGACCTG-----------CCCAGTTCCCAA-----------------CTCCCTGACCT-CAGGCCCACCTCAGCCTTCCCTCCTCTGGGCTCCTAGGTGGTTCAGTTGTCTGGTCAACCTGCAGCACCTGTCCAGGCC--CGATC---CCCTGAGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1455877 653 - 111193037 CTTCCCT------TGCACACCTCACGCA-GCTGCTGCAGGATTTGCCGAGTTAGCAACCTGCTGCTAGAGAGACTGATTTAAAGTAAAA--CAATCACAAATCTAATGCCTTCT-------AAGCAATGGCTCTTAAAGGACTCCAGTTCATCCAGCTATAGAGGCCACTTCGAGCTTTTCTTAGA-GAGAGAAATGGCACAAAGAGGGTGGTTCTGAACCTCCCAGGGAC-GTATGAGCTAGGACCTTGAGAAACACCCGGTTCTAGTAGAGGGAGGAGGCACTGCACGGGCAGACAATGGCAGGTCTGCGTCTGGCGTCCCGGGA-----------AGCTCCTGG----------GATGGCTAGAGTGC--CCCCGTCCCCTTCTCCTCCCCCCAGCGAGATCCT--AGGGCCTGCAGAGATCGTTCCACCAC-ATCAGGACTGCTGTTAGCTAA-CTGGTCCAA---GCTGGCCC-CTGGTGGGAG---TGGCTG-CTCCTCTCAGGCCAG--------CAGCC-CCCTGTGC-TCCCTACACCCGACCTGGCTCCTGCCTTTCCCAGGCCCC------ACCGCG-CAGC-----------CTCCTCCCTGACCTG-----------CCCAGTTCCCAA-----------------CTCCCTGACCT-CAGGCCCACCTCAGCCTTCCCTCCTCTGGGCTCCTAGGTGGTTCGGTTGTCTGGTCAACCTGCAGCACCTGTCCAGGCC--CGATC---CCCTGAGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1483984 653 + 3644372 CTTCCCT------TGCACACCTCACGCA-GCTGCTGCAGGATTTGCCGAGTTAGCAACCTGCTGCTAGAGAGACTGATTTAAAGTAAAA--CAATCACAAATCTAATGCCTTCT-------AAGCAATGGCTCTTAAAGGACTCCAGTTCATTCAGCTATAGAGGCCACTTCGAGCTTTTCTTAGA-GAGAGAAATGGCACAAAGAGGGTGGTTCTGAACCTCCCAGGGAC-GTATGAGCTAGGACCTTGAGAAACACCCGCTTCTAGTAGAGGGAGGAGGCACTGCACGGGCAGACAATGGCAGGTCTGCGTCTGGCGTCCCGGGA-----------AGCTCCTGG----------GATGGCTAGAGTGC--CCCCGTCCCCTTCTCCTCCCCCCAGCGAGATCCT--AGGGCCTGCAGAGATCGTTCCACCAC-ATCAGGACTGCTGTTAGCTAA-CTGGTCCAA---GCTGGCCC-CTGGTGGGAG---TGGCTG-CTCCTCTCAGGCCAG--------CAGCC-CCCTGTGC-TCCCTACATCCGACCTGGCTCCTGCCTTTCCCAGGCCCC------ACCGCG-CAGC-----------CTCCTCCCTGACCTG-----------CCCAGTTCCCAA-----------------CTCCCTGACCT-CAGGCCCACCTCAGCCTTCCCTCCTCTGGGCTCCTAGGTGGTTCGGTTGTCTGGTCAACCTGCAGCACCTGTCCAGGCC--CGATC---CCCTGAGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1438551 653 - 10304083 CTTCCCT------TGCACACCTCACGCA-GCTGCTGCAGGATTTGCCGAGTTAGCAACCTGCTGCTAGAGAGACTGATTTAAAGTAAAA--CAATCACAAATCTAATGCCTTCT-------AAGCAATGGCTCTTAAAGGACCCCAGTTCATTCAGCTATAGAGGCCACTTCGAGCTTTTCTTAGA-GAGAGAAATGGCACAAAGAGGGTGATTCTGAACCTCCCAGGGAC-GTATGAGCTAGGACCTTGAGAAACACCTGCTTCTAGTAGAGGGAGGAGGCACTGCACGGGCAGACAATGGCAGATCTGCATCTGGCGTCCTGGGA-----------AGCTCCTGG----------GATGGCTAGAGTGC--CCCCGTCCCCTTCTCCACCCCCCAGCGAGATCCT--AGGGCCTGCAGAGATCATTCCACCAC-ATCAGGACTGCTGTTAGCTAA-CTGGTCCAA---GCTGGCCC-CTGGTGGGAG---TGGCTG-CTCCTCTCAGGCCAG--------CAGCC-CCCTGTGC-TCCCTACACCCGACCTGGCTCTGGCCTTTCCCAGGCCCC------ACCGCA-CAGC-----------CTCCTCCCTAACCTG-----------CCCGGTTCCCAA-----------------CTCCCTGACCT-CAGGCCCACCTCAGCCTTCCCTCCTCTGGGCTCCTAGGTGGTTCGGTTGTCTGGTCAACCTGCAGCACCTGTCCAGGCC--CGATC---CCCTGAGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1516204 647 - 107702431 CTTCCCT------TGCACACCTCA-------TGCTGCAGGATTTGCCGAGTTAGCAACCTGCTGCTAGAGAGACTGATTTAAAGTAAAA--TAATTGCAAATCTAATGCCTTCT-------AAGTAATGGCTCTTAAAGGACCCCAGTTCATTCAGCTATAGAGGCCACCTCCAGCTTTTCTTAGA-GAGAGAAATGGCACAAAGAGGGTGGTTCTGAACCTCCCAGGGAT-GTATGAGCTAGGACCTTGAGAAACACCCGCTTCTAGTAGAGGGAGGAGGCGCTGCATGGACAGACAATGGCAGGTCTGCGTCTGGTGTCCCGGGA-----------AGCTCCTGG----------GATGGCTAGAGTGC--CCCCCTCCTCTTCTCCTCCCCCCAGCGAGATCCT--AGGGCCTGCAGAGATCATTCCACCAC-ATCAAGACTGCTGTTAGCTAA-CTGGTCCAA---GCTGGCCC-CTGGTGGGAG---TGGCTG-CTCCTCTCAGGCCAG--------CAGCC-CGCTGTGC-TCCCTACACCCAACCTGGCTCCCGCCTTTCCCAGGCCCC------ACGCCG-CAGC-----------CTCCTCCCTGACCTG-----------CCCGGTTCCCAA-----------------CTCCCTGACCT-CAGGCCCGCCTCAGCCTTCCCTCCTCTGGGCTCCTAGGTGGTTCGGTTGTCTGGTCAACCTGCAGCACCTGTCCAGGCC--CGATG---CCCTGAGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1004035 653 - 2200435 CTTCCCT------TGCACACCTCACGCA-GCTGCTGCAGGATTTGCTGAGTTAGCAACCTGCTGCTAGAGAGACTGATTTAAAGTAAAA--CAATCACAAATCTAATGCCTTCT-------AAGCAATGGCTCTTAAAGGACCCCAGTTCATTCAGCTATAGCGGCCACTTCGAGCTTTTCTTAGA-GAGAGAAATGGCACAAAGAGGGTGATTCTGAACCTCCCAGGGAC-GTATGAGCTAGGACCTTGAGAAACACCCGCTTCTAGTAGAGGGAGGAGGCGCTGCACGGGCAGACAATGGCAGGTCAGCGTCTGGCGTCCCAGGA-----------AGCTCCTGG----------GATGGCTAGAGTGC--CCCCCTCCCCTTCTCCTCCCCTCAGCGAGATCCT--AGGGCCTGCAGAGATCATTCCACCAC-ATCAGGACCGCTGTTAGCTAA-CTGGTCCAA---GCTGGCCC-CTGGTGGGAG---TGGCTG-CACCTCTCAGGCCAG--------CAGCC-CCCTGTGC-TCCCTACACCCGACCTGGCTCCGGCCTTTCCCAGGCCCC------ACCGCG-CAGC-----------CTCCTCCCTGACCTG-----------CCCAGTTCCCAA-----------------CTCCCTGACCT-CAGGCCCACCTCAGCCTTCCCTCCTCTGGGCTCCTAGGTGGTTCGGTTGTCTGGTCAACCTGCAGCACCTGTCCAGGCC--CGATC---CCCTGAGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1441328 653 - 13651311 CTTCCCT------TGCACACCTCATGCA-GCTGCTGCAGGATTTGCCGAGTTAGCAACCTGCTGCTAGAGAGACTGATTTAAAGTAAAA--CAATCGCAAATCTAATGTCTTCT-------AAGCAATGGCTCTTAAAGGACCCCAGTTCATTCAGCTATAGAGGCCACCTCCAGCTTTTCTTAGA-GAGAGAAATGGCACAAAGAGGGTGGTTCTGAACCTCCCAGGGAC-GTATGAGCTAGGACCTTGAGAAACACCCGCTTCTAGTAGAGGGAGGAGGCACTGCGCGGGCAGACAATGGCGGGTCTGCGTCTGGCGTCCCGGGA-----------AGCTCCTGG----------GATGGCTAGAGTGC--CCCCCTCCCCTTCTCCTCCCCCCAGCGAGATCCT--GGGGCCTGCAGAGATCATTCCACCAC-ATCAGGACTGCTGTGAGCTAA-CTGGTCCAA---GCTGGCCC-CTGGTGGGAG---TGGCTG-CTCCTCTCAGGCCAG--------CAGCC-CCCTGTGC-TCCCTACACCCGACCTGGTTCCTGCCTTTCCCAGGCCCC------ACCCCG-CAGC-----------CTCCTGCCTGACCTG-----------CCCAGTTTCCAA-----------------CTCCCTGACCT-CAGGCCCACCTCAGCCTTCCCTCCTCTGGGCTCCTAGGTGGTTTGGTTGTCTGGTCAACCTGCAGCACCTGTCCAGGCC--TGATC---CCCTGAGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1431538 629 - 108792865 CTTCCCT------TGCCTGCCTCACACC-GCTGCTGTGGGATTTGCCCAGGCAGGAACCTGCTGCTAGGGAGACTGATTGAAAGTAAAACGCATCTGCAAA-------CCTTCT-------AAGCAGCCGCTCTTGAGGG-CCCCGGTTCACTCAGCTTAAGAGGCCACTTCCAGCTTTCCTTAGA-GACAG-AGTGGCACAGAGAGGGTGGTTCTGAGCCTCGCAGGAAC-CTGTGAGCTGGGC-GGTGAGAAACAGCCAGTCCTAGCCGAGGGAGGAGGCACTGCATGAGCAGACAATGGCAGGCCTGCGTCCAGTGTCCTGGGA-----------AGCTCCTGG----------CATGGCTAGGGTGC--TCCCCTCCCCTTCTCCTCCCCCAAACGGCGTCCC--AGGGCCTGCAGAGGTCATTCCACCGC-CTCAGGACTCCTGTCAATGAA--TGGTCCAA---GCTGGCCC-CTGGCGGGAG---TGGCTG-TTCCTCTCAGGCTGG--------CAGC--CCCCGTGC-TCCCCATACCCCACCTGGCTCCTGACTTTCCCGGCCCAC------ACCCTG-CAG-----------------------CCTG-----------CTCAGTTCCTGC-----------------ACCCCTGACCT-CAGGTCCGCCTCAGCCTTGCCTCCCCT-GGCTCCTAGG-GGTTCGGTTGTCTGGTCGACCTGCAGCCCCTGCACAGGCC--CCATC---CCCCAACA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1260528 639 - 7082604 CTTCCCT------TGCCTGCCTCACACA-GCTGCTGTGGGATTTGCCTGGCCAGGAAC---CTGCTAGGGAGAC----TGAAAGTAAAACGCGTCTGCAAACCCAACGCCTTCT-------AAGCAACTGCTCTTAAGGG--CCCGGGTCACTCAGCTTCAGAGGCCACTTCCAGCTTTCCTTAGA-GAC---GGTGGCACAGAGAGGGTGGTTCTGAGCCTCTCAGGAGC-CTGAGAACTGGGG-GGTGAGAAAGAGCCAGTCCTAGTAGAGGGAGGAGGCGCTGCGTGAGCAGACAATGGCAGGCCTGCGTCCGGTGTCCCGGGA-----------AGCTCCTGG----------GATGGCTGGGGTGC--TCCCCTCCCCTTCTCCTCCCCACCACGGGGTCCC--AGGGCCTGCAGAAATCATTCCACCAC-CTCAGGACTTCTGTTAATGAA-CTGGTCCAA---GCTGGCCC-CTGGCGGGAG---TGGCTG-CTCCTCTCAGGCTGG--------CGGCG-CCCTGTAC-TGCCCACACCCCATCTGGCTCCTGCCTGTCCCAGCCCAC------ACCCCG-CAGC-----------CTCCTCCCTGACCTG-----------CTCAGTTCCCAT-----------------ACCCCTGACCT-CGAGTCTGCCTCAGCCTTGCCTCCCAT-GGCTCCTAGG-GGTTCGGTTGTCTGGTTGACCTGCAGCCCCTGTGCA-GCC--CCATC---CCCCAACA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1354245 649 + 1864846 CCTCCCT------TGCCTGCCTCACGCA-GCTGCTGTGGGATTTCCCCAGCCAGGAACCTGCTGCTAGGGAGACTGATTGAAAGTAAAACGCATCTGCAAACCCAACGCCTTCT-------AAGCAACCGCTCTTAAGGG-CCCCGGGTCACTCAGCTTAAGAGGACACTTCCAGCTTTCCTTAGA-GAC---AGTGGCACAGAGAGGGTGGTTCTGAGCCTCACAGGAAC-CTGTGGGCTGGGG-GGTGAGAAACAGCCAGTCCTCATAGAGGGAGGAGGCGCTGCGTGTGCAGACAATGGCAGGCCTGCGTCCAGTGTCCCGGGA-----------AGCTTCTGG----------GATGGCTGGGGTGC--TCCCTTCCTCTTCTCCTCCCCACCACGGGGTCCC--AGGGCCTGCAGAGATCATTCCACCAC-CTCAGGCCTCCTGTTAATGAA-CTGGTCCAA---GCCGGCCC-CTGGCGGGAG---TGGCTGCCTGGCCTCTGGCCGG--------CAGCC-CCCTGTAC-TCCCCACACCCCACCTGGCCCCTGCCTTTCCCGGCCCAC------ACCCCA-CAGC-----------CTCCTCCCTGACCTG-----------CTCCGTTCCCAC-----------------ACCCCTGACCT-CAGGTCCACCCCAGCCTTGCCTCCCCT-GGCTCCTAGG-GGTTTGGTTGTCTGGTCGACCTGCAGCCCCTGTGCAGGCC--CCATC---CCCCGACA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 173323 649 + 287728 CTTCCCT------TGCCCGCCTCACGCA-GCTGCTGTGGGATTTGCCTGGCCAGGAACCTGCTGCTAGGGAGACTGATTGAAAGCAAAACGCATCTGCAAACCCAACGCCTTCT-------AAGCAACTGCTCTTAAGGG-CCCCGGTGCACTCAGCTTAAGAGGCCACTTCCAGCTTTCCTTAGA-GACAG-AGTGGCACAGAGAGGGTGGTTCTGAGCCTCGCAGGAAC-CTGTGAGCTGGGG-GGTGAGAAACAGCCAGGCCTAGTAGAGGGAGGAGGCGCTGCAGGAGCAGACAATGGCAGGCCTGCATCCAGTGTCCCGGGA-----------AGCTCCTGG----------GATGGCTAGGGTGC--CCCCCTCCCCTTCTCCTCCCCACCACGGGGTCCC--AGGGCCTGCAGAGATCATTCCACCAC-CTCAGA--CTCTGTTAACGAAACTGGTCCAA---GCCGGCTC-CTGGCGAGAG---TGGCTG-CTCCTCTCAGGCCAA--------CAGCC-CCCTGTGC-TCCCCACACCCCACCTGGCTCTTGCCTTTCCCAGCCCAC------ACCCCG-CAGC-----------CTCCTCCCTGACCTG-----------CTCAGTTCCCAC-----------------ACCCCTGACCT-CAGGTCCGCCTCAGCCTTGCCTCCCCT-GGCTCCTAGG-GGTTCGGTTGTCTGGTCGACCTGCAGCCCCTGTGCAGGCC--CCATC---CCCTGACA i aotNan1.NW_018513311v1 C 0 I 177 s otoGar3.GL873658 952478 460 + 5252280 ------T------GGCCCTCTCAACACACGCTGCT----------CAGGTCCACATATCTGCCTC--------------------------CAGCAACTAATCAAAGGGCTTCC-------AGAATGTG--------------CGAGCTTGCTCAGACAC--------CCTCCAGCTTCTCTTAGA--AGAGAGACAGC----AGAGGTGGGCACCAGGCCTCC-----------------AGGACTCAGGGGA----------------GAGGGAGGAGGCACCCTCTGGGCAGACA--GGCAGGTGTCGGTCTGGTGTCCAGAG------------AGCTCCTGA-----------ATGGTTGGAATGT--CCCC-TCCCCTTCTCTGCACAATGCCCCTGTCCT--GGGATCCTCAAAGGTCATTCTGCTGC--------CCACCGT-GACCAT-CTGGTCCAG---TCTGACCC-CTGGCATGAG---CAACAA-CTCTGCTCAAGGCAA--------GAGCC-CCATT-------------------------------------GGCCCA------ACCCCT-CA---------------CCTACCCCAATTC-----------CCCACATTCCA--------------------CCCTGCTCT-CAGGCC------------------------------------------ATCTGGCGGACTTGTGGCACCTGTCCAGGCC--TCAGCTGGCCCTGACA i otoGar3.GL873658 C 0 I 1 s dasNov3.JH576208 1778825 753 + 4416731 TTTCCCTTCTGAGTGCTTGCCTCACACT-TTAGGTGTGTCATTAGGCAGATTAGCGACCTGTTCTTTAAGAGACTGCCTTAAAGTAAAACGTATCTGCAAATCTATTGCCCACTTCTAATGAAATGGTAGCTTTTAAATCACTCTGGTGCATTAAACCAAAGAGGACCCTTCTAGCTTTTCTTAGATAATGGAAATGGTGTAAAGAGGC---TCCTGAGCCTCCCAGTAGCTGAAGGAGCAAAGGCAACTGGAAGTAGCATCCCCTGCAAGAGTGAGGAGGAGTTCCA--GGAAAATAATGACAAGCGTGAGTCTGCTCTTCCCAGATGCCGGTCTGTAGCACCCAGAGCTTGTACAGTTGGTTAGTGTCCATTCTCCTTCTTTTTAATTCCATTTCAGAATGTCCTGAAGGACCAGCAGAGATTATTCTGTTGCCATCAAGACAATCACTAAACAG-C-AGTCCAATTTTCTGATCCACCGCTGGGAGCTTTGTTTC-CCTTTCTCAGGTCAGGCAGCTGCCAGCCACGCTGTGCTTTCTCACTCCCCGCTTAGCTCCTGCCATTCCCAGTCCACCACCCAACCCTGACAGCCCTGCTCTCCACTCCTGCCTCCCCTGTGCAAATCTACCTCATCCTTCACTGCCCTTCTCGCACACTTTCCCTGACCTCCACAGCCACCAGGTACCTTCTCTCCTTGATCTCCT--GTAGTTTTACCACCTGGTCT-CCTCTAATATTTGTCCAAGACTTTCATT---ACATGGTA i dasNov3.JH576208 I 6 C 0 e mm10.chr12 90030866 3028 - 120129022 I a score=16624.000000 s hg38.chr2_KI270774v1_alt 171027 2 + 223625 CC s panTro5.chr2A 1468129 2 + 111504155 CC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1406380 2 + 114371477 CC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1430778 2 + 1464242 CC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1154722 2 + 81552678 CC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1484089 2 + 108979918 CC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1456530 2 - 111193037 CC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1484637 2 + 3644372 CC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1439204 2 - 10304083 CC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1516851 2 - 107702431 CC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1004688 2 - 2200435 CC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1441981 2 - 13651311 CC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1432167 2 - 108792865 CC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1261167 2 - 7082604 CC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1354894 2 + 1864846 CC i cebCap1.NW_016107827v1 C 0 I 369 s otoGar3.GL873658 952939 1 + 5252280 T- i otoGar3.GL873658 I 1 C 0 s dasNov3.JH576208 1779578 2 + 4416731 CC i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 173972 177 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I a score=237882.000000 s hg38.chr2_KI270774v1_alt 171029 35 + 223625 TCCTATTCTGTGTGCAGCTCTGTTCTCTCCACGTA s panTro5.chr2A 1468131 35 + 111504155 TCCTATTCTGTGTGCAGCTCTGTTCTCTCCACGTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1406382 35 + 114371477 TCCTATTCTGTGTGCAGCTCTGTTCTCTCCACGTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1430780 35 + 1464242 TCCTATTCTGTGTGCAGCTCTGTTCTCTCCACGTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1154724 35 + 81552678 TCGTATTCTGTGTGCGGCTCCGTTCTCTCCATGTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1484091 35 + 108979918 TCGTATTCTGTGTGCGGCTCTGTTCTCTCCATGCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1456532 35 - 111193037 TCGTATTCTGTGTGCGGCTCTGTTCTCTCCATGCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1484639 35 + 3644372 TCGTATTCTGTGTGCGGCTCTGTTCTCTCTATGCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1439206 35 - 10304083 TCGTATTCTGTGTGCGGCTCTGTTCTCTCCATGCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1516853 35 - 107702431 TCGTATTCTGTGTGCGGCTCTGTTCTCTCCATGCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1004690 35 - 2200435 TCGTAATCTGTGTGCGGCTCTTCTCTCTCCATGCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1441983 35 - 13651311 TCATATTCTGTGTGCGGCTCTGTTCTCTCCATGCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1432169 35 - 108792865 GCTTACTCCCTGTGTAGCGCTGACCTCTCCATGCA i calJac3.chr14 C 0 I 299 s saiBol1.JH378218 1261169 35 - 7082604 GAATACTCCCTGTGTGGTGCTGACCTCTCCACACA i saiBol1.JH378218 C 0 I 42 s otoGar3.GL873658 952940 25 + 5252280 -----CTCTATG---GGCTCTGCTCCTTGCATC-- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1779580 35 + 4416731 TAATTTTCTCCGTGCATATCTGGTCTCCCTTTGTG i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 173972 177 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1354896 369 + 1864846 I a score=88764.000000 s hg38.chr2_KI270774v1_alt 171064 11 + 223625 CCCTGGGAGCT s panTro5.chr2A 1468166 11 + 111504155 CCCTGGGAGCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1406417 11 + 114371477 CCCTGGGAGCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1430815 11 + 1464242 CCCTTGGAGCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1154759 11 + 81552678 CCCTAAGAGGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1484126 11 + 108979918 CCCTGGGAGCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1456567 11 - 111193037 CCCTGGGAGCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1484674 11 + 3644372 CCCTGGGAGCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1439241 11 - 10304083 CCCTGGGAGCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1516888 11 - 107702431 CCCTGGGAGCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1004725 11 - 2200435 CCCTGGGAGCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1442018 11 - 13651311 CCCTGGGAGCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1432503 10 - 108792865 CCCTGGGAGC- i calJac3.chr14 I 299 C 0 s saiBol1.JH378218 1261246 10 - 7082604 CCCCTGGAGC- i saiBol1.JH378218 I 42 C 0 s otoGar3.GL873658 952965 11 + 5252280 CCCTGGGGGCT i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1779615 11 + 4416731 CCTTGTAGGCT i dasNov3.JH576208 C 0 I 391 e aotNan1.NW_018513311v1 173972 177 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1354896 369 + 1864846 I a score=134509.000000 s hg38.chr2_KI270774v1_alt 171075 20 + 223625 TGGGAGGTGCCCTCCTGTTG s panTro5.chr2A 1468177 20 + 111504155 TGGGAGGTGCCCTCCTGTTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1406428 20 + 114371477 TGGGAGGTGCCCTCCTGTTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1430826 20 + 1464242 TGGGAGGTGCCCTCCTGTTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1154770 20 + 81552678 TGGGAGGTGCCCTCCTGTTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1484137 20 + 108979918 TGGGAGGTGCCCTCCTATTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1456578 20 - 111193037 TGGGAGGTGCCCTCCTATTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1484685 20 + 3644372 TGGGAGATGCCCTCCTATTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1439252 20 - 10304083 TGGGAGGTGCCCTCCTATTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1516899 20 - 107702431 TGGGAGGTGCCCTCCTATTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1004736 20 - 2200435 TGGGAGGTGCCCTCCTATTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1442029 20 - 13651311 TGGGAGGTGCCCTCCTATTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1432513 18 - 108792865 TGGAAGGGCCCCTTCTGA-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1261256 18 - 7082604 TGGAAGGTGCACTTCTGA-- i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 952976 19 + 5252280 CAGGGGGTGCCCTCTGGGG- i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 173972 177 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1354896 369 + 1864846 I e dasNov3.JH576208 1779626 391 + 4416731 I a score=522692.000000 s hg38.chr2_KI270774v1_alt 171095 83 + 223625 TGTGTGGGTGACATGTG-AGATGGACAGTGCTGGCAAGTcctgccctgccccgtccctgggccttcctctgtcccctggccctt s panTro5.chr2A 1468197 83 + 111504155 TGTGTGGGTGACATGTG-AGATGGACAGTGCTGGCAAGTCCTGCCCTGCCCCATCCCTGGGCCTTCCTCTGTCCCCTGGCCCTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1406448 83 + 114371477 TGTGTGGGTGACATGTG-AGATGGACAGTGCTGGCAAGTCCTGCCCTGCCCCATCCCTGGGCCTTCCTCTGTCCCCTGGCCCTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1430846 83 + 1464242 TGTGTGGGTGACATGTG-AGATGGACAGTGCTGGCAAGTcctgccctgccccgtccctggtccttcctctgtcccctggccctt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1154790 83 + 81552678 TGTGTGGGTGACATGTA-AGATGGACAGTGCTGCTAAGTCCTGTCGTGccccgtccctgggccttcctctgtcccctggccctt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1484157 83 + 108979918 TGCGTGGGTGACATGTG-ACACGGACAGTGCTGGCAAGTCTTGTTCTGCCACATCCCTGGGCCTTCCTCTGTCCCCTGGCCCTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1456598 83 - 111193037 TGCGTGGGTGACATGTG-ACACGGACAGTGCTGGCAAGTCTTGTTCTGCCACATCCCTGGGCCTTCCTCTGTCCCCTGGCCCTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1484705 83 + 3644372 TGCGTGGGTGACATGTG-ACACGGACAGTGCTGGCAAGTCTTGTTCTGCCACATCCCTGGGCCTTCCTCTGTCCCCTGGCCCTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1439272 82 - 10304083 TGCGTGGGTAACATGTG-ACACGGACAGTGCTGGCAAGTCTTGTTCTGCCACAT-CCTGGGCCTTCCTCTGTCCCCTGGCCCTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1516919 83 - 107702431 TGCATGGGTGACATGTG-ACATGGACAGTACTGGCAAGTCTTGTTCTGCCGCATCCCTGGGCCTTCCTCTGTCCCCTGGCCCTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1004756 64 - 2200435 TGCGTGGGTGACATGTG-AGATGGACAGTAGTGGCAAGTCTTGTTCTGCCACAT-------------------CCCTGGCCCTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1442049 83 - 13651311 TGCGTGGGTGACATGTG-AGATGGACAGTGCTGGCAAGTCTTGTTATGCCACATCCCTGGGCCTTCCTCTGTTCCCTGGCCCTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1432531 81 - 108792865 TGTGTGGGTGACAGGTG-AGATGGATGGTGCCAGCAAGTCCTGCTCATTC-TGTCCCTGGGCCCTCCCCTGTCCCTGGGCATT- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1261274 62 - 7082604 TGTGTGGGTCACAGGTG-AGGCGGAT-GTGCCAGCAAGTTCTGCTTATT-------------------CTGTCCCTGGGCATT- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1355265 81 + 1864846 TGTGTGGGTGACAGGTG-AGGCGGACAGTGCCAGCAAGTTCTGCTCATTC-Cgtccctgggccctcccctgtccctgggcgtt- i cebCap1.NW_016107827v1 I 369 C 0 s otoGar3.GL873658 952995 61 + 5252280 AGTGTCAGTG-CATCTGTAGACCCACCGGG--GACAGGTCCCGCTGTGAT-------CAGGGCTGCCTAAA------------- i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 173972 177 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e dasNov3.JH576208 1779626 391 + 4416731 I a score=7800.000000 s hg38.chr2_KI270774v1_alt 171178 1 + 223625 c s panTro5.chr2A 1468280 1 + 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1406531 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1430929 1 + 1464242 c i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1154873 1 + 81552678 c i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1484240 1 + 108979918 C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1456681 1 - 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1484788 1 + 3644372 C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1439354 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1517002 1 - 107702431 C i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1004820 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1442132 1 - 13651311 C i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1780017 1 + 4416731 C i dasNov3.JH576208 I 391 C 0 e aotNan1.NW_018513311v1 173972 177 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1261336 0 - 7082604 C e cebCap1.NW_016107827v1 1355346 0 + 1864846 C e otoGar3.GL873658 953056 0 + 5252280 C e calJac3.chr14 1432612 0 - 108792865 C a score=1660513.000000 s hg38.chr2_KI270774v1_alt 171179 176 + 223625 ccccatccc--tgTCTTCCTCACCAGTGGCATCTGGAAGGGCTGGGATCAGCAGCCACACAGGCTGTGAATATCTGGGGACTAAATGTGAGTTGGGAGGATGCAGAAGGGG---CCCCTATGTGTGTCAG--GATAACGCACACTGTCCCCCTCACTCCCTGCAC-CCAAACACAGCTGCTTTC s panTro5.chr2A 1468281 176 + 111504155 CCCCATCCC--TGTCTTCCTCACCAGTGGCATCTGGAAGGGCTGGGATCAGCAGCCACGCAGGCTGTGAATATCTGGGGACTAAATGTGAGTTGGGAGGATGCAGAAGGGG---CCCCTATGTGTGTCAG--GATAACGCACACTGTCCCCCTCACTCCCTGCAC-CCAAACACAGCTGCTTCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1406532 176 + 114371477 CCCCATCCC--TGTCTTCCTCACCAGTGGCATCTGGAAGGGCTGGGATCAGCAGCCACGCAGGCTGTGAATATCTGGGGACTAAATGTGAGTTGGGAGGATGCAGAAGGGG---CCCCTATGTGTGTCAG--GATAACGCACACTGTCCCCCTCACTCCCTGCAC-CCAAACACAGCTGCTTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1430930 176 + 1464242 ccccatccc--tgtcTTCCTCACCAGTGGCATCTGGAAGGGCTGGGATCAGCAGCCACACAGGCTGTGAATATCTGGGGACTAAATGTGAGTTGGGAGGATGCAGAAGGGG---CCCCTATGTGTGTCAG--GATAACGCACACTGTCCCCCTCACTCCCTGCAC-CCAAACACAGCTGCTTCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1154874 176 + 81552678 cccCATCCC--TATCTTCCTCACCAGTGGCGTCTGGAAGGGCTGGGATCAGCAGCCACACAGGCTGTGAATATCTGGGGACTAAATGTGAGTTGGGAGGATGCAGAAGGGG---CCCCCATGTGTGTCAG--GATAACGCACACTGTCCCCCTCACTCCCTGCAC-CCAAACACAGCTGCTTCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1484241 175 + 108979918 CCCCATTCC--TGCCTTCCTTACCAGTGGCACCTGGAAGGGCTGGGATCAGCAACCACACAGGCTGTGAATATCTGGGGACTAAATGTGAGTTGGGAGGATGCAGAAGGGG---CCCC-ATGTGTGTCAG--GATAATGCACACTGTCCCCCTCACTCCCTGCAC-CCAAACACAGCTGCTTCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1456682 175 - 111193037 CCCCATTCC--TGCCTTCCTTACCAGTGGCACCTGGAAGGGCTGGGATCAGCAACCACACAGGCTGTGAATATCTGGGGACTAAACGTGAGTTGGGAGGATGCAGAAGGGG---CCCC-ATGTGTGTCAG--GATAATGCACACTGTCCCCCTCACTCCCTGCAC-CCAAACACAGCTGCTTCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1484789 175 + 3644372 CCCCATTCC--TGCCTTCCTTACCAGTGGCACCTGGAAGGGCTGGGATCAGCAACCACACAGGCTGTGAATATCTGGGGACTAAACGTGAGTTGGGAGGATGCAGAAGGGG---CCCC-ATGTGTGTCAG--GATAATGCACACTGTCCCCCTCACTCCCTGCAC-CCAAACACAGCTGCTTCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1439355 175 - 10304083 CCCCATTCC--TGCCTTCCTTACCAGTGGCACCTGGAAGGGCTGGGATCAGCAACCACACAGGCTGTGAATATCTGGGGACTAAACGTGAGTTGGGAGGATGCAGAAGGGG---CCCC-GTGTGTGTCAG--GATAATGCACACTGTCCCCCTCACTCCCTGCAC-CCAAACACAGCTGCTTCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1517003 174 - 107702431 CCCCATTCC--TGTCTTCCTTACCAGTGGCATCTGGAAGGGCTGGGATCAGCAACCACACAGGCTGGGAATATCTGGGGACTAAACATGAGTTGGA-GGATGCAGAAGGGG---CCCC-ATGTGTGTCAG--GATAATGCACACTGTCCCCCTCACTCCCTGCAC-CCAAACACAGCTGCTTCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1004821 174 - 2200435 CCCCATTCC--TGTCTTCCTTACCAGTGGCATCTGGAAGGGCTGAGATCAGCAACCACACAGGCTGTGAATATCTGGGGACTAAACGTGAGTTGGG-AGGATCAGAAGGGG---CCCC-ATGTGTGTCAG--GATAGTGCATACTGTCCCCCTCACTCCCTGCAC-CCAAACACAGCTGCTTCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1442133 175 - 13651311 CCCCTTTCC--TGTCTGCCTTACCAGTGGCATCTGGAAGGGCTGGGATCTGCAACCACACAGGCTGTGAGTATCTGGGGACTAAATGTGAGTTGGGAGGATGCAGAAGGAG---CCCC-ACGTGTGTCAG--GATAATGCACACTGTGCCCCTCACTCCCTGCAC-CCAAACACAGCTGCTTCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1432612 173 - 108792865 CCCCATCCC--TGTCCTCCTCAGCAG-GGCATCTGGAAGGGCTGGGGTCAGCAGCCACATAGGCTGTGAATATCT-GGGACCAAACATGAGTTGGGAAGATGCAGAAGGGG---CACTCG--TGTTTCAG--GGTAGTGCACACAGTCCCCTGTGCTCTCTGCACACCACACGCAGCTGCTTCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1261336 170 - 7082604 CCCCATCCC--TGTCCTCCTCAGCAG-GGCATCTGGGAGGGCTGGGGTCAGCAACCACACAGGCTGTGAATATCT-GGGACTAAACGTGAGTTGCGAGGATGCAGAAGGGG---CACTC-----TTTCAG--GATCGCGCACACAGTCCCCCGTGCTCCCTGCACCCCACACGCAGCTGCTTCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1355346 175 + 1864846 ccccatccc--tgtccTCCTCAGCAG-GGCATCTGGAAGGGCTGGGGTCAGCACCCACGCAGGCTGTGAATATCT-GGGACTAAACGTGAGTTGAGAGGACGCAGAAGGGG---CACTCGTATGTTTCAG--GATCACGCACACAGTCCCCCGTGCTCCCTACACCCCACACGCAGCTGCTTCC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 174149 174 + 287728 CCCTATCCC--TGTCCTCCTCAGCAG-GGCATCTGGAAGGGCTGGGGTCAGCAGCCACGCAGGCTGTGAATATCT-GGGACTAAACGTGAGTTGGGAGGACGCAGAAGGGA---CACTCATGTGTTTCAG--GGTAGTACACACAGTCCCCC-TGCTCCCTGCACCCCACACGCAGCTGCTTCC i aotNan1.NW_018513311v1 I 177 C 0 s otoGar3.GL873658 953056 108 + 5252280 -----------------CCTCCACAGTGA-----GGATGACTCTGGAGCACC-----------CTGCAGACCTCT-------------GACTGGGGAGCACTTCGCAGCTG---CTCA---GAGGTTCAG--TCCACAGGACCCTGTC---------------------AACACAG-TGGTTTC i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1780018 180 + 4416731 CTCCATCCTAGTTTCTTCCTCACCAGTGGCACCTGGAAGGATTATAACCAGT----GCACAGGTTATCAATATTTAGAAGCTAAACATGAGTTGGAAGGAAGCAAACAGGGTCTCCCCTCTGTGCATCAGGtgaccttacatcctttgcctcttgctgctggtactcgagatacacctgcttcc i dasNov3.JH576208 C 0 I 279 e mm10.chr12 90030866 3028 - 120129022 I a score=292093.000000 s hg38.chr2_KI270774v1_alt 171355 28 + 223625 TTGTTGCCAGAGCTCAGGGAGCACAGCC s panTro5.chr2A 1468457 28 + 111504155 TTGTTGCCAGAGCTCAGGGAGCACAGCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1406708 28 + 114371477 TTGTTGCCAGAGCTCAGGGAGCACAGCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1431106 28 + 1464242 TTGTTGCCAGAGCTCAGGGAGCACAGCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1155050 28 + 81552678 TTGTTACCAGAGCTCAGGGAGCACAGCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1484416 28 + 108979918 TTGTTGCCAGAGCTCAGGGAGCACAGCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1456857 28 - 111193037 TTGTTGCCAGAGCTCAGGGAGCACAGCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1484964 28 + 3644372 TTGTTGCCAGAGCTCAGGGAGCACAGCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1439530 28 - 10304083 TTGTTGCCAGAGCTCAGGGAGCACAGcc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1517177 28 - 107702431 TTGTTGCCAGAGCTCAGGGAGCACAGCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1004995 28 - 2200435 TTGTTGCCAGAGCTCAGGGAGCACAGCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1442308 28 - 13651311 TTGTTGCCGGAGCTCAGGGAGCACAGCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1432785 28 - 108792865 TTGTTACTAGAGCTCAGGGAGCACAGCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1261506 28 - 7082604 TTGTTCCCAGGGCTCAGGGAGCACAGCT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1355521 28 + 1864846 TTGTTCCCAGAACTCAGGGAGCACAGCT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 174323 28 + 287728 TTGTTCCCAGAGCTCAGGGAGCACAGCC i aotNan1.NW_018513311v1 C 0 I 118 s otoGar3.GL873658 953164 17 + 5252280 TAGGCACTGACCCTCAG----------- i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e dasNov3.JH576208 1780198 279 + 4416731 I a score=274489.000000 s hg38.chr2_KI270774v1_alt 171383 48 + 223625 TACACATGCCT-T------------------------------------------caca---tgcccggcacatacccagcacaca---------------------------------------------cccgcaca------ s panTro5.chr2A 1468485 48 + 111504155 TACACATGCCT-T------------------------------------------caca---tgcccggcacatacccagcacaca---------------------------------------------cccgcaca------ i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1406736 48 + 114371477 TACACATGCCT-T------------------------------------------CACA---TGCCCGGCACATACCCAGCACACA---------------------------------------------CCCGCACA------ i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1431134 48 + 1464242 TACACATGCCT-T------------------------------------------caca---tgcccggcacatacccagcacaca---------------------------------------------cctgcaca------ i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1155078 135 + 81552678 CACACATGCCT-TCACACACCGGGCACACAcctgcacatgcctgcacatgcctggcaca---tgcccagcacatacccagcacacacctgcccacacatgcctagcacacacctgcacaggcctgcccacgcctgcaca------ i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1484444 48 + 108979918 CACACATGCCT-T------------------------------------------CACA---CGCCTGgcacatacccagcacatg---------------------------------------------cctgcaca------ i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1456885 48 - 111193037 CACACATGCCT-T------------------------------------------CACA---CGCCTGgcacatacccagcacatg---------------------------------------------cctgcaca------ i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1484992 48 + 3644372 CACACATGCCT-T------------------------------------------CACA---CGCCTGgcacatacccagcacatg---------------------------------------------cctgcaca------ i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1439558 40 - 10304083 cacacatgcccag------------------------------------------caca---cacccggcacatacccaacacat------------------------------------------------------------ i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1517205 48 - 107702431 CAcacacgcct-t------------------------------------------caca---cgcctggcgtatacccagcacacg---------------------------------------------cctgcaca------ i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1005023 48 - 2200435 CACATATGCCT-T------------------------------------------caca---cgcccggcacatacccaacacacg---------------------------------------------cccacaca------ i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1442336 48 - 13651311 CACACATGCCT-T------------------------------------------CACA---CGCCTGGCGcatacccagcacacg---------------------------------------------cctacaca------ i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1432813 60 - 108792865 CGAACACACCC-T------------------------------------------CCTa---cacccagcacacgcccggcacaca--------------cccagtacacac-------------------ccagcaca------ i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1261534 48 - 7082604 CGAACACATCC-T------------------------------------------CATA---CGCCCAGCACACGCCCGGcacaca---------------------------------------------tcagcaca------ i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1355549 48 + 1864846 CGAACATACCC-T------------------------------------------CATa---cacccagcacatgcccagcacaca---------------------------------------------cccacaca------ i cebCap1.NW_016107827v1 C 0 I 391 s otoGar3.GL873658 953181 56 + 5252280 CCCACAGTCTC-T------------------------------------------CACAAAGTGCACATCCCATGCTCAGC-CATC---------------------------------------------CCACCACCACCGCC i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 174351 118 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e dasNov3.JH576208 1780198 279 + 4416731 I a score=87055.000000 s hg38.chr2_KI270774v1_alt 171431 18 + 223625 tgcccggcacatgcc-------------------------------cag s panTro5.chr2A 1468533 18 + 111504155 tgcccagcacatgcc-------------------------------cag i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1406784 18 + 114371477 TGCCCAGCACATGCC-------------------------------CAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1431182 18 + 1464242 tacccaacacatgcc-------------------------------cag i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1155213 18 + 81552678 tgcccagcacatacc-------------------------------cag i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1484492 18 + 108979918 cgcccagcacatacc-------------------------------caa i rheMac8.chr13 C 0 I 11 s macFas5.chr13 1456933 18 - 111193037 cgcccagcacatacc-------------------------------caa i macFas5.chr13 C 0 I 11 s macNem1.NW_012011978v1 1485040 18 + 3644372 cgcccagcacatacc-------------------------------caa i macNem1.NW_012011978v1 C 0 I 11 s cerAty1.NW_012000820v1 1439598 17 - 10304083 -gcccagcacacacc-------------------------------cgg i cerAty1.NW_012000820v1 C 0 I 11 s chlSab2.chr14 1517253 16 - 107702431 cgcccagtacacacc-------------------------------t-- i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012103754v1 1005071 16 - 2200435 tacccagcacatgcc-------------------------------c-- i manLeu1.NW_012103754v1 C 0 I 2 s colAng1.NW_012118821v1 1442384 18 - 13651311 tgcccagcacatacc-------------------------------caa i colAng1.NW_012118821v1 C 0 I 10 s calJac3.chr14 1432873 49 - 108792865 cacccagtacacacccagcacatgcctgacacatacctggcacatacag i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1261582 18 - 7082604 cacccagtacacacc-------------------------------cag i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 953237 18 + 5252280 TTTCAGGCATCTGCT-------------------------------CCA i otoGar3.GL873658 C 0 I 131 e aotNan1.NW_018513311v1 174351 118 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1355597 391 + 1864846 I e dasNov3.JH576208 1780198 279 + 4416731 I a score=140583.000000 s hg38.chr2_KI270774v1_alt 171449 50 + 223625 cacatacctg----cacatgcct-----------gcacacacct-a-cacatgaccagcacatgc---cc s panTro5.chr2A 1468551 50 + 111504155 cacatacctg----cacacgcct-----------gcacacacct-a-cacatgcccagcacatac---cc i panTro5.chr2A C 0 I 715 s panPan2.chr2A 1406802 50 + 114371477 CACATACCTG----CACACGCCT-----------GCACACACCT-A-CACATGCCCAGCACATAC---CC i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1155231 51 + 81552678 cacacacctg----cacatgcct-----------gcacataccc-agcacatacccagcacatac---cc i nomLeu3.chr19 C 0 I 10 s rheMac8.chr13 1484521 52 + 108979918 cacacacctg---gcacataccca----------gcacacaccc-a-cacatgtccagcacacac---cc i rheMac8.chr13 I 11 I 1 s macFas5.chr13 1456962 52 - 111193037 cacacacccg---gcacataccca----------gcacacaccc-a-cacatgtccagcacacac---cc i macFas5.chr13 I 11 I 1 s macNem1.NW_012011978v1 1485069 52 + 3644372 cacacacccg---gcacataccca----------gcacataccc-a-cacatgtccagcacacac---cc i macNem1.NW_012011978v1 I 11 I 1 s cerAty1.NW_012000820v1 1439626 59 - 10304083 cacacatctgcctacacatgccca----------gcacacacccgg-cacatacccagcacacatctgcc i cerAty1.NW_012000820v1 I 11 I 1 s chlSab2.chr14 1517270 33 - 107702431 cacacgcctg----catacgccCA----------GCACACACCT-G----------------------TC i chlSab2.chr14 I 1 I 1 s manLeu1.NW_012103754v1 1005089 18 - 2200435 cacacacc-----------------------------cacacat-g----------------------cc i manLeu1.NW_012103754v1 I 2 I 1 s colAng1.NW_012118821v1 1442412 56 - 13651311 cacataccca---gcacatgccca----------gcacacacccag-cacatacacagcacacacctgcc i colAng1.NW_012118821v1 I 10 I 1 s calJac3.chr14 1432922 62 - 108792865 cacatgcccg----cacacacccggcacacaccaacacacaccc-aggacacacccagcacacac---cc i calJac3.chr14 C 0 I 12 s saiBol1.JH378218 1261600 56 - 7082604 cacacaccag----cacacacccagtac------acacatacct-ggcacatacccagcacacac---cc i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 174351 118 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1355597 391 + 1864846 I e otoGar3.GL873658 953255 131 + 5252280 I e dasNov3.JH576208 1780198 279 + 4416731 I e gorGor5.CYUI01015607v1 1431200 0 + 1464242 C a score=27530.000000 s hg38.chr2_KI270774v1_alt 171499 7 + 223625 a-cacatg s panPan2.chr2A 1406852 8 + 114371477 AGCACACG i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1155292 8 + 81552678 agcacatg i nomLeu3.chr19 I 10 C 0 s rheMac8.chr13 1484574 7 + 108979918 -gcacatg i rheMac8.chr13 I 1 C 0 s macFas5.chr13 1457015 7 - 111193037 -gcacatg i macFas5.chr13 I 1 C 0 s macNem1.NW_012011978v1 1485122 7 + 3644372 -gcacatg i macNem1.NW_012011978v1 I 1 C 0 s cerAty1.NW_012000820v1 1439686 7 - 10304083 -acacatg i cerAty1.NW_012000820v1 I 1 C 0 s chlSab2.chr14 1517304 7 - 107702431 -Acacatg i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012103754v1 1005108 7 - 2200435 -gcacatg i manLeu1.NW_012103754v1 I 1 C 0 s colAng1.NW_012118821v1 1442469 7 - 13651311 -acacatg i colAng1.NW_012118821v1 I 1 C 0 s calJac3.chr14 1432996 7 - 108792865 -acacata i calJac3.chr14 I 12 I 39 s saiBol1.JH378218 1261656 7 - 7082604 -acataca i saiBol1.JH378218 C 0 I 370 e aotNan1.NW_018513311v1 174351 118 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1355597 391 + 1864846 I e otoGar3.GL873658 953255 131 + 5252280 I e dasNov3.JH576208 1780198 279 + 4416731 I e gorGor5.CYUI01015607v1 1431200 0 + 1464242 C e panTro5.chr2A 1468601 715 + 111504155 I a score=405204.000000 s hg38.chr2_KI270774v1_alt 171506 133 + 223625 accagcacatgcccag----------cacatacccagcacacacct-gcacacgcct-gcacatacccat----------cacatgcccagcacatgcccagcacacg-cct--------gcacatgcc---cagcacatgcctagcacat--------------------------------ac--------------ccagcaca------cac---cca s panPan2.chr2A 1406860 120 + 114371477 -CCTGCACATGCCCAG----------CACATACCCAGCACACACCT-GCACATGCCT-G-------------------------------GCACATGCCCAGCACATA-CCT--------GCACATGCC---CGGcacatgcctagcacat--------------------------------acct----gcacatg-cctgcaca------cac---cta i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1155300 151 + 81552678 -gccacacatgcccag----------cacatattcagcacacacca-gcacatgcc--acacatgcccagcacatacccacacatgcccagcacatacccagcacaca-cca--------gcacatgcc---cagcacatacccagcacat--------------------------------accca---gcacaca-ccagcaca------tgc---cca i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1484581 153 + 108979918 cccagcacatacccaa----------cacatgcccagcacacacctggcacatacccaacacacacctgt-------ctacacatgcccagcacatagccagcacatgccca--------gcacacacc---cggcacatacccagcacat--------------------------------acctgtctacacatgcccagcaca------cac---ctg i rheMac8.chr13 C 0 I 1 s macFas5.chr13 1457022 153 - 111193037 cccagcacatacccaa----------cacatgcccagcacacacctggcacatacccaacacacacctgt-------ctacacatgcccagcacatagccagcacatgccca--------gcacacacc---cggcacatacccagcacac--------------------------------acctgtctacacatgcccagcaca------cac---cca i macFas5.chr13 C 0 I 1 s macNem1.NW_012011978v1 1485129 151 + 3644372 cccagcacatacccaa----------cacatgcccagcacacacctggcacatacccaacacacacctgt-------ctacacatgcccagcacatagccagcacatgccca--------g--cacacc---cggcacatacccagcacac--------------------------------acctgtctacacatgcccagcaca------cac---cca i macNem1.NW_012011978v1 C 0 I 1 s cerAty1.NW_012000820v1 1439693 162 - 10304083 cccagcacacacccgg----------cacatacctagcacacacctggcacatacccaacacacacctgt-------ctacacatgcccagcacatagccagcacatgccca--------gcacacacc---cggcacatactcagtacac--------------------------------acctgtctacacatgcccagcacacacccgcacatgcct i cerAty1.NW_012000820v1 C 0 I 1 s chlSab2.chr14 1517311 139 - 107702431 cccagcacacacccag----------cacatacctagcacacaccc-gcacataccca---------------------gcacacacct-gtacacacccagcacatgccca--------gcacaCACCTGTCTACACATGCCCAGCACAC--------------------------------ACCTGTCTACACATGCCCAGCACA------CAC---CC- i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012103754v1 1005115 135 - 2200435 cccagcacatgccca-----------cacatgcccagcacacaccc-acacatgcct----------------------gcacatgcccagcacataccaagcacatgccca--------gcacacacc---cagcacataccccgcacac--------------------------------acctgtctacacatgcccagcaca------cac---cc- i manLeu1.NW_012103754v1 C 0 I 1 s colAng1.NW_012118821v1 1442476 120 - 13651311 cccagcacacacctg-----------cacatgcccagcacacacct-gcacatgcct----------------------gcacatacccagcacacacccgtcacataccca--------acacacacc---c-acacatgcccagcacac--------------------------------a--------------cccagcaca------cac---ct- i colAng1.NW_012118821v1 C 0 I 1 s calJac3.chr14 1433042 184 - 108792865 cccagcacacacccggcacacaccaacacacacccagtacacacccagcacatgcctg---------------------acacatacctggcacata--cagcacatgcccacacacactggatacacc---cagcacacacccggcacacaccagcacacacccagcacacGCCTGGCGCATACCTG---GCACATACCCAGCACA------CGC---CCA i calJac3.chr14 I 39 C 0 s saiBol1.JH378218 1262033 140 - 7082604 accagcacacacccag----------tacacacccagcacacTCTTGGCACATGCCTG---------------------GCACATACCCAGTGCATACCCAGCACATGCCCACAGACACTGAACACGCC---TGGCACATACCTGGC------------------------------------ACCTG---gcacatacccagcata------cac---cag i saiBol1.JH378218 I 370 C 0 e aotNan1.NW_018513311v1 174351 118 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1355597 391 + 1864846 I e otoGar3.GL873658 953255 131 + 5252280 I e dasNov3.JH576208 1780198 279 + 4416731 I e gorGor5.CYUI01015607v1 1431200 0 + 1464242 C e panTro5.chr2A 1468601 715 + 111504155 I a score=60836.000000 s hg38.chr2_KI270774v1_alt 171639 21 + 223625 cacat---------gcccagcacacac------------------------------------cca s panPan2.chr2A 1406980 21 + 114371477 cacat---------gcccagcacatac------------------------------------ctg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1431200 21 + 1464242 cacat---------gcccagcacacat------------------------------------cca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1155451 21 + 81552678 cacat---------gcccagcacatac------------------------------------cca i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1484735 22 + 108979918 cacat---------acccagcacacacctg-----------------------------------g i rheMac8.chr13 I 1 C 0 s macFas5.chr13 1457176 22 - 111193037 cacat---------acccagcacacacctg-----------------------------------g i macFas5.chr13 I 1 C 0 s macNem1.NW_012011978v1 1485281 22 + 3644372 cacat---------acccagcacacacctg-----------------------------------g i macNem1.NW_012011978v1 I 1 C 0 s cerAty1.NW_012000820v1 1439856 31 - 10304083 cacat---------gcccagcacacacccgcacatgc--------------------------ccg i cerAty1.NW_012000820v1 I 1 C 0 s chlSab2.chr14 1517451 57 - 107702431 CACAT---------GCCCAGCACACACCTGTACACACCGAGCACATGCCCAGCACACACCTTTCTA i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012103754v1 1005251 21 - 2200435 cacat---------gcccagcacacac------------------------------------cca i manLeu1.NW_012103754v1 I 1 C 0 s colAng1.NW_012118821v1 1442597 31 - 13651311 cacat---------gcccagcacatacccacacatac--------------------------ccg i colAng1.NW_012118821v1 I 1 C 0 s calJac3.chr14 1433226 30 - 108792865 CACATACTGGACACACCCAGCACACGCCTG------------------------------------ i calJac3.chr14 C 0 I 12 s saiBol1.JH378218 1262173 21 - 7082604 cacat---------acccactacacaccca------------------------------------ i saiBol1.JH378218 C 0 I 12 e aotNan1.NW_018513311v1 174351 118 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1355597 391 + 1864846 I e otoGar3.GL873658 953255 131 + 5252280 I e dasNov3.JH576208 1780198 279 + 4416731 I e panTro5.chr2A 1468601 715 + 111504155 I a score=146144.000000 s hg38.chr2_KI270774v1_alt 171660 27 + 223625 cacatgcccagcacacaccca---cacatg----------- s panPan2.chr2A 1407001 26 + 114371477 cacatgcct-gcacacaccta---cacatG----------- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1431221 27 + 1464242 cacatgcccagcacacaccca---cacatg----------- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1155472 28 + 81552678 cacatgcccagcacatacccag--cacatG----------- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1484757 19 + 108979918 cacatgcccag--------ca---cacatg----------- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1457198 19 - 111193037 cacgtgcccag--------ca---cacatg----------- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1485303 27 + 3644372 catgtgcccagcacacaccca---cacatg----------- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1439887 38 - 10304083 cacatgcccagcacacaccca---cacatgcccagcacata i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1517508 27 - 107702431 CACATGCCCAGCACACACCCG---CACATG----------- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1005272 27 - 2200435 cacatgcccagcacacaccca---cacatg----------- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1442628 28 - 13651311 cacatgcccagcacatacccag--cacatg----------- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1433268 30 - 108792865 CACATGCCCAGCACATACCCAGCACACATG----------- i calJac3.chr14 I 12 C 0 s saiBol1.JH378218 1262206 30 - 7082604 cacatacccagcacatacccagcacaCATG----------- i saiBol1.JH378218 I 12 C 0 s aotNan1.NW_018513311v1 174469 30 + 287728 cacatacccagcacatacccagcacacaTG----------- i aotNan1.NW_018513311v1 I 118 C 0 e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1355597 391 + 1864846 I e otoGar3.GL873658 953255 131 + 5252280 I e dasNov3.JH576208 1780198 279 + 4416731 I e panTro5.chr2A 1468601 715 + 111504155 I a score=21000.000000 s hg38.chr2_KI270774v1_alt 171687 2 + 223625 cc s panPan2.chr2A 1407027 2 + 114371477 CC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1431248 2 + 1464242 cc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1155500 2 + 81552678 CC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1484776 2 + 108979918 cc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1457217 2 - 111193037 cc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1485330 2 + 3644372 cc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1439925 2 - 10304083 cc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1517535 2 - 107702431 CC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1005299 2 - 2200435 cc i manLeu1.NW_012103754v1 C 0 I 8066 s colAng1.NW_012118821v1 1442656 2 - 13651311 cc i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1433298 2 - 108792865 CC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1262236 2 - 7082604 CC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 174499 2 + 287728 CC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 953386 2 + 5252280 CC i otoGar3.GL873658 I 131 C 0 e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1355597 391 + 1864846 I e dasNov3.JH576208 1780198 279 + 4416731 I e panTro5.chr2A 1468601 715 + 111504155 I a score=-10517.000000 s hg38.chr2_KI270774v1_alt 171689 2 + 223625 -ca s panPan2.chr2A 1407029 2 + 114371477 -CA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1431250 2 + 1464242 -ca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1155502 1 + 81552678 -T- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1484778 2 + 108979918 -ca i rheMac8.chr13 C 0 I 10 s macFas5.chr13 1457219 2 - 111193037 -ca i macFas5.chr13 C 0 I 10 s macNem1.NW_012011978v1 1485332 2 + 3644372 -ca i macNem1.NW_012011978v1 C 0 I 10 s cerAty1.NW_012000820v1 1439927 2 - 10304083 -ca i cerAty1.NW_012000820v1 C 0 I 10 s chlSab2.chr14 1517537 2 - 107702431 -CA i chlSab2.chr14 C 0 I 2349 s colAng1.NW_012118821v1 1442658 2 - 13651311 -ca i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1433300 1 - 108792865 -C- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1262238 1 - 7082604 -C- i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 174501 1 + 287728 -C- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 953388 2 + 5252280 TT- i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1355597 391 + 1864846 I e dasNov3.JH576208 1780198 279 + 4416731 I e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e panTro5.chr2A 1468601 715 + 111504155 I a score=28997.000000 s hg38.chr2_KI270774v1_alt 171691 5 + 223625 gcaca s panPan2.chr2A 1407031 5 + 114371477 GCACA i panPan2.chr2A C 0 M 1643 s gorGor5.CYUI01015607v1 1431252 5 + 1464242 gcaca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1155503 5 + 81552678 GCACA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1484790 5 + 108979918 acaca i rheMac8.chr13 I 10 C 0 s macFas5.chr13 1457231 5 - 111193037 acaca i macFas5.chr13 I 10 C 0 s macNem1.NW_012011978v1 1485344 5 + 3644372 acaca i macNem1.NW_012011978v1 I 10 C 0 s cerAty1.NW_012000820v1 1439939 5 - 10304083 acaca i cerAty1.NW_012000820v1 I 10 C 0 s chlSab2.chr14 1519888 5 - 107702431 GCACA i chlSab2.chr14 I 2349 C 0 s colAng1.NW_012118821v1 1442660 4 - 13651311 -caca i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1433301 5 - 108792865 GCAGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1262239 5 - 7082604 GCACA i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 174502 5 + 287728 GCAGA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 953390 5 + 5252280 GCATG i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1355597 391 + 1864846 I e dasNov3.JH576208 1780198 279 + 4416731 I e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e panTro5.chr2A 1468601 715 + 111504155 I a score=29527.000000 s hg38.chr2_KI270774v1_alt 171696 8 + 223625 ---CACCTTGC s gorGor5.CYUI01015607v1 1431257 8 + 1464242 ---CACCTTGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1155508 8 + 81552678 ---CGCCTTGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1484795 8 + 108979918 ---CACCTTGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1457236 8 - 111193037 ---CACCTTGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1485349 8 + 3644372 ---CACCTTGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1439944 8 - 10304083 ---CACCTTGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1519893 8 - 107702431 ---CACCTTGC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1442664 8 - 13651311 ---CACCTTGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1433306 8 - 108792865 ---CGCTTTTA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1262244 8 - 7082604 ---CGCCTTTA i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 174507 8 + 287728 ---CGCCTTTA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 953395 9 + 5252280 TGCCACTCC-- i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1355597 391 + 1864846 I e dasNov3.JH576208 1780198 279 + 4416731 I e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e panPan2.chr2A 1407036 1643 + 114371477 M e panTro5.chr2A 1468601 715 + 111504155 I a score=632832.000000 s hg38.chr2_KI270774v1_alt 171704 109 + 223625 CTCTGGCTGGGACCCCCTTTGCTGCTGGCCCTGCTCAGGCCCCACAGCTTGATCTCCTCATGTTCCCACT---GCT-GACTTCCCCAAGCTAACTGTGCCACAGAGTGGGGGA s gorGor5.CYUI01015607v1 1431265 109 + 1464242 CTCTGGCTGGGACCCCCTTTGCTGCTGGCCCTGCTCAGGCCCCACAGCTTGATCTCCTCATGTTCCCACT---GCT-GACTTCCCCAAGCTAACTGTGCCACAGAGTGGGGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1155516 109 + 81552678 CTCTGGCTGGGACCCCCTTTGCTGCTGGCCCTGCTCAGGCCCCATAGCTTGATCTCCTCATGTTCCCATT---GCT-AACTTCCCTGAGCTAACTGCGCCAGAGAGCAGGCGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1484803 109 + 108979918 CTCTGGCTGGGACCCCCTTTGCTGCTGGCCCTGCTCAGGCCCCACAGCTTGACCTCCTAATGTTGCCACT---GCT-GACTTCCCTGAGCTAACTGCGGCAGAGAGCAGGCGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1457244 109 - 111193037 CTCTGGCTGGGACCCCCTTTGCTGCTGGCCCTGCTCAGGCCCCACAGCTTGACCTCCTCATGTTGCCACT---GCT-GACTTCCCTGAGCTAACTGCGCCAGAGAGCAGGCGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1485357 109 + 3644372 CTCTGGCTGGGACCCCCTTTGCTGCTGGCCCTGCTCAGGCCCCACAGCTTGACCTCCTCATGTTGCCACT---GCT-GACTTCCCTGAGCTAACTGCGCCAGAGAGCAGGCGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1439952 109 - 10304083 CTCTGGCTGGGACCCCCTTTGCTGCTGGCCCTGCTCAGGCCCCACAGCTTGACCTCCTCATGTTGCCACT---GCT-GACTTCCCTGAGCTAACTGCGCCAGAGAGCGGGCGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1519901 109 - 107702431 CTCTGGCTGGGACCCCCTTTGCTGCTGGCCCTGCTCAGGCCCCACAGCTTGACCTCCTCGTGTTGCCACT---GCT-GACTTCCCTGAGCTAACTGCACCAGAGAGCAGGCGA i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1442672 109 - 13651311 CTCTGGCTGGGACCCCCTTTGCTGCTGGCCCTGCTCAGGCCCCACAGCTTGACCTCCTCATGTTGCCACT---GCT-GACTTCCCTGAGCTAACTGCACCAGAGAGCGGGCGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1433314 107 - 108792865 CTCTGGCTGGGGCCCCCTTTGCTACCAACCCTGCTCAGG-CCCACAGTTTGATCTCCTCACATACCCGCT---GCT-GGCTTCCCG-AGCTAACAGCATCAGAGAGTGAGCGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1262252 99 - 7082604 CTCTGGCTGGGACCCCCTTTGCTG-CGGCCCTGCTCAGG-CCCACAGTTTGATCTCCTCACGTTCCCGCT---GCT-GGTCTCCC--------CAGCATCAGAGAGTGGGCGA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1355988 107 + 1864846 CTCTGGCTGGGACTCCCTTTGCTGCCGCCCCTGCTGAGG-CCCACAGTTTGATCTCCTCACGTTCCCGCT---GCT-GGCTTCCCC-CGCTAATGGCATCAGAGAGTGGGTGa i cebCap1.NW_016107827v1 I 391 C 0 s aotNan1.NW_018513311v1 174515 107 + 287728 CTCTGGCTGGGGCCCCCTTTGCTGCCGGCCCTGCTCAGG-CCCACAGTTTGATCTCCTCACGTTCCTGCC---ACT-AGCTTCCCC-AGCTAACGGCATCAGAGAGTGGGTGa i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 953404 89 + 5252280 CTCTGGCCAGGATGCCC-CTGCTATTGACCCAGCCTAAC-------------CCTCCTCAAGGCCCTACTTAGGCGAGACTATCCCAAG---ACAGCACCTGAATG------- i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e dasNov3.JH576208 1780198 279 + 4416731 I e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e panPan2.chr2A 1407036 1643 + 114371477 M e panTro5.chr2A 1468601 715 + 111504155 I a score=1292112.000000 s hg38.chr2_KI270774v1_alt 171813 235 + 223625 CCCCCTCCCGGCTCTCACAACCCCCACCTTCCTCTGCTTC----------ACTTTTCACCAACTGAAATATGGCCAAAGGCA------------AAAACCCATG-TTcccactggc---ctgtgggtc-cccccata--gatcgtaagc-ccaggagg--aagggctgtgtttcagggctgtgat----ca---ctagcacccagaaccgtcgactggcacagaacaggcacttagggaaCCCTCACtgaatgaat------------------------------------------------ga-atgaatgaatgaatg-a s gorGor5.CYUI01015607v1 1431374 254 + 1464242 CCCCCTCCCG-CTCTCACAACCCCCACCTTCCTCTGCTTC----------ACTTTTCACCAACTGAAATATGGCCAAAGGCG------------AAAACCCATG-TTCCCACTGGC---CTGTGGGtc-cccccata--gatcgtaagc-ccaggagg--aagggctgtgtttcagggctgtgat----ca---ctagcacccagaaccgtcgactggcacagaacaggcacttaGGGAACCCTCACtgaatgaataaacg----------------------------aatgaatgaatgaatga-atgaatgaatgaatg-a i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1155625 235 + 81552678 CCCCTTCCCGGCTCTCACAACCCCCACCTTCCTCTGCTTC----------ACTTTTCACCAACTGAAATGTGGCCAAAGGCA------------AAAACCCACA-TTCCCACTGGC---CTGCGGgtc-tccccgta--gatcataaac-cccagagg--aagggctgtgtttcagggctggggt----cg---ttagcacccagaaccgtcgactggcacagaacagacacttaGGGAACCCTCACtgaatgaat------------------------------------------------ga-atgagtgaatgaatg-a i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1484912 283 + 108979918 CCCCATCCCAGCCCTCACAACCCCCACCTTTGTCTGCTCT----------ACTTTTCACCAACTGAAATGTGGCCAAAGGTG------------AAAATCCACG-TTcccactggc---ctgtgggtc--ccccaaa--gatcataagc-ccaggagg--aagggctgtgtttcagggctgtggt----ca---ctagcacccagagctgttgactggcacagaacaggcacttagggaaccctcactggatggatggagggatggagggagggagggagggagggagggatggatggatgaatggaatgaatgaatgaatg-a i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1457353 266 - 111193037 CCCCATCCCAGCCCTCACAACCCCCACCTTTGTCTGCTCT----------ACTTTTCACCAATTGAAATGTGGCCAAAGGTG------------AAAATCCACG-TTcccactggc---ctgtgggtc--ccccaaa--gatcataagc-ccaggagg--aagggctgtgtttcagggctgtggt----ca---ctagcacccagagctgttgactggcacagaacaggcacttagggaaccctcactgaatggatggatggatggatggatg----------------gatggatggatggatgg-atgaatgaatgaatg-a i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1485466 274 + 3644372 CCCCATCCCAGCCCTCACAACCCCCACCTTTGTCTGCTCT----------ACTTTTCACCAATTGAAATGTGGCCAAAGGTG------------AAAATCCACG-TTcccactggc---ctgtgggtc--ccccaaa--gatcataagc-ccaggagg--aagggctgtgtttcagggctgtggt----ca---ctagcacccagagctattgactggcacagaacaggcacttagggaaccctcactgaatgaatgGGTGGGtggatggatg--------gatggatggatggatggatggatgg-atggatggatggatg-g i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1440061 266 - 10304083 CCCCATCCCGGCCCTCACAACCCTCACCTTTGTCTGCTCT----------ACTTTTCACCAACTGAAATGTGGCCAAAGGTG------------AAAATCCACG-TTcccactggc---ctgtgggtc--ccccaaa--gatcataagc-ccaggagg--aagagctgtgtttcagggctgtggt----ca---ctagcacccagaactgttgactggcacagaacaggcgcttagggaaccctcactgaattgatggatggatggatggatg----------------gatggatggatggatgg-atggatgaatgaatg-a i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520010 266 - 107702431 CCCCATCCCGGCCCTCACAACCCCCACCTTTGTCTGCTCT----------ACTTTTCACCAACTGAAATGTGGCCAAAGGCG------------AAAATCCACG-TTCCCCCTGGC---CTATGGGtc--ccccaaa--gatcataagc-ccaggagg--aagggctgtgtttcagggctgtggt----cg---ctagcaccccaaaccgttgaccggcacagaacaggtgcttagggaaccctcactgaatgaatggatggatggatggatg----------------gatggatggatggatgg-atggatggatgAATG-A i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1442781 250 - 13651311 CCCCATCTCGGCCCTCACAACCCCCACCTTTGTCTGCTCT----------ACTTTTCACCAACTGAAATGTGGCCAAAGGCA------------AAAATCCACG-TTcccactggc---ctgtgggtc--ccccaaa--gatcataagc-ccaggagg--aagggctgtgtttcagggctgtggt----cg---ccagcacccagaaccattgactggcacagaacaggcgcttagggaaCCCTCACtgaatgaatg--------------------------------aatggatgaatgaatga-atgaatgaatgaatg-a i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1433421 244 - 108792865 CCCCCTCCCAGCTCTAACAACCCCTGCCCTCCTCTGCTTT----------ACTTCTCACCAACTGAAATGCAGCCAAAGGCA------------AAAACCCACA-TTCCCATTGGC---CTGTGGGTC--CCCCGTA--AAACAGAAGT-CCAGGAGG--AAGGGCTGTGTCTCAGGGCTGTGAGGCTATG---GTTGCACCCAGAACCGTTGACTGGCACAGAACA-GCACTTGCAGAATGCTCACtgagtgagt----------------------------------------gagtgaatga-atgaatgaatgaatg-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1262351 236 - 7082604 CCCCCTCCCGGCTCTAACAACCCCTACCTTCCTCTGCTTT----------ACTTTTCACCAGCTGAAATGTGGCCAAAAGCA------------AAAACCCACA-TTCCCATTGGC---CTGTGGGT---CCCCGTG--AAACCTAAGC-TCAGGAGG--AGGGGCCATGTTTCAGGGCCGTGAGGCTGTG---GTTGCACCCAGAACCGCTGACTGGCACAGAACAGGCACTTACAGAATGCTCACTCAGtgag------------------------------------------------tga-atgaatgaatgaatg-- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1356095 240 + 1864846 ccccctcctggctctaacaatccctaccttcctctgcttt----------acttttcaccaactgaaatgtggccaaaggca------------aaagcccaca-ttcccattggc---ctgtgggtc--ccccgta--aaacataagc-ccgggagg--aggggctgtgtttcagggctgtgaggctgtg---gttgcccccagaaccgctgactggcacagaacaggcacttacagaatgctcactcagtgag--------------------------------------------cgaatga-atgaa-gaatgaatg-- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 174622 238 + 287728 ccccctctcggctctaacaacccccaccttcctctgcttc----------acttctcaccaactgaaatgtggccaaaggca------------aaaacccaca-ttcccattggc---ctgtgggtc--ccctgta--aaacataagc-ccaggagg--aagggctatgtttcagggctgtgaggctgtg---gttgcacccagaaccgttgactggcacaaaacaggcactcacagaatgctcactgagtgag------------------------------------------------tga-atgaatgaatgaatga- i aotNan1.NW_018513311v1 C 0 I 103 s otoGar3.GL873658 953493 197 + 5252280 CCCCCTTCCTGCTCCAGCTGCTCCCGCCTGC--------------------CTTTTCCCCAACTAAAGTGTGATGAAAGGTACTGAAATGTGTGAAAATCCAC--TTCCCATCAGC---CTGTCTCCA--CCAGGCA--GAGCGTAAGCTCCGGGAGG--GTGTCCTACTCCTC---------------AG---CCCACACCCAGAGCTGCC-ACTGGCACAGAAGGGGCACCT-GGGAGAGCTCAGG---------------------------------------------------------------------------- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1780477 242 + 4416731 ccccacaccagccttgccttcccttcccttactctactttttgccacagcacgtatcactacttgaaata---ctataccta------------caagcccacacttttcatttgctcattgttggcctcccccaaattgaatgaaagctccatggggacaaaagtttggttttgctgctgcctg----cagtcccagcacgtagaaaggt-gactgccacagaatgggc---------atgcttactgaatacg------------------------------------------------tga-ctgagtgaGCAAC---- i dasNov3.JH576208 I 279 C 0 e mm10.chr12 90030866 3028 - 120129022 I e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e panPan2.chr2A 1407036 1643 + 114371477 M e panTro5.chr2A 1468601 715 + 111504155 I a score=11736.000000 s hg38.chr2_KI270774v1_alt 172048 2 + 223625 at s gorGor5.CYUI01015607v1 1431628 2 + 1464242 at i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1155860 2 + 81552678 at i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1485195 2 + 108979918 at i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1457619 2 - 111193037 at i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1485740 2 + 3644372 at i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1440327 2 - 10304083 at i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520276 2 - 107702431 AT i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1443031 2 - 13651311 at i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1433665 2 - 108792865 at i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1262587 2 - 7082604 at i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1356335 2 + 1864846 at i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 953690 2 + 5252280 AG i otoGar3.GL873658 C 0 I 1 e aotNan1.NW_018513311v1 174860 103 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e dasNov3.JH576208 1780719 0 + 4416731 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e panPan2.chr2A 1407036 1643 + 114371477 M e panTro5.chr2A 1468601 715 + 111504155 I a score=25584.000000 s hg38.chr2_KI270774v1_alt 172050 4 + 223625 gaat s gorGor5.CYUI01015607v1 1431630 4 + 1464242 gaat i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1155862 4 + 81552678 gaat i nomLeu3.chr19 C 0 I 973 s rheMac8.chr13 1485197 4 + 108979918 gaat i rheMac8.chr13 C 0 I 16 s macFas5.chr13 1457621 4 - 111193037 gaat i macFas5.chr13 C 0 I 16 s macNem1.NW_012011978v1 1485742 4 + 3644372 gAAT i macNem1.NW_012011978v1 C 0 I 16 s cerAty1.NW_012000820v1 1440329 4 - 10304083 gaat i cerAty1.NW_012000820v1 C 0 I 16 s chlSab2.chr14 1520278 4 - 107702431 GAAT i chlSab2.chr14 C 0 I 8 s colAng1.NW_012118821v1 1443033 4 - 13651311 gaat i colAng1.NW_012118821v1 C 0 I 5 s calJac3.chr14 1433667 4 - 108792865 gaat i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1262589 4 - 7082604 gaat i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1356337 4 + 1864846 gaat i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 174963 4 + 287728 gaat i aotNan1.NW_018513311v1 I 103 C 0 s otoGar3.GL873658 953693 3 + 5252280 GAG- i otoGar3.GL873658 I 1 I 2 e mm10.chr12 90030866 3028 - 120129022 I e dasNov3.JH576208 1780719 0 + 4416731 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e panPan2.chr2A 1407036 1643 + 114371477 M e panTro5.chr2A 1468601 715 + 111504155 I a score=25050.000000 s hg38.chr2_KI270774v1_alt 172054 5 + 223625 gTTTG s gorGor5.CYUI01015607v1 1431634 5 + 1464242 gTTTG i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1485217 5 + 108979918 GTTTG i rheMac8.chr13 I 16 C 0 s macFas5.chr13 1457641 5 - 111193037 gTTTG i macFas5.chr13 I 16 C 0 s macNem1.NW_012011978v1 1485762 5 + 3644372 GTTTG i macNem1.NW_012011978v1 I 16 C 0 s cerAty1.NW_012000820v1 1440349 5 - 10304083 gTTTG i cerAty1.NW_012000820v1 I 16 C 0 s chlSab2.chr14 1520290 5 - 107702431 GTTTG i chlSab2.chr14 I 8 C 0 s colAng1.NW_012118821v1 1443042 5 - 13651311 GTTTG i colAng1.NW_012118821v1 I 5 C 0 s calJac3.chr14 1433671 5 - 108792865 gTTTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1262593 5 - 7082604 gTTTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1356341 5 + 1864846 gTTTG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 174967 5 + 287728 gTTTG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 953698 3 + 5252280 GCA-- i otoGar3.GL873658 I 2 C 0 e mm10.chr12 90030866 3028 - 120129022 I e dasNov3.JH576208 1780719 0 + 4416731 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e nomLeu3.chr19 1155866 973 + 81552678 I e panPan2.chr2A 1407036 1643 + 114371477 M e panTro5.chr2A 1468601 715 + 111504155 I a score=381192.000000 s hg38.chr2_KI270774v1_alt 172059 69 + 223625 GGCAAATAA-ACGCTGACAAGGACAGAAGGGCCTAGCGGGAAGGGAAC-AGGAGT--AAGACCAGCGCACAGC s gorGor5.CYUI01015607v1 1431639 69 + 1464242 GGCAAATAA-ACGCTGACAAGGACAGAAGGGCCTAGCGGGAAGGGAAC-AGGAGT--AAGACCAGCACACAGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1156839 69 + 81552678 GGCGAATAA-ACGCTGACAAGGACAGAAGGGCCTAGTGGGAAGGGAAC-AGGAGT--AAGACCAGCACACAGC i nomLeu3.chr19 I 973 C 0 s rheMac8.chr13 1485222 69 + 108979918 GGCAAATAA-ACGCTGACGAGGACAGAAGGGCCTGGTGGGAAGGGAAC-AGGAGT--AAGACCAGCACACAGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1457646 69 - 111193037 GGCAAATAA-ACGCTGACGAGGACAGAAGGGCCTGGTAGGAAGGGAAC-AGGAGT--AAGATCAGCACACAGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1485767 69 + 3644372 GGCAAATAA-ACGCTGACGAGGACAGAAGGGCCTGGTGGGAAGGGAAC-AGGAGT--AAGACCAGCACACAGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1440354 69 - 10304083 GGCAAATAA-ACACTGACAAGGACAGAAGGGCCTGGTGGGAAGGGAAC-AGGAGT--AAGACCAGCACACAGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520295 69 - 107702431 GGCAAATAA-ACACTGACAAGGACAGAAGGGCCTGGTGGGAAGGGAAC-AGGAGT--AAGACCAGCACACAGC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1443047 69 - 13651311 GGCAAATAA-ACGCTGACAAGGACAGAAGGGCCTGGTGGGAAGGGAAC-AGGAGT--GAGACCAGCACACAGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1433676 69 - 108792865 GGCAAATAA-ACACTGACAAGCAAAGAAGGG-CTCGTGGGAAGGGAACAAGGAGT--AAGACCAGCACGCAGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1262598 54 - 7082604 GGCAAATCA-ACACTGACAAGCAAAGACGGGCCTCGTGGGAAGGGAACAAGG------------------AGC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1356346 70 + 1864846 GGCAAATCA-ACACTGACAAGCAAAGACGGACCTCATGGGAAGGGAACAAGGAGT--AAGACCAGCAAGCAGC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 174972 70 + 287728 GGCAAATAA-ACACCGACAAGCAAAGATGGGCCTCGTGGGAAGGGAACAATGAGT--AAGACCGGCACGCAGC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 953701 63 + 5252280 GGCAAGTGACCCCCCTCCCAGGAATGACAGTCTTAGAAGGCAGGGGTC-AAGA---------CACCAGGCACT i otoGar3.GL873658 C 0 I 2 s dasNov3.JH576208 1780719 58 + 4416731 ----------ACTCGGATAAGGAAAGAA---CTTAGAAAAGAAGGAAA-ATGGTTTCATGACAAGTGTGCTG- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e panPan2.chr2A 1407036 1643 + 114371477 M e panTro5.chr2A 1468601 715 + 111504155 I a score=237189.000000 s hg38.chr2_KI270774v1_alt 172128 32 + 223625 CCGACTTGTGTTCAGAAGACCTGGGATTGGAC s panTro5.chr2A 1469316 32 + 111504155 CCGACTTGTGTTCAGAAGACCTGGGATTGGAC i panTro5.chr2A I 715 I 151 s gorGor5.CYUI01015607v1 1431708 32 + 1464242 CCGACTTGTGTTCAGAAGACCTGGGATTGGAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1156908 32 + 81552678 CAGACTTGTGTTCAGAAGACCTGGGATTGGAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1485291 32 + 108979918 CTGACTTGTGTTCCAAAGACTTGGGTTTGGAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1457715 32 - 111193037 CCGACTTGTGTTCCAAAGACTTGGGTTTGGAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1485836 32 + 3644372 CCGACTTGTGTTCCAAAGACTTGGGTTTGGAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1440423 32 - 10304083 CCGACTTGTGTTCCAAAGACTTGGGTTTGGAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520364 32 - 107702431 CCGACTTGTGTTCCGAAGACTTGGGTTTGGAC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1443116 32 - 13651311 CCGACTTGTGTTCCAAAGACTTGAGTTTGGAC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1433745 32 - 108792865 CCAACTCGTGTTCAGAAGACCTGGGCTTGGGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1262652 32 - 7082604 CCGAGTCCTGTTCAGAAGATTTGGGCTTGGGC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1356416 32 + 1864846 CCAGCTTGTGATCAGAAGACCTGGGCTTGGGC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 175042 32 + 287728 CTGACTCGTGTTCAGAAGACCTGGGCCTGGGC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 953766 30 + 5252280 TCGGCTGGAGCTCAG-AGACCTG-GTTTGAGC i otoGar3.GL873658 I 2 C 0 s dasNov3.JH576208 1780777 30 + 4416731 --GGCTTTCACTCAGAAGACTTGGCTTTGGTT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e panPan2.chr2A 1407036 1643 + 114371477 M a score=155490.000000 s hg38.chr2_KI270774v1_alt 172160 24 + 223625 CTGAGGAGTTCAATTTT-GGATGAA s gorGor5.CYUI01015607v1 1431740 24 + 1464242 CTGAGGAGTTCAATTTT-GGATGAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1156940 24 + 81552678 CTGAGGAGTTCAATTTT-GGATGAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1485323 24 + 108979918 CTGAGGAGTTCAATTTT-GGATGAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1457747 24 - 111193037 CTGAGGAGTTCAATTTT-GGATGAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1485868 24 + 3644372 CTGAGGAGTTCAATTTT-GGATGAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1440455 24 - 10304083 CTGAGGAGTTCAATTTT-GGATGAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520396 24 - 107702431 CTGAGGAGTTCAATTTT-GGATGAA i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1443148 24 - 13651311 CTGAGgagttcaatttt-ggatgaa i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1433777 21 - 108792865 CT---GTGCTCAATTTT-GGATGAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1262684 21 - 7082604 CT---GAGTTGAATTTT-GTATGAA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1356448 21 + 1864846 CT---GAGTTCAATTTT-GGATGAA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 175074 21 + 287728 CT---GAGTTCAATTCT-GGATGAA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 953796 24 + 5252280 ATGAGAAGCCCAGGTTT-GAAGGAA i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1780807 25 + 4416731 CTGAGAAGTCCATCTTTCTGATGAA i dasNov3.JH576208 C 0 I 170 e mm10.chr12 90030866 3028 - 120129022 I e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e panPan2.chr2A 1407036 1643 + 114371477 M e panTro5.chr2A 1469348 151 + 111504155 I a score=69146.000000 s hg38.chr2_KI270774v1_alt 172184 10 + 223625 TCTCTTAATT s gorGor5.CYUI01015607v1 1431764 10 + 1464242 TCTCTTAATT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1156964 10 + 81552678 TCAGTTAATT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1485347 10 + 108979918 TTTCTTAATT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1457771 10 - 111193037 TTTCTTAATT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1485892 10 + 3644372 TTTCTTAATT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1440479 10 - 10304083 TTTCTTAATT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520420 10 - 107702431 TTTCTTAATT i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1443172 10 - 13651311 tttcttaatt i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1433798 10 - 108792865 TCTCTTAATT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1262705 10 - 7082604 TCTCTTAATT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1356469 10 + 1864846 TCTCTTAATT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 175095 10 + 287728 CCTCTTAATT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 953820 10 + 5252280 TCTCTTAACT i otoGar3.GL873658 C 0 I 115 e mm10.chr12 90030866 3028 - 120129022 I e dasNov3.JH576208 1780832 170 + 4416731 I e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e panPan2.chr2A 1407036 1643 + 114371477 M e panTro5.chr2A 1469348 151 + 111504155 I a score=348551.000000 s hg38.chr2_KI270774v1_alt 172194 65 + 223625 AACCTGTGGGGTTCCCAGTTCCTCCCCTGAGCGCCCAGGACAGTAGAGTCAACCTCACGTTTGAG s gorGor5.CYUI01015607v1 1431774 65 + 1464242 AACCTGTGTGGTTCCCAGTTCCTCCCCTGAGCGCCCAGGACAGTAGAGTCAACCTCACGTTTGAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1156974 64 + 81552678 AACCTGTATGTTTCCCAGTTCCTCCCCTGAGCACCCAGGACAGTAGAGTCAACCTCAT-TTTGAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1485357 65 + 108979918 AACATGTGTGGTTCCCAGTTCCTTCCCTGAGTGCCCAGGACAGTAGAGTCAACCTCACTTTTGAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1457781 65 - 111193037 AACCTGTGTGGTTCCCAGTTCCTTCCCTGAGTGCCCAGGACAGTAGAGTCAACCTCACGTTTGAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1485902 65 + 3644372 AACCTGTGTGGTTCCCAGTTCCTTCCCTGAGTGCCTAGGACAGTAGAGTCAACCTCACGTTTGAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1440489 65 - 10304083 AACCTGTGTGGTTCCCAGTTCCTTCCCTGAGTGCCCAGGACAGTAGAGTCAGCCTCACGTTTGAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520430 65 - 107702431 AACCTGTGTGGTTCCCAGTTCCTTCCCTGAGTGCCCAGGACAGTAGAGTCAACCTCACATTTGAG i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1443182 65 - 13651311 aacctgtgtggttcccagttcctttcctgagtgcccaGGACAGTAGAGTCAACCTCACGTTTCAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1433808 58 - 108792865 AA---GTGCA-TTCTCACT--TTCTCCCGAGTGCC-AGGACAGTAGAGTCAACCTCACGTTTGAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1262715 60 - 7082604 AACCTGTGTG-TTCCCACTGCCCCGCCTGAGTGCC-AGGAC---TCAGTCAACCTCACGTTTGAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1356479 63 + 1864846 AACCTGTGTG-TTCCCACTTCCCCCCCTGAGTGCC-AGGACAGTAGAGTCAACCTCACGTTTGGG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 175105 63 + 287728 AACCTGTGTG-TTCCCACTTCCTCCCCTGAGTGCC-CGGACAGTAGAGTCAACCTCACGTCTGAG i aotNan1.NW_018513311v1 C 0 I 54 e mm10.chr12 90030866 3028 - 120129022 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e panPan2.chr2A 1407036 1643 + 114371477 M e panTro5.chr2A 1469348 151 + 111504155 I a score=108909.000000 s hg38.chr2_KI270774v1_alt 172259 21 + 223625 CGTTGGGGACGCAAACACGAG s gorGor5.CYUI01015607v1 1431839 21 + 1464242 CGTTGGGGACGCAAACACGAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157038 21 + 81552678 TGTCGGGGACACACACACAAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1485422 21 + 108979918 TGTTGGGGACGCACACACGAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1457846 21 - 111193037 TGTTGGGGACGCACACATGAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1485967 21 + 3644372 TGTTGGGGACGCACACACGAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1440554 21 - 10304083 TGTTGGGGACGCACACACGAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520495 21 - 107702431 TGTTGGGGACGCACACACGAG i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1443247 21 - 13651311 TGTTGGGGACGCACACACGAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1433866 21 - 108792865 TGTTGGAGTCGCACACATGAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1262775 21 - 7082604 TGTTGGGGTCGCACACATGAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1356542 21 + 1864846 TGTTGGAGTCGCACACGTGAG i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e panPan2.chr2A 1407036 1643 + 114371477 M e panTro5.chr2A 1469348 151 + 111504155 I a score=83144.000000 s hg38.chr2_KI270774v1_alt 172280 19 + 223625 AGTGCTTGGTGTGAGCACA s gorGor5.CYUI01015607v1 1431860 19 + 1464242 ACTGCTTGGTGTGAGCACA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157059 19 + 81552678 AGTGCTTGGTGTAAGCACA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1485443 19 + 108979918 AGTGCTTGGTGTGAGCACA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1457867 19 - 111193037 AGTGCTTGGTGTGAGCACA i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1440575 19 - 10304083 AGTGCTTGGTGTGAGCACA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520516 19 - 107702431 AGTGCCTGGTGTGAGCACA i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1443268 19 - 13651311 AGTGCTTGGTGTGAGCACA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1433887 19 - 108792865 AGTGTGTGGTGTGAGCACA i calJac3.chr14 C 0 I 4 s saiBol1.JH378218 1262796 19 - 7082604 AGTCTGTGGTGTGAGCACT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1356563 19 + 1864846 AGTGTGTGGTGTGAGCACA i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e macNem1.NW_012011978v1 1485988 0 + 3644372 C e panPan2.chr2A 1407036 1643 + 114371477 M e panTro5.chr2A 1469348 151 + 111504155 I a score=28747.000000 s hg38.chr2_KI270774v1_alt 172299 7 + 223625 CAGGAGG s gorGor5.CYUI01015607v1 1431879 7 + 1464242 CAGGAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157078 7 + 81552678 CAGGAGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1485462 7 + 108979918 CAGGAGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1457886 7 - 111193037 CAGGAGG i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1440594 7 - 10304083 CAGGAGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520535 7 - 107702431 CAGGAGG i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1443287 7 - 13651311 CAGGAGG i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1262815 7 - 7082604 CGGGAGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1356582 7 + 1864846 CGGGAGG i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e macNem1.NW_012011978v1 1485988 0 + 3644372 C e panPan2.chr2A 1407036 1643 + 114371477 M e panTro5.chr2A 1469348 151 + 111504155 I a score=5005.000000 s hg38.chr2_KI270774v1_alt 172306 1 + 223625 A s panPan2.chr2A 1408739 1 + 114371477 A i panPan2.chr2A M 1643 C 0 s gorGor5.CYUI01015607v1 1431886 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157085 1 + 81552678 A i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1485469 1 + 108979918 A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1457893 1 - 111193037 A i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1440601 1 - 10304083 A i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520542 1 - 107702431 A i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1443294 1 - 13651311 A i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1262822 1 - 7082604 A i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1356589 1 + 1864846 A i cebCap1.NW_016107827v1 C 0 I 33 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e macNem1.NW_012011978v1 1485988 0 + 3644372 C e panTro5.chr2A 1469348 151 + 111504155 I a score=3555.000000 s hg38.chr2_KI270774v1_alt 172307 2 + 223625 GT- s panPan2.chr2A 1408740 2 + 114371477 GT- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1431887 2 + 1464242 GT- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157086 2 + 81552678 GT- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1485470 2 + 108979918 GT- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1457894 2 - 111193037 GT- i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1440602 2 - 10304083 GT- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520543 2 - 107702431 GT- i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1443295 2 - 13651311 GT- i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1262823 2 - 7082604 -TT i saiBol1.JH378218 C 0 I 31 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e macNem1.NW_012011978v1 1485988 0 + 3644372 C e panTro5.chr2A 1469348 151 + 111504155 I a score=17266.000000 s hg38.chr2_KI270774v1_alt 172309 6 + 223625 CACGAC s panPan2.chr2A 1408742 6 + 114371477 CACGAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1431889 6 + 1464242 CGCGAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157088 6 + 81552678 CATGAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1485472 6 + 108979918 CATGAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1457896 6 - 111193037 CATGAC i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1440604 6 - 10304083 CATGAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520545 6 - 107702431 CACGAC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1443297 6 - 13651311 CATGAC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e macNem1.NW_012011978v1 1485988 0 + 3644372 C e panTro5.chr2A 1469348 151 + 111504155 I a score=89877.000000 s hg38.chr2_KI270774v1_alt 172315 24 + 223625 AGAGCAGTGTAAGAGCCGCCACGT s panTro5.chr2A 1469499 24 + 111504155 AGAGCAGTGTAAGAGCTGCCACGA i panTro5.chr2A I 151 C 0 s panPan2.chr2A 1408748 24 + 114371477 ACAGCAGTGTAAGAGCTGCCACGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1431895 24 + 1464242 AGAGCAGTGTAAGAGCCGCCACGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157094 24 + 81552678 ACAGCATTGTAAGAGCTGCCACGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1485478 24 + 108979918 ACAGCAGTGTAAGAGCTGCCACGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1457902 24 - 111193037 ACAGCAGTGTAAGAGCTGCCACGC i macFas5.chr13 C 0 T 44 s cerAty1.NW_012000820v1 1440610 24 - 10304083 ACAGCAGTGTAAGAGCTGCCACGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520551 24 - 107702431 ACAGCAGTGTAAGAGCTGCCACGC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1443303 24 - 13651311 ACAGCAGTGTAAGAGCTGCCACGC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e macNem1.NW_012011978v1 1485988 0 + 3644372 C a score=5910.000000 s hg38.chr2_KI270774v1_alt 172339 6 + 223625 GGGTCC s panTro5.chr2A 1469523 6 + 111504155 GGGTCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1408772 6 + 114371477 GGGTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1431919 6 + 1464242 GGGTCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157118 6 + 81552678 GGGTCC i nomLeu3.chr19 C 0 C 0 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1485988 0 + 3644372 C e macFas5.chr13 1457926 44 - 111193037 T e rheMac8.chr13 1485502 0 + 108979918 C a score=29463.000000 s hg38.chr2_KI270774v1_alt 172345 22 + 223625 CACACAGGGGGAGTCACGACAC s panTro5.chr2A 1469529 22 + 111504155 CACACAGGAGGAGTCACGACAC i panTro5.chr2A C 0 T 50 s panPan2.chr2A 1408778 22 + 114371477 CACACAGGAGGAGTCACGACAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1431925 22 + 1464242 CACACAGGAGGAGTCACGACAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157124 22 + 81552678 TACACAGGAGGAGTCATGACAC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1457882 22 - 111193037 CACACAGGAGGAGTCATGACAC i macFas5.chr13 T 44 C 0 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1485988 0 + 3644372 C e rheMac8.chr13 1485502 0 + 108979918 C a score=34868.000000 s hg38.chr2_KI270774v1_alt 172367 29 + 223625 AGCAGTGTAAGAGCCGCCACGA--GGGTCCC s panTro5.chr2A 1469501 29 + 111504155 AGCAGTGTAAGAGCTGCCACGA--GGGTCCC i panTro5.chr2A T 50 C 0 s panPan2.chr2A 1408800 31 + 114371477 AGCAGTGTAAGAGCTGCCACACATGGGTCCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1431947 29 + 1464242 AGCAGTGTAAGAGCCGCCACGT--GGGTCCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157146 29 + 81552678 AGCATTGTAAGAGCTGCCACGT--GGGTCCC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1457904 29 - 111193037 AGCAGTGTAAGAGCTGCCACGC--GGGTCCC i macFas5.chr13 C 0 T 50 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1485988 0 + 3644372 C e rheMac8.chr13 1485502 0 + 108979918 C a score=26996.000000 s hg38.chr2_KI270774v1_alt 172396 21 + 223625 ACACAGGGGGAGTCGCGACAC s panTro5.chr2A 1469530 21 + 111504155 ACACAGGAGGAGTCACGACAC i panTro5.chr2A C 0 T 50 s panPan2.chr2A 1408831 21 + 114371477 ACACAGGGGGAGTCACGACAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1431976 21 + 1464242 ACACAGGAGGAGTCACGACAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157175 21 + 81552678 ACATAGGAGGAGTCATGACAC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1457883 21 - 111193037 ACACAGGAGGAGTCATGACAC i macFas5.chr13 T 50 C 0 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1485988 0 + 3644372 C e rheMac8.chr13 1485502 0 + 108979918 C a score=27163.000000 s hg38.chr2_KI270774v1_alt 172417 20 + 223625 AGCAGTGTAAGAGCCGCCAC s panTro5.chr2A 1469501 20 + 111504155 AGCAGTGTAAGAGCTGCCAC i panTro5.chr2A T 50 C 0 s panPan2.chr2A 1408852 20 + 114371477 AGCAGTGTAAGAGCTGCCAC i panPan2.chr2A C 0 T 133 s gorGor5.CYUI01015607v1 1431997 20 + 1464242 AGCAGTGTAAGAGCCGCCAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157196 20 + 81552678 AGCAGTATAAGAGCTGCCAC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1457904 20 - 111193037 AGCAGTGTAAGAGCTGCCAC i macFas5.chr13 C 0 C 0 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1485988 0 + 3644372 C e rheMac8.chr13 1485502 0 + 108979918 C a score=6441.000000 s hg38.chr2_KI270774v1_alt 172437 8 + 223625 GAGGGTCC s panTro5.chr2A 1469521 8 + 111504155 GAGGGTCC i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1432017 8 + 1464242 GAGGGTCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157216 8 + 81552678 GTGGGTCC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1457924 8 - 111193037 GCGGGTCC i macFas5.chr13 C 0 T 50 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1485988 0 + 3644372 C e rheMac8.chr13 1485502 0 + 108979918 C e panPan2.chr2A 1408872 133 + 114371477 T a score=8493.000000 s hg38.chr2_KI270774v1_alt 172445 11 + 223625 CACACAGGGGG s panTro5.chr2A 1469529 11 + 111504155 CACACAGGAGG i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1432025 11 + 1464242 CACACAGGAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157224 11 + 81552678 CACACAGGGAC i nomLeu3.chr19 C 0 I 1 s macFas5.chr13 1457882 11 - 111193037 CACACAGGAGG i macFas5.chr13 T 50 C 0 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1485988 0 + 3644372 C e rheMac8.chr13 1485502 0 + 108979918 C e panPan2.chr2A 1408872 133 + 114371477 T a score=13698.000000 s hg38.chr2_KI270774v1_alt 172456 11 + 223625 AGTCACGACAC s panTro5.chr2A 1469540 11 + 111504155 AGTCACGACAC i panTro5.chr2A C 0 T 50 s panPan2.chr2A 1408739 11 + 114371477 AGTCACGACAC i panPan2.chr2A T 133 C 0 s gorGor5.CYUI01015607v1 1432036 11 + 1464242 AGTCACGACAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157236 11 + 81552678 AGTCTTGACAC i nomLeu3.chr19 I 1 C 0 s macFas5.chr13 1457893 11 - 111193037 AGTCATGACAC i macFas5.chr13 C 0 C 0 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1485988 0 + 3644372 C e rheMac8.chr13 1485502 0 + 108979918 C a score=36335.000000 s hg38.chr2_KI270774v1_alt 172467 28 + 223625 AGCAGTGTAAGAGCCGCCACGAGGGTCC s panTro5.chr2A 1469501 28 + 111504155 AGCAGTGTAAGAGCTGCCACGAGGGTCC i panTro5.chr2A T 50 C 0 s panPan2.chr2A 1408750 28 + 114371477 AGCAGTGTAAGAGCTGCCACGTGGGTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1432047 28 + 1464242 AGCAGTGTAAGAGCCGCCACGAGGGTCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157247 28 + 81552678 AGCAGTGTAAGAGCTTCCACGTGGGTCC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1457904 28 - 111193037 AGCAGTGTAAGAGCTGCCACGCGGGTCC i macFas5.chr13 C 0 T 50 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1485988 0 + 3644372 C e rheMac8.chr13 1485502 0 + 108979918 C a score=15350.000000 s hg38.chr2_KI270774v1_alt 172495 11 + 223625 CACACAGGGGG s panTro5.chr2A 1469529 11 + 111504155 CACACAGGAGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1408778 11 + 114371477 CACACAGGAGG i panPan2.chr2A C 0 T 50 s gorGor5.CYUI01015607v1 1432075 11 + 1464242 CACACAGGAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157275 11 + 81552678 CACACAGGAGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1457882 11 - 111193037 CACACAGGAGG i macFas5.chr13 T 50 C 0 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1485988 0 + 3644372 C e rheMac8.chr13 1485502 0 + 108979918 C a score=52871.000000 s hg38.chr2_KI270774v1_alt 172506 40 + 223625 AGTCACGACACAGCAGTGTAAGAGCCGCCACGTGGGTCCC s panTro5.chr2A 1469540 40 + 111504155 AGTCACGACACAGCAGTGTAAGAGCTGCCACGTGGGTCCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1408739 40 + 114371477 AGTCACGACACAGCAGTGTAAGAGCTGCCACGTGGGTCCC i panPan2.chr2A T 50 C 0 s gorGor5.CYUI01015607v1 1432086 40 + 1464242 AGTCACGACACAATAGTGTAAGAGCCGCCACGTGGGTCCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157286 40 + 81552678 AGTCATGACACAGCCGTGTAAGAGCTGCCACGTGGGTCCC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1457893 40 - 111193037 AGTCATGACACAGCAGTGTAAGAGCTGCCACGCGGGTCCC i macFas5.chr13 C 0 T 50 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1485988 0 + 3644372 C e rheMac8.chr13 1485502 0 + 108979918 C a score=27435.000000 s hg38.chr2_KI270774v1_alt 172546 21 + 223625 ACACAGGGGGAGTCACGACAC s panTro5.chr2A 1469580 21 + 111504155 ACACAGGGGGAGTCACGACAC i panTro5.chr2A C 0 T 100 s panPan2.chr2A 1408779 21 + 114371477 ACACAGGAGGAGTCACGACAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1432126 21 + 1464242 ACACAGGAGGAGTCAAGACAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157326 21 + 81552678 ACACAGGAGGAGTCATGACAC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1457883 21 - 111193037 ACACAGGAGGAGTCATGACAC i macFas5.chr13 T 50 C 0 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1485988 0 + 3644372 C e rheMac8.chr13 1485502 0 + 108979918 C a score=34438.000000 s hg38.chr2_KI270774v1_alt 172567 28 + 223625 AGCAGTGTAAGAGCCGCCACGA--GGGTCC s panTro5.chr2A 1469501 28 + 111504155 AGCAGTGTAAGAGCTGCCACGA--GGGTCC i panTro5.chr2A T 100 C 0 s panPan2.chr2A 1408800 30 + 114371477 AGCAGTGTAAGAGCTGCCACACATGGGTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1432147 28 + 1464242 AGCAGTGTAAGAGCCGCCACGT--GGGTCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157347 28 + 81552678 AGCAGTGTAAGAGCTGCCACGT--GGGTCC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1457904 28 - 111193037 AGCAGTGTAAGAGCTGCCACGC--GGGTCC i macFas5.chr13 C 0 T 50 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1485988 0 + 3644372 C e rheMac8.chr13 1485502 0 + 108979918 C a score=4365.000000 s hg38.chr2_KI270774v1_alt 172595 3 + 223625 CAC s panTro5.chr2A 1469529 3 + 111504155 CAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1408830 3 + 114371477 CAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1432175 3 + 1464242 CAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157375 3 + 81552678 CAC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1457882 3 - 111193037 CAC i macFas5.chr13 T 50 C 0 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1485988 0 + 3644372 C e rheMac8.chr13 1485502 0 + 108979918 C a score=15022.000000 s hg38.chr2_KI270774v1_alt 172598 8 + 223625 ACAGGGGG s panTro5.chr2A 1469532 8 + 111504155 ACAGGAGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1408833 8 + 114371477 ACAGGGGG i panPan2.chr2A C 0 T 102 s gorGor5.CYUI01015607v1 1432178 8 + 1464242 ACAGGAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157378 8 + 81552678 ACAGGAGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1457885 8 - 111193037 ACAGGAGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1485988 8 + 3644372 ACAGGAGG i macNem1.NW_012011978v1 C 0 C 0 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e rheMac8.chr13 1485502 0 + 108979918 C a score=72951.000000 s hg38.chr2_KI270774v1_alt 172606 40 + 223625 AGTCACGACACAGCAGTGTAAGAGCTGCCACGTG-GGTCCC s panTro5.chr2A 1469540 40 + 111504155 AGTCACGACACAGCAGTGTAAGAGCTGCCACGTG-GGTCCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1408739 40 + 114371477 AGTCACGACACAGCAGTGTAAGAGCTGCCACGTG-GGTCCC i panPan2.chr2A T 102 C 0 s gorGor5.CYUI01015607v1 1432186 40 + 1464242 AGTCACGACACAGCAGTGTAAGAGCCGCCACGAG-GGTCCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157386 41 + 81552678 AGTCATGACACAGCAGTGTAAGAGCTGCCACACGTGGTCCC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1457893 40 - 111193037 AGTCATGACACAGCAGTGTAAGAGCTGCCACGCG-GGTCCC i macFas5.chr13 C 0 T 50 s macNem1.NW_012011978v1 1485996 40 + 3644372 AGTCATGACACAGCAGTGTAAGAGCTGCCACGCG-GGTCCC i macNem1.NW_012011978v1 C 0 I 384 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e rheMac8.chr13 1485502 0 + 108979918 C a score=52325.000000 s hg38.chr2_KI270774v1_alt 172646 40 + 223625 ACACAGGG-GGAGTCACGACACAGCAGTGTAAGAGCCGCCA s panTro5.chr2A 1469580 40 + 111504155 ACACAGGG-GGAGTCACGACACAGCAGTGTAAGAGCTGCCA i panTro5.chr2A C 0 T 100 s panPan2.chr2A 1408779 40 + 114371477 ACACAGGA-GGAGTCACGACACAGCAGTGTAAGAGCTGCCA i panPan2.chr2A C 0 T 80 s gorGor5.CYUI01015607v1 1432226 40 + 1464242 ACACAGGA-GGAGTCACGACACAGCAGTGTAAGAGCCGCCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157427 41 + 81552678 ACACAGGGAGGAGTCATGACACAGCAGTGTAAGAGCTGCCA i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1457883 40 - 111193037 ACACAGGA-GGAGTCATGACACAGCAGTGTAAGAGCTGCCA i macFas5.chr13 T 50 C 0 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1486036 384 + 3644372 I e rheMac8.chr13 1485502 0 + 108979918 C a score=7441.000000 s hg38.chr2_KI270774v1_alt 172686 9 + 223625 CGAGGGTCC s panTro5.chr2A 1469520 9 + 111504155 CGAGGGTCC i panTro5.chr2A T 100 C 0 s gorGor5.CYUI01015607v1 1432266 9 + 1464242 CGAGGGTCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157468 9 + 81552678 CGTGGGTCC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1457923 9 - 111193037 CGCGGGTCC i macFas5.chr13 C 0 T 50 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1486036 384 + 3644372 I e rheMac8.chr13 1485502 0 + 108979918 C e panPan2.chr2A 1408819 80 + 114371477 T a score=10152.000000 s hg38.chr2_KI270774v1_alt 172695 11 + 223625 CACACAGGGGG s panTro5.chr2A 1469529 11 + 111504155 CACACAGGAGG i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1432275 11 + 1464242 CACACAGGAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157477 11 + 81552678 CACACAGGAGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1457882 11 - 111193037 CACACAGGAGG i macFas5.chr13 T 50 C 0 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1486036 384 + 3644372 I e rheMac8.chr13 1485502 0 + 108979918 C e panPan2.chr2A 1408819 80 + 114371477 T a score=38221.000000 s hg38.chr2_KI270774v1_alt 172706 28 + 223625 AGTCACGACACAGCAGTGTAAGAGCCGC s panTro5.chr2A 1469540 28 + 111504155 AGTCACGACACAGCAGTGTAAGAGCTGC i panTro5.chr2A C 0 I 52 s panPan2.chr2A 1408739 28 + 114371477 AGTCACGACACAGCAGTGTAAGAGCTGC i panPan2.chr2A T 80 I 52 s gorGor5.CYUI01015607v1 1432286 28 + 1464242 AGTCACGACACAGCAGTGTAAGAGCCGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157488 28 + 81552678 AGTCATGACACAGCAGTGTAAGAGCTGC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1457893 28 - 111193037 AGTCATGACACAGCAGTGTAAGAGCTGC i macFas5.chr13 C 0 C 0 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1486036 384 + 3644372 I e rheMac8.chr13 1485502 0 + 108979918 C a score=4624.000000 s hg38.chr2_KI270774v1_alt 172734 5 + 223625 CACGT s panTro5.chr2A 1469620 5 + 111504155 CACAT i panTro5.chr2A I 52 T 52 s panPan2.chr2A 1408819 5 + 114371477 CACAT i panPan2.chr2A I 52 T 52 s gorGor5.CYUI01015607v1 1432314 5 + 1464242 CACGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157516 5 + 81552678 CACGT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1457921 5 - 111193037 CACGC i macFas5.chr13 C 0 C 0 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1486036 384 + 3644372 I e rheMac8.chr13 1485502 0 + 108979918 C a score=10365.000000 s hg38.chr2_KI270774v1_alt 172739 7 + 223625 GGGTCCC s panTro5.chr2A 1469573 7 + 111504155 GGGTCCC i panTro5.chr2A T 52 C 0 s panPan2.chr2A 1408772 7 + 114371477 GGGTCCC i panPan2.chr2A T 52 C 0 s gorGor5.CYUI01015607v1 1432319 7 + 1464242 GGGTCCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157521 7 + 81552678 GGGTCCC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1457926 7 - 111193037 GGGTCCC i macFas5.chr13 C 0 T 50 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1486036 384 + 3644372 I e rheMac8.chr13 1485502 0 + 108979918 C a score=60454.000000 s hg38.chr2_KI270774v1_alt 172746 49 + 223625 ACACAGGGGGAGTCACGACACAGCAGTGTAAGAGCCGCCACGA--GGGTCC s panTro5.chr2A 1469580 51 + 111504155 ACACAGGGGGAGTCACGACACAGCAGTGTAAGAGCTGCCACACATGGGTCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1408779 51 + 114371477 ACACAGGAGGAGTCACGACACAGCAGTGTAAGAGCTGCCACACATGGGTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1432326 49 + 1464242 ACACAGGAGGAGTCACGACACAGCAGTGTAAGAGCCGCCACGA--GGGTCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157528 49 + 81552678 ACACAGGAGGAGTCATGACACAGCAGTGTAAGAGCGGCCACGT--GGGTCC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1457883 49 - 111193037 ACACAGGAGGAGTCATGACACAGCAGTGTAAGAGCTGCCACGC--GGGTCC i macFas5.chr13 T 50 T 50 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1486036 384 + 3644372 I e rheMac8.chr13 1485502 0 + 108979918 C a score=54170.000000 s hg38.chr2_KI270774v1_alt 172795 42 + 223625 CACACAGGGGGAGTCACGACACAGCAGTGTAAGAGCCGCCAC s panTro5.chr2A 1469631 42 + 111504155 CACACAGGGGGAGTCACGACACAGCAGTGTAAGAGCTGCCAC i panTro5.chr2A C 0 T 48 s panPan2.chr2A 1408830 42 + 114371477 CACACAGGGGGAGTCACGACACAGCAGTGTAAGAGCTGCCAC i panPan2.chr2A C 0 T 48 s gorGor5.CYUI01015607v1 1432375 42 + 1464242 CACACAGGAGGAGTCACGACACAGCAGTGTAAGAGCCGCCAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157577 41 + 81552678 CACACAGGA-GAGTCATGACACAGCAATGTAAGAGCTGCCAC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1457882 42 - 111193037 CACACAGGAGGAGTCATGACACAGCAGTGTAAGAGCTGCCAC i macFas5.chr13 T 50 C 0 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1486036 384 + 3644372 I e rheMac8.chr13 1485502 0 + 108979918 C a score=186.000000 s hg38.chr2_KI270774v1_alt 172837 2 + 223625 GA s gorGor5.CYUI01015607v1 1432417 2 + 1464242 GA i gorGor5.CYUI01015607v1 C 0 I 200 s nomLeu3.chr19 1157618 2 + 81552678 GT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1457924 2 - 111193037 GC i macFas5.chr13 C 0 C 0 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1486036 384 + 3644372 I e rheMac8.chr13 1485502 0 + 108979918 C e panPan2.chr2A 1408872 48 + 114371477 T e panTro5.chr2A 1469673 48 + 111504155 T a score=10365.000000 s hg38.chr2_KI270774v1_alt 172839 7 + 223625 GGGTCCC s panTro5.chr2A 1469625 7 + 111504155 GGGTCCC i panTro5.chr2A T 48 C 0 s panPan2.chr2A 1408824 7 + 114371477 GGGTCCC i panPan2.chr2A T 48 C 0 s gorGor5.CYUI01015607v1 1432619 7 + 1464242 GGGTCCC i gorGor5.CYUI01015607v1 I 200 C 0 s nomLeu3.chr19 1157620 7 + 81552678 GGGTCCC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1457926 7 - 111193037 GGGTCCC i macFas5.chr13 C 0 T 50 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1486036 384 + 3644372 I e rheMac8.chr13 1485502 0 + 108979918 C a score=-1796.000000 s hg38.chr2_KI270774v1_alt 172846 11 + 223625 ACACAGG-------------------------------------------------------------------------------------------------GGGA s panTro5.chr2A 1469632 11 + 111504155 ACACAGG-------------------------------------------------------------------------------------------------GGGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1408831 11 + 114371477 ACACAGG-------------------------------------------------------------------------------------------------GGGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1432626 11 + 1464242 ACACAGG-------------------------------------------------------------------------------------------------AGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157627 108 + 81552678 ACACAGGAGAGTCATGACACAGCAGTGTAAGAGGTGCCACGTGGGTCCCACACAGGAGAGTCATGACACAGCGGTGTAAGAGCTGCCACGCGTGGGTCCCACACAGGA i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1457883 11 - 111193037 ACACAGG-------------------------------------------------------------------------------------------------AGGA i macFas5.chr13 T 50 C 0 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e calJac3.chr14 1433906 4 - 108792865 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1486036 384 + 3644372 I e rheMac8.chr13 1485502 0 + 108979918 C a score=6507.000000 s hg38.chr2_KI270774v1_alt 172857 5 + 223625 GTCAC s panTro5.chr2A 1469643 5 + 111504155 GTCAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1408842 5 + 114371477 GTCAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1432637 5 + 1464242 GTCAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157735 5 + 81552678 GTCGT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1457894 5 - 111193037 GTCAT i macFas5.chr13 C 0 C 0 s calJac3.chr14 1433910 5 - 108792865 GTAAT i calJac3.chr14 I 4 C 0 e aotNan1.NW_018513311v1 175168 54 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1262825 31 - 7082604 I e cebCap1.NW_016107827v1 1356590 33 + 1864846 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1486036 384 + 3644372 I e rheMac8.chr13 1485502 0 + 108979918 C a score=103625.000000 s hg38.chr2_KI270774v1_alt 172862 27 + 223625 GACACAGCAGTGTAAGAGCTGCCACAC s panTro5.chr2A 1469648 27 + 111504155 GACACAGCAGTGTAAGAGCTGCCACAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1408847 27 + 114371477 GACACAGCAGTGTAAGAGCTGCCACAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1432642 27 + 1464242 GACACAGCAGTGTAAGAGCTGCCACAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157740 27 + 81552678 GACACAGCAGTATAAGAGCTGCCACGC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1457899 27 - 111193037 GACACAGCAGTGTAAGAGCTGCCACGC i macFas5.chr13 C 0 C 0 s calJac3.chr14 1433915 27 - 108792865 GACACAGCAGTGTACGAGCTGCCACGT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1262856 27 - 7082604 GACACAGCAGTCTACGAGCTGCCACAC i saiBol1.JH378218 I 31 C 0 s cebCap1.NW_016107827v1 1356623 27 + 1864846 GACACAGCAGTGTATGAGCTGCCACAT i cebCap1.NW_016107827v1 I 33 C 0 s aotNan1.NW_018513311v1 175222 27 + 287728 GACACAGCAGTGTACGAGCTGCCACAC i aotNan1.NW_018513311v1 I 54 C 0 e mm10.chr12 90030866 3028 - 120129022 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1486036 384 + 3644372 I e rheMac8.chr13 1485502 0 + 108979918 C a score=4202.000000 s hg38.chr2_KI270774v1_alt 172889 2 + 223625 AT s panTro5.chr2A 1469675 2 + 111504155 AT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1408874 2 + 114371477 AT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1432669 2 + 1464242 AT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157767 2 + 81552678 GT i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1433942 2 - 108792865 GT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1262883 2 - 7082604 GT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1356650 2 + 1864846 GT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 175249 2 + 287728 GT i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e colAng1.NW_012118821v1 1443327 0 - 13651311 C e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e chlSab2.chr14 1520575 0 - 107702431 C e cerAty1.NW_012000820v1 1440634 0 - 10304083 C e macNem1.NW_012011978v1 1486036 384 + 3644372 I e macFas5.chr13 1457926 0 - 111193037 C e rheMac8.chr13 1485502 0 + 108979918 C a score=61178.000000 s hg38.chr2_KI270774v1_alt 172891 7 + 223625 GGGTCCC s panTro5.chr2A 1469677 7 + 111504155 GGGTCCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1408876 7 + 114371477 GGGTCCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1432671 7 + 1464242 GGGTCCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157769 7 + 81552678 GGGTCCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1485502 7 + 108979918 GGGTCCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1457926 7 - 111193037 GGGTCCC i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1440634 7 - 10304083 GGGTCCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520575 7 - 107702431 GGGTCCC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1443327 7 - 13651311 GAGTCCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1433944 7 - 108792865 GGGTCCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1262885 7 - 7082604 GGGTCCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1356652 7 + 1864846 GGGTCCC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 175251 7 + 287728 GGGTCCC i aotNan1.NW_018513311v1 C 0 I 97 e mm10.chr12 90030866 3028 - 120129022 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e macNem1.NW_012011978v1 1486036 384 + 3644372 I a score=141971.000000 s hg38.chr2_KI270774v1_alt 172898 21 + 223625 TGCGGCCTGCAgttcgaagcc s panTro5.chr2A 1469684 21 + 111504155 TGCGGCCTGCAgttcgaagcc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1408883 21 + 114371477 TGCAGCCTGCAgttcgaagcc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1432678 21 + 1464242 TGCGGCCTGCAgttcgaagcc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157776 21 + 81552678 TGCGGCCTGCAgttcaaagcc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1485509 21 + 108979918 TGTGGCCTGCAGTTCGAAGCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1457933 21 - 111193037 TGTGGCCTGCAGTTCGAAGCC i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1440641 21 - 10304083 TGCGGCCTGCAGTGTGAAGCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520582 21 - 107702431 TGTGGCCTGCAGTTCGAAGCC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1443334 21 - 13651311 TGCGGCCTGCAGTTCAAAGCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1433951 21 - 108792865 TGTGGCCTGCAGTTCGAAGCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1262892 21 - 7082604 TGTGGCCTGCAGTTCGAAGCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1356659 21 + 1864846 TGTGGCCTGCGGTTTGAAGCC i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 175258 97 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e otoGar3.GL873658 953830 115 + 5252280 I e dasNov3.JH576208 1780832 170 + 4416731 I e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e macNem1.NW_012011978v1 1486036 384 + 3644372 I a score=24778.000000 s hg38.chr2_KI270774v1_alt 172919 3 + 223625 cac s panTro5.chr2A 1469705 3 + 111504155 cac i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1408904 3 + 114371477 cac i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1432699 3 + 1464242 cac i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157797 3 + 81552678 cac i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1485530 3 + 108979918 CAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1457954 3 - 111193037 CAC i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1440662 3 - 10304083 CAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520603 3 - 107702431 CAC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1443355 3 - 13651311 CAC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1433972 3 - 108792865 CAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1262913 3 - 7082604 CAC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1356680 3 + 1864846 CAC i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 953945 3 + 5252280 CAT i otoGar3.GL873658 I 115 C 0 e aotNan1.NW_018513311v1 175258 97 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e dasNov3.JH576208 1780832 170 + 4416731 I e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e macNem1.NW_012011978v1 1486036 384 + 3644372 I a score=159621.000000 s hg38.chr2_KI270774v1_alt 172922 21 + 223625 tgcatgtgttagcactctata s panTro5.chr2A 1469708 21 + 111504155 tgcatgtgttagcactctata i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1408907 21 + 114371477 tgcatgtgttagcactctata i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1432702 21 + 1464242 tgcatgtgttagcactctata i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157800 21 + 81552678 tgcatgtgttagcactctata i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1485533 21 + 108979918 TGCGTGTGTTAGCACTCTATA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1457957 21 - 111193037 TGCGTGTGTTAGCACTCTATA i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1440665 21 - 10304083 TGCGTGTATTAGCACTCTATA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520606 21 - 107702431 TGCATGTGTTAGCACTCTATA i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1443358 21 - 13651311 TGCGTGTGTTAGCACTCTATA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1433975 21 - 108792865 TGCATGTGTTAGCTCTCTGTA i calJac3.chr14 C 0 I 14 s saiBol1.JH378218 1262916 21 - 7082604 TGCATGTGTTAGCTCTCTGTA i saiBol1.JH378218 C 0 I 14 s cebCap1.NW_016107827v1 1356683 21 + 1864846 TGCATGTGTTAGCTCTCTGTA i cebCap1.NW_016107827v1 C 0 I 25 s otoGar3.GL873658 953948 21 + 5252280 TGCCTGTTTTAGTTCTCTCTG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1781002 21 + 4416731 tacatgtattaactctacttt i dasNov3.JH576208 I 170 C 0 e aotNan1.NW_018513311v1 175258 97 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e macNem1.NW_012011978v1 1486036 384 + 3644372 I a score=23278.000000 s hg38.chr2_KI270774v1_alt 172943 5 + 223625 cc-----cca s panTro5.chr2A 1469729 5 + 111504155 cc-----cca i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1408928 5 + 114371477 cc-----cca i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1432723 5 + 1464242 cc-----cca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157821 5 + 81552678 cc-----cca i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1485554 5 + 108979918 CC-----CCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1457978 5 - 111193037 CC-----CCA i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1440686 5 - 10304083 CC-----CCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520627 5 - 107702431 CC-----CCA i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1443379 5 - 13651311 CC-----CCG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1434010 10 - 108792865 GCACAGAACA i calJac3.chr14 I 14 I 8 s saiBol1.JH378218 1262951 5 - 7082604 CC-----ACA i saiBol1.JH378218 I 14 I 8 s otoGar3.GL873658 953969 5 + 5252280 TC-----CCG i otoGar3.GL873658 C 0 I 7 s dasNov3.JH576208 1781023 5 + 4416731 ct-----cca i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 175258 97 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1356704 25 + 1864846 I e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e macNem1.NW_012011978v1 1486036 384 + 3644372 I a score=132343.000000 s hg38.chr2_KI270774v1_alt 172948 20 + 223625 gccaccgtagaaggccggac s panTro5.chr2A 1469734 20 + 111504155 gccaccgtagaaggccggac i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1408933 20 + 114371477 gccaccgtagaaggccggac i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1432728 20 + 1464242 gccaccgtagaaggccggac i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157826 20 + 81552678 gccaccgtagaaggccgggc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1485559 20 + 108979918 GCCACCGCGGAAGGCCAGAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1457983 20 - 111193037 GCCACCGCGGAAGGCCAGAC i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1440691 20 - 10304083 GCCAGTGCAGAAGGCCAGAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520632 20 - 107702431 GCCACCGCGGAAGGCCGGAC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1443384 20 - 13651311 GCCACTGCAGAAGGCCAGAC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1434028 20 - 108792865 GCCACGGTTGAAGGCCGGGC i calJac3.chr14 I 8 C 0 s saiBol1.JH378218 1262964 20 - 7082604 GCCACTGTCGAAGGCCAGGC i saiBol1.JH378218 I 8 C 0 s cebCap1.NW_016107827v1 1356729 20 + 1864846 GCCACCGTCGAAGGCCGGGC i cebCap1.NW_016107827v1 I 25 C 0 s aotNan1.NW_018513311v1 175355 20 + 287728 GCCACCGTAGAAGGCCGGGC i aotNan1.NW_018513311v1 I 97 C 0 s otoGar3.GL873658 953981 19 + 5252280 ACAACCCTGGTGGTTTGGT- i otoGar3.GL873658 I 7 C 0 s dasNov3.JH576208 1781028 20 + 4416731 ttaactctatgaggttgtat i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I e macNem1.NW_012011978v1 1486036 384 + 3644372 I a score=2268419.000000 s hg38.chr2_KI270774v1_alt 172968 265 + 223625 tgcgatca-------ctttctaa------aagatggatcgagagactgaagcacagacagtttaggcaacttccccaggtcTG-AATTCCAGCAACTGGAGGCATC--GA-TGCACCAGAAAGGCCACAAACCTGGCAGAGGCTTCATTAGATCTGATCAGTTCGATCTGAGGATAAATCAGATAAAA---------GAGAAACGCTCATGTCTCAGCAAGCTGA---GCTGTGATGATGATTTCCACTACGCCCTGAAATC---TTTTGTTGTACTTTACGGGGA-ATATAAAATGT s panTro5.chr2A 1469754 265 + 111504155 tgcgatca-------ctttctaa------aagatggatcgagagactgaagcacagacagtttaggcaacttccccaggtcTG-AATTCCAGCAACTGGAGGCATT--GA-TGCACCAGAAAGGCCACAAACCTGGCAGAGGCTTCATTAGATCTGATCAGTTAGATCTGAGGATAAATCAGATAAAA---------GAGAAACGCTCATGTCTCAGCAAGCTGA---GCTGTGATGATGATTTCCACTACGCCCTAAAATC---TTTTGTTGTACTTTACGGGGA-ATATAAAATGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1408953 265 + 114371477 tgcgatca-------ctttctaa------aagatggatcgagagactgaagcacagacagtttaggcaacttccccaggtcTG-AATTCCAGCAACTGGAGGCATT--GA-TGCACCAGAAAGGCCACAAACCTGGCAGAGGCTTCATTAGATCTGATCAGTTAGATCTGAGGATAAATCAGATAAAA---------GAGAAACGCTCATGGCTCAGCAAGCTGA---GCTGTGATGATGATTTCCACTACGCCCTAAAATC---TTTTGTTGTACTTTACGGGGA-ATATAAAATGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1432748 265 + 1464242 tgcgatca-------ctttctaa------aagatggatcgagagactgaagcacagacagtttaggcaacttccccaggtcTG-AATTCCAGCAACTGGAAGCATC--GA-TGCACCAGAAAGGCCACAAACCTGGCAGAGGCTTTGTTAGATCTGATCAGTTAGATCTGAGGATAAATCAGATAAAA---------GAGAAACGCTCATGTCTCAGCAAGCTGA---GCTGTGATGATGATTTCCACTACGCCCTGAAATC---TTTTGTTGTACTTTACGGGGA-ATATAAAATGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1157846 268 + 81552678 tgcgatca-------ctttctaa------aagatggatcaagagactgaagcacagacagtttaggcaacttccccaggtcTG-AATTCCAGTACCTGGAGGCATC--GA-TGCACCAGAAAGGCCACAAACCTGACAGAGGCTTCATTAGATTTGATCAGTTGGATCCGAGGATAAATTAGATAAAA---------GAGAAACGCTGGTGTCTCAGCAAGCTGAGCTGCTGCGATGGTGATTTCCACTGCGCCCTGAAAGC---CTTTGTTGTGCTTTACGGGGA-ATATAAAATGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1485579 265 + 108979918 TGCGATCA-------CGTTCTAA------AAGATGGACTGAGAGACTGACACACAGACAGTTTAGGCAACGTCCCCAGGTCTG-AATTCCAGCAACTGGAGGCATC--GA-TGCACCAGAAAGGCCACAAACCCAGCAGAAGCTTCGTTAGATCTGATTAGTTAGATCTCAGGCTAAATTAGATAAAA---------GAGAAACGCTCGTGTCTCAGCACGCTGA---GCTGGGATGGTGATTTCCGCCACGCCCTGAAATC---GTTTGTTGTACTTTACTGTGA-ATATAAAATGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1458003 265 - 111193037 TGCGATCA-------CGTTCTAA------AAGATGGACTGAGAGACTGACACACAGACAGTTTAGGCAACGTCCCCAGGTCTG-AATTCCAGCAACTGGAGGCATC--GA-TGCACCAGAAAGGCCACAAACCCAGCAGAAGCTTCGTTAGATCTGATTAGTTAGATCTCAGGCTAAATTAGATAAAA---------GAGAAACGCTCGTGTCTCAGCACGCTGA---GCTGGGATGGTGATTTCCGCCACGCCCTGAAATC---GTTTGTTGTACTTTACTGTGA-ATATAAAATGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1486420 265 + 3644372 TGCGATCA-------CGTTCTAA------AAGATGGACTGAGAGACTGACACACAGACAGTTTAGGCAACGTCCCCAGGTCTG-AATTCCAGCAACTGGAGGCATC--GA-TGCACCAGAAAGGCCACAAACCCAGCAGAAGCTTCGTTAGATCTGATTAGTTAGATCTCAGGCTAAATTAGATAAAA---------GAGAAACGCTCGTGTCTCAGCACGCTGA---GCTGGGATGGTGATTTCCGCCACGCCCCGAAATC---GTTTGTTGTACTTTACTGTGA-ATATAAAATGT i macNem1.NW_012011978v1 I 384 C 0 s cerAty1.NW_012000820v1 1440711 265 - 10304083 TGCGATCC-------CGTTCTAA------AAGATGGATTGAGAGGCTGACACACAGACAGTTTAGGCAACGTCCCCAGGTCTG-AATTCCAGCAACTGGAGGCATC--GA-TGCACCAGAAAGGCCACAAACCCAGCAGAAGCTTCGTTAGATCTGATTAGTTAGATCTCAGGCTGAATTAGATAAAA---------GAGAAACGCTCGTGTCTCAGCACGCTGA---GCTGGGATGATGATTTCCGCCACGCCCTGAAATC---GTTTGTTGTACTTTACAGTGA-ATATAAAATGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520652 265 - 107702431 TGCGATCA-------CGTTCTAA------AAGATAGATTGAGAGACTGACACACAGACAGTTTAGGCAACGTCCCCAGGTCTG-AATTCCAGCAACTGGAGGCATC--GA-TGCACCAGAAAGGCCCCAAACCCAGCAGAGGCTTCGTTAGATCTGATCAGTTAGATCTCAGGCTGAATTAGATAAAA---------GAGAAACGCTCGTGTCTCAGCACGCTGA---GCTGGGATGATGATTTCCGCCACGCCCTGAAATC---GTTTGTTGTACTTTACAGTGA-ATATAAAATGT i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1443404 265 - 13651311 TGTGATCA-------CGTTCTAA------AAGATGGATTGAGAGACTGACACACAGACAGTTTGGGCAACTTCCCCAGGTCTG-AATTCCAGCAACTGGAGGCATT--GA-TGCACCAGAAAGGCCACAAACCCAGCAGAGGCTTCATTAGATCTGATTAGTTAGATCTCAGGCTAAATTAGATAAAA---------GAGAAACGCTCGCGTCTCAGCAAGCTGA---GCTGGGATGATGATTTCCGCCATGCCCTGAAATT---GTTTGTCATACTTTACAGTGA-ATATAAGATGT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1434048 263 - 108792865 TGCAATCA-------CTTTTTAA------AAGATGGATTGAGACACTGAAGCACAGACAGTGGAGGCAACTTCCCCACGTCTG-AATTCCAGCAATGGGACGTGTC--GC-TGCGCCAGAAAGGCCACAAACGTGGCAGCAGCTTCAGTAGATTTGATCAGTTAGATCTGAGGCTAAATTGGATGAAA---------GAGAAAGGCTCGTGTCACAGCAAGCTAA---GCTGGGATGATGATTTTCACTACGCCCTGAAATC-----CTGTTGTGCTTTACAGGGA-ATATAAAATGT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1262984 244 - 7082604 TGCGATCA-------CTTTTTAA------AAGATGGATGGAGG------------------GTAGGCAACTTCCCCACGTCTG-AATTCCAGCAATTGGAGGCTTC--GC-TGCACCAGAAAGGCCAGAAACATGGCAGCGGCTTCATTCGATTTGATCAGTGAGATCTGAAGCTAAACTGGATAAAA---------GAGAAAGGCTCGTGTCACAGCAAGCTAA---GCTGG---GATGATTTTCACTGCGCCCTGAAATC---TTTTGTTGTACTTTACGGGGA-ATATAAAATGT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1356749 262 + 1864846 TGCGATCA-------CTTTTTAA------AAGATGGATGGAGACGCTGAAGCACAG--AGTGTAGGCAACTTTCCCACGTCTA-AGTTCCAGCAACTGGAGGCATC--GC-TGCACCAGAATGGCCACAAACGTGGCAGCGGCTTCATTAGATTTGATCAGTTAGATCTGAGGCTAAATTGGATAAAA---------GAGAAAGGCTCGTGTCACAGCAAGCTAA---GCTGGGATGATGATTTTCACTACG-CCTGAAATC---TTTTGTTGTACTTTACAGGGA-ATATAAAATGT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 175375 265 + 287728 TGCGatca-------ctttttaa------aagatggatcgagacactgacgcacagagagtgtaggcaacttccccaCGTCTG-AATTCCAGCAATTGGAGGCGTC--AC-TGCACCAGAAAGGCCACAAACGTGGCAGCGGCTTCATTAGATTTGATCAGTTACATCTCAGGCTAAGTTGGATAAAA---------GAGAAAGGCTCGTGTCACAGCAAGCTAA---GCTGGGATGATGATTTTCACTACGCCCTGAAATC---TTCTGTTGTACTTTACAGGGA-ATATAAACTGT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 954000 260 + 5252280 CATGATCGCTCTTCTCTCTTTCA------AAACCTGATGAGGAGACTGAGTGCCAG--AGCGCTGCCAAACCCCACA---CTC-AGTTCTTGCAGCCAGAGGCTCG--GGCTGCAGC----TGGTCACCTACAC-GTGGACACTTCCCTGAACCCGATCAACTAGATCAGAGGCTCAGTCAGACAAGAG--CTCACTGAGAAACGCTCTTGTA----------AA---GATGCGGGGATGTCTTCCACTGCACCCTGAAATA---CCGTCTTTTACTTTGCAGAGA-ATGTAAAATAT i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1781048 273 + 4416731 tatgatca-------cgttgtggttttttttaactgataaggagactgacctacagagagtttgggcaccttctccaggttcacattttcagcaagtggAAATATTTGGA-TGTTACAAGAGAGCCACATATGTAATGAACATTTAATAAA----GATCAGTTAGATCTAAGGCTAAGTTAGATGATAAACTTTGCTGAGAAATTCTCAT------------TAA-ATGATGGGATGATGACCTCTACTACATCTTGAAATCTTCTTTTGTTTTACCTTGGAGGGATGAATAAAATAT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e manLeu1.NW_012103754v1 1005301 8066 - 2200435 I a score=91892.000000 s hg38.chr2_KI270774v1_alt 173233 8 + 223625 ACAACCTT s panTro5.chr2A 1470019 8 + 111504155 GCAACCTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1409218 8 + 114371477 GCAACCTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1433013 8 + 1464242 ACAACCTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1158114 8 + 81552678 ACAACCTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1485844 8 + 108979918 ACAACCTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1458268 8 - 111193037 ACAACCTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1486685 8 + 3644372 ACAACCTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1440976 8 - 10304083 ACAACCTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520917 8 - 107702431 ACAACCTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1013367 8 - 2200435 ACAACCTT i manLeu1.NW_012103754v1 I 8066 C 0 s colAng1.NW_012118821v1 1443669 8 - 13651311 ACAACCTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1434311 8 - 108792865 TCAACCTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1263228 8 - 7082604 CCAACATT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1357011 8 + 1864846 CCAACCTT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 175640 8 + 287728 CCAACCTT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 954260 8 + 5252280 CCAGCCTT i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1781321 8 + 4416731 CCAACCTT i dasNov3.JH576208 C 0 I 9 e mm10.chr12 90030866 3028 - 120129022 I a score=52304.000000 s hg38.chr2_KI270774v1_alt 173241 4 + 223625 CCCC s panTro5.chr2A 1470027 4 + 111504155 CCCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1409226 4 + 114371477 CCCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1433021 4 + 1464242 CCCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1158122 4 + 81552678 CCCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1485852 4 + 108979918 CCCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1458276 4 - 111193037 CCCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1486693 4 + 3644372 CCCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1440984 4 - 10304083 CCCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520925 4 - 107702431 CCCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1013375 4 - 2200435 CCCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1443677 4 - 13651311 CCCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1434319 4 - 108792865 CCCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1263236 4 - 7082604 CCCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1357019 4 + 1864846 CCCC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 175648 4 + 287728 CCCC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 954268 4 + 5252280 TCCC i otoGar3.GL873658 C 0 I 12 e mm10.chr12 90030866 3028 - 120129022 I e dasNov3.JH576208 1781329 9 + 4416731 I a score=29685.000000 s hg38.chr2_KI270774v1_alt 173245 3 + 223625 AAA s panTro5.chr2A 1470031 3 + 111504155 AAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1409230 3 + 114371477 AAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1433025 3 + 1464242 AAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1158126 3 + 81552678 AAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1485856 3 + 108979918 AAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1458280 3 - 111193037 AAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1486697 3 + 3644372 AAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1440988 3 - 10304083 AAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520929 3 - 107702431 AAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1013379 3 - 2200435 AAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1443681 3 - 13651311 AAA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1434323 3 - 108792865 CAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1263240 3 - 7082604 AAA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1357023 3 + 1864846 AAA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 175652 3 + 287728 AAA i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e otoGar3.GL873658 954272 12 + 5252280 I e dasNov3.JH576208 1781329 9 + 4416731 I a score=9555.000000 s hg38.chr2_KI270774v1_alt 173248 1 + 223625 A s panTro5.chr2A 1470034 1 + 111504155 A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1409233 1 + 114371477 A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1433028 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1158129 1 + 81552678 A i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1485859 1 + 108979918 A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1458283 1 - 111193037 A i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1486700 1 + 3644372 A i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1440991 1 - 10304083 A i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520932 1 - 107702431 A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1013382 1 - 2200435 A i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1443684 1 - 13651311 A i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1434326 1 - 108792865 A i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1263243 1 - 7082604 A i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1357026 1 + 1864846 A i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 175655 0 + 287728 C e mm10.chr12 90030866 3028 - 120129022 I e otoGar3.GL873658 954272 12 + 5252280 I e dasNov3.JH576208 1781329 9 + 4416731 I a score=14161.000000 s hg38.chr2_KI270774v1_alt 173249 2 + 223625 CA s panTro5.chr2A 1470035 2 + 111504155 CA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1409234 2 + 114371477 CA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1433029 2 + 1464242 CA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1158130 2 + 81552678 CA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1485860 2 + 108979918 CA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1458284 2 - 111193037 CA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1486701 2 + 3644372 CA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1440992 2 - 10304083 CA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520933 2 - 107702431 CA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1013383 2 - 2200435 CA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1443685 2 - 13651311 CA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1263244 1 - 7082604 -A i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1357027 1 + 1864846 -A i cebCap1.NW_016107827v1 C 0 I 1 e aotNan1.NW_018513311v1 175655 0 + 287728 C e mm10.chr12 90030866 3028 - 120129022 I e otoGar3.GL873658 954272 12 + 5252280 I e dasNov3.JH576208 1781329 9 + 4416731 I e calJac3.chr14 1434327 0 - 108792865 C a score=7800.000000 s hg38.chr2_KI270774v1_alt 173251 1 + 223625 C s panTro5.chr2A 1470037 1 + 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1409236 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1433031 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1158132 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1485862 1 + 108979918 C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1458286 1 - 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1486703 1 + 3644372 C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1440994 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520935 1 - 107702431 C i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1013385 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1443687 1 - 13651311 C i colAng1.NW_012118821v1 C 0 C 0 s cebCap1.NW_016107827v1 1357029 1 + 1864846 C i cebCap1.NW_016107827v1 I 1 C 0 e aotNan1.NW_018513311v1 175655 0 + 287728 C e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1263245 0 - 7082604 C e otoGar3.GL873658 954272 12 + 5252280 I e dasNov3.JH576208 1781329 9 + 4416731 I e calJac3.chr14 1434327 0 - 108792865 C a score=1584222.000000 s hg38.chr2_KI270774v1_alt 173252 300 + 223625 TTTTTTGCTgctgggcacagtggctcacgcctgtaatccctgcactttgggaggccgaggcgggcagatcacgagttcaggagttcaagaccagcctggccagatggtgaaaccctgtctctactaaaaatataaaaaatcagctgggcgtggtggcagacacctgtaatcccagctacttgagaggctgaggcaggagaattgcttg-aacccaggaggcagaagttgcagtgagctgagat--catgcctctgcactccagcctgggtgacagagcgagactcagtc----aaaaaaaaaacca--a s panTro5.chr2A 1470038 299 + 111504155 TTTTTTGCTgctgggcacagtggctcacgcctgtaatccctgcactttgggaggccgaggtgggcagatcacgagttcaggagttcaagaccagcctggccagatggtgaaaccctgtctctactaaaaatataaaaaatcagctgggcgtggtggcagacacctgtaatcccagctacttgagaggctgaggcaggagaattgcttg-aacccaggaggcggaagttgcagttagctgagat--catgcctctgcactccagcctgggtgacagagcgagactcagtc----aaaaaaaaa-cca--a i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1409237 298 + 114371477 TTTTTTGCTgctgggcacagtggctcacgcctgtaatccctgcactttgggaggccgaggtgggcagatcacgagttcaggagttcaagaccagcctggccagatggtgaaaccctgtctctactaaaaatataaaaaatcagctgggcgtggtggcagacacctgtaatcccagctacttgagaggctgaggcaggagaattgcttg-aacccaggaggcggaagttgcagtgagctgagat--catgcctctgcactccagcctgcgtgacagagcgagactcagtc----aaaaaaaaa-cc---a i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1433032 299 + 1464242 TTTTTTGCTgctgggcacagtggctcacgcctgtaatccctgcactttgggaggccgaggcgggcagatcatgagttcaggagttcaagaccagcctgggcagatggtgaaaccctgtctctactaaaaatataaaaaatcagctgggcgtggtggcagacacctgtaatcccagctacttgagaggctgaggcaggagaattgcttg-aacccaggaggcggaagttgcagtgagctgagat--cctgcctctgcactccagcctgggtgacagagcgagactcagtc----aaaaaaaac-cca--a i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1158133 302 + 81552678 TTTTTTGCTgctgggcacagtggctcacacctgtaatcccagcactttgggaggccgaggcgggcagatcacgagttcaggagttcaagaccagcctggccagatggtgaaaccctgtctctactaaaaatacaaaaaatcagctgggcgtggtgacag-cacctgtaatcccagctacttgagagactgaggcaggagaattgcttg-aacccaggaggcagagattgcagtgagacgagatcacacgcctctgcactccagcctgggtgacacagcgagactcagtc----aaaacgaca-acaaca i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1485863 304 + 108979918 TTTTTTGCggccgggcacagtggctcatgcctgtaatcctagcactttgggaggccgaggcgggcagatcacaagttcaggagttcaagaccagcctggccagatggtgaaaccctgtctctactaaagatacaaaaaattagccgggcgtcatggcagacacctgtaatcccagcttcttgagaggctgaggcaggagaattgcctgaaacccaggaggcggaggttgcagtgagccgagat--catgcctctgcactccagcctgggtgacagagcgagactccgtctcagaaaaacaaa-aca--g i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1458287 304 - 111193037 TTTTTTGCggccgggcacagtggctcatgcctgtaatcctagcactttgggaggccgaggcgggcagatcacaagttcaggagttcaagaccagcctggccagatggtgaaaccctgtctctactaaagatacaaaaaattagccgggcgtcatggcagacacctgtaatcccagcttcttgagaggctgaggcaggagaattgcctgaaacccaggaggcggaggttgcagtgagccgagat--catgcctctgcactccagcctgggtgacagagcgagactccgtctcagaaaaacaaa-aca--g i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1486704 304 + 3644372 TTTTTTGCggccgggcacagtggctcatgcctgtaatcctagcactttgggaggccgaggcgggcagatcacaagttcaggagttcaagaccagcctggccagatggtgaaaccctgtctctactaaagatacaaaaaattagccgggcgtcgtggcagacacctgtaatcccagcttcttgagaggctgaggcaggagaattgcctgaaacccaggaggcggaggttgcagtgagccgagat--catgcctctgcactccagcctgggtgacagagcgagactccgtctcagaaaaacaaa-aca--g i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1440995 246 - 10304083 TTTTTTGCAGC----------------------------------------------------------CACAagttcaggagttcaagaccagcctggccagatggtgaaaccctgtctctactaaagatacaaaaaattagccgagtgtcatggcagacacctgtaatcccagcttcttgagaggctgaggcaggagaattgcctgaaacccaggaggcggaggttgcagtgagccgagat--catgcctctgcactccagcctggcagacagagcgagactccatctcagaaaaacaaa-aca--a i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1520936 304 - 107702431 TTTTTTGCggccgggcacagtggctcatgcctgtaatcctagcactttgggaggctgaggcgggcagatcacaagttcaggagttcaagaccagcctggccagatggtgaaaccctgtctctactaaaaatacaaaaacttagccgggcgtggtggcagacacctgtaatcccagcttcttgagaggctgaggcaggagaattgcctgaaaccgaggaggcagaggttgcagtgagccgagat--catgcctctacactccagcctgggtgacagagcgagactccatctcagaaaaacaaa-aca--a i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1013386 304 - 2200435 TTTTTTGCggccgggcacagtggctcatgcctgtaatcctagcactttgggaggccgaggcgggcagatcacaagttcaggagttcaagaccagcctggccagatggtgaaacccagtctctactaaaaatacaaaaaattagccgggcgtggtggcagacgcctgtaatcccagcttcttgagaggctgaggcaggagaattgcctgaaacccaggaggcggagcttgcagtgagccgagat--catgcctctgcactccagcctgggtgacagagcgagactccgtctcagaaaaacaaa-aca--a i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1443688 304 - 13651311 TTTTTTGCggccaggcacagtggctcatgcctgtaatcctagcactttgggaggccgaggcgggcagatcacaagttcaggagttcaagaccagcctggccagatggtgaaaccctgtctctactaaaaatgcaaaaaattagccgggcatggtggcagacacctgcaatcccagcttcttgagaggctgaggcaggagaattgcctgaaacgcaggaggcggaggttgcagtgagccgagat--catgcctctgcactccggcctgggtgacagagcgagactcaatctcagaaaaacaaa-aca--a i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 175655 0 + 287728 C e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1263245 0 - 7082604 C e cebCap1.NW_016107827v1 1357030 0 + 1864846 C e otoGar3.GL873658 954272 12 + 5252280 I e dasNov3.JH576208 1781329 9 + 4416731 I e calJac3.chr14 1434327 0 - 108792865 C a score=24221.000000 s hg38.chr2_KI270774v1_alt 173552 6 + 223625 aa---aaaC s panTro5.chr2A 1470337 6 + 111504155 aa---aaaC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1409535 6 + 114371477 aa---aaaC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1433331 6 + 1464242 aa---aaaC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1158435 6 + 81552678 aa---aaaC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1486167 9 + 108979918 aacagaaaC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1458591 9 - 111193037 aacagaaaC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1487008 9 + 3644372 aacagaaaC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1441241 9 - 10304083 aacagaaaC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1521240 9 - 107702431 aacagaaaC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1013690 9 - 2200435 aacagaaaC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1443992 9 - 13651311 aacagaaaC i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1781338 6 + 4416731 ---AAAGAT i dasNov3.JH576208 I 9 C 0 e aotNan1.NW_018513311v1 175655 0 + 287728 C e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1263245 0 - 7082604 C e cebCap1.NW_016107827v1 1357030 0 + 1864846 C e otoGar3.GL873658 954272 12 + 5252280 I e calJac3.chr14 1434327 0 - 108792865 C a score=14456.000000 s hg38.chr2_KI270774v1_alt 173558 2 + 223625 AC s panTro5.chr2A 1470343 2 + 111504155 AC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1409541 2 + 114371477 AC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1433337 2 + 1464242 AC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1158441 2 + 81552678 AC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1486176 2 + 108979918 AC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1458600 2 - 111193037 AC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1487017 2 + 3644372 AC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1441250 2 - 10304083 AC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1521249 2 - 107702431 AC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1013699 2 - 2200435 AC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1444001 2 - 13651311 AC i colAng1.NW_012118821v1 C 0 C 0 s aotNan1.NW_018513311v1 175655 2 + 287728 AC i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1781344 2 + 4416731 AG i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1263245 0 - 7082604 C e cebCap1.NW_016107827v1 1357030 0 + 1864846 C e otoGar3.GL873658 954272 12 + 5252280 I e calJac3.chr14 1434327 0 - 108792865 C a score=1365.000000 s hg38.chr2_KI270774v1_alt 173560 1 + 223625 T s panTro5.chr2A 1470345 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1409543 1 + 114371477 T i panPan2.chr2A C 0 C 0 s calJac3.chr14 1434327 1 - 108792865 T i calJac3.chr14 C 0 C 0 s aotNan1.NW_018513311v1 175657 1 + 287728 T i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1781346 1 + 4416731 T i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1263245 0 - 7082604 C e cebCap1.NW_016107827v1 1357030 0 + 1864846 C e otoGar3.GL873658 954272 12 + 5252280 I e colAng1.NW_012118821v1 1444003 0 - 13651311 C e manLeu1.NW_012103754v1 1013701 0 - 2200435 C e chlSab2.chr14 1521251 0 - 107702431 C e cerAty1.NW_012000820v1 1441252 0 - 10304083 C e macNem1.NW_012011978v1 1487019 0 + 3644372 C e macFas5.chr13 1458602 0 - 111193037 C e rheMac8.chr13 1486178 0 + 108979918 C e nomLeu3.chr19 1158443 0 + 81552678 C e gorGor5.CYUI01015607v1 1433339 0 + 1464242 C a score=4005.000000 s hg38.chr2_KI270774v1_alt 173561 1 + 223625 T s panTro5.chr2A 1470346 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1409544 1 + 114371477 T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1433339 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1158443 1 + 81552678 T i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1486178 1 + 108979918 C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1458602 1 - 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1487019 1 + 3644372 C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1441252 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1521251 1 - 107702431 C i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1013701 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1444003 1 - 13651311 C i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1434328 1 - 108792865 C i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1263245 1 - 7082604 T i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 175658 1 + 287728 C i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1781347 1 + 4416731 C i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1357030 0 + 1864846 C e otoGar3.GL873658 954272 12 + 5252280 I a score=62301.000000 s hg38.chr2_KI270774v1_alt 173562 7 + 223625 -TTTTTTG s panTro5.chr2A 1470347 7 + 111504155 -TTTTTTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1409545 7 + 114371477 -TTTTTTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1433340 7 + 1464242 -TTTTTTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1158444 7 + 81552678 -TTTTCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1486179 7 + 108979918 -TTTTTTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1458603 7 - 111193037 -TTTTTTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1487020 7 + 3644372 -TTTTTTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1441253 7 - 10304083 -TTTTTTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1521252 7 - 107702431 -TTTTTTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1013702 7 - 2200435 -TTTTCTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1444004 7 - 13651311 -TTTTTTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1434329 7 - 108792865 -TTCTTCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1263246 7 - 7082604 -CTTTTTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1357030 7 + 1864846 -TTTTTTG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 175659 7 + 287728 -TTTTTTG i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1781348 7 + 4416731 TTTCATT- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e otoGar3.GL873658 954272 12 + 5252280 I a score=5732603.000000 s hg38.chr2_KI270774v1_alt 173569 608 + 223625 -CATTCCCGTTTCTGCAGTGTCTCCCACAGGCAGGGACATCTAAAG-TGATGTTCTT-TCTTCCCAGCTCTGCGGCCTCTGAAGCTGTGATGAGCT----TCAGCCTCCATGTCTTTACCTCCTGCACAGGCC-TTGCATATTTTCCCTCTAGAGTTGGAAAAAGATGCAAATGTGTTTCCTCTTAGAGCAATAAGAAAGGAAATTACCCTTCTAACTTCGTTGTTTTTTCTTTTTGAAATT-AAGATTTCCATCTCTCACAGGTATT-----AGAAATGTTTTAATTATTTTGGACTACTTAAAACAGTTTGACAATGGTCTAAATTGACTATACAGAAACTTTC---TCTC--------CTCATTTGAGAACTTTAATTTGCTCATTATTTTGGTTTCTCACTAGTCTGAAAATAACTGcattcttttagtaaatatttaatgaaataactgctgtgtcccccaagccctgtggcaagcaatgggCGTC--TGTTTTCTATATAAACCA-----AGTGTCTACAGGTTACCTATTCCTGGAGC-TGAG-------------------------AAATTTGTGGGGTATGTTTGGGATGGTCTAGGCTACAGTAGATTGGGT------------GATAAAGATGAAATTTTGTTGGAGGTGC-----TGAGATGGAGAGACA s panTro5.chr2A 1470354 608 + 111504155 -CATTCCCGTTTCTGCAGTGTCTCCCACAGGCAGGGACATCTAAAG-TGATGTTGTT-TCTTCCCAGCTCTGCGGCCTCTGAAGCTGTGATGAGCT----TCAGCCTCCATGTCTTTACCTCCTGCCCAGGCC-TTGCATATTTTCCCTCTAGAGTTGGAAAAAGATGCAAATGTGTTTCCTCTTAGAGCAATAAGAAAGGAAATTACCCTTCTAACTTCGTTGTTTTTTCTTTTTAAAATT-AAGATTTCCATCTCTCGCAGGTATT-----AGAAATGTTTTAATTATTTTGGACTACTTAAAACAGTTTGACAATGGCCTAAATTGACTATACAGAAACTTTC---TCTC--------CTCATTTGAGAACTCTAATTTGCTCATTATTTTGGTTTCTCACTAGTCTGAAAATAACTGcattcttttagtaaatatttaatgaaataactgctgtgtcccccaagccctgtggcaggcaatgggCGTC--TGTTTTCTATATAAACCA-----AGTGTCTACAGGTTACCTATTCCTGGAGC-TGAG-------------------------AAATTTGTGGGGTATGTTTGGGATGGTCTAGGCTATAGTAGATTGGGT------------GATAAAGATGAAATTTTGTTGGAGGTGC-----TGAGATGGAGAGACA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1409552 607 + 114371477 -CATTCCCGTTTCTGCAGTGTCTCCCACAGGCAGGGACATCTAAAG-TGATGTTGTT-TCTTCCCAGCTCTGCGGCCTCTGAAGCTGTGATGAGCT----TCAGCCTCCATGTCTTTACCTCCTGCCCAGGCC-TTGCATATTTTCCCTCTAGAGTTGGAAAAAGATGCAAATGTGTTTCCTCTTAGAGCAATAAGAAAGGAAATTACCCTTCTAACTTCGTTG-TTTTTCTTTTTAAAATT-AAGATTTCCATCTCTCGCAGGTATT-----AGAAATGTTTTAATTATTTTGGACTACTTAAAACAGTTTGACAATGGCCTAAATTGACTATACAGAAACTTTC---TCTC--------CTCATTTAAGAACTCTAATTTGCTCATTATTTTGGTTTCTCACTAGTCTGAAAATAACTGcattcttttagtaaatatttaatgaaataactgctgtgtcccccaagccctgtggcaggcaatgggCGTC--TGTTTTCTATATAAACCA-----AGTGTCTACAGGTTACCTATTCCTGGAGC-TGAG-------------------------AAATTTGTGGGGTATGTTTGGGATGGTCTAGGCTATAGTAGATTGGGT------------GATAAAGATGAAATTTTGTTGGAGGTGC-----TGAGATGGAGAGACA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1433347 605 + 1464242 -CATTCCCGTTTCTGCAGTGTCTCCCACAGGCAGGGACATCTGAAG-TGATGTTGTT-TCTTCCCAGCTCTGCGGCCTCTGAAGCTGTGATGAGCT----TCAGCCTCCATGTCTTTACCTCCTGCCCAGGCT-TTGCATATTTTCCCTCTAGAGTTGGAAAAAGATGCAAATGTGTTTCCTCTTAGAGCAATAAGAAAGGAAAATACCCTTCTAACTTCGTTG-TTTTTCTTTTTAAAATT-AAGATTTCCATCTCTCACAGGTATC-----AGAAATGTTTTAATTATTTTGGACTACTGAAAACAGTTTGACAATGGTGTAAATTGACTATACAGAAACTTTC---TCTC--------CTCATTTGAGGACTTTAATTTGCTCATTATTTTGGTTTCTCACTAGTCTGAAAATAACTGcattcttttagtaaatatttaatgaaataactgctgtgtcccccaagccctgtgacaggcaatgggCGTC--TGTTTTCTATATAAACCA-----AGTGTCTACAGGTTACCTATTCCTGGAGC-TGAG-------------------------AAATTTGTGGGG--TGTTTGGGATGGTTTAGGCTACAGTAGATTGGGT------------GATAAAGATGAAATTTTGTTGGAGGTGC-----TGAGGTGGAGAGACA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1158451 600 + 81552678 -CATTCCTGTTTCTGCGGTGTCTCCCACAGGCAGGGACATCTGAAG-TGATGTTGTT-TCTTCCCAGCTCTGTGGCCTCTGGAGCTGTGATGAGCT----TCAGCCTCCATGT------CTCCTTCCCAGGCC-TTGCACGTTTTCCCTCTAGAGTTGGAAAAAGATGCAAATATGTTTCCTCTTAGAGCAATAAGAAAGGAAAATACCCTTCTAACTTCGTTATTTTTTCTTTTTAAAATT-AAGATTTCCATCTCTCACAGGTATT-----AGAAATGGTTTAATTATTTTGGACTACTT-AAACAGTTCGACAGTGGTCTAAAATGACTATATAGAAACTTTC---TCTC--------CTCATTTCAGAACTTTAATTTGCTCATTATTTTGGTTTCTCACTAGTCTGAAAATAACTG-attcttttagtaaatatttagtgaaataactgctgtgtccgccaagccctgtggcaagcaatgggCGTC--TGTTTTCTATATAAACCG-----AGTGTCTACAGGTTACCTGTTCCTGGAGC-TGAG-------------------------AAGTTTGTGGGGTATGTTTGGGATGGTCTAGGCTAAAGTAGATTGCGG------------GATAAAGATGACATTTTGTTGGAGGTGC-----TGAGGTGGAGAGACA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1486186 594 + 108979918 -CATTCCCGTTTCTGCGGTGTCTCCCACAGGCAGGGACATCCGAAG-TGATGTTGTT-CCTTCCGGGGTCTGTGGCCTCCGGAGCTGTGAAGAGCT----TCAGCCTCCATGTCTTTACCTCCTTCCCAGACC-TTGCACATTTTCCCTCTAGAATTGGAAAAAGATGCAAATATGTTTCCTCTCAGAGCAATAAGAAAGGAAAATGCCCTCCTAACTTCGTTGTTTTTTCTTTTTAAAATT-AAGATGTCAATCTCCCACAGGTGT------GAAAATGCTTTTATTGT-----ACTAATTAAAACAGTTTGACAATGGTCTAAATTGTCAGTATAGAAAC---C---TCTC--------CTCGTTTTAGAATTTTAATTTGCTCATTATTTTTGTTTTTGACTAGTCTGAAAATAAATGCATTCTTTTAGTAAATA-------AAATAACGGCTGTGTCCCCCAAGCCCTGTGGCAAGCAATGGGCATCTGTGTTTTCTATATAAACCG-----AGTGTCTACAGGTTGCCTGTTACTGGAGC-TGAG-------------------------aaattcgtggggtatgtttgggatggtctaggctaaagtagactgtgt------------gataaagatgaaattTTGTTGGAGGTGC-----TGAGTTGGAGGGACA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1458610 594 - 111193037 -CATTCCCGTTTCTGCGGTGTCTCCCACAGGCAGGGACATCCGAAG-TGATGTTGTT-CCTTCCGGGCTCTGTGGCCTCCGGAGCTGTGAAGAGCT----TCAGCCTCCATGTCTTTACCTCCTTCCCAGACC-TTGCACATTTTCCCTCTAGAATTGGAAAAAGATGCAAATATGTTTCCTCTCAGAGCAATAAGAAAGGAAAATGCCCTCCTAACTTCGTTGTTTTTTCTTTTTAAAATT-AAGATGTCAATCTCCCACAGGTGT------GAAAATGCTTTTATTGT-----ACTAATTAAAACAGTTTGACAATGGTCTAAATTGTCAGTATAGAAAC---C---TCTC--------CTCGTTTTAGAATTTTAATTTGCTCATTATTTTTGTTTTTGACTAGTCTGAAAATAAATGCATTCTTTTAGTAAATA-------AAATAACGGCTGTGTCCCCCAAGCCCTGTGGCAAGCAATGGGCATCTGTGTTTTCTATATAAACTG-----AGTGTCTACAGGTTGCCTGTTACTGGAGC-TGAG-------------------------ACATTCGTGGGGTATGTTTGGGATGGTCTAGGCTAAAGTAGACTGTGT------------GATAAAGATGAAATTTTGTTGGAGGTGC-----TGAGTTGGAGGGACA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1487027 594 + 3644372 -CATTCCCGTTTCTGCGGTGTCTCCCACAGGCAGGGACATCCGAAG-TGATGTTGTT-CCTTCCGGGCTCTGTGGCCTCCGGAGCTGTGAAGAGCT----TCAGCCTCCATGTCTTTACCTCCTTCCCAGACC-TTGCACATTTTCCCTCTAGAAATGGAAAAAGATGCAAATATGTTTCCTCTCAGAGCAATAAGAAAGGAAAATGCCCTCCTAACTTCGTTGTTTTTTCTTTTTAAAATT-AAGATGTCAATCTCCCACAGGTGT------GAAAATGCTTTTATTGT-----ACTAATTAAAACAGTTTGACAATGGTCTAAATTGTCAGTATAGAAAC---C---TCTC--------CTCGTTTTAGAATTTTAATTTGCTCATTATTTTTGTTTTTGACGAGTCTGAAAATAAATGCATTCTTTTAGTAAATA-------AAATAACGGCTGTGTCCCCCGAGCCCTGTGGAAAGCAATGGGCATCTGTGTTTTCTATATAAACCG-----AGTGTCTACAGGTTGCCTGTTACTGGAGC-TGAG-------------------------aaattcgtggggtatgtttgggatggtctaggctaaagtagactgtgt------------gataaagatgaaattttgttggaggtgc-----tgagttggagggaca i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1441260 601 - 10304083 -CATTCCCGTTTCTGCGGTGTCTCCCACAGGCAGGGACATCCGAAG-TGA---TGTT-CCTTCTGGGCTCTGTGGCCTCCGGAGCTGGGAAGAGCT----TCAGCCTCCATGTCTTTACCTCCTTCCCAGATC-TTGCACATTTTCCCTCTAGAGTTGGAAAAAGATACAAATATGTTTCCTCTCAGAGCAATAGGAAAGGAAAATGCCCTCCTAACTTCGTTGTTTTTTCTTTTTAAAATT-AAGATGTCAATCTCCCACAGGTGT------GGAAATGCTTTTCTTGT-----ACTAATTAAAACAGTTTGACGATGGTCTAAATTGTCGGTATAGAAACCTTC---TCTC--------CTCGTTTTAGAACTTTAATTTGCTCATTATTTTTGTTTTTGACTAGTCTGAAAATAAatgcattcttttagtaaatatttaatgaaataacggctgtgtgccccaagccctgtggcaagcaatgggCATCTGTGTTTTCTGTATAAACCG-----AGTGTCTACAGGTTGCCTGTTACTGGAGC-TGAG-------------------------AAATTCGTGGGGTATGTTTGGGATGGTCTAGGCTAAAGTAGATTGTGT------------GATAAAGATGAAATTTTGTTGGAGGTGC-----TGAGTTGGAGGGACA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1521259 599 - 107702431 -CATTCCCGTTTCTGCAGTGTTTCCCACAGGCAGGGACATCCGAAG-TGATGTTGTT-TCTTCCGCGCTCTGTGGCCTCTGGAGCTGTGAAGAGCT----TCAGCCTCCATGTCTTTACCTCCTTCCCAGACC-TTGCACATTTTCCCTCTAGAGTTGGAAAAAGATGCAAATATGTTTTCTCTCAGAGCAATAAGAAAGGTAAATGCCCTCCTAACTTCGTTGTTTTTTTTTTT--AAATT-AAGATGTCAATCTCCCACAGGTGT------GGAAATGCTTTTATTGT-----ACTAATTAAAACAGTTTGACGATGGTCTAAATTGTCGGTATAGAAAC---C---TCTC--------CTCGTTTTAGAACTTTAATTTGCTCATTATTTTTGTTTTTGACTAGTCTGAAAATAAatgcattcttttagtaaatatttaatgaaataacggctgtgtcccccaagccctgtggcaagcaatgggCATCTGTGTTTTCTGTATAAACCG-----AGTGTCCACAGGTTGCCTGTTACTGGAGC-TGAG-------------------------aaatttgtggggtatatttgggatggtctaggctaaagtatactgtgt------------gataaagatgaaattTTGTTGGAGGTGC-----TGAGTTGGAGGGACA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1013709 602 - 2200435 -CATTCCCGTTTCTGCGGTGTCTCCCACAGGCAGGGACCTCCGAAG-TGATGTTGTT-TCTTCCGGGCTCTGTGGCCTCCggagctgtgaagagct----tcagcctccacgtctttacctccttcccagacc-ttgcacattttccctccagagttgggaaaagatgcaa--atgtttcctctcagagcaataggaaagGAAAATGCCCTCCTAACTTCGTTGTTTTTTCTTTTTAAAATT-AAGATATCAATCTCCCACAGGTGT------GGAAATGCTTTTATTGT-----ACTAATTAAAACAGTTTGAAGATGGTCTAAATTGTCGGTATAGAAAC---CTTTTCTC--------CTCATTTTAGAACTTTAATTTGCTCATTATTTTTGTTTTTGACTAGTCTGAAAATAAatgcattcttttagtaaatatttaatgaaataacggctgtgtcccccaagccctgtggcaagcaatgggCATCTGTGTTTTCTGTATAAACCA-----AGTGTCTACAGGTTGCCTGTTACTGGAGC-TGAG-------------------------AAATTCGTGGGGTATGTTTGGGATGGTCTAGGCTAAAGTAGATTGTGT------------GATAAAGATGAAATTTTGTTGGAGGTGC-----TGAGTTGGAGGGACA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1444011 604 - 13651311 -CATTCCTGTTTCTGCGATGTCTCCCGCAGGCAGGGACATCTGAAG-TGATGTTGTT-TCTTCCGGGCTCTGTGGCCTCCGGAGCTGTGAAGAGCT----TCAGCCTCCATGTCTTTACCTCCTTCCCAGACC-TTGCACATTTTCCCTCTAGAGCTGGAAAAAGATGCAAATACGTTTCCTCTTAGAGCAATAAGAAAGGAAAATGCCCTCCTAACTTCGTTGTTTTTTCTTCTTAAAATT-AAGATGTCAATCTCCCACAGGTGT------GGAAATGTTTTTATTGT-----ACTAATTAAAACAGTTTGACGATGGTCTAAATTGTCAGTATAGAAACCTTC---TCTC--------CTCGTTTTAGAACTTTAATTTGCTCATTATTTTTGTTTTTGACTAGTCTGAAAATAAatgcattcttttagtaaatatttaatgaaataacggctgtgtcccccaagccctgtggcaagcaatgggCATCTGTGTTTTCTATATAAACCG-----AGTGTCTACAGGTTGCCTGTTACTGGAGC-TGAG-------------------------AAATTCGTGGGGTATGTTTGGGATGGTCTAGGCTAAAGTAGATTGTGT------------GATAAAGATGAACTTTTGTTGGAGGTGC-----TGAGTTGGAGGGACA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1434336 606 - 108792865 -CATTCCCATTTCTGCAGCGTCTCCCACAGGCCGGGACAGCTGAGGTTGCTGTTGAT-TCTTCCCTGCTC--TGGGCTCTGGAGCTGCGATGAGATTGACTCA--CTTCCTGCCTTTACCTCCTGCCCAGGCCTCTGCACATTTTCCCTGTAGAGCTGGAAAAAGTTGCAAATGTGTTTCCTCTTAGAGCAGTAAGAAAGGAAAACACCCTCCTAACTTTGC---TGTTTCGTTTTAAAATT-AAAATATCAGTCTCCCACGGGTATG-----GGAAATGTTTCTATTACTTTGTTCTACTTAAAACAGTTTGACAGTGGTCTAACTTGATTATATAGAAACTTTC---T-CC--------CTCATTCTAGAGCTTTAATTCACTCATTATTTTGGTTTTTGACTAATCTGAAAATGAATGCATTCTTTTAACAAATATTTAATGAAATTACTGCTCTGTCCCCCAAGCCCTGTGGCAAGCAACGGGCCTCTGTGTTTTCCGTATAAACCC-----AGTGTCTCCAGGTGACCTGTTACTGGATC-TGAG-------------------------AAACGTGCGGGGTGTGTTTGGGATGGTCTGGG-TAAAGCAGACTGCAT------------GGCAAAGAGGAAATGTTGTTGAAGGTGC-----TGAGGTGG-GAGACA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1263253 606 - 7082604 -CATTCCCGTTTCTGCGGTGTCTCCCACAGGCAGGGACATCTGAGTTTGGTGCTCAT-GCTTCCCGGCTCTGTGGGCTCTGGAGCTGGGATGAGGTTGAGTCACCCTTCCCGCCTTTACCTCCTGCCCAGGCC-CTGCACATTTTCCCTCTAGAGCTGGAAAAAGTTGCAAATGTGTTTCCTCTTAGAGCAGTAAGAAACAATAACACCCTCCTAACTTTGC---TTTTTCTTTTT-AAATT-AAAGTATCAATCTCCCATGGGTATT-----GGAAATGTTTTTATTATTTTGTTCTACTTAGAACAGTTTGACAGTGGTCTAACTTGATTATGTGGAAACTGTC---TCCC--------CTCATTTTAGAACTTTAATTCACTC---ATCTTGGTTTTTGACTAATCTTAAAATGAatgcattcctttaacaaatatttaatgaaattactgctgtgtcccccaagccctgcgacaagcagtgggCCTCTGTGTTTTCTGTATAAACCA-----AGTGTCTCCAGGTGACCTGTTACTGGATC-TGAG-------------------------AAACGCGTGGGGTGTGTTTGGGATGGTCTGGG-TAAAGCAGACTGCAT------------GGTAAAGAGGAAATGCTGTTGAAGGTGC-----TAAGGTCG-GAGACA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1357037 608 + 1864846 -CATTCCCGTTTCTGCAGCCTCTCGCACAGGCAGGGACATCTGAGGTTGGTATTGAT-TCTTCCCGGCTCTGTGGTCCCTGGAGCTGCGATGTGATTGATTCACCCTTCCTACCTTTACTTCCTGCCCAGGCC-TTGCACATTTTCCCTCTAGAGCTGGAAAAAGTTGCCAATGTGTTTCTCCTTAGAGCAATAAGAAAGGAAAACACACTCCTAACTTTGC---TTTTTCTTTTTAAAATT-GAAATATCCGTCTCCCACGGGTATT-----AGAAATGTTTTTATTATTTTGTTCTACTTAAAACAGTTTGACAATGGTCTAACTTGATTATATAGAAACTTTC---TCCC--------CTCATTTTAGAACTTTAATTCACTCATCATTCTGGTTTTTGACTAATCTGAAAATGAatgcattcttttaacaaatatttaatgaaatttctgctgtgttccccaagccctgtggcaagcagtgggCTTC--TGTTTTCTGTATAAACCA-----AGTGTCTCCAGGTGACCTCTTACTGTATC-TGAG-------------------------AAATGTGTGGGGTGTGTTTGGGATGGTCTGGG-TAAAGCAGACTGCAT------------GGTAAAGAGGAAATGTTGTTGAAGGTGC-----TGAGGTCG-GAGACA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 175666 617 + 287728 -CATTCCCGTTTCTGCAGCGTCTCCCACAGGCAGGGACATCTGAGGTTGATGCTGAT-TCTTCCCAGCTCTCTGGGCTCTGGAGCTGCGATGAGATTGATTCACACTTCCTGTCTCTACCTCCTGCCCAGGCC-TGGCACATTTTCCCTCTAGAGGTGGAAAAAGTTGCAAATGTGTTTCCTCTTAGAGCAATAAGAAAGGAAAACACCCTCCTAACTTCGC---TTTTTCTTTTA-AAATT-AAAATATCAATCTCCCACAGGTATT-----AGAAATGTTTTTATTATTTTGTTCTACTTAAAACAGTTTGACAGTGGTCTAACTTGATTATATAGAAACTTTC---TCCCCTCATTTTCTCATTTTAGAACTTTAATTCGCTCATCATTTTGGTTTTTGGCTGATCTGAAAATGAatgcattcttttaacaaatatttaatgaaattactgctgtgtcccccaagccctgtggcaagcaatgggCCTCTGTGTTTTCTGTATAAACCG-----AGTGTCTCCAGGTGACCTGTTACTGGATC-TGAG-------------------------AAACGTGTGGGGTGTGTTTGGGATGGTCTGGG-TAAAGCTGACTGCAT------------GGTAAAGAGGAAATGTTGTTGAAGGTGC-----TGAGGTCG-GAGACA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 954284 560 + 5252280 -CGTTCCCGCCCCTG---TTCTTCACACGGGCAGGGATATCTGAAC-CCCTGTCGT-------------------CCTCCCACGCCCTGACAATGT-------CCCTCCCTGTCTC-GCCGGGTGTCCAGACA-GCACACATTTTCTCTCTGGAGTTGGAAAAGGATAAAAATACATTTCCTCTTAGAGCAATAAGAAAGGAAAATGCTTTTCTAACTTT-----TTATTCTTTTTAAAAGT-AAGGCACCAATCTCCCACAGGTAC------TGAAAGGTTTTCATTAGGTTTTACTACTTGGAATAGTTTGGAGGTGGTT---GTTATTGCTATAGAAACATTC----CCC--------CTAATTTTAGAACTTTAATTTACTCAATACTTTGGGGTTTGATTATCCTGAAGATAAatgcactctttcagcaaagatttggtgaaataactgcta-------cagtccctgtggcaggcagtggggacatgca-tttctgcataagccagacgcagtgcttCCATGCCATCTGTCCCCAGACCATAAG-------------------------AAATTTGGAGGATGTGCTTGGG-TGGTATGTCCTGACACCAACTGTGA---------------AAACATGAACTGCCACTGG-----------TGGGTTGGGGGG--- i otoGar3.GL873658 I 12 C 0 s dasNov3.JH576208 1781355 628 + 4416731 TCTTCCCCTCTTCTA-----TCTTACGTAAACAGGGGCCTCTGAAATCAATGTTTATAAATTCCTAGATTTGCAGTCTGGTGAGCTCTGGCACAGT----TTAC--------TTTTTAAAATATTCCCAGACA-TCTCACATTTTCTTTCTGGAGTTGT---AAGATATGAATGCATTCTCTCTTGAAGCAATAAAAAAGGAAAATATTTTTCTGATTT------TTTTTCTGTGTGAAACTCAAAGCCTCAATCTCATACTGGTACTGGTACTGaaaaatttttattattttttaCTGTTTAAAATACTTTGAAGATGGTCTATATTA---GTATA-AAATTTTC---TCCC--------CTAAATCTAGAACTTTCATTCCCTCATTGTTTTAAGTTTAAAATATCCTGAAAATCAACACATTCCTACAGCAAATATTCACTGAAGTAAATACTATGTTCCCCAAGCACT----------AGGAACATT--TATTTtctgtataaaccaaattgagtgtttttatttcatctgttagtaaatc-aggggaaaataactggatggattttcaccaaattggttgagtatgtttagaatgaactggcctaaaatagactatgtCATAAACAATGTGATAAAGATGAAATACCAGTGGTGGTGCCAGAGTGTGAGGAAGGGGCA i dasNov3.JH576208 C 0 I 844 e mm10.chr12 90030866 3028 - 120129022 I a score=1161760.000000 s hg38.chr2_KI270774v1_alt 174177 133 + 223625 CAGA-GCCTCTTGAC-GGGGCAAAGCAC---TTCCC----GGTGGCTTTGATGAGAGGGCTGGGATGGCCCATCTGGAGACAGAAAACGAGAGTGG---TTTCTGCAGATCACAGGGCGGC-----------------------------------------AGAGCCCA-CTGTGGACAGCAGGAG--- s panTro5.chr2A 1470962 134 + 111504155 CAGGTGCCTCTTGAC-GGGGCAAAGCAC---TTCCC----GGTGGCTTTGATGAGAGGGCTGGGATGGCCCATCCGGAGACAGAAAACGAGAGTGG---TTTCTGCAGATCACAGGGCGGC-----------------------------------------AGAGCCCA-CCGTGGACAGCAGGAG--- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1410159 134 + 114371477 CAGGTGCCTCTTGAC-GGGGCAAAGCAC---TTCCC----GGTGGCTTTGATGAGAGGGCTGGGATGGCCCATCCGGAGACAGAAAACGAGAGTGG---TTTCTGCAGATCACAGGGCGGC-----------------------------------------AGAGCCCA-CCGTGGACAGCAGGAG--- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1433952 134 + 1464242 CAGGTGCCTCTTGAC-GGGGCAAAGCAC---TTCCC----GGTGGCTTTGATGAGAGGGCTGGGATGGCCCATCCAGAGACAGAAAACGAGAGTGG---TTTCTGCAGATCACAGGGCGGC-----------------------------------------AGAGCCCA-CTGTGGACAGCAGGAG--- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1159051 134 + 81552678 CAGGTGCCTCTTGAC-GGGGCAAAGCAC---TTCCC----GGTGGCTTTGATGAGAGGGCTGCGATGGCCCATTTGGAGAGAGAAAACGAGAGTGG---TTTCTGCAGATCACAGGGCGGC-----------------------------------------AGAGCCCA-CTACGGACAGCAGGAG--- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1486780 132 + 108979918 CAGGTGCCTCTTGAC-CGGGCAAAGCAC---CTCTG----GGTGGCTTTGATGAAAGGGTCAGGATGGCCCATCTGGAAACAGAAAATAAGAGTGG---TTTCTGCAGAT-ACAGGGCAGC-----------------------------------------AGAG-CCA-CTGCGGACAGCAGGAG--- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1459204 132 - 111193037 CAGGTGCCTCTTGAC-GGGGCAAAGCAC---CTCCC----GGTGGCTTTGATGAAAGGGCCAGGATGGCCCATCTGGAAACAGAAAATAAGAGTGG---TTTCTGCAGAT-ACAGGGCAGC-----------------------------------------AGAG-CCA-CTGCGGACAGCAGGAG--- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1487621 132 + 3644372 ccGGTGCCTCTTGAC-GGGGCAAAGCAC---CTCCC----GGTGGCTTTGATGAAAGGGCCAGGATGGCCCATCTGGAAACAGAAAATAAGAGTGG---TTTCTGCAGAT-ACAGGGCAGC-----------------------------------------AGAG-CCA-CTGCGGACAGCAGGAG--- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1441861 132 - 10304083 CCGGTGCCTCTTGAC-AGGGCAAAGCAC---CTCCC----GGTGGCTTTGATGAAAGGGCCAGGATGGCCCATCTGGAAACAGAAAATAAGAGTGG---TTTCTGCAGAT-ACAGGGCAGC-----------------------------------------AGAG-CCA-CTGCGGACAGCAGGAG--- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1521858 173 - 107702431 CAGGTGCCTCTTGAT-GGGGCAAAGCAC---CTCCC----GGCGGCTTTGATGAAAGGGCCAGGATGGCCTATCTGGAGACAGAAAACGAGGGTGG---TTTCTGCAGAT-ACAGGGCAGCATCTGCCGATCACAGGCAGCATCTGCTGATCACAGGGCAGTAGAG-CCA-CTGCGGACAGCAGGAG--- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1014311 132 - 2200435 CAGGTGCCCCTTGAT-GGGGCAAAGCAC---CTCCC----GGTGGCTTTGATGAAAGGGCCAGGATGGCCCATCTGGAAACAGAAAATAAGAGTGG---TTTCTGCAGAT-ACAGGGCAGC-----------------------------------------AGAG-CCA-CTGCGGACAGCAGGAG--- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1444615 133 - 13651311 CAGGTGCCTCTTGAT-GGAGCAAAGCAC---CTCCT----GGTGGCTTTGATGAAAGGGCCAGGATGGCCCATCTGGAGACAGAAAACAAGAGTAG---TTTCTGCAGATCACAGGGCAGC-----------------------------------------AGAG-CCA-CTGCAGACAGCAGGAG--- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1434942 137 - 108792865 CAGGGGCCTCTTGGCGGGGGCAAAGCACCTCCTCCC----AGTGGCTCTGATGAGA-GGCTGGGATGGCGCATCTGGAGACAGAAAACCAGTGTGG---TTCCTGCAGATCACAGGGCGGC-----------------------------------------AGAGCCCA-CCACAGACAGCAGGAG--- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1263859 135 - 7082604 CAGGGGCCTCTTGTTGGGGGCAAAGCACCTTCTCCT----GGTGGCTTTGATGAGA-GGCTGGGATGGCCCGTCTGGAGACAGAAAACCAATGTGG---TTCCTGCAG--CACCGGGCGGC-----------------------------------------AGAGCCCA-CCGCAGACAGCAGGAG--- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1357645 137 + 1864846 CAGGGGCCTCTTGTGGGGGGCAAAGCACCTCCTTCT----GGTGGCTTTGGTGAGA-GGCTGGGATGGCCCGTCTGGAGACAGAAAACCAGTGTGG---TTCCTGCAGATCACAGGGCGGC-----------------------------------------AGAGCCCA-CCGCAGACAGCAGGAG--- i cebCap1.NW_016107827v1 C 0 I 275 s aotNan1.NW_018513311v1 176283 137 + 287728 CAGGGGCCTCTTGGGGGGGGCATGGCACCTCCTCCC----GGTGGCTTTGATGAGA-GGCTGCGATGGCCCATCTGGAGACAGAAAACCAGTGTGT---TTCCTGCAGATCACAGGGCGGC-----------------------------------------AGAGCCCA-CCACAGACAGCAGGAG--- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 954844 135 + 5252280 -------CTCTGGGA-GGGGTTGGTGAC---TTCCCCCTGGGTGACTCCAAAGAGG-AGCTGGGCTGGCCCAGCTGGGAGCAG-GGACTAGAGTGACCCTGCCTTGGGGTCACAGGGCTG------------------------------------------AGAGCCCACCTGCCTCCCACAGGCAGAT i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e dasNov3.JH576208 1781983 844 + 4416731 I a score=187113.000000 s hg38.chr2_KI270774v1_alt 174310 23 + 223625 TCAGGCTGAGGCAGCGCAGCTTC s panTro5.chr2A 1471096 23 + 111504155 TCAGGCTGAGGCAGCGCAGCTTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1410293 23 + 114371477 TCAGGCTGAGGCAGCGCAGCTTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1434086 23 + 1464242 TCAGGCTGAGGCAGCGCAGCTTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1159185 23 + 81552678 TCAGGCTGAGGCAGCGCAGCTTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1486912 23 + 108979918 TCAGGCTGAGGCAGCACAGCTTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1459336 23 - 111193037 TCAGGCTGAGGCAGCACAGCTTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1487753 23 + 3644372 TCAGGCTGAGGCAGCACAGCTTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1441993 23 - 10304083 TCAGGCTGAGGCAGCACAGCTTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1522031 23 - 107702431 TCAGGCTGAGGCAGCACAGCTTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1014443 23 - 2200435 TCAGGCTGAGGCAGCACAGCTTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1444748 18 - 13651311 TCAGGCTGCGG-----CAGCTTC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1435079 23 - 108792865 CTGGGCAGAGGCAGCGCACCGTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1263994 23 - 7082604 CTGGGTGGAGGCAGCGCACCTTC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 176420 23 + 287728 CTGGGCGGAGGCAGCGCACCTTC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 954979 23 + 5252280 GTTGGCTGAGGCAGAGGAACATC i otoGar3.GL873658 C 0 I 81 e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1357782 275 + 1864846 I e dasNov3.JH576208 1781983 844 + 4416731 I a score=946655.000000 s hg38.chr2_KI270774v1_alt 174333 129 + 223625 TCACGGGGGCTCGGGGGAACCCTTGCCAGATGTGGAAGCACCAGGGCTACGGGGCCAGCCAAGGCAGGTGACTCTAGGAGCACAAGAGTCAGACACACACTTGTTCCTCCTGAGGGTGAACCAGGGAG--------C s panTro5.chr2A 1471119 129 + 111504155 TCACGGGGGCTCGGGGGAACCCTTGCCAGATGCAGAAGCACCAGGGCTACGGGGCCAGCCAAGGGGGGTGACTCTAGGAGCACAAGAGTCAGACACACACTTGTTCCTCCTGAGGGTGAACCAGGGAG--------C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1410316 129 + 114371477 TCACGGGGGCTCGGGGGAACCCTTGCCAGATGCAGAAGCACCAGGGCTACGGGGCCAGCCAAGGGGGGTGACTCTAGGAGCACAAGAGTCAGACACACACTTGTTCCTCCTGAGGGTGAACCAGGGAG--------C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1434109 129 + 1464242 TCATGGGGGCTCGGGGGAACTCTTGCCAGATGCAGAAGCACCAGGGCTACGGGGCCAGCCAAGGGGGGTGACTCTAGGAGCACAAGAGTCAGACACACACTTGTTCCTCCTGAGGGTGAACCAGGGAG--------C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1159208 129 + 81552678 TCACGGGGGCTGGGGGGAACCCTTGCCAGACGCAGCAGTGCCAGGCCTATGGGGCCAGCCAAGGGGGGTGACTCTAGCAGCACAAGAGTCAGACACACACTTGTTCCTCCTGATGGTGAACCAGGGAG--------C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1486935 137 + 108979918 TCATGGGGGATCAGGGGATCCCCTGCCAGATGCAGCAGCACCAGGGCTGTGGGGCCAGCCAAGGGGGGTGACTCTAGGAGCACAAGAGTCAGACACACACGGGTTCCTCCTGACGGTTAACCAGGGAAATGGCTCTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1459359 137 - 111193037 TCATGGGGGATCAGGGGATCCCCTGCCAGATGCAGCAGCACCAGGGCTGTGGGGCCAGCCAAGGGGGGTGACTCTAGGAGCACAAGAGTCAGACACACACGGGTTCCTCCTGACGGTTAACCAGGGAAATGGCTCTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1487776 137 + 3644372 TCATGGGGGATCAGGGGATCCCCTGCCAGATGCAGCAGCACCAGGGCTGTGGGGCCAGCCAAGGGGGGTGACTCTAGGAGCACAAGAGTCAGACACACACGGGTTCCTCCTGACGGTTAACCAGGGAAATGGCTCTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1442016 136 - 10304083 TCATGGGGGATCAGGGGATCCCCTGCCAGATGCAGCAGCACCAGGGCTGTGGGGCCAGCCAAGGGGGGTGACTCTAGGAGCACAAGAGTCAGACACACAC-GGCTCCTCCTGACGGTTAACCAGGGAAATGGTTCTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1522054 137 - 107702431 TCATGGGGGATCAGGGGATCCCCTGCCAGATGCAGTAGCACCAGGGCTGTGGGGCCAGCCAAGGGGGGTGACTCTAGGAGCACAAGAGTCAGACACACACGGGCTCCTCCTGACGGTTAACCAGGGAAATGGTTCTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1014466 136 - 2200435 TCATGGGGGATCAGGGGATCCCCTGCCAGATGCAGCAGCACCAGGGCTGTGGGGCCAGCCAAGGGGGGTGACTCTAGGAGCACAAGAGTCAGACACACAC-GGCTCCTCCTGACGGTTAACCAGGGAAATGGTTCTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1444766 137 - 13651311 TCATGGGGGATCAGGGGATGCCCTGCCAGATGCAGCAGCACCAGGGCTGTGGGGCCAGCCAAGGGGGGTGACTCTAGGAGCACAAGAGTCAGACACACACTGGTTCCTCCTGACAGTTAACCAGGGAAATGGTTCTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1435102 118 - 108792865 TCACGGGGGCTCAGGGGACTGTTGG--GCATGCAGCAGCACCAGGGCTTCGGGGCCAGCCAAGGGGGGTGAC-CTGGGAGCCCAGGAGTG--------ACTTGTTCCTCCCAACCGTGAATCAGGGAG--------C i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1264017 125 - 7082604 TCACGGGGGCTCAGGAGACTGTTGG--GGACGCAGCAGCACCAGGGCTGTGGGGCCAGCCAA-GGGGATGCC-CTGGGAGCCCAGGAGTGGGGCGCACACTTGTTCCTCCCAACCGTGAATCAGGGGG--------C i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 176443 126 + 287728 TCAGGGGGACTCAGGGGACTGCGGG--GGATGCAGCAGCACCAGGGCTGCGGGGCCAGCCGAGGGGGGTGAC-CTGGGAGCCCAGGAGTGAGGCGCACACTTGTTCCTCCCAACCGTGAACCAGGGAG--------C i aotNan1.NW_018513311v1 C 0 I 45 e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1357782 275 + 1864846 I e otoGar3.GL873658 955002 81 + 5252280 I e dasNov3.JH576208 1781983 844 + 4416731 I a score=344248.000000 s hg38.chr2_KI270774v1_alt 174462 52 + 223625 CACCTGCTAAGAAATGGACTCAATGGCACCTGACAGCAGTTTTCTAAAAGCT s panTro5.chr2A 1471248 52 + 111504155 CACCTTCTAAGAAATGGACTCAATGGCACCTGACAGCAGTTTTCTAAAAGCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1410445 52 + 114371477 CACCTTCTAAGAAATGGACTCAATGGCACCTGACAGCAGTTTTCTAAAAGCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1434238 52 + 1464242 CACCTTTTAAGAAATGGACTCAATGGCACCTGACAGCAGTTTTCTAAAAGCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1159337 52 + 81552678 CGCCCTTTAAGAAATGGACTCAATGGCACCTGACAGCAGTTTTCTGAAAGCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1487072 52 + 108979918 AGCCCGCTAAGAAATGGACTCAATAGCACCTGACAGCAGTTTTCTAAAAGCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1459496 52 - 111193037 AGCCCGCTAAGAAATGGACTCAATAGCACCTGACAGCAGTTTTCTAAAAGCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1487913 52 + 3644372 AGCCCGCTAAGAAATGGACTCAATAGCACCTGACAGCAGTTTTCTAAAAGCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1442152 52 - 10304083 AGCCCTCTAACAAATGGACTCAATAGCACCTGACAGCAGTTTTCTAAAAGCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1522191 51 - 107702431 AGCCCGCTAAGAAATGGA-TCAATAGCACCTGACAGCAGTTTTCTAAAAGCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1014602 52 - 2200435 AGCCCTCTAACAAATGGACTCAATAGCACCTGACAGCAGTTTTCTAAAAGCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1444903 52 - 13651311 AGCCTTCTAAGAAATGGACTCAATAGCACCTGACAGCAGTTTTCTAAAAGCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1435220 49 - 108792865 TGCCCTTTAAGAGAGAG--TCCATGGCACCTGACAGCAG-TTTCTGAAAGTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1264142 51 - 7082604 TGCCCTTTAAGAGCGAGACTCCACGGCACCCGACAGCAG-TTTCTCAAAGCT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 176569 45 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1357782 275 + 1864846 I e otoGar3.GL873658 955002 81 + 5252280 I e dasNov3.JH576208 1781983 844 + 4416731 I a score=989858.000000 s hg38.chr2_KI270774v1_alt 174514 195 + 223625 CAGG--------Att------ttttttgttttttgttt-----ttttgagacgaagtctcactcttgtcacccaggctggagagcaatggggtgatctcggctcacggcaacctccgtctcccaggttcaagcaattctcctgccccagcctcccgagtagctgggataacaggcacccgccatcacgcccagctaatttttgtatttttagta s panTro5.chr2A 1471300 195 + 111504155 CAGG--------Att------ttttttgttttttgttt-----ttttgagacgaagtctcactcttgtcacccaggctggagagcaatggggtgatctcggctcatggcaacctccgtctcccaggttcaagcaattctcctgccccagcctcccgagtagctgggattacaggcacccaccaccacgcccagataatttttgtatttttagta i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1410497 195 + 114371477 CAGG--------Att------ttttttgttttttgttt-----ttttgagacgaagtctcactcttgtcacccaggctggagagcaatggggtgatctcggctcatggcaacctccgtctcccaggttcaagcaattctcctgccccagcctcccgagtagctgggattacaggcacccaccaccatgcccagctaatttttgtatttttagta i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1434290 194 + 1464242 CAGG--------Att------ttttttgttttttg-tt-----ttttgagacaaagtctcacttttgtcacccaggctggagagcaatggggtgatcttggctcacggcaacctccatctcccaggttcaagcaattctcctgccccagcctcctgagtagctgggattacaggcacccgccaccacgcccagctaatttttgtatttttagta i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1159389 201 + 81552678 CAGG--------Atttttttgttttttgttttttgttt-----ttttgagacgaagtctcactcttgtcacccaggctggagagcaacggggtgatctcagctcactgcaacctccatctcccaggttcaagcaattctcctgccccagcctcctgagtagctgggattacaggcacccgccaccacgcccagctaatttttgtatttttaata i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1487124 208 + 108979918 CAGGGTGTTTTTAtt------tttgtttttgtttgtttatttgttttgagacgaagcctcactcttgttgcccaggccggagagcaatggtgcgatctcggctcaatgcaacctccgcctcccaggttcaagcaattctcctgcctcagcctccctagtagctgggattacagacgactgccgccacacctgactaatttttgtattttgagta i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1459548 208 - 111193037 CAGGGTGTTTTTAtt------tttgtttttgtttgtttatttgttttgagacgaagcctcactcttgttgcccaggccggagagcaatggtgcgatctcggctcaatgcaacctccgcctcccaggttcaagcaattctcctgcctcagcctccctagtagctgggattacagacgactgccgctacacctgactaatttttgcattttcagta i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1487965 208 + 3644372 CAGGGTGTTTTTAtt------tttgtttttgtttgtttatttgttttgagacgaagccacactcttgttgcccaggccggagagcaatggtgcgatctcggctcaatgcaacctccgcctcccaggttcaagcaattctcctgcctcagcctccctagtagctgggattacagacgactgccgccacacctgactaatttttgtattttcagta i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1442204 208 - 10304083 CAGGGTGTTTCCAtt------tttgtttttgtttgtttgtttgttttgagacgaagtctcactcttgttgcccaggctggagagcaatggtgcgatctcggctcactgcaacctccgcctcccaggttcaagcaattctcctgcctcagcctcccgagtagctgggagtaccgacgacggccgccacacctgactaatttttgtattttcagta i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1522242 204 - 107702431 CAGGGTGTTTTTAtt------tttgtttttgtttgtttgtttgttttgagatgaagtctcactcttgttgcccaggctggagagcaatggtgcaacctgggctcaatgcaacctccgcctcccaggttcaagcaattctcctgcctccgcctcccgagtagctgggattacagatgactgccgccac----tactaatttttgtattttcagta i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1014654 208 - 2200435 CAGGGTGTTTCTAtt------tttgtttttgtttgtttgtttgttttgagacgaagtctcactcttgttgcccaggctggagagcaatggtgcgatctcggttcactgcaacctccgcctcccaggttcaagcaattctcctgcctcagcctcccgagtagctgggagtaccgacgacggccgccacacctgactaatttttgtattttcagta i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1444955 204 - 13651311 CAGAGTGtttttatt------tttg----tgtttgtttgtttgttttgagacgaagtctcactcttgttgcccaggctggagagcaatggtgcaatctcagctcaatgcaacctccgcctcccaggttcaggcagttctcctgcctcagcctcctgagtagctgggattacagacgactgccgccacacctgactaatttttgtatttttagta i colAng1.NW_012118821v1 C 0 M 1179 e aotNan1.NW_018513311v1 176569 45 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1264193 0 - 7082604 C e cebCap1.NW_016107827v1 1357782 275 + 1864846 I e otoGar3.GL873658 955002 81 + 5252280 I e dasNov3.JH576208 1781983 844 + 4416731 I e calJac3.chr14 1435269 0 - 108792865 C a score=544271.000000 s hg38.chr2_KI270774v1_alt 174709 115 + 223625 gagatggagtttcaccatgttggccaggctggtcttaaactcctgacctcaggcaatccgcccgcctcggcctccaaaagtgctgggattacaggcatgagccaccgcacctggc s panTro5.chr2A 1471495 115 + 111504155 gagatggagtttcaccatgttggccaggctggtcttaaactcctgacctcaggcaatccgcccgccttggcctccaaaagtgctgggattacaggcgtgagccaccgcacctggc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1410692 115 + 114371477 gagatggagtttcaccatgttggccaggctggtcttaaactcctgacctcaggcaatccgcccgccttggcctccaaaagtgctgggattacaggcgtgagccaccgcacctggc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1434484 115 + 1464242 gagatggagtttcaccatgttggccaggctggtcttaaactcctgacctcaggcaatccgcccgcctcagcctccaaaagtgctgggattacaggcgtgagccaccgcacctggc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1159590 115 + 81552678 cagatggagtttcaccatgctggccaggctggtctcaaactcctgacctcaggcaatccacccgcctcggcctccaaaagtgctgggattacaggcgtgagccaccgcatctggc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1487332 115 + 108979918 cagacagggtttcaccatgttggccaggctggtctcaaactcctgacctcaggcagtccatccgcctcggcctccaaaagtggtggaattacaggcctgagccaccgcacccagc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1459756 115 - 111193037 cagacagggtttcaccatgttggccaggctggtctcaaactcctgacctcaggcagtccatccgcctcggcctccaaaagtggtggaattacaggcctgagccaccgcacccagc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1488173 115 + 3644372 cagacagggtttcaccatgttggccaggctggtctcaaactcctgacctcaggcagtccatccgcctcggcctccaaaagtggtggaattacaggcctgagccaccgcacccagc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1442412 115 - 10304083 cagacaggggttcaccatgttggccaggctggtctcaaactcctgacctcaggcagtccacccgcctcggcctccaaaagtggtgggattacaggcctgagccaccgcacccggc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1522446 115 - 107702431 cagacagggtttcaccatgttggccaggctggtctcaaactcctgacctcaggcagtccacccgcctcggcctccaaaagtggtgggattacaggcctgagccaccgcacccagc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1014862 115 - 2200435 cagacaggggttcaccatgttggccaggctggtctcaaactcctgacctcaggcagtccacccgcctcggcctccaaaagtggtgggattacaggcctgagccaccgcacccggc i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 176569 45 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1264193 0 - 7082604 C e cebCap1.NW_016107827v1 1357782 275 + 1864846 I e otoGar3.GL873658 955002 81 + 5252280 I e dasNov3.JH576208 1781983 844 + 4416731 I e calJac3.chr14 1435269 0 - 108792865 C e colAng1.NW_012118821v1 1445159 1179 - 13651311 M a score=4499.000000 s hg38.chr2_KI270774v1_alt 174824 1 + 223625 --c s panTro5.chr2A 1471610 1 + 111504155 --c i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1410807 1 + 114371477 --c i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1434599 1 + 1464242 --c i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1159705 1 + 81552678 --c i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1487447 1 + 108979918 --c i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1459871 1 - 111193037 --c i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1488288 1 + 3644372 --c i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1442527 1 - 10304083 --c i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1522561 1 - 107702431 --c i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1014977 1 - 2200435 --c i manLeu1.NW_012103754v1 C 0 C 0 s otoGar3.GL873658 955083 3 + 5252280 CTT i otoGar3.GL873658 I 81 C 0 e aotNan1.NW_018513311v1 176569 45 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1264193 0 - 7082604 C e cebCap1.NW_016107827v1 1357782 275 + 1864846 I e dasNov3.JH576208 1781983 844 + 4416731 I e calJac3.chr14 1435269 0 - 108792865 C e colAng1.NW_012118821v1 1445159 1179 - 13651311 M a score=24308.000000 s hg38.chr2_KI270774v1_alt 174825 5 + 223625 TCTAG s panTro5.chr2A 1471611 5 + 111504155 TCTAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1410808 5 + 114371477 TCTAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1434600 5 + 1464242 TCTAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1159706 5 + 81552678 TCTAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1487448 5 + 108979918 TCTAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1459872 5 - 111193037 TCTAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1488289 5 + 3644372 TCTAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1442528 5 - 10304083 TCTAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1522562 5 - 107702431 TCTAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1014978 5 - 2200435 TCTAA i manLeu1.NW_012103754v1 C 0 C 0 s otoGar3.GL873658 955086 3 + 5252280 TCT-- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1782827 5 + 4416731 TCTAA i dasNov3.JH576208 I 844 C 0 e aotNan1.NW_018513311v1 176569 45 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1264193 0 - 7082604 C e cebCap1.NW_016107827v1 1357782 275 + 1864846 I e calJac3.chr14 1435269 0 - 108792865 C e colAng1.NW_012118821v1 1445159 1179 - 13651311 M a score=29886.000000 s hg38.chr2_KI270774v1_alt 174830 5 + 223625 AAGCG s panTro5.chr2A 1471616 5 + 111504155 AAGCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1410813 5 + 114371477 AAGCG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1434605 5 + 1464242 AAGTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1159711 5 + 81552678 AAGCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1487453 5 + 108979918 AAGCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1459877 5 - 111193037 AAGCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1488294 5 + 3644372 AAGCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1442533 5 - 10304083 AAGCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1522567 5 - 107702431 AAGCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1014983 5 - 2200435 AAGCT i manLeu1.NW_012103754v1 C 0 C 0 s aotNan1.NW_018513311v1 176614 5 + 287728 AAGCT i aotNan1.NW_018513311v1 I 45 C 0 s otoGar3.GL873658 955089 5 + 5252280 AAACC i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1782832 5 + 4416731 AAGCT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1264193 0 - 7082604 C e cebCap1.NW_016107827v1 1357782 275 + 1864846 I e calJac3.chr14 1435269 0 - 108792865 C e colAng1.NW_012118821v1 1445159 1179 - 13651311 M a score=627417.000000 s hg38.chr2_KI270774v1_alt 174835 93 + 223625 -CAGATTTTGAATCTCACTCATGCCTTCCTCTTTCACTTTGT---CCATTCTTCC-----AATCCCTCTTCTTCCAAGTTGTTC-------------------CCACCCCTTTGCTCCATG s panTro5.chr2A 1471621 93 + 111504155 -CAGATTTTGAATCTCACTCATGCCTTCTTCTTTCACTTTGT---CCATTCTTCC-----AATCTCTCTGCTTCCAAGTTGTTC-------------------CCACCCCTTTGCTCCATG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1410818 93 + 114371477 -CAGATTTTGAATCTCACTCATGCCTTCTTCTTTCACTTTGT---CCATTCTTCC-----AATCTCTCTGCTTCCAAGTTGTTC-------------------CCACCCCTTTGCTCCATG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1434610 93 + 1464242 -CAGATTTTGAATCTCACTCATGCCTTCCTCTTTCACTTTGT---CCATTCTTCC-----AATCTGTCTTCTTCCAAGTTGTTC-------------------CCACCCCTTTGCTCCATG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1159716 93 + 81552678 -CAGATTTTGAATCTCACTCGTGCCTTCCTCTTTCACTTTGC---CCATTCTTCC-----AATCTGTCTTCTTCCAAGTTGTTC-------------------CCACCCCTTGGCTCCATG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1487458 93 + 108979918 -CAGATTTTGAATGTCGCTCATGCCTTCCTCCTCCAGTTTGT---CCGTTCCTCC-----GATCTGTCTTCCTCCAAGTTGTTC-------------------CCACCCCTTGGCTCCATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1459882 93 - 111193037 -CAGATTTTGAATGTCGCTCATGCCTTCCTCCTCCAGTTTGT---CCGTTCCTCC-----GATCTGTCTTCCTCCAAGTTGTTC-------------------CCACCCCTTGGCTCCATG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1488299 93 + 3644372 -CAGATTTTGAATGTCGCTCATGCCTTCCTCCTCCAGTTTGT---CCGTTCCTCC-----GATCTGTCTTCCTCCAAGTTGTTC-------------------CCACCCCTTGGCTCCATG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1442538 93 - 10304083 -CAGATTTTGAATGTCGCTCATGCCTTCCTTCTCCAGTTTGT---CCGTTCCTCC-----GATCTGTCTTCCTCCAAGTTGTTC-------------------CCACCCCTTGGCTCCATG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1522572 93 - 107702431 -CAGGTTTTGAATCTCGCTCATGCCTTCCTCCTCCAGTTTGT---CTGTTCCTCC-----AATCTGTCTTCTTCCAAGTTGTTC-------------------CCACCCCTTGGCTCCATG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1014988 92 - 2200435 -CAGATTTGGAATGTCGCTCATGCCTTCCTCCTCCAGTTTG----CCGTTCCTCC-----GATCTGTCTTCCTCCAAGTTGTTC-------------------CCACCCCTTGGCCCCAGG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1435269 92 - 108792865 -CAGATTTTAAATCTCACTCCTGCTTTCCTCCTTCGCTTTGT---CTTTTCCTCC-----AATC-GTCTTTTTCCAAGTTTTTC-------------------CCACCCTCTGACTCTGAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1264193 92 - 7082604 -CCGATTTTCAACCTCACTCCTGCGTTCCTCCTTCACTTTGC---CTGTCCCTCC-----AATC-GTCTCTTTCCATGTTTTTC-------------------CCACGCCCTGGCTCCGAG i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 176619 90 + 287728 -CAGATTTTAAATCTCACTCCTGCTTTCCTCCTTCACTTT-----CTGTTCCTCC-----AATC-GTCTTTTTCCAAGCTTTTC-------------------CCACCCCCTGGCTCTGAG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 955094 80 + 5252280 -CCAATTCTAAATCTCACCAAGGCTTCTGTCCTTCAATCTGTCTCCCCTTACCCT-----AATCTGTCATCTGC----------------------------------CCTGGGCTCAGC- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1782837 118 + 4416731 TAGGTTTTTACATCTCACAAATACTTTCCTGCTTCCATTTTT---CTATTCGTTCCTCTAGAATGATCTTCTTCCAAGTTGTTCTCTGTACCTGAAAGGCTTTCCCTCCATTCTCTCAGTG i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1357782 275 + 1864846 I e colAng1.NW_012118821v1 1445159 1179 - 13651311 M a score=1422639.000000 s hg38.chr2_KI270774v1_alt 174928 180 + 223625 ---AGTCTGTTTACCACATGGGCATCCCCTTC---------------------------------------CCAGACCAACTGGAGGATGCCTGGCTATTTCTCCCAGTTCTGTTTGGTCTAAACATGAGACACCAAGAGG----CCCAACCTTCTGTCCCATGAAAGCCTCACTGTCCC-TGGGGG--GAACCAGCCC------AG-TGCTCA--CATGTTGCTGTGCGTGTGCTTG---- s panTro5.chr2A 1471714 180 + 111504155 ---AGTCTGTTTATCACATGGGCATCCCCTTC---------------------------------------CCAGACCAACTGGAGGATGCCTGGCTATTTCTCCCAGTTCTGTTTGGTCTAAACATGAGACACCAAGAGG----CCCAACCTTCTGTCCCATGAAAGCCTCACTGCCCC-TGGGGG--GAACCGGCCC------AG-TGCTCA--CATGTTGCTGTGCATGCACTTG---- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1410911 180 + 114371477 ---AGTCTGTTTATCACATGGGCATCCCCTTC---------------------------------------CCAGACCAACTGGAGGATGCCTGGCTATTTCTCCCAGTTCTGTTTGGTCTAAACATGAGACACCAAGAGG----CCCAACCTTCTGTCCCATGAAAGCCTCACTGCCCC-TGGGGG--GAACCGGCCC------AG-TGCTCA--CATGTTGCTGTGCATGCACTTG---- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1434703 180 + 1464242 ---AGTCTGTTTATCACATGGGCATCCCCTTC---------------------------------------CCAGACCAACTGGAGGGTGCCTGGCTATTTCTCCCAGTTCTGTTTGGTCTAAACATGAAACACCAAGAGG----CCCAACCTTCTGTCCCATGAAAGCCTCACTGCCTC-TGGGGG--GAACCAGCCC------AG-TGCTCA--CATGTTGCTGTGCGTGTGCTTG---- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1159809 180 + 81552678 ---AGTCTGTTTATCACATGGGCATCCCCTTC---------------------------------------CTAGACTAACTGGAGGATGCCCGGCTATTTCTCCCAGTTCTGTTTGGTCTAAACATGAGACACCATGAGG----CCCAACCTTCTGTCCCATGAAAGCCTCACTGCCCC-TGGGGG--GAACCGGCCC------AG-TGCTCA--CATGTTGCTGTGCGTGCACTTG---- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1487551 176 + 108979918 ---AGTCTCTTTGTCACGTGGGCATCCCCTTC---------------------------------------CCAGACTAAC--GAGGATGCCTGGCTATTTCTCCCAGTTCTGTTTGGTCTAAACATGAGACACCAC-AGG----CCCGGCCTTCTGTCCCGCGAAAGCCTCACTGCCCC-T-GGGG--GAACCAGCCC------AG-TGCTCA--CATGTTGCTGTGCGTGCACTTG---- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1459975 176 - 111193037 ---AGTCTCTTTGTCACGTGGGCATCCCCTTC---------------------------------------CCAGACTAAC--GAGGATGCCTGGCTATTTCTCCCAGTTCTGTTTGGTCTAAACATGAGACACCAC-AGG----CCCGGCCTTCTGTCCCGCGAAAGCCTCACTGCCCC-T-GGGG--GAACCAGCCC------AG-TGCTCA--CATGTTGCTGTGCGTGCACTTG---- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1488392 176 + 3644372 ---AGTCTCTTTGTCACGTGGGCATCCCCTTC---------------------------------------CCAGACTAAC--GAGGATGCCTGGCTATTTCTCCCAGTTCTGTTTGGTCTAAACATGAGACACCAC-AGG----CCCGGCCTTCTGTCCCGCGAAAGCCTCACTGCCCC-T-GGGG--GAACCAGCCC------AG-TGCTCA--CATGTTGCTGTGCGTGCACTTG---- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1442631 176 - 10304083 ---AGTCTCTTTGTCACGTGGGCATCCCCTTC---------------------------------------CCAGACTAAC--GAGGATGCCTGGCTATTTCTCCCAGTTCTGTTTGGTCTAAACATGAGACACCAC-AGG----CCCGGCCTTCTGTCCCGTGAAAGCCTCACTGCCCC-T-GGGG--GAACCGGCCC------AG-TGCTCA--CGTGTTGCTGCGCGTGCACTTG---- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1522665 176 - 107702431 ---AGTCTCTTTGTCACGTGGGCATCCCCATC---------------------------------------CCAGACTAAC--GAGGATGCCTGGCTATTTCTCCCAGTTCTGTTTGGTCTAAACATGAGACACCAC-AGG----CCCAGCCTTCTGTCCCGTGAAAGCCTCACTGCCCC-T-GGGG--GAACCGGCCC------AG-TGCTCA--CATGTTGCTGTGTGTGCACTTG---- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1015080 176 - 2200435 ---AGTCTCTTTGTCACGTGGGCGTCCCCTTC---------------------------------------CCAGGCTAAC--GAGGATGCCTGGCTATTTCTCCCAGTTCTGTTTGGTCTAAACATGAGACACCAC-AGG----CCCGGCCTTCTGTCCCGTGAAAGCCTCACTGCCCC-T-GGGG--GAACCGGCCC------AG-TGCTCA--CGTGTTGCTGCGCGTGCACTTG---- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1435361 176 - 108792865 ---AGTCTTT--ATCACATGGGCCTCCCCTCC---------------------------------------CCAGACTCATTGGAGGATGCCTGGCTCTTTCTCCTAGTTCTGTTTCGTCTAAACACAAGACACTATGAGG----CTCGACTTTGTGCCCCCTGAAAGCCTCTTTGCCCC-T--GGG--GAACCGGCCC------AG-TGCTCA--CATGTCGCTATGTGTGAACTTG---- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1264285 178 - 7082604 ---AGTCTCTCCATCACATGGGCCGCTCCTCC---------------------------------------CCAGCCTCACCGGAGGATGCCTGCCTCTTTCTCCTAGTTCTGTTTCGTCTAAACATAAGACACTGTGAGG----CCTGACTTTCTGCCCGCTGAAAGCCTCATGGCCCC-T--GGG--GAACCAGCCC------AG-TGCTCA--CACGTTGCTGTGCGTGCGCCTG---- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1358057 180 + 1864846 ---AGTCTCTTTATCACATGGGCCGCCCCTCC---------------------------------------CCAGATTCACTGGAGGATGCCTGGCTCTTTCTTCTAGTTCTGTTTCGTCTAAACATAAGACACTGTGAGG----CCCGACTTTCTGCCCACTGAAAGCCTCATTGCCCC-T--GGGGAGAACCGGCCC------AG-TGCTCA--CATGTTGCTGTGTGTGCGCTTG---- i cebCap1.NW_016107827v1 I 275 C 0 s aotNan1.NW_018513311v1 176709 178 + 287728 ---AGTCTCTTTACCTCATGGGCCTCCCCTCC---------------------------------------CAAGACTCACTGGAGGATGCCTGGCTGTTTCTCCTAGTTCTGTTTCGTCTAAACATAAGACACTATGAAG----CCCGAC-TTCTGCCCCCTGAAAGCCTCATTGCCCCTT--GGG--GAACCGGCCC------AG-TGCTCA--CACGTCGCTGTGCGTGCGCCTG---- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 955174 178 + 5252280 ---TGTCCCTTTGTGGCCTGGTTCCCCCGTCC---------------------------------------TC------CCTTGGAGATGC---ACTGCCCCTTCCAG-CCTGCTTAGTCTACACAGGAGGCGCCCACAGGG--CCCCCACATCCTGTTTCATGGACTCCTCAATAGCCC-T--GAG--GAGCTGGCCCATCCtgag-tgtctattcatgtgcctgtgtatgtgtgtg---- i otoGar3.GL873658 C 0 I 89 s dasNov3.JH576208 1782955 214 + 4416731 AGCTGCTTCTTCATCACTTACCTATTCCTTGCTCACTTACCTATTCCCTGAATGGAAGTTCCTGATATCCTCCAGACTAACTGGAAAATATGTGAGAATTC----------------ATGTGAACATGAGCTTCCACACGGGTCCCCCAGTTCTCTCTCTTGGGAATGCC-CAGCGTTGC-TGAGGA--GAATCAGTTC------AGTTGGAAA--TGTATTTTTGTGTCTGCATGTGTTTG i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e colAng1.NW_012118821v1 1445159 1179 - 13651311 M a score=484272.000000 s hg38.chr2_KI270774v1_alt 175108 59 + 223625 TCCAGGACTTCT-GCTGGGAGCCTGTGGTGGGCAGGGCGCTGAGAGTAGAACC--AG--ACA--GT s panTro5.chr2A 1471894 59 + 111504155 TCCAGGACTTCT-GCTGGGAGCCTGTGGTGGGCAGGGCGCTGAGAGTAGAACC--AG--ACA--GT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411091 59 + 114371477 TCCAGGACTTCT-GCTGGGAGCCTGTGGTGGGCAGGGCGCTGAGAGTAGAACC--AG--ACA--GT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1434883 59 + 1464242 TCCAGGACTTCT-GCTGGGAGCCTGTGGTGGGCAGGGCGCTGAGAGTAGAACC--AG--ACA--GT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1159989 61 + 81552678 TCCGGGACTTCT-GCTGGGAGCCTGTGGTGGGCAGGGCGCTGAGGGTAGAACCAGAG--ACA--GT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1487727 59 + 108979918 TCCGGGACTTCT-GCTGGGAGCCTGTGGTGGGCAGGGCGCTGAGGATAGAACC--AG--ACA--GT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1460151 59 - 111193037 TCCGGGACTTCT-GCTGGGAGCCTGCGGTGGGCAGGGCGCTGAGGATAGAACC--AG--ACA--GT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1488568 59 + 3644372 TCTGGGACTTCT-GCTGGGAGCCTGCGGTGGGCAGGGCGCTGAGGATAGAACC--AG--ACA--GT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1442807 59 - 10304083 TCCGGGACTTCT-GCTGGGAGCCTGCGGTGGGCAGGGCGCTGACAATAGAACC--AG--ACA--GT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1522841 59 - 107702431 TCCGGGACTTCT-GCTGGGAGCCTGCGGTGGGCAGGGTGCTGAGGATAGAACC--AG--ACA--GT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1015256 59 - 2200435 TCCGGGACTTCT-GCTGGGAGCCTGCGGTGGGCAGGGCGCTGACGATAGAACC--AG--ACA--GT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1435537 61 - 108792865 TCTGGGACTTCC-ACCGGGAGCCTGTGGTGGGCAGGGTGCTGAGGGTGGAAGC--AG--ACACAGT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1264463 60 - 7082604 TCCGGGACTTCC--CCGGGAGCCTGTGGTGGGCAGGGTGCTAAGCGTGGAAGC--AG--ACACAGT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1358237 62 + 1864846 TCCGGAACTTCCCCCCGGGAGCCTGTGGTGGGCAGGGTGCTGAGGGTGGAAGC--AG--GCACAGT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 176887 57 + 287728 TCCGGGACTTCC-ACCGGGAGCCTGTGGTGGGCCGGGTGCTGAGGGTGGAAGC--AG--ACA---- i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1783169 61 + 4416731 Cacaatactttt-gttgagtgcccactgtacgtaagacatggggaataaaaca--aggaaca--at i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e otoGar3.GL873658 955352 89 + 5252280 I e colAng1.NW_012118821v1 1445159 1179 - 13651311 M a score=1779888.000000 s hg38.chr2_KI270774v1_alt 175167 224 + 223625 CTTAGCTAAAGCACCACACAGGGCGGGTG-GATGAGTAGAGACAG--TAGCAGAGGC-------------------------CC-TGGGC-GGCGCTCTGATCAGAACCCGTGGG--------------AGTG--------------------------AGGGTCGCCCATCCT-------TGAGGAGGGAGCACTTC-TGGAGGAGGTGACA--------GCTGAACCAAGAGGA-------GTGGATGAGGGA-CGAAGGCAGATGTGAGGAGTGGgg------cacagggaggggcacga----------------gtgtcaggcaaaggc-gcagcc s panTro5.chr2A 1471953 224 + 111504155 CTTAGCTAAAGCACCACACAGGGCGGGTG-GATGAGTAGAGACAG--TAGCAGAGGC-------------------------CT-TGGGC-GGTGCTCTGATCAGAACCCATGGG--------------AGTG--------------------------AGGGTCGCCCATCCT-------TGAGGAGGGAGCACTTC-TGGAGGAGGTGACA--------GCTGAACCAAGAGGA-------GTGGATGAGGGA-CGAAGGCAGATGTGAGAAGGGGgg------cacagggaggggcacga----------------gtgtcaggcaaaggc-gcagcc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411150 224 + 114371477 CTTAGCTAAAGCACCACACAGGGCGGGTG-GATGAGTAGAGACAG--TAGCAGAGGC-------------------------CT-TGGGC-GGTGCTCTGATCAGAACCCATGGG--------------AGTG--------------------------AGGGTCGCCCATCCT-------TGAGGAGGGAGCACTTC-TGGAGGAGGTGACA--------GCTGAACCAAGAGGA-------GTGGATGAGGGA-CGAAGGCAGATGTGAGAAGGGGgg------cacagggaggggcacga----------------gtgtcaggcaaaggc-gcagcc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1434942 224 + 1464242 CTTAGCTAAAGCACCACACAGGGCGGGTG-GATGAGTAGAGACAG--TAGCAGAGGC-------------------------CC-TGGGC-GGCGCTCTGATCAAAACCCGTGGG--------------AGTG--------------------------AGGGTCGCCCATCCT-------TGAGGAGGGAGCACTTC-TGGAGGAGGTGACA--------GCTGAACCAAGAGGA-------GTGGATGAGGGA-CGAAGGCAGATGTGAGGAGGGGgg------cacagggaggggcacga----------------gtgtcaggcaaaggc-gcagcc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160050 224 + 81552678 CTTAGCTAAAGCACTGCACAGGGCAGGTG-GGTGAGTAGAGACAG--TAGCAGAGGC-------------------------CC-TGGGC-GGCGCTCTGATCAGACCCCGCGGG--------------AGTG--------------------------AGGGTCGCCCATCCT-------TGAGGAGGGAGCACTTC-TGGAGGAGGCGACA--------GCTGAACCAAGAAGA-------GTGGATGAGGGA-CGAAGGCGGATGTGAGGAGCGagg------cacagggaggggcacga----------------gtgtcaggcaaaggc-gcagcc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1487786 224 + 108979918 CTTAGCTAAAGCACCACACAGGGCGGGTG-GATGAGCAGAGACAG--CAGCAGAGGC-------------------------CC-TGGAC-TGCGCTCTGATCAGACCCCACGGG--------------AGTG--------------------------AGGGTCGCCCAGCCT-------TGAGGAGGGAGTGCTTC-TGGAGGAGGCGACA--------GTGGAACCAAGAGGA-------GTGGATGAGGGA-CGAAGGCGGATGTAAGGAGCAGgg------cacagggaggggcacca----------------gtgtcaggcaaaggt-acagcc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1460210 223 - 111193037 CTTAGCTAAAGCACCACACAGGGCGGGTG-GATGAGCAGAGACAG--CAGCAGAGGC-------------------------CC-TGGAC-TGCGCTCTGATCAGACCCCACGGG--------------AGTG--------------------------AGGGTCGCCCAGCC--------TGAGGAGGGAGCGCTTC-TGGAGGAGGCGACA--------GTGGAACCAAGAGGA-------GTGGATGAGGGA-CGAAGGCGGATGTAAGGAGCAGGG------CACGGGGAGGGGCACCA----------------GTGTCAGGCAAAGGT-ACAGCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1488627 224 + 3644372 CTTAGCTAAAGCACCACACAGGGCGGGTG-GATGAGCAGAGACAG--CAGCAGAGGC-------------------------CC-TGGAC-TGCGCTCTGATCAGACCCCACGGG--------------AGTG--------------------------AGGGTCGCCCAGCCT-------TGAGGAGGGAGTGCTTC-TGGAGGAGGCGACA--------GTGGAACCAAGAGGA-------GTGGATGAGGGA-CGAAGGCGGATGTAAGGAGCAGgg------cacagggaggggcacca----------------gtgtcaggcaaaggt-acagcc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1442866 224 - 10304083 CTTAGCTGAAGCACCACACAGGGCGGGTG-GATGAGCAGAGACAG--CAGCAGAGAC-------------------------CC-TGGAC-TGCGCTCTGATCAGACCCCGCGGG--------------AGTG--------------------------AGGGTCGCCCAGCCT-------TGAGGAGGGAGTGCTTC-TGGAGGAGGCGACG--------GTGGAACCAAGAGGA-------GTGAATGAGGGA-TGAAGGCGGATATAAGGAGCGGGG------CACAGGGAGGGGTACCA----------------GTGTCAGGCAAAGGT-GCAGCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1522900 224 - 107702431 CTTAGCTAAAGCACCACACAGGGTGGGTG-GATGAGCAGAGACAG--CAGCAGAGAC-------------------------CC-TGGAC-TGCTCTCTGATCAGACCCCGCGGG--------------AGTG--------------------------AGGGTCGCCCAGCCT-------CGAGGAGGGAGTGCTTC-CGGAGGAGGCGACA--------GTGGAACCAAGAGGA-------GTGGATGAGGGA-CGATGGTGGATGTAAGGAGCAGGG------CACAGGGAGGGGCACCA----------------GTGTCAGGCAAAGGT-GCAGCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1015315 224 - 2200435 CTTAGCTGAAGCACCACACAGGGCGGGTG-GATGAGCAGAGACAG--CAGCAGAGGC-------------------------CC-TGGAC-TGCGCTCTGATCAGACCCCGCGGG--------------AGTG--------------------------AGGGTCGCCCAGCCT-------TGAGGAGGGAGTGCTTC-TGGAGGAGGCGACG--------GTGGAACCAAGAGGA-------GTGGATGAGGGA-CGAAGGCGGATGTGAGGAGCGGGG------CACAGGGAGGGGCACCA----------------GTGTCAGGCAAAGGT-GCAGCC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1435598 241 - 108792865 CACAGCCAAAGCTCTGCACGGGGCAGGTG-GATGAGCAAAGACAG--CAGCAGAGGC-------------------------CC-TGGGC-GACACTCTGATCAGATGCCACGGGC-------------TGTG--------------------------AGGGTCACCCAGCCT-------GCAGGAGGGAGGGCTTC-TGGAGGAGGCAACA--------GCTGAACCAAGAGGA-------GTGGATGAGGGT-CAAAGGCGGATGTGAGGAGGGGGG------CACAGCGAGGGGCACAAAAGGGGGAGCAAGTGCGTATCAGGCAAAGGT-GCAGCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1264523 227 - 7082604 CTCAGCTAAAGCTCTGCCCGGGGCAGGCG-GTTTAGCAAAGACAG--CAGCGGAGGT-------------------------CC-TGGGC-GGCACTGTGATCAGACGCCATGGGC-------------CATG--------------------------AGGGTCGCCCAGCCT-------GCAGGAGGGAGGGCTTC-TGGGGGAGGCAACC--------GCTGAACCAAGAGGA-------GTGGATGAGGGT-CGAAGGCGGATGTGAGGC-AGGGA------CACAGCGA-------------GGGAGCGAGTGTGTGTCAGGCAAAGGT-GCAGCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1358299 235 + 1864846 CTCAGCTAAAGCTCTGCCCGGGGGGGGCG-GATGAGCAAGGACAG--CAGCACAGGC-------------------------CC-TGGGC-GGCACTCTGATCAGAAGCCGC--TC-------------CGTG--------------------------AGGGTCGCCCAGCCT-------GCAGGAGGGAGGGCTTC-TGGAGGAGGCAACC--------GCTGAACCAAGAGGA-------GTGGATGAGGGT-CGAAGGCGGATGTGAGGAGGGGGG------CACAGCAAGGGGCACAG----GGGAGCGAGTGTGTGTCAGGCAAAGGT-GCAGCC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 176944 217 + 287728 ------------------CGGGGCGGGTG-GATGAGCGAAGACAG--CAGCAGAGGC-------------------------CC-TGGGC-GGCGCTCGCATCAGACGCCGCGGG---------------------------------------------GGGTCGCCCAGCCT-------GCAGGAGGGAGGGCGTC-TGGAGGAGGCAGCA--------GCCGAACCAAGAGGA-------GTGGATGAGGGT-CGAAGGCGGCCGTGAGGAGGGGGG------CACAGCGAGGGGCACGAAAGGGGGAGCGAGTGTGTATCAGGCAAAGGT-GCAGCC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 955441 278 + 5252280 CTACATTTGAGCAGGGCCCAAGGTGTGCA-G-TGAGAACAGACAG----GCAGAGACAGGTATCAGAGAAAACAATACCAAGCC-TGGGCAAGCACTCTGAGCAGACACAGGCAGCTGTCATTGCAGAAAGTC--------------------------AGGGTCATGCAGCCT-------GGACGAGGCAGAGCCAAGCAGAGAGGGCAGCACAGAGAGGGCGGAGCCAAGAAGAGAGGGCTGTGGGTGACAGA-TGAAAGGAGGAGTGTGTCAGGTGG------GGCGGCGTGGAGGACAA--------------GTGTGTCAGGC-AAGGA-GCAGCC i otoGar3.GL873658 I 89 C 0 s dasNov3.JH576208 1783230 284 + 4416731 cccagtaaaaggattccagatggcgtaagtgataagcaaagaaaaaacaataaagct-------------------------ccatgatg-agtgttctggttagattcagtacgt-------------agtgctattcagtacggggtacaatttagaaagttcacctcacttaatttgccgaggagaaag-gtttc-tgtaggaggctatc--------actaaactgagaccag------gaggataacagagctaaggtcaagatgggggggagggcaggaccatggagaagggagtgagaagaggaaaaatt--gtattaggcaaaggcagcagct i dasNov3.JH576208 C 0 I 197 e mm10.chr12 90030866 3028 - 120129022 I e colAng1.NW_012118821v1 1445159 1179 - 13651311 M a score=523215.000000 s hg38.chr2_KI270774v1_alt 175391 87 + 223625 acagAGTCAGACCATGGACGGGGGCCTGGGCAGGGAGCAGCTGAGGCGTGGGTCAGTGAGCAGGAGGAGGAGTGAGAAGAGAGGCCA s panTro5.chr2A 1472177 87 + 111504155 acagAGTCAGACCATGGATGGGGGCCTGGGCAGGGAGCAGCTGAGGCGTGGGTCAGCGAGCAGGAGGAGGAGTGAGAAGAGAGGCCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411374 87 + 114371477 acagAGTCAGACCACGGATGGGGGCCTGGGCAGGGAGCAGCTGAGGCGTGGGTCAGCGAGCAGGAGGAGGAGTGAGAAGAGAGGCCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435166 87 + 1464242 acagAGTCAGACCATGGATGGGGGCCTGGGCAGGGAGCAGCTCAGGCGTGGGTCAGTGAGCAGGAGGAGGAGTGAGAAGAGAGGCCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160274 84 + 81552678 acagAGTCAGACCATGGATAGGGGCCTGGGAAGGGAGCAGCTCAGGCTTGGTTCAGCAAGC---AGGAGGAGTGAGAAGAGAGGCTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1488010 87 + 108979918 acagAGTCAGACCATGAATGAGGGCCTGGGCAGTGAGCAGCTCAGGCGTGGGGCAGCGAGCAGAAGGAGGAGTGAGAAGAGAGGCCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1460433 87 - 111193037 ACAGAGTCAGACCATGAATGAGGGCCTGGGCagtgagcagctcaggtgtggggcagcgagcagaaggaggagtgagaagagaggCCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1488851 64 + 3644372 acagAGTCAGACCATGAATGAGGGCCT-----------------------GGGCAGCGAGCAGAAGGAGGAGTGAGAAGAGAGGCCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1443090 64 - 10304083 ACAGAGTCAGACCATGGATGAGGGCCT-----------------------GGGCAGCGAGCAGGAGGAGGAGTGAGAAGAGAGGCCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1523124 87 - 107702431 ACAGAGTCAGACCATGAATGAGGGCCtgggcagtgagcagctcaggcgtggggcagtgagcaggaggaggagtgagaagagagGCCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1015539 64 - 2200435 ACAGAGTCAGACCATGGATGAGGGCCT-----------------------GGGCAGCGAGCAGGAGGAGGAGTGAGAAGAGAGGCCA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1435839 82 - 108792865 ACGGAGCCAGACCACAGAT--GGGGCTGGGCAGGGAGCGACCCAGGTGTGGGTCAGCAAG---GCGGAGGAGTGATGAGAGAGGCCG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1264750 83 - 7082604 ACAGAGCCAGACCGCGGATG-GGGGCTGGGCAGGGAGTGACTCAGGTGTGGGTCAGCAAG---GAGGAGGCGTCATGAGAGAGGCCT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1358534 82 + 1864846 ACAGAGCCAGACCACGGAT--GGGGCTGGGCAGGGAGCGACTCAGGTGTGGGTCAGCAAG---GAGGAGGTGTGATGAGAGAGGCCG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 177161 83 + 287728 ACAGACCTGGACCGCGGATG-GGGCCTGGGCAGGGAGCGACTCAGGTGTGGGTCAGCAAG---GAGGAGGCGTGATGAGAGAGGCCG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 955719 70 + 5252280 TGCAGGCCCAACCACAAGACAGGG-CTGGGGAGGGAGAGCCCCA---------TAGTGGG---GCTGAGGCTGCAGAAGAGCA---- i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e dasNov3.JH576208 1783514 197 + 4416731 I e colAng1.NW_012118821v1 1445159 1179 - 13651311 M a score=434187.000000 s hg38.chr2_KI270774v1_alt 175478 46 + 223625 GGGATTCACCAGGGCTCCCAGGAAGAAAAGATCTCCAGTCTTCAAT s panTro5.chr2A 1472264 46 + 111504155 GGGATTCACCAGGGCTCCCAGGAAGAAAAGATCTCCAGTCTTCAAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411461 46 + 114371477 GGGATTCACCAGGGCTCCCAGGAAGAAAAGATCTCCAGTCTTCAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435253 46 + 1464242 GGGATTCACCAGGGCTCCCAGGAAGAAAAGATCTCCAGTCTTCAAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160358 46 + 81552678 GGGATTCACCAGGGTTCTCAGCAAGAAAAGATCTCCAGTCTTCAAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1488097 46 + 108979918 GGGATTCACCAGGGTTCCCAGCAAGAAAAGATCTCTAGTCTTCAAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1460520 46 - 111193037 GGGATTCACCAGGGTTCCCAGCAAGAAAAGATCTCTAGTCTTCAAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1488915 46 + 3644372 GGGATTCACCAGGGTTCCCAGCAAGAAAAGATCTCTAGTCTTCAAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1443154 46 - 10304083 GGGATTCACCAGGGTTCCCAGCAAGAAGAGATCTCCAGTCTTCAAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1523211 46 - 107702431 GGGATTCACCAGGGTTCCCAGCAAGAAGAGATCTCCAGTCTTCAAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1015603 46 - 2200435 GGGATTCACCAGGGTTCCCAGCAAGAAGAGATCTCCAGTCTTCAAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1446344 46 - 13651311 GGGATTCACCAGGGTTCCCAGCAAGAAGAGATCTCCAGTCTTCAAT i colAng1.NW_012118821v1 M 1179 C 0 s calJac3.chr14 1435921 45 - 108792865 GGGACTCA-CCAGGGTTGCAACAAGAAAAGATCTCCAGTCTTCAAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1264833 45 - 7082604 GGGACTCA-CAGGGTTCCCAGCAAGAAAAGATCTCCAGTCTTCAAT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1358616 45 + 1864846 GGGACTCA-CAGGGCTCCCAGCAAGAAAAGATCTCCAGTCTTCAAT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 177244 46 + 287728 GGGACTCACCAGGGTTCCCAGCAAGAAAAGATCGCCAGTCTTCAAT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 955789 12 + 5252280 -----------GGGC-----------------------TCTGCCAG i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e dasNov3.JH576208 1783514 197 + 4416731 I a score=235240.000000 s hg38.chr2_KI270774v1_alt 175524 26 + 223625 ATGGAGATGAGTGGCCAGACAGATAA s panTro5.chr2A 1472310 26 + 111504155 ATGGAGATGAGTGGCCAGACAGATAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411507 22 + 114371477 ATGGAGATGAGTGGC----CAGATAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435299 26 + 1464242 ATGGAGATGAGTGGCCAGACAGATAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160404 22 + 81552678 ATGGAGATGAGTGGC----CAGACAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1488143 26 + 108979918 ATGGAGATGACTAGCCAGACAGATAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1460566 26 - 111193037 ATGGAGATGATTAGCCAGACAGATAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1488961 26 + 3644372 ATGGAGATGACTAGCCAGACAGATAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1443200 26 - 10304083 ATGGAGATGACTGGCCAGACAGATAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1523257 26 - 107702431 ATGGAGATGACTGGCCAGACAGATAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1015649 26 - 2200435 ATGGAGATGACTGGCCAGACAGATAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1446390 26 - 13651311 ATGGAGATGACTGACCAGACAGAAAA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1435966 26 - 108792865 ATGGAGATGGTTGGCCAGACAGATAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1264878 26 - 7082604 ATGGAGATGGTTGGCCCGACAGATAA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1358661 26 + 1864846 ATGGAGATGGTTGGCCAGACAGATAA i cebCap1.NW_016107827v1 C 0 I 46 s aotNan1.NW_018513311v1 177290 26 + 287728 ATGGGGACGGCTGGCCAGACAGATAA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 955801 16 + 5252280 ACAGAGGTGA-TGGC---AC------ i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1783711 26 + 4416731 AAAGAGATAATTGGTCAGGACAGTAA i dasNov3.JH576208 I 197 C 0 e mm10.chr12 90030866 3028 - 120129022 I a score=56233.000000 s hg38.chr2_KI270774v1_alt 175550 16 + 223625 AGATA--------------TTtgt--------g------tgtgt s panTro5.chr2A 1472336 24 + 111504155 AGATA--------------TTtgtgtgtgtggg------tgtgt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411529 24 + 114371477 AGATA--------------TTtgtgtgtgtggg------tgtgt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435325 24 + 1464242 AGATA--------------TTtgtgtgtgtggg------tgtga i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160426 30 + 81552678 AGATA--------------TTtgtgtgtgtgtgtgtgcatgtgt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1488169 16 + 108979918 AGATA--------------TTtgtgtgtgt-------------- i rheMac8.chr13 C 0 I 10 s macFas5.chr13 1460592 16 - 111193037 AGATA--------------TTTGTGTGTGT-------------- i macFas5.chr13 C 0 I 10 s macNem1.NW_012011978v1 1488987 16 + 3644372 AGATA--------------TTtgtgtgtgt-------------- i macNem1.NW_012011978v1 C 0 I 10 s cerAty1.NW_012000820v1 1443226 16 - 10304083 AGATA--------------TTtgtgtgtgt-------------- i cerAty1.NW_012000820v1 C 0 I 10 s chlSab2.chr14 1523283 29 - 107702431 AGATATTTGTGTGTGTCCCTTtgtgtgtg--------------- i chlSab2.chr14 C 0 I 7 s manLeu1.NW_012103754v1 1015675 15 - 2200435 AGATA--------------TTtgtgtgtg--------------- i manLeu1.NW_012103754v1 C 0 I 7 s colAng1.NW_012118821v1 1446416 16 - 13651311 AGACA--------------TTtgtgtgtgt-------------- i colAng1.NW_012118821v1 C 0 I 61 s calJac3.chr14 1435992 15 - 108792865 AGATA--------------TTTGTGTATG--------------- i calJac3.chr14 C 0 I 2 s saiBol1.JH378218 1264904 16 - 7082604 AGATA--------------TTTGTGTATGT-------------- i saiBol1.JH378218 C 0 I 2 s aotNan1.NW_018513311v1 177316 16 + 287728 AGATA--------------TTTGTGTATGT-------------- i aotNan1.NW_018513311v1 C 0 I 2 s otoGar3.GL873658 955817 16 + 5252280 AGACA--------------CTCTCCTGTGT-------------- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1783737 30 + 4416731 GGATATTCATTTATAACCCTTTCCATATAT-------------- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1358687 46 + 1864846 I a score=-6991.000000 s hg38.chr2_KI270774v1_alt 175566 4 + 223625 --gtgt s panTro5.chr2A 1472360 4 + 111504155 --gtgt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411553 4 + 114371477 --gtgt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435349 4 + 1464242 --gtgt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160456 4 + 81552678 --gtgt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1488195 4 + 108979918 --gtgt i rheMac8.chr13 I 10 C 0 s macFas5.chr13 1460618 4 - 111193037 --gtgt i macFas5.chr13 I 10 C 0 s macNem1.NW_012011978v1 1489013 4 + 3644372 --gtgt i macNem1.NW_012011978v1 I 10 C 0 s cerAty1.NW_012000820v1 1443252 4 - 10304083 --gtgt i cerAty1.NW_012000820v1 I 10 C 0 s chlSab2.chr14 1523319 4 - 107702431 --gtgt i chlSab2.chr14 I 7 C 0 s manLeu1.NW_012103754v1 1015697 4 - 2200435 --gtgt i manLeu1.NW_012103754v1 I 7 C 0 s calJac3.chr14 1436009 2 - 108792865 --CT-- i calJac3.chr14 I 2 I 6 s saiBol1.JH378218 1264922 2 - 7082604 --CT-- i saiBol1.JH378218 I 2 I 6 s aotNan1.NW_018513311v1 177334 2 + 287728 --CT-- i aotNan1.NW_018513311v1 I 2 I 26 s otoGar3.GL873658 955833 2 + 5252280 ----GT i otoGar3.GL873658 C 0 I 2 s dasNov3.JH576208 1783767 4 + 4416731 ACTT-- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1358687 46 + 1864846 I e colAng1.NW_012118821v1 1446432 61 - 13651311 I a score=-45779.000000 s hg38.chr2_KI270774v1_alt 175570 12 + 223625 gtgagtgggtg---------------------------------------g s panTro5.chr2A 1472364 12 + 111504155 gtgagtgtgtT---------------------------------------G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411557 12 + 114371477 gtgagtgtgtT---------------------------------------G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435353 12 + 1464242 gtgtgtgtgtg---------------------------------------g i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160460 13 + 81552678 gtgagtgtgtgt--------------------------------------g i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1488199 41 + 108979918 gtgtgtgtgtgtgCGCGCGCGCAT----------gagagagagaggagaga i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1460622 39 - 111193037 gtgtgtgtgtgtgtgtgCGCGCAT------------gagagagaggggaga i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1489017 37 + 3644372 gtgtgtgtgtgtgCATGCATga--------------gagaggggagagaga i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1443256 28 - 10304083 gtgtgtgtgtgtgcgcgtgtga-----------------------gagaga i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1523323 51 - 107702431 gtgtgtgtgtgCGCGCGCGCGCACGCGCGTgagagagagaggggggagcga i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1015701 41 - 2200435 gtgtgtgtgtgCGCGCGCGCGCAT----------gacagagaggggagaga i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1436017 11 - 108792865 ----------------------------------------GGGAGGGATGG i calJac3.chr14 I 6 I 8 s saiBol1.JH378218 1264930 11 - 7082604 ----------------------------------------GGGAGGGATGG i saiBol1.JH378218 I 6 I 6 s otoGar3.GL873658 955837 12 + 5252280 ------CTGTCCTCCCCG--------------------------------- i otoGar3.GL873658 I 2 C 0 s dasNov3.JH576208 1783771 12 + 4416731 ------------------------------------GTGAGGGAGGGG--- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 177336 26 + 287728 I e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1358687 46 + 1864846 I e colAng1.NW_012118821v1 1446432 61 - 13651311 I a score=16637.000000 s hg38.chr2_KI270774v1_alt 175582 8 + 223625 gg-------------gggggg s panTro5.chr2A 1472376 17 + 111504155 GGGGGG----GCGGAGGGGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411569 17 + 114371477 GGGGGG----GCGGAGGGGGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435365 21 + 1464242 ggggggtggtgtggggggggc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160473 17 + 81552678 GGGGGG----GTAGGGGGCAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1488240 17 + 108979918 ggggga----ggagagagagc i rheMac8.chr13 C 0 I 8 s macFas5.chr13 1460661 17 - 111193037 ggggga----agagagagagc i macFas5.chr13 C 0 I 8 s macNem1.NW_012011978v1 1489054 17 + 3644372 ggggga----agagagagagc i macNem1.NW_012011978v1 C 0 I 8 s cerAty1.NW_012000820v1 1443284 17 - 10304083 ggggga----agagagagagc i cerAty1.NW_012000820v1 C 0 I 8 s chlSab2.chr14 1523374 17 - 107702431 ggggaa----agagagagagc i chlSab2.chr14 C 0 I 8 s manLeu1.NW_012103754v1 1015742 17 - 2200435 ggggga----agagagagagc i manLeu1.NW_012103754v1 C 0 I 8 s calJac3.chr14 1436036 8 - 108792865 -------------GGGAGGGC i calJac3.chr14 I 8 C 0 s saiBol1.JH378218 1264947 8 - 7082604 -------------GGGAGGGC i saiBol1.JH378218 I 6 C 0 s aotNan1.NW_018513311v1 177362 8 + 287728 -------------gggagggC i aotNan1.NW_018513311v1 I 26 C 0 s otoGar3.GL873658 955849 8 + 5252280 ------------GGGTGGGG- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1783783 8 + 4416731 ------------AAAGAGGG- i dasNov3.JH576208 C 0 I 14 e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1358687 46 + 1864846 I e colAng1.NW_012118821v1 1446432 61 - 13651311 I a score=9661.000000 s hg38.chr2_KI270774v1_alt 175590 1 + 223625 g s panTro5.chr2A 1472393 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411586 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435386 1 + 1464242 g i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160490 1 + 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1488265 1 + 108979918 g i rheMac8.chr13 I 8 C 0 s macFas5.chr13 1460686 1 - 111193037 g i macFas5.chr13 I 8 C 0 s macNem1.NW_012011978v1 1489079 1 + 3644372 g i macNem1.NW_012011978v1 I 8 C 0 s cerAty1.NW_012000820v1 1443309 1 - 10304083 g i cerAty1.NW_012000820v1 I 8 C 0 s chlSab2.chr14 1523399 1 - 107702431 g i chlSab2.chr14 I 8 C 0 s manLeu1.NW_012103754v1 1015767 1 - 2200435 g i manLeu1.NW_012103754v1 I 8 C 0 s colAng1.NW_012118821v1 1446493 1 - 13651311 G i colAng1.NW_012118821v1 I 61 C 0 s calJac3.chr14 1436044 1 - 108792865 A i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1264955 1 - 7082604 G i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 177370 1 + 287728 A i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 955857 1 + 5252280 G i otoGar3.GL873658 C 0 I 8 s dasNov3.JH576208 1783805 1 + 4416731 G i dasNov3.JH576208 I 14 C 0 e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1358687 46 + 1864846 I a score=776573.000000 s hg38.chr2_KI270774v1_alt 175591 80 + 223625 tgctggc-ttctgtgtgtgCTCCTGATGTCATTGTGGGAGGCAAACTCTGAAGAGGATGCAGAG-CTGTGTCAGTTGCCCTG s panTro5.chr2A 1472394 80 + 111504155 TTCTGGC-TTCTGTGTGTGCTCCTGATGTCATTGTGGGAAGCAAACTCTGAAGAGGATGCAGAG-CTGTCTCGGTTGCCCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411587 80 + 114371477 TTCTGGC-TTCTGTGTGTGCTCCTGATGTCATTGTGGGAAGCAAACTCTGAAGAGGATGCAGAG-CTGTCTCGGTTGCCCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435387 80 + 1464242 tgctggc-ttctgtgtgtgCTCCTGATGTCATTGTGGGAGGCAAACTCTGAAGAGGATGCAGAG-CTGTCTCGGTTGCCCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160491 80 + 81552678 TGCTGGC-TTTTGTGTGTGCTCCTGATGTCATTGTGGGAGGCAAATCCTGAAGAGAATGCGGAG-CTGTTTCGGTTGCCCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1488266 80 + 108979918 TGCTGGC-TTCTGTGTGTGCTCCTGATGTCATTGTGGGAGGTAAACTCTGAAGAGGATGCAGAG-CTGTCTCGGTTGCTCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1460687 80 - 111193037 TGCTGGC-TTCTGTGTGTGCTCCTGATGTCATTGTGGGAGGTAAACTCTGAAGAGGATGCAGAG-CTGTCTCGGTTGCTCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1489080 80 + 3644372 TGCTGGC-TTCTGTGTGTGCTCCTGATGTCATTGTGGGAGGTAAACTCTGAAGAGGATGCAGAG-CTGTCTCGGTTGCTCTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1443310 80 - 10304083 TGCTGGC-TTCTGTGTGTGCTCCTGATGTCATTGTGGGAGGTAAACTCTGAAGAGGATGCAGAG-CTGTCTCGGTTGCTCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1523400 80 - 107702431 CGCTGGC-TTCTGTGTGTGCTCCTGATGTCATTGTGGGAGGTAAACTCTGAAGAGGATGCAGAG-CTGTCTCGGTTGCTCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1015768 80 - 2200435 TGCTGGC-TTCTGTGTGTGCTCCTGATGTCATTGTGGGAGGTAAACTCTGAAGAGGATGCAGAG-CTGTCTCCGTTGCTCTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1446494 80 - 13651311 TGCTGGC-TTCAGTGTGTGCTCCTGATGTCATTGTGGGGGGTAAACTCTGAAGAGAATGCAGAG-CTGTCTCGGTTGCTCTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1436045 62 - 108792865 TGCTAGC-TTCTATGTGTGCCCCTGATGTCACTGTGGGA-GTGAACTCTGAGGAGGA------------------TGCTCTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1264956 79 - 7082604 TGCTAGC-TTCTGGGTGTGGCCCTGATGTCGCTGTGGGA-GTGAACTCTGAGGAGGGTGAGGAG-CTGTCTCAGCTGCTCTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1358733 79 + 1864846 TGCTAGC-TTCTATGTGTGTCCCTAATGTCGCTGTGGGA-GTAAACTCTGAGGAGGATGCGGAG-CTGTCTCGGCTGCTCTG i cebCap1.NW_016107827v1 I 46 C 0 s aotNan1.NW_018513311v1 177371 79 + 287728 TGCTAGC-TTCTGTGTGTGCCCCTGATGTCACTGTGGGA-GTAAACTCGGAGGAGGACGCGGAG-CTGTCTCAGCTGCTCTG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 955866 68 + 5252280 GGCTGGC-TC-----TGTGGCCCTGCTGTCCCCATGAAGCAGAGACTCTGA-------GCAAGG-ACAGCCTAGCTGCTCTG i otoGar3.GL873658 I 8 I 136 s dasNov3.JH576208 1783806 82 + 4416731 TGCCGGTATTTTCTCTGCCATCTCAATGTCATTATGGAATGTCAACCTCATAAAAGGTAAGGATCCCATGTCAGTTGCTCTG i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I a score=1151511.000000 s hg38.chr2_KI270774v1_alt 175671 116 + 223625 TAGAGGCAAGAACTAAGTGCAGGCTGGGCAATAACAGGAATGCACTTAGATGTCACGGACT--CAGCATTCTTGCTGTCTCC-AGCTCCTTTATGAACAAA-CCTGCAAAAAGAGCTCTG s panTro5.chr2A 1472474 116 + 111504155 TAGAGGCGAGAACTAAGTGCAGGCTGGGCGATAACAGGAATGCAGTTAGATGTCATGGACT--CAGCATTCTTGCTGTCTCC-AGCTCCTTTATGAACAAA-CCTGCAAAAAGAGCTCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411667 116 + 114371477 TAGAGGCGAGAACTAAGTGCAGGCTGGGCGATAACAGGAATGCAGTTAGATGTCATGGACT--CAGCATTCTTGCTGTCTCC-AGCTCCTTTATGAACAAA-CCTGCAAAAAGAGCTCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435467 116 + 1464242 TAGAGGTGAGAACTAAGTGCAGGCTGGGCGATAACAGGAATGCACTTAGATGTCATGGACT--CAGCATTCTTGCTGTCTCC-AGCTCCTTTATGAACAAA-CCTGCAAAAAGAGCTCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160571 117 + 81552678 TAGAGGCGAGAACTAAGCGCAGGCTGGGCGATAACAGGAATGCACTTAGATGTCGTTGACT--GGGCATTCTTGCTGTCTCC-AGCTCCTTTATGAACAAACCCTGCAAAAAGAGCTCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1488346 117 + 108979918 GAGAGGTGAGAACTAAGTGCAGGCTGGGCGATAACAGGAATGCACTTAAATGTCGTGGACT--CAGCATTCTTGCTGTCTCC-AGCTCCTTTATGAACAAACCCTGCAGAAAGAGCTCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1460767 117 - 111193037 GAGAGGTGAGAACTAAGTGCAGGCTGGGCGATAACAGGAATGCACTTAAATGTCGTGGACT--CAGCATTCTTGCTGTCTCC-AGCTCCTTTATGAACAAACCCTGCAGAAAGAGCTCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1489160 117 + 3644372 GAGAGGTGAGAACTAAGTGCAGGCTGGGCGATAACAGGAATGCACTTAAATGTCGTGGACT--CAGCATTCTTGCTGTCTCC-AGCTCCTTTATGAACAAACCCTGCAGAAAGAGCTCTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1443390 117 - 10304083 GAGAGGTGAGAACTAAGTGCAGGCTGGGCGATAACAGGAATGCACTTAAATGTCGTGGACT--CAGCATTCTTGCTGTCTCC-AGCTCCTTTATGAACAAACCCTGCAGAAAGAGCTCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1523480 117 - 107702431 GAGAGGTGAGAACGAAGTGCAGGCTGGGCGGTAACAGGAATGCACTTAAATGTTGTGGACT--CAGCATTCTTGCTGTCTCC-AGCTCCTTTATGAACAAACCCTGCAGAAAGAGCTCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1015848 117 - 2200435 GAGAGGTGAGAACTAAGTGCAGGCTGGGCGATAACAGGAATGCACTTAAATGCCGTGGACT--CAGCATTCTTGCTGTCTCC-AGCTCCTTTATGAACAAACCCTGCAGAAAGAGCTCTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1446574 117 - 13651311 GAGAGGCGAGAACTAAGTGCAGGCTGGGCGATAACAGGAATGCACTTAAATATCATGAACT--CAGCATTCTTGCTGTCTCC-AGCTCCTTTATGAACAAACCCTACAGAAAGAGCTCTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1436107 117 - 108792865 TAGAGGCAAGAACTGAGTGCGGGCTGGGCCATAGCAGGAGTCCCCTTCGACGCCCTGGACT--CAGCATTCTTGCTGTCTCC-AGCTCCTTTATGAGCAAACCCTGCAAGAAGAGCTCTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1265035 116 - 7082604 TAGAGGCAGGAACTGA-TGCGGGCTGAGCCATGGCAGGAATCCCCTTAGATGCCCCGGACT--CAGCATTCTTGCCGTCTCC-AGCTCCTGTATGAGCAAACCCTGCAAGAAGAGCTCTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1358812 115 + 1864846 TAGAGGCAAGAACTGA-TGCGGGCTGGGCAAC-GTAGGAATCCCTTTAGACGCTGTGGACT--CAGCATTCTTGCCGTCTCC-AGCTCCTGCATGAGCAAACCCTGCAAGAAGAGCTCTG i cebCap1.NW_016107827v1 C 0 I 9 s aotNan1.NW_018513311v1 177450 117 + 287728 TAGAGGCAGGAACCGAGTGCGGGCTGGGCGATCGCAGGAATCCCCTTAGACGCCCTGGACT--CAGCATTCTTGCTGTCTCC-AGCTCCTTGATGAGCAAACCCTGCAAGAAGAGCTCTG i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1783888 120 + 4416731 AAGAGACAAGAAATTAATATAGGTTTGGTAATAGGGTGAATCCACTTAAGTGCCTTGGATTGGGAGTGTTATTGCTCTCTCCAAGCTCGTTTATGAGCAAACTCTCCAATATGACCCCAG i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e otoGar3.GL873658 955934 136 + 5252280 I a score=31435.000000 s hg38.chr2_KI270774v1_alt 175787 6 + 223625 GCGTCC s panTro5.chr2A 1472590 6 + 111504155 GCGTCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411783 6 + 114371477 GCGTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435583 6 + 1464242 GCGTCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160688 6 + 81552678 GCATCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1488463 6 + 108979918 GCTTCT i rheMac8.chr13 C 0 T 3 s macFas5.chr13 1460884 6 - 111193037 GCTTCT i macFas5.chr13 C 0 T 9 s macNem1.NW_012011978v1 1489277 6 + 3644372 GCTTCT i macNem1.NW_012011978v1 C 0 T 3 s cerAty1.NW_012000820v1 1443507 6 - 10304083 GCTTCT i cerAty1.NW_012000820v1 C 0 T 3 s chlSab2.chr14 1523597 6 - 107702431 GCTTCT i chlSab2.chr14 C 0 T 3 s manLeu1.NW_012103754v1 1015965 6 - 2200435 GCTTCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1446691 6 - 13651311 GCTTCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1436224 6 - 108792865 ACGCCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1265151 6 - 7082604 ATGCCC i saiBol1.JH378218 C 0 T 2 s aotNan1.NW_018513311v1 177567 6 + 287728 ACGCCC i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1784008 6 + 4416731 AAGTCT i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1358927 9 + 1864846 I e otoGar3.GL873658 955934 136 + 5252280 I a score=18174.000000 s hg38.chr2_KI270774v1_alt 175793 10 + 223625 GAGCTGGAAC s panTro5.chr2A 1472596 10 + 111504155 GAGCTGGAAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411789 10 + 114371477 GAGCTGGAAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435589 10 + 1464242 GAGCTGGAAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160694 10 + 81552678 GAGCTGGAAC i nomLeu3.chr19 C 0 T 19 s calJac3.chr14 1436230 10 - 108792865 GAGCTGGAAT i calJac3.chr14 C 0 C 0 s dasNov3.JH576208 1784014 10 + 4416731 GTGCTGGAAC i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 177573 0 + 287728 C e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1265157 2 - 7082604 T e cebCap1.NW_016107827v1 1358927 9 + 1864846 I e otoGar3.GL873658 955934 136 + 5252280 I e colAng1.NW_012118821v1 1446697 0 - 13651311 C e manLeu1.NW_012103754v1 1015971 0 - 2200435 C e chlSab2.chr14 1523603 3 - 107702431 T e cerAty1.NW_012000820v1 1443513 3 - 10304083 T e macNem1.NW_012011978v1 1489283 3 + 3644372 T e macFas5.chr13 1460890 9 - 111193037 T e rheMac8.chr13 1488469 3 + 108979918 T a score=39300.000000 s hg38.chr2_KI270774v1_alt 175803 53 + 223625 ATTCTAGCCTGGCAAACTGCCGGGCAGTGTCACAGGGTGGGACAGGACTCTGC s panTro5.chr2A 1472606 53 + 111504155 ATCCTAGCCTGGCAAACTGCCGGGCAGTGTCACAGGGTGGGACAGGACTCTGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411799 53 + 114371477 ATCCTAGCCTGGCAAACTGCCGGGCAGTGTCACAGGGTGGGACAGGACTCTGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435599 53 + 1464242 ATCCTAGCCTGGCAAACTGCCAGGCAGTGTCACAGGGTGGGACAGGACTCTGC i gorGor5.CYUI01015607v1 C 0 C 0 s calJac3.chr14 1436240 53 - 108792865 ATCCTAGCCTGGCAAATGGCCGGGCAGTGCCTTGGCTTGAGACGGGACTCTGC i calJac3.chr14 C 0 C 0 s dasNov3.JH576208 1784024 22 + 4416731 ATTCTAACATATTGAACT-----------------------------CTTT-- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 177573 0 + 287728 C e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1265157 2 - 7082604 T e cebCap1.NW_016107827v1 1358927 9 + 1864846 I e otoGar3.GL873658 955934 136 + 5252280 I e colAng1.NW_012118821v1 1446697 0 - 13651311 C e manLeu1.NW_012103754v1 1015971 0 - 2200435 C e chlSab2.chr14 1523603 3 - 107702431 T e cerAty1.NW_012000820v1 1443513 3 - 10304083 T e macNem1.NW_012011978v1 1489283 3 + 3644372 T e macFas5.chr13 1460890 9 - 111193037 T e rheMac8.chr13 1488469 3 + 108979918 T e nomLeu3.chr19 1160704 19 + 81552678 T a score=729.000000 s hg38.chr2_KI270774v1_alt 175856 3 + 223625 CCG- s panTro5.chr2A 1472659 3 + 111504155 CTG- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411852 3 + 114371477 CTG- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435652 3 + 1464242 CCG- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160685 3 + 81552678 CTG- i nomLeu3.chr19 T 19 C 0 s macFas5.chr13 1460881 3 - 111193037 CTG- i macFas5.chr13 T 9 C 0 s calJac3.chr14 1436293 3 - 108792865 CAG- i calJac3.chr14 C 0 T 72 s dasNov3.JH576208 1784046 3 + 4416731 -AGG i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 177573 0 + 287728 C e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1265157 2 - 7082604 T e cebCap1.NW_016107827v1 1358927 9 + 1864846 I e otoGar3.GL873658 955934 136 + 5252280 I e colAng1.NW_012118821v1 1446697 0 - 13651311 C e manLeu1.NW_012103754v1 1015971 0 - 2200435 C e chlSab2.chr14 1523603 3 - 107702431 T e cerAty1.NW_012000820v1 1443513 3 - 10304083 T e macNem1.NW_012011978v1 1489283 3 + 3644372 T e rheMac8.chr13 1488469 3 + 108979918 T a score=5010.000000 s hg38.chr2_KI270774v1_alt 175859 3 + 223625 GCA s panTro5.chr2A 1472662 3 + 111504155 GCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411855 3 + 114371477 GCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435655 3 + 1464242 GCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160688 3 + 81552678 GCA i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1460884 3 - 111193037 GCT i macFas5.chr13 C 0 C 0 s calJac3.chr14 1436224 3 - 108792865 ACG i calJac3.chr14 T 72 C 0 s dasNov3.JH576208 1784049 3 + 4416731 GCA i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 177573 0 + 287728 C e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1265157 2 - 7082604 T e cebCap1.NW_016107827v1 1358927 9 + 1864846 I e otoGar3.GL873658 955934 136 + 5252280 I e colAng1.NW_012118821v1 1446697 0 - 13651311 C e manLeu1.NW_012103754v1 1015971 0 - 2200435 C e chlSab2.chr14 1523603 3 - 107702431 T e cerAty1.NW_012000820v1 1443513 3 - 10304083 T e macNem1.NW_012011978v1 1489283 3 + 3644372 T e rheMac8.chr13 1488469 3 + 108979918 T a score=4664.000000 s hg38.chr2_KI270774v1_alt 175862 1 + 223625 T s panTro5.chr2A 1472665 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411858 1 + 114371477 T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435658 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160691 1 + 81552678 T i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1488466 1 + 108979918 T i rheMac8.chr13 T 3 C 0 s macFas5.chr13 1460887 1 - 111193037 T i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1489280 1 + 3644372 T i macNem1.NW_012011978v1 T 3 C 0 s cerAty1.NW_012000820v1 1443510 1 - 10304083 T i cerAty1.NW_012000820v1 T 3 C 0 s chlSab2.chr14 1523600 1 - 107702431 T i chlSab2.chr14 T 3 C 0 s calJac3.chr14 1436227 1 - 108792865 C i calJac3.chr14 C 0 C 0 s dasNov3.JH576208 1784052 1 + 4416731 T i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 177573 0 + 287728 C e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1265157 2 - 7082604 T e cebCap1.NW_016107827v1 1358927 9 + 1864846 I e otoGar3.GL873658 955934 136 + 5252280 I e colAng1.NW_012118821v1 1446697 0 - 13651311 C e manLeu1.NW_012103754v1 1015971 0 - 2200435 C a score=7800.000000 s hg38.chr2_KI270774v1_alt 175863 1 + 223625 C s panTro5.chr2A 1472666 1 + 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411859 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435659 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160692 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1488467 1 + 108979918 C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1460888 1 - 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1489281 1 + 3644372 C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1443511 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1523601 1 - 107702431 C i chlSab2.chr14 C 0 C 0 s calJac3.chr14 1436228 1 - 108792865 C i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1265155 1 - 7082604 C i saiBol1.JH378218 T 2 C 0 s dasNov3.JH576208 1784053 1 + 4416731 C i dasNov3.JH576208 C 0 I 86 e aotNan1.NW_018513311v1 177573 0 + 287728 C e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1358927 9 + 1864846 I e otoGar3.GL873658 955934 136 + 5252280 I e colAng1.NW_012118821v1 1446697 0 - 13651311 C e manLeu1.NW_012103754v1 1015971 0 - 2200435 C a score=1826.000000 s hg38.chr2_KI270774v1_alt 175864 1 + 223625 T s panTro5.chr2A 1472667 1 + 111504155 C i panTro5.chr2A C 0 T 72 s panPan2.chr2A 1411860 1 + 114371477 C i panPan2.chr2A C 0 T 72 s gorGor5.CYUI01015607v1 1435660 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160693 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1488468 1 + 108979918 T i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1460889 1 - 111193037 T i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1489282 1 + 3644372 T i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1443512 1 - 10304083 T i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1523602 1 - 107702431 T i chlSab2.chr14 C 0 C 0 s calJac3.chr14 1436229 1 - 108792865 C i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1265156 1 - 7082604 C i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 177573 0 + 287728 C e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1358927 9 + 1864846 I e otoGar3.GL873658 955934 136 + 5252280 I e dasNov3.JH576208 1784054 86 + 4416731 I e colAng1.NW_012118821v1 1446697 0 - 13651311 C e manLeu1.NW_012103754v1 1015971 0 - 2200435 C a score=336399.000000 s hg38.chr2_KI270774v1_alt 175865 61 + 223625 GAGCTGGAATATCCTAGCCTGGCAAACTGCTGGGCAGTGTCACAGGGTGGGACAGGACTCT s panTro5.chr2A 1472596 61 + 111504155 GAGCTGGAACATCCTAGCCTGGCAAACTGCCGGGCAGTGTCACAGGGTGGGACAGGACTCT i panTro5.chr2A T 72 C 0 s panPan2.chr2A 1411789 61 + 114371477 GAGCTGGAACATCCTAGCCTGGCAAACTGCCGGGCAGTGTCACAGGGTGGGACAGGACTCT i panPan2.chr2A T 72 C 0 s gorGor5.CYUI01015607v1 1435661 61 + 1464242 GAGCTGGAATATCCTAGCCTGGCAAACTGCCGGGCAGTGTCACAGGGTGGGACAGGACTCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160694 61 + 81552678 GAGCTGGAACATCCTAGCCTGGCAAACTGCCGGGCAGTGTCACAGGGTGGGACAGGACTCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1488469 61 + 108979918 GAGCTGGAATAGCCTAGCCTGGCAAACGGCTGGGCAGTGTCACAGGGTGGGACGGGACTCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1460890 61 - 111193037 GAGCTGGAATAGCCTAGCCTGGCAAACGGCTGGGCAGTGTCACAGGGTGGGACGGGACTCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1489283 61 + 3644372 GAGCTGGAATAGCCTAGCCTGGCAAACGGCTGGGCAGTGTCACAGGGTGGGACGGGACTCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1443513 61 - 10304083 GAGCTGGAATATCCTAGCCTGGCAAACAGCCGGGCAGTGTCACAGGGTGGGACGGGACTCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1523603 61 - 107702431 GAGCTGGAATGTCCTAGCCTGGCAAACGGCCGGGCAGTGTCACAGGGTGGGACGGGACTCT i chlSab2.chr14 C 0 C 0 s calJac3.chr14 1436230 61 - 108792865 GAGCTGGAATATCCTAGCCTGGCAAATGGCCGGGCAGTGCCTTGGCTTGAGACGGGACTCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1265157 61 - 7082604 GAGCTGGAATATCCTAGCCTGGCAAAAGGCCGGGCAGTGCCATGGCTTGGGGCGGGACTCT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 177573 0 + 287728 C e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1358927 9 + 1864846 I e otoGar3.GL873658 955934 136 + 5252280 I e dasNov3.JH576208 1784054 86 + 4416731 I e colAng1.NW_012118821v1 1446697 0 - 13651311 C e manLeu1.NW_012103754v1 1015971 0 - 2200435 C a score=7439.000000 s hg38.chr2_KI270774v1_alt 175926 2 + 223625 -GC s panTro5.chr2A 1472657 2 + 111504155 -GC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411850 2 + 114371477 -GC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435722 2 + 1464242 -GC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160755 2 + 81552678 -GT i nomLeu3.chr19 C 0 T 72 s rheMac8.chr13 1488530 2 + 108979918 -GC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1460951 2 - 111193037 -GC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1489344 2 + 3644372 -GC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1443574 2 - 10304083 -GC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1523664 2 - 107702431 -GC i chlSab2.chr14 C 0 C 0 s calJac3.chr14 1436291 2 - 108792865 -GC i calJac3.chr14 C 0 T 72 s saiBol1.JH378218 1265218 2 - 7082604 -GC i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 956070 2 + 5252280 GG- i otoGar3.GL873658 I 136 C 0 e aotNan1.NW_018513311v1 177573 0 + 287728 C e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1358927 9 + 1864846 I e dasNov3.JH576208 1784054 86 + 4416731 I e colAng1.NW_012118821v1 1446697 0 - 13651311 C e manLeu1.NW_012103754v1 1015971 0 - 2200435 C a score=7800.000000 s hg38.chr2_KI270774v1_alt 175928 1 + 223625 C s panTro5.chr2A 1472659 1 + 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411852 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435724 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160685 1 + 81552678 C i nomLeu3.chr19 T 72 C 0 s rheMac8.chr13 1488532 1 + 108979918 C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1460953 1 - 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1489346 1 + 3644372 C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1443576 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1523666 1 - 107702431 C i chlSab2.chr14 C 0 C 0 s calJac3.chr14 1436221 1 - 108792865 C i calJac3.chr14 T 72 C 0 s saiBol1.JH378218 1265220 1 - 7082604 C i saiBol1.JH378218 C 0 T 66 s otoGar3.GL873658 956072 1 + 5252280 C i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 177573 0 + 287728 C e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1358927 9 + 1864846 I e dasNov3.JH576208 1784054 86 + 4416731 I e colAng1.NW_012118821v1 1446697 0 - 13651311 C e manLeu1.NW_012103754v1 1015971 0 - 2200435 C a score=1925.000000 s hg38.chr2_KI270774v1_alt 175929 1 + 223625 C s panTro5.chr2A 1472660 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411853 1 + 114371477 T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435725 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160686 1 + 81552678 T i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1488533 1 + 108979918 C i rheMac8.chr13 C 0 T 65 s macFas5.chr13 1460954 1 - 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1489347 1 + 3644372 C i macNem1.NW_012011978v1 C 0 T 65 s cerAty1.NW_012000820v1 1443577 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 T 65 s chlSab2.chr14 1523667 1 - 107702431 C i chlSab2.chr14 C 0 T 65 s calJac3.chr14 1436222 1 - 108792865 T i calJac3.chr14 C 0 C 0 s otoGar3.GL873658 956073 1 + 5252280 C i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 177573 0 + 287728 C e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1265221 66 - 7082604 T e cebCap1.NW_016107827v1 1358927 9 + 1864846 I e dasNov3.JH576208 1784054 86 + 4416731 I e colAng1.NW_012118821v1 1446697 0 - 13651311 C e manLeu1.NW_012103754v1 1015971 0 - 2200435 C a score=1401.000000 s hg38.chr2_KI270774v1_alt 175930 3 + 223625 -GGC s panTro5.chr2A 1472661 3 + 111504155 -GGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411854 3 + 114371477 -GGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435726 3 + 1464242 -GGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160687 3 + 81552678 -GGC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1460955 3 - 111193037 -TGC i macFas5.chr13 C 0 T 72 s calJac3.chr14 1436223 3 - 108792865 -GAC i calJac3.chr14 C 0 C 0 s otoGar3.GL873658 956074 3 + 5252280 TGA- i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 177573 0 + 287728 C e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1265221 66 - 7082604 T e cebCap1.NW_016107827v1 1358927 9 + 1864846 I e dasNov3.JH576208 1784054 86 + 4416731 I e colAng1.NW_012118821v1 1446697 0 - 13651311 C e manLeu1.NW_012103754v1 1015971 0 - 2200435 C e chlSab2.chr14 1523668 65 - 107702431 T e cerAty1.NW_012000820v1 1443578 65 - 10304083 T e macNem1.NW_012011978v1 1489348 65 + 3644372 T e rheMac8.chr13 1488534 65 + 108979918 T a score=1339.000000 s hg38.chr2_KI270774v1_alt 175933 2 + 223625 AT s panTro5.chr2A 1472664 2 + 111504155 AT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411857 2 + 114371477 AT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435729 2 + 1464242 AT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160690 2 + 81552678 AT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1460886 1 - 111193037 -T i macFas5.chr13 T 72 C 0 s calJac3.chr14 1436226 2 - 108792865 GC i calJac3.chr14 C 0 C 0 s otoGar3.GL873658 956077 2 + 5252280 AG i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 177573 0 + 287728 C e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1265221 66 - 7082604 T e cebCap1.NW_016107827v1 1358927 9 + 1864846 I e dasNov3.JH576208 1784054 86 + 4416731 I e colAng1.NW_012118821v1 1446697 0 - 13651311 C e manLeu1.NW_012103754v1 1015971 0 - 2200435 C e chlSab2.chr14 1523668 65 - 107702431 T e cerAty1.NW_012000820v1 1443578 65 - 10304083 T e macNem1.NW_012011978v1 1489348 65 + 3644372 T e rheMac8.chr13 1488534 65 + 108979918 T a score=4309.000000 s hg38.chr2_KI270774v1_alt 175935 2 + 223625 CC s panTro5.chr2A 1472666 2 + 111504155 CC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411859 2 + 114371477 CC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435731 2 + 1464242 CC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160692 2 + 81552678 CC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1460887 2 - 111193037 TC i macFas5.chr13 C 0 I 1 s calJac3.chr14 1436228 2 - 108792865 CC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1265155 2 - 7082604 CC i saiBol1.JH378218 T 66 C 0 s otoGar3.GL873658 956079 2 + 5252280 TT i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 177573 0 + 287728 C e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1358927 9 + 1864846 I e dasNov3.JH576208 1784054 86 + 4416731 I e colAng1.NW_012118821v1 1446697 0 - 13651311 C e manLeu1.NW_012103754v1 1015971 0 - 2200435 C e chlSab2.chr14 1523668 65 - 107702431 T e cerAty1.NW_012000820v1 1443578 65 - 10304083 T e macNem1.NW_012011978v1 1489348 65 + 3644372 T e rheMac8.chr13 1488534 65 + 108979918 T a score=296277.000000 s hg38.chr2_KI270774v1_alt 175937 64 + 223625 GAGCTGGAATATCCTAGCCTGGCAAACTGCCGGGCAGTGTCACAGGGTGGGACAGGACTCTGCC s panTro5.chr2A 1472668 64 + 111504155 GAGCTGGAACATCCTAGCCTGGCAAACTGCCGGGCAGTGTCACAGGGTGGGACAGGACTCTGCC i panTro5.chr2A C 0 T 64 s panPan2.chr2A 1411861 64 + 114371477 GAGCTGGAACATCCTAGCCTGGCAAACTGCCGGGCAGTGTCACAGGGTGGGACAGGACTCTGCC i panPan2.chr2A C 0 T 64 s gorGor5.CYUI01015607v1 1435733 64 + 1464242 GAGCTGGAACATCCTAGCCTGGCAAACTGCCGGGCAGTGTCACAGGGTGGGACAGGACTCTGCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160694 64 + 81552678 GAGCTGGAACATCCTAGCCTGGCAAACTGCCGGGCAGTGTCACAGGGTGGGACAGGACTCTGTC i nomLeu3.chr19 C 0 T 54 s macFas5.chr13 1460890 64 - 111193037 GAGCTGGAATAGCCTAGCCTGGCAAACGGCTGGGCAGTGTCACAGGGTGGGACGGGACTCTGCC i macFas5.chr13 I 1 T 64 s cerAty1.NW_012000820v1 1443513 64 - 10304083 GAGCTGGAATATCCTAGCCTGGCAAACAGCCGGGCAGTGTCACAGGGTGGGACGGGACTCTGCC i cerAty1.NW_012000820v1 T 65 T 64 s chlSab2.chr14 1523603 64 - 107702431 GAGCTGGAATGTCCTAGCCTGGCAAACGGCCGGGCAGTGTCACAGGGTGGGACGGGACTCTGCC i chlSab2.chr14 T 65 T 64 s manLeu1.NW_012103754v1 1015971 64 - 2200435 GAGCTGGAATATCCTAGCCTGGCAAACAGCCAGGCAGTGTCACAGGGTGGGACGGGACTCTGCC i manLeu1.NW_012103754v1 C 0 T 64 s calJac3.chr14 1436230 64 - 108792865 GAGCTGGAATATCCTAGCCTGGCAAATGGCCGGGCAGTGCCTTGGCTTGAGACGGGACTCTGCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1265157 64 - 7082604 GAGCTGGAATATCCTAGCCTGGCAAAAGGCCGGGCAGTGCCATGGCTTGGGGCGGGACTCTGCC i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 956081 48 + 5252280 TTGCTGGAATGTTCTGTCATGGAGAA-----------TGCCACCAGGCCAGACAGTGCA----- i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 177573 0 + 287728 C e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1358927 9 + 1864846 I e dasNov3.JH576208 1784054 86 + 4416731 I e colAng1.NW_012118821v1 1446697 0 - 13651311 C e macNem1.NW_012011978v1 1489348 65 + 3644372 T e rheMac8.chr13 1488534 65 + 108979918 T a score=1017.000000 s hg38.chr2_KI270774v1_alt 176001 4 + 223625 GGGC s gorGor5.CYUI01015607v1 1435797 4 + 1464242 CGGC i gorGor5.CYUI01015607v1 C 0 C 0 s calJac3.chr14 1436294 4 - 108792865 AGGC i calJac3.chr14 C 0 T 2 s saiBol1.JH378218 1265221 4 - 7082604 AGAC i saiBol1.JH378218 C 0 T 68 s otoGar3.GL873658 956129 4 + 5252280 GAGT i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 177573 0 + 287728 C e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1358927 9 + 1864846 I e dasNov3.JH576208 1784054 86 + 4416731 I e colAng1.NW_012118821v1 1446697 0 - 13651311 C e manLeu1.NW_012103754v1 1016035 64 - 2200435 T e chlSab2.chr14 1523667 64 - 107702431 T e cerAty1.NW_012000820v1 1443577 64 - 10304083 T e macNem1.NW_012011978v1 1489348 65 + 3644372 T e macFas5.chr13 1460954 64 - 111193037 T e rheMac8.chr13 1488534 65 + 108979918 T e nomLeu3.chr19 1160758 54 + 81552678 T e panPan2.chr2A 1411925 64 + 114371477 T e panTro5.chr2A 1472732 64 + 111504155 T a score=168.000000 s hg38.chr2_KI270774v1_alt 176005 4 + 223625 GTCG s gorGor5.CYUI01015607v1 1435801 4 + 1464242 ATCT i gorGor5.CYUI01015607v1 C 0 C 0 s otoGar3.GL873658 956133 4 + 5252280 TTCT i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 177573 0 + 287728 C e mm10.chr12 90030866 3028 - 120129022 I e saiBol1.JH378218 1265225 68 - 7082604 T e cebCap1.NW_016107827v1 1358927 9 + 1864846 I e dasNov3.JH576208 1784054 86 + 4416731 I e calJac3.chr14 1436298 2 - 108792865 T e colAng1.NW_012118821v1 1446697 0 - 13651311 C e manLeu1.NW_012103754v1 1016035 64 - 2200435 T e chlSab2.chr14 1523667 64 - 107702431 T e cerAty1.NW_012000820v1 1443577 64 - 10304083 T e macNem1.NW_012011978v1 1489348 65 + 3644372 T e macFas5.chr13 1460954 64 - 111193037 T e rheMac8.chr13 1488534 65 + 108979918 T e nomLeu3.chr19 1160758 54 + 81552678 T e panPan2.chr2A 1411925 64 + 114371477 T e panTro5.chr2A 1472732 64 + 111504155 T a score=23218.000000 s hg38.chr2_KI270774v1_alt 176009 3 + 223625 GAG s panTro5.chr2A 1472668 3 + 111504155 GAG i panTro5.chr2A T 64 C 0 s panPan2.chr2A 1411861 3 + 114371477 GAG i panPan2.chr2A T 64 C 0 s gorGor5.CYUI01015607v1 1435805 3 + 1464242 GAG i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1488469 3 + 108979918 GAG i rheMac8.chr13 T 65 C 0 s macFas5.chr13 1460890 3 - 111193037 GAG i macFas5.chr13 T 64 C 0 s macNem1.NW_012011978v1 1489283 3 + 3644372 GAG i macNem1.NW_012011978v1 T 65 C 0 s cerAty1.NW_012000820v1 1443513 3 - 10304083 GAG i cerAty1.NW_012000820v1 T 64 C 0 s chlSab2.chr14 1523603 3 - 107702431 GAG i chlSab2.chr14 T 64 C 0 s manLeu1.NW_012103754v1 1015971 3 - 2200435 GAG i manLeu1.NW_012103754v1 T 64 C 0 s colAng1.NW_012118821v1 1446697 3 - 13651311 GAG i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1265157 3 - 7082604 GAG i saiBol1.JH378218 T 68 C 0 s aotNan1.NW_018513311v1 177573 3 + 287728 GAG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 956137 1 + 5252280 --G i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e cebCap1.NW_016107827v1 1358927 9 + 1864846 I e dasNov3.JH576208 1784054 86 + 4416731 I e calJac3.chr14 1436298 2 - 108792865 T e nomLeu3.chr19 1160758 54 + 81552678 T a score=57505.000000 s hg38.chr2_KI270774v1_alt 176012 7 + 223625 CTGGAAT s panTro5.chr2A 1472671 7 + 111504155 CTGGAAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411864 7 + 114371477 CTGGAAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435808 7 + 1464242 CTGGAAT i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1488472 7 + 108979918 CTGGAAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1460893 7 - 111193037 CTGGAAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1489286 7 + 3644372 CTGGAAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1443516 7 - 10304083 CTGGAAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1523606 7 - 107702431 CTGGAAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1015974 7 - 2200435 CTGGAAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1446700 7 - 13651311 CTGGAAT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1265160 7 - 7082604 CTGGAAT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1358936 7 + 1864846 CTGGAAT i cebCap1.NW_016107827v1 I 9 C 0 s aotNan1.NW_018513311v1 177576 7 + 287728 CTGGAAT i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e otoGar3.GL873658 956138 0 + 5252280 C e dasNov3.JH576208 1784054 86 + 4416731 I e calJac3.chr14 1436298 2 - 108792865 T e nomLeu3.chr19 1160758 54 + 81552678 T a score=331388.000000 s hg38.chr2_KI270774v1_alt 176019 40 + 223625 ATCCTAGCCTGGCAAACTGCCAGGCAGTGTCACAGGGTGG s panTro5.chr2A 1472678 40 + 111504155 ATCCTAGCCTGGCAAACTGCCGGGCAGTGTCACAGGGTGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411871 40 + 114371477 ATCCTAGCCTGGCAAACTGCCGGGCAGTGTCACAGGGTGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435815 40 + 1464242 ATCCTAGCCTGGCAAACTGCCGGGCAGTGTCACAGGGTGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160704 40 + 81552678 ATCCTAGCCTGGCAAACTGCCGGGCAGTGTCACAGGGTGG i nomLeu3.chr19 T 54 C 0 s rheMac8.chr13 1488479 40 + 108979918 AGCCTAGCCTGGCAAACGGCTGGGCAGTGTCACAGGGTGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1460900 40 - 111193037 AGCCTAGCCTGGCAAACGGCTGGGCAGTGTCACAGGGTGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1489293 40 + 3644372 AGCCTAGCCTGGCAAACGGCTGGGCAGTGTCACAGGGTGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1443523 40 - 10304083 ATCCTAGCCTGGCAAACAGCCGGGCAGTGTCACAGGGTGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1523613 40 - 107702431 GTCCTAGCCTGGCAAACGGCCGGGCAGTGTCACAGGGTGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1015981 40 - 2200435 ATCCTAGCCTGGCAAACAGCCAGGCAGTGTCACAGGGTGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1446707 40 - 13651311 ATCCTAGCCTGGCAAACGGCCAGGCAGTGTCACAGGGTGG i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1265167 40 - 7082604 ATCCTAGCCTGGCAAAAGGCCGGGCAGTGCCATGGCTTGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1358943 40 + 1864846 ATCCTAGCCTGGCAAATGGCCGGGCAGTGCCATGGCTTGG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 177583 40 + 287728 ATCCTAGCCTGGCAAATGGCCGGGCAGTGCCATGGCTTGG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 956138 13 + 5252280 ---------------------------TGTGACTGGGATG i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90030866 3028 - 120129022 I e dasNov3.JH576208 1784054 86 + 4416731 I e calJac3.chr14 1436298 2 - 108792865 T a score=129917.000000 s hg38.chr2_KI270774v1_alt 176059 16 + 223625 GACA-GGACTCTGCCCT- s panTro5.chr2A 1472718 16 + 111504155 GACA-GGACTCTGCCCT- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411911 16 + 114371477 GACA-GGACTCTGCCCT- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435855 16 + 1464242 GACA-GGACTCTGCCCT- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160744 16 + 81552678 GACA-GGACTCTGTCCT- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1488519 16 + 108979918 GACG-GGACTCTGCCCT- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1460940 16 - 111193037 GACG-GGACTCTGCCCT- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1489333 16 + 3644372 GACG-GGACTCTGCCCT- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1443563 16 - 10304083 GACG-GGACTCTGCCCT- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1523653 16 - 107702431 GACG-GGACTCTGCCCT- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1016021 16 - 2200435 GACG-GGACTCTGCCTT- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1446747 16 - 13651311 GATG-GGACTCTGCCCT- i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1265207 16 - 7082604 GGCG-GGACTCTGCCAG- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1358983 16 + 1864846 GACG-GGACTCTGCCAG- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 177623 16 + 287728 GACG-GGACTCTGCCAG- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 956151 14 + 5252280 AATGAGGGCCCAGT---- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90033894 17 - 120129022 GACA-GGGCTGTGTCTCT i mm10.chr12 I 3028 C 0 e dasNov3.JH576208 1784054 86 + 4416731 I e calJac3.chr14 1436298 2 - 108792865 T a score=298134.000000 s hg38.chr2_KI270774v1_alt 176075 33 + 223625 GCTGCGCTTCCAGTCTCGG-GGACCATGGCATGA s panTro5.chr2A 1472734 33 + 111504155 GCTGCGCTTCCAGTCTCGG-GGACCATGGCATGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411927 33 + 114371477 GCTGCGCTTCCAGTCTCGG-GGACCATGGCATGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435871 33 + 1464242 GCTGCGCTTCCAGTCTCGG-GGACCATGGCATGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160760 33 + 81552678 GCTGCGCTTCCAGTCTCGG-GGACCATGACGTGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1488535 33 + 108979918 GCTGTGCTTCCCGTCTTGG-GGACCACGGCATGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1460956 33 - 111193037 GCTGTGCTTCCCGTCTTGG-GGACCACGGCATGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1489349 33 + 3644372 GCTGTGCTTCCCATCTTGG-GGACCACGGCATGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1443579 33 - 10304083 GCTACGCTTCCCGTCTTGG-GGACCACGGCATGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1523669 33 - 107702431 GCTGTGCTTCCCGTCTTGG-GGACCATGGCATGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1016037 33 - 2200435 GCTGTGCTTCCCGTCTTGG-GGACCACGGCATGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1446763 33 - 13651311 GCTGTGCTTCCTCTCTCGG-GGACCATGGCATGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1436296 33 - 108792865 GCCACGCTTCCTGTCTTGT-GGACCACAGCGTGA i calJac3.chr14 T 2 C 0 s saiBol1.JH378218 1265223 33 - 7082604 ACTATGCTTCCCATCTTGC-GGACCACAGCGTGA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1358999 33 + 1864846 GCTGCGCTTCCCGTCTTGT-GGACCACAGCCTGA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 177639 33 + 287728 GCTGCACTTCCCGTCTTGT-GGACCAGAGCATGA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 956165 34 + 5252280 GCTGCCCTCCCAGCTTTGGAGGGAGGCAGCGGGC i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90033911 32 - 120129022 GCAACCCTGGCT-TCCAGG-GGTCAGCAGAACCC i mm10.chr12 C 0 C 0 e dasNov3.JH576208 1784054 86 + 4416731 I a score=4724314.000000 s hg38.chr2_KI270774v1_alt 176108 404 + 223625 GTGAGATGGGCTGAACAAAAGTT--CAGTTCTGTGAGAGAAACCCTGCA---GCCTCTCCCCTGTGCAGGTTACAATGAGTGGAGGGAGTTCTGCGGCCTGCCTCGCCTGGAGACCCCCGCTGACCTGAGCACAGCCATCGCCAGCAGGAGCGTGGCCGACAAGATCCTGGACTTGTACAAGCATCCTGACAACATCGATGTCTGGCTGGGAGGCTTAGCTGAAAACTTCCTCCCCAGGGCTCGGACAGGGCCCCTGTTTGCCTGTCTCATTGGGAAGCAGATGAAGGCTCTGCGGGACGGTGACTGGTACGTTCCTAT-CCAGAGCGT-CTTCCTTCACGTTCTGCACAGAGGCAGGTGGTCTGCGTTggttct----gaagccagccagacctgcattcacattccggctcca s panTro5.chr2A 1472767 404 + 111504155 GTGAGATGGGCTGAACAAAAGTT--CAGTTCTGTGAGAGAAACCCTGCA---GCCTCTCCCCTGTGCAGGTTACAATGAGTGGAGGGAGTTCTGCGGCCTGCCTCGCCTGGAGACCCCCGCTGACCTGAGCACAGCCATCACCAGCAGGAGCGTGGCCGACAAGATCCTGGACTTGTACAAGCATCCTGACAACGTCGATGTCTGGCTGGGAGGCTTAGCTGAAAACTTCCTCCCCAGGGCTCGGACAGGGCCCCTGTTTGCCTGTCTCATTGGGAAGCAGATGAAGGCTCTGCGGGACGGTGACTGGTACGTTCCTAT-CCAGAGCAT-CTTCCTTCACGTTCTGCACAgaggcaggtggtctgcgttggttct----gaagccagccagacctgcgttcaaatcccggctcca i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1411960 404 + 114371477 GTGAGATGGGCTGAACAAAAGTT--CAGTTCTGTGAGAGAAACCCTGCA---GCCTCTCCCCTGTGCAGGTTACAATGAGTGGAGGGAGTTCTGCGGCCTGCCTCGCCTGGAGACCCCCGCTGACCTGAGCACAGCCATCGCCAGCAGGAGCGTGGCCGACAAGATCCTGGACTTGTACAAGCATCCTGACAACGTCGATGTCTGGCTGGGGGGCCTAGCTGAAAACTTCCTCCCCAGGGCTCGGACAGGGCCCCTGTTTGCCTGTCTCATTGGGAAGCAGATGAAGGCTCTGCGGGACGGTGACTGGTACGTTCCTAT-CCAGAGCAT-CTTCCTTCACGTTCTGCACAgaggcaggtggtctgcgttggttct----gaagccagccagacctgcattcaaatcccggctcca i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1435904 404 + 1464242 GTGAGATGGGTTGAACAAAAGTT--CAGTACTGTGAGAGAAACCCTGCA---GCCTCTCCCCTGTGCAGGTTACAATGAGTGGAGGGAGTTCTGCGGCCTGCCTCGCCTGGAGACCCCCGCTGACCTGAGCACAGCCATCGCCAGCAGGAGCGTGGCCGACAAGATCCTGGACTTGTACAAGCATCCTGACAACATCGATGTCTGGCTGGGAGGCTTAGCTGAAAACTTCCTCCCCAGGGCTCGGACAGGGCCCCTGTTTGCCTGTCTCATTGGGAAGCAGATGAAGGCTCTGCGGGACGGTGACTGGTACGTTCCTAT-CCAGAGCAT-CTTCCTTCACGTTCTGCACAgaggcaggtggtctgcgttggttct----gaagccagccagacctgcattcaaatcccggctcca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1160793 378 + 81552678 GTGAGATGGGCTGAACAAAGGTT--CAGGTCTGTGAGAGAAACCCTGCA---GCCTCTCCCCTGTGCAGGTTACAATGAGTGGAGGGAGTTCTGCGGCCTGCCTCGCCTGGAGACCCCCGCTGACCTGAGCACAGCCATCGCCAGCAGGAGCGTGGCCGACAAGATCCTGGACTTGTACAAGCATCCTGACAACATCGATGTCTGGCTGGGAGGCTTAGCTGAAAACTTCCTCCCCAGGGCTCGGACAGGGCCCTTGTTTGCCTGTCTCATCGGGAAGCAGATGAAGGCTCTGCGGGATGGTGACTGGTAGGTTC----------------------------CTGCACAGAGGCGGGTGGTTTgcattggttct----gaagccagccagacctgcattcaaattccggctcca i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1488568 404 + 108979918 GCGAGATGGGCTCAACGAAGGTT--CAGGTCTCTGAGAGAAACCGTGCA---GCCTCTCCCCTGTGCAGGTTACAATGAGTGGAGGGAGTTCTGTGGCCTGCCTCGCCTGGAGACCCCCGCTGACCTGAGCACAGCCATCGCCAGCAGGAGCGTGGCCGACAAGATCCTGGACTTGTACAAGCATCCTGACAACATCGACGTCTGGCTGGGAGGCTTAGCTGAAAACTTCCTCCCCAGGGCTCGGACAGGCCCCCTGTTTGCCTGTCTCATTGGGAAGCAGATGAAGGCTCTGCGGGACGGAGACTGGTAGGTTCCTGT-CCGGAATGT-CTTCCTTCTTGTTCTGCACAGAGGCAGGTGGTCTgcattggttca----gaagccagccagacctgcatccaaattctggctcca i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1460989 404 - 111193037 GCGAGATGGGCTCAACGAAGGTT--CAGGTCTCTGAGAGAAACCGTGCA---GCCTCTCCCCTGTGCAGGTTACAACGAGTGGAGGGAGTTCTGTGGCCTGCCTCGCCTGGAGACCCCCGCTGACCTGAGCACAGCCATCGCCAGCAGGAGCGTGGCCGACAAGATCCTGGACTTGTACAAGCATCCTGACAACATCGACGTCTGGCTGGGAGGCTTAGCTGAAAACTTCCTCCCCAGGGCTCGGACAGGCCCCCTGTTTGCCTGTCTCATTGGGAAGCAGATGAAGGCTCTGCGGGATGGAGACTGGTAGGTTCCTGT-CCGGAATGT-CTTCCTTCTTGTTCTGCACAGAGGCAGGTGGTCTgcattggttca----gaagccagccagacctgcatccaaattctggctcca i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1489382 404 + 3644372 GCGAGATGGGCTCAACGAAGGTT--CAGGTCTCTGAGAGAAACCGTGCA---GCCTCTCCCCTGTGCAGGTTACAACGAGTGGAGGGAGTTCTGTGGCCTGCCTCGCCTGGAGACCCCCGCTGACCTGAGCACAGCCATCGCCAGCAGGAGTGTGGCCGACAAGATCCTGGACTTGTACAAGCATCCTGACAACATCGACGTCTGGCTGGGAGGCTTAGCTGAAAACTTCCTCCCCAGGGCTCGGACAGGCCCCCTGTTTGCCTGTCTCATTGGGAAGCAGATGAAGGCTCTGCGGGACGGAGACTGGTAGGTTCCTGT-CCGGAATGT-CTTCCTTCTTGTTCTGCACAGAGGCAGGTGGTCTgcattggttca----gaagccagccagacctgcatccaaattctggctcca i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1443612 404 - 10304083 GCGAGATGGGCTCAACAAAGGTT--CAGGTCTGTGAGAGAAACCGTGCA---GCCTCTCCCCTGTGCAGGTTACAATGAGTGGAGGGAGTTCTGTGGCCTGCCTCGCCTGGAGACCCCCGCTGACCTGAGCACAGCCATCGCCAGCAGGAGCGTGGCCGACAAGATCCTGGACTTGTACAAGCATCCTGACAACATCGACGTCTGGCTGGGAGGCTTAGCTGAAAACTTCCTCCCCAGGGCTCGGACAGGCCCCCTGTTTGCCTGTCTCATTGGGAAGCAGATGAAGGCTCTGCGGGACGGAGACTGGTAGGTTCCTGT-CCGGAATGT-CTTCCTTCTTCTTCTGCACAGAGGCAGGTGGTCTgcattggttca----gaagccagccagacctgcatccaaattctggctcca i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1523702 404 - 107702431 GCGAGATGGGCTCAACAAAGGTT--CAGGTCTGTGAGAGAAACCGTGCA---GCCTCTCCCCTGTGCAGGTTACAATGAGTGGAGGGAGTTCTGTGGCCTGCCTCGCCTGGAGACCCCCGCTGACCTGAGCACAGCCATCACCAGCAGGAGCGTGGCCGACAAGATCCTGGACTTGTACAAGCATCCTGACAACATCGACGTCTGGCTGGGAGGCTTAGCTGAAAACTTCCTCCCCAGGGCTCGGACAGGCCCCCTGTTTGCCTGTCTCATTGGGAAGCAGATGAAGGCTCTGCGGGACGGAGACTGGTAGGTTCCTGT-CCGGAATGT-CTTCCTTCTTGTTCTGCACAGAGGCAGGTGGTCTgcattggttca----gaagctagccagacctgcatccaaattctggctcca i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1016070 404 - 2200435 GCGAGATGGGCTCAACGAAGGTT--CAGGTCTGTGAGAGAAACCGTGCA---GCCTCTCCCCTGTGCAGGTTACAATGAGTGGAGGGAGTTCTGTGGCCTGCCTCGCCTGGAGACCCCTGCTGACCTGAGCACAGCCATCGCCAGCAGGAGCGTGGCCGACAAGATCCTGGACTTGTACAAGCATCCTGACAACATCGACGTCTGGCTGGGAGGCTTAGCTGAAAACTTCCTCCCCAGGGCTCGGACAGGCCCCCTGTTTGCCTGTCTCATTGGGAAGCAGATGAAGGCTCTGCGGGACGGAGACTGGTAGGTTCCTGT-CCGGAATGT-CTTCCTTCTTGTTCTGCACAGAGGCAGGTGGTCTgcattggttca----gaagccagccagacctgcatccaaattctggctcca i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1446796 404 - 13651311 GCGAGATGGGCTGAACAAAGGTT--CAGGTCTGTGAGAGAAACCATGCA---GCCTCTCCCCTGTGCAGGTTACAATGAGTGGAGGGAGTTCTGTGGCCTGCCTCGCCTGGAGACCCCCGCTGACCTGAGCTCAGCCATCGCCAGCAGGAGCGTGGCTGACAAGATCCTGGACTTGTACAAGCATCCTGACAACATTGACGTCTGGCTGGGAGGCTTAGCTGAAAACTTCCTCCCCAGGGCTCGGACAGGCCCCCTGTTTGCCTGTCTCATTGGGAAGCAGATGAAGGCTCTGCGGGACGGAGACTGGTAGGTTCCTGT-CCGGAACAT-CTTCCTTCTTGTTCTGCATAGAGGCAGGTGGTCTgcattggttct----gaagccagccagacctgcatccaaattctggctcca i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1436329 387 - 108792865 GTGAGGTGGGCTGAACAAAAGTT--CAGGTCTG-GAGAGAAACCCTGTA---GCCTTT-CCCCGTGCAGGTTACAATGCGTGGAGGGCGTTCTGTGGCCTGCCGCGCCTGGAGACCCCCACTGACCTGCACGTGGCCATCGCCAGCAGGAGCGTGGCCGCCAAGATCCTGGAATTGTACAAGCACCCTGACAACATCGATGTGTGGCTGGGAGGCTTAGCTGAAGACTTCCTCCCTGGGGCCCGGACAGGTCCCCTGTTTGCCTGTCTCATTGGGAAGCAGATGAAGGCACTGCGGGATGGTGACTGGTAGGTACC--------------TGTCCTTCACGTTCTACACAGA-G-GGGTGGTCagtgtgggttct-----aggccaaccaggcctgcattcaaatcctggctcCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1265256 401 - 7082604 GTGGGGCGGGCTGAACGAAAGCT--CAGGTCTG-GAGAGAAACCCTGCA---GCCTTTCCCCCGTGCAGGTTACAATGCGTGGAGGGAGTTCTGTGGCCTGCCGCGCCTGGAGACTCCAGCTGACCTGCGCATGGCCATCGCCAGCAGGAGCGTGGCCGCCAAGATCCTGGACTTGTACAAGCATCCTGACAACATCGACGTCTGGCTGGGCGGCTTAGCTGAAAACTTCCTCCCCGGGGCCCGGACAGGTCCCCTGTTTGCCTGTCTCATTGGGAAGCAGATGAAGGCTCTGAGGGACGGTGACTGGTAGGTACCTGA-CCAGAGCTT-TGTCCTCCGCGTTCTACACAGAGG-GGGTGCTCAGTGTGGGTTCT-----AAGCCGGCCAGGCCTGCATTCACATTCTGGCTCCA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1359032 401 + 1864846 GTGGGGCGGGCTGAACAAAGGTT--CAGGTCTG-GAGAGAAACCCTGTA---GCCTTTCCCCCGTGCAGGTTACAATGCGTGGAGGGAGTTCTGTGGCCTGCCGCGCCTGGAGACCCCAGCTGACCTGCACATGGCCATCGCCAGCAGGAGCGTGGCCGCCAAGATCCTGGACTTGTACAAGCATCCTGACAACATCGACGTCTGGCTGGGAGGCTTAGCTGAAAACTTCCTCCCCGGGGCCCGGACAGGCCCCCTGTTTGCCTGTCTCATTGGGAAGCAGATGAAGGCTCTGAGGGACGGTGACTGGTAGGTACCTGA-CCAGAGCTT-TGTCCTCCACGTTCTACACAGAGG-GGGTGGTCagcatgggttct-----aagccagccagacctgcattcaaattctggctcca i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 177672 401 + 287728 GTGAGGCGGGCTGAACGAAGGTT--CAGTTCTG-GAGAGAAACCCTGTA---GCCTTTTCCCTGTGCAGGTTACAATGCGTGGAGGGAGTTCTGTGGCCTGCCACGCCTGGAGACCGCAGCTGACCTGCGCGTGGCCATCGCCAGCAGGAGCGTGGCCGCCAAGATCCTGGGCTTGTACAAGCATCCTGACAACATCGACGTCTGGCTGGGAGGCTTGGCTGAAAACTTCCTCCCCGGGGCCCGGACAGGCCCCCTGTTTGCCTGTCTCATTGGGAAGCAGATGAAGGCGCTGAGGGATGGTGACTGGTAGGTACCTGT-CCAGAGCTT-TGTCCTTCACGTTCTACACAGAGT-GGGTGGTCagtgtgggttct-----aagccagccaggcctgcattcaaattctggctcca i aotNan1.NW_018513311v1 C 0 I 427 s otoGar3.GL873658 956199 352 + 5252280 ATGAGGTGGGCTGACCA-------------------------------------CCCTTCCCGGTGCAGGTTACAACGCCTGGCGGCAGTTCTGCAACCTGCCCCGCCTGGAGACACCTGCCCACCTGCACACAGCCATGGCTAACAGGAGCGTGGCCGAGAGAATAATGCGCTTATACCAGCATCTGGACAATGTGGACGTCTGGCTGGGGGGCTTGGCTGAGGACTTGCTCCCGGGGGCCCGCACTGGCCCCCTGTTTGCCTGCATCATCGGGAGGCAGATGAAGGCCCTGAGGGACGGGGACAGGTGGGTCCC-------GGGTAT-GTGTCTTCATCTTCTGTGCAGGGCTGGGGAGGCCACACTGATTTT----------ACTCAGAGC--------AGTTCTGGGCCCA i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90033943 389 - 120129022 ATG-GGTAGACTAGTCAAGCTTA--AATCCCTGTAAAGTCAGACCTATG---CTCTCTTTCTTGTACAGACTACAATGAATGGAGAGAGTTCTGTGGCTTGTCACGCCTGGAGACACCAGCTGAGCTGAACAAGGCCATTGCCAACAGAAGCATGGTCAACAAGATAATGGACTTATACAAGCATGCTGACAACATTGACGTCTGGTTGGGAGGCTTGGCTGAAAAGTTCTTGCCGGGGGCCCGCACTGGTCCTCTGTTTGCATGTATCATTGGGAAGCAGATGAAGGCTCTGAGGGATGGGGACAGGTCAGTACCTGTGGCAAAGTATATGTGGTATGCACTCTGGGCATAACACAGGGCTCCATATT--------------------AGACTTGTATGGAAAAGTAAGGTCTG i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1784140 410 + 4416731 ATGAGGTAAACTGAATAAATATTGCTATCGCTGTAGAAGAAAAGCTTAAAACACCTCTTCCTTTTGTAGGTTATAATGAATGGAGAGAATTCTGTGGCTTACCAAGACTGGGGACACAAGCTGACTTGGACACTGCCATCGCCAACAGGAGTGTCAGTGAAAAGATAATGAACTTATACAAGCATCCTGATAATATTGATGTCTGGCTGGGTGGTTTAGCTGAAGACTTCCTTCCCAGGGCTCGAACAGGTCCCCTGTTTGCATGTATCATCGGAAAACAAATGAAGGCCCTGAGGGAAGGTGACCGGTAGGTATTTGC-C---ATCAG-TTCCTTCTATATTCTATATGAAAGATAATATTCCATATTGGTTTTAtttgaagtaagcccagtctgggttcaaatactggtgcca i dasNov3.JH576208 I 86 C 0 a score=105904.000000 s hg38.chr2_KI270774v1_alt 176512 23 + 223625 ccattcaact-cttacgtaagcct s panTro5.chr2A 1473171 23 + 111504155 ccattcaact-cttaagtaagcct i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1412364 23 + 114371477 ccattcaact-cttaagtaagcct i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1436308 23 + 1464242 ccattcaact-cttacgtaagcct i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1161171 23 + 81552678 ccgttcaact-cttacgtaagcct i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1488972 22 + 108979918 ccgctcgact-cttacataag-ct i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1461393 22 - 111193037 ccgctcgact-cttacataag-ct i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1489786 22 + 3644372 ctgctggact-cttacataag-ct i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1444016 22 - 10304083 ccgctCGACT-CTTACATAAG-CT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1524106 22 - 107702431 ccgctcgact-cttacgtaag-ct i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1016474 22 - 2200435 ccgctcgact-cttacataag-ct i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1447200 22 - 13651311 ccgctcgact-cttacgtaag-ct i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1436716 23 - 108792865 TAGCTCAGCT-CTTAGAGAGCCTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1265657 23 - 7082604 TAGCTCAGCT-CTTAGGGAGCCCT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1359433 23 + 1864846 cagctcagct-cgcagggagcctt i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 956551 15 + 5252280 --------AC-ATTAGGTGACCCT i otoGar3.GL873658 C 0 I 146 s mm10.chr12 90034332 23 - 120129022 -GGCTCAAGTGCTTAAGTGACCCT i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1784550 23 + 4416731 tcaccctatg-tgtatctaactgt i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 178073 427 + 287728 I a score=191903.000000 s hg38.chr2_KI270774v1_alt 176535 25 + 223625 g--------------------gtcaggttgtttctcccacccaca s panTro5.chr2A 1473194 25 + 111504155 g--------------------gtcaggttgtttctcccacccaca i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1412387 25 + 114371477 g--------------------gtcaggttgtttctcccacccaca i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1436331 25 + 1464242 g--------------------gtcaggttgtttctcccacccaca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1161194 25 + 81552678 g--------------------gtcaggttgtttctcccacccaca i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1488994 25 + 108979918 g--------------------atcagattgtttctcccacccata i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1461415 25 - 111193037 g--------------------atcagattgtttctcccacccata i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1489808 25 + 3644372 g--------------------atcagattgtttctcccacccata i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1444038 25 - 10304083 G--------------------ATCAGATTGTTTCTCCCACCTATA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1524128 25 - 107702431 g--------------------atcagattgtttctcccacccata i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1016496 25 - 2200435 g--------------------atcagattgtttctcccacccata i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1447222 25 - 13651311 g--------------------atcagattgtttctcccacccata i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1436739 25 - 108792865 G--------------------CTCCAGTTGCTCCTCCCACCCATG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1265680 45 - 7082604 GCTCAGGCTGTTCCTCCCACCCTCAGGCTGCTCCTCCCACCCACA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1359456 25 + 1864846 g--------------------ctcaggttgctcctctcaccctca i cebCap1.NW_016107827v1 C 0 I 30 s mm10.chr12 90034355 23 - 120129022 G--------------------AACAGGTTTTCTCTCAAATGTT-- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1784573 25 + 4416731 a--------------------ggcaacttatttctctctaccatg i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 178073 427 + 287728 I e otoGar3.GL873658 956566 146 + 5252280 I a score=65144.000000 s hg38.chr2_KI270774v1_alt 176560 12 + 223625 gcttctttaacc s panTro5.chr2A 1473219 12 + 111504155 gtttccttaacc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1412412 12 + 114371477 gtttccttaacc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1436356 12 + 1464242 gtttccttaacc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1161219 12 + 81552678 gcttccttaACC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1489019 12 + 108979918 gtttccttaACC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1461440 12 - 111193037 gtttccttaACC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1489833 12 + 3644372 gtttccttaACC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1444063 12 - 10304083 GTTTCCTTAACC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1524153 12 - 107702431 gtttccttaACC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1016521 12 - 2200435 gtttccttaACC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1447247 12 - 13651311 gtttccttaACC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1436764 10 - 108792865 GCTTCCAATG-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1265725 10 - 7082604 GCTTCCAGTG-- i saiBol1.JH378218 C 0 C 0 s mm10.chr12 90034378 12 - 120129022 TCATCCTTGATG i mm10.chr12 C 0 I 1 s dasNov3.JH576208 1784598 11 + 4416731 atttcctcaac- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 178073 427 + 287728 I e cebCap1.NW_016107827v1 1359481 30 + 1864846 I e otoGar3.GL873658 956566 146 + 5252280 I a score=997217.000000 s hg38.chr2_KI270774v1_alt 176572 144 + 223625 tagaacagtgtttttataacaatgaagcaactacGAAGCACGTAGC-----------ACTTAGAATGG-GAGCTAGCACTG-ATTTTTCC-TA-GATCCAACCACACGAGCAAGCAGGC--ACCTAACTA-AACAAATTGTGACACAA----TCGTGACAGCCCGG s panTro5.chr2A 1473231 144 + 111504155 tagaacagtgtttttataacaatgaagcaactacGAAGCACGTAGC-----------ACTTAGAATGG-GAGCTAGCGCTG-ATTTTTCC-TA-GATCCAACCACACGAGCAAGCAGGC--ACCTAACTA-AAAAAATTGTGACACAA----TCGTGACAGCCCGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1412424 144 + 114371477 tagaacagtgtttttataacaatgaagcaactacGAAGCACGTAGC-----------ACTTAGAATGG-GAGCTAGCGCTG-ATTTTTCC-TA-GATCCAACCACACGAGCAAGCAGGC--ACCTAACTA-AAAAAATTGTGACACAA----TCGTGACAGCCCGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1436368 142 + 1464242 tagaacagtgtttttataacaatgaagcaactacGAAGCACATAGC------------CCTAGAATGG-GAGCTAGCACTG-ATTTTTCC-TA-GATCCAACCACACGAGCAAGCAGGC--ACC-AACTA-AAAAAATTGTGACACAA----TCGTGACAGCCCGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1161231 136 + 81552678 TAGAACAGTGTTTTTATAAC----GAGCAACTACAAAGCACATAGC-----------ACTTAGAATGG-GAGCTAGCGCTG-ATTTTTCC-TA-GATCCAACCACACGAGCAAGCAGGC--ACATAAC----ACAAATTG-GACACAC----TCATGACAGCCCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1489031 145 + 108979918 TCGAACCGTGTTTTCATAACAATGAAGCAACTACAAAGCATGTAGC-----------ACTTAGAATGG-GAGCTAGCACTG-ATTTTTCC-TA-GATCCAACCACATGAGCAAACAGGC--GCCTAACAAAAACAAATTGTGACACAC----TCGTGACAGCCCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1461452 145 - 111193037 TCGAACCGTGTTTTCATAACAATGAAGCAACTACAAAGCATGTAGC-----------ACTTAGAATGG-GAGCTAGCACTG-ATTTTTCC-TA-GATCCAACCACATGAGCAAACAGGC--GCCTAACAAAAACAAATTGTGACACAC----TCGTGACAGCCCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1489845 141 + 3644372 TCGAACCGTGTTTTCATAACAATGAAGCAACTACAAAGCATGTAGC-----------ACTTAGAATGG-GAGCTAGCACTG-ATTTTTCC-TA-GATCCAACCACATGAGCAAACAGGC--GCCTAACAA----AAATTGTGACACAC----TCGTGACAGCCCTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1444075 145 - 10304083 TAGAACTGTGTTTTTATAACAATGAAGCAACTACAAAGCACGTAGC-----------ATTTAGAATGG-GAGCTAGCACTG-ATTTTTCC-TA-GATCCAACCACATGAGCAAACAGGC--GCCTAACAAAAACAAATTGTGACACAC----TCATGACAGCCCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1524165 145 - 107702431 TCGAACCGTGTTTTCATAACAGTGACGCAACTACAAAGCATGTAGC-----------ACTTAGAATGG-GAGCTAGCACTG-ATTCTTCC-TA-GATCCAACCACATGAGCAAACAGGC--GCCTAACAGAAACAAATTGTGACACAC----TCATGACAGCCCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1016533 145 - 2200435 TAGAACTGTGTTTTCATAACAATGAAGCAACTACAAAGCACGTAGC-----------ATTTAGAATGG-GAGCTAGCACTG-ATTTTTCC-TA-GATCCAACCACATGAGCAAACAGGC--GCCTAACAAAAACAAATTGTGACACAC----TCATGACAGCCCTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1447259 143 - 13651311 TAGAACTGTGTTTTTATAACAATGAAGCAACTACAAAGCACGTAGC-----------ATTTAGAATGG-GAGCTAGCACTG-ATTTTTCC-TA-GATCCAACCACATGAGCAAAC--GC--ACCTAACAAAAACAAATTGTGACACAC----TCATGACAGCCCTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1436774 154 - 108792865 CAGGACAGTGTTGTTATAGAAATGAAGCAATTACGAAGCTCGCAGCCTGTGCTGAGCACCGAGAATGA-GAGACGGTGCTG-ATTTTTCCACG-CATCCACCCACA-GAGCAAGCAGGC--GCCT-ACAGAAACAGATTGTGACACAT----TGGTGATGGCCT-G i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1265735 155 - 7082604 CAGGACAGTGTTGTTATAAAAATGAAGCAACTACGAAGCACACAGCCTGTGCTGAGCCCTGAGAACGA-GAGAAAGTGCTG-ATTTTCCCATA-CACCCACCCACA-GAGCAAGCAGGT--GCCTGACAGAAACAGACTGTGACACCT----CGGTGACGGCCC-G i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1359511 149 + 1864846 CAGGACAGTGTTGTTATAAAAATGAAGCAACTATGAAGCACACAGCCTGTGCTGAGCACTGAGAATGA-GAGAGAGTGCTG-ATTTTTCCACA-CATCCACCCACA-GAGCAAGCAGGT--GCCT------AACAGATTGTGACACAT----TGGTGACGGCCT-G i cebCap1.NW_016107827v1 I 30 C 0 s mm10.chr12 90034391 137 - 120129022 TAAAACGAAGTTGTCACCACACAAAAG-GACCACAAGACATAAAGAATATCTTGTTCACTTAAAA----ACATGACCATTG-TTTTCCCA-TA-TTTCTAGTCATAAGGTTGAAAAGGC--ATATAACTC----AAATTGTGACAACC----T----AC------- i mm10.chr12 I 1 C 0 s dasNov3.JH576208 1784609 165 + 4416731 tataagaggactgagatgaaaatGAAATAAGTGCAAAGTGTACAGCATAGTCTGAGCATGTAAAAGGGCCAACTACTATTGTATTTTTCG-TATCATCTAATCACATGAATGAATAAGCTGGCGTCACGGGAACATCATGTGTTCCCTGATGTCATGATCGCTCTG i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 178073 427 + 287728 I e otoGar3.GL873658 956566 146 + 5252280 I a score=414892.000000 s hg38.chr2_KI270774v1_alt 176716 57 + 223625 AGACTGCATC-----CCATC------CCTC-ACGTCCCATGACAATGCCCGGGAAAGC------GCAGAGGTGG-A s panTro5.chr2A 1473375 57 + 111504155 AGACTGCATC-----CCATC------CCCC-ACGTCCCCTGACAATGCCCGGGAAAGC------GCAGAGGTGG-A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1412568 57 + 114371477 AGACTGCATC-----CCATC------CCCC-ACGTCCCCTGACAATGCCCGGGAAAGC------GCAGAGGTGG-A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1436510 56 + 1464242 AGACTGCATC-----CCATC------CC-C-ACATCCCCTGACAATGCCCGGGAAAGT------GCAGAGGTGG-A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1161367 57 + 81552678 AGACTGCATT-----CCATC------CCCC-ACATCCCCTGACAACGCCCGGGAAAGC------ACAGAGGTGG-A i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1489176 57 + 108979918 AGACTGCATC-----CCATC------CCCC-ACGTCCCCTGACGATGCCCAGGAAAGC------GCAGAGGTGG-A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1461597 57 - 111193037 AGACTGCATC-----CCATC------CCCC-ACGTCCCCTGACGATGCCCAGGAAAGC------GCAGAGGTGG-A i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1489986 57 + 3644372 AGACTGCATC-----CCATC------CCCC-ACGTCCCCTGACGATGCCCAGGAAAGC------GCAGAGGTGG-A i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1444220 57 - 10304083 AGACTGCATC-----CCATC------CCCC-ACATCCCCGGACAATGCCCAGGAAAGC------ACAGAGGTGG-A i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1524310 57 - 107702431 AGACTGCATC-----CCATC------CCCC-ACGTCCCCTGACGATGCCCGGGAAAGC------ACAGAGGTGG-A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1016678 57 - 2200435 AGACTGCATC-----CCATC------CCCC-ACGTCCCCTGACAATGCCCAGGAAAGC------GCAGAGGTGG-A i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1447402 57 - 13651311 TGACTGCATC-----CCATC------CCCC-ACGTGCCCTGACGATGCCCAGGAAAGC------GCAGAGGTGC-A i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1436928 47 - 108792865 CAGCTGCATC-----CCAC----------------CCCCTGACAATGTCTGGGGAAGC------GCAGAGATGG-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1265890 56 - 7082604 CGGCTGCATC-----CCAC-------CCCC-ACGTCCCCTGACAATGTCTGGGGAAGC------ACAGAGGTGGC- i saiBol1.JH378218 C 0 I 7 s cebCap1.NW_016107827v1 1359660 56 + 1864846 CGGCTGCATC-----CCATC------CCCC-ACATCCCCTGACAATGTCTGGGGAAGC------GCAGAGGTGG-- i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 956712 45 + 5252280 AAGCCACATC-----CAGTC------CATC--CATCCTCAG--GATGCCTCAGTGAGT------GC---------- i otoGar3.GL873658 I 146 C 0 s mm10.chr12 90034528 72 - 120129022 AGCTTCCATCTTTGACCATTCACTGACACC-ACGCATACTG--AATGGATGGGCCTGCCTTGGTGCCCGTGTGG-A i mm10.chr12 C 0 I 7 s dasNov3.JH576208 1784774 57 + 4416731 AGACTGTATT-----CCATC------TTTAGATGTTCTCTGACAAC-CCCTGGTGGAC------TTAGACGTCG-G i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 178073 427 + 287728 I a score=349107.000000 s hg38.chr2_KI270774v1_alt 176773 37 + 223625 CAGTGACTCAGGCGCAGACACA-GGCCATGCCCGGTGC s panTro5.chr2A 1473432 37 + 111504155 CAGTGACTCAGGTGCAGACACA-GGCCATGCCCAGTGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1412625 37 + 114371477 CAGTGACTCAGGTGCAGACACA-GGCCATGCCCAGTGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1436566 37 + 1464242 CAGTGACTCAGGTGCAGACACA-GGCCATGCCCAGTGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1161424 37 + 81552678 CAGTGGCTCAGGCGCATACACA-GGCCATGCCCGGCGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1489233 37 + 108979918 CAGTGACTCAGGCGCAGACACA-GGCTATGCCTGGTGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1461654 37 - 111193037 CAGTGACTCAGGCGCAGACACA-GGCTATGCCTGGTGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1490043 37 + 3644372 CAGTGACTCAGGTGTAGACACA-GGCTATGCCTGGTGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1444277 37 - 10304083 CAGTGACTCGGGTGCAGACACA-GGCTATGCCTGGTGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1524367 37 - 107702431 CAGTGACTCAGGCGCAGACACA-GGCTCTGCCTGGTGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1016735 37 - 2200435 CAGTGACTCAGGCGCAGACACA-GGCTATGCCTGGTGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1447459 37 - 13651311 CAGTGACTCAGGCGCAGACACA-GGCTATGCCTGGTGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1436975 37 - 108792865 CAGTGACTCAGGTGCAGACACA-GGTGGTGCCCAGGGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1265953 37 - 7082604 CAGTGACTCAGGCGCAGATGCA-GGTGGTGCCCAGGGC i saiBol1.JH378218 I 7 C 0 s cebCap1.NW_016107827v1 1359716 37 + 1864846 CAGCGACTCAGGTGCAGACACA-GGTGGTGCCCAGGGC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 178500 37 + 287728 CAGTGACTCAGGCGCAGACACA-GGTGGTGCCCAGGGC i aotNan1.NW_018513311v1 I 427 C 0 s otoGar3.GL873658 956757 35 + 5252280 ---TGACCCAGGCACTGAGGGGTGGCTGTGACCTGCGC i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90034607 33 - 120129022 TAGTG-CCCTGGAGCAGTCTCC-AGCCAAAC---AGAC i mm10.chr12 I 7 C 0 s dasNov3.JH576208 1784831 28 + 4416731 ----TACTAAGG-----AAAAA-GGCCAACCACTATGC i dasNov3.JH576208 C 0 I 93 a score=428239.000000 s hg38.chr2_KI270774v1_alt 176810 68 + 223625 TCATGGATGCCTCTAGGCTGGACAGGACTTCCCGGCC---CCCCAGACCCCACCTACAGATAGCAGATGGT s panTro5.chr2A 1473469 68 + 111504155 TCATGGATGCCTCTGGGCTTGACAGGACTTCCCAGCC---CCCCAGCCCCTTCCTACAGATAGCAGATGGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1412662 68 + 114371477 TCATGGATGCCTCTGGGCTTGACAGGACTTCCCAGCC---CCCCAGCCCCTTCCTACAGATAGCAGATGGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1436603 68 + 1464242 TCATGGATGCCTCTGGGCTTGACAGGACTTCCCAGCC---CCCCAGCCCCTGCCTACAGATAGCAGATGGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1161461 68 + 81552678 TCATGGATGCCTCTGGGCTGGACAGGCCTTCCCCGCG---CCCCAGCCCCCGCCTGCAGATAGCAGACGCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1489270 66 + 108979918 TCATGGATGCCTCTGGGCTGGACAGGCC-TCCCGGTC---CCCCAGCCCCTGCCTGCACACAG-AGGTGCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1461691 66 - 111193037 TCATGGATGCCTCTGGGCTGGACAGGCC-TCCCGGTC---CCCCAGCCCCTGCCTGCACACAG-AGGTGCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1490080 66 + 3644372 TCATGGATGCCTCTGGGCTGGACAGGCC-TCCCGGTC---CCCCAGCCCCTGCCTGCACACAG-AGGTGCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1444314 67 - 10304083 TCATGGATGCCTCTGGGCTGGACAGGCCTTCTCAGCC---CCCCAGTCCCTGCCTGCACACAG-AGGTGCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1524404 67 - 107702431 TCATGGATGCCTCTGGGCTGGACAGGCCTTCCCGGTC---CCCCAGCCCCTGCCTGCACACAG-AGGTGTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1016772 67 - 2200435 TCATGGATGCCTCTGGGCTGGACAAGCCTTCCCGGTC---CGCCAGCCCCTGCCTGCACACAG-AGGTGCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1447496 67 - 13651311 TCATGGATGCCTCTGGGCTGGACAGGCCTTCCTGGCC---CCCCAGCCCCTGCCTGCACACAG-AGGTGCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1437012 49 - 108792865 TCATAGATGCCCCTGGGCTGGACAGCCCTTCCTGCCCCCACCCCCGCCC---------------------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1265990 70 - 7082604 TCATAGATGTCCCTGGGCTGGACAGCCCTTCCTGTCCCCACCGCTGCCCCCACCCACACACAG-CAGTGCT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1359753 70 + 1864846 TCATAGATGCCCCTGGGCTGGACAGAACTTCCTGTCCCCACCGCCGCCCACACCCACACACAG-CAGTGCT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 178537 64 + 287728 TCATAGATGCCCCTGGGCTGGACAGCCCTTCCTGCCCCCACCCCCACCC------ACACACAG-CAGCGCC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 956792 38 + 5252280 C--TGGGAGCTGC-ATGCTGGACAGGCC--CCTGGCC---------------------------AGATGC- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90034640 50 - 120129022 TCATTCCTGCTTCT--------CTACCATGCCTCGAC---CTCCATCCCCTCAC----------AGTTGCC i mm10.chr12 C 0 C 0 e dasNov3.JH576208 1784859 93 + 4416731 I a score=2240789.000000 s hg38.chr2_KI270774v1_alt 176878 267 + 223625 TGCCGGTAGCAGAAAGCTGAGGT--CCCGCTTTGCCTGCCTCAT-------------GCATGTCTGCTCCCTCCTCAAGTTCAACCTAGAATTTGGAGGTTTGT---ACTGGAGGGAGTCAG---AGGCAGATCCTGTTCCCATCTGACTCTGAGTGCATGCCC---CCCGTAGA------AGCAG-GTGCGCAGGATACCAGTGTTAGGATTTTGGAACAACACAGACAAAAGCAATAGGAAAATGTTTTCTTTTG----CTTTTAA--ATAC-ATCCCTACCTATCCAATTCTCTCTCT---ATTT s panTro5.chr2A 1473537 252 + 111504155 TGCCGGTAGCAGAAAGGTGAGGT--CCCGCTTTGCCTGCC----------------------------CCCTCCTCAAGTTCAACCTAGAATTTGGAGGTTTGT---ACTGGAGGGAGTCAG---AGGCAGATCCTGTTCCCGTCTGACTCTGAGTGCATGCCC---CCTGTAGA------AGCAG-GTGCACAGGATACCAGTGTTAGGATTTTGGAACAACACAGACAAAAGCAATAGGAAAATGTTTTCTTTTC----CTTTTAA--ACAC-ATCCCTACCTATCCAATTCTCTCTCT---ATTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1412730 267 + 114371477 TGCCGGTAGCAGAAAGGTGAGGT--CCCGCTTTGCCTGCCTCAT-------------GCATGTCTGCTCCCTCCTCAAGTTCAACCTAGAATTTGGAGGTTTGT---ACTGGAGGGAGTCAG---AGGCAGATCCTGTTCCCGTCTGACTCTGAGTGCATGCCC---CCTGTAGA------AGCAG-GTGCACAGGATACCAGTGTTAGGATTTTGGAACAACACAGACAAAAGCAATAGGAAAATGTTTTCTTTTC----CTTTTAA--ACAC-ATCCCTACCTATCCAATTCTCTCTCT---ATTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1436671 265 + 1464242 TGCCGGTAGCAGAAAGCAGAGGT--CCCGCTTTGCCTGCCTCAT-------------GCATGTCTGCTCCCTCCTCAAGTTCAACCTAGAATTTGGAGGTTTGT---ACTGGAGGGAGTCAG---AGGCAGATCCTGTTCCCGTCTGAC-CTGAGTCCATGCCC---CCCGTAGA------AGCAG-GTGCACAGGATACCAGTGTT-GGATTTTGGAACAACACAGACAAAAGCAATAGGAAAATGTTTTCTTTTG----CTTTTAA--AGAC-ATCCCTACCTATCCAATTCTCTCTCT---ATTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1161529 265 + 81552678 TGCCGGTAGCAGAAAGCCGAGGT--CCCGCTTTGCCTGCCTGGT-------------ACATGTCTGCTCCCTCCACAAGTTCAACCTAGAATTTGGAGGTTTGT---ACTGGAGGGAGTCAG---AGCCAGATCCTGTTCCCATCTGA--CTGAGTCCATGCCC---CCTGTAGA------AGCAG-GTACACAGGATACCAGTGTTAGGATTTCAGAACAACACAGACAAAAACAATGGGAAAATGTTTTCTTTTG----CTTTTAA--AGAC-ATCCCTACCTATCCAATTCTCTCTCT---ATTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1489336 270 + 108979918 TGCCGGTAGCAGAAAGCTGAGGT--CCCGGTTTGCCTGCCTCGT-------------ACATGTCTGCTCCCTCCTCAAGTTCAACCTGGAATGTGGAGGTTTGT---ACTGGAGGGAGTCAG---AGCCAGATCCTGTTCCCGTCTGATTCTGAGTCCTTCCCCACTCCCGTAGA------AGCAG-GTGCACAGGATACCAGTGTTAAGATTTTGGAACAACACAGACAAAAACAATGGGAAAACGTTTTCTTTTG----CTTTTAA--AGAC-ATCCCTACCTATCCAGCTCTCTCTCT---ATTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1461757 270 - 111193037 TGCCGGTAGCAGAAAGCTGAGGT--CCCGGTTTGCCTGCCTCGT-------------ACATGTCTGCTCCCTCCTCAAGTTCAACCTGGAATGTGGAGGTTTGT---ACTGGAGGGAGTCAG---AGCCAGATCCTGTTCCCGTCTGATTCTGAGTCCTTCCCCACTCCTGTAGA------AGCAG-GTGCACAGGATACCAGTGTTAAGATTTTGGAACAACACAGACAAAAACAATGGGAAAACGTTTTCTTTTG----CTTTTAA--AGAC-ATCCCTACCTATCCAGCTCTCTCTCT---CTTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1490146 270 + 3644372 TGCCGGTAGCAGAAAGCTGAGGT--CCCGGTTTGCCTGCCTCGT-------------ACATGTCTGCTCCCTCCTCAAGTTCAACCTGGAATGTGGAGGTTTGT---ACTGGAGGGAGTCAG---AGCCAGATCCTGTTCCCGTCTGATTCTGAGTCCTTCCCCACTCCCGTAGA------AGCAG-GTGCACAGGATACCAGTGTTAAGATTTTGGAACAGCACAGACAAAAACAATGGGAAAACGTTTTCTTTTG----CTTTTAA--AGAC-ATCCCTACCTATCCAGCTCTCTCTCT---ATTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1444381 266 - 10304083 TGCAGGTAGCAGAAAGCTGAGGT--CCCGCTTTGCCTGCCTCAT-------------ACGTGTCTGCTCCCTCCTCAAGTTCAACCTGGAATGTGGAGGTTTGT---ACTGGAGGGAGTCAG---AGCCAGATCCTGTTCCCGTCTGATTCTGAGTCCTTCCCCACTCCCGTAGA------AGCAG-GTGCACAGGATACCAGTGTTAAGATCCTGGAACAACACAGACAAAAACAATGGGAAAACGTTTTCTTTTG----CTTTTAA--AGAC-ATCCCTACCTATCCAG----TTCTCT---ATTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1524471 270 - 107702431 TGCCGGTAGCAGAAAGCTGAGGT--CCCACTTTGCCTGCCTCGT-------------ACATGTCTGCTCCCTCCTCAAGTTCAACCTGGAATGTGGAGGTTTGT---ACTGGAGGGAGTTAG---AGCCAGATCCTGTTCCCGTCTGATTCTGAGTCCTTCCCCACTCCCGTAGA------AGCAG-GTGCACAGGATACCAGTGTTAAGATTTTGGAACAACACAGACAAAAACAATGGGAAAATGTTTTCTTTTG----CTTTTAA--AGAC-ATCCCTACCTATCCAGTTCTCTCTCT---ATTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1016839 270 - 2200435 TGCCGGTAGCAGAAAGCTGAGGT--CCCGGTTTGCCTGCCTCGT-------------ACATGTCTGCTCCCTCCTCAAGTTCAACCTGGAATGTGGAGGTTTGT---ACTGGAGGGAGTCAG---AGCCAGATCCTGTTCCCGTCTGACTCTGAGTCCTTCCCCACTCCCGTAGA------AGCAG-GTGCACAGGATACCAGTGTTAAGATTTTGGAACAACACAGACAAAAACAATGGGAAAACGTTTTCTTTTG----CTTTTAA--AGAC-ATCCCTACCTATCCAGTTCTCTCTCT---ATTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1447563 263 - 13651311 TGCCGGTGGCAGAAAGCTGAGGT--CCTGCTTTGCCTGCCTCGT-------------ACATGTCTGCTCTCTCCTCAAGTTCAACCTGGAATGTGGAGGTTTGT---ACTGGAGGGAGTCAG---AGCCAGATCCCGTTCCCGTCTGA--CTGAGTCCATGAC----CCCATAGA------AGCAG-GTGCACAGGATACCAGTGTTAGGATTTTGGAACAACACAGACAAAAACAATTGG-AAATGTTTTCTTTTG----CTTTTAA--AGAC-ATCCCTACCTATCCAGTTCTCTTTCT---ATTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1437061 257 - 108792865 -----AGAGCAGAAAGCTGAGAT--CTGGCTAT-CCAGCCTCGC-------------ACCTGTCTGTTCCTTCCTAAGGTTCAACCCAGAATTTGGGGGTTTGT---CCCAGAGAGGGTCAG---AGCCAGGTCCTGTTTCTGTCTGACACGGAGTCTGTACC----CCCACAGA------AGCAG-GTGCACAGGATGTCAGCAGTAAGATTTTGGAATAACACACAGAAAAACAGTGGGAAAACG-TTTCTTTTG----CTGTTAA--AAAC-ATCCCCAGCTATCCAG--CTCTCTCT---GTTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1266060 263 - 7082604 TGCCAGGAGCAGAAAGCTGAGAT--CCCGCTAC-CCGGCCTTGC-------------ACCTGTCTGTTCCTTCCTAAGGTTCAACCCAGAATTTGAGGGTTTAT---CCCAGAGGCGGTCAG---AGCCAGGTCCTGTTTCTGTCTGACACGGAGTCCGTACC----CCCATAGA------AGCAG-GTGCACAGGATGTCAGCAGTAAGGTTTTGGAATAACACAGACAAAAACAGTGGGAAAACATTTTCTTTTG----CTGTTAA--AAGC-ACCCCCAGCTATCCAG--CTCGCTCT---GTTT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1359823 261 + 1864846 TGCCAGGAGCAGAAAGCTGAGAC--CCCGCTAC-CCGGCCTTGG-------------ACATGTCTGTTCCATCCTAAGGTGCAACCCAGAATTTGGGGGTTTGT---CCCAGAGGCAGCCAG---AGCCAGGTCCTGTTTCTGTCTGACACGGAGTCCGTACC----CCCATAGA------AGCAG-GTGCACAGGGTGTCAGCAGTAAGATTTTGGAATAACACAGACAAAAGCAGTGGGAAAACGTTTTCTTTTG----CTGTTAA--AAGC-ATCCCCCACTCTCCAA--CTCG--CT---GTTT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 178601 260 + 287728 TGCCGGGAGCAGAAAGCTGAGAT--CCCGCTAC-CCCGCCTTGC-------------ACCTGTCTGTTCCTTCCTAAGGTTTAACCCAGAATTTGGGGGCTTG----CCCAGAGGGGGTCAG---AGCCAGGTCCTGTTTCTGTCTGACACGGAGTCCGTACC----CCCATCGA------AGCAG-GTGCACAGGATGTCAGCAGTAAGATTTTGGAATA--ACAGACAAAAACAGTGGGAAAACGTTTTCTCTTG----CTGTTAA--AAAC-ATCCCCAGCTATCCAG--CTCCCTCT---GCTT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 956830 157 + 5252280 ------------------------------------------------------------TGCCTGCCCCCTCTC----------------------GGTTT-------------------------CTAACTCTGGTCTCCACCTGCC------------------CTGGCAGA------AGCTG-AT-CGTGTGGT----GAGGCAGAGTCTGGGGACCACACAGACAAAAACAGTA-GAAAATGTTTTCTTGT--------TTAA--TA---ATCCCTACATATCCAGTTCTCTCTCTCCCACTT i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90034690 249 - 120129022 TGTC---------------------cttgcacttcctccttc------------------------ctccttcctccaattcaacctaaaattctgtacttcctgcacccagaggaggttagggaagcagaGTCATTTATCAGTGTGCCCCATGGT--ATGAC----ACCATAGAGTGACCAGCAGAGTGTAAACCATG-AACCATTACAATTATGGAACCACACATTAAAAACCAA---GGAATCATTTCTTTCTGGTATCTTTTAAGTAAGC-AACtctatctatctatctatctatct---atct i mm10.chr12 C 0 I 135 s dasNov3.JH576208 1784952 239 + 4416731 TGCAGGTAGCAGAAAGCTGGAGTGCCCAGCTCTTTCCTCCACATATTTTGTCCTGACACATTGTTGCTCCCTCCTCAACTTCAATCTAAAGGTTTTAAATTTTT---TCCA-------CTAA---ATTTAAATCA---------CTAATCTCTAG---ATGTC----TCAGTAGA------AACTA-ATACA---AATGGCAAATTGGTGATTTTGGAACCACACAGACAAAA-CAATGGAA-------------------TTTTAAA--AAATAATACCTATATAACCATTTCTCTTTT-------- i dasNov3.JH576208 I 93 C 0 a score=3701137.000000 s hg38.chr2_KI270774v1_alt 177145 408 + 223625 T---TGGTAGTCACTGTG-------------CCGAGGTCAGATTTTTGTTGTAAAGGATCTGTGTTCTT---CCCAGAG----------AGTGC-------------------ACCTGCCACACGCTGG---------------GGCTCCTGTC-------------CTTT---CCCC---AGTGTGACTTTTA---------------------------------------------------------------TCTCTAATTTCTGAGATGCAGCCTTTCAAAGAGCTACGAACACCTGGGTAGAAATCACCAGGAGAACTT----GTCTCCCTTATAGC--TGTGTCTTCAGCAAAC--GTGCGGTTTGGAATTCTCTGGGACATGGGAAGCCACTCGCTCAGAAGGGGGAAGATTTCACCAGCTTGCCCCATACGTGTGTCTCCCATGCGTGTTTTATGCCACCTGTGGCTGAAGCGCCATCTGAAATCAG--TGCAGAGGCAGCTGGCAGGTTCCTAGGGTGGTGCCCCCAATTTCTCATCCTATGTATTTATGAC s panTro5.chr2A 1473789 408 + 111504155 T---TGGTAGTCACTGTG-------------CCAAGGTCAGATTTTTGTTGTAAAGGATCTGTGTTCTT---CCCAGAG----------AGTGC-------------------ATCTGCCACACGCCGG---------------GGCTCCTGTC-------------CTTT---CCCC---AGTGTGACTTTTA---------------------------------------------------------------TCTCTAATTTCTGAGATGCAGCATTTCAAAGAGCTATGGACACCTGGGGAGAAATCACCAGGAGAACTT----GTCTCCCTCTTAGC--TGTGTCTTCAGCAAAC--GTGTGGTTTGGAATTCTCTGGGACATGGGAAGCCACTTGCTCAGAAGGGGGAAGATTTCACCAGCTTGCCCAATACGTGTGTCTCCCATGCGTGTTTTATGCCACCTGTGGCTGAAGCGCCATCTGAAATCAG--TGCAGAGGCAGCTGGCAGGTTCCTAGGGTGGTGCCCCCAATTTCTCATCCTATGTATTTATGAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1412997 408 + 114371477 T---TGGTAGTCACTGTG-------------CCGAGGTCAGATTTTTGTTGTAAAGGATCTGTGTTCTT---CCCAGAG----------AGTGC-------------------ATCTGCCACACGCCGG---------------GGCTCCTGTC-------------CTTT---CCCC---AGTGTGACTTTTA---------------------------------------------------------------TCTCTAATTTCTGAGATGCAGCATTTCAAAGAGCTATGGACACCTGGGGAGAAATCACCAGGAGAACTT----GTCTCCCTCTTAGC--TGTGTCTTCAGCAAAC--GTGTGGTTTGGAATTCTCTGGGACATGGGAAGCCACTTGCTCAGAAGGGGGAAGATTTCACCAGCTTGCCCCATACGTGTGTCTCCCATGCGTGTTTTATGCCACCTGTGGCTGAAGCGCCATCTGAAATCAG--TGCAGAGGCAGCTGGCAGGTTCCTAGGGTGGTGCCCCCAATTTCTCATCCTATGTATTTATGAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1436936 408 + 1464242 T---TGGTAGTCACTGTG-------------CCGAGGTCAGATTTTTGTTGTAAAGGATCTGTGTTCTT---CCCAGAG----------AGTGC-------------------ACCTGCCACACGCTGG---------------GGCTCCTGTC-------------CTTT---CCCC---AGTGTGACTTTTA---------------------------------------------------------------TCTCTAATTTCTGAGATGCAGCATTTCAAAGAGCTACGAACACCTGGGGAGAAATCACCAGGAGAACTT----GTCTCCCTCATAGC--TGTGTCTTCAGCAAAC--GTGCGGTTTGGAATTCTCTGGGACATGAGAAGCCACTCGCTCAGAAGGGGGAAGATTTCACCAGCTTGCCCCATACGTGTGTCTCCCATGCGTGTTTTATGCCACCTGTGGCTGAAGCGCCATCTGAAATCAG--TGCAGAGGCAGCTGGCAGGTTCCTAGGGTGGTGCCCCCAATTTCTCATCCTATGTATTTATGAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1161794 408 + 81552678 T---TGGTAGTCACTGTG-------------CCGAGGTCAGATTTTTGTTGTAAAGGATCTGTACTCTT---CCCAGAG----------AGTGC-------------------ACCTGCCACATGCCGG---------------GGCTTCTGTC-------------CTTT---CCCC---GGTGTAACTTTTA---------------------------------------------------------------TCTGTAATTTCTGAGATGCAGCATTTCGAAGAGCTACGAACACCTGGGGAGAAATCACCAGGGGAATTT----GTCTCCCTCATAGC--TGTGTCTTCAGCAAAC--GTGCGGTTTGGAATTCTCTGGGACATGGGAAGCCACTAGCTCAGAAGGGGGAAGATTTCGCCAGCTTGCCCCATACGTGTGTCTCCCATGCGTGTTTTATGCCACCCATGGTGGAAGCTCCATCTGAAATCAG--TGCAGAGGCAGCTGGCAGATTCCTAGGGTGGTACCCCCAATTTCTCATCCTATGTATTAATGAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1489606 402 + 108979918 T---TGGTAGTCACTGTG-------------CCAAGGTCAGATTTTTGTTGTAAAGGATCTGTGCTCTT---TCCAGAG----------AGTGC-------------------ACCTGTCACACGCGGA---------------GGCTCCTGTC-------------CTTT---CCCC---AGTGTGACTTTTG---------------------------------------------------------------TCTCTAATTTCGGAGATGCAGCATTTCAAAGAGCTACGAACACCTGGGGAGAAATTACCAGATGAACTT----GTCTCCCTCATAGC--TGTGTCTTCAGTAAAC--GTGC-GTTTGGAATTCTCTGGGACATGGGAAGCCACTCGCTCAGAAGGGGGAAGATTTCACCAACTTGCCCCATATGTGTGTCTCCCAAGCGTGTTTTATGCCACCCATGGCTGAAGCTCCATCTGAAAT-------CAGAGGCAGCTGGCAGATTCCTGGGGTGGTGCCCGCAATTTCTCATCCTGCGTATTTATGAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1462027 402 - 111193037 T---TGGTAGTCACTGTG-------------CCAAGGTCAGATTTTTGTTGTAAAGGATCTGTGCTCTT---TCCAGAG----------AGTGC-------------------ACCTGTCACACGCGGA---------------GGCTCCTGTC-------------CTTT---CCCC---AGTGTGACTTTTG---------------------------------------------------------------TCTCTAATTTCGGAGATGCAGCATTTCAAAGAGCTACGAACACCTGGGGAGAAATTACCAGATGAACTT----GTCTCCCTCATAGC--TGTGTCTTCAGTAAAC--GTGC-GTTTGGAATTCTCTGGGACATGGGAAGCCACTCGCTCAGAAGGGGGAAGATTTCACCAACTTGCCCCATATGTGTGTCTCCCAAGCGTGTTTTATGCCACCCATGGCTGAAGCTCCATCTGAAAT-------CAGAGGCAGCTGGCAGATTCCTGGGGTGGTGCCCGCAATTTCTCATCCTGCGTATTTATGAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1490416 402 + 3644372 T---TGGTAGTCACTGTG-------------CCAAGGTCAGATTTTTGTTGTAAAGGATCTGTGCTCTT---TCCAGAG----------AGTGC-------------------ACCTGTCACACGCGGA---------------GGCTCCTGTC-------------CTTT---CCCC---AGTGTGACTTTTG---------------------------------------------------------------TCTCTAATTTCGGAGATGCAGCATTTCAAAGAGCTACGAACACCTGGGGAGAAATTACCAGATGAACTT----GTCTCCCTCATAGC--TGTGTCTTCAGTAAAC--GTGC-GTTTGGAATTCTCTGGGACATGGGAAGCCACTCGTTCAGAAGGGGGAAGATTTCACCAACTTGCCCCATATGTGTGTCTCCCAAGCGTGTTTTATGCCACCCATGGCTGAAGCTCCATCTGAAAT-------CAGAGGCAGCTGGCAGATTCCTGGGGTGGTGCCCGCAATTTCTCATCCTGCGTATTTATGAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1444647 402 - 10304083 T---TGGTAGTCACTGTG-------------CCAAGGTCAGATTTTTGTTGTAAAGGATCTGTGCTCTT---CCCAGAG----------AGTGC-------------------ACCTGCCACATGCCGA---------------GGCTCCTGTC-------------CTTT---CCCC---AGTGTGACTTTTG---------------------------------------------------------------TCTCTAATTTCTGAGATGCAGCATTTCAAAGAGCTACGAACATCTAGGGAGAAATCACTGGGAGATCTT----GTCTCCCTCATAGC--TGTGTCTTCAGTAAAT--GTGC-GTTTGGAATTCTCTGGGACATGGGAAGCCACTCGCTCAGAAGGGGGAAGATTTCACCAACTTGCCCCATATGTGTGTCTCCCAAGCGTGTTTTATGCCACCCATGGCTGAAGCTCCATCTGAAAT-------CAGAGGCAGCTGGCAGATTCCTGGGGTGGTGCCCGCAATTTCTCATTCTGCGTATTTATGAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1524741 401 - 107702431 T---TGGTAGTCACTGTG-------------CCGAGGTCAGATTTTTGTT-TAAAGGATGTGTGCTCTT---TCCAGAG----------AGTGC-------------------ACCTGCCACACGCCGA---------------GGCTCCTGTC-------------CTTT---CCCC---AGTGTGACTTTTG---------------------------------------------------------------TCTCTAATTTCGGAGATGCAGCATTTCAAAGAGCTACGAACACCTGGGGAGAAATTACCAGATGAACTT----GTCTCCCTCATAGC--TGTGTCTTCAGTAAAC--GTGC-GTTTGGAATTCTCTGGGACATGGGAAGCCACTCGCTCAGAAGGGGGAGGATTTCACCAACTTGCCCCATATGTGTGTCTCCCAAGCGTGCTTTATGCCACCCATGGCTGAAGCTCCATCTGAAAC-------CAGAGGCAGCTGGCAGATTCCTGGGGTGGTGCCCCCAATTTCTCATCCCGTGTATTTATGAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1017109 402 - 2200435 T---TGGTAGTCACTGTG-------------CCAAGGTCAGATTTTTGTTGTAAAGGATCTGTGCTCTT---CCCAGAG----------AGTGC-------------------ACCTGCCACACGCGGA---------------GGCTCCTGTC-------------CTTT---CCCC---AGTGTGACTTTTG---------------------------------------------------------------TCTCTAATTTCGGGGATGCAGCATTTCAAAGAGCTACGAACACCTGAGGAGAAATTACCAGATGAACTT----GTCTCCCTCATAGC--TGTGTCTTCAGTAAAC--GTGC-GTTTGGAATTCTCTGGGACATGGGAAGCCACTCGCTCAGAAGGGGGAAGATTTCACCAACTTGCCCCATATGTGTGTCTCCCAAGCGTGTTTTATGCCACCCATGGCTGAAGCTCCATCTGAAAT-------CAGAGGCAGCTGGCAGATTCCTGGGGTGGTGCCCGCAATTTCTCATCCTGTGTATTTATGAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1447826 402 - 13651311 T---TGGTAGTCACTGTG-------------CCAAGGTCAGATTTTTGTTGTAAAGGATCTGTGCTCTT---CCCAGAG----------AGTGC-------------------ACCTGCCACACGCCGA---------------GGCTCCTGTC-------------CTTT---CCCC---AGTGTGACTTTTG---------------------------------------------------------------TCTCTAATTTCTGAGATGCAGCATTTCAAAGAACTACGAACACCTGGGGAGAAATCAGCAGATGAACTT----GTCTCCCTCATGGC--TGTGTCATCAGTCAAC--GTGC-ATTTGGAATTCTCTGGGACATGGGAAGCCGCTCGCTCAGAAGGGGGAGGATTTCTCCAACTTGCCCCATATGTGTGTCTCCCAAGCGTGTTTTATGCCACCCATGGCTGAAGCTCCATCTGAAAT-------CAGAGGCAGCTGGCAGATTCCTGGGGCAGTGCCTGCAATTTCTCATCCTGTGTATTTATGAC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1437318 404 - 108792865 T---GGGTAGTCACTGTG-------------CCTAGGTCAGGTTTTTGCTCTAAGGGAGCTGTGTTCTT---CTCAGAG----------CATGC-------------------ACCTGCCACAGACC-A---------------GCCTCGTTTC-------------CTTT---CCCC---AGTGTGACTCTTA---------------------------------------------------------------TCTCCCATTTCTGAGATGTAGCATTTCAAGGAGCTAGGAACCCCTGGGGAGAAATCACCA---GAATGC----ATCTCCCTCATAGCTGTGTGTTTTCAGCAGAC--GTGTGGTTCAGAATACTCTGAGACACGGGAAGCCACTTGCTCAGGAGGGGAAAGATTTCGCCAGCTTGCCCCATATACATGTCTCCCACACACGTCTCATGCCTTCCGTGGCTGAAGCTCCATCTGAAGCCAG--TGCAGAGGCAGCTGGCAGACTCCT-GGGTGGTGCCGCAAATTTCTCAT-CTATGTATCTGTGAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1266323 400 - 7082604 T---GGGCAGTCACTGTG-------------CCT-GGTCAGGGTTTTGCTCTAAGGGAGCTGTGCTCTT---CTCGGAG----------AGTGC-------------------ACCTGCCACAGACC-A---------------GCCTCCTTTC-------------CTCT---CCCC---AGTGTGACTTTTA---------------------------------------------------------------TCTCTCATATCCGAGACGCAGCATTTCAAGGAGCTAGGAACCCCTGGGGAGAAACCACCA---GAATGT----GTCTCCCTCATAGC--TGTGTTTTAAGCAGAT--G-GCAACTTGGAATACTCTGAGACATGGGAAGCCACTTGCTCAGGA-GGGAAAAATGTCACCAACTTGCCCTGTGTACATGTCTCCCGTGCCTGTCTCATGCCTCCCGTGGCTGAAGTTCCATCTAAAACCAG--TTCAGCAGCAGCCGGCAGACTCCT-GGGTGCTCCCGCAAATTTCTCATCCTATGTATCTATGAC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1360084 400 + 1864846 T---GGGCAGTCACTGTG-------------CCT-GGT-AGGGTTTTGCTCTAAGGGAGCTGTGCTCTT---CTCGGAG----------AGTGC-------------------ACCTGCCACAGACC-A---------------GCTGCTTTTC-------------CTTT---CCCC---AGTGTGACTTTTA---------------------------------------------------------------TCTCTCATTTCCGAGATGCAGCATTTCAAGGGACTAGGAACCCCTGGGGAGAAATCACCA---GAATGT----GTCTCCCTCGTGGCTGTGTGTTTTCAGCAGAT--G-GTGGTTTGGAATACTCTGAGACAT-GGAAGCCACTTGCTCAGGA-GGGAAAACTTTGGCCAGCTTGCCCCGTGTACATGTCTCCCATGCGCATCTCATGCCTCCCGTGGCTGAAGTTCCGTCTGAAGCCGG--TGCAGGGGCAGCTGGCAGACTCCT-GGGTGGTCCCGCAAATTTCTCAGCCTATGTATCTATGAC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 178861 403 + 287728 T---GGGTAGTCACTGTG-------------TCCAGGTCAGGTTTTTGCTCTAAGGGAGCTGTGCTCCT---CCCAGAG----------AGTGC-------------------ACCTGCCACAGACC-A---------------GCCTCCTTTC-------------CTTT---CCCC---AGTGTGACTTTTA---------------------------------------------------------------TCTCTCATTTCTGAGATGCAGCATTTCAAGGAGCTAGGAACCCCTGGGGAGAACTCACCA---GAATGT----GTCTCCCTC--AGCTGTGTGTTTTCAGCAGAC--GTGTGGTTTGGAATACTCTGAGACATGGGAAGCCACTTGCTCAGGAGGGGAAAAATCTCACCAACTTGCCCCGTGTGCGTGTCTCCCATGCACGTCTCACGCCTCCCATGGCTGAAGTTCCATCTGAAGCCAG--TGCAGAGGCAGCTGGCAGACTCCT-GGGTGGTGCCGCAAATTTCTCATCCTGCGTATCTATGAC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 956987 355 + 5252280 TAGCTGGTGGTCATTGCA-------------CCTGATTCAGATTTTTT---TATGAAAATCGTGCTCCT---TTGAGAG----------A-------------------------------------------------------------------------------TT---CCCC---AGCAGG---CTTA---------------------------------------------------------------TC-CTGACTTCTGAGATGC--CGTCCTAGTGA-----GGACACCTGGGCATGAACCCCGAG--GCCTCT----GTCTCCCTGGGGAC--TGCTTCCT-AGGAAGC--ACGT-GTGTAGAACGCTCTGA-ACCTGGGCAGCCACCGGTGCAGAGGGGCTG----TTTACTCCCATGTTCCCTTCCTGTCTCTCCC-TGCACCTTGCATGACGTC--TGGTTGAAGTTCAATTTGAAACAAGCCCCCAAAAGTGGCTGGCAGATTCCCATGGGGAAGCCATGCACTTCTCACCCCAAATGTTCATGAC i otoGar3.GL873658 C 0 I 538 s mm10.chr12 90035074 523 - 120129022 t---tgtgagccaccatgtggttgttgggaattgaactcagaacctctggaagagcaatcagtgctcttaacctctgagtcatctctccagcccTCATTCTGGTATTTTTAAAAGTTCCCACATACTGGATTCTCACTCTGCCTGCCTCCTCCCTCCATCCATCCCTCTCT---CCCCATTAGAGTGCTTTTCAGGCATAGCTCAGATTTTAGCCACGTCCTTCATACTCTTTCATTGCCTTTGCTAGAAATGTTAGCCATTAATTTCTAGGATACAGCATTTCTCACACCTAC-AACACCTGGA-AGAAATC-CTGGAAGTTTTTTTTAATCTTCCTTGAAAC--TGTATCTTTAGAAAAATGATGTGGCTTGACATAAT-TAGGACAGGAGAAGACACGAGCTTGGTAGG-------------CAGCTCATTTCCTAAG-----CTCCCTTGAGTATGACATGGCTTT--TGGGTCATATTCAATGCCAAAG-----TCCAAGAGCCTCTGGCAGA-TGTTAGAGTGATGCTGG-GATTTTTCACCCTA-GTGTTTATTAC i mm10.chr12 I 135 C 0 s dasNov3.JH576208 1785191 353 + 4416731 --------------------------------------------TTTAT--------ACTCATGTTCTT---AGAAGAG----------AGAAC-------------------AATAACTACATCCTAG---------------GGTTGCTTTC-------------CTTTTTCTTCC---AATGCACCACTTA---------------------------------------------------------------TCATTAATTTCTGAGATGCAGTATTTCAAAGAGTTTGAATAACCTGGGGAGAAATTACAAGGAGAAGTT----GGCTTACTCAAAAC--T--------------T--CTATAGTTTGAAACACTATGTGACATGGGAAACTACTAATTCAGATAATGGCATATTTCTTCAATTTATAC----------TTTTTCATATATGTTTTATGCTATCTTTGGTTAGAGTACAATTTGAAATAATTAGTCGGAAGTTGTGAACACATTCCTGGAGTGATACAGTTCATTCCTTATCTTCATAATTCATGAT i dasNov3.JH576208 C 0 C 0 a score=432895.000000 s hg38.chr2_KI270774v1_alt 177553 35 + 223625 CACATATCTCCCCAATGCAAAAATGGGATCAATTA s panTro5.chr2A 1474197 35 + 111504155 CAGATATCTCCCCAATGAAAAAATGGGATCAATTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1413405 35 + 114371477 CAGATATCTCCCCAATGAAAAAATGGGATCAATTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1437344 35 + 1464242 CAGATATCTCCCCAATGCAAAAATGGGATCAATTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1162202 35 + 81552678 CAAAAATCTCCCCAATGCAAAAATGGGATCAATTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1490008 35 + 108979918 CAAATATCTCCCCAATGCAAAAATGGGGTCAATTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1462429 35 - 111193037 CAAATATCTCCCCAATGCAAAAATGGGGTCAATTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1490818 35 + 3644372 CAAATATCTCCCCAATGCAAAAATGGGGTCAATTA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1445049 35 - 10304083 CAAATATCTCCCCAATGCAAAAATGGGGTCAATTA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1525142 35 - 107702431 CAAATATCTCCCCAGTGCAAAAATGGGGTCAATTA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1017511 35 - 2200435 CAAATATCTCCCCAATGCAAAAATGGGGTCAATTA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1448228 35 - 13651311 CAAATATCTACCCAATGCAAAAATGGGGTCAATTA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1437722 35 - 108792865 TAAATATCTCCCCAATGCAAAAATGGGATCAATTA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1266723 35 - 7082604 TAAATATCTCCCCAATGCAGAAATGGGATCACTTA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1360484 35 + 1864846 TAAATATCTCCCCAATGCAAAAATGGGATCAATTA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 179264 35 + 287728 TAAATATCTCCCCAATGCAAAAATGGGGTCAATTA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 957880 35 + 5252280 caAATATCTCCCTAATACAGAAATGAGATCAGCTG i otoGar3.GL873658 I 538 C 0 s mm10.chr12 90035597 35 - 120129022 TGGATGTCTCCAAAAAGCAAAACTCCAGTCAACCA i mm10.chr12 C 0 I 196 s dasNov3.JH576208 1785544 35 + 4416731 TGATTATCTCCTAAATACAGAAATTTGATTAACTA i dasNov3.JH576208 C 0 C 0 a score=826908.000000 s hg38.chr2_KI270774v1_alt 177588 100 + 223625 ACTTACGTATAGTGGGGCCT-CTTT-TTCATGTTCTAAGAGGAATTCATCCCTGTGATGGGAAGCAGAAGAGT-TTTACGTGG-CAGGGGAGATGCACATGGGA s panTro5.chr2A 1474232 100 + 111504155 ACTTACGTACAGTGGGGCCT-CTTT-TTCATGTTCTAAGAGGAATTCATCCCTGTGATGGGAAGCAGAAGAGT-TTTACGTGG-CAGGGGAGATGCACATGGGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1413440 100 + 114371477 ACTTACGTACAGTGGGGTCT-CTTT-TTCATGTTCTAAGAGGAATTCATCCCTGTGATGGGAAGCAGAAGAGT-TTTACGTGG-CAGGGGAGATGCACATGGGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1437379 97 + 1464242 ACTTACGTATAGTGGGACCT-CTTT-TTCATGTTCTAAGAGGAATTCATCCCTGTGATGGGA---AGAAGAGC-TTTACGTGG-CAGGGGAGATGCACATGGGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1162237 100 + 81552678 ACTTAGGTATAGTGGGGCCT-CTTT-TTCATGTTCTAAGAGGAATTCATCCCCGTGATGGGAACCAGAAGAGT-TTTACATGG-CAGGGGAGATGCACATGGGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1490043 96 + 108979918 ACTTCCATATAATGGGGCCT-CTCT-TTTATGTTCTAAGAGGAATTCATCCCCGTGATGGGAAGCAGAAGAGC-TTTATGTGG-CCGGGGAAATGTGTGC---- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1462464 96 - 111193037 ACTTCCATATAATGGGGCCT-CTCT-TTTATGTTCTAAGAGGAATTCATCCCCGTGATGGGAAGCAGAAGAGC-TTTATGTGG-CCGGGGAAATGTGTGC---- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1490853 96 + 3644372 ACTTCCATATAATGGGGCCT-CTCT-TTTATGTTCTAAGAGGAATTCATCCCCGTGATGGGAAGCAGAAGAGC-TTTATGTGG-CCGGGGAAATGTGTGC---- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1445084 96 - 10304083 ACTTCCATGTAGTGGGGCCT-CTTT-TTTATGTTCTAAGAGGAATTCATCCCCGTGATGGGAAGCAGAAGAGC-TTTATGTGG-CCGGGGAAATGCATGC---- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1525177 96 - 107702431 ACTTCCATATAGTGGGGCCT-CTTT-TTTATGTTCTAAGAGGAATTCATCCCCGTGATGGGAAGCAGAAGAGC-TTTATGTGG-CCGGGGAAATGCATGC---- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1017546 97 - 2200435 ACTTCCATGTAGTGGGGCCTACTTT-TTTATGTTCTAAGAGGAATTCATCCCCGTGATGGGAAGCAGAAGAGC-TTTATGTGG-CCGGGGAAATGCGTGT---- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1448263 96 - 13651311 ACTTCTATATAGTGGGGCCT-CTTT-TTTATGTTCTAAGAGGAATTCATCCTCGTGATGGGAAGCAGACAAGC-TTTATGTGG-CCAGGAAAATGCATGG---- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1437757 98 - 108792865 ACTTATATATAGTGGGACCC-CTTT-TTTATGTTCTAAGAGGAATTCATCCCCATGATGGGAAGTGGAAGCGCTTTTATACAGTCAGGGGAAATGCATGC---- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1266758 97 - 7082604 ACTTACATAGAGTGGGACCC-CCTT-TTTATGGTCTAAGAGGAATTCATCTCCATGATGGGAAGCGGAAGAGC-TTTATATGGTCAGGGGAAATGCATGC---- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1360519 96 + 1864846 ACCTACATAAAGTGGGACCC-CTTT-TTTATGTTCTAAGAGGAATTCATCCCCATGATGGGAAGTGGAAGAGC-TTTATGTGGTCAGGGG-AATGCATGC---- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 179299 96 + 287728 ACTTATATAGAGTGTGACTC-CTTT-TTTACGTTCTAAGAGGAAGTCA-CCCCATGATGGGAAGTGGAAGAGC-TTTATATGGTCAGGGGAAATGCATGC---- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 957915 89 + 5252280 ACTTGTGGTTATTGGGGTCT-CTC--TTCACATTTTAAGAGGAGTTCCTCCCCATG-TGGGAGGGAGAAAGGC-CTAGCATGAGAAAGTAAGAT---------- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1785579 82 + 4416731 ATTAATATATAATGAAAACT-ATTTGCACATGTTT------------GTTGCCTTGTAGGAAGAGAGAAAACT-TTTATATAA-CAAAGGGAATATA------- i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90035632 196 - 120129022 I a score=8551.000000 s hg38.chr2_KI270774v1_alt 177688 9 + 223625 GATGCATGC s panTro5.chr2A 1474332 9 + 111504155 GATGCATGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1413540 9 + 114371477 GATGCATGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1437476 9 + 1464242 GATGCATGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1162337 9 + 81552678 GATGCACAC i nomLeu3.chr19 C 0 I 78 s mm10.chr12 90035828 9 - 120129022 AAGACATGT i mm10.chr12 I 196 I 1 s dasNov3.JH576208 1785661 4 + 4416731 -----ATGA i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 179395 0 + 287728 C e saiBol1.JH378218 1266855 0 - 7082604 C e cebCap1.NW_016107827v1 1360615 0 + 1864846 C e otoGar3.GL873658 958004 0 + 5252280 C e calJac3.chr14 1437855 0 - 108792865 C e colAng1.NW_012118821v1 1448359 0 - 13651311 C e manLeu1.NW_012103754v1 1017643 0 - 2200435 C e chlSab2.chr14 1525273 0 - 107702431 C e cerAty1.NW_012000820v1 1445180 0 - 10304083 C e macNem1.NW_012011978v1 1490949 0 + 3644372 C e macFas5.chr13 1462560 0 - 111193037 C e rheMac8.chr13 1490139 0 + 108979918 C a score=359547.000000 s hg38.chr2_KI270774v1_alt 177697 43 + 223625 TTTACGGCATTCAGGCCAGGAGCTATTGGGGCTTTGGCAACTA s panTro5.chr2A 1474341 43 + 111504155 TTTACGGCATTCAGGCCGGGAGCTATTGGGGCTTTGGCAACTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1413549 43 + 114371477 TTTACGGCATTCAGGCCGGGAGCTATTGGGGCTTTGGCAACTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1437485 43 + 1464242 TTTACGGCATTCAGGCCGGGAGCTATTGGGGCTTTGGCAACTG i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chr13 1490139 43 + 108979918 TTTATGGCACTCAGGCCAGGAGCTGCTGGCGCTTTGGCAACGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1462560 43 - 111193037 TTTATGGCACTCAGGCCAGGAGCTGCTGGCGCTTTGGCAACGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1490949 43 + 3644372 TTTATGGCACTCAGGCCAGGAGCTGCTGGCACTTTGGCAACGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1445180 43 - 10304083 TTTATGGCACTCAGGCCAGGAGCTGCTGGCGCTTTGGCAACGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1525273 43 - 107702431 TTTATGGCACTCAGGCCAGGAGCTGCTGGGGCTTTGGCAACAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1017643 43 - 2200435 TTTATGGCACTCAGGCCAGGAGCTGCTGGGGCTTTGGCAACGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1448359 43 - 13651311 TTTATGGCATTCAGGCCAGGAGCTACTGGCGCTTTGGCAACGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1437855 43 - 108792865 TTCATGGCATGCAGGCCAGGAGTTGTTGGAGTTTTGTCAACGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1266855 43 - 7082604 TTTATGGCATTCAGGCCAGGAGTTGTTGGAGTTTTGTCAACAA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1360615 43 + 1864846 TTTATGGCATTCGGGCCAGGAGTTGTTGGAGTTTTGTCAACGG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 179395 21 + 287728 TTTGTGGCATTCAGGCC----------------------ACGA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 958004 34 + 5252280 ---------CTCCCACCAGGGGCTCCTGGGGCCTGGTCAAGCA i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90035838 42 - 120129022 TATACGGTA-AAGGGCTATGGAAAATTGGAGCTTTGTCCATGA i mm10.chr12 I 1 C 0 s dasNov3.JH576208 1785665 43 + 4416731 GTTAAGGCATTCAGGTAAGGAGTTCTTGGGGCTTTGTCAACAA i dasNov3.JH576208 C 0 C 0 e nomLeu3.chr19 1162346 78 + 81552678 I a score=291350.000000 s hg38.chr2_KI270774v1_alt 177740 24 + 223625 TTTTCATATTTTGAGAGGAAAGTG s panTro5.chr2A 1474384 24 + 111504155 TTTTCATATTTTGAGAGGAAAGTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1413592 24 + 114371477 TTTTCATATTTTGAGAGGAAAGTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1437528 24 + 1464242 TTTTCATATTTTGAGAGGAAAGTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1162424 24 + 81552678 TTTTCATATTTTGAGAGGAAAGTG i nomLeu3.chr19 I 78 C 0 s rheMac8.chr13 1490182 24 + 108979918 TTTTCGTATTTTGAGAGGAAAGTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1462603 24 - 111193037 TTTTCGTATTTTGAGAGGAAAGTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1490992 24 + 3644372 TTTTCGTATTTTGAGAGGAAAGTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1445223 24 - 10304083 TTTTCGTATTTTGAGGGGAAAGTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1525316 24 - 107702431 TTTTCATATTTTGAGAGGAAAGTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1017686 24 - 2200435 TTTTCGTATTTTGAGGGGAAAGTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1448402 24 - 13651311 TTTTCATATTTTGAGAGGAAAGTG i colAng1.NW_012118821v1 C 0 M 474 s calJac3.chr14 1437898 24 - 108792865 TTTTTGTATTTTGAGAGCAAAGTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1266898 24 - 7082604 TTTTCAAATTTTGAGAGCAAAGTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1360658 24 + 1864846 TTTTCATATTTTGAGAGCAAAGTG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 179416 24 + 287728 TTTTCATATTTTGAGAGCAAAGTG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 958038 24 + 5252280 GTTTAATATTCTGAGAGAAAAGTG i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90035880 20 - 120129022 TATTGATATTCTAAGAACTA---- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1785708 24 + 4416731 TTTTAATATTTTCAGAGAAAATTG i dasNov3.JH576208 C 0 C 0 a score=2075933.000000 s hg38.chr2_KI270774v1_alt 177764 282 + 223625 --------GGACTTC---------------ATTTCTTCACATTGCAATTTT-TCTGATTAATC------------------------------------ATGGCCTGGAGGAAGAAGCTGAAGGTAGAGAGACTGTGCAGGGCACGTTGACTTCAGAATAG----GAGCACCCTCTAAAATAGCTGGATT-TGCTGTCATCATTCTTGTTTTTAACACAGCAATACACCCCAGAT-AACAGCAATGCAG---CAAAATAGATGCTCATAGTCAACAAGCAAAGTGGCTCTG-AGCCCCTCT------TCTGAGGCCGCTCGTTCAGACAGCCAGGTGCACGCTGTGC-------TGCCCCTCCAC s panTro5.chr2A 1474408 280 + 111504155 --------GGACTTC---------------ATTTCTTCACATTGCAATTTT-CCTGATTAATC------------------------------------ATGGCCTGGAGGAAGAAGCTGAAGGTAGAGAGACTGTGCAGGGCACGTTGACTTCAGCATAG----GAGCACCCTCTAAAATAGCTGGATT-TGCTGTCATCATTC------TTAACACAGCAATACACCCCAGAT-AACAGCAATGCAG---CAAAATAGATGCTCATAGTCAACAAGCAAAGTGGCTCTG-AGCCCCTCTT--CCATCTGAGGCCGCTCGTTCAGACAGCCAGGTGCACGCTGTGC-------TGCCCCTCCAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1413616 280 + 114371477 --------GGACTTC---------------ATTTCTTCACATTGCAATTTT-CCTGATTAATC------------------------------------ATGGCCTGGAGGAAGAAGCTGAAGGTAGAGAGACTGTGCAGGGCACGTTGACTTCAGCATAG----GAGCACCCTCTAAAATAGCTGGATT-TGCTGTCATCATTC------TTAACACAGCAATACACCCCAGAT-AACAGCAATGCAG---CAAAATAGATGCTCATAGTCAACAAGCAAAGTGGCTCTG-AGCCCCTCTT--CCATCTGAGGCCGCTCGTTCAGACAGCCAGGTGCACGCTGTGC-------TGCCCCTCCAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1437552 285 + 1464242 --------GGACTTC---------------ATTTCTTCACATTGCAATTTT-CCTGATTAATC------------------------------------ATGGCCTGGAGGAAGAAGCTGAAGGTAGAGAGACTGTGCGGGGCACGTTGACTTCAGAATAG----GAGCACCCTCTAAAATGGCTGAATT-TGCTGTCATCATTCTTGTTTTTAACACAGCAATACACCCCAGAT-AACAGCAATGCAG---CAAAAT-GATGCTCATAGTCAATAAGCAAAGTGGCTCTG-AGCCCCTCTT--CTGTCTGAGGCCGCTCGTTCAGACAGCCAGGTGCATGCTGTGC-------TGCCCCTCCAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1162448 295 + 81552678 --------GGACTTC---------------ATTTCTTCACATTGCAATTTT-CTTGATTAATCATGGCCTGGAGGAAGATGCAATTTTCTTGATTAATTATGGCCTGGAGGAAGAAGCTGAAGGTAGAGAGACTGTGCAGGGCACCTTGACTTCAGAGTAGA---GAG-----------------------------CATTATTCTTGCTTTTAATACAGCAATACACCCCAGAT-TACAGCAATGCAG---CACAATAGTTGCTCATAGTCAACCAGCAAAGTGGCTCTG-AGCCCCTCTT--CCATCTGACGCCGCTCGTTCAGACAGCCAGGTGCATGCTGTGC-------TGCCCCTTCAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1490206 290 + 108979918 --------GGACTTC---------------ATTTCTTCACATTGCAATTTT-CTTGATTACCC------------------------------------ATGGCCTGGAGGAAGAAGCTGAAGGTAGAGAGACCGTGCAGGGCACGCTGACTTCAGACTGGAGAGCAGCACGTTGTAAAGCAGCTGAATT-TGCTGTAATTATTCTTGTTTTTAACACAGCATTGCACCCCAAAT-AACAGCAATGCAG---CAAAATAGATTCTCACAGTCAACACGCGAAGTGGCTCTG-AGCCCCTCCT--CCATCTGACGCCGCTCGTTCAGACAGCCAGGTGCACGCCGTGC-------TGCCCCTCCGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1462627 290 - 111193037 --------GGACTTC---------------ATTTCTTCACATTGCAATTTT-CTTGATTACCC------------------------------------ATGGCCTGGAGGAAGAAGCTGAAGGTAGAGAGACCGTGCAGGGCACGCTGACTTCAGACTGGAGAGCAGCACGTTGTAAAGCAGCTGAATT-TGCTGTAATTATTCTTGTTTTTAACACAGCATTGCACCCCAAAT-AACAGCAATGCAG---CAAAATAGATTCTCACAGTCAACACGCGAAGTGGCTCTG-AGCCCCTCCT--CCATCTGACGCCGCTCGTTCAGACAGCCAGGTGCACGCCGTGC-------TGCCCCTCCGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1491016 290 + 3644372 --------GGACTTC---------------ATTTCTTCACATTGCAATTTT-CTTGATTACCC------------------------------------ATGACCTGGAGGAAGAAGCTGAAGGTAGAGAGACCGTGCAGGGCACGCTGACTTCAGACTGGAGAGCAGCACGTTGTAAAGCAGCTGAATT-TGCTGTAATTATTCTTGTTTTTAACACAGCATTGCACCCCAAAT-AACAGCAATGCAG---CAAAATAGATTCTCACACTCAACACACGAAGTGGCTCTG-AGCCCCTCCT--CCATCTGACGCCGCTCGTTCAGACAGCCAGGTGCACGCCGTGC-------TGCCCCTCCGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1445247 290 - 10304083 --------GGACTTC---------------ATTTCTTCACATTGCAATTTT-CTTGATTACCC------------------------------------GTGGCCTGGAGGAAGAAGCTGAAGGTAGAGAGACCGTGCAGGGCACGCTGACTTCAGACTAGAGAGCAGCACCCTCTAAAGCAGCTGAATT-TGCTGTAATTATTCTTGTTTTTAACACAGCATTGCACCCCAAAT-AACAGCAATGCAG---CAAAATAGATTCTCACAGTCAACACGCGAAGTGGCTCTG-AGCCCCTCCT--CCATCTGACGCCGCTCGTTCAGACAGCCAGGTGCACGCTGTGC-------TGCCCCTCGGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1525340 290 - 107702431 --------GGACTTC---------------ATTTCTTCACATTGCAATTTT-CTCGATTACCC------------------------------------GTGGCCTGGAGGAAGAAGCTGAAGGTAGCGAGACCGTGCAGGGCACGCTGACTTCAGACTAGAGAGCAGCACCCTGTAAAGCAGCTGAATT-TGCTGTCATTATTCTTGTTTTTAACACAGCATTGCACCCCAAAT-AACAGCAATGCAG---CAAAATAGATTCTCACAGTCAACACGCGAAGTGGCTCTG-AGCCCCTCCT--CCATCTGACGCCGCTCGTTCAGACAGCCAGGTGCACGCTGTGC-------TGCCCCTCCGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1017710 290 - 2200435 --------GGACTTC---------------ATTTCTTCACATTGCAATTTT-CTTGATTACCC------------------------------------ATGGCCTGGAGGAAGAAGCTGAAGGTAGAGAGACCGTGCAGGGCACGCTGACTTCAGACTAGAGAGCAGCACCCTGGAAAGCAGCTGAATT-TGCTGTAATTATTCTTGTTTTTAACACAGCATTGCACCCCAAAT-AACAGCAATGCAG---CAAAATAGATTCTCACAGTCAACACGCGAAGTGGCTCTG-AGCCCCTCCT--CCATCTGACGCCGCTCGTTCAGACAGCCAGGTGCACGCCGTGC-------TGCCCCTCCGC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1437922 277 - 108792865 --------GAACTTC---------------ATTTCTTCACATTACAATTTT-CTTGATTAACC------------------------------------GTGGCTTGGAGGAAGAAGCTGCAGGTAGAGAGGCTGTGCAGGGCACAGTGACTTCACAGCAGAGAGCAGCAGTCTCTCAGACAGTGGAATC-TGCCGTC---ATTCTTGTTTTTCACAGAGCACTGCACCCCAGAT-AACAGCAACACAG---CAAATTAGATGCTCATAGACA-----------GGCTCTG-AGCCCCTCTT-CCCATCTGACGCCACTTTTTCAGACAACCAGGTGCACGCTATGC-------TGCCCCTCCGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1266922 281 - 7082604 --------GAACTTC---------------ATTTCTTCACATTGCAATTTT-CTTGATTAATC------------------------------------ATGGCTTGGAGGAAGAAGCTGGGGGTAGAGAGGCTGTGCAGGGCACAGCGACTTCAGAGTAGACAGCAGCAGTCTCTCAAACAGCTGAATC-TGCTGTCATTATTCTTGTTTCTCACAGAGCACTGCATCCCAGAT-AACAGCAACACAG---CAAATTAGATGCTCACAGGCA-----------GGCTCTG-AGCCCCTCTTCCCCATCTGACGCCACTCCTTCAGACAACCAGGTGCACGCTATGC-------TGCCCCTCCGC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1360682 281 + 1864846 --------GAACTTC---------------ATTTCTTCACATTGCAATTTT-CTTGATTAATC------------------------------------GTGGCTTGGAGGAAGAAGCTGGGGGTAGAGAGGCTGTGCAGGGCACAGTGACTTCAGAGTAGAGAGCAGCAGTCTCTCAAACAGCTGAATC-TGCTGTCATTATTCTTGTTTTTCACAGAGCACTGCACCCCAGAT-AACAGCAACACAG---CAAATTAGATGCTCATAGACA-----------GGCTCTG-AGCCCCTCTTCCCCATCTGATGCCACTCCTTCAGACAACCAGGTGCACGCTGTGC-------TGCCCCCCTGC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 179440 279 + 287728 --------GAACTTC---------------ATTTCTTCACATTGCAATTTT-CTTGATTAATC------------------------------------ATGGCTTGGAGGAAGAAGCTGGAGGCAGAGAGGCTGTGCAGGGCACAGTGACTTCAGCGTAGAGAGCAGCAGTCTCTCAAACAGCTGAATC-TGCTGTCATTATTCTTGTTTTTCAC--AGCACTGCACCCCAGAT-AACAGCAACACAG---CAAATTAGATGCTCATAGACA-----------GGCTCTG-GGCACCTCTCCCCCATCTGACGCCACTCCTTCAGACAACCAGGTGCACGCTATGC-------TGCCCCTCCGC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 958062 157 + 5252280 --------AGGCCAT---------------ATTTGCTAAGACCAGCATTGT-CTTGGTTAAA-------------------------------------GTGGCCT-GAGGAAGACAGAGAAGCCAGAG----TGTGTAA-----------TTC------------------------------TAGGTG-CACCGGCATCAACCTCGTT-----------------CCCCAGAC-AGGTGGAGAAC-------------------------------------GGCCCTGAAGCCTCTCTG--CC----------------TCATAC-------------CTGCTC-------TGCA------- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90035900 214 - 120129022 ----------ACATT---------------ATTTTCT----------TTCT-CTCTGATGTCC------------------------------------CTGGTTTGGGGGTGG--------GATAGGAACAAGAATCAA---ACTTGGACCTTGGGCC---GAGCAGCACCTCTCCCAGTGGCTGATGT-TGCTGTTGCTGCCCTTGCTTCTGAGGCAGAGCTGCACCC-------------ATACAGACTCAGGATAGCCATTCCAATACA------------AGTTTG-A-----------CAGCTTGTGGCCCATCCCACAGACAACCTCATGC--------------------------- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1785732 308 + 4416731 AGATATTAGGATATCTCCTAAAATTGAGATATATCCTAATATCTCAATTTTCCTTGATTAATC------------------------------------ATGACCTGAAGATAGAGATAAAAGATGGACTGGACCCACACAGCATTTTGACTTCAGTATAAATAGCAGTACTTCCCGAAAGAATTCATTTGTGTGGTCCTTATTCTTGTTTTT-------------ATCTCAGGTAAAAAACAATGCAG---CATAATAGAT--TGACATTTAAGAAATAATC-GTTTATA-AGAAACTTTT-TCCACAAAATGTGGTTTCCTCAGCCAGTCAGTGTCACATTAAATCGTGGAGTGTCTCTCCCC i dasNov3.JH576208 C 0 C 0 e colAng1.NW_012118821v1 1448426 474 - 13651311 M a score=3455.000000 s hg38.chr2_KI270774v1_alt 178046 1 + 223625 A s panTro5.chr2A 1474688 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1413896 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1437837 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1162743 1 + 81552678 A i nomLeu3.chr19 C 0 I 293 s rheMac8.chr13 1490496 1 + 108979918 A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1462917 1 - 111193037 A i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1491306 1 + 3644372 A i macNem1.NW_012011978v1 C 0 C 0 s manLeu1.NW_012103754v1 1018000 1 - 2200435 A i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1438199 1 - 108792865 A i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1267203 1 - 7082604 G i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1360963 1 + 1864846 A i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 179719 1 + 287728 A i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1786040 1 + 4416731 A i dasNov3.JH576208 C 0 C 0 e mm10.chr12 90036114 0 - 120129022 C e otoGar3.GL873658 958219 0 + 5252280 C e colAng1.NW_012118821v1 1448426 474 - 13651311 M e chlSab2.chr14 1525630 0 - 107702431 C e cerAty1.NW_012000820v1 1445537 0 - 10304083 C a score=32702.000000 s hg38.chr2_KI270774v1_alt 178047 8 + 223625 TCTCCTTC s panTro5.chr2A 1474689 8 + 111504155 TCTCCTTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1413897 8 + 114371477 TCTCCTTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1437838 8 + 1464242 TCTCCTTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1163037 8 + 81552678 TCTCCTGC i nomLeu3.chr19 I 293 C 0 s calJac3.chr14 1438200 8 - 108792865 TTTCCTTC i calJac3.chr14 C 0 I 2 s saiBol1.JH378218 1267204 8 - 7082604 TTTCCTTC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1360964 8 + 1864846 TTTCCTTC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 179720 8 + 287728 TTTCCTCC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 958219 5 + 5252280 ---CCCTC i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90036114 8 - 120129022 CCTCCTTT i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1786041 8 + 4416731 TCTCTTCC i dasNov3.JH576208 C 0 C 0 e colAng1.NW_012118821v1 1448426 474 - 13651311 M e manLeu1.NW_012103754v1 1018001 0 - 2200435 C e chlSab2.chr14 1525630 0 - 107702431 C e cerAty1.NW_012000820v1 1445537 0 - 10304083 C e macNem1.NW_012011978v1 1491307 0 + 3644372 C e macFas5.chr13 1462918 0 - 111193037 C e rheMac8.chr13 1490497 0 + 108979918 C a score=4815.000000 s hg38.chr2_KI270774v1_alt 178055 2 + 223625 GG s panTro5.chr2A 1474697 2 + 111504155 GG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1413905 2 + 114371477 GG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1437846 2 + 1464242 GG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1163045 2 + 81552678 AG i nomLeu3.chr19 C 0 C 0 s saiBol1.JH378218 1267212 2 - 7082604 AG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1360972 2 + 1864846 AG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 179728 2 + 287728 GG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 958224 2 + 5252280 GG i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90036122 0 - 120129022 C e dasNov3.JH576208 1786049 0 + 4416731 C e calJac3.chr14 1438208 2 - 108792865 I e colAng1.NW_012118821v1 1448426 474 - 13651311 M e manLeu1.NW_012103754v1 1018001 0 - 2200435 C e chlSab2.chr14 1525630 0 - 107702431 C e cerAty1.NW_012000820v1 1445537 0 - 10304083 C e macNem1.NW_012011978v1 1491307 0 + 3644372 C e macFas5.chr13 1462918 0 - 111193037 C e rheMac8.chr13 1490497 0 + 108979918 C a score=26740.000000 s hg38.chr2_KI270774v1_alt 178057 6 + 223625 GTCCTC s panTro5.chr2A 1474699 6 + 111504155 GTCCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1413907 6 + 114371477 GTCCTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1437848 6 + 1464242 GTCCTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1163047 6 + 81552678 GTCCTC i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1438210 6 - 108792865 GTCCTC i calJac3.chr14 I 2 C 0 s saiBol1.JH378218 1267214 6 - 7082604 GTCCTC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1360974 6 + 1864846 GTCCTC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 179730 6 + 287728 GTCCTC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 958226 4 + 5252280 --CCCC i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1786049 5 + 4416731 -TCCTC i dasNov3.JH576208 C 0 I 201 e mm10.chr12 90036122 0 - 120129022 C e colAng1.NW_012118821v1 1448426 474 - 13651311 M e manLeu1.NW_012103754v1 1018001 0 - 2200435 C e chlSab2.chr14 1525630 0 - 107702431 C e cerAty1.NW_012000820v1 1445537 0 - 10304083 C e macNem1.NW_012011978v1 1491307 0 + 3644372 C e macFas5.chr13 1462918 0 - 111193037 C e rheMac8.chr13 1490497 0 + 108979918 C a score=1727.000000 s hg38.chr2_KI270774v1_alt 178063 4 + 223625 AGTA s panTro5.chr2A 1474705 4 + 111504155 AGTA i panTro5.chr2A C 0 I 214 s panPan2.chr2A 1413913 4 + 114371477 AGTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1437854 4 + 1464242 AGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1163053 4 + 81552678 AGTG i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1438216 4 - 108792865 AGTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1267220 4 - 7082604 AGTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1360980 4 + 1864846 AGTG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 179736 3 + 287728 AGT- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 958230 1 + 5252280 G--- i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90036122 0 - 120129022 C e dasNov3.JH576208 1786054 201 + 4416731 I e colAng1.NW_012118821v1 1448426 474 - 13651311 M e manLeu1.NW_012103754v1 1018001 0 - 2200435 C e chlSab2.chr14 1525630 0 - 107702431 C e cerAty1.NW_012000820v1 1445537 0 - 10304083 C e macNem1.NW_012011978v1 1491307 0 + 3644372 C e macFas5.chr13 1462918 0 - 111193037 C e rheMac8.chr13 1490497 0 + 108979918 C a score=66082.000000 s hg38.chr2_KI270774v1_alt 178067 26 + 223625 CCTGCACCTGAGTGGTCCCGGGTGCT s panTro5.chr2A 1474923 26 + 111504155 CCTGCACCTGAGTGGTCCCGGGTGCT i panTro5.chr2A I 214 C 0 s panPan2.chr2A 1413917 26 + 114371477 CCTGCACCTGAGTGGTCCCGGGTGCT i panPan2.chr2A C 0 I 143 s gorGor5.CYUI01015607v1 1437858 26 + 1464242 CCTGCACCTGAGTGGTCCCGGGTGCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1163057 26 + 81552678 CCTGCACCTGAGTGGTCCCGGGTGCT i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1438220 26 - 108792865 CCTGCACCTGCGTGGCCCCAGGTGCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1267224 26 - 7082604 CCTGCACCTGCGTGGCCCCAGGTGCT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1360984 26 + 1864846 CCTGCATCTGCGTGGCCCCGGGTGCT i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 958231 25 + 5252280 CCTGC-CCACCATGCTCTGTGGTGCC i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 179739 0 + 287728 C e mm10.chr12 90036122 0 - 120129022 C e dasNov3.JH576208 1786054 201 + 4416731 I e colAng1.NW_012118821v1 1448426 474 - 13651311 M e manLeu1.NW_012103754v1 1018001 0 - 2200435 C e chlSab2.chr14 1525630 0 - 107702431 C e cerAty1.NW_012000820v1 1445537 0 - 10304083 C e macNem1.NW_012011978v1 1491307 0 + 3644372 C e macFas5.chr13 1462918 0 - 111193037 C e rheMac8.chr13 1490497 0 + 108979918 C a score=-150.000000 s hg38.chr2_KI270774v1_alt 178093 1 + 223625 C s panTro5.chr2A 1474949 1 + 111504155 C i panTro5.chr2A C 0 C 0 s nomLeu3.chr19 1163083 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1438246 1 - 108792865 G i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1267250 1 - 7082604 C i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1361010 1 + 1864846 G i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 958256 1 + 5252280 C i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 179739 0 + 287728 C e mm10.chr12 90036122 0 - 120129022 C e dasNov3.JH576208 1786054 201 + 4416731 I e colAng1.NW_012118821v1 1448426 474 - 13651311 M e manLeu1.NW_012103754v1 1018001 0 - 2200435 C e chlSab2.chr14 1525630 0 - 107702431 C e cerAty1.NW_012000820v1 1445537 0 - 10304083 C e macNem1.NW_012011978v1 1491307 0 + 3644372 C e macFas5.chr13 1462918 0 - 111193037 C e rheMac8.chr13 1490497 0 + 108979918 C e gorGor5.CYUI01015607v1 1437884 0 + 1464242 C e panPan2.chr2A 1413943 143 + 114371477 I a score=59985.000000 s hg38.chr2_KI270774v1_alt 178094 25 + 223625 AGGGGTCTGGGCAGACGCCACAGGG s panTro5.chr2A 1474950 25 + 111504155 GGGGGTCTGGGCAGATGCCACAGGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1414086 25 + 114371477 GGGGGTCTGGGCAGACGCCACAGGG i panPan2.chr2A I 143 C 0 s gorGor5.CYUI01015607v1 1437884 25 + 1464242 GGGGGTCTGGGCAGACGCCACAGGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1163084 25 + 81552678 GGGGGTCTGGGCAGACGCCACAGGG i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1438247 24 - 108792865 -GGGCTCTGGGCAGATGCCACAGCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1267251 24 - 7082604 -AGGGTCTGGGCAGATGCCACAGGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1361011 24 + 1864846 -GGGGTCTGGGCAGACGCCACAGGA i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 958257 21 + 5252280 ---CAGCTGGGCCAAC-CTACAGGG i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 179739 0 + 287728 C e mm10.chr12 90036122 0 - 120129022 C e dasNov3.JH576208 1786054 201 + 4416731 I e colAng1.NW_012118821v1 1448426 474 - 13651311 M e manLeu1.NW_012103754v1 1018001 0 - 2200435 C e chlSab2.chr14 1525630 0 - 107702431 C e cerAty1.NW_012000820v1 1445537 0 - 10304083 C e macNem1.NW_012011978v1 1491307 0 + 3644372 C e macFas5.chr13 1462918 0 - 111193037 C e rheMac8.chr13 1490497 0 + 108979918 C a score=54315.000000 s hg38.chr2_KI270774v1_alt 178119 8 + 223625 TCTCCTTC s panTro5.chr2A 1474975 8 + 111504155 TCTCCTTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1414111 8 + 114371477 TCTCCTTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1437909 8 + 1464242 TCTCCTTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1163109 8 + 81552678 TCTCCTGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1490497 8 + 108979918 TCTCCTTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1462918 8 - 111193037 TCTCCTTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1491307 8 + 3644372 TCTCCTTC i macNem1.NW_012011978v1 C 0 C 0 s manLeu1.NW_012103754v1 1018001 8 - 2200435 TCTCCTTC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1438271 8 - 108792865 TCTCCTTC i calJac3.chr14 C 0 T 71 s saiBol1.JH378218 1267275 8 - 7082604 TCTCCTTC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1361035 8 + 1864846 CCTCCTTC i cebCap1.NW_016107827v1 C 0 C 0 s mm10.chr12 90036122 8 - 120129022 TCTCCTCC i mm10.chr12 C 0 C 0 e aotNan1.NW_018513311v1 179739 0 + 287728 C e otoGar3.GL873658 958278 0 + 5252280 C e dasNov3.JH576208 1786054 201 + 4416731 I e colAng1.NW_012118821v1 1448426 474 - 13651311 M e chlSab2.chr14 1525630 0 - 107702431 C e cerAty1.NW_012000820v1 1445537 0 - 10304083 C a score=97071.000000 s hg38.chr2_KI270774v1_alt 178127 15 + 223625 AGGTCCTCAGTGCCT s panTro5.chr2A 1474983 15 + 111504155 AGGTCCTCAGCGCCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1414119 15 + 114371477 AGGTCCTCAGCGCCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1437917 15 + 1464242 AGGTCCTCAGCGCCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1163117 15 + 81552678 AGGTCCTCAGTGCCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1490505 15 + 108979918 AGGTCCTCAGTGCCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1462926 15 - 111193037 AGGTCCTCAGTGCCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1491315 15 + 3644372 AGGTCCTCAGTGCCT i macNem1.NW_012011978v1 C 0 C 0 s manLeu1.NW_012103754v1 1018009 15 - 2200435 AGGTCCTCAGTGCCT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1438208 15 - 108792865 AGGTCCTCAGTGCCT i calJac3.chr14 T 71 C 0 s saiBol1.JH378218 1267283 15 - 7082604 AGGTCCTCAGTGCCT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1361043 15 + 1864846 AGGTCCTCAGTGCCT i cebCap1.NW_016107827v1 C 0 T 71 s aotNan1.NW_018513311v1 179739 4 + 287728 -----------GCCC i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90036130 15 - 120129022 ATGTCTCCGATGCCA i mm10.chr12 C 0 C 0 e otoGar3.GL873658 958278 0 + 5252280 C e dasNov3.JH576208 1786054 201 + 4416731 I e colAng1.NW_012118821v1 1448426 474 - 13651311 M e chlSab2.chr14 1525630 0 - 107702431 C e cerAty1.NW_012000820v1 1445537 0 - 10304083 C a score=165550.000000 s hg38.chr2_KI270774v1_alt 178142 29 + 223625 GCACCTGAGTGGTCCCGGGTGCT-GGGGGT s panTro5.chr2A 1474998 30 + 111504155 GCACCTGAGTGGTCCCGGGTGCTCGGGGGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1414134 30 + 114371477 GCACCTGAGTGGTCCCGGGTGCTCGGGGGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1437932 29 + 1464242 GCACCTGAGTGGTCCCGGGTGCT-GGGGGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1163132 30 + 81552678 GCACCTGAGTGGTCCCGGGTGCTCGGGGGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1490520 29 + 108979918 GCACCTGCGCGGCCCCGGGTGCT-GGGGGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1462941 29 - 111193037 GCACCTGCGCGGCCCCGGGTGCT-GGGGGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1491330 29 + 3644372 GCACCTGCGCGGCCCCGGGTGCT-GGGGGT i macNem1.NW_012011978v1 C 0 C 0 s manLeu1.NW_012103754v1 1018024 29 - 2200435 GCACCTGCGCGGCCCCGGGTGCT-GGGGGT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1438223 29 - 108792865 GCACCTGCGTGGCCCCAGGTGCT-GGGGCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1267298 29 - 7082604 GCACCTGCACGGCCCCGGGTGCT-CAGGAT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1360987 29 + 1864846 GCATCTGCGTGGCCCCGGGTGCT-GGGGGT i cebCap1.NW_016107827v1 T 71 C 0 s aotNan1.NW_018513311v1 179743 29 + 287728 GCACCTGCGTGGGCCCGGGTGCT-GGGGCT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 958278 9 + 5252280 ----------------GGAGGCA-AG---- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90036145 29 - 120129022 GATTCTCACAAGCCCTGCGTGCT-GTGGCT i mm10.chr12 C 0 I 62 e dasNov3.JH576208 1786054 201 + 4416731 I e colAng1.NW_012118821v1 1448426 474 - 13651311 M e chlSab2.chr14 1525630 0 - 107702431 C e cerAty1.NW_012000820v1 1445537 0 - 10304083 C a score=66641.000000 s hg38.chr2_KI270774v1_alt 178171 10 + 223625 CTGGGCAGAC s panTro5.chr2A 1475028 10 + 111504155 CTGGGCAGAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1414164 10 + 114371477 CTGGGCAGAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1437961 10 + 1464242 CTGGGCAGAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1163162 10 + 81552678 CTAGGCAGAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1490549 10 + 108979918 CTGGGCAGGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1462970 10 - 111193037 CTGGGCAGGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1491359 10 + 3644372 CTGGGCAGGC i macNem1.NW_012011978v1 C 0 C 0 s manLeu1.NW_012103754v1 1018053 10 - 2200435 CTGGGCAGGC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1438252 10 - 108792865 CTGGGCAGAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1267327 10 - 7082604 CTGGGCAGAA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1361016 10 + 1864846 CTGGGCAGAC i cebCap1.NW_016107827v1 C 0 I 322 s aotNan1.NW_018513311v1 179772 10 + 287728 CTGGGCAGAC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 958287 6 + 5252280 -TGGGCA--- i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90036174 62 - 120129022 I e dasNov3.JH576208 1786054 201 + 4416731 I e colAng1.NW_012118821v1 1448426 474 - 13651311 M e chlSab2.chr14 1525630 0 - 107702431 C e cerAty1.NW_012000820v1 1445537 0 - 10304083 C a score=7800.000000 s hg38.chr2_KI270774v1_alt 178181 1 + 223625 G s panTro5.chr2A 1475038 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1414174 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1437971 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1163172 1 + 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1490559 1 + 108979918 G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1462980 1 - 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1491369 1 + 3644372 G i macNem1.NW_012011978v1 C 0 C 0 s manLeu1.NW_012103754v1 1018063 1 - 2200435 G i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1438262 1 - 108792865 G i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1267337 1 - 7082604 G i saiBol1.JH378218 C 0 T 71 s cebCap1.NW_016107827v1 1361348 1 + 1864846 G i cebCap1.NW_016107827v1 I 322 C 0 s aotNan1.NW_018513311v1 179782 1 + 287728 G i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90036174 62 - 120129022 I e otoGar3.GL873658 958293 0 + 5252280 C e dasNov3.JH576208 1786054 201 + 4416731 I e colAng1.NW_012118821v1 1448426 474 - 13651311 M e chlSab2.chr14 1525630 0 - 107702431 C e cerAty1.NW_012000820v1 1445537 0 - 10304083 C a score=45785.000000 s hg38.chr2_KI270774v1_alt 178182 7 + 223625 CCACAGG s panTro5.chr2A 1475039 7 + 111504155 CCACAGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1414175 7 + 114371477 CCACAGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1437972 7 + 1464242 CCACAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1163173 7 + 81552678 CCACAGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1490560 7 + 108979918 CCGCAGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1462981 7 - 111193037 CCGCAGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1491370 7 + 3644372 CCGCAGG i macNem1.NW_012011978v1 C 0 C 0 s manLeu1.NW_012103754v1 1018064 7 - 2200435 CCGCAGG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1438263 7 - 108792865 CCACAGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1267267 7 - 7082604 CCACAGG i saiBol1.JH378218 T 71 C 0 s cebCap1.NW_016107827v1 1361349 7 + 1864846 CCACAGC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 179783 7 + 287728 CCACGGG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 958293 4 + 5252280 ---CAGG i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90036174 62 - 120129022 I e dasNov3.JH576208 1786054 201 + 4416731 I e colAng1.NW_012118821v1 1448426 474 - 13651311 M e chlSab2.chr14 1525630 0 - 107702431 C e cerAty1.NW_012000820v1 1445537 0 - 10304083 C a score=10035.000000 s hg38.chr2_KI270774v1_alt 178189 1 + 223625 G s panTro5.chr2A 1475046 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1414182 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1437979 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1163180 1 + 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1490567 1 + 108979918 G i rheMac8.chr13 C 0 T 71 s macFas5.chr13 1462988 1 - 111193037 G i macFas5.chr13 C 0 T 71 s macNem1.NW_012011978v1 1491377 1 + 3644372 G i macNem1.NW_012011978v1 C 0 T 71 s cerAty1.NW_012000820v1 1445537 1 - 10304083 G i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1525630 1 - 107702431 G i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1018071 1 - 2200435 G i manLeu1.NW_012103754v1 C 0 T 71 s calJac3.chr14 1438270 1 - 108792865 A i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1267274 1 - 7082604 G i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1361356 1 + 1864846 G i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 179790 1 + 287728 G i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 958297 1 + 5252280 G i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90036174 62 - 120129022 I e dasNov3.JH576208 1786054 201 + 4416731 I e colAng1.NW_012118821v1 1448426 474 - 13651311 M a score=309133.000000 s hg38.chr2_KI270774v1_alt 178190 36 + 223625 TCTCCTTCAGGTCCTCAGCGCCTGCACCTGTGTGGC s panTro5.chr2A 1475047 36 + 111504155 TCTCCTTCAGGTCCTCAGCGCCTGCACCTGTGTGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1414183 36 + 114371477 TCTCCTTCAGGTCCTCAGCGCCTGCACCTGTGTGGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1437980 36 + 1464242 TCTCCTTCAGGTCCTCAGCGCCTGCACCTGAGTGGT i gorGor5.CYUI01015607v1 C 0 I 282 s nomLeu3.chr19 1163181 36 + 81552678 TCTCCTTCAGGTCCTCAGCGCCTGCACCTGCGCGGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1490497 36 + 108979918 TCTCCTTCAGGTCCTCAGTGCCTGCACCTGCGCGGC i rheMac8.chr13 T 71 C 0 s macFas5.chr13 1462918 36 - 111193037 TCTCCTTCAGGTCCTCAGTGCCTGCACCTGCGCGGC i macFas5.chr13 T 71 C 0 s macNem1.NW_012011978v1 1491307 36 + 3644372 TCTCCTTCAGGTCCTCAGTGCCTGCACCTGCGCGGC i macNem1.NW_012011978v1 T 71 C 0 s cerAty1.NW_012000820v1 1445538 36 - 10304083 TCTCCTTCAGGTCCTCAGTGCCTGCACCTGCGCGGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1525631 36 - 107702431 TCTCCTTCAGCTCCTCAGTGCCTGCACCTGCGCGGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1018001 36 - 2200435 TCTCCTTCAGGTCCTCAGTGCCTGCACCTGCGCGGC i manLeu1.NW_012103754v1 T 71 C 0 s calJac3.chr14 1438271 36 - 108792865 TCTCCTTCAGGACCTTAGTGCCTGCACCTGTATGGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1267275 36 - 7082604 TCTCCTTCAGGTCCTCAGTGCCTGCACCTGCACGGC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1361357 36 + 1864846 TCTCCTTCAGGTCCTCAGCACCTGCACCTGCGTGGC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 179791 36 + 287728 TCTGCTTTAGTTCCTCAGTGCCTGCACCTGCGTGGG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 958298 11 + 5252280 ---------------CAGGACCGGCA---------- i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90036174 62 - 120129022 I e dasNov3.JH576208 1786054 201 + 4416731 I e colAng1.NW_012118821v1 1448426 474 - 13651311 M a score=216642.000000 s hg38.chr2_KI270774v1_alt 178226 25 + 223625 CCCGGGTGCTGGGGGTCTGGGCAGA s panTro5.chr2A 1475083 25 + 111504155 CCTGGGTGCTGGGTGTCTGGGCAGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1414219 25 + 114371477 CCTGGGTGCTGGGTGTCTGGGCAGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1438298 25 + 1464242 CCCGGGTGCTGGGGGTCTGGGCAGA i gorGor5.CYUI01015607v1 I 282 C 0 s nomLeu3.chr19 1163217 25 + 81552678 CCCGGGTGCTGGGAGTCTGGGCAGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1490533 25 + 108979918 CCCGGGTGCTGGGGGTCTGGGCAGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1462954 25 - 111193037 CCCGGGTGCTGGGGGTCTGGGCAGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1491343 25 + 3644372 CCCGGGTGCTGGGGGTCTGGGCAGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1445574 25 - 10304083 CCCGGGTGCTGAGGGTCTGGGCAGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1525667 25 - 107702431 CCCGGGTGCTGGGGGTCTGGGCAGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1018037 25 - 2200435 CCCGGGTGCTGGGGGTCTGGGCAGG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1438307 25 - 108792865 CCCGGGTGCTCAGGGTCTGGGCAGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1267311 25 - 7082604 CCCGGGTGCTCAGGATCTGGGCAGA i saiBol1.JH378218 C 0 I 2 s cebCap1.NW_016107827v1 1361393 25 + 1864846 CTTGGGTGCTCAGGGTCTGGGCAGA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 179827 25 + 287728 CCCGGGTCCTCAGGGTCTGGGCAGA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 958309 20 + 5252280 ----GGCATTCGGAGTGCGGGCTG- i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90036174 62 - 120129022 I e dasNov3.JH576208 1786054 201 + 4416731 I e colAng1.NW_012118821v1 1448426 474 - 13651311 M a score=17171.000000 s hg38.chr2_KI270774v1_alt 178251 3 + 223625 CGC s panTro5.chr2A 1475108 3 + 111504155 TGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1414244 3 + 114371477 CGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1438323 3 + 1464242 CGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1163242 3 + 81552678 CGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1490558 3 + 108979918 CGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1462979 3 - 111193037 CGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1491368 3 + 3644372 CGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1445599 3 - 10304083 CGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1525692 3 - 107702431 CGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1018062 3 - 2200435 CGC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1438332 3 - 108792865 AGT i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1361418 3 + 1864846 AGC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 179852 3 + 287728 AGC i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90036174 62 - 120129022 I e saiBol1.JH378218 1267336 2 - 7082604 I e otoGar3.GL873658 958329 0 + 5252280 C e dasNov3.JH576208 1786054 201 + 4416731 I e colAng1.NW_012118821v1 1448426 474 - 13651311 M a score=575820.000000 s hg38.chr2_KI270774v1_alt 178254 72 + 223625 CGCAGGAGAGGCTGGCAGCACACAGCTGTGGGCAGCTGGTCTTGAGTGCCTGCCCTGGGGGTTCT-CCATGCA s panTro5.chr2A 1475111 72 + 111504155 CGCAGGAGAGGGTGGCAGCACACAGCTGTAGGCAGCTGGTCCTGAGCGCCTGCCCTGGGGGTTCT-CCATGCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1414247 72 + 114371477 CGCAGGAGAGGGTGGCAGCACACAGCTGTAGGCAGCTGGTCCTGAGCGCCTGCCCTGGGGGTTCT-CCATGCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1438326 72 + 1464242 CGCAGGAGAGGCTGGCAGCACACAGCTGTGGGTGGCTGGTCCTGAGTGCCTGCCCTGGGGGTTCT-CCATGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1163245 72 + 81552678 CGCAGTAGAGGCTGGCAGCACACAGCAGTGGGCGGCTGGTCCTGAGTGCCTGCCCTGGGGGTTCT-CCATGCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1490561 72 + 108979918 CGCAGGGGAGGCCAGCAGCACACAGCAGTGGGTGGCTGGTCCTGAGTGCCTGCCCTGGGGGTTCT-CCAGGCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1462982 72 - 111193037 CGCAGGGGAGGCCAGCAGCACACAGCAGTGGGTGGCTGGTCCTGAGTGCCTGCCCTGGGGGTTCT-CCAGGCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1491371 72 + 3644372 CGCAGGGGAGGCCAGCAGCACACAGCAGTGGGTGGCTGGTCCTGAGTGCCTGCCCTGGGGGTTCT-CCAGGCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1445602 72 - 10304083 CGCAGGGGAGGCCAGCAGCACACAGCAGTGGGTGGCTGGTCCTGAGTGCCTGCCCTGGGGGTTCT-CCAGGCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1525695 72 - 107702431 CGCAGGGGAGGCCAGCAGCACACAGCAGTGGGTGGCTGGTCCTGAGTGCCTGCCCTGGGGGTTCT-CCAGGCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1018065 72 - 2200435 CGCAGGGGAGGCCAGCAGCACACAGCAGTGGGTGGCTGGTCCTGAGTGCCTGCCCTGGGGGTTCT-CCAGGCA i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1438335 70 - 108792865 -TCAGGGGAAGCCAGCGGACCACAGCAGTGGGTGCCTGGCCCTGAGCGCCTGCCCT-GGGGTTCT-CCATGCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1267338 71 - 7082604 CACAGGGGAGGCCCGCAGCACACAGCAGTGGGTGTCTGGCCCTGAGCACCTGCCCC-AGGGTTCT-CCATGCA i saiBol1.JH378218 I 2 C 0 s cebCap1.NW_016107827v1 1361421 70 + 1864846 -ACAGGGGAGGCCAGCGGCACACAGCAGTGGGTGCCTGGCCCTGAGCACCTGCCCC-GGGGTTCT-CCATGCA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 179855 70 + 287728 -GCAGGGGAGGCTAGCGGCACACAGCAGTGGGTGCCTGGCCCTGAGCGCCTGCCCC-GGGGTTCT-CCATGCA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 958329 42 + 5252280 ----GGTAGGGCCG--------------------------CCCGAGGGCCCGACCTGAGTCTGCTGCTATGT- i otoGar3.GL873658 C 0 C 0 e mm10.chr12 90036174 62 - 120129022 I e dasNov3.JH576208 1786054 201 + 4416731 I e colAng1.NW_012118821v1 1448426 474 - 13651311 M a score=10035.000000 s hg38.chr2_KI270774v1_alt 178326 1 + 223625 C s panTro5.chr2A 1475183 1 + 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1414319 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1438398 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1163317 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1490633 1 + 108979918 C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1463054 1 - 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1491443 1 + 3644372 C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1445674 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1525767 1 - 107702431 C i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1018137 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1438405 1 - 108792865 C i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1267409 1 - 7082604 C i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1361491 1 + 1864846 C i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 179925 1 + 287728 C i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1786255 1 + 4416731 T i dasNov3.JH576208 I 201 C 0 e mm10.chr12 90036174 62 - 120129022 I e otoGar3.GL873658 958371 0 + 5252280 C e colAng1.NW_012118821v1 1448426 474 - 13651311 M a score=92083.000000 s hg38.chr2_KI270774v1_alt 178327 14 + 223625 TGTGACCTTACTCA s panTro5.chr2A 1475184 14 + 111504155 CGTGACCTTACTCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1414320 14 + 114371477 CGTGACCTTACTCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1438399 14 + 1464242 CATGACCTTACTCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1163318 14 + 81552678 CATGACCTTACTCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1490634 14 + 108979918 CGTGAACTTACGCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1463055 14 - 111193037 CGTGAACTTACGCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1491444 14 + 3644372 CGTGAACTTACGCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1445675 14 - 10304083 CGTGAACTTACGCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1525768 14 - 107702431 CGTGAACTTACGCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1018138 14 - 2200435 CGTGAACTTATGCT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1438406 14 - 108792865 CATGACCTTATGCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1267410 14 - 7082604 CATGACCTTACGCG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1361492 14 + 1864846 CATGACCTTACGCG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 179926 14 + 287728 CATGATCTTACGCG i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90036236 14 - 120129022 TGCCACCCCACTCA i mm10.chr12 I 62 I 1 s dasNov3.JH576208 1786256 13 + 4416731 TCTTATCTTGCTC- i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 958371 0 + 5252280 C e colAng1.NW_012118821v1 1448426 474 - 13651311 M a score=3158987.000000 s hg38.chr2_KI270774v1_alt 178341 231 + 223625 CTGTCTCCTTCTCTGGAGGTTTTGGTGGGAGAACAGCCACGTCTTCACGGATGCACAGAGGCGTGAGCTGGAGAAGCACTCCCTGTCTCGGGTCATCTGTGACAACACTGGCCTCACCAGGGTGCCCATGGATGCCTTCCAAGTCGGCAAATTCCCCGAAGACTTTGAGTCTTGTGACAGCATCACTGGCATGAACCTGGAGGCCTGGAGGGAAACCTTTCCTCAAGGTGA s panTro5.chr2A 1475198 231 + 111504155 CTGTCTCCTTCTCTGGAGGTTTTGGTGGGAGAACAGCCACGTCTTCACGGATGCACAGAGGCGTGAGCTGGAGAAGCACTCCCTGTCTCGGGTCATCTGTGACAACACCGGCCTCACCAGGGTGCCCGTGGATGCCTTCCAAGTTGGCAAATTCCCCGAAGACTTTGAGTCTTGTGACAGCATCCCTGGCGTGAACCTGGAGGCCTGGAGGGAAACCTTTCCTCAAGGTGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1414334 231 + 114371477 CTGTCTCCTTCTCTGGAGGTTTTGGTGGGAGAACAGCCACGTCTTCACGGATGCACAGAGGCGTGAGCTGGAGAAGCACTCCCTGTCTCGGGTCATCTGTGACAACACCGGCCTCACCAGGGTGCCCGTGGATGCCTTCCAAGTTGGCAAATTCCCCGAAGACTTTGAGTCTTGTGACAGCATCCCTGGCGTGAACCTGGAGGCCTGGAGGGAAACCTTTCCTCAAGGTGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1438413 231 + 1464242 CTGTCTCCTTCTCTGGAGGTTTTGGTGGGAGAACAGCCGCATCTTCACGGATGCACAGAGGCGTGAGCTGGAGAAGCACTCCCTGTCTCGGGTCATCTGTGACAACACCGGCCTCACCAGGGTGCCCGTGGATGCCTTCCAAGTCGGCAAATTCCCCGAAGACTTTGAGTCTTGTGACAGCATCCCTGGCATGAACCTGGAGGCCTGGAGGGAAACCTTTCCTCAAGGTGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1163332 231 + 81552678 CTGTCTCCTTCTCTGGAGGTTTTGGTGGGAGAACAGCCACATCTTCACGGATGCTCAGAGGCGTGAGCTGGAGAAGCACTCCCTGTCTCGGGTCATCTGTGACAACACCGGCCTCACCAGGGTGCCCGTGGATGCCTTCCAAGTCGGAAAATTCCCTGAAGACTTTGAGTCTTGTGACAGCATCCCTGGCATGAACCTGGAGGCCTGGAGGGAAACCTTTCCTCAAGGTAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1490648 231 + 108979918 CTGTCTCCTTCCCTGGAGGTTTTGGTGGGAGAACAGCCACGTCTTCACGGACGCGCAGAGGCATGAGCTGGAGAAGCACTCCCTGTCTCGGGTCATCTGTGACAACACCGGCCTCACCAGGGTGCCCGTGGACGCCTTCCGAGTCGGAAAATTCCCTGAAGACTTTGAGTCTTGTGACAGCATCCCTGGCATGAACCTGGAGGCCTGGAGGGAGACCTTTCCTCAAGGTGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1463069 231 - 111193037 CTGTCTCCTTCCCTGGAGGTTTTGGTGGGAGAACAGCCACGTCTTCACGGATGCGCAGAGGCATGAGCTGGAGAAGCACTCCCTGTCTCGGGTCATCTGTGACAACACCGGCCTCACCAGGGTGCCCGTGGACGCCTTCCGAGTCGGAAAATTCCCTGAAGACTTTGAGTCTTGTGACAGCATCCCTGGCATGAACCTGGAGGCCTGGAGGGAGACCTTTCCTCAAGGTGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1491458 231 + 3644372 CTGTCTCCTTCCCTGGAGGTTTTGGTGGGAGAACAGCCACGTCTTCACGGACGCGCAGAGGCATGAGCTGGAGAAGCACTCCCTGTCTCGGGTCATCTGTGACAACACCGGCCTCACCAGGGTGCCCGTGGATGCCTTCCGAGTCGGAAAATTCCCTGAAGACTTTGAGTCTTGTGACAGCATCCCTGGCATGAACCTGGAGGCCTGGAGGGAGACCTTTCCTCAAGGTGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1445689 231 - 10304083 CTGTCTCCTTCCCTGGAGGTTTTGGTGGGAGAACAGCCACGTCTTCACGGACACGCAGAGGCATGAGCTGGAGAAGCACTCCCTGTCTCGGGTCATCTGTGACAACACCGGCCTCACCAGGGTGCCCGTGGACGCCTTCCGAGTCGGAAAATTCCCCGAAGACTTTGAGTCTTGTGACAGCATCCCTGGCATGAACCTGGAGGCCTGGAGGGAGACCTTTCCTCAAGGTGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1525782 231 - 107702431 CTGTCTCCGTCCCTGGAGGTTTTGGTGGGAGAACAGCCATGTCTTCACGGACGCGCAGAGGCATGAGCTGGAGAAGCACTCCCTGTCTCGGGTCATCTGTGACAACACCGGCCTCACCAGGGTGCCCACGGACGCCTTCCGATTCGGAAAATTCCCCGAAGACTTTGAGTCTTGTGACAGCATCCCTGGCATGAACCTGGAGGCCTGGAGGGAGACCTTTCCTCAAGGTGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1018152 231 - 2200435 CTGTCTCCTTCCCTGGAGGTTTTGGTGGGAGAACAGCCACGTCTTCACGGACACGCAGAGGCATGAGCTGGAGAAGCACTCCCTGTCTCGGGTCATCTGTGACAACACCGGCCTCACCAGGGTGCCCGTGGACGCCTTCCGAGTCGGAAAATTCCCCGAAGACTTTGAGTCTTGTGACAGCATCCCTGGCATGAACCTGGAGGCCTGGAGGGAGACCTTTCCTCAAGGTGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1448902 231 - 13651311 CTGTCTCCTTCCCTGGAGGTTTTGGTGGGAGAACAGCCACGTCTTCACGGACGCGCAGAGGCATGAGCTGGAGAAGCACTCCCTGTCTCGGGTCATCTGTGACAACACCGGCCTCGCCAGGGTGCCCGTGGACGCCTTCCAAGTCGGAAAATTCCCCGAAGACTTTGAGTCTTGTGACAGCATCCCCGGCCTGAACCTGGAGGCCTGGAGGGAGACCTTTCCTCAAGGTGA i colAng1.NW_012118821v1 M 474 C 0 s calJac3.chr14 1438420 231 - 108792865 CCATATCTGTCTCTGGAGGTTTTGGTGGGAGAACAGCCACGTCTTCACGGATGCACAGAGGCGTGAGCTGGAGAAGCACTCCCTGTCTCGGGTGATCTGCGACAACACCGGCCTCACCAGGGTGCCCGTCGATGCCTTCCAAGTCGGAAAATTCCCTGAAGACTTCCAGCCTTGCGACAGCATCCCTGGCATGAGCCTGGAGGCCTGGAGGGAGGCCTTCCCTCCAGGTGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1267424 231 - 7082604 CCATCTCTGTGTCTGGAGGTTTTGGTGGGAGAACAGCCACGTCTTCACGGATGCGCAGAGGCGTGAGCTGGAGAAGCACTCCCTGTCTCGGGTCATCTGCGACAACACCGGCCTCACCAGGGTGCCCGTCGATGCCTTCCAAGTTGGAAAATTCCCCGAAGACTTCCAGCCTTGCGACAGCATCCCTGGCCTGAGCCTGGAGGCCTGGAGGGAGGCCTTCCCTGCAGGTGA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1361506 231 + 1864846 CCATCTCTGTCTCTGGAGGTTTTGGTGGGAGAACAGCCACGTCTTCACGGATGCGCAGAGGCATGAGCTGGAGAAGCACTCCCTGTCTCGGGTCATCTGCGACAACACCGGCCTCACCAGGGTGCCTGTCGATGCCTTCCAAGTTGGAAAATTCCCCGAAGACTTCCAGCCTTGTGACAGCATCCCTGGCATGAGCCTGGAGGCTTGGAGGGAGGCCTTCCCTCCAGGTGA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 179940 231 + 287728 CCGTCTCTGTCTCTGGAGGTTTTGGTGGGAGAACAGCCACGTCTTCACGGATGCGCAGAGGCGTGAGCTGGAGAAGCACTCCCTGTCTCGCGTCATCTGCGACAACACTGGCCTCACCAGGGTGCCCGTCGACGCCTTCCAAGTCGGAAAACTCCCCGAAGACTTCCAGCCTTGCGACAGCATCCCTGGCATGAGCCTGGAGGCCTGGAGGGAGGCCTTCCCTCCAGGTGA i aotNan1.NW_018513311v1 C 0 I 13 s otoGar3.GL873658 958371 231 + 5252280 CTGTCTCTCTCCGTCCAGGTTCTGGTGGGAGAACAGGGGAGTCTTCACGGATGCACAGAGGCGTGAGCTGGAGAAGCACTCTCTGTCTCGGGTCATCTGTGACAACACAGGCCTCACCAGCATGCCTGTCAATGCCTTCCAAGTAGGAAAATTCCCCAAGGACTTTGAGTCCTGTGAGGACATCCCCAGCATGAACCTAGAGGTGTGGAGGGAGACCTTTCCTCAAGGTGA i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90036251 231 - 120129022 ATGCCTTCTCCTGTGTAGGTTTTGGTGGGAGAACACCAATGTCTTCACAGACGCTCAGAGGCAGGAACTAGAAAAGCATTCACTACCTCGGGTCATCTGTGACAACACTGGACTCACCAGAGTACCTGTGGATGCCTTCCGTATTGGAAAGTTCCCCCAAGACTTTGAATCCTGTGAGGACATCCCGAGCATGGACCTTGAACTATGGAGGGAGACCTTCCCACAAGGTAA i mm10.chr12 I 1 C 0 s dasNov3.JH576208 1786269 228 + 4416731 ---TCTCATTCTGTGGAGGTTTTGGTGGGAAAACAACCACATATTTACTGAAGCTCAAAGACATGAACTGGAAAAGCATTCTTTATCCCGAATAATCTGTGACAACAGTGGCCTCACCAGAGTGCCAGTTGATGCCTTTCAAGTTGGAAAATCTCCCCAAGACTTTGAATCATGTGAAAACATTCCAGGGATGAACTTGGACGTATGGCGGGAAATCTTTCATCAAGGTAA i dasNov3.JH576208 C 0 C 0 a score=352268.000000 s hg38.chr2_KI270774v1_alt 178572 51 + 223625 AGTTCGGTCTCCTCTCACACCACGTTACAGCACGTGCATCTCATCAAACAA s panTro5.chr2A 1475429 51 + 111504155 TGTTCGGTCTCTTCTCACACCACATTACAGCACGTGCATCTCATCAAACAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1414565 51 + 114371477 CGTTCGGTCTCTTCTCACACCACATTACAGCACGTGCATCTAATCAAACAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1438644 51 + 1464242 CGTTCGGTCTCTTCTCACACCACTTTACAGCACGTGCATCTCATCAAACAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1163563 51 + 81552678 TGTTTGGTCTCTTCTCACACCACGTTATAGCATGTGCATCTCATCAAACAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1490879 51 + 108979918 CGTTTGGTCTTTTCTCACACCACCTTACAGCACGTGCATCTCATCAAACAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1463300 51 - 111193037 CGTTTGGTCTTTTCTCACACCACCTTACAGCACGTGCATCTCATCAAACAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1491689 51 + 3644372 CGTTTGGTCTTTTCTCACACCACCTTACAGCACGTGCATCTCATCAAACAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1445920 51 - 10304083 CGTTTGGTCTCTTCTCACACCACCTTACAGCACGTGCATCTCATCAAACAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1526013 51 - 107702431 CGTTTGGTCTTTTCTCACACCACCTTACAGCACGTGCATCTCATCAAGCAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1018383 51 - 2200435 CGTTTGGTCTCTTCTCATACCACCTTACAGCACATGCATCTCATCAAACAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1449133 51 - 13651311 CGTTTGGTCTCTTCTCACACCACCTTACAGCACGTGCATCTCATCAAACAA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1438651 47 - 108792865 CATGTGGTCCCTTTTCAC---ACATTACAGCACGTGCAGCTCCACAAAGA- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1267655 50 - 7082604 CACATGGGCCCTCTTCACACAACATTACAGCACGTGCAGCTCAGCAAAGA- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1361737 50 + 1864846 TACGTGGTCCCTTTTCACATAACATTACAGCACGTGCAGCTCAGCAAAGA- i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 958602 46 + 5252280 --CCTGGCGCCCCTCTACCTGAACCCACAGTATG---AACTCCCCTAGGGG i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90036482 38 - 120129022 CTCCAAGCCTCTTGTTATTTTATCGTGT--CATTAACGTC----------- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1786497 51 + 4416731 AATTAAGCCTCttttaaaataataatataataCATAGGTTTAATGACAGAA i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 180171 13 + 287728 I a score=720536.000000 s hg38.chr2_KI270774v1_alt 178623 76 + 223625 AGCTTATCTTCCC-CAGGAG-CTGA-TT-TTAACTTTTCACTGTTTAGAAAATAGTGTCAACGCCCTGCCTTACACCCTC s panTro5.chr2A 1475480 76 + 111504155 AGCTTATCTTCCC-CAGGAG-CTGA-TT-TTAACTTTCCACTGTTTAGAAAATAGTGTCAACGCCCTGCCTTACACCCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1414616 76 + 114371477 AGCTTATCTTCCC-CAGGAG-CTGA-TT-TTAACTTTCCACTGTTTAGAAAATAGTGTCAACGCCCTGCCTTACACCCTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1438695 76 + 1464242 AGCTTATCTTCCC-CAGGAG-CTGA-TT-TTAACTTTCCACTGTTTAGAAAATAGTGTCAACGCCCTGCCTTACACCCTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1163614 76 + 81552678 AGCTTATCTTCCC-CAGGAG-CTGA-TT-TTAACTTTTCACTGTTTAGAAAACAGTGTCAACGCCCTGCCTTACACCCTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1490930 74 + 108979918 ACCTTGTCTTCCC-AAGGAG-CTGA-GT-TTAACTTTTCCCTGTTTAGAAAACAG--TCGACGCCCTGCCTTACACCCTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1463351 74 - 111193037 ACCTTGTCTTCCC-AAGGAG-CTGA-GT-TTAACTTTTCCCTGTTTAGAAAACAG--TCGACGCCCTGCCTTACACCCTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1491740 74 + 3644372 ACCTTGTCTTCCC-AAGGAG-CTGA-GT-TTAACTTTTCCCTGTTTAGAAAACAG--TCGATGCCCTGCCTTACACCCTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1445971 74 - 10304083 ACCTTGTCTTCCC-AAGGAG-CTGA-GT-TTAACTTTTCCCTGTTTAGAAAACAG--TCGACGCCCTGCCTTACACCCTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1526064 74 - 107702431 AGCTTGTCTTCCC-AAGGAG-CTGA-GT-TTAACTTTTCCCTGTTTAGAAAACAG--TCAACGCCCTGCCTTACACCCTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1018434 74 - 2200435 ACCTTGTCTTCCC-AAGGAG-CTGA-GT-TCAACTTTTCCCTGTTTAGAAAACAG--TCAACGCCCTGCCTTACACCCTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1449184 69 - 13651311 ACCTTGTCTTCCC-AAGGAG-CTGA-GT-T-ACCTTTTCACTGTTTAGAAAACAG------CGCCCTGCCTTACACCCTC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1438698 76 - 108792865 AGCTTGTCTTCCC-AAGGAG-CTGA-TT-TTATCTTTTCACTGTTTAGAAAATAGTGTCAGTGCCCTGCCTTACACCCTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1267705 75 - 7082604 AGCTTGTCTTCCC-AGGGAG-CTGA-TT-CTACCTTTCCGCTGTTTAG-AAACAGTGTCAGTGCCCTGCCTGACACCCTC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1361787 77 + 1864846 AGCTTGTCTTCCC-AAGGAG-CTGATTT-TTACCTTTTCACTGTTTAGAAAATAGTGTCAGTGCCCTGCCTTACACCCTC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 180184 74 + 287728 AGCTTGTCTTCCC-AAGGAA-CCGA-TT-TTACCTTTTCCCTGTTTAG--AATAGTGTCAGCGCCCTGCCTTACACCCTC i aotNan1.NW_018513311v1 I 13 C 0 s otoGar3.GL873658 958648 76 + 5252280 AGAGCATCCTCCC-AGGGGT-GGCC-TT-TAGACCCTGAGCAGCTTAGAAAAGGGCACCAGTGCCCTGCCCTGCATGCCC i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90036520 77 - 120129022 AGTTTAACCTCTC-AAAGAGACCGA-TT-TTAAACCTGCCCTGCTGAGAAAGCACCGGCAAGACTGAGCCTTGTCTTCTC i mm10.chr12 C 0 I 7560 s dasNov3.JH576208 1786548 75 + 4416731 AGCATAACTTCTCAAAGGAG-TTGA-TTCTTAATAAGGCCCATTTGAGAAAACA---TAAAAAACGATGCTTATATTCTC i dasNov3.JH576208 C 0 C 0 a score=513507.000000 s hg38.chr2_KI270774v1_alt 178699 75 + 223625 AGGGCAGCTCC------------------Tggggcggggcggggcggggcggggc-----CCTTCTCT----AGTGAGAAAGG-----AACTGGAGGCCTAGAGAAA s panTro5.chr2A 1475556 80 + 111504155 AGGGCAGCTCC------------------TggggcggggcggggcggggcggggcggggcCCTTCTCT----AGTGAGAAAGG-----AACTGGAGGCCTAGAGAAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1414692 65 + 114371477 AGGGCAGCTCC------------------TGGGGCGGGGCGGGGC---------------CCTTCTCT----AGTGAGAAAGG-----AACTGGAGGCCTAGAGAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1438771 75 + 1464242 AGGGCAGCTCC------------------TGGGGAGGGGCGGGGAGGGGCGGGGC-----CCTTCTCT----AGTGAGAAAGG-----AACTGGAGGCCTAGAGAAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1163690 65 + 81552678 AGGGCAGCTCC------------------CGGGGCGGGGCGGGAC---------------CCTTCTCT----AGTGAGAAAGG-----AACTGGAGGCCTAGAGAAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1491004 64 + 108979918 AGGGCAGCTCC------------------CGGGGC-GGGCGGGAC---------------CCTTCTCT----AGTGAGACAGG-----AACTGGGGGCCTAGAAAAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1463425 64 - 111193037 AGGGCAGCTCC------------------CAGGGC-GGGCGGGAC---------------CCTTCTCT----AGTGAGACAGG-----AACTGGGGGCCTAGAAAAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1491814 64 + 3644372 AGGGCAGCTCC------------------CGGGGC-GGGCGGGAC---------------CCTCCTCT----AGTGAGACAGG-----AACTGGGGGCCTAGAAAAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1446045 64 - 10304083 AGGGCAGCTCC------------------CGGGGC-GGGCGGGAC---------------CCTTCTCT----AGTGAGACAGG-----AACTGGGGGCCTAGAAAAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1526138 64 - 107702431 AGGGCAGCTCC------------------CGGGGC-GGGCGGGAC---------------CCTTCTCT----AGTGAGAAAGG-----AACTGGGGGCCTAGAAAGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1018508 64 - 2200435 AGGGCAGCTCC------------------CGGGGC-GGGCGGGAC---------------CCTTCTCT----AGTGAGACAGG-----AACTGGGGGCCTAGAAAAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1449253 64 - 13651311 AGGGCAGCTCC------------------CGGGGC-GGGCGGGAC---------------CCTTCTCT----AGTGAGAAAGG-----AACTGGGGGCCTAGAAAAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1438774 62 - 108792865 AGGGCAGCTCA------------------TGGGGTGGGGCCGGGC---------------CCTTCTCT----AGTAAGAAAGG-----AACTGGAGGCCTAGAA--- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1267780 62 - 7082604 AGGGCAGCTCA------------------TGGGGTGGGGCCGGGC---------------CCTTCCCT----AGTAAGAAAGG-----AACTGGAGGCCTAGAA--- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1361864 61 + 1864846 AGGACAGCTCA------------------TGGGGTGGGG-CAGGC---------------CCTTCACT----AGTAAGAAAGG-----AACTGGAGGCCTAGAA--- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 180258 62 + 287728 AGGGCAGCTCG------------------TGGGGTGGGGCCGGGC---------------CCTTCTCT----AGTACGAAAGG-----AACTGGAGGCCTAGAA--- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 958724 62 + 5252280 TGG--AGGCCA------------------TGGTGT-GGCCACAGC---------------C--TATGA----AGTGAGGAAGTTACTCAGCTAAGTCCCTGGAA--- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1786623 87 + 4416731 AAGGGTGCTACGTTAACATGGTTGCAATATGGTGTTTCCTGAGTG---------------CCTCCTCCTCAAAGGGAGAAGGA-----ATTTGGAAGTCTGGGAAAA i dasNov3.JH576208 C 0 I 2291 e mm10.chr12 90036597 7560 - 120129022 I a score=546125.000000 s hg38.chr2_KI270774v1_alt 178774 72 + 223625 GGGAGCCCGCGGGGCCCGATCTGGGAAGAGGCCGTGTGTGCTGCGTGGGTGCTCAGTGAGTGACCACAGCAG s panTro5.chr2A 1475636 72 + 111504155 GGGAGCCCGCGGGGCCCGATCTGGGAAGAGGCCGTGTGTGCTGCGTGGGTGCTCAGTGAGTGACCACAGCAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1414757 72 + 114371477 GGGAGCCCGTGGGGCCCGATCTGGGAAGAGGCCGTGTGTGCTGCGTGGGTGCTCAGTGAGTGACCACAGCAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1438846 71 + 1464242 GGGAGCCAGCCGGG-CCGACCTGGGAAGAGGCCGTGTGTGCTGCATGGGTGCTCAGTGAGTGACCACAGCAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1163755 72 + 81552678 GGGAGCCAGCGGGGCCCGACCTGGGAAGTGGCCGTGTGTGCTGCGTGGGTGCTCAGTGACTGACCACAGCAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1491068 72 + 108979918 GGGAGCCAGCGGGGCCCGACCTGGGAAGTGACGGTGTGTGCTGCATGGGTGCTGAGTGAGTGACCACAGCAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1463489 72 - 111193037 GGGAGCCAGCGGGGCCCGACCTGGGAAGTGACGGTGTGTGCTGCGTGGGTGCTGAGTGAGTGACCACAGCAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1491878 72 + 3644372 GGGATCCAGCGGGGCCCGACCTGGGAAGTGACGGTGTGTGCTGCGTGGGTGCTGAGTGAGTGACCACAGCAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1446109 72 - 10304083 GGGAGCCAGCGGGGCCCGACCTGGGAAGTGACAGTGTGTGCTGCGTGGGTGCTGAGTGAGTGACCACAGCAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1526202 71 - 107702431 GGGAG-CAGCGGGGCCCGACCTGGGAAGTGACGGTGTGTGCTGTGTGGGTGCTGAGTGAGTGACCACAGCAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1018572 69 - 2200435 GGGAGCCAGCGGGGCCCAACCTGGGAAGTGACGGTGTGTGCTGCGTGGTTGCTGAGTGAGTGACCA---CAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1449317 68 - 13651311 GGGAGCCAGCGGGGCCCGACCTGGGAAGCGACCGTGTGTGCTGTGTGGGTGC----TCAGTGACCACAACAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1438836 66 - 108792865 GTGAGCCTTTGGGG-CCGACCTGGGAAACGGTG----GTGGTGTGTGGGTGCCCAGCGAGTGACCACAGCA- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1267842 71 - 7082604 GTGAGCCTTTGGGG-CGGACCTGGGAAACGGCAGGGCGTGTGGTGCGGGTGCCCGGCGAGTGCCCACAGCAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1361925 70 + 1864846 GTGAGCCTTTGAGG-CCGACCTGGGAAACAGCAGTGGGTATTGTGTGGGTG-CCAGTGAGCGACCACTGCAG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 180320 67 + 287728 GTGAGCCTTTGGGG-CCGACCTGGGAAACGGTG----GTGTTGTGTGGGTGCCCAGCGAGTGACCACAGCAG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 958786 57 + 5252280 AGGTGCTCAGGGGGCCC--TCTG--------CTGTGGGGTCTGTGTAG-TGCTCTGGGGGT----ACAGCAG i otoGar3.GL873658 C 0 I 640 e mm10.chr12 90036597 7560 - 120129022 I e dasNov3.JH576208 1786710 2291 + 4416731 I a score=263047.000000 s hg38.chr2_KI270774v1_alt 178846 30 + 223625 GGCTCCCCGGCCCTGGCACCAG-CCCCTCCA s panTro5.chr2A 1475708 30 + 111504155 GGCTCCCTGGCCTTGGCACCAG-CCCCTCCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1414829 30 + 114371477 GGCTCCCTGGCCTTGGCACCAG-CCCCTCCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1438917 30 + 1464242 GGCTCCCCGGCCTTGGCACCAG-CCCCTCCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1163827 30 + 81552678 GGCTCCCCGGCCTCGGCACCAG-CCCCTCCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1491140 30 + 108979918 GGCTCCCCAGCCTCGGCACCAG-CCCCTCCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1463561 30 - 111193037 GGCTCCCCAGCCTCGGCACCAG-CCCCTCCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1491950 30 + 3644372 GGCTCCCCAGCCTCGGCACCAG-CCCCTCCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1446181 30 - 10304083 GGCTCCCCAACCTCGGCACCAG-CCCCTCCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1526273 30 - 107702431 GGCTCTCCAGCCTCGGCACCAG-CCCCTCCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1018641 30 - 2200435 GGCTCCCCAGCCTCGGCACCAG-CCCCTCCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1449385 30 - 13651311 GGCTCCCCAGCCTCAGCACCAG-CCCCTCCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1438902 30 - 108792865 GGCTCCCCA-CCTCAGCATCAGCCCCCTCCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1267913 30 - 7082604 GGCTCCCCA-CCTCGGGATCGGCCCCCTCCA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1361995 30 + 1864846 GGCTCCCTA-CCTCGGGATCAGCCCCCTCCA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 180387 30 + 287728 GGCTCCCCA-CCTCGGCGTCAGCCCCCTCCA i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90036597 7560 - 120129022 I e otoGar3.GL873658 958843 640 + 5252280 I e dasNov3.JH576208 1786710 2291 + 4416731 I a score=13600.000000 s hg38.chr2_KI270774v1_alt 178876 1 + 223625 G s panTro5.chr2A 1475738 1 + 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1414859 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1438947 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1163857 1 + 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1491170 1 + 108979918 G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1463591 1 - 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1491980 1 + 3644372 G i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1446211 1 - 10304083 G i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1526303 1 - 107702431 G i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1018671 1 - 2200435 G i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1449415 1 - 13651311 G i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1438932 1 - 108792865 G i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1267943 1 - 7082604 G i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1362025 1 + 1864846 G i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 180417 1 + 287728 G i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 959483 1 + 5252280 G i otoGar3.GL873658 I 640 C 0 e mm10.chr12 90036597 7560 - 120129022 I e dasNov3.JH576208 1786710 2291 + 4416731 I a score=555685.000000 s hg38.chr2_KI270774v1_alt 178877 56 + 223625 GGCACAAGCGCACCCGTGACAGGGACGTTGGTGTGTGGTTTTCTTTTCTCGTAGTT s panTro5.chr2A 1475739 56 + 111504155 GGCACAAGCGCACCCGTGACAGGGACGTTGGTGTGTGGTTTTCTTTTCTCGTAGTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1414860 56 + 114371477 GGCACAAGCGCACCCGTGACAGGGACGTTGGTGTGTGGTTTTCTTTTCTCGTAGTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1438948 56 + 1464242 GGCACAAGCGCACCCGTGACAGGGACGTCGGTGTCTGGTTTTCTTTTCTCATAGTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1163858 55 + 81552678 GGCACAAGCGCA-CCGTGACAGGGACGTTGGTGTGTGGTTTTCTTTTCTCGTAGTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1491171 56 + 108979918 GGCACAAGTGTGCCCGTGACAGGGACGTTGGTATGTGGTTTTCTTTTCTCGCAGTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1463592 56 - 111193037 GGCACAAGTGTGCCCGTGACAGGGACGTTGGTATGTGGTTTTCTTTTCTCGCAGTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1491981 56 + 3644372 GGCACAAGTGTGCCCGTGACAGGGACGTTGGTATGTGGTTTTCTTTTCTCGCAGTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1446212 56 - 10304083 GGCACAAGTGTGCCCGTGACAGGGACGTTGGTATGTGGTTTTCTTTTCTCGCAGTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1526304 56 - 107702431 GGCACAAGTGTGCCCGTGACAGGGACGTTGGTATGTGGTTTTCTTTTCTCGTAGTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1018672 56 - 2200435 GGCACAAGTGTGCCCGTGACAGGGACGTTGGTATGTGGTTTTCTTTTCTCGCAGTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1449416 56 - 13651311 GGCACAAGTGTGCCCATGACAGGGACGTTGGTATGTGGTTTTCTTTTCTCGTAGTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1438933 54 - 108792865 GGCACAGGTGCGCCTGTGACGGGGACATTGGCGTGTGG--CTCTTCCCTCTCAGTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1267944 54 - 7082604 GGCACAGGTGCACCTATGATGGGGACATTGGCGTGTGG--TTCTTTCCTCGCAGTC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1362026 54 + 1864846 GGCACAGGCGCGCCTATGACGGGGACATTGGCATGTGG--TTCTTTCCTCGCAGTT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 180418 54 + 287728 GGCACAGGTGCGCCTATGACGGGGACATTGGCGTGTGG--TTCTTTTCTCGCAGTT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 959484 55 + 5252280 GACACAACTCAGCCCGTGACCAGGACATTGGAGTGAGGTTTTCTGTCCCAGT-GTC i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90044157 56 - 120129022 GGTGCAACTCTGCCCACAGTAGGGCTGGTGGTCTAGAGTCTTTCTTTCTGGTGGCC i mm10.chr12 I 7560 C 0 e dasNov3.JH576208 1786710 2291 + 4416731 I a score=6095645.000000 s hg38.chr2_KI270774v1_alt 178933 568 + 223625 TGACTACATGTCAACCTGTCCACATTTCATAGACGACAAGTGTGGCTTCCCAGAGAGCGTGGAGAATGGGGACTTTGTGCACTGTGAGGAGTCTGGGAGGCGCGTGCTGGTGTATTCCTGCCGGCACGGGTATGAGCTCCAAGGCCGGGAGCAGCTCACTTGCACCCAGGAAGGATGGGATTTCCAGCCTCCCCTCTGCAAAGGTCAGTCCT------------------TTCTTCAATGAC--AATTACAAAAC----ATCTGAATGTTTCCGATATAAGTTAACAATGCAATGTCA-----TTGA----AAATTTCTTCGCCAAAAGGTGCTTCTGA----A-ACTGTTATCTTCCCAGGAGCAATCTGGGGATAGAAAGC-AAGGGCTCTCCCCTTGGCTGGCCATGTTCC-----CAGCTGGCCT-TT-TTCTAGG-----TAGTGAGGCCTCAGGACAG-GCACGTGGAATCGTGA-CCAATGGGGTCACCGGTGAGGGAAGAGAGAGGGGAGTCCGTGAGTTC-CAGGCAAAGTT----GTG---G--TGAACTCGCAGGGGCGCTTTCTCAAA-GGGAACACAGCA----GCAAACGTCTC-CACTCCAGG---AACCCATAGAGTAAGGCTC s panTro5.chr2A 1475795 569 + 111504155 TGACTACATGTCAACCTGTCCACATTTCATAGATGACAAGTGTGGCTTCCCAGAGAGCGTGGAGAATGGGGACTTTGTGCACTGTGAGGAGTCTGGGAGGCGCGTGCTGGTGTATTCCTGCCGGCACGGGTATGAGCTCCAAGGCCGGGAGCAGCTCACTTGCACCCAGGAAGGATGGGATTTCCAGCCTCCCCTCTGCAAAGGTCAGTCCT------------------TTCTTCAATGAT--AATTACAAAAC----ATCTGCATGTTTCCGATATAAATTAACAATGCAATGTCA-----TTGA----AAATTTCTTCGCCAAAAGGTGCTTCTGA----A-ACTGTTATCTTCCCAGGAGCAATTTGGGGATAGAAAGC-AAGGGCTCTCCCCTTGGCTGGCCATGTTCC-----CAGCTGGCCTCTT-TTCTAGG-----TAGTGAGGCCTCAGGACAG-GCACGTGGAATCGTGA-CCAATGGGGTCACCGGTGAGGGAAGAGAGAGGGGAGTCCATGAGTTC-CAGGCAAAGTT----GTG---G--TGAACTCGCAGGGGCGCTTTCTCAAA-GGGAACACAGCA----GCAAACGTCTC-CACTCCAGT---AACCCATAGAGTAAGGCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1414916 568 + 114371477 TGACTACATGTCAACCTGTCCACATTTCATAGATGACAAGTGTGGCTTCCCAGAGAGCGTGGAGAATGGGGACTTTGTGCACTGTGAGGAGTCTGGGAGGCGCGTGCTGGTGTATTCCTGCCGGCACGGGTATGAGCTCCAAGGCCGGGAGCAGCTCACTTGCACCCAGGAAGGATGGGATTTCCAGCCTCCCCTCTGCAAAGGTCAGTCCT------------------TTCTTCAATGAT--AATTACAAAAC----ATCTGCATGTTTCCGATATAAATTAACAATGCAATGTCA-----TTGA----AAATTTCTTCGCCAAAAGGTGCTTCTGA----A-ACTGTTATCTTCCCAGGAGCAATTTGGGGATAGAAAGC-AAGGGCTCTCCCCTTGGCTGGCCATGTTCC-----CAGCTGGCCT-CT-TTCTAGG-----TAGTGAGGCCTCAGGACAG-GCACGTGGAATCGTGA-CCAATGGGGTCACCGGTGAGGGAAGAGAGAGGGGAGTCCATGAGTTC-CAGGCAAAGTT----GTG---G--TGAACTCGCAGGGGCGCTTTCTCAAA-GGGAACACAGCA----GCAAACGTCTC-CATTCCAGT---AACCCATAGAGTAAGGCTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1439004 568 + 1464242 TGACTACATGTCAACCTGTCCACATTTCATAGACGACAAGTGTGGCTTCCCAGAGAGCGTGGAGAATGGGGACTTTGTACACTGTGAGGAGTCTGGGAGGCGCGTGCTGGTGTATTCCTGCCGGCACGGGTATGAGCTCCAAGGCCGGGAGCAGCTCACTTGCACCCAGGAAGGATGGGATTTCCAGCCTCCCCTCTGCAAAGGTCAGTCCT------------------TTCTTCAATGAC--AATTACAAAAC----ATCTGAATGTTTCTGATATAAGTTAACAATGCAATGTCA-----TTGA----AAATTTCTTCGCCAAAAGGTGCTTCTGA----A-ACTGTTATCTTCCCAGGAGCAATTTGGGGATAGAAAGC-AAGGGCTCTCCCCTTGGCTGGCCATGTTCC-----CAGCTGGCCT-CT-TTCTAGG-----TAGTGAGGCCTCAGGACAG-GTACGTGGAATCGTGA-CCAATGGGGTCACCGGTGAGGGAAGAGAGAGGGGAGTCCGTGAGTTC-CAGGCAAAGTT----GTG---G--TGAACTCGCAGGGGCGCTTTCTCAAA-GGGAACACAGCA----GCAAACGTCTC-CACTCCAGG---AACCCATAGAGTAAGGCTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1163913 561 + 81552678 TGACTACATGTCAAACTGTCCACATTTCATAGACGACAAGTGTGGCTTCCCGGAGAGCGTGGAGAATGGAGACTTTGTGCACTGTGAGGAGTCTGGGAGGCGCGTGCTGGTGTATTCCTGCCGGCACGGGTATGAGCTCCAAGGCCAGGAGCAGCTCACCTGCACCCAGGAAGGATGGGATTTCCAGCCTCCCCTCTGCAAAGGTCAGTCCT------------------TCCTTTAATGAC--AATTACAAAAC----ATCTGCATGTTTCTCATATAAATTAACAATGCAATGTCA-----TTGA----AAGTTTCTTCGCCAAAAGGTGCTTCCGA----A-ACTGTTATCTTCCCAGGAGCGATTTGAGGATAGAAAGC-AAGGGCTCTCCCCT----TGGCCATGTTCC-----CAGCGGGCCT-CT-TTCTAGG-----TAGTGAGGCCTCAGGACAG-GCACATGGAATCGTG--CCAATGGGGTCACCGGTGAGGGAAGAGAGA--GGAGTCCGTGAGTTC-CAGGCAAAGTT----GGG---G--TGAACTCGCAGGGGCGCTTTCTCAAA-GGGAACACAGCA----GCAAACATCTC-CACTCCAGG---AACCCATAGAGTAAGGCTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1491227 568 + 108979918 TGACTACATGTAAACCTGTCCACATTTCACAGACGACAAGTGTGGCTTCCCAGAGAGCGTGGAGAATGGGGACTTTGTGCACTGTGAGGAGTCTGGGAGGCGTGTGCTGGTGTATTCCTGCCGGCACGGGTATGAGCTCCAAGGCCACGAGCAACTCACTTGCACCCAGGAAGGATGGGATTTCCAGCCTCCGCTCTGCAAAGGTCAGTTCT------------------TTCTTCAATAAC--AATTACAAAAC----ATCTGCATGTTTCCGATATAAATTAACAACGCAATGTCA-----TTGA----AAATTTATTCGCCAAAAGATGCTTCTGA----A-ACTGTTATCTTCCCAGCAGCAATTTGGGGGTAGGAAGC-AAGGGCTCTCCCTTTGGCTGGCCGTGTTCC-----CAGCTGGCCT-CT-TTCTAGG-----TGGTGAGGCCTCAGAATAG-GCACGTGGAATCGTGA-CCAATGGGGTCACCTGTGAGGGAAGAGAGAGAGGAGTTCATGAGTTC-CAGGCAAAGTT----GTG---G--TGAACTTGCAGGGCCACTTTCTCAAA-GGAAACACGGCA----GCAAACGTCTC-CACTCCAGG---AACCCATAGAGTTAGTCCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1463648 568 - 111193037 TGACTACATGTAAACCTGTCCACATTTCACAGACGACAAGTGTGGCTTCCCAGAGAGCGTGGAGAATGGGGACTTTGTGCACTGTGAGGAGTCTGGGAGGCGCGTGCTGGTGTATTCCTGCCGGCACGGGTATGAGCTCCAAGGCCACGAGCAACTCACTTGCACCCAGGAAGGATGGGATTTCCAGCCTCCGCTCTGCAAAGGTCAGTTCT------------------TTCTTCAATAAC--AATTACAAAAC----ATCTGCATGTTTCCGATATAAATTAACAACGCAATGTCA-----TTGA----AAATTTATTCGCCAAAAGATGCTTCTGA----A-ACTGTTATCTTCCCAGCAGCAATTTGGGGGTAGGAAGC-AAGGGCTCTCCCTTTGGCTGGCCGTGTTCC-----CAGCTGGCCT-CT-TTCTAGG-----TGGTGAGGCCTCAGAATAG-GCACGTGGAATCGTGA-CCAATGGGGTCACCTGTGAGGGAAGAGAGAGAGGAGTTCATGAGTTC-CAGGCAAAGTT----GTG---G--TGAACTTGCAGGGCCACTTTCTCAAA-GGAAACACGGCA----GCAAACGTCTC-CACTCCAGG---AACCCATAGAGTTAGTCCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1492037 569 + 3644372 TGACTACATGTAAACCTGTCCACATTTCACAGACGACAAGTGTGGCTTCCCAGAGAGCGTGGAGAATGGGGACTTTGTGCACTGTGAGGAGTCTGGGAGGCGTGTGCTGGTGTATTCCTGCCGGCACGGGTATGAGCTCCAAGGCCACGAGCAACTCACTTGCACCCAGGAAGGATGGGATTTCCAGCCTCCGCTCTGCAAAGGTCAGTTCT------------------TTCTTCAATAAC--AATTACAAAAC----ATCTGCATGTTTCCGATATAAATTAACAACGCAATGTCA-----TTGA----AAATTTATTCGCCAAAAGATGCTTCTGA----A-ACTGTTATCTTCCCAGCAGCAATTTGGGGGTAGGAAGC-AAGGGCTCTCCCTTTGGCTGGCCGTGTTCC-----CAGCTGGCCT-CTATTCTAGG-----TGGTGAGGCCTCAGAATAG-GCACGTGGAATCGTGA-CCAATGGGGTCACCTGTGAGGGAAGAGAGAGAGGAGTTCATGAGTTC-CAGGCAAAGTT----GTG---G--TGAACTTGCAGGGCCACTTTCTCAAA-GGAAATACGGCA----GCAAACGTCTC-CACTCCAGG---AACCCATAGAGTTAGTCCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1446268 564 - 10304083 TGACTACATGTCAACCTGTCCACATTTCACAGACGACAAGTGTGGCTTCCCAGAGAGCGTGGAGAATGGGGACTTTGTGCACTGTGAGGAGTCTGGGAGGCGCGTGCTGGTGTATTCCTGCCGGCACGGGTATGAGCTCCAAGGCCACGAGCAACTCACTTGCACCCAGGAAGGATGGGATTTCCAGCCTCCGCTCTGCAAAGGTCAGTTCT------------------TTCTTCAATAAC--AATTACAAAAC----ATCTGCATGTTTCCGATATAAATGAACAACGCAACGTCA-----TTGA----AAATTTATTCGCCAAAAGATGCTTCTGA----A-ACTGTTATCTTCCCAGCAGCAATTTGGGGATAGGAAGC-AAGGGCTCTCCCTT----TGGCCGTGTTCC-----CAGCTGGCCT-CT-TTCTAGG-----TAGTGAGGCCTCAGAATAG-GCACGTGGAATCGTGA-CCAATGGGGTCACCTGTGAGGGAAGAGAGAGGGGAGTTCATGAGTTC-CAGGCAAAGTT----GTG---G--TGAACTCACAGGGCCACTTTCTCAAA-GGAAACACGGCA----GCAAACGTCTC-CACTCCAGG---AACCCATAGAGTTAGTCCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1526360 564 - 107702431 TGACTACATGTCAACCTGTCCACATTTCACA---GACAAGTGTGGCTTCCCAGAGAGCGTGGAGAACGGGGACTTTGTGCACTGCGAGGAGTCTGGGAGGCGCGTGCTGGTGTATTCCTGCCGGCACGGGTATGAGCTCCAAGGCCACGAGCAACTCACTTGCACCCAGGAAGGATGGGATTTCCAGCCCCCGCTCTGCAAAGGTCAGTCCT------------------TCCTTCAATAAC--AATTACAAAAC----ATCTGCATGTTTCCGATATAAATTAACAATGCAGTGTCA-----TTGA----AAATTTATTCGCTAAGAGATGCTTCTGA----A-ACTGTTATCATCCCAGGAGC-ATTTGGGGATAGAAAGC-AAGGGCTCTCCCCCTGGCTGGCCATATTCC-----CAGCTGGCCT-CT-TTCTAGG-----TAGTGAGGCCTCAGAATAG-GCACGTGGAATCGTGA-CCAATGGGGTCACCTGTGAGGGAAGAGAGAGAGGAATTCATGAGTTC-CAGGCAAAGTT----GTG---G--TGAACTCGCAGGGCCACTTTCTCAAA-GGAAATACGGCA----GCAAACATCTC-CACTCCAGG---AACCCATAGAGTTAGTCCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1018728 568 - 2200435 TGACTACATGTCAACCTGTCCACATTTCACAGATGACAAGTGTGGCTTCCCAGAGAGCGTGGAGAATGGGGACTTTGTGCACTGTGAGGAGTCTGGGAGGCGCGTGCTGGTGTATTCCTGCCGGCACGGGTATGAGCTCCAAGGCCACGAGCAACTCACTTGCACCCAGGAAGGATGGGATTTCCAGCCTCCGCTCTGCAAAGGTCAGTTCT------------------TTCTTCAATAAC--AATTACAAAAC----ATCTGCATGTTTCCGATATAAATTAACAATGCAACGTCA-----TTGA----AAATTTATTCGCCAAAAGATGCTTCTGA----A-ACTGTTATCTTCCCAGCAGCAATTTGGGGATAGGAAGC-AAGGGCTCTCCCTTTGGCTGGCCGTGTTCC-----CAGCTGGCCT-CT-TTCTAGG-----TAGTGAGGCCTCAGAATAG-GCACGTGGAATCGTGA-CCAGTGGGGTCACCTGTGAGGGAAGAGAGAGGGGAGTTCATGAGTTC-CAGGCAAAGTT----GTG---G--TGAACTCGCAGGGCCACTTTCTCAAA-GGAAACACGGCA----GCAAACGTCTC-CACTGCAGG---AACCCATAGAGTTAGTCCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1449472 568 - 13651311 TGACTACATGTCAACCTGTCCACATTTCATAGACGACAAGTGTGGCTTCCCAGAAAGCGTGGAGAACGGGGACTTTGTGCACTGTGAGGAGTCTGGGAGGCGCGTGCTGGTGTATTCCTGCCGGCACGGGTATGAGCTCCAAGGCCACGAGCAACTCACTTGCACCCAGGAAGGATGGGATTTCCAGCCTCCCCTCTGCAAAGGTCAGTCCT------------------TTCTTCAATAAC--AATTACAAAAC----ACCTGCATGTTTCCGATATAAATTAACAATGCAATGTCA-----TTGA----AAATTTATTCGCCAAAAGATGCTTCTGA----A-ACTGTTATCTTCCCAGGAGCAATTTGGGGATAGAAAGC-AAGGGCTCTCCCCTGGGCTGGCCATATTCC-----CAGCTGGCCT-CG-TTCTAGG-----TAGTGAGGCCTCGGAATAG-GCACGTGGAATCGTGA-CCAATGGGGTTACCTGTGAGGGAAGAGAGAGAGGAGTTCATGAGTTC-CAGGCAAAGTT----GTG---G--TGAACTCGCAGCGCCACTTTCTCAAA-GGAAACACGGCA----GCAAACGTCTC-CACTCCAGG---AACCCGTAGAGTTAGTCCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1438987 577 - 108792865 TGACGACTC-TCAATCTGTCCACATTTCATAGAGGACAAGTGTGGCTTCCCAGAGAGTGTGGAGAACGGGGACTTCGTGCACTGTGAGGAGTCTGGGCGGCGCGTGCTGGTGTATTCCTGCCGGCACGGATATGAGCTCCAGGGCCAGGAGCAGCTCACCTGCACCCAGGAAGGGTGGGATTTCCAGCCTCCCCGCTGCAAAGGTCAGTCCTTTAACGG-GGCGTGTG--TTATTTCGTGAT--AATTACATAAC----ATTTGCCCGTTTCCAGTGTAAATTAAGAATTCAATGTCA-----TTGA----AAATTTCTTCGCCAA-AGCTGCACTTGA----G-GCTGTTATCTT-CCAGGAAAAATTTGGGGATGGAAGCC-CAGGTCTGTCCTCTTGCCTGGCCGTGCTCC-----CAGTCGGCGT-CT-TTCTAGG-----TAGTCGGGGCTCGGGAGAG-GCATG-GGAATCGTGA-CCAATGGGGTCACCAGTGAGGGAAGAGAGA--GGAGTCAGTGAGTTC-CAGGCAAGGTT----GTG---G--TGAACTGGCAGGGCCATTTTCTCAGA-GGAAACACAACA----GCTAACATTTC-CACTTCAGA---AACCCGGAGAGCAAGGCTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1267998 578 - 7082604 TGACGACTTGTCAACCTGTCCACATTTCATAGAGGACAAGTGTGGCTTCCCAGAGAGCGTGGAGAACGGGGACTTCGTGCACTGTGAGGAGTCTGGGAGGCGCGTGCTGGTGTATTCCTGCCGGCACGGATATGAGCTCCAGGGCCAGCAGCAGCTCACCTGCACCCAGGAAGGGTGGGATTTCCAGCCTCCCCGCTGCAAAGGTCAGTCCTTTAAC-G-GGTGTGTG--TTCTTTCGTGAC--AATTACGTAAC----ATTTGCACGTTTCCAGTGTAAATTAAGAATTCAATGTCA-----TTGA----AAATGTCTTTGCCAA-AGCTGCACCTGA----G-GCTCTCGTCTT-CCAGGACGAGTTTGGGGTTAGAAGTC-AAGGTCTCTCCTCTTGCCTGGCCATGCTCC-----CAGCTGGCGG-CT-TTCTAGG-----TAGGGGGGGCTCGGGAGCG-GCACGTGGAATCGTGA-CCAATGGGGTCGCCAGTGAGGGAAGAGAGA--GGAGTCGGTGAGTTC-CAGTCAAGGTT----GTG---G--TGAACTGGCAGGGTCATTTTCTCAGA-GAAAGCACAACA----GCAAACGTTTC-CACTTCAGA---AACCCAGAGAGCAAGGCTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1362080 579 + 1864846 TGACGACATGTCAACCTGTCCACATTTCATAGAGGACAAGTGTGGCTTCCCAGAGAGCGTGGAGAACGGGGACTTCGTGCACTGTGAGGAGTCTGGGAGGCGCGTGCTGGTGTACTCCTGCCGGCACGGATATGAGCTCCAGGGCCAGGAGCAGCTCACCTGCACCCAGGAAGGGTGGGACTTCCAGCCTCCCCGCTGCAAAGGTCAGTCCTTTAACAG-GGTGTGTG--TTCTTTTGTGAC--AATTACATAAC----ATTTGCACATTTCCAGTGTAAATTAAGAATTCAATGTCA-----TTGA----AAATTTATTCGCCAA-AGCTGCACCTGA----G-GCTGTTATCTT-CCCGGAGAAATTTGGGGACAGAAGTC-AAGATCCCTCCTCTTACCTGGCCATGCTCC-----CAGTTGGCGT-CT-TTCTAGG-----TAGTGGGGGCTTGGGAGAG-GCACGTGGAATCGTGA-CCAATGGGGTCACCAGTGAGGGAAGAGAGA--AGAGTTGGTGAGTTT-CAGGCAAGGTT----GTG---G--TGAACTGGCAGGGCCATTTTCTCAGA-GGAAACACAACA----GCAAACGTTTC-CACCTCAGA---AACTCGGAAAGCAAGGCTG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 180472 578 + 287728 TGATGACATGTCAACCTGTCCACATTTCATAGGGGACAAGTGTGGCTTCCCAGAGAGCGTGGAGAACGGGGACTTCGTGCACTGTGAGGAGTCCGGGAGGCGTGTGCTGGTGTATACCTGCCGGCACGGATATGAGCTCCAGGGCCAGGAGCAGCTCACCTGCACCCCGGAAGGGTGGGATTTCCAGCCTCCCCGCTGCAAAGGTCAGTCCTTTAACGG-GGCATGTG--TTCTTTCGTGAC--AATTACATAAC----ATTTGCACGTTTCCAGTGTAAACTAAGAATTCAATGTCA-----TTGA----AAATTTCTTCGCCAA-AGCTGGACCTGA----G-GCTGTTACCTT-CCAGGAGAAATTTGGGGATAGAA-TC-AAGGTCTCTCCTCTTGCCTGGCCATGCTCC-----CAGTCGGCTT-CT-TTCTAGG-----TAGGGGGGGCTCGGGAGAA-GCACGTGGAATCGTGA-CCAATGGGGTCACCAGTGAGGGAAGAGAGA--GGAGTCGGTGAGTTC-CAGGCAAGGTT----GTG---G--CGAACTGGCAGGGCCGTTTTCTCAGA-GGAAACACAACA----GCCAACGCTTC-CACTTCAGA---AACCCAGAGAGCAAGGCTG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 959539 573 + 5252280 TGACTGTGTTTTGACCTGT-GACATTGCACAGATGACAAGTGTGGCTTCCCAGCAAAGGTGGACAATGGGGACTTCGTGCCGTGTGAGGAGGCCGGGAGGCGCATGCTGGTGTTTTCCTGCCACCAGGGGTTCGAGCTGCAGGGCCAAGAGCAGGTCACCTGCACCCAGCAAGGGTGGGACTCCCCGTCCCCCATCTGCAAAGGTCAGTCACTTAACAGCTGTG------TTTCCTATTGAC--AATTACA-AGC----ATCTGCTTGTGTCAAATGCACATAGAGAACA-AATGTTAGCATCCTGT----CCTCCCCTTTGCCAG-AGGGCCTGGGGA----A-CATGTCACCTGCCAGGCAGC--TCTGGG---AGGAGGCGAAGGGCCAGCCTCGTAGTTGGCCATGTCCC-----CAGAAAACAT-CT-GTCTAGA-----CAACAATGTCTCAGGATGG-CCGCCTCAAATCATGACCCCCTAGGGCCGCAGGCCAGGGAAGGGAA---GGAGTCTGGATGTTC-CTCTCAAGGCT----GCGAGAA--GGGGCCTGCAGAGCCAGTCTCTCAGATGGACACACAGC---------ACGTTT--CACTCAAGG---CGCCTGCAGAGCCAGGCTC i otoGar3.GL873658 C 0 I 1015 s mm10.chr12 90044213 552 - 120129022 TTACTGCATTTTGACCT-TCCACGTTCCGTAGATGACAAGTGTGTCTTCCCAGAGGAGGTGGACAATGGGAACTTTGTGCACTGTGAAGAGTCTGGGAAGCTGGTGCTTGTATACTCCTGTTTCCATGGATACAAGCTGCAGGGCCAGGAGCAGGTCACATGTACCCAGAAGGGATGGGACTCCGAACCTCCTGTCTGTAAAGGTCAGTGGT--------ATCATGTGGTGTGGTTAACAGT--AATTACCAAAC---AATCTAT---TTCCCTGTGGAA-----------AACATCA---------------GATCCTTCACCAAAGCATTACTCTGA----GCACAGGTATC--CCTAGAGCTGATCTGGCACTGAGGAGA-AAGAATGTCTCTCT--GTTGTCCATA---------CCGCATTGCT-TT-CTCCAGA-----TGGCAAAACATGGAGACAG-TCACGTCAAATCTGGA-CTCATGGTGATTTCAACGAGGAGTGAAGAAAAGGAGCTAATAAGTTC-TAGACAAGGTT----AGG---GACAGAATTTTCAGACCCTGTTCCCCAAA-TGAAATA--GCA----GAGAAGGTTCT-CACTCCTGGTGAGACCCATAGA--AAGACCC i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1789001 615 + 4416731 TGATCATATTTTGACATTTCAATGTTGTATAGATGACAAGTGTAGTTTCCCAGATAAAGTGGATAATGGGGACTTTGTGTACTGTGATGAATCTGGAAAACGTGTCTTGGTGTACTCCTGTCATCATGGATATGAGCTTCAAGGACAAGAACAGATCACTTGCACAGACAAAGGATGGGATTTCCAACCACCTATTTGTAAAGGTCAGTCATTTAACAA-GGCATTTA--TTTATTAATGACTTAATTACAAAAATAAAATCTGCATTTTTCAAATAAGAATTAATAATA-AATGTCA-----TTGACTATCTATTCCTTCCCTGAAAGGTACTTCTGAGCATA-ATTAATATCA--CCAGGAACTGTTTCGGCATGGAAATA-AATTATTCTCTCATTAGTTAACCATGTTTCTTCATCAGATGTTCT-CA-GTAATGGAACATGATTGAAGCATCAAGGCAGTTCTCATCAAAACATGA-CTGATGGGGAAGGAAGACAGGAAAAGAGAAATGAGGAAAGCCAATTCATACAGAAAGTTTATAGTA---A--AGAATATACAGAGCCAATTTCTTAAA-TGAAACAAAATAGGGGGAAAATGTTTTACCCTCTAAG---AATCTGCAGATTAAGGCCC i dasNov3.JH576208 I 2291 C 0 a score=3115897.000000 s hg38.chr2_KI270774v1_alt 179501 399 + 223625 GCCTCCACCTCCACCTCCTACAGGTG-GCTGATTCCCAAGCCCATG--CCTGGTCCTCCTCCAGCCACTGGGTTCCACTCCCAGCCTCCCGCATGTTT---------AGGTGTGGACAAGTGTGGCTTCCTGG-CGGTAATTTGAGAGCA-GGATGGGG-AGGCAC-CTTTCAGGCCGCAAGGCAAGACAGCCGTGGGCCACT-TCCACCTGCTC-CTCCCATGTG-CTGGCTTGAGCGGGTGTCA-GCCCAGG-GCACCTGGGA-----G---CAGGTGTGCTGGACAACAGAGCCTCCCGGGG--GGAGAGCCGTGTACTGGGGTTCCT-CTGCGGGGAA--CAGC-----AGA--ATGAGAGTCCCCATCTGACTGTTCTGAGGC-------AGAGCCCTCTGGGTGCGACT--------CCTGAGG-CTGGGG-----CTTCCTGTCAGAGCAGCTT s panTro5.chr2A 1476364 399 + 111504155 ACCTCCACCTCCACCTCCTACAGGTG-GCTGATTCCCAAGCCCGTG--CCTGGTCCTCCTCCAGCCACTGGGTTCCACTCCCAGCCTCCCGCATGTTT---------AGGTGTGGACAGGTGTGGCCTCCTGG-CGGTAATTTGAGAGCA-GGATGGGG-AGGCAC-CTTTCAGGCCGCAAGGCAAGACAGCCGTGGGCCACC-TCCACCTGCTC-CTCCCATGCG-CTGGCTTGAGCGGGTGTCA-GCCCAGG-GCACCTGGGA-----G---CAGGTGTGCTGGACAACAGAGCCTCCCGGGG--GAAGAGCCATGTACTGGGGTCCCT-CTGCGGAGAA--GAAC-----AGA--ATGAGAGTCCCCATCTGACTGTTCTGAGGC-------AGAGCCCTCTGGGTGCGACT--------CCTGAGG-CTGGGG-----CTTCCTGTCAGAGCAGCTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1415484 399 + 114371477 ACCTCCACCTCCACCTCCTACAGGTG-GCTGATTCCCAAGCCCGTG--CCTGGTCCTCCTCCAGCCACTGGGTTCCACTCCCAGCCTCCCGCATGTTT---------AGGTGTGGACAGGTGTGGCCTCCTGG-CGGTAATTTGAGAGCA-GGATGGGG-AGGCAC-CTTTCAGGCCTCAAGGCAAGACAGCCGTGGGCCACC-TCCACCTGCTC-CTCCCATGCG-CTGGCTTGAGCGGGTGTCA-GCCCAGG-GCACCTGGGA-----G---CAGGTGTGCTGGACAACAGAGCCTCCCGGGG--GAAGAGCCATGTACTGGGGTCCCT-CTGCGGAGAA--GAAC-----AGA--ATGAGAGTCCCCATCTGACTGTTCTGAGGC-------AGAGCCCTCTGGGTGCGACT--------CCTGAGG-CTGGGG-----CTTCCTGTCAGAGCAGCTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1439572 399 + 1464242 GCCTCCGCCTCCACCTCCTACAGGTG-GCTGATTCCCAAGCCCGTG--CCTGGTCCTCCTCCAGCCACTGGGTTCCACTCCCAGCCTCCCGCATGTTT---------AGGTGTGGACAGGTGTGGCCTCCCGG-CGGTAATTTGAGAGCA-GGATGGGG-AGGCAC-CTTTCAGGCCGCAAGGCAAGACAGCCGTGGGCCACC-TCCACCTGCTC-CTCCCATGTG-CTGGCTTGAGCGGGTGTCA-GCCCAGG-GCACCTGGGA-----G---CAGGTGTGCTGGACAACAGAGCCTCCCTGGG--GAAGAGCCGTGTACTGGGGTCCCT-CTGCGGGGAA--CAGC-----AGA--ATGAGAGTCCCCATCTGACTGTTCTGAGAC-------AGAGCCCTCTGGGTGCGACT--------CCTGAGG-CTGGGG-----CTTCCTGTCAGAGCAGCTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1164474 380 + 81552678 G------CCTCCACCTCCTACAGGTG-GCTGATTCCCAAGCCCATG--CGTGGTCCTCCTCCAGCCACTGGGTTCCACTCCCAGCCTCCCGCATGTTT---------AGGTGTGGACAGGTGTGGCCTCCC-G-TGGTAATTTGAGAGCA-GGATGGGG-AGGCAC-CTTACAGGCCGAAAGGCAAGACAGCCGTGGGCCACC-TCCACCTGCTC-CTCCCAT-------------GCGGGTGTCA-GCCCAGG-GCAGCTGGGA-----G---CAGGTGTGCTGGACAACAGAGCCTCCCAGGG--GAAGAGCCGGGTACTGGGGTCCCT-CTGCGGGGAG--CAGC-----AGA--ATGAGAGTCCCCGTCTGACTGTTCTGAGAC-------AGAGCCCTCTGGGTGCGACT--------CCTGAGG-CTGGGG-----CTTCCTGTCAGAGCAGCTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1491795 382 + 108979918 G------CCTCCGCCTCCCACAGGTG-GCTGATTCCGAAGCCCATG--CCTGG---TTCTCCAGTCGCTGGGTTTCACTCCCAGCCTCCTGTGTGTTT---------AGGTGTAGACAGGTGCGGGCTCCTAG-CGGTGGCTTGAGAGCA-GGTTGGGG-AGGCA--------------AAGGCAAAACAGCTGTGGGCCACC-TCCCCCTGCTC-CTCCCATGCGCCTGGCTTGAGCGGGTGTCA-GCCCAGG-GCACCTGGGA-----G---CAGGTTTGCTGGACAACAGAGCCTCCCAGGG--GAAGAGCCATGTACTGGGGTCCCT-CTGCGGGGAG--CAGC-----AGA--ATGAGAGTCCCCCACTGACTGTTCTGAGACA---GAAAGAGCCCTCTGGGTGCAACT--------CCTGAGG-CTGGGG-----CATCCTGTCGGAGCAGCTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1464216 382 - 111193037 G------CCTCCGCCTCCCACAGGTG-GCTGATTCCGAAGCCCATG--CCTGG---TTCTCCAGTCGCTGGGTTTCACTCCCAGCCTCCTGTGTGTTT---------AGGTGTAGACAGGTGCGGGCTCCTAG-CGGTGGCTTGAGAGCA-GGTTGGGG-AGGCA--------------AAGGCAAAACAGCTGTGGGCCACC-TCCACCTCCTC-CTCCCATGCGCCTGGCTTGAGCGGGTGTCA-GCCCAGG-GCACCTGGGA-----G---CAGGTTTGCTGGACAACAGAGCCTCCCAGGG--GAAGAGCCATGTACTGGGGTCCCT-CTGCGGGGAG--CAGC-----AGA--ATGAGAGTCCCCCACTGACTGTTCTGAGACA---GAAAGAGCCCTCTGGGTGCAACT--------CCTGAGG-CTGGGG-----CGTCCTGTCGGAGCAGCTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1492606 382 + 3644372 G------CCTCCGCCTCCCACAGGTG-GCTGATTCCGAAGCCCATG--CCTGG---TTCTCCAGTCGCTGGGTTTCACTCCCAGCCTCCTGTGTGTTT---------AGGTGTAGACAGGTGCGGGCTCCTAG-CGGTGGCTTGAGAGCA-GGTTGGGG-AGGCA--------------AAGGCAAAACAGCTGTGGGCCACC-TCCACCTCCTC-CTCCCATGCGCCTGGCTTGAGCGGGTGTCA-GCCCAGG-GCACCTGGGA-----G---CAGGTTTGCTGGACAACAGAGCCTCCCAGGG--GAAGAGCCATGTACTGGGGTCCCT-CTGCGGGGAG--CAGC-----AGA--ATGAGAGTCCCCCACTGACTGTTCTGAGACA---GAAAGAGCCCTCTGGGTGCAACT--------CCTGAGG-CTGGGG-----CGTCCTGTCGGAGCAGCTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1446832 385 - 10304083 G------CCTCCGCCTCCCACAGGTG-GCTGATTCCGAAGCCCATG--CCTGGTTCTTCTCCAGTCGCTGGGTTTCACTCCCAGCTTCCTGCATGTTT---------AGGTGTAGACAGGTGTGGGCTCCTAG-CGGTGACTTGAGAGCA-GGTTGGGA-AGGCA--------------AAGGCAAAACAGCTGTGGGCCTCC-TCCACCTGCTC-CTCCCATGCGCCTGGCTTGAGTGGGTGTCA-GCCCAGG-GCACCTGGGA-----G---CAGGTTTGCTGGACAACAGAGCCTCCCAGGG--GAAGAGCCACGTACTGGGGTCCCT-CTGCGGGGAG--CAGC-----AGA--ATGAGAGTCCCCCACTGACTGTTCTGAGACA---GAAAGAGCCCTCTGGGTGCAACT--------CCTGAGG-CTGGGG-----CGTCCTGTCGGAGCGGCGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1526924 384 - 107702431 G------CCTCCACCTCCCACAGGTG-GCTGATTCCGAAGCCCACG--CCTGGTTCTTCTCCAGTTACTGGGTTTCACTCCCAGCCTCCTGCATATT-------------------CAGGTGCGGGCTCCTCA-CGGTAACTTGAGAGCA-GGTTGGGG-AGGCAC-CTTTCAGGCCGCAAGGCAAGACAGCTGTGGGCCACC-TCCACCTGCTC-CTCCCATGTGCCTGGCTTGAGCGGGTGTCA-GCCCAGG-GCACCTGGGA-----G---CAGGTTTGCTGGACAGCAGAGCCTCCCAGGG--GAAGAGCCATGTACTGGGGTCCCT-CTGCGGGGAG--CAGC-----AGA--ATGAGAGTCCCCCACTGACTGTTCTGAGAC-------AGAGCCCTCTGGGTGCAACT--------CCTGAGG-CTGGGG-----CATCCCGTCGGAGCAGCTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1019296 385 - 2200435 G------CCTCTGCCTCCCACAGGTG-GCTGATTCCGAAGCCCATG--CCTGGTTCTTCTCCAGTCGCTGGGTTTCACTCCCAGCCTCCTGCATGTTT---------AGGTGTAGACAGGTGCGGGCTCCTAG-CGGTGACTTGAGAGCA-GGTTGGGG-AGGCA--------------AAGGCAAAACAGCTGTGGGCCACC-TCCACCTCCTC-CTCCCATGCGCCTGGCTTGAGTGGGTGTCA-GCCCAGG-GCACCTGGGA-----G---CAGGTTTGCTGGACAACAGAGCCTCCCAGGG--GAAGAGCCACGTACTGGGGTCCCT-CTGCGGGGAG--CAGC-----AGA--ATGAGAGTCCCCCACTGACTGTTCTGAGACA---GAAAGAGCCCTCTGGGTGCAACT--------CCTGAGG-CTGGGG-----CATCCTGTCGAAGCGGCGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1450040 380 - 13651311 G------CCTCCGCCTCCCACAGGTG-GCTGATTCTGAAGCCCATG--CCTGGTTCTTCTCCAGTCGCT-GGTTTCACTTCCAGCCTCCTGCATGTTT---------AGGTGTAGACAGGTGCGGGCTCCTAG-CGGTAACTTGAAAGCA-GGGTGGGG-AGGCA--------------AAGGCAAGACAGCTGTGGGCCACC-TCCACCTGCTC-CTCCCATGTGCCTGGTTTGAGTGGGTGTTG-GCCCAGG-GCACCTGGGA-----G---CGGGTTTGCTGGACAACAGAGCCTCCCAGGG--GAAGAGCCATGTACTGGGGTCCCT-CTGCGGGGAG--CAGC-----AGA--ATGAGAGTCCCCCACTGACTGTTCTGAGAC-------AGAGCTCTCTGGGTGCAACT--------CCTGAGG-CTGGGG-----CGTCCTGTTGGAGCAGCTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1439564 359 - 108792865 GCCTCCACCCCCACCTCCTATAGGCA-GCTGATTTCCAAG-CTGGG--CCTGG---TCCTCCGGCTGCTGGGTTCCTCTCCCAGCC-------TGTCT---------AGGTGTGGACAGGTGCAGCCTCCCTG-CTGTAACTTGAGAGCA-GGCTG--------------------------GTGAGACACCC--CGACCATC-TCCACCTGCTC-CTCCCATGCGCCTGGCTTGAGCCGCCATCA-GCCCAGG-GCACCTGGGA-----G---CAGCCATGCTGGACGACAGAGCCTCCCAGGG--GAAGAGCCATGTTCTGGGGTCACT-CTTTGGGAAG--CAGC-----AGA--ATGGGCATCCTCATCCAACTGTTCTG-----------AGAGCTCTCTGGGTAAGACC--------CCCGTGG-CTGGGG-----CTTCCTGTCGGAGCAGCTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1268576 363 - 7082604 GCCTCCACCCCCACCTCCTACAGGCG-GCTGATTTCCAAG-CTGGG--CCTGG---TCCTCCAGCTGCTGGGTTCCTCTCTCAGCCTCCCACATGTCT---------AGGTGTGGGCAGGTGCAGCCTCCCTG-CCGTAACCTGAGAGCA-GGCCG----------------------------GAGGCAGCC--CAGCCACC-TCCACCTGCTC-CTCCCATGTGCCTGGCTTGAGTGGGCGTCA-GCCCAGG-GCACC-GGGA-----G---CGGGCATGCTGGACGACAGAGCCTCCCAGGA--GAAGAGCCGTGTGCTGGGGTCACT-CTTCGGGGAG--CTGC-----AGA--ATGGGCGTCCCCGTCCGACTGTTCTG-----------AGAGCTCTCTGGGCGAGACT--------CCCGTGG-CTGGGG-----CTTCCTGTCAGAGCAGCTC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1362659 389 + 1864846 GCCTCCACCCCCATCTCCTACAGGCA-GCTGATTTCCAAG-CTGGA--CCTGG---TCCTCTGGCCACTGGGTTCCTCTCCCAGCCTCCAGCGTGTCT---------AGGTGTGGACAGGTGCAGCCTCCCTG-CCGTAACTTGAGAGCA-GGCTGGGG-AGGCAC-CTTTCAGGCCGCAAGGCGAGACACCC--TGACCACC-TCCGCCTGCTC-CTCCCATGTGCCTGGCTTGAGTGGGCATCA-GCCCAGG-GCACC-GGGA-----G---CAGGCATGCCGGACGACAGAGCCTCCCAGGG--GAGGAGCCCTGTGCTGGGGTCACT-CTTCAGGCAG--CAGC-----AGA--ATGGGCGTCCCCATCCGACTGTTCTG-----------AGAGCTCTCTGCGTGAGATC--------CCCGTGG-CTGGGG-----CTTCCTGTCGGAGCAGCTC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 181050 387 + 287728 GCCTCCACCCCCACCTCCTACAGGCG-GCTGCTTTCCAAG-CTGGG--CCTGG---TCCTC-AGCCGCTGGGTTCCTCTCCCAGCCTCCTGCAT-TCT---------AGGTGTGGACAGGGGCAGCCTCCCTG-CCGTAACTTGAGAGCA-GGCTGGGG-AGGCAC-CTTTCAGGCCTCAAGGCGAGACA-CC--TGACCACA-TCCACCTGCTC-CTCCCGTTCGCCTGGCTTGAGCGGGCGTCA-GCCCAGG-GCACCTGGGA-----G---CAGGCGTGCTGGACGACGGAGCCTCCCAGGG--GAAGAGCTGTGTGCTGGGGTCACT-CTTGGGGGAG--CAGC-----AGA--ATGGGCGTCCCCATCCGACTGTTCTG-----------AGAGATCTCTGGGTGAGACC--------CCCGTGG-CTGGGG-----CTTCCTGTCGAAGCAGCTT i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90044765 337 - 120129022 -AGAACAATCATGCCTT-----GGCGCACTGCCTTCCCAG-CTGTGTTCTTGG-CCTCCTCCGGCTCAGGAAATCAATTTCC------------------------------------------------------------TGAGAGCA-GAAGGAAGCAGGCA--CTCTCAGGTCCTACTGTAAGGTCTCCCCTGACTTCC-TCCACCCACTT-CTCTCTTATGACTGTGCAGAGTAGGAATCGCCCCCAAT-ATGGCTGGGAAGCTGG---CAAGAGTGTT---------AACCTCTTGAGG--AAAAGCCTGAGTCCTGACTTTTGT-CTGCAGAGAC--AAGTCTGTGAGA--AAGGATACACCCAG------GCTCT------------AGTTCCCTGCCAGTGAGACTTATTGATACCTTAGG-GAAAGA-----TTTTAAGTAAAA------- i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1789616 419 + 4416731 --------TTTCCCACCCTGGGGTTT-GTAGCTT-------ATACA--ACTGG----ACTACAGTTCCAATCTTCAATTTACAGTAACCCAAACATTTTGTGAATCGaggtgtagatatgtgctgaattttagccaatgaaatgagagcacaagtggtg-atacctacttccaggcaccctaaaaaaactttcatgagccacctttcacttgctctttcccttttgacagcttggaaaggctatga-caccaggaaaacctggga-----aaatcatgtgttgaagatggctgagctgccaaatattaaaagcctaggtccttgaatcactactgtaggaaaaccagc-----agaccagggacattcccattggcctgctctatgaaacttgaataaacttcatgcactatgcc--------cctaaggtctggggactttttTCCTCTTAAAGCAACtt i dasNov3.JH576208 C 0 I 1180 e otoGar3.GL873658 960112 1015 + 5252280 I a score=612835.000000 s hg38.chr2_KI270774v1_alt 179900 73 + 223625 GCGTCCTCCAAC--TACTTCAGAACTGC--CCTGCCACAAAACCTGGACCGCTGGTTCTGGTCTCATGGGACAGTGG s panTro5.chr2A 1476763 73 + 111504155 GCGTCCCCCAAC--TACTTCAGAACTGC--CCTGCAACAAAACCTGGACAGCTGGTTCTGGTCTCATGGGACAGTGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1415883 73 + 114371477 GCATCCTCCAAC--TACTTCAGAACTGC--CCTGCAACAAAACCTGGACAGCTGGTTCTGGTCTCATGGGACAGTGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1439971 71 + 1464242 GCGTCCCCCAGC--TACTTCAGAACTGC--CCTGCAACAAAACCTGGACCGCTGGTTCTGGTCTCATGG--CAGTGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1164854 73 + 81552678 GCGTTCCCCAAC--TACTTCAGAAATGC--TCTGCAACAAAACCTGGGCCACTGGTTCTGGTCTCATGGGCCGGTGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1492177 72 + 108979918 GTGTCCCCCAGC--TACTTCAGAAACGC--CCTGCAACAAAACCCGGACCGCTGGCTCTGGTCTCATGGGCCAG-GG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1464598 72 - 111193037 GTGTCCCCCAGC--TACTTCAGAAACGC--CCTGCAACAAAACCCGGACCGCTGGCTCTGGTCTCATGGGCCAG-GG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1492988 73 + 3644372 GTGTCCCCCAGC--TACTTCAGAAACGC--CCTGCAACAAAACCCGGACCGCTGGCTCTGGTCTCATGGGCCAGTGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1447217 72 - 10304083 GTGTCCCCCAGC--TACTTCAGAAACGC--CCTGCAACAAAACCCGGACCGCTGGCTCTGGTCTCATGGGCCAG-GG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1527308 73 - 107702431 GTGTCCCCCAGC--TACTTCAGAAACGC--CCTGCAACAAAACCCGGACCGCTGGCTCTGGTCTCATGGGCCAGTGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1019681 72 - 2200435 GTGTCCCCCAGC--TACTTCAGAAACGC--CCTGCAACAAAACCCGGACCGCTGGCTCTGGTCTCATGGGCCAG-GG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1450420 73 - 13651311 GTGTCCCCCAGC--TACTTCAGAAACGC--CCTGCAACAAAACCTGGCCTGCTGGCTCTGGTCTCATGGGCCAGTGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1439923 73 - 108792865 GAATCCCCCAAC--TATTTCAGAAACAC--CCTTCAAGCAAACCTGGACGGCTGGCTCTGGTCTCCTGGGCCGGCGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1268939 73 - 7082604 GAATCCCCCAAC--TATTTCAGAAACAC--CCTGCAAGCAAACCCGGACGGCTGGCTCTGGTCTCCTGGGCCGGCGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1363048 72 + 1864846 GAATCCCCCAAC--TATTTCAGAAACAC--CCTGCAAGCAAA-CTGGACAGCTGTCTCTGGTCTCCTGAGCCGGCGG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 181437 72 + 287728 GAATCCCCCAAC---AATTCAGAAACAC--CCTGCAAGCAAACCCAGACGTCTGGCTCTGGTCTCCTGGGGCGGCGG i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90045102 66 - 120129022 ---TCTTTCAGTTTTACTTAAAATCTGCCTCCTATAAGTA-----GCACTTCTG---CCAGGGGCATGGAGCAGTGA i mm10.chr12 C 0 I 87 e otoGar3.GL873658 960112 1015 + 5252280 I e dasNov3.JH576208 1790035 1180 + 4416731 I a score=826755.000000 s hg38.chr2_KI270774v1_alt 179973 98 + 223625 CGTCAGGGCAGGCAGGAGCAGGAATGGCTGCTGTTCTGGGAGGAAGGCTGCTCAGATGACACtcaccagcaatctttagaaggccaaccagctgcctt s panTro5.chr2A 1476836 98 + 111504155 CGTCAGGGCAGGCAGGAGCAGGAATGGCTGCTGTTCTGGGAGGAAGGCTGCTCAGATGACACtcaccagcaatctttagaaggcaaaccagctgcctt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1415956 98 + 114371477 CGTCAGGGCAGGCAGGAGCAGGAATGGCTGCTGTTCTGGGAGGAAGGCTGCTCAGATGACACtcaccagcaatctttagaaggcaaaccagctgcctt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1440042 98 + 1464242 CGTCAGGGCAGGCAGGAGCAGGAATGGCTGCTGTTCTGGGAGGAAGGCTGCTCAGATGACACtcaccagcaatctttagaaggccaaccagctgcctt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1164927 98 + 81552678 GGTCAGGGCAGGCAGGGGCAGGAATGGCTGCTGTTCTCGGAGGAAGGTTGCTCAGACGATACTCACCAGCAATCTttagaaggccaaccagctgcctt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1492249 95 + 108979918 GGTCAGGGCAGGCAGGAGCAGGAATGGCTGCTGTTCCCAGAGGAAGGTTGCTCAGACGACACTCACCAGCAATGTTTAGAAGGCCA---AGCTGCCTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1464670 95 - 111193037 GGTCAGGGCAGGCAGGAGCAGGAATGGCTGCTGTTCCCAGAGGAAGGTTGCTCAGACGACACTCACCAGCAATGTTTAGAAGGCCA---AGCTGCCTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1493061 95 + 3644372 GGTCAGGGCAGGCAGGAGCAGGAATGGCTGCTGTTCCCAGAGGAAGGTTGCTCAGACGACACTCACCAGCAATGTTTAGAAGGCCA---AGCTGCCTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1447289 95 - 10304083 GGTCAGGGCAGGCAGGAGCAGGAATGGCTGCTGTTCTCGGAGGAAGGTTGCTCAGACGACACTCACCAGCAATGTTTAGAAGGCCA---GGCTGCCTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1527381 81 - 107702431 GGTCAGGGCAGGCAGGAGCAGGAATGGCTGCTGTTCTCGGAGGAAGGG--------------TCACCAGCAGTCTTTAGAAGGCCA---AGCTGCCTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1019753 95 - 2200435 GGTCAGGGCAGGCAGGAGCAGGAATGGCTGCTGTTCTCGGAGGCAGGTTGCTCAGACGACACTCACCAGCAATGTTTAGAAGGCCA---GGCTGCCTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1450493 95 - 13651311 GGTCAGGGCAGGCAGGAGCAGGAATGGCTGCTGTTCTCGGAGGAAGGTTGCTCAGACGACACTCACTAGCAATCTTTAGAAGGCCA---AGCTGCCTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1439996 96 - 108792865 GATCAGGGCAGGCAGG-GCAGGAACGGCTGCTGTTCTCAGAGGAAGGTGGCTCTGACAACACTCAC-AGCAATCTTTAAGAGGCCAACCAGCTACCTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1269012 96 - 7082604 GATCAGGGCAGGCCGG-GCAGGAACGGCGGCTGTTCTCGGAGGAAGGCGGCTCAGACAACACTCAC-AGCAATCTTCAGGAGGCCAACCAGTTACCTT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1363120 96 + 1864846 GATCAGGGCAGGCAGG-GCAGGAACGGCTGCTGTTCTCGGAGGAAGGTGGCTCAGACAACACTCAC-AGCAATCTCTAGGAGGCCAACCAGCTACCTT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 181509 91 + 287728 GATCAGGGCAGGCAGG-GCAGGAACGGCTGCTGTTCTCGGAAGAAGATGCCTCAGATAA----CAC-AGCGATCTTTAGAAGGCCAA-CGGCTACCTT i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90045168 87 - 120129022 I e otoGar3.GL873658 960112 1015 + 5252280 I e dasNov3.JH576208 1790035 1180 + 4416731 I a score=295555.000000 s hg38.chr2_KI270774v1_alt 180071 34 + 223625 cagggactgcattttaggagaggaaagttggcat s panTro5.chr2A 1476934 34 + 111504155 cagggactgcattttaggggaggaaagttggcat i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1416054 34 + 114371477 cagggactgcattttaggggaggaaagttggcat i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1440140 34 + 1464242 cagggactgcattttaggagaggaaagttggcat i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1165025 34 + 81552678 cagggactgcaatttaggggaggaaaattggcat i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1492344 34 + 108979918 CAGGGACTGCGTTTTAGGGGAGGAAAACTGGCAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1464765 34 - 111193037 CAGGGACTGCGTTTTAGGGGAGGAAAACTGGCAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1493156 34 + 3644372 CAGGGACTGCGTTTTAGGGGAGGAAAACTGGCAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1447384 34 - 10304083 CAGGGACTGCGTTTTAGGGGAGGAAAACTGGCAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1527462 34 - 107702431 CAGGGACTGCGTTTTAGGGGAGGAAAACTGGCAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1019848 34 - 2200435 CAGGGACTGCGTTTTAGGGGAGGAAAACTGGCAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1450588 34 - 13651311 CAGGGACTGCGTTTTAGGGGAGGAAAACTGACAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1440092 33 - 108792865 CCAGGACTGCATTGTCGTGGAGGAAACTT-GCAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1269108 34 - 7082604 CCAGCACTGCATTTTCGTGGAGGAAAATTGGCAT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1363216 34 + 1864846 CCAGGACTGCATTTTCGTGGAAGAAAATTGGCAT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 181600 34 + 287728 CCAGGACTGCGTTTTCGTGGAGGAAAATTGTCAT i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90045255 22 - 120129022 CAGAGCCTGCATTCCAAGTGTT------------ i mm10.chr12 I 87 C 0 e otoGar3.GL873658 960112 1015 + 5252280 I e dasNov3.JH576208 1790035 1180 + 4416731 I a score=1695596.000000 s hg38.chr2_KI270774v1_alt 180105 213 + 223625 cagactcacagtctcctgtgagctacgtgctatgagctgcacttacctagaccgcagaagaaagagatggtctcgtgcaagaatctggctggtttgcaagcagaaatacaagcaaaGTCCACAGTTTTCAGTTTTCTC----AGAGTTTTCAGAAGATGAAAGAGTCCTGGAGccagtgctttgggagacccaggtgagagaatcctctgaggccag s panTro5.chr2A 1476968 213 + 111504155 cagactcacagtctcctgtgagctacatgctataagctgcacttacctagaccgcagaagaaagagatggtctcgtgcaagaatctggctggtttgcaagcagaaatacaagcaaaGTCCACAGTTTTCAGTTTTCTC----AGAGTTTTCAGAAGGTGAAAGAGTcctggagccagtgctttgggagacccaggtgagagaatcctttgaggccag i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1416088 213 + 114371477 cagactcacagtctcctgtgagctacatgctataagctgcacttacctagaccgcagaagaaagagatggtctcgtgcaagaatctggctggtttgcaagcagaaatacaagcaaaGTCCACAGTTTTCAGTTTTCTC----AGAGTTTTCAGAAGATGAAAGAGTcctggagccagtgctttgggagacccaggtgagagaatcctttgaggccag i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1440174 212 + 1464242 cggactcacagtctcctgtgagctacatgctataagctgcacttacctagaccgcagaagaaagagatggtctc-tgcaagaatctggctggtttgcaagcagaaatacaagCAAAGTCCACAGTTTTCAGTTTTCTC----AGAGTTTTCAGAAGATGAAAGAGTcctggagccagtgctttgggagacccaggtgagagaatcctttgaggccag i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1165059 211 + 81552678 cagactcacagcctcctgtgagctacctgctatgagctgcacttacctagactgcagaagaaagagatggtctcatgcaagaatctggctggtttgcaagcagaaataaaagCAAAGTCCACAGTTTTCAGTTTTCTC----AGAGTTTTCAGAAGATG--AGAGTCCTGGAGccagtgctttgggagacccaggtgagagaatcctttgaggccag i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1492378 210 + 108979918 CAGACACAGAGCCTCCTGTGAGCTGC-TGCTATGAGCTGCACTAACCTAGACCACAGaagaaagagagggtctcgtgccagaatctggctggtttgcaagtagaaataaaagCAAAATCC--AGTTTTCAGTTTTCTC----AGAGTTTTCAGAAGACGAAAGGGTcctggagccagtgctttgggagacccaggtgaaagaatcctttgaggccag i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1464799 210 - 111193037 CAGACACAGAGCCTCCTGTGAGCTGC-TGCTATGAGCTGCACTAACCTAGACCACAGaagaaagagagggtctcgtgccagaatctggctggtttgcaagtagaaataaaagCAAAATCC--AGTTTTCAGTTTTCTC----AGAGTTTTCAGAAGACGAAAGGGTCCTGGAGccagtgctttgggagacccaggtgaaagaatcctttgaggccag i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1493190 210 + 3644372 CAGACACAGAGCCTCCTGTGAGCTGC-TGCTATGAGCTGCACTAACCTAGACCGCAGAAGAAAGGGAGGGTCTCGTGCCAGAATCTGGCTGCTTTGCCAGTAGAAATAAAAGCAAAATCC--AGTTTTCAGTTTTCTC----AGAGTTTTCAGAAGACGAAAGGGTCCTGGAGccagtgctttgggagacccaggtgaaagaatcctttgaggccag i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1447418 212 - 10304083 CAGACACAGAGCCTCCTGTGAGCTGC-TGCTATGAGCTGCACTAACCTAGACCACAGaagaaagagagggtctcgtgccagaatctggctggtttgcaagtagaaataaaagCAAAATCCATAGTTTTCAGTTTTCTC----AGAGTTTTCAGAAGACGAAAGGGTCCTGGAGccagtgctttgggagacccaggtgaaagaatcttttgaggccag i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1527496 208 - 107702431 CAGACACAGAGCCTCCTGTGAGCTGC-TGCTATGAGCTGCACTAACCTGGACCGCAGaagaaagagagggtctcgtgcaagaatctggctggtttgcaagtagaaataaaagCAAAATCCACAGTT----GCTTTCTC----AGAGTTTTCAGAAAATGAAAGAGTCCTGGAGccagcgctttgggagacccaggtgaaagaatcctttgaggccag i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1019882 210 - 2200435 CAGACACAGAGCCTCCTGTGAGCTGC-TGCTATGAGCTGCACTAACCTAGACCACAGaagaaagagagggtctcgtgccagaatctggctggtttgcaagtagaaataaaagCAAAATCCACAGTTTTCAGTTTTCTC----AGAGTTTTCAGAAGATG--AGAGTCCTGGAGccagtgctttgggagacccaggtgaaagaatcctttgcggccag i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1450622 212 - 13651311 CAGACACAGAGCCTCCtgtgagctgc-tgctatgagctgcactaacctagaccgcagaagaaaaagagggtctcatgcgagaatctggctggtttgcaagtaaaaataaaagcaaaATCCACAGTTTTCAGTTTTCTC----AGAGTTTTCAGAAGATGAAAGAGTCTTGGAGccagtgctttgggagacccaggcgaaagaatcctttgaggccag i colAng1.NW_012118821v1 C 0 I 12 s calJac3.chr14 1440125 206 - 108792865 CAGACACAGAGCCTCCTGGGAGCTACCTGCTGTGGGCACCACTTACCCGGACCTCAGAAGAAAGA-------TGGTGCAGGAATCTGGCTGGTTTGCAAGCAGAAGCAAAAGCGAAGTCCACAACTTTCAGTTTTCTC----AGAGTTTTTAGAAGGTGAAAGAGTCCTGGAGccagtgttttgggacacccaggtgagagactccttggaggccag i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1269142 185 - 7082604 CAGACACAGAGCCTCCtgtgagctacctgctatgagccccacttacctagacatcagaagaaagagatgatctcgtacaggaatctggctggtttgcaagcagaaataaaagcaaagtccacaactttcagttttctc----agagttTTTAGAAGGTGAAAGAGTCCTg----------------------------gagaatccttggaagtcag i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 181634 206 + 287728 CAGACAGCGAGCCTGCTGTCAGCTACCTGCTCTGAGC-------GCCTGGACGTCAGaagaaagagatggcctcgtgcaggaatctggctggtttgcaagcagaaataaaagcaaagtccacaactttcagttttctc----agagttTTTAGAAGGTGAAAGAGTCCTGGAGccagtgatttgggagacccaggtgagagaatccttggaggccag i aotNan1.NW_018513311v1 C 0 C 0 s mm10.chr12 90045277 167 - 120129022 ----CCCACAGA-------------------ATGGGGGACAtttagcaaagtctctgaatgcagaggtgatatcatgaaaggacttggctggtttgcaaacagagata-----aaaATCCAAAAGTTTT-GTTTTCTTTTTAAGAGCTCTGGAAAGCTGGTATGACTCTGTGAACA-------------------TGACAGACACCTCTTAACTC-- i mm10.chr12 C 0 C 0 e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e otoGar3.GL873658 960112 1015 + 5252280 I e dasNov3.JH576208 1790035 1180 + 4416731 I a score=224357.000000 s hg38.chr2_KI270774v1_alt 180318 29 + 223625 gagttcaagaccagcctgagaaaaatagt s panTro5.chr2A 1477181 29 + 111504155 gagttcaagaccagcctgagaaaaatagt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1416301 29 + 114371477 gagttcaagaccagcctgagaaaaatagT i panPan2.chr2A C 0 I 21 s gorGor5.CYUI01015607v1 1440386 29 + 1464242 gagttcaagaccagcctgagaaaaatagt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1165270 29 + 81552678 gagttcaagaccagcctgagaaacatagt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1492588 29 + 108979918 gagttcaagaccagcctgagaaatgtagt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1465009 29 - 111193037 gagttcaagaccagcctgagaaacgtagt i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1493400 29 + 3644372 gagttcaagaccagcctgagaaacgtagt i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1447630 29 - 10304083 gagttcaagaccagcctgagaaacgtagt i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1527704 29 - 107702431 gagttcaagaccagcctgagaaacgtagt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1020092 29 - 2200435 gagttcaagaccagcctgagaaacatagt i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1440331 29 - 108792865 aagttcaagaccagcctgagaaatgtagt i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1269327 29 - 7082604 gagttcaagaccaggctgagaaatgtagt i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 181840 29 + 287728 gcgttcaggaccagcctgagaaatgtagt i aotNan1.NW_018513311v1 C 0 C 0 e mm10.chr12 90045444 0 - 120129022 C e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e otoGar3.GL873658 960112 1015 + 5252280 I e dasNov3.JH576208 1790035 1180 + 4416731 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=32351.000000 s hg38.chr2_KI270774v1_alt 180347 29 + 223625 gaaacccca--tctac-------------caaaaaaaaa-------aaaaa s panTro5.chr2A 1477210 27 + 111504155 gaaagccca--tctac-------------c--aaaaaaa-------aaaaa i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1440415 27 + 1464242 gaaacccca--tctac-------------c--aaaaaaa-------aaaaa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1165299 25 + 81552678 gaaaccccatctctac-------------c--aaaaaaa-------a---- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1492617 29 + 108979918 gaaaccccatctctac-------------a--aaaaaaa-------aaaaa i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1465038 39 - 111193037 gaaaccccatctctac---aaaaaaaaaaa--aaaaaaa-------aaaaa i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1493429 25 + 3644372 gaaaccccatctctac-------------------aaaa-------aaaaa i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1447659 18 - 10304083 gaaaccccatctctac---------------------------------aa i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1527733 42 - 107702431 gaaacctcatctctacaaaaaaaaaaaaaa--aaaaaaa-------aaaaa i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1020121 32 - 2200435 gaaaccccatctctac----------aaaa--aaaaaaa-------aaaaa i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1440360 24 - 108792865 gagaccccatgtctac-------------c--aaaacag------------ i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1269356 24 - 7082604 gagagtccatgtctac-------------c--aaaaaag------------ i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 181869 31 + 287728 gagaccccatgtctac-------------c--aaaaaAGAGGAAAa----- i aotNan1.NW_018513311v1 C 0 I 8 s mm10.chr12 90045444 8 - 120129022 ------CCACATCC------------------------------------- i mm10.chr12 C 0 C 0 e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e otoGar3.GL873658 960112 1015 + 5252280 I e dasNov3.JH576208 1790035 1180 + 4416731 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I e panPan2.chr2A 1416330 21 + 114371477 I a score=54115.000000 s hg38.chr2_KI270774v1_alt 180376 18 + 223625 aaaaaaagtggctgggag s panTro5.chr2A 1477237 18 + 111504155 aaaaAAAGCGGCCGggag i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1440442 18 + 1464242 aaaaaaaacggccgggag i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1165324 9 + 81552678 ---------gacctggag i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1492646 18 + 108979918 aaaaaaaaaggcctggat i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1465077 18 - 111193037 aaaaaaaaaGGCctggac i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1493454 18 + 3644372 aaaaaaaaaggcctggac i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1447677 18 - 10304083 aaaaaaaaaggcctggac i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1527775 18 - 107702431 aaaaaaaaaGGCctggag i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1020153 18 - 2200435 aaaaaaaaaGGCctggag i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1440384 16 - 108792865 --gaaaaaAgtcctggag i calJac3.chr14 C 0 I 2 s saiBol1.JH378218 1269380 12 - 7082604 -----aaaaGTCCTGGA- i saiBol1.JH378218 C 0 C 0 s mm10.chr12 90045452 10 - 120129022 --------AGTTTCTGAG i mm10.chr12 C 0 C 0 e aotNan1.NW_018513311v1 181900 8 + 287728 I e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e otoGar3.GL873658 960112 1015 + 5252280 I e dasNov3.JH576208 1790035 1180 + 4416731 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I e panPan2.chr2A 1416330 21 + 114371477 I a score=1772219.000000 s hg38.chr2_KI270774v1_alt 180394 305 + 223625 ggggatggtgtgataagttgcacaaggtcagtgtgctcaatgccagtgaactgtacatttaaaaatggcagaggtggtaaagtttacattatgtataattcagcacaataacaa-----aaTTTCCATTTCAATTTTgaaagtccaaaatg-tttctccttg-aagggttgcagtggtcaactgcttccagaccctcagtcataaag--ggagaggct-gagaccctgtgtgcaccaga---gacccaccaggactcagtgctgtggcagg-ggtcaggtaggggtgcggctcccgc----caagtctgtggtctcag--gtgcc s panTro5.chr2A 1477255 304 + 111504155 ggggatggtgtgataagtt-cacaaggtcaatgtgctcaatgccagtgaactgtacgtttaaaaatggcggaggtggtaaagtttacattatgtataattcagcacaatACCAA-----AATTTCCATTTGAATTTTgaaagtccaaaatg-tttctccttg-aagggttgcagtggtcaactgcttccagaccctcagtcataaag--ggagaggct-gagaccccgtgtgcaccaga---gacccaccaggactcagtgctgtggcagg-ggtcaggtaggggtgcggctcccgc----caagtctgtggtctcag--gtgcc i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1440460 305 + 1464242 ggggatggtgtgataagttgcacaaggtcaacgtgctcaacgccagtgaactgttcatttaaaaatggcggaggtggtaaattttacattatgtataattcagcacaatACCAA-----AATTTCCATTTCAATTTTgaaagtccaaaatg-tttctccttg-aagggttgcagtggtcaactgcttccagaccctcagtcataaag--ggagaggct-gagaccctgtgtgcaccaga---gacccaccaggactcagtgctgtggcagg-ggtcaggtaggggtgcggctcccgc----caagtctgtggtctcag--gtgcc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1165333 306 + 81552678 ggggatggcgtgataagttgcacaaggtcaatgtgctcagtgccattgaactgtacatttaaaaatggctgaggtggtaaattttacattatgtataatttagcacaataacaa-----aaTTTCCATTTCAATTTTgaaagtccaaaatg-tttgtccttgaaagggttgcagtggccaactgcttccagaccctcagtcataaag--ggagaggct-gagaccctgtgtgcaccaga---gacccaccaggactccgtcctgtggcagg-ggtcaggtagaggtgcggctcctgc----caagtctgcggtctcag--gtgcc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1492664 296 + 108979918 ggggatggtgggataagttgcacaagg---------tcaataccattgaactgcacatttaaaaatggctgaggtggtaaatttcacattatgtataatttagcacagtaacaa-----aaTTTCCATTTCAATTTTgaaagtccaaaatg-tttgtccttg-aagggttgcagtggccaactgcttctagaccctcagtcgtaaag--ggagaggct-gagaccccgcgtgcaccaga---gacccagcaggactcagtgctagggcagg-ggtcaggtaggggtgcggctccctc----caagtctgtggtctcag--atgcc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1465095 296 - 111193037 ggggatggtgggataagttgcacaagg---------tcaataccattgaactgcacatttaaaaatggctgaggtggtaaatttcacattatgtataatttagcacagtaacaa-----aaTTTCCATTTCAATTTTgaaagtccaaaatg-tttgtccttg-aagggttgcagtggccaactgcttctagaccctcagtcgtaaag--ggagaggct-gagaccccgcgtgcaccaga---gacccagcaggactcagtgctagggcagg-ggtcaggtaggggtgcggctccctc----caagtctgtggtctcag--atgcc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1493472 296 + 3644372 ggggatggtgggATAAGTTGCACAAGG---------tcaataccattgaactgcacatttaaaaatggctgaggtggtaaatttcacattatgtataatttagcacagtaacaa-----aATTTCCATTTCAATTTTgaaagtccaaaatg-tttgtccttg-aagggttgcagtggccaactgcttctagaccctcagtcgtaaag--ggagaggct-gagaccccgcgtgcaccaga---gacccagcaggactcagtgctagggcagg-ggtcaggtaggggtgcggctccctc----caagtctgtggtctcag--atgcc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1447695 296 - 10304083 ggggatggtggGATAAGTTGCACAAGG---------tcaataccattgaactgtacatttaaaaatggctgaggtggtaaatttcacattatgtataatttagcatagtaacaa-----aATTTCCATTTCAATTTTgaaagtccaaaatg-tttgtccttg-aagggttgcagtggccaactgcttccagaccctcagtcgtaaag--ggagaggct-gagaccccacgtgcaccaga---gacccaccaggactcagtgctagggcagg-cgtcaggtaggggtgcggctccctc----caagtctgtggtctcag--gtgcc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1527793 296 - 107702431 ggggatgtggggataagttacacaagg---------tcaataccattgaactgcacatttaaaaatggctgaggtggtaaatttcacattatgtataatttagcacagtaacaa-----aaTTTCCATTTCAATTTTgaaagtccaaaatg-tttgtccttg-aagggttgcagtggccaactgcttccagaccctcagtcgtaaag--ggagaggct-gagaccccacgtgcaccaga---gacccagcaggactcagtgctagggcggg-ggtcaggtaggggtgcggctccctc----caagtctgtggtctcag--gtgcc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1020171 296 - 2200435 ggggatggtgggataagttgcacaagg---------tcaataccattgaactgtacatttaaaaatggctgaggtggtaaatttcacattatgtataatttagcacagtaacaa-----aaTTTCCATTTCAATTTTgaaagtccaaaatg-tttgtccttg-aagggttgcagtggccaactgcttccagaccctcagtcgtaaag--ggagaggct-gagaccccgcgtgcaccaga---gacccagcaggactcagtgctagggcagg-ggtcaggtaggggtgcggctccctc----caagtctgtggtctcag--gtgcc i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1440402 307 - 108792865 ggggagggtgtgataagctgcacaaggtcactgtgcttgatgccactgaactggatgtttaaaaacggctgaggtggtaaatttcacattatatataatttagcacagtataaaaTTTCAATTTCAGTTTCAATTTTgaaagtcagaaacg-tttgtccctg-aagggctgccatagccaactccttccaaagcctcagttgtaaag--ggagaggct-gagaccctacgtgcat--ga---gacccaccaggactcagggctgcggcagg--gtcaggtcagggtgcggttcccgc----cgggtctgtggtctcag--gcacc i calJac3.chr14 I 2 C 0 s saiBol1.JH378218 1269392 304 - 7082604 GGGGAGGATGTGGTCAGCCGCacaaggtcagtgtgctcgatgcccttgaactggacgtttaaaaatgactgaggtggcaaatttcacattatgtatgatttagcacaataacaa-----aaTTTCAATTTCAATTTTGAAAGTCCAAAATG-TTTGTCCTTG-AGGGGCTGCCATAGCCAACCCCTTCCAAAGCCTCAGTCGTAAAG--GGAGAGGCT-GAGACCCCGTGTGCACCAGA---GACCCACCAGGATTCAGCGCTGTGGCGGG--GTCAGGTAGGTGTGTGGCTCCCGC----TGTGTCTGAGGTCTCGG--GCAAC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 181908 279 + 287728 ggggagggtgtgatgagctgcacaaggtcagagtgcttcatgccattgaactggacgtttagaaatggctgaggtggtaaatttcacattatgtataatttagcacgataacaa-----aaTTTCAATTTCAATTTTGAAAGTCCAAAATG-TTTGTCCCTG-AAGG-------------------------ACCTCAGTCGTAAAG--GGAGAGGAT-GAGACCCTGTGTGCACCAGG---GACCCACCAGGACTCAGCGC-GTGGCAGG--GTCAGGACGG-GTGCCGCTCCCGC----CGTGTCTGAGGTCTCAGGCGCGCC i aotNan1.NW_018513311v1 I 8 C 0 s mm10.chr12 90045462 229 - 120129022 ---------------------------------------------------------------------------GGTGAACTTCAGTTTACATCTCCTTTGGCACAAGGATGA-----GCATGTCATTTTAACTTTGAAA-CCCAGAGTGTTTTTTTCTTG-AAAGGTTATAAT-GCTAATCATTTTTAAACCCTGAATAGTAAAGAAGAAGAGGGTCAAGGCTCAGCCTTGGCCATGATTGACTCCTGTGTTCTGCACACCATGGCAGACAGTCATGTTGG------GTTCCCCCAGTGCATAACTGTAGTCTAAG------- i mm10.chr12 C 0 C 0 e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e otoGar3.GL873658 960112 1015 + 5252280 I e dasNov3.JH576208 1790035 1180 + 4416731 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I e panPan2.chr2A 1416330 21 + 114371477 I a score=1381566.000000 s hg38.chr2_KI270774v1_alt 180699 199 + 223625 ctcccgggagccaccttcccattagaagaggagagaagggatgaggagaggaagaaacaaagctggcctggggaacggtgcctcggaaataactttcaaactcactaacggcacaaggagctgcctgggcatggatagggcagaggcctgctacataggtgaggggg--tgtcatcactggaaaccagcagcctgggctgg s panTro5.chr2A 1477559 201 + 111504155 ctcccgggagccaccttcccgttagaagaggagagaagggatgaggagaggaagaaacaaagctggcctggggaacggtgcctcggaaataactttcaaactcactaatggcacaaggagctgcctgggcatggatagggcagaggcctgctacataggcgaggggggatgtcatggctggaaaccagcagcctgggccgg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1416351 201 + 114371477 CTCCCGGGAGCCACCTTCCCGTTAGAAGAGGAGAGAagggatgaggagaggaagaaacaaagctggcctggggaacggtgcctcggaaataactttcaaactcactaatggcacaaggagctgcctgggcatggatagggcagaggcctgctacataggcgagggggggtgtcatggctggaaaccagcagcctgggccgg i panPan2.chr2A I 21 C 0 s gorGor5.CYUI01015607v1 1440765 201 + 1464242 ctcccgggagccaccttcccgttagaagaggagagaagggatgaggagaggaagaaacaaagctggcctggggaacggtgcctcggaaataactttcaaactcactaacggcacaaggagctgcctgggcatggatagggcagaggcctgctacataggtgagggggggtgtcattgctggaaaccagcagcctgggctgg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1165639 196 + 81552678 ctcccgggagccactttcccattaagacaggagagaagggatgaggagaggaagaagcaaagctgg-ctggggaacagtgcctgggaaataactttcagagtctctaacagcacagggcgctgcctgggcatagatagggcagaggtctgctccacaggtgagggagg-tgtcatcactggaaac---cagcctgggctgg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1492960 200 + 108979918 ctcccaggagccatctttctgttaggagaggagagaagggatgaggagaggaggaaacaaagccag-ctggggaacggtgcctcggaaataactttcagagtcgctgaggacacagggagctgcctgggcacagatagggcagaggcctgctacgtagctgagggagggtgtcatcgctggaaaccagcagcctgggctgg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1465391 200 - 111193037 ctcccaggagccatctttctgttaggagaggagagaagggatgaggagaggaggaaacgaagccag-ctggggaacggtgcctcggaaataactttcagagtcgctgaggacacagggagctgcctgggcacagatagggcagaggcctgctacgtagctgagggagggtgtcatcgctggaaaccagcagcctgggctgg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1493768 200 + 3644372 ctcccaggagccatctttctgttaggagaggagagaagggatgaggagaggaggaaatgaagccag-ctggggaacggtgcctcggaaataactttcagagtcgctgaggacacagggagctgcctgggcacagatagggcagaggcctgctacgtagctgagggagggtgtcatcgctggaaaccagcagcctgggctgg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1447991 200 - 10304083 ctcccaggagccatctttctgttaggagaggagagaagggatgaggaaaggaagacacaaagccag-CTGGGGAACGGTGCCTCGGAAATAACTTTCAGAGTCACTGAGGACACAGGGAGCTGTCTGGGCATAGATAGGGCAGAGGCCTGCTACATAGATGAGGGAGGGTGTCATCGCTGGAAACCAGCAGCCTGGGCTGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1528089 200 - 107702431 ctcccaggagccatctttctgttaggaaaggagagaagggatgaggagaggaagaaacgaagccag-ctggggaacggtgcctcggaaataactttcagagtcgctgaggacacagggagctgcctgggcatagatagggcagaggccttctacatagatgagggagggtgtcatcactggaaaccagcagcctgggctgg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1020467 200 - 2200435 ctcccaggagccatctttctgttaggagaggagagaagggatgaggagagGAGGAAACGAAGCCAC-CTGGGGAATGGTGCCTCAGAAATAACTTTCAGAGTCGCTAAGGACACAGGGAGCTGCCTGGGCACAGATAGGGCAGAGGCCTGCTACGTAGATGCGGGAGGGTGTCATCGCTGGAAACCGGCAGCCTGGGCTGG i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1440709 199 - 108792865 ctcctgggagccaccttcccattaggaggcgagagaagggatgtggagaggaagaaaggaagc-gg-ctggggaacggtgcctccgaaataaatttcagagtcactaggggcacagggagctgcctgggcatcagcagggcaaagtcctgctTCGTGGGCAAGGGAGGGCGCCATCGCTGGAAAACAGCAGCCTGGGCTGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1269696 199 - 7082604 CTCCCAGGAGCCACCTTCCCATTAGGAGGGCAGAGAAGGGATGTGGAGAGGGAAAAAGGAAGC-AG-CTGGGGAACGGTGCCTCGGAAACAACTTTCAGAGTCACTAGGGGAACAGGGAGCTGCCTGGGCATCAACAGGGCAGAGGCCTGCTGCGTGGGTGAGGGAGGATGCCATCACCGGGAAACAGCAGCCTGGGCTGG i saiBol1.JH378218 C 0 I 4 s aotNan1.NW_018513311v1 182187 198 + 287728 CTTCCGGGAGCCACCTTCCCATTAGGAGGGGAGAGAAGGGATGTGGAGAGGAAGAAAGGAAGC-GG-CTGGGGAACGGTGCCTCGGAAATAACTTTCAGAGTCACGGGCGGCACAGGGAGCTGCCTGGGCATGAACAGGGCAGAGGCCTGCTGCGTGGGCGAGGGAGGGTGCCATCACCGAG-AACAGCAGCCTGGGCTGG i aotNan1.NW_018513311v1 C 0 I 101 s mm10.chr12 90045691 135 - 120129022 ---------ACCA-------------------------GGACAAGGAAGAGAGGAAGCAGAGATAG----GAAAATTGT-------------------------ctggcagcctggtgaactgcccaggaatcaatgggtctgaagccttccgggtaagagatgaaa---gctactgagagaatacaccaatctgacctgg i mm10.chr12 C 0 C 0 e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e otoGar3.GL873658 960112 1015 + 5252280 I e dasNov3.JH576208 1790035 1180 + 4416731 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=28388.000000 s hg38.chr2_KI270774v1_alt 180898 5 + 223625 aaacc s panTro5.chr2A 1477760 5 + 111504155 aaacc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1416552 5 + 114371477 aaacc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1440966 5 + 1464242 aaacc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1165835 5 + 81552678 aaacc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1493160 5 + 108979918 aaaCC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1465591 5 - 111193037 aaaCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1493968 5 + 3644372 aaaCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1448191 5 - 10304083 AAACC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1528289 5 - 107702431 aaaCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1020667 5 - 2200435 AAACC i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1440908 3 - 108792865 --GCC i calJac3.chr14 C 0 I 2 s mm10.chr12 90045826 4 - 120129022 -atcc i mm10.chr12 C 0 C 0 e aotNan1.NW_018513311v1 182385 101 + 287728 I e saiBol1.JH378218 1269895 4 - 7082604 I e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e otoGar3.GL873658 960112 1015 + 5252280 I e dasNov3.JH576208 1790035 1180 + 4416731 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=261143.000000 s hg38.chr2_KI270774v1_alt 180903 57 + 223625 ctct---gtttaaacTGTTAATTGCACAATGCCAGATTTGCA---------------------------------gacgtgctcccctgctgc s panTro5.chr2A 1477765 57 + 111504155 ctct---gtttaaacTGTTAATTGCACAATGCCAGATTTGCA---------------------------------gacgtgctcccctgctgc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1416557 57 + 114371477 ctct---gtttaaacTGTTAATTGCACAATGCCAGATTTGCA---------------------------------gacgtgctcccctgctgc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1440971 57 + 1464242 ctct---gtttaaacTGTTAATTGCACAATGCCAGATTTGCA---------------------------------gacgtgctcccctgctgc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1165840 57 + 81552678 ctct---gtttaaacTGGTAATTCCACAATGTCAGATTTGCA---------------------------------GACGTGCTCCCCTGCTGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1493165 56 + 108979918 CTC----GTTTAAACTGTTAATTGCACGATGCTAGATTTGTA---------------------------------GACGTGCTCCCCTGCTGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1465596 56 - 111193037 CTC----GTTTAAACTGTTAATTGCACGATGCTAGATTTGTA---------------------------------GACGTGCTCCCCTGCTGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1493973 56 + 3644372 CTC----GTTTAAACTGTTAATTGCACGATGCTAGATTTGTA---------------------------------GACGTGCTCCCCTGCTGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1448196 56 - 10304083 CTT----GTTTAAACTGTTAATTGCACGATGCTAGATTTGTA---------------------------------GACGTGCTCCCCTGCCGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1528294 56 - 107702431 CTC----GTTTAAACTGTTAATTGCACGATGCTAGATTTGTA---------------------------------GACGTGCTCCCCTGCCGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1020672 56 - 2200435 CTC----GTTTAAACTGTTAATTGCACGATGCTAGATTTGTA---------------------------------GACGTGCTCCCCTGCTGC i manLeu1.NW_012103754v1 C 0 C 0 s mm10.chr12 90045830 90 - 120129022 ---tgggatgtaaaccaacaattccactcccccagacttgtaccagtagaaagtgggctgtgaaggcccagagctgacagactccccagctcc i mm10.chr12 C 0 C 0 e aotNan1.NW_018513311v1 182385 101 + 287728 I e saiBol1.JH378218 1269895 4 - 7082604 I e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e otoGar3.GL873658 960112 1015 + 5252280 I e dasNov3.JH576208 1790035 1180 + 4416731 I e calJac3.chr14 1440911 2 - 108792865 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=1238815.000000 s hg38.chr2_KI270774v1_alt 180960 264 + 223625 attttgggattggtcatgaatgacagtgtacaaggaga--tcacccagagatt----acagtgccccagagaacagcagaccaggatgtttctcccagaga---acTTTCCAGAAGCCTCG--------GTGAT-AGAAACACAACTACTCTGTCGG--GTGATGACATCTGTGTAAACTCGTGGTTGCTGTTAAC-ACTATTGC--ATGACTCCTGACCA-TAGGCTCTGCCACTGACACTTCAGTGACAAAAGGGTCACGAAT-CGCAAGGTTTTCCTGTTCCCTTG s panTro5.chr2A 1477822 266 + 111504155 attttgggattggtcatgaatgacagtgtacaaggaga--tcacccagagatt--agacagtgccccagagaacagcagaccaggatgtttctcccagaga---acTTTCCAGAAGCCTTG--------GTGAT-AGAAACACAACTACTCTGTCGG--GTGATGACATCTGTGTAAACTCGTGGTTGCTGTTAGC-ACTATTGC--ATGACTCCTGACCA-TAGGCTCTGCCGCTGACCCTTCAGTGACAAAAGGGTCACGAAT-CGCAAGGTTTTCCTGTTCCCTTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1416614 266 + 114371477 attttgggattggtcatgaatgacagtgtacaaggaga--tcacccagagatt--agacagtgccccagagaacagcagaccaggatgtttctcccagaga---acTTTCCAGAAGCCTTG--------GTGAT-AGAAACACAACTACTCTGTCGG--GTGATGACATCTGTGTAAACTCGTGGTTGCTGTTAGC-ACTATTGC--ATGACTCCTGACCA-TAGGCTCTGCCACTGACCCTTCAGTGACAAAAGGGTCACGAAT-CGCAAGGTTTTCCTGTTCCCTTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1441028 265 + 1464242 attttgggattggtcatgaatgacagtgtacaaggaga--tcacccagagatt--agacagtgccccagagaacagcagaccaggatgtttctcccagaga---acTTTCCAGAAGCCTCA--------GTGAT-AGAAACACAACTACTCTGTCGG--GTGATGACATCTGTGTAAACTCGTGGTTGCTGTTAAC-ACTATTGC--ATGACTGCTGGCCA-TAGGCTCTGCCGCTGACCCTTCAGTGACAAAAGGGTCACGAAT-TGCAAGGTTTT-CTGTTCCCTTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1165897 266 + 81552678 ATTTTGGGATtggtcatgaatgacggtgtacaaggaaa--tcacccagagatt--agacagtgccccagagaacagcagaccaggatgtctctcccagaga---acTTTCCAGAAGCCTCA--------GTGAT-AGATACACAACTACTCTGTCGG--GTGATGACGTCTGTGTAAACTCGTGGTTGCTGTTAAC-ACTATTGC--ATGACTCCTGGCCG-TAGGCTCTGCCGCTGACCCTTCAGTGACAAAAGGATCATGAAT-CGCAAGGTTTTCCTGTTCCCTTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1493221 265 + 108979918 ATTTTGGGATtggtcacaaatgacaatgtacaaggaag--ccacccagaggtt--agacaatgccccagagaacagcagaccaggatgtttctcccaggga---acTTTCCGGAAGCCTCG--------GTGTTCCGAAATACAGCTACTCTGTTGG--GTGATGACATCCGTGTAAACTTGTGGCTGCTGTTAAC-ACCACTGC--ATGGCTCCTGGCCG-CGGGCTCTGTCACTGGCCCTTCGGTGACAAAGGGATCACGAAT-CGC--GCTTCTCCTGTTTCCTTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1465652 265 - 111193037 ATTTTGGGATtggtcacaaatgacagtgtacaaggaag--ccacccagaggtt--agacaatgccccagagaacagcagaccaggatgtttctcccaggga---acTTTCAGGAAGCCTCG--------GTGTTCCGAAATACAGCTACTCTGTTGG--GTGATGGCATCCGTGTAAACTTGTGGCTGCTGTTAAC-ACCACTGC--ATGGCTCCTGGCCG-CGGGCTCTGTCACTGGCCCTTCGGTGACAAAGGGATCACGAAT-CGC--GCTTCTCCTGTTTCCTTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1494029 265 + 3644372 ATTTTGGGATtggtcacaaatgacaatgtacaaggaag--ccacccagaggtt--agacaatgccccagagaacagcagaccaggatgtttctcccaggga---acTTTCCGGAAGCCTCG--------GTGTTCCGAAATACAGCTACTCTGTTGG--GTGATGGCATCCGTGTAAACTTGTGGTTGCTGTTAAC-ACCACTGC--ATGACTCCTGGCCG-CGGGCTCTGTCACTGACCCTTCGGTGACAAAGGGATCACGAAT-CGC--GCTTCTCCTGTTTCCTTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1448252 264 - 10304083 GTTTTGGGATTGGTCACAAATGATGATGTACAAGGAAA--CCACCCAGAGGTT--AGACAATGCCCCAGAGAACAGCAGACCAGGATGTTTCTCCCAGGGA---ACTTTCCGGAAGCCTCG--------GTGAT-AGAAACACAGCTACTCTGTCGG--GCGATGACATCTGTGTAAACTCGTGGTTGCTGTTAAC-ACCACTGC--ATGACTCCTGGCCG-TAGGCTCTGTCACTGACCCTTCGGTGACAAAGGGATCACGAAT-CGT--GCTTCTCCTGTTCCCTTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1528350 264 - 107702431 GTTCTGGGATtggtcacaaatgacgatgtacaaggaaa--ccacccagaggtt--agacaatgccccagagaacagcagaccaggatgtttctcccaggga---acTTTCCGGAAGCCTCG--------GTGAT-AGAAACACAGCGACTCTGTCGG--GCGATGACATCTGTGTAAACTTGTGGTTGCTGTTAAC-ACCACTGC--ATGACTCCTGGCCG-CGGGCTCTGTCACTGACCCTTCAGTGACGAAAGGATCACGAAT-CGT--GCTTCTCCTGTTCCCTTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1020728 264 - 2200435 GTTCTGGGATTGGTCACAAATGACAATGTACAAGGAAA--CCACCCAGAGGTT--AGACAATGCCCCAGAGAACAGCAGACCAGGATGTTTCTCCCAGGGA---ACTTTCCGGAAGCCTCG--------GTGAT-AGAAACACAGCTACTCTGTCGG--GCGATGACATCTGTGTAAACTCGTGGTTGCTGTTAAC-ACCACTGC--ATGACTCCTGGCCG-CGGGCTCTGTCACTGACCCTTCAGTGACAAAGGGATCACGAAT-CGC--GCTTCTCCTGTTCCCTTG i manLeu1.NW_012103754v1 C 0 C 0 s mm10.chr12 90045920 258 - 120129022 gtttgggatctgatcatgagccacagtgggccaaggaa--caaggccaag------gactttattactcagaaca------cagagattctctcccagaag---ac-----agaatGCCCGTGGAAAGAATGAT-AGAAGACCAGATGTTCTATGAA--GTGGCAACATCTGTGTGCAGGTGTTGTTTCTGACACCTGCTACTTT-GATCACTCTGAATTA-TCACATTTTGTAGTTAATCTTCATTAACA---TTATGACAAAC-CTCAAAGCTTTCATGCTGGTTTG i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1791215 272 + 4416731 attttagattgggttgtggatgataatgggcaaggagaagctacacagagtttagagacaaagccatggaagacaatggg-caaggtgctcctctcagagagcTACTTTCCAGAAAATTCAC-------TTTAC-AGGAACCCAACTGTTCTGTAAATTGTGGCAACATCTGTATGTGTTCATTATCGCTGTTAACTACCTCTTTTATTAACTCGTGATAATTATATTCCGTAGCT--------AGGAGGGAAAGTATAATATATATGGAGGGTTTTCGTGTTGTCTTG i dasNov3.JH576208 I 1180 C 0 e aotNan1.NW_018513311v1 182385 101 + 287728 I e saiBol1.JH378218 1269895 4 - 7082604 I e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e otoGar3.GL873658 960112 1015 + 5252280 I e calJac3.chr14 1440911 2 - 108792865 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=549871.000000 s hg38.chr2_KI270774v1_alt 181224 116 + 223625 GCTTAGAGACTGCACAAACTTGAAACGGCCACTTCACTCACGATTCCTGGTTTTCCGTGTTGGCATTACAGTTAAGGAATTGATGGCAGGTGCTTCAGGGTATAGCATGTTGCGTG s panTro5.chr2A 1478088 116 + 111504155 GCTTAGAGACTGCACAAACTTGAAACGGCCACTTCACCCACGATTCCTGGTTTTCCGTGTTGGCATTACAGTTAAGGAATTGATGGCAGGTGCTTCAGGGTGTAGCATGTTGCGTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1416880 116 + 114371477 GCTTAGAGACTGCACAAACTTGAAACGGCCACTTCACCCACGATTCCTGGTTTTCCGTGTTGGCATTACAGTTAAGGAACTGATGGCAGGTGCTTCAGGGTGTAGCATGTTGCGTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1441293 115 + 1464242 GCTTAGAGACTGCACAAACTTGAAACGGCCACTTCACCCACGATTCCTGGTTTTCTGTGTTGGCATTACAGTTAAGGAATTGATGGCAGGTGCTTCAGGGCATAGCATGTTGC-TG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1166163 116 + 81552678 GCTTAGAGACTGTGCAAACTTGAAATGGCCACTTCACCCACGATTCCTGCTTTTCCCTGTTGGCATTACAGTTAAGGAATTGATGGCAGGTGCTTCAGGGCATAGCACGCTGCGTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1493486 115 + 108979918 GCTTAGAGGCTGTGCAAGCTTGAAGTGCCCACTTCACCCCCG-TTCCTGGTTTTCCATGTTGGCATCACCGTTAAGGAATTGATGGCAAGTGCTTCAGGGCGCAGCGCGTTGCATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1465917 115 - 111193037 GCTTAGAGACTGTGCAAGCTCGAAGTGCCCACTTCACCCCCG-TTCCTGGTTTTCCATGTTGGCATCACCGTTAAGGAATTGATGGCAAGTGCTTCAGGGCGCAGCACGTTGCATG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1494294 115 + 3644372 GCTTAGAGACTGTGCAAGCTTGAAGTGCCCACTTCACCCCCG-TTCCTGGTTTTCCATGTTGGCATCACCGTTAAGGAATTGATGGCAAGTGCTTCAGGGCGCAGCACGTTGCATG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1448516 115 - 10304083 GCTTAGAGACTGTGCAAGCTTGAAGTGCCCACTTCACCCCCG-TTCCTGGTTTTCCATGTTGGCATCACCGTTAAGGAATTGATGGCAAGTGCTTCAGGGCGCAGCACATTGCGTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1528614 115 - 107702431 GCTTAGAGACTGTGCAAGCTTGAAGTGCCCACTTCACCCCCA-TTCCTGGTTTTCCATGTGGGCATCACCGTTAAGGAATTGATGGCAAGTGCTTCAGGGCACAGCACGTTGCATG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1020992 115 - 2200435 GCTTAGAGACTGTGCAAGCTTGAAGTGCCCACTTCACCCCCG-TTCCTGGTTTTCCATGTTGGCATCACCATTAAGGAATTGACGGCAAGTGCTTCAGGGTGCAGCACGTTGCATG i manLeu1.NW_012103754v1 C 0 C 0 s otoGar3.GL873658 961127 91 + 5252280 GCTCAGTGCCTGTGCATACCTGACCCACCC-CTTCACTGGTGGTTCCTGGTTTCCTGTTTGGGTCACACC----AGGA-------GAAAGGGCCT-------------GGTGCGTG i otoGar3.GL873658 I 1015 I 9 s mm10.chr12 90046178 104 - 120129022 GCTTAGCAATTAAACAAA----AAATGCTCACTTTACTAGAA-TTGCAGGTTCTCCCCACTGGTGGTGTC-TCACTAGGCTGAGAGT-----CCCCAGGGTTTGGCACAGTG-ATA i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1791487 116 + 4416731 GCTTACTGGCTATGCAAAATTGAAATGCCCACTTTACCCGAGATACTTTATTTTCATGTTTGGCAGTATAATGGAGAAAAACAAGATGTCTGCTTCAAGGTTTGGTACCTTGAAAG i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 182385 101 + 287728 I e saiBol1.JH378218 1269895 4 - 7082604 I e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e calJac3.chr14 1440911 2 - 108792865 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=166669.000000 s hg38.chr2_KI270774v1_alt 181340 35 + 223625 TTCTAC-GTTAA-CAAGCCTTCCTATGGTGC----ACTTCA s panTro5.chr2A 1478204 35 + 111504155 TTCTAT-GTTAA-CAGGCCTTCCTATGGTGC----ACTTCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1416996 35 + 114371477 TTCTAT-GTTAA-CAGGCCTTCCTATGGTGC----ACTTCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1441408 35 + 1464242 TTCTAT-GTTAA-CAAGCCTTCCTATGGTGC----AGTTCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1166279 35 + 81552678 TTCTAT-GTTAA-CAAGCCTTCCTACGGTGC----ATTTCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1493601 35 + 108979918 TTCTGT-GTTAA-CAAGCCTTCCTGTGGTGC----ATTTCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1466032 35 - 111193037 TTCTGT-GTTAA-CAAGCCTTCCTGTGGTGC----ATTTCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1494409 35 + 3644372 TTCTGT-GTTAA-CAAGCCTTCCTGTGGTGC----ATTTCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1448631 35 - 10304083 TTCTGT-ATAAA-CAAGCCTTCCTGTGGTGC----TTTTCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1528729 33 - 107702431 TTC--T-GTTAA-CAAGCCTTCCTGTGGCAC----ATTTCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1021107 35 - 2200435 TTCTGT-GTTAA-CAAGCCTTCCTGTGGTGC----ATTTCA i manLeu1.NW_012103754v1 C 0 C 0 s mm10.chr12 90046282 37 - 120129022 TTCTATGGTTGA-CCAGC---CCTGGGGTGCTCATATCTTA i mm10.chr12 C 0 I 2 s dasNov3.JH576208 1791603 38 + 4416731 TTTTAT-GTTCATTAAGCCTTCACATGGTAT--ATACTTCA i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 182385 101 + 287728 I e saiBol1.JH378218 1269895 4 - 7082604 I e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e otoGar3.GL873658 961218 9 + 5252280 I e calJac3.chr14 1440911 2 - 108792865 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=324284.000000 s hg38.chr2_KI270774v1_alt 181375 72 + 223625 -CTGTACACC-TGCGTCTCTCC-TTGCCCAAATACCCAG-----ACGTTTCACGTGTCCATT--TTAGC--TTCATTTTAAGTA s panTro5.chr2A 1478239 72 + 111504155 -CTGTACACC-TGCGTCTCTCC-TTGCCCAAATACCCAG-----ACGTTTCACGTGTCCATT--TTAGC--TTCATTTTAAGTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1417031 72 + 114371477 -CTGTACACC-TGCGTCTCTCC-TTGCCCAAATACCCAG-----ACGTTTCACGTGTCCATT--TTAGC--TTCATTTTAAGTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1441443 72 + 1464242 -CTGTACACC-TGCGTCTTTCC-TTGCCCAAATACCCAG-----ACGTTTCACGTGTCCATT--TTAGC--TTCATTTTAAGTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1166314 67 + 81552678 -CTGTACACC-TGCGT-----C-TTGCCCAAATACCCAG-----ATGTGTCACGTGACCATT--TTAGT--TTCATTTTAAATA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1493636 67 + 108979918 -CTGTACCCC-TACGTCCGTCCTTTGCCCAAATACCCAG-----ATGTTTCACGTGTCCATT--TTAG--------CTTAAGTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1466067 71 - 111193037 -CTGTACACC-TACGTCCGTCC-TTGCCCAAATACCCAG-----ATGTTTCACGTGCCCATT--TTAGC--TT-ATCTTAAGTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1494444 71 + 3644372 -CTGTACACC-TACGTCCGTCC-TTGCCCAAATACCCAG-----ATGTTTCACGTGTCCATT--TTAGC--TT-AGCTTAAGTA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1448666 71 - 10304083 -CTGTACACC-TACATCCTTCC-TTGCCCAAATACCCAG-----ATGTTTCACGTGTCCATT--TTAGC--TT-ATTTTAAGTA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1528762 71 - 107702431 -CTGTACACC-TACATCCTTCC-TTGCCCAAATACCCAG-----ATGTTTCACGTGTCCATT--TTAGC--TT-ATTTTAAGTA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1021142 71 - 2200435 -CTGTACACC-TACGTCCGTCC-TTGCCCAAATACCCAG-----ATGTTTCACGTGTCCATT--TTAGC--TT-ATCTTAAGTA i manLeu1.NW_012103754v1 C 0 C 0 s otoGar3.GL873658 961227 71 + 5252280 -CTGCACACC-TGCACCACTTC--TGCCTAACTGTGCAG-----ACGTCTTATGTATCCACT--TGGCT--ACTGGCTGAGGTG i otoGar3.GL873658 I 9 C 0 s mm10.chr12 90046321 71 - 120129022 -CTGTACACCTTACTTCCTT---TTGTCTAAAAATCTGA-----AC-TTTTGCATCCTCATT--CAGGCTGTTTGCTTTAAG-A i mm10.chr12 I 2 C 0 s dasNov3.JH576208 1791641 80 + 4416731 TGTGTATGCC-TTATGTCTTCT-TTGCCTAAGTATCTAGTTTCTATATTCCTtttgtttatttatttat--ttatttTgaagta i dasNov3.JH576208 C 0 I 279 e aotNan1.NW_018513311v1 182385 101 + 287728 I e saiBol1.JH378218 1269895 4 - 7082604 I e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e calJac3.chr14 1440911 2 - 108792865 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=620639.000000 s hg38.chr2_KI270774v1_alt 181447 195 + 223625 TGAATGACCCCAAAGTGCTACTCACAGGCATCTTCAAGGTGCAAATAAAAGATGGGTGAGACCTTAG-AGTGGATCAGGAAGGGAGACTGCTGGAGTCCTACAACCTG-CCTGTGTGGAGctgccccctgtgcgcgtgccctctgaccttccgcctgccctctgaccttccacctgccctctgacc---tTCCG--CCTGGG s panTro5.chr2A 1478311 176 + 111504155 TGAATGACCCCAAAGTGCTACTCACAGGCATCTTCAAGGTGCAAATAAAAGATGGGTGAGACCTTAG-AGTGGATCAGGAAGGGAGACTGCTGGAGTCCTACAACCTG-CCTGTGTGGAGctgccccctgtgcgtgtgccctctgaccttccg-------------------cctgccccctgacc---tTCCG--CCTGGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1417103 176 + 114371477 TGAATGACCCCAAAGTGCTACTCACAGGCATCTTCAACGTGCAAATAAAAGATGGGTGAGACCTTAG-AGTGGATCAGGAAGGGAGACTGCTGGAGTCCTACAACCTG-CCTGTGTGGAGctgccccctgtgcgtgtgccctctgaccttccg-------------------cctgccctctgacc---tTCCG--CCTGGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1441515 157 + 1464242 TGAATGACCCCAAAGTGCTACTCACAGGCATCTTCAAGGTGCAAATAAAAGATGGGTGAGACCTCAG-AGTGGATCAGAAAGGGAGACTGCTGGAGTCCTACAACCTG-CCTGTGTGGAGCTGCCCCCTGTGTGCATGCCCTCTGACCTTCCG-------------------------------------------CCTGGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1166381 157 + 81552678 TGGATGACCCCGAAGTGCTACTCACAGGGATCTTCAAGGTGCAAATAAAAGATGGGTGAGATCTTAG-AGTGGATCAGGAAGGGAGACCGCTGGTGTCCTGCAACCTG-CCTGTGTGGAGCTGCCCCCCGTGCGCGTGCCCTCTGACCTTCCG-------------------------------------------CCTGGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1493703 156 + 108979918 TGAATGACCCCAAAGTGCTA-TCACAGGGATCTGCAAGGTGCAAATAAAA-ATGGGCGAGACCTTAG-AGTGGATCGGGAAGGGAGACTGCTGGTGTCCTGCAACCTG-CCTGTGCAGAGCTGTCCTCTGTGCACGTGCCCTCTAACCTTCCG----------------------------------------G--CCTGTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1466138 155 - 111193037 TGAATGACCCCAAAGTGCTA-TCACAGGGATCTGCAAGGTGCAAATAAAA-ATGGGCGAGACCTTAG-AGTGGATCGGGAAGGGAGACTGCTGGTGTCCTGCAACCTG-CCTGTGCAGAGCTGT-CCCGGTGCACGTGCCCTCTGACCTTCCG----------------------------------------G--CCTGTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1494515 156 + 3644372 TGAATGACCCCAAAGTGCTA-TCACAGGGATCTGCAAGGTGCAAATAAAA-ATGGGCGAGACCTTAG-AGTGGATCGGGAAGGGAGACTGCTGGTGTCCTGCAACCTG-CCTGTGCAGAGCTGTCCCCTGTGCACGTGCCCTCTGACCTTCTG----------------------------------------G--CCTGTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1448737 140 - 10304083 TGAATGACCCCAAAGTGCTA-TCACAGGGATCTGCAAGGTGCAAATAAAA-ATGGGCGAGACCTTAG-AGTGGATCGGGAAGGGAGACTGCTGGTGTCCTGCAACCTG-----------------CCCTGTGCACGTGCCCTCTGACCTTCTG----------------------------------------G--CCTGTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1528833 156 - 107702431 TGAATGACCCCAAAGTGCTA-TCACAGGGATCTGCAAGGTGCAAATAAAA-ATGGGCGAGACCTTAG-AGTGGATCGGGAAGGGAGACTGCTGGCGTCCTGCAACCTGCCCTGTGCAgagctgtcacctgtg-acgtgccctctgaccttctg----------------------------------------g--cctgtg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1021213 156 - 2200435 TGAATGACCCCAAAGTGCTA-TCACAGGGATCTGCAAGGTGCAAATACAA-ATGGGCGAGACCTTAG-AGTGGATCGGGAAGGGAGACTGCTGGTGTCCTGCAACCTG-CCTGTGCAGAGctgtcccctgtgcacgtgccctctgaccttctg----------------------------------------g--cctgtg i manLeu1.NW_012103754v1 C 0 C 0 s otoGar3.GL873658 961298 144 + 5252280 TTCACTGTCCCAAGGTGCTAGACACAGGAACATGCAAGGCACAAGTGAAG---GGGCAGCAGCTGGGTAGCCGGT-GGCAAGGGAGCCCAC--GTGCCCTGTGGTCTG-TC-------------------TGCATGTGCTGTCTGTCCTATGG----------------------------CGACCACGCTCTG--CCTG-- i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90046392 96 - 120129022 TTTATGACTGCAAA---------------------------------------------------AG-CCTGGCT----AAGGAAACCTGTACCTGTTCT-CAGCCTG-CCTGGGTGGA----CCTCCTGAATATGAG----CTGACATAATA----------------------------------------GTTCACAGG i mm10.chr12 C 0 C 0 e aotNan1.NW_018513311v1 182385 101 + 287728 I e saiBol1.JH378218 1269895 4 - 7082604 I e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e dasNov3.JH576208 1791721 279 + 4416731 I e calJac3.chr14 1440911 2 - 108792865 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=478282.000000 s hg38.chr2_KI270774v1_alt 181642 94 + 223625 ACGTTGCTCAT-CTGTCTCCTAAGTGAGGAATGCTCCTTCAGCCTCCTGTAGACCATCCTA----TGCCATCAAAATCACT-----------------CTTCTGTTCTTGAAATTT s panTro5.chr2A 1478487 94 + 111504155 ACGTTGCTCAT-CTGTCTCCTAAGTGAGGAATGCTCCTCCAGCCTCCTGTAGAACATCCTA----TGCCATCAAAATCACT-----------------CTTCTGTTCTTGAAATTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1417279 94 + 114371477 ACGTTGCTCAT-CTGTCTCCTAAGTGAGGAATGCTCCTCCAGCCTCCTGTAGAACATCCTA----TGCCATCAAAATCACT-----------------CTTCTGTTCTTGAAATTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1441672 94 + 1464242 ACGTTGCTCAT-CTGTCTCCTAAGTGAGGAATGCTCCTGCAGCCTCCTGTAGACCATCCTA----TGCCATCAAAATCACT-----------------CTTCTGTTCTTGAAATTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1166538 94 + 81552678 ACGTTGCTCGT-CTGTCTCCTAAATGAGGAATGCTCCTCCAGCCTCCTCTAGACCATCCTA----TGCCATCAAAATCACT-----------------CTTCTGTTCTTTCTTTTT i nomLeu3.chr19 C 0 I 1221 s rheMac8.chr13 1493859 93 + 108979918 ACTTT-CTCAT-CTGTCTCCTAAACGAGGAATGCTCCTCCAGCCTCCTCTAGACCATCCTA----TGCCATCAAAATCACT-----------------CTTTTGTTATTGAAGTCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1466293 93 - 111193037 ACTTT-CTCAT-CTGTCTCCTAAACGAGGAATGCTCCTCCAGCCTCCTCTAGACCATCCTA----TGCCATCAAAATCACT-----------------CTTTTGTTATTGAAGTCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1494671 93 + 3644372 ACTTT-CTCAT-CTGTCTCCTAAACGAGGAATGCTCCTCCAGCCTCCTCTAGACCATCCTA----TGCCATCAAAATCACT-----------------CTTTTGTTATTGAAGTCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1448877 93 - 10304083 ACTTT-CTCAT-CTGTCTCCTAAACGAGGAATGCTCCTCCAGCCTCCTCTAGACCATCCTA----TGCCATCAAAATCACT-----------------CTTCTGTTACTGAAATCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1528989 94 - 107702431 acTTTGCTCAT-CTGTCTCCTAAACGAGGAATGCTCCTCCAGCCTCCTCTAGACCATCCTG----TGCCATCAAAATCACT-----------------CTTCTGTTACTGAAATCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1021369 93 - 2200435 acttt-ctcat-ctgtcTCCTAAACGAGGAATGCTCCTCCAGCCTCCTCTAGACCATCCTA----TGCCATCAAAATCACT-----------------CTTTTGTTATTGAAGTCT i manLeu1.NW_012103754v1 C 0 C 0 s otoGar3.GL873658 961442 86 + 5252280 ------TCCAG-ACGTCTCCTCCACGTGG--TGGTCCTTCTGGCCCCCTGAGTTTTACAAA----TGTCATCAAAATCATT-----------------CTCCTATTTCTGAAATTT i otoGar3.GL873658 C 0 I 16 s mm10.chr12 90046488 111 - 120129022 GCTCCTCTTAG-ATGAAATTTAAAAGTAGGACACCCATCCTGCTTCCACCAGACAGTTTTA----TGTCATAGAGGTCACTGGGGTTTTTATCGCCAGCCCACATCCTTCAGCTGT i mm10.chr12 C 0 C 0 s dasNov3.JH576208 1792000 97 + 4416731 acgttgcttatcctatttcctaaatctggaatgtctttc--gactcctcTAGGCAATCTTAGATCTGCCATCAAACTCATT-----------------CATTTATTTCAGAATTCT i dasNov3.JH576208 I 279 C 0 e aotNan1.NW_018513311v1 182385 101 + 287728 I e saiBol1.JH378218 1269895 4 - 7082604 I e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e calJac3.chr14 1440911 2 - 108792865 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=29592.000000 s hg38.chr2_KI270774v1_alt 181736 5 + 223625 TTTCA s panTro5.chr2A 1478581 5 + 111504155 TTTCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1417373 5 + 114371477 TTTCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1441766 5 + 1464242 TTTCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1167853 5 + 81552678 tttCA i nomLeu3.chr19 I 1221 C 0 s rheMac8.chr13 1493952 5 + 108979918 TTTCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1466386 5 - 111193037 TTTCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1494764 5 + 3644372 TTTCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1448970 5 - 10304083 TTTCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1529083 5 - 107702431 TTTCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1021462 5 - 2200435 TTTCA i manLeu1.NW_012103754v1 C 0 C 0 s otoGar3.GL873658 961544 5 + 5252280 CATCT i otoGar3.GL873658 I 16 C 0 s dasNov3.JH576208 1792097 5 + 4416731 TTTCA i dasNov3.JH576208 C 0 I 1224 e aotNan1.NW_018513311v1 182385 101 + 287728 I e mm10.chr12 90046599 0 - 120129022 C e saiBol1.JH378218 1269895 4 - 7082604 I e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e calJac3.chr14 1440911 2 - 108792865 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=1995846.000000 s hg38.chr2_KI270774v1_alt 181741 548 + 223625 TTTATCTTCCTTGATTTTT-AGTCCAACAATTAACAGCTGTCTGAAGTTAA----------------GATCCATTGTAA--------GAAGGACT------------------------ATTTCTGAACCAGTCTGGGTGCTCCCCAGGGTGCAGGGGCCTGTCTCGGCATGGTGCGTGCACAGCAGCCAGT--GCTCCTGGTGGGCTCCCTGGCT----GCAG---CAACATC-----------ACCAAGGAGCTTATCACACCTGCGGCGTCTGGGGCCACCACAATCCCTGAG-----------TCAGGGCTgcagcaacaacatcaccaaggagcttattacacctgtggtgtctgggg------caccacaatccctgcgtcagaatccacactcttcacaagaccccatgagactgtgtatatgaaggtctgagaCACCCATCGGCCA-----ACCCTAACTCATCCTGTCTTCTCTCTCTAGTTCACTAACTTGGGCCCAACTTCATGTTCTCCTGCCACAGACATTTCCGTAGCCATTTAATCTGTCTCCc-aaattgctgagcctctgtgtgcctccacggtttcaaatgtgaaatgaggacaggaataAG-------------GCATTGATTTAAATTAGTTA- s panTro5.chr2A 1478586 478 + 111504155 TTTATCTTCCTTGATTTTT-AGTCCAACAATTAACAGCTGTCTGAAGTTAA----------------GATCCATTGTAA--------GCAGGACT------------------------ATTTCTGAACCAGTCTGGATGCTCCCCAGGGTGCAGGGGCCTGTCTCAGCATGGTGCGTGCACAGCAGCCAGT--GCTCCTGgtgggctccct---------------------------------------------------------------------------------------------------ggctgcagcaacaatatcacgaaggagcttattacacctgcggtgtctggggc-----caccacaa-ccccgagtcagaatccacactcttcacaagaccccatgagactgtgtatatgaaggtctgagaCACCCATCGGCCA-----ACCCTAACTCATCCTGTCTTCTCTCTCTAGTTCACTAACTTGGGCCCAACTCCATGTTCTCCTGCCACAGACATTTCCGTAGCCATTTAATCTGTCTCCc-aaattgctgagcctctgtgtgcctccacggtttcaaatgtgaaatgaggacaggaataAG-------------GCATTGATTTAAATTAGTTA- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1417378 548 + 114371477 TTTATCTTCCTTGATTTTT-AGTCCAACAATTAACAGCTGTCTGAAGTTAA----------------GATCCATTGTAA--------GCAGGACT------------------------ATTTCTGAACCAGTCTGGATGCTCCCCAGGGTGCAGGGGCCTGTCTCAGCATGGTGCGTGCACAGCAGCCAGT--GCTCCTGGTGGGCTCCCTGGCT----GCAG---CAACATC-----------ACCAAGGAGCTTATCACACCTGCGGCTTCTGGGGCCACCACAATCCCTGAG-----------TCAGGGCTgcagcaacaatatcatgaaggagcttattacacctgcggtgtctggggc-----caccacaa-ccccgagtcagaatccacactcttcacaagaccccatgagactgtgtatatgaaggtctgagaCACCCATCGGCCA-----ACCCTAACTCATCCTGTCTTCTCTCTCTAGTTCACTAACTTGGGCCCAACTCCATGTTCTCCTGCCACAGACATTTCCGTAGCCATTTAATCTGTCTCCc-aaattgctgagcctctgtgtgcctccacggtttcaaatgtgaaatgaggacaggaataAG-------------GCATTGATTTAAATTAGTTA- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1441771 479 + 1464242 TTTATCTTCCTTGATTTTT-AGTCCAACAATTAACAACTGTCTGAAGTTAA----------------GATCCATTGTAA--------GAAGGACT------------------------ATTTCTGAACCAGTCTGGGTGCTCCCCAGGGTGCAGGGGCGTGTCTCAGCATCGTCCGTGCACAGCAGCCAGT--GCTCCTGgtgggctccct---------------------------------------------------------------------------------------------------ggctgcagcaacaacatcaccaaggagcttattacacctgcggcatctggggc-----caccacgatccctgcgtcagaatccacactcttcacaagaccccagtagactgtgtatatgaaggtctgagaCACCCATTGGCCA-----ACCCTAACTCATCCTGTCTTCTCTCTCTAGTTCACTAACTTGGGCCCAACTTCATGTTCTCCTGCCACAGACATCTCCGTAGCCATTTAATCTGTCTCTc-aaattgctgagcctctgtgtgcctccacggtttcaaatgtgaaatgaggacaggaataAG-------------GCATTGATTTAAATTAGTTA- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1167858 475 + 81552678 TTTATCTTCCTTGATTTTT-AGTCCAACAATTAACAGCTGTCTGAAGTTAA----------------GATCCATTGTAA--------GAAGGACT------------------------ATTTCTCAACCAGTCTGGGTGCTCCCGAGGGTGCAGGAGTGTTTCTCAGCATGGTCCATGCACAGCAGCCAGT--GCTCCTGGCAGGCTCCCC---------------------------------------------------------------------------------------------------GGCTgcagcaacaacatcaccaagcagcttattacacctgcggcatctggggc-----caccacaatccctgagtcagaatccacactcttcacaagaccccattagactgtgtatgtgaaggtctgagaCACGCGTCGGCCA-----ACCCTAACTC-----GTCTTCTCTCTCTAGTTCACTAACTTGGGCCCAACTTCATGTTCTCCTGCCACAGACATTTCAGTAGCCATTTAATCTGTCTCCCAAAAGTGCTGAGCCTTTGTGTGCCTCCACGTTTTCAAATGCGAAGTGAGGACGGGAATAAG-------------GCATCGATTTAAATTAGTTA- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1493957 480 + 108979918 TTTATCTTCCTTGATTTTT-AGTCCAACAGTTAACAGCTGTCTAAAGTTAA----------------GATCTGTTGTTA--------GAAGGACT------------------------ATTTCTGAACCAGTCTGGGTACTCCCCAGGGTGTAGGAGTGTTTCTCAGTGTGGTCCGTGCACAGGAGCTGGT--GCTCCTGGCGGGTTCCCTGGCT-gcagcag---caacgtc-----------accaggg------------------------------------------------------------------------------------agcttgttagacctgcggcgtctggggcc---ccgccacaatccctgagtcagaatccacacacttcacaagaccccGTTAGACTGTGTATGTGAAGGTCCAAGACGCCCATCGGCCA-----ACCCTAACTCATTCTCTCTTCTCTCTGTAGTTcactgactcgggcccaacttcatgttctcctgccacggccatttcagtagccatttaatctgtctcccaaaattgctgagtctc--tgcgcctccaggttttcaaacgttaaatgaggacaggaataAG-------------GCATCAATTTAAATTAGTTA- i rheMac8.chr13 C 0 I 1 s macFas5.chr13 1466391 480 - 111193037 TTTATCTTCCTTGATTTTT-AGTCCAACAGTTAACAGCTGTCTAAAGTTAA----------------GATCTGTTGTTA--------GAAGGACT------------------------ATTTCTGAACCAGTCTGGGTACTCCCCAGGGTGTAGGAGTGTTTCTCAGTGTGGTCCGTGCACAGGAGCTGGT--GCTCCTGGCGggttccctggct-gcagcag---caacgtc-----------accaggg------------------------------------------------------------------------------------agcttgttagacctgcggcgtctggggcc---ctgccacaatccctgagtcagaatccacacacttcacaagaccccGTTAGACTGTGTATGTGAAGGTCCAAGACGCCCATCGGCCA-----ACCCTAACTCATTCTCTCTTCTCTCTGTAGTTCACTGACTCGGGCCCAACTTCATGTTCTCCTGCCACGGCCATTTCAGTAGCCATTTAATCTGTCTCCCAAAATTGCTGAGTCTC--TGCGCCTCCAGGTTTTCAAACATTAAATGAGGACAGGAATAAG-------------GCATCAATTTAAATTAGTTA- i macFas5.chr13 C 0 I 1 s macNem1.NW_012011978v1 1494769 480 + 3644372 TTTATCTTCCTTGATTTTT-AGTCCAACAGTTAACAGCTGTCTAAAGTTAA----------------GATCTGTTGTTA--------GGAGGACT------------------------ATTTCTGAACCAGTCTGGGTACTCCCCAGGGTGTAGGAGTGTTTCTCAGTGTGGTCCGTGCACAGGAGCTGGT--GCTCCTGGCGGGTTCCCTGGCT-gcagcag---caacgtc-----------accaggg------------------------------------------------------------------------------------agcttgttagacctgcggcgtctggggcc---ccgccacaatccctgagtcagaatccacacacttcacaagacccTGTTAGACTGTGTATGTGAAGGTCCAAGACGCCCATCGGCCA-----ACCCTAACTCATTCTCTCTTCTCTCTGTAGTTcactgactcgggcccaacttcatgttctcctgccacggccatttcagtagccatttaatctgtctcccaaaattgctgagtctc--tgcgcctccaggttttcaaacgttaaatgaggacaggaataAG-------------GCATCAATTTAAATTAGTTA- i macNem1.NW_012011978v1 C 0 I 312 s cerAty1.NW_012000820v1 1448975 479 - 10304083 TTTATCTTCCTTGATTTTT-AGTCCAACAGTTAACAGCTGTCTAAGGTTAA----------------GATCCGTAGTTA--------GAAGGACT------------------------ATTTCTGAACC-GTCTGGGTACTCCCCAGGGTGTAGGACTGTTTCTCAGTGTGGTCCGTGCACAGGAGCCGGT--GCTCCTGGCGGATtccctggct-gcagcag---caacgtc-----------accaggg------------------------------------------------------------------------------------agcttgttagacctgcggcgtctggggcc---ccgccacaatccctgagtcagaatccacacacttcacaagaccccGTTAGACTGTGTATGTGAAGGTCCAAGACGCCCATCAGCCA-----ACCCTAACTCATTCTCTCTTCTCTCTGTAGTTCACTGACTCGGGCCCAACTTCATGTTCTCCCGCCACGGCCATTTCAGTAGCCATTTAATCTGTCTCCCAAAATTGCTGAGTCTC--TGCACCTCCAGGTTTTCAAACGTTAAATGAGGACAGGAATAAG-------------GCCTCAATTTAAATTAGTTA- i cerAty1.NW_012000820v1 C 0 I 1 s chlSab2.chr14 1529088 482 - 107702431 TTTATCTTCCTTGATTTTT-AGTCCAACAGTTAACAGCTGTCTAAAGTTAA----------------GATCCGTTGTTA--------GAAGGACT------------------------ATTTCTGAACCAGTCTGGGTACTCCCCAGGGTGCAGGAGTGTTTCTCAGCGTGGTCCGTGCACAGAAGCCCGT--GCTCCTGGCGggttccctggct-gcggcag---caacatc-----------accaggg------------------------------------------------------------------------------------agcttgttagacctgcggcgtctggggcc---tcgccacaatccctgagtcagaatccacacacttcacaagacccTGTTAGACTGTGTATGTGAAGGTCCAAGACACCCATCGGCCA-----ACCCTAACTCATTCTGTCTTCTCTCTCTGGTCCACTAACTTAGGCCCAACTTCATGTTCTCCTGCCACGGCCATTTCAGTAGCCATTTAATCTATCTCCCAAAATTGCTGAGTCTCTGTGCGCCTCCAGGTTTTCAAATGTTAAATGAGGACAGAAATAAG-------------GCATCAATGTAAATTAGTTA- i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012103754v1 1021467 480 - 2200435 TTTATCTTCCTTGATTTTT-AGTCCAACAGTTAACAGCTGTCTAAGGTTAA----------------GACCTGTTGTGA--------GAAGGACT------------------------ATTTCTGAACCAGTCTGGGTACTCCCCAGGGTGTAGGACTGTTTCTCAGCGTGGTCCGTGCACAGGAGCCGGT--GCTCCTGGCGGATTCCCTGGCT-gcagcag---caacgtc-----------accaggg------------------------------------------------------------------------------------agcttgttagacctgcggcgcctggggcc---ccgccacaatccctgagtcagaatccacacacttcacgagaccccGTTAGACTGTGTGTGTGAAGGTCCAAGACGCCCATCGGCCA-----ACCCTAACTCATTCTGTCTTCTCTCTGTAGTTCACTGACTCGGGCCCAACTTCATGTTCTCCTGCCACAGCCATTTCAGTAGCCATTTAATCTGTCTCCCAAAATTGCTGAGTCTC--TGCGCCTCCAGGTTTTCAAACGTTAAATGAGGACAGGAATGAG-------------GCATCAATTTAAATTAGTTA- i manLeu1.NW_012103754v1 C 0 I 1 s otoGar3.GL873658 961549 508 + 5252280 TTTTTCTTCCTTAATTTTTCATTCCCAAAAGTAGCAGCACCCTGGAGCTAA----------------GATCAGTCTCAC--------TAAGGACT------------------------GATTCT-AACCAGGCTGG-TGCTCCAGGGGACGTGAGAGCAGCCCATGGTCTGGCCCACATCCAGCAACAAGT--GCCCACGGCAGGCTCTGTGGATGGCAGAGA---CCAGGTC-----------ACCTAGA------------------------------TGGGAAGCTCTGTGGACAAGAGTACTACGGACGGCAGAGGCCGTGTCACTGGG-AACTTGTCAC--------CACCTCAGGC-----CACCCTAA--CTCGGGTCAGGAGCAGCAC-CATCCCAAAACCCTGTCAGAAAGT-CACATCAAAGCCTGGGTGCCCCTCTGGGCAGGGTGGCTCTG---------GGCCTCTTTGTGCAGCT-GCAGACGTGAGTCTTGTGTCACGCTCT-GTGCCTGGGCCTTTTCAGTAGCTATTGGCTGTGTCTCCCCAGATTACCCAGCCTCTGCCTGCC------------------AAGTGTGGAAGGGAGTAAATTTAAATTGGT--TCATCAATTTAAATTACTTA- i otoGar3.GL873658 C 0 I 1 s mm10.chr12 90046599 519 - 120129022 --TTTTATCCTAACTCTTT-ACTTCTAGAGTGCCTAGCTTCCTAAACTTAAAGAAGTTGTGTGGTACAATTAATGGTCACAAGGTACTAAGGACTTAGTTACCAGTTACCATTGGCTTAATTTCTAAGCT-TCCTGGGTGCTTCTAAT--TATAGGAGCATCAGGTGACATGGCC--TCAAATGCAACAAGTGAGCTCATAGTGTAGACGCGGTGA-GCAGAAGACCCGACATCCAACTTTTCAGACCAGCA------------------------------------------------------------------------------------GCCTTACAGGGCCAACGGT-TCTGAGATTAAATTGGCCTGGTCTCTGAGTCA-----------------------CTGCAAAGCCAAGTGTGTT-AGGAGTGAGGCACCCTCTGGGCA-----GTACTGACTG----TGACCTCTTTCTCCAGTGCAATAACTC---CACAGCTTCACACCAGATTG-----GCTCTTTCAGAAGCTAATTACTCTGCCccttaaggtcactcagcttactcctgcctccaactcttcaaatgtacagtgagaatagtcgtgggatccagctctttggtgtctgtttaaattgattaa i mm10.chr12 C 0 C 0 e aotNan1.NW_018513311v1 182385 101 + 287728 I e saiBol1.JH378218 1269895 4 - 7082604 I e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e dasNov3.JH576208 1792102 1224 + 4416731 I e calJac3.chr14 1440911 2 - 108792865 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=1911.000000 s hg38.chr2_KI270774v1_alt 182289 1 + 223625 T s panTro5.chr2A 1479064 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1417926 1 + 114371477 T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1442250 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1168333 1 + 81552678 T i nomLeu3.chr19 C 0 C 0 s otoGar3.GL873658 962058 1 + 5252280 T i otoGar3.GL873658 I 1 C 0 s mm10.chr12 90047118 1 - 120129022 t i mm10.chr12 C 0 C 0 e aotNan1.NW_018513311v1 182385 101 + 287728 I e saiBol1.JH378218 1269895 4 - 7082604 I e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e dasNov3.JH576208 1792102 1224 + 4416731 I e calJac3.chr14 1440911 2 - 108792865 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I e manLeu1.NW_012103754v1 1021947 1 - 2200435 I e chlSab2.chr14 1529570 1 - 107702431 I e cerAty1.NW_012000820v1 1449454 1 - 10304083 I e macNem1.NW_012011978v1 1495249 312 + 3644372 I e macFas5.chr13 1466871 1 - 111193037 I e rheMac8.chr13 1494437 1 + 108979918 I a score=402797.000000 s hg38.chr2_KI270774v1_alt 182290 96 + 223625 AAATGCACAGTACAAAGAGCGGGGTGCAGGCCTGTTGATATTAACACTGTGAGT---------GCTCAGGAGCCGTGTTCTGAA---TGCTGGGACA--------GCCACACCCAG s panTro5.chr2A 1479065 96 + 111504155 AAATGCACAGTACAAAGAGCGGGGTGCAGGCCTGTTGATATTAACACTGTGAGT---------GCTCAGGAGCCGTGTTCTGAA---TGCTGGGACA--------GCTGCACCCAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1417927 96 + 114371477 AAATGCACAGTACAAAGAGCGGGGTGCAGGCCTGTTGATATTAACACTGTGAGT---------GCTCAGGAGCCGTGTTCTGAA---TGCTGGGACA--------GCTGCACCCAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1442251 96 + 1464242 AAATGCACAGTACAAACAGCGGGGTGCAGGCCTGTTGATATTAACACTGTGAGT---------GCTCAGGAGCCGTGTTCCGAA---TGCTGGGACG--------GCCGCACCCAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1168334 94 + 81552678 AAATGCACAGTACAAAGAGCGGGGTGCAGGCCTGTGGTTATTAACACTGT--GT---------GCTCAGGAGCTGTGCTCTGAA---TGCCGGGACG--------GCCACACCCAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1494438 93 + 108979918 AAATGCACAGTACAAAGAGTGGGGCGCAGGCCTGTTG---TTGACACCGTGTGT---------GCCCAGGAGCCGTGCTCCAAA---TGCTGGGACA--------GCTGCACCCAG i rheMac8.chr13 I 1 C 0 s macFas5.chr13 1466872 93 - 111193037 AAATGCACAGTACAAAGAGTGGGGCGCAGGCCTGTTG---TTGACACCGTGTGT---------GCCCAGGAGCCGTGCTCCAAA---TGCTGGGACA--------GCTGCACCCAG i macFas5.chr13 I 1 C 0 s macNem1.NW_012011978v1 1495561 93 + 3644372 aaaTGCACAGTACAAAGAGTGGGGCGCAGGCCTGTTG---TTGACACTGTGTGT---------GCCCAGGAGCCGTGCTCCAAA---TGCTGGGACA--------GCTGCACCCAG i macNem1.NW_012011978v1 I 312 C 0 s cerAty1.NW_012000820v1 1449455 93 - 10304083 AAATGCACAGTACAAAGAGTGGGGCGCAGGCCTGTTG---TTGACACCGTGCGT---------GCCCAGGCGCCGTGCTCCGAA---TGCTGGGACA--------GCTGCACCCAG i cerAty1.NW_012000820v1 I 1 C 0 s chlSab2.chr14 1529571 91 - 107702431 AAATGCACAGT--AAAGAGTGGGGTGCAGGCCTGTTG---TTGACACCGTGCGT---------GCCCAGGAGCCGTGCTCCGAA---TGCTGGGACA--------GCTGCACCCAG i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012103754v1 1021948 88 - 2200435 AAATGCAC-----AAAGAGTGGGGCGCAGGCCTGTTG---ATGACACCGTGCGT---------GCCCAGGCGCCGTGCTCCGAA---TGCTGGGACA--------GCTGCACCCAG i manLeu1.NW_012103754v1 I 1 C 0 s otoGar3.GL873658 962059 115 + 5252280 AAATGTGCAATACAGAGAACAAGTCACAGACCTTTTGTGATCAACGTAGAAAGTTAAAAAGTAAGTAAAAAGCCATGGTCAAAACTGTGCTGACCCATAAACTCCGCTG-ACCCAT i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90047119 73 - 120129022 gagtgtacaacatcaagaaca------aggcctagtg-------ccctttcagc---------ac------gccatg----aaA---TACCATGCTG--------AATACATTAAG i mm10.chr12 C 0 C 0 e aotNan1.NW_018513311v1 182385 101 + 287728 I e saiBol1.JH378218 1269895 4 - 7082604 I e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e dasNov3.JH576208 1792102 1224 + 4416731 I e calJac3.chr14 1440911 2 - 108792865 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=3238357.000000 s hg38.chr2_KI270774v1_alt 182386 650 + 223625 AACAATTACACTACAC------------------AGTTAGCAGGGCGTCTGTTGACTTGGAAGAGTG----------TTG----------GTGACATGTCACTCAATAAGCA-TGTAAGCTACACAGCAATGTGTACA-T-----TGGGAATCTGTTCGGGTTTTTTTTAAAGCAGTGGGCCACA-------GGCACACACATCACTTTGATGAGTGTCCTCCCGAA--TGTGAGG---GGAGCGCTAGGCTCTGCTCCAGAACCTGTTAATACTGGAGACCTCGGCAGCCTGAGATGGGGACAGGT----AGGAGAGATTGCTAAC-CTTCATCAATACAACTCTTTTTTTTG-TTTGTTTTATCATATCTGTAATTAAAATA---TATCTT----AGAGATAAATGA----C--AAAACTCCA----------AAA---------TCT----GGTACAA----ATGC--------G------TGTGCACAGATATTTTTACTACAGCTGTTCCCTGCACTAGAAGTTTC---AAAATCGAGAATCACAAGGGAAAAAAC-------TCAAGTATAACAGACAGGAAA--C--TTTACGTTTATGGTAAATTGATAAGAATATAAGCACTCAAGGAGATCCTCAGTGAAA---CCTCATC--AACACATCTGCGGCTACAGAAAGGAAGGCTACGGGCTTAACTGAATATTTGATACAGAAAAACAAATAGTATTCGCTGCTCTCTTCTCTATTCAAATTCTACTTATTCACTCAAACTCATTCA s panTro5.chr2A 1479161 648 + 111504155 AACAATTACACT--GC------------------AGTTAGCAGGGCGTCTGTTGACTTGGAAGAGTG----------TTG----------GTGACATGTCACTCAATAAGCA-TGTAAGCTACACAGCAATGTGTGCA-T-----TGGGAATCTGTTCGGGTTTTTTTTAAAGCAGTGGGCCACA-------GGCACACACATCACTTTGATGAGTGTCCTCCCGAA--TGTGAGG---GGAGCGCTAGGCTCTGCTCCAGAACCTGTTAATACTGGAGACCTTGGCAGCCTGAGATGGGGACAGGG----AGGAGAGATTGCTAAC-CTTCATCGATACAACTCTTTTTTTTG-TTTGTTTTATCATATCTGTAATTAAAATA---TATCTT----AGAGATAAATGA----C--AAAACTCCA----------AAA---------TCT----GGTACAA----ATGC--------G------TGTGCACAGATATTTTTACCACAGCTGTTCCCTGCACTAGAAGTTTC---AAAATCGAGAATCACAAGGGAAAAAAC-------TCAAGTATAACAGACAGGAAA--C--TTTACGTTTATGGTAAATTGATAAGAATATAAGCACTCAAGGAGATCCTCAGTGAAA---CCTCATC--AACACAGCTATGGCTACAGAAAGGAAGGCTACAGGCTTAACTGAATATTTGATACAGAAAAACAAATAGTATTCGCTGCTCTCTTCTCTGTTCAAATTCTACTTATTCACTCAAACTCATTCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1418023 649 + 114371477 AACAATTACACTGCAC------------------AGTTAGCAGGGCGTCTGTTGACTTGGAAGAGTG----------TTG----------GTGACATGTCACTCAATAAGCA-TGTAAGCTACACAGCAATGTGTGCA-T-----TGGGAATCTGTTCGGGTTTTTTTTAAAGCAGTGGGCCACA-------GGCACACACATCACTTTGATGAGTGTCCTCCCGAA--TGTGAGG---GGAGCGCTAGGCTCTGCTCCAGAACCTGTTAATACTGGAGACCTCGGCAGCCTGAGATGGGGACAGGG----AGGAGAGATTGCTAAC-CTTCATCGATACAACTC-TTTTTTTG-TTTGTTTTATCATATCTGTAATTAAAATA---TATCTT----AGAGATAAATGA----C--AAAACTCCA----------AAA---------TCT----GGTACAA----ATGC--------G------TGTGCACAGATATTTTTACCACAGCTGTTCCCTGCACTAGAAGTTTC---AAAATCGAGAATCACAAGGGAAAAAAC-------TCAAGTATAACAGACAGGAAA--C--TTTACGTTTATGGTAAATTGATAAGAATATAAGCACTCAAGGAGATCCTCAGTGAAA---CCTCATC--AACACAGCTACGGCTACAGAAAGGAAGGCTACAGGCTTAACTGAATATTTGATACAGAAAAACAAATAGTATTCGCTGCTCTCTTCTCTGTTCAAATTCTACTTATTCACTCAAACTCATTCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1442347 644 + 1464242 AACAATTACACTACAC------------------AGTTAGCAGGGCGTCTGTTGACTTGGAAGAGTG----------TTG----------GTGACATGTCACTCAATAAGCA-TGTAAGCTACACAGCAATGTGTGCA-T-----TGGGAATCTGTTCGGGTTTTTTTTAAAGCAGTGGGCCACA-------GGCACACACATCACTTTGATGAGTGTCCTCCCGAA--TGTGAGG---GGAGCACTAGGCTCTGCTCCAGAACCTGTTAATACTGGAGACCTCGGCAGCCTGAGATGGGGACAGGG----AGGAGAGATTGCTAAC-CTTCATCGATACAACTCTTTTTTTTG-TTTGTTTTATCATATCTGTAATTAAAATA---TATCTA----AGAGATAAATGA----C--AAAACTCCA----------AAA---------TCT----GGTACAA----ATGC--------G------TGTGCACAGATATTTTTACCACAGCTGTTCCCTGCACTAGAAGTTTC---AAAATTGAGAATCACAAGGGAAAAAAC-------TCAAGTATAACAGACAGGAAA--C--------TTTATGGTAAATTGATAAGAATATAAGCACTCAAGGAGATCCTCAGTGAAA---CCTCATC--AACACATCTGCGGCTACAGAAAGGAAGGCTATGGGCTTAACTGAATATTTGATACAGAAAAACAAATAGTATTCGCTGCTCTCTTCTCTATTCAAATTCTACTTATTCACTCAAACTCATTCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1168428 642 + 81552678 AACCATTGCGCT--GC------------------AGTTAGCAGGGTGTCTGTTGACTTGGAAGAGTG----------TTG----------GTGACAAGTCACTCAATAAACA-TGTAAGCTACACAGCAATGTGTGCATT-----TGGGAATCTGTTCAGGTTTTTTTTTAAGCAGTGGGCCACC-------GGCACACACATCACTTTGATGAGTGTCCTCCTGAA--TGGGAGG---GGAGCCCTAGGCTCTGCCCCAGAACCTGTGAATACTGGAGACCTCAGCAGCCTGAGATGGGAACAGGG----AGGAGAGACTGCTAAC-CTTCATCGATACAACTC-TTTTTTTG-TTCGTTTTATCACATCTATAATTAAAATA---TATCTT----AGAAATAAATGA----C--AAAACTCAA----------AAC---------TCT----GGTACAA----ATGC--------G------TGTGCACAAATATTTTTACCACAGCTGTTCCCTGCACTAGAAGTTTC---AAAATCAAGAATCACAAGGGAAA-------------AAGTATAACAGACAGGAAG--C--TTTACGTTTATGCTAAATTGATAAGAATATACGTACTCAAGGAGATCCTCAGTGAAA---CCTCATC--AACACGTCTGTGGCTACAGAAAGGAAGGCTGCGGGCTTAACTGAATATTTAATACAGTAAAACGAATAGTATTTGCTGCTCTCTTCTCTACTCAAATTCTACTTATTCACTCAAACTCATTCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1494531 649 + 108979918 AACAGTTACGCTGCAC------------------AGTTAGCAGGACGTCCGCTGACTTGGAGGAGTG----------TTG----------GTGACACGTCACTCAATGAACG-TGCAGGCTACACAGCAGTGTGTGCA-C-----TGGGAATCCATTCAGG-TGTTTTTAAAGCAGTGGGTCACG-------GGCACACACATCACTTTGATGAGTGTCCTCCCGAA--TGCAAGG---GGAGCGCTAGGGTCTGCTCCAGAACCTGTTCATACTGGAGACCTCGGCAGCCTGCCATGGGAACAGGG----AGGAGGGATTGCTGAC-ATGCAGCAATACGACTCTTTTTCTTGTTTTTTTTTATCACATCTATAATTAAAATA---TGTCTT----AGAAATAAATGA----C--AAAACTCAA----------AAA---------TCT----GGTACAA----GTGC--------A------TATGCACAAATATTTTTACCACAGCAATTCCCTGCACTAGAAGTTTC---AAAATCAAGAATCACAAGGGAAAAAAA-------TCAAGTATAAGAGAGAGGAAA--C--TTTACATTTACGGTAAATTGACAAGAATGTAAGTACTCAAGCAGGTCCTCAGTGAAATCTCCTCATC--AACATGTCTGCGGCTCCAGAAAGGAAGGCTGTGGACTTAACTGAATA----ATATAGAAAAACAAATAGTATTTGCTGCTCTCTTCTCTATTCAAATTCTACTTATTCACTAAAACTCATCCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1466965 648 - 111193037 AACAGTTACGCTGCAC------------------AGTTAGCAGGACGTCCGCTGACTTGGAGGAGTG----------TTG----------GTGACACGTCACTCAATGAACG-TGCAGGCTACACAGCAGTGTGTGCA-C-----TGGGAATCCATTCAGG-TGTTTTTAAAGCAGTGGGTCACG-------GGCACACACATCACTTTGATGAGTGTCCTCCCGAA--TGCAAGG---GGAGCGCTAGGCTCTGCTCCAGAGCCTGTTCATACTGGAGACCTCGGCAGCCTGCCATGGGAACAGGG----AGGAGGGATTGCTGAC-ATGCAGCAATACGACTCTTTTTCTTG-TTTTTTTTATCACATCTATAATTGAAATA---TGTCTT----AGAAATAAATGA----C--AAAACTCAA----------AAA---------TCT----GGTACAA----GTGC--------A------TATGCACAAATATTTTTACCACAGCTATTCCCTGCACTAGAAGTTTC---AAAATCAAGAATCACAAGGGAAAAAAA-------TCAAGTATAAGAGAGAGGAAA--C--TTTACATTTACGGTAAATTGACAAGAATGTAAGTACTCAAGCAGGTCCTCAGTGAAATCTCCTCATC--AACATGTCTGCGGCTCCAGAAAGGAAGGCTGTGGACTTAACTGAATA----ATATAGAAAAAGAAATAGTATTTGCTGCTCTCTTCTCTATTCAAATTCTACTTATTCACTAAAACTCATCCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1495654 649 + 3644372 AACAGTTACGCTGCAC------------------AGTTAGCAGGACGTCTGCTGACTTGGAGGAGTG----------TTG----------GTGACACGTCACTCAATGAACG-TGCAGGCTACACAGCAGTGTGTGCA-C-----TGGGAATCCATTCAGG-TGTTTTTAAAGCAGTGGGTCACG-------GGCACACACATCACTTTGATGAGTGTCCTCCCGAA--TGCAAGG---GGAGCGCTAGGCTCTGCTCCAGAGCCTGTTCATACTGGAGACCTCGGCAGCCTGCCATGGGAACAGGG----AGGAGGGATTGCTGAC-ATGCAGCAATACGACTCTTTTTCTTGTTTTTTTTTATCACATCTATAATTAAAATA---TGTCTT----AGAAATAAATGA----C--AAAACTCAA----------AAA---------TCT----GGTACAA----GTGC--------A------TATGCACAAATATTTTTACCACAGCTATTCCCTGCACTAGAAGTTTC---AAAATCAAGAATCACAAGGGAAAAAAA-------TCAAGTATAAGAGAGAGGAAA--C--TTTACATTTACGGTAAATTGACAAGAATGTAAGTACTCAAGCAGGTCCTCAGTGAAATCTCCTCATC--AACATGTCTGCGGCTCCAGAAAGGAAGGCTGTGGACTTAACTGAATA----ATATAGAAAAACAAATAGTATTTGCTGCTCTCTTCTCTATTCAAATTCTACTTATTCACTAGAACTCATCCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1449548 658 - 10304083 AACAGTTACGCTGCAC------------------AGTTAGCAGGGCGTCCGCTGACTTGGAGGAGTG----------TTGGTGACACTTAGTGACACGTCACTCAATGAACA-TGCAGGCTGCACAGCAGTGTGTGCA-C-----TGGGAATCCGTTCAGG-TGTTTTTAAAGCAGTGGGCCACG-------GGCACACACATCACTTTGATGAGTGTCCTCCCGAA--TGCGAGG---GGAGCGCTAGGCTGTGCTCCAGAGCCTGTTCATACTGGAGACCTTGGCAGCCTGCCATGGGAACAGGG----AGGAGGGATTGCCGAC-CTGCAGCGATATGACTCTTTTTCTTG-TTTGTTTTATCACATCTATAATTAAAATA---TGTCTT----AGAAATAAATGA----C--AAAACTCAA----------AAA---------TCT----GGTACAA----GTGC--------A------TGTGCACAAATATTTTTACCACAGCTATTCCCTGCACTAGAAGTTTC---AAAATCAAGAATCACAAGGGAAAAAAA-------TCAAATATAAGAGAGAGGAAA--C--TTTACGTTTATGGTAAATTGACAAGAATGTAAGTACTCAAGCAGGTCCTCAGTGAAATCTCCTCATC--AACATGTCTGCGGCTCCAGAAAGGAAGGCTGTGGACTTAACTGAATA----ATATAGAAAAACAAATAGTATTTGCTGCTCTCTTCTCTATTCAAATTCTACTTATTTACTCAAACTCATCCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1529662 648 - 107702431 AACAATTATGCTGCAC------------------AGTTAGCAGGGCGTCTGCTGACTTGGAAGAGTG----------TTG----------GTGACATGTCACTCAGTAAACA-TGCAGGCTGCACAGCAGTGTGTGCA-C-----TGGGAATCCGTTCAGG-TGTTTTTAAAGCAGTGGGCCACG-------GGCACACACGTCACTTTGATGAGTGTCCTCCCGAA--TGCGAGG---GGAGCGCTAGGCGCTGCTCCAGAGCCTGTTCATACTGGAGACCTCGGCAGCCTGCGATGGGAACAGGG----AGGAGGGATTGCCGAC-CTGCAGCGATACAACTCTTTTTCTTG-TTTGTTTTATCAGATCTATAATTAAAATA---TGTCCT----AGAAATAAATGA----C--AAAACTCAA----------AAA---------TCT----GGTACAA----GTGC--------A------TGTGCACAAATATTTTTACCACAGCTATTCCCTGCACTAGAAGTTTC---AAAATCAAGAATCACAAGGGAAAAACA-------TCAAATATAAGAGAGAGGAAA--C--TTTACGTTTATGGTAAATTGACAAGAATGTAAGTACTCAAGCAGGTCCTCAGTGAAATCTCCTCATC--AACACGTCTGCGGCTCCAGAAAGGAAGGCTGTGGACTTAACTGAATA----ATATAGAAAAATAAATAGTATTTGTTGCTCTCTTCTCTATTCAAATTCTACTTATTCACTCAAACTCATCCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1022036 652 - 2200435 AACAGTTACGCTGCAC------------------AGTTAGCAGGGCGTCCGCTGACTTGGAAGAGTGTTGGTGACACTTG----------GTGACACATCACTCAATAAATG-TGCAGGCTGCACAGCAGTGTGTGCA-C-----TGGGAATCCGTTCAGG-TGTTTTTAAAGCAGTGGGCCACG-------GGCACACACATCACTTTGATGAGTGTCCTCCCGAA--TGCGAGG---GGAGCGCTAGGCTGTGCTCCAGAGCCTGTTCATACTGGAGACCTCGGCAGCCTGCCATGGGAACAGGG----AGGAGGGATTGCTGAC-CTGCAGCAATACGACTCTTTTTCTTG-TTTGTTTTATCACATCTATAATTAAAATA---TGTCTT----AGAAATAAATGA----C--AAAACTCAA----------AAA---------TCT----GGTACAA----GTGC--------A------TGTGCACAAATATTTTTACCACAGCTATTCCCTGCACTAGAAGTTTC---AAAATCAAGAATCACAAGGGAAAAAAA-------TC------AAGAGAGAGGAAA--C--TTTACATTTACGGTAAATTGACAAGAATGTAAGTACTCAAGCAGGTCCTCAGTGAAATCTCCTCATC--AACATGTCTGCGGCTCCAGAAAGGAAGGCTGTGGACTTAACTGAATA----ATATAGAAAAACAAATAGTATTTGCTGTTCTCTTCTCTATTCAAATTCTACTTATTCACTAAAACTCATCCA i manLeu1.NW_012103754v1 C 0 C 0 s otoGar3.GL873658 962174 693 + 5252280 AA--ACTCCGCTGACCCTTGCCATGACTGCTGTAGATTAGCAGCATGCCCA-GGACCCCGGAGTGAG----------GTC----------TCAACACACCGCTGAGTAAACA-CGCAAGTGACAGGGTATGGAGTGTT-T-----TGAGAATCCATTTAGA-TTTTTTAAATGGAGTGGA-CACA-------TTTATGTGTATCTTATTTATAAGTGTCTTCACAAA--T----TG---AAAGCTCTGGGCACTACTCAAGAG--TGTTAGTACCAGTCACCTCAGCAGACTGGAGTGGCAGAAGGG----AGCTGAGATTTTCAACTTTTTGTCTATCCAGGTC--TTTGGTG-TATGGCCTATTACATCTATAACTAAAATACACTATCTTATGAAAAAACAAATTA----CAGAAAACTCAA----------TAAGGAAAAATGCAT----GGTATAA----ACAC--------ACTCATTTACATACACAAATGTTTGCCATAACTATTTCTTTCACTAGAATTTTCTTGCAAATCAAGAATTGCAAGAAAAAAAAAATAG-GGTCAAGTACACCATCCAGGGAAATC--CCCACTTTTATGGTAAATTCGTAGGAATATAAGTGTTCAAGCTCATCCTCAGTGAAATGTGCTTATCAAAATATATCCACAGCTTCAGAAAGGAAACCT-CGGGCCTAATTGAATTTTTAATACA-AAAAGCAAATGAGATTTGCCACTCTCTTCTCCACTC-AATCCTACTTATTCACTAAAATCCATCCA i otoGar3.GL873658 C 0 C 0 s mm10.chr12 90047192 608 - 120129022 GAGGGT---------C------------------TGCTAGTA------CTGTAGACC---AAGTTTA----------CCC----------AAGATATTCTACTGAACGAAAA-CAGAAGTGACAGAGTCGTATGTATG-TCTATATGAGAATCCATTCTGATTTATTCAGAAGAAACGGTACCCATTTTCGTGGGATGCACA-------GATAAAGGTCTTCATGAGCTTGCAAAG---AACATGGCAGGA------CTGAGACCTTATAACAGCAGGAGTTTCTGCAGAGCAAGATGGGAAGAGGGAATAAAGAGAGACTGATTGT--TTTATGAATACAATCCATATTTTCT-GCCATCCTGTC---TTTATAA-----------TATTTT----GTACACAAATCA----T--GGAGGTGCATTGAG----GAAA---------CCTTCTAGGTGCAAAAATGTTC--------A------CACTTACAGGTGTCTACACTAAATCTTACTCCTA-ACTACATGTATC---CAAAGAAGGAATTACAAGGAAACAAAC-------T-----------------AAG--C--CTTTAAAGAATGATAGACTATCAA-----TGTGTGTCTAAACAG-TCTCCAGCCAGT--TGTGAATC--CACATGACT--GGCTACAGAAGGAAGAGTTACAAGCTTCAGTACTTG----ACATAGAAAATCCAATGAGATT--ATTTTATCTTCTCTGTTCAAATCCCATTTAGCCTCTAAAATCCATCta i mm10.chr12 C 0 N 0 s dasNov3.JH576208 1793326 664 + 4416731 aactatcatgcTAAGT-----------------AAATTAAAAGTGTTTATATTGACCTGGAATACTG----------TGC----------ATA-----------GGTAAAAACTGAAAATTATAGACTAATGCACACA-A-----TGAACACCCACTTCGA--TTTTGAAGAGCAGTGAGATATA-------TTTATGTGTATCATATTTACAAATGTTTTCATGAA--CATGAAGAAAGGAGTATCAGG----ACACAAGAGCTCATTATTATTAATTATCTCTGAAGAGTGAGATGGGAAGAGGA----AGAAGAGGTTCTCAAC-TTTCTTC-ATTCATATCTGTGTTTTG-TAGATATTA----ATC-----CTAAAATATACTATCTT----AAAAATAAACAAATTGC--AAAGCTTAATGGGGATAAAAGC---------CAT----GGAATAA----ATGCTCTCATTTA------TATAAACAAATATTTTCATCATGTCTATGCCCTACACTAGAAGT-TC---TAGATTAAGAATTACAAGGGAAAAAAACTAACTCTTAAATATACCAGAGGAAGAA--CTATTTATTTCTGTGGTAAAGTGATGTGAACCTAAGTGTTCAAGCTGATCCTCCATGAAATCAGCTTATC--AACATGTCTATGGCTGCAGAAAGGAAAGCTACAGGCTTAATTGAATATTTAATAAAGCAAATCAAATGAGATTTGCTGTACTCTTCTCTATTCAAATCCTACTTATCCACTAAAATCCATCCA i dasNov3.JH576208 I 1224 C 0 e aotNan1.NW_018513311v1 182385 101 + 287728 I e saiBol1.JH378218 1269895 4 - 7082604 I e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e calJac3.chr14 1440911 2 - 108792865 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=88145.000000 s hg38.chr2_KI270774v1_alt 183036 14 + 223625 CATAAAAACTTGAT s panTro5.chr2A 1479809 14 + 111504155 CATAAAAACTTGAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1418672 14 + 114371477 CATAAAAACTTGAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1442991 14 + 1464242 CATAAAAACTTGAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1169070 14 + 81552678 CATAAAAACTTGAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1495180 14 + 108979918 CATAAAAACTTGAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1467613 14 - 111193037 CATAAAAACTTGAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1496303 14 + 3644372 CATAAAAACTTGAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1450206 14 - 10304083 CACAAAACCTTGAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1530310 14 - 107702431 CATAAAATTTTGAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1022688 14 - 2200435 CATAAAAACTTGAT i manLeu1.NW_012103754v1 C 0 C 0 s otoGar3.GL873658 962867 14 + 5252280 TATAAAAACCTGAT i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1793990 14 + 4416731 CATAAAAATCTGAT i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 182385 101 + 287728 I e saiBol1.JH378218 1269895 4 - 7082604 I e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e calJac3.chr14 1440911 2 - 108792865 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=6006.000000 s hg38.chr2_KI270774v1_alt 183050 1 + 223625 A s panTro5.chr2A 1479823 1 + 111504155 A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1418686 1 + 114371477 A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1443005 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1169084 1 + 81552678 A i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1495194 1 + 108979918 A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1467627 1 - 111193037 A i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1496317 1 + 3644372 A i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1450220 1 - 10304083 A i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1530324 1 - 107702431 A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1022702 1 - 2200435 A i manLeu1.NW_012103754v1 C 0 C 0 s otoGar3.GL873658 962881 1 + 5252280 A i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 182385 101 + 287728 I e saiBol1.JH378218 1269895 4 - 7082604 I e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e dasNov3.JH576208 1794004 0 + 4416731 C e calJac3.chr14 1440911 2 - 108792865 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=476789.000000 s hg38.chr2_KI270774v1_alt 183051 105 + 223625 TTAAggccgggcgtggtggtttatgcctgtaatcccagcactttgggaggccgaggcaggtggatcatgaagtcaggagttcaacaccagcctggccaagatggt s panTro5.chr2A 1479824 105 + 111504155 TTAAggctgggcgtggtggcttatgcctgtaatcccagcactttgggaggccgaggcaggtggatcatgaagtcaggagttcaacaccagcctagccaagatggt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1418687 105 + 114371477 TTAAggctgggcgtggtggcttatgcctgtaatcccagcactttgggaggccgaggcaggtggatcatgaagtcaggagttcaacaccagcctagccaagatggt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1443006 105 + 1464242 TTAAgaccgggcgtggtggcttatgcctgtaatcccagcactttgggaggccgaggcaggtggatcatgaagtcaggagttcaacaccagcctagccaagatggt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1169085 102 + 81552678 TTAAggccaggtgtggtggcttatgcccgtaatcccagcactttgggaggccaaggcgggtggatcatgaagtc---agttcaacaccagcctagccaagatggt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1495195 105 + 108979918 TTAAggctgggcatggtggctcacgcctgtaatcctagcactttgggagaccgaggcagatggatcatgaagtcaggagttcaacaccagcctagccaagatggt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1467628 105 - 111193037 TTAAggctgggcatggtggctcacgcctataatcctagcactttgggagaccgaggcagatggatcatgaagtcaggagttcaacaccagcctagccaagatggt i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1496318 105 + 3644372 TTAAggctgggcatggtggctcacgcctgtaatcctagcactttgggagaccgaggcagatggatcatgaagtcaggagttcaacaccagcctagccaagatggt i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1450221 90 - 10304083 TTAAggctgggcgtgatggctcacgcctgtaatcctagcactttgg---------------ggatcatgaagtcaggagttcaacaccagcctagccgagatggt i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1530325 105 - 107702431 TTAAggctgggcatggtggctcacacctgtaatcccagcactttgggagaccgaggcagatggatcataaagtcaggaattcaacaccagcctagccaagatagt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1022703 105 - 2200435 TTAAggctgggcgtgatggctcacgcctgtaatcctagcactttgggagaccaaggcaggtggatcatgaggtcaggagttcaacaccagcctagccaagatggt i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 182385 101 + 287728 I e saiBol1.JH378218 1269895 4 - 7082604 I e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e otoGar3.GL873658 962882 0 + 5252280 C e dasNov3.JH576208 1794004 0 + 4416731 C e calJac3.chr14 1440911 2 - 108792865 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=36476.000000 s hg38.chr2_KI270774v1_alt 183156 6 + 223625 gaaacc s panTro5.chr2A 1479929 6 + 111504155 gaaacc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1418792 6 + 114371477 gaaacc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1443111 6 + 1464242 gaaacc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1169187 6 + 81552678 gaaacc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1495300 6 + 108979918 gaaacc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1467733 6 - 111193037 gaaacc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1496423 6 + 3644372 gaaacc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1450311 6 - 10304083 gaagcc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1530430 6 - 107702431 gaaacc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1022808 6 - 2200435 gaaacc i manLeu1.NW_012103754v1 C 0 C 0 s otoGar3.GL873658 962882 6 + 5252280 GAAACC i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 182385 101 + 287728 I e saiBol1.JH378218 1269895 4 - 7082604 I e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e dasNov3.JH576208 1794004 0 + 4416731 C e calJac3.chr14 1440911 2 - 108792865 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=871145.000000 s hg38.chr2_KI270774v1_alt 183162 185 + 223625 ccgtctctactaaaaatacaaagaagaaaaattagccgggcatggtggtaggcgcctgtaatcccagctacccaggaggctgaggcaagagaattgcttgaacccgggagatggaggtttcagtgagccgagattgcaccactgcactccagcctgggcaacagagtgagactccctctc--aaaaa s panTro5.chr2A 1479935 185 + 111504155 ccatctctactaaaaatacaaagaagaaaaattagccgggcatggtggtaggcgcctgtaatcccagctacccaggaggctgaggcaagagaattgcttgaacccgggaggtggaggtttcagtgagccgagattgcaccactgccctccagcctgggcaacagagtgagactccatctc--aaaaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1418798 185 + 114371477 ccatctctactaaaaatacaaagaagaaaaattagccgggcatggtggtaggcgcctgtaatcccagctacccaggaggctgaggcaagagaattgcttgaacccgggaggtggaggtttcagtgagccgagattgcaccactgccctccagcctgggcaacagagtgagactccatctc--aaaac i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1443117 184 + 1464242 ccatctctactaaaaatacaaagaagaaaaattagctgggcatggtggtaggcacctgtaatcccagctacccaggaggctgaggcaagagaattgcttgaacccgggaggtggagg-ttcagtgagccgagattgcaccactgcactccagcctgggcaacagagtgagactccgtcac--aaaaa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1169193 185 + 81552678 ccatctctactaaaaatacaaaaaagaaaaattagccgggcatggtgatgggtgcctgtaatcccagctacccaggaggctgaggcaagagaattgcttgaactcgggaggtggaggtttcaatgagccgagattgcaccactgcactccagcctgggcgacagaatgagactccatctc--caaaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1495306 185 + 108979918 ccacctctactaaaaatacaaaaaagaaaaattagccagtcatggtggtgggtgtctgtaatcccagctacccaggaggctgaggcaagagaattgcttggacccaggaggcggaggtttcagtgagccgagattgcaccactgcactccagcctgggcaacagagtgagactccgtctc--aaaaa i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1467739 185 - 111193037 ccacctctactgaaaatacaaaaaagaaaaattagccagtcatggtggtgggtgtctgtaatcccagctacccaggaggctgaggcaagagaattgcttgaacccaggaggcggaggtttcagtgagccgagattgcaccactgcactccagcctgggcaacagagtgagactccgtctc--aaaaa i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1496429 187 + 3644372 ccacctctattaaaaatacaaaaaagaaaaattagccagtcatggtggtgggtgtctgtaatcccagctacccaggaggctgaggcaagagaattgcttgaacccaggaggcagaggtttcagtgagccgagattgcaccactgcactccaggctgggcaacagagtgagactccgtctcaaaaaaa i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1450317 184 - 10304083 acacctctactaaaaatacaaaaaagaaaaattagccagtcatggtggtgggtgtctgtaatcccagctacccaggaggctg-ggcaagagaactgcttgaacccaggaggtggaggtttcagtgagccgagattgcaacactgcactctagcctgggcaacagagtgagactccgtctg--aaaaa i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1530436 185 - 107702431 ccacctctactaaaaatacaaaaaagaaaaattagccagtcatggtggtgggtgtctgtaatcccagctacccaggaggctgaggcaagagaattgcttgaacgcaggaggcggaggttgcagtgagctgagattgcaacactgcactccagcctgggcaacagagtgagactccatctc--aaaaa i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1022814 185 - 2200435 ccacctctactaaaaatacaaagaagaaaaattagccagtcatggtggtgggtgtctgtaatcccagctacccaggaggctgaggcaagagaattgcttgaacccaggaggtggaggtttcagtgagccgagattgcaccactgcactccagcctgggcaacagagtgagactccgtctc--aaaaa i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 182385 101 + 287728 I e saiBol1.JH378218 1269895 4 - 7082604 I e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e otoGar3.GL873658 962888 0 + 5252280 C e dasNov3.JH576208 1794004 0 + 4416731 C e calJac3.chr14 1440911 2 - 108792865 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=-14044.000000 s hg38.chr2_KI270774v1_alt 183347 6 + 223625 a-a--------aaaa s panTro5.chr2A 1480120 14 + 111504155 a-aaacaaaacaaaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1418983 14 + 114371477 a-aaacaaaacaaaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1443301 9 + 1464242 a-a-----aaaaaaa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1169378 10 + 81552678 a-a----aaaaaaaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1495491 12 + 108979918 a-a--acaaaaaaca i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1467924 12 - 111193037 a-a--acaaaaaaca i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1496616 12 + 3644372 a-a--acaaaaaaca i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1450501 8 - 10304083 a------aaaaaac- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1530621 9 - 107702431 a------aaaacaaa i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1022999 13 - 2200435 aaa--acaaaaaaca i manLeu1.NW_012103754v1 C 0 C 0 s dasNov3.JH576208 1794004 6 + 4416731 -------GAAGAA-- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 182385 101 + 287728 I e saiBol1.JH378218 1269895 4 - 7082604 I e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e otoGar3.GL873658 962888 0 + 5252280 C e calJac3.chr14 1440911 2 - 108792865 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=849932.000000 s hg38.chr2_KI270774v1_alt 183353 143 + 223625 aaaaaaCTGGCAAATGCATTGCAGTGAGTCTCCTCTGAGTGCCTGGATGCTGCAAATTTCAAATAGATAAAAA-GCTGTGAGTCAGTGGCTTTTT-CCATGAGTTATTGTCAGGAGGTTATGCAGTAAACGAATATACATAAATG s panTro5.chr2A 1480134 143 + 111504155 caaaaaCTGACAAATGCATTGCGGTGAGTCTCCTCTGAGTGCCTTGATACTGCAAATTTCAAATAGATAAAAA-GCTGCGAGTCAGTGGCTTTTT-CCATGAGTTATTGTCAGGAGGTTATGCAGTAAACGAATATACATAAATG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1418997 143 + 114371477 caaaaACTGACAAATGCATTGCGGTGAGTCTCCTCTGAGTGCCTTGATACTGCAAATTTCAAATAGATAAAAA-GCTGCGAGTCAGTGGCTTTTT-CCATGAGTTATTGTCAGGAGGTTATGCAGTAAACGAATATACATAAATG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1443310 143 + 1464242 aaaaaaCTGGCAAATGCATTGCAGTGAGTCTCCTCTGAGTGCCTGGATGCTGCATATTTCAAATAGATAAAAA-ACTGCGAATCAGTGGCTTTTT-CCATGAGTTATTGTCAGGAGGTTATGCAGTAAATGAATATACATAAATG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1169388 143 + 81552678 aaaaaGCTGGCAAATGCATTGCAGTGAGTCTCCTCTGAGTGCCTTGATGTTGCGAATTTCAAATAGATAAAAA-GCTGTGAGTCAGTGGCTTTTT-CCATGAGTTATTGTCAGGAGGTTATACAGTAAACGAATATACATAAATG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1495503 143 + 108979918 aaaaaaCTGGCAAATGCATTGCAGTGAGTCTCCTCTGAGTGCCTTGATGCTACAGATTTCAAATAGATAAAAA-GCTATGAATCAGTGGCTTTTT-ACATCAGTTATTGTCAGGAGGTTATACAGTAAACGAATATACATAAATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1467936 143 - 111193037 aaaaaaCTGGCAAATGCATTGCAGTGAGTCTCCTCTGAGTGCCTTGATGCTACAGATTTCAAATAGATAAAAA-GCTATGAATCAGTGGCTTTTT-ACATCAGTTATTGTCAGGAGGTTATACAGTAAACGAATATACATAAATG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1496628 143 + 3644372 aaaaaaCTGGCAAATGCATTGCAGTGAGTCTCCTCTGAGTGCCTTGATGCTACAGATTTCAAATAGATAAAAA-GCTATGAATCAGTGGCTTTTT-ACATCAGTTATTGTCAGGAGGTTATACAGTAAACGAATATACATAAATG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1450509 142 - 10304083 -aaaaaCTGGCGAATGCATTGCAGTGAGTCTCCTCTGAGTGCCTTGATGCTGCAGATTTCAAATAGATAAAAA-GCTATGAATCAGTGGCTTTTT-ACATCAGTTATTGTCAGGAGGTTATGCAGTAAATGAATATACATAAATG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1530630 143 - 107702431 aaaaaaCTGGCAAATGCATTGCAGTGAGTCTCCTCTGAGTGCCTTGATGCTGCAGATTTCAAATAGATAAAAA-GCTATGAATCAGTGGCTTTTT-ACATCAGTTATTGTCAGGAGGTTATGCAGTAAACGAATATACATAAATG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1023012 143 - 2200435 aaaaaaCTGGCAAATGCATTGCAGTGAGTCTCCTCTGAGTGCCTTGATGCTACAGATTTCAAATAGATAAAAA-GCTATGAATCAGTGGCTTTTT-ACATCAGTTATTGTCAGGAGGTTATGCAGTAAACGAATATACATAAATG i manLeu1.NW_012103754v1 C 0 C 0 s otoGar3.GL873658 962888 143 + 5252280 AAAAAGCCAGCAAATGACTTGTAATAAGTCTCAGTTGAGTGCTTTGAAGCTGTGAATTCCAGATAGTTACAAA--CTGTGAGTCTGTGGCTTTTTAATATTCATCATTGTCAAGAGGTTGTGAAATAAATGAGCACGAATAAATG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1794010 144 + 4416731 AAAAAACTGGCAAATGAATTGTAATAAGTCTCATTTGAGTGTTTTTAAGTTGTGAATTCAAAATAGATAAAAAAGCTATCTGTCGGTGGCTTTTT-GCACTTGTTATCGTCAAGAGGCTATGCAATAAATGAATACAAATAAATG i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 182385 101 + 287728 I e saiBol1.JH378218 1269895 4 - 7082604 I e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e calJac3.chr14 1440911 2 - 108792865 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=528333.000000 s hg38.chr2_KI270774v1_alt 183496 136 + 223625 -CTTTGTGCA-TATTATGGAAAATACAGTTCGCAACCAGTACTAATTTACTTAGAGAAATGGAAACATCTGTG----------CACTCACTGCATGTGGAGAC--TGGACACCACAGCCATCTGCGCACTCACTGCGCGTGGAGATGTGT s panTro5.chr2A 1480277 136 + 111504155 -CTTTGTGCA-TATTATGGAAAATACAGTTCGCAACCAGTACTAATTTACTTAGAGAAATGGAAACATCTGTG----------CACTCACTGCATGTGGAGAC--TGGACGCCACAGCCATCTGTGCACTCACTGCGCGTGGAGACGTGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1419140 136 + 114371477 -CTTTGTGCA-TATTATGGAAAATACAGTTCGCAACCAGTACTAATTTACTTAGAGAAATGGAAACATCTGTG----------CACTCACTGCATGTGGAGAC--TGGACGCCACAGCCATCTGTGCACTCACTGCGCGTGGAGACGTGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1443453 138 + 1464242 -CTTTGTGCA-TATTATGGAAAATACAGTTCACAACCAGTACTAATTTACTTAGAGAAATGGAAACATCTGTG----------CACTGACTGCACGTGGAGACTGTGGATGCCACAGCCATCTGCGCACTCACTGCGTGTGGAGACGTGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1169531 148 + 81552678 -CTTTGTGCG-TATTACGGAAAATACAGTTTGCAACCAGTACTAATTTGCTTAGAGAGATGGAAACATCTGTGCCTATCTGCACGCTCAGTACACATGGAGACTGTGGACGCCATGGTCGTCTGCACACTCACTGCGCGTGGAGACGTGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1495646 102 + 108979918 -CTTTGTGCG-TATTACGGAAAATATGGTTCACAACCAATACTAATTTGCTTAGAGAAATGGAAACATCCGTG----------CA---------------------------------CATC--TGCACTCACTGTGCATGGAGAC-TGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1468079 102 - 111193037 -CTTTGTGCG-TATTACGGAAAATATGGTTCACAACCAATACTAATTTGCTTAGAGAAATGGAAACATCCGTG----------CA---------------------------------CATC--TGCACTCACTGTGCAAGGAGAC-TGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1496771 102 + 3644372 -CTTTGTGCG-TATTACGGAAAATATGGTTCACAACCAATACTAATTTGCTTAGAGAAATGGAAACATCCGTG----------CA---------------------------------CATC--TGCACTCACTGTGCATGGAGAC-TGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1450651 104 - 10304083 -CTTTGTGCA-TATTATGGAAAATATGGTTCACAACCAATACTAATTTGCTTAGAGAAATGGAAACATCCGTG----------CA---------------------------------CATCTGTGCACTCACTGTGCATGGAGAC-TGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1530773 104 - 107702431 -CTTTGGGCG-TATTATGGAAAATATGGTTCGCAACCAATACTAATTTGCTTAGAGAAATGGAAACATCCATG----------CA---------------------------------CATCTGCGCGCTCACTGCACATGGAGAC-TGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1023155 104 - 2200435 -CTTTGTGCA-TATTATGGAAAATATGGTTCACAACCAATACTAATTTGCTTAGAGAAATGGAAACATCCGTG----------CA---------------------------------CATCTGTGCACTCACTGTGCATGGAGAC-TGT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1440913 96 - 108792865 -CTTTGTGTG-TGTTACGGAAAACACAGTTCGCAATCAGTACTGATTTTCTTTGAGAAATGGAAACGTGTGCA----------CT---------------------------------------TGTGCACGCTGCGTGTGGAG-CAT-- i calJac3.chr14 I 2 C 0 s saiBol1.JH378218 1269899 97 - 7082604 -CCTTGTGTG-TGTTATGGGAAACTCGGTTCGCAATCAGTACTGATTTGTTTCAAGAAATGGAAACGTGTGCA----------CG---------------------------------------TGTGCACGCCGCATGTGGAGCCGT-- i saiBol1.JH378218 I 4 C 0 s otoGar3.GL873658 963031 93 + 5252280 -CTGTGTCCACCACCATG--------AGGTTGCAGTCAGCATAGGTGTGTGCGGAGAACTGGAAGCATCC-CG----------CA---------------------------------GATGTGTGTGGCTAGTGAGAAGGGGACC---- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1794154 104 + 4416731 TTTCTGTGTC-TATTAGGGAAAGTAAGATTTGCAATCAGTACAAATTTGCTTGGGGAAATGGAGGCATCTGTG----------CA-------------------------------GATGTTTGTGAGCTAGTTG----TGGAGATTTGG i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 182385 101 + 287728 I e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=124526.000000 s hg38.chr2_KI270774v1_alt 183632 16 + 223625 GGACACCA-CGGCCACT s panTro5.chr2A 1480413 16 + 111504155 GGACACCA-CGGCCGCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1419276 16 + 114371477 GGACACCA-CGGCCGCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1443591 16 + 1464242 GGACACCA-CAGCCGCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1169679 16 + 81552678 GGACACCA-CGGCTGCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1495748 16 + 108979918 GGACGCCA-CGGCCACT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1468181 16 - 111193037 GGACGCCA-CGGCCACT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1496873 16 + 3644372 GGACGCCA-CGGCCACT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1450755 16 - 10304083 GGACGCCA-CGGCCACT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1530877 16 - 107702431 GGACGCCA-CGGCCACT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1023259 16 - 2200435 GGACGCCA-CGGCCACT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1441009 16 - 108792865 GGATGCCA-CTGCCACT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1269996 16 - 7082604 GGATGCCA-CTGCCACT i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 182486 16 + 287728 GGACGCCA-CTGCCACT i aotNan1.NW_018513311v1 I 101 C 0 s otoGar3.GL873658 963124 16 + 5252280 AGGTACAC-CTGCTGCT i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1794258 17 + 4416731 GGATGCGGTCTGTTGCT i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1363250 0 + 1864846 C e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=1805556.000000 s hg38.chr2_KI270774v1_alt 183648 229 + 223625 CTTCTTGAAACTCAAGGCGAAGCAGTCGG-----A-GAGCAGAGCCTCGGCCTCCATGCAGGTCACCCT-GGTATCTGGGGACACTGCGG-----CTGAGGCTGGTT----TCCTCCTCTGTCGG---GAGCGCTGCTCTTC-AGACAAGGCCGATTTGTC-CCCCTCCTTC---CTGTCCATCCT-GGGAAGGAGACCTACACAGCGCTGGCCCCTGACTCGGCCTTCTGCTTAGAAGAAAC-TGACCGTGGGT s panTro5.chr2A 1480429 234 + 111504155 CTTCTTGAAACTCAAGGCGAAGCAGTCAGAGAGCA-GAGCAGAGCCTCGGCCTCCGTGCAGGTTGCCCT-GGCATCTGGGGACACTGCGG-----CTGAGGCTGGTT----TCCTCCTCTGTCGG---GAGCGCTGCTCTTC-AGACAAGGCCGATTTGTC-CCCCTCCTTC---CTGTCCATCCT-GGGAAGGAGACCTACACAGCGCTGACCCCTGACTCGGCCTTCCACTTAGAAGAAAC-TGACCGTGGGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1419292 234 + 114371477 CTTCTTGAAACTCAAGGCGAAGCAGTCAGAGAGCA-GAGCAGAGCCTCGGCCTCCGTGCAGGTTGCCCT-GGTATCTGGGGACACTGCGG-----CTGAGGCTGGTT----TCCTCCTCTGTCGG---GAGCGCTGCTCTTC-AGACAAGGCCGATTTGTC-CCCCTCCTTC---CTGTCCATCCT-GGGAAGGAGACCTACACAGCGCTGACCCCTGACTCGGCCTTCCGCTTAGAAGAAAC-TGACCGTGGGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1443607 229 + 1464242 CTTCTTGAAACTCAAGGCGAAGCAGTCGG-----A-GAGCAGAGCCTCGGCCTCCGTGCAGGTTGCCCT-GGTATCTGGGGACACTGCAG-----CTGAGGCTGGTT----TCCTCCTCTGTCAG---GAGCGCTGCTCTTC-AGACAAGGCCGATTTGTC-CCCCTCCTTC---CTGTCCATCCT-GGGAAGGAGACCTACACAGCGCTGACCCCTGACTCGGCCTTCCGCTTAGAAGAAAC-TCACCGTGGGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1169695 224 + 81552678 CTAATTGAAACTCACGGCGAAGCAG---------A-GAGCAGAGCCTCGGCCTCCATGCATGTGGCTCT-GGTATCTGGGGACACTGCGG-----CTGAGGCTGGTT----TCCTCCTCTGTCGG---GAGCGCTGCTCTTC-AGACAGGGCTGATTTGTC-CCCCG-CTTC---CTGTCCATCCT-GGGAAGGAGACCTACACAGCGCTGGCCCCTGACTCGGCCTTCTGCTTAGAAGAAAC-TGACTGTGGGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1495764 233 + 108979918 CTTCTTGAAACTCAAGGTGAAGCAGCCAG-----A-GAGCACAGTCTCGGCCTCTGTGCAGGTTGCCCT-GGTATCTGGGGACACTGCGG-----CTGAGGCTGGTT----TCCTCCTCTGCTGGGGAGAGTGCTGCTCTTC-AGACAGGGCCGATTTGTC-CCCCTCCTTC---CTGTCCATCCTCGGGAAGGAGACCTGCATGGCACTGGCCCCTGACTCAGGCTTCTGCTTAGAATAAAC-TGACCCTGGGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1468197 233 - 111193037 CTTCTTGAAACTCAAGGTGAAGCAGCCAG-----A-GAGCACAGTCTCGGCCTCTGTGCAGGTTGCCCT-GGTATCTGGGGACACTGCGG-----CTGAGGCTGGTT----TCCTCCTCTGCTGGGGAGAGTGCTGCTCTTC-AGACAGGGCCGATTTGTC-CCCCTCCTTC---CTGTCCATCCTCGGGAAGGAGACCTGCATGGCACTGGCCCCTGACTCAGGCTTCTGCTTAGAATAAAC-TGACCCTGGGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1496889 233 + 3644372 CTTCTTGAAACTCAAGGTGAAGCAGCCAG-----A-GAGCACAGTCTCGGCCTCTGTGCAGGTTGCCCT-GGTATCTGGGGACACTGCGG-----CTGAGGCTGGTT----TCCTCCTCTGCTGGGGAGAGTGCTGCTCTTC-AGACAGGGCCGATTTGTC-CCCCTCCTTC---CTGTCCATCCTCGGGAAGGAGACCTGCATGGCACTGGCCCCTGACTCAGGCTTCTGCTTAGAATAAAC-TGACCCTGGGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1450771 233 - 10304083 CTTCTTGAAACTCAAGGTGAAGCAGCCAG-----A-GAGCACAGTCTCGGCCTCTGTGCAGGTTGCCCT-GGTATCTGGGGACACTGCGG-----CTGAGGCTGGTT----TCCTCCTCTGCTGGGGAGAGTGCTGCTCTTC-AGACAGGGCCGATTTGTC-CCCCTCCTTC---CTGTCCATCCTCGGGAAGGACACCTGCATGGCCCTGGCCCCTGACTCAGGCTTCTGCTTAGAATAAAC-TGACCCTGGGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1530893 233 - 107702431 CTTCTTGAAACTCAAGGTGAAGCAGCCAG-----A-GAGCAGAGTCTCGGCCTCTGTGAAGGCTGCCCT-GGTATCTGGGTACACTGCGG-----CTGAGGCTGGTT----TCCTCCTCTGCTGGGGAGAGTGCTGCTCTTC-AGACAGGGCTGATTTGTC-CCCCTTCTTC---CTGTGCATCCTCAGGAAGGAGACCTACATGGCACTGGCCCCTGTCTCAGGCTTCTGCTTAGAATAAAC-TGACCCTGGGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1023275 233 - 2200435 CTTCTTGAAACTCAAGGTGAAGCAGCCAG-----A-GAGCACAGTCTCGGCCTCTGTGCAGGTTGCCCT-GGTATCTGGGGACACTGCGG-----CTGAGGCTGGTT----TCCTCCTCTGCTGGGGAGAGTGCTGCTCTTC-AGACAGGGCCGATTTGTC-CCCCTCCTTC---CTGTCCATCCTCGGGAAGGAGACCTGCATGGCCCTGGCCCCTGACTCAGGCTTCTGCTTAGAATAAAC-TGACCCTGGGT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1441025 236 - 108792865 CTTCCTGAAAGTCAAGGTGAAGCATCCTG-----A-GAGCAGAGCCGGGGCCTCCGTGCAGGCTGCCCT-GGTGTCTGGGGGCACTGCTTGT-TTCTGATGCTGGTT----TCCTCCTCTGTTGCTGGGAGTGCTGCTCTTC-AGCTGGGGCTGACTTGT--CCCCTCCTTC---CTGTCCATCCTTGGGAAGGGGACCCACACAGCACCGGCCCCTGAGTCGGGCTTCTGCTTAGAATAAAC-GGACCGTGGGT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1270012 234 - 7082604 CTTCCTGAAAGTCAAGGCGAAGCATCCTG-----A-GAGCAGAGCCGGGGCCTCCGTGCAGGCTGCCCT-GGTGTCTGGGGGCACTGCCAGT-TTCTGACGCTGGTT----TCCTCCTCTGTTGCT-GGAGCACTGCTCTTC-TGCCAGGACTGACTTGT--CCCCTCCTTC---CTGTCCATCCTCGGG-AGGGGACCGACACAGCACCGGCCCCTGACTCAGGCTTCTTCTTAGAATAAAC-GGACCGTGGGT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1363250 233 + 1864846 CTTCCTGAAAGTCAAGGTGAAGCGTCCTG-----A-GAGCAGAGCTGGGGCCTCCGTGCAGGCTGCCCT-GGTGTCTGGGGGCACTGCCAGT-TTCTGACGCTGGTT-------TCCTCTGTTGCTGGGAGCGCTGCTCTTC-AGCCAGGGCTGACTTGT--CCCCTCCTTC---CTGTCCATCCTCAGGAAGGGGACCGACACAGCACCGGCCCCTGACTCAGGCTTCTGCTTAGAATAAAC-GGACCGTGGGT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 182502 233 + 287728 CTTCCTGAAAGTCAAGGCGAAGCATCCCG-----A-GAGCAGAGCCGGGGCCTCCGTGCAGGCTGCCCT-GGTGTCCGGGGGCACTGCTAGT-TTCTGACGCTGGTT-------TCCGCTGTCGCTGGGAGCGCTGCTCTTC-AGCCAGGGCTGACTTGT--CCCCTCCTTC---CTGTCCATCCTCAGGAAGGGGACCCACACAGCACCGGCCCCTGACTCGGGCTTCTGGTTAGAATAAAC-GGACCGTGGGT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 963140 214 + 5252280 CTTCTTGAAATTCAAGGTGAAGTGACAGA-----A-AAGGAAA--TGGGAGCTTTGTGCAGGTGA------------GGGGAGCCTGGTGCTGGTCTGAGGCTATCC----CACTCCACCAACAG-----GCATCGGTACCC-AGGCAGGCTGGGTTTGC--AGGCTCCTCA---GTGT-CACCTT--GGGCGGGGACCTGCAGGGCACCAG-CCCTGACCTAGACTTCCGAGTACAGTACTC-TGACC-TGTGC i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1794275 241 + 4416731 TTTCTTGAA----AAAATAATCTGGCCAG-----GTAAGCAAAGCCTACGTCTTTGTGCAAATTGATAGAGGAATTCGGGGATCCTGCTGGC---CCAACACTATTTGTCCTTCTTCTTTTTTGTAAGGAACATCAGTACCCAAAACAGTGTAGGTGTGTTGCACATTCTTCAGGCTCTTAATCATAGGG--TGAGATCTAGAATATCCCAGTCTCTGATTTCTGCTTCTGCTTATGAAAGACTTGATTGTAGGT i dasNov3.JH576208 C 0 I 44 e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=1945446.000000 s hg38.chr2_KI270774v1_alt 183877 246 + 223625 GGAGCgttgtgggccaa--actgtgcccccaaaaag-ctatgctcaagttctagccccgtgtacctctgcatgtggcctgatgaagaagcaaggcctttgcaggtgccgtcgagttaaagtgaggctgtcgggtgcatcctgctccaatgtgcagtgccctcataggaagcagagacaagacac-----agacgggaccctgtgaagacccaggatggaaataaagcttctgccag----gcat---------------------------------------------gggcccccc-------------------------------------------aggac s panTro5.chr2A 1480663 246 + 111504155 GGAGCAttgtgggccaa--actgtgcccccgaaaag-ctatgctcaagttctagccctgtgtacctctgcatgaggcctgatgaagaagcaaggcctttgcaggtgccgtcgagttaaagtgaggctgtcgggtgcatcctgctccaatgtgcagtgccctcgtaggaagcggagacaagacac-----agacaggaccctgtgaagacccaggatggaaataaagcatctgccag----gcat---------------------------------------------gggcccccc-------------------------------------------aggac i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1419526 242 + 114371477 GGAGCAttgtgggccaa--actgtgcccccgaaaag-ctatgctcaagttctagccctgtgtacctctgcatgaggcctgatgaag----aaggcctttgcaggtgccgtcgagttaaagtgaggctgtcgggtgcatcctgctccaatgtgcagtgccctcgtaggaagcggagacaagacac-----agacaggaccctgtgaagacccaggatggaaataaagcatctgccag----gcat---------------------------------------------gggcccccc-------------------------------------------aggac i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1443836 249 + 1464242 GGAGCAttgtgggccaa--actgtg-ccccgaaaag-ctatgctcaagttctagccccatgtacctctgcatgcagcctgatgaagaagcaaggcctttgcaggtgccgtcgagttaaagtgaggctgtcgggtgcatcctgctccaatgcacaatgtcctcgtaggaagcggagacaagacacaca-gagacgggaccctgtgaagacccaggatggaaataaagcatctgccag----gcat---------------------------------------------gggcccccc-------------------------------------------aggac i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1169919 243 + 81552678 GGAGGgttgtgggccaa--actgtgcccccaaaaag-ctatgctcaagttctagccccgtgtacctctgcatgtggcgtgatgaagacgcaaggcctttgcaggtgccatcgagttaaaatgaggctgtcgggtgcatcctgctccaatgcgcagtgtcctcgtaggaagaggagacaagacacaga-gagacgggaccgtgtggagacccaggatggaaacaaagcatctgccag----gcat---------------------------------------------gggaccc-------------------------------------------------- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1495997 250 + 108979918 GGAGCAttgtgggccaa--actgtgccccccaaaag-ctatgctcaagttctagccccgtgtacctctgcatgtggcctgaagaagaggcaaggcctttgcaggtgccatcaagttaaaatgaggctgtcgggtacgtcccgatccaatgtgcagtgtcctcgtaggaagaggagacaagacacaga-gagatgggaacatgtgaagacccaggatggaaacaaagcatctgccag----gcat---------------------------------------------gggcccccc-------------------------------------------aggac i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1468430 248 - 111193037 GGAGCAttgtgggccaa--actgtgccccccaaaag-ctatgctcaagttctagccccgtgtacctctgcatgtggcctgaagaagaggcaaggcctttgcaggtgccatcaagttaaaatgaggctgtcgggtacgtcccgatccaatgtgcagtgtcctcgtaggaagaggagacaag--acaga-gagatgggaacatgtgaagacccaggatggaaacaaagcatctgccag----gcat---------------------------------------------gggcccccc-------------------------------------------aggac i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1497122 250 + 3644372 GGAGCAttgtgggccaa--actgtgccccccaaaag-ctatgctcaagttctagccctgtgtacctctgcatgtggcctgaagaagaggcaaggcctttgcaggtgccatcaagttaaaatgaggctgtcgggtacgtcccgatccaatgtgcagtgtcctcgtaggaagaggagacaagacacaga-gagatgggaacatgtgaagacccaggatggaaacaaagcatctgccag----gcat---------------------------------------------gggcccccc-------------------------------------------aggac i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1451004 250 - 10304083 GGAGCgttgtgggccaa--actgtgccccccaaaag-ctatgctcaagttctagccccgtgtacctctgcatgtggcctgaagaagaggcaaggcctttgcaggtgccatcaagttaaaatgaggctgtcggatacgtcccgatccaatgtgcagtgtcctcgtaggaagaggagaaaagacacaga-gagatgggaacgtgtgaagacccaggatggaaacaaagcatctgccag----gcat---------------------------------------------gggcccccc-------------------------------------------aggac i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1531126 250 - 107702431 GGAGCAttgtgggccaa--actgtgcccccgaaaag-ctatgctcaagttctagccccgtgtacctctgcgtgtggcctgaagaagaggcaaggcctttgcaggtgccatcaagttaaaatgaggctgtcgggtacgtcccgatccaatgtgcagtgtcctcataggaagaggagacgagacacaga-gagatgggaatgtatgaagacccaggatggaaacaaagcatctgccag----gcat---------------------------------------------gggttcccc-------------------------------------------aggac i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1023508 250 - 2200435 GGAGCgttgtgggccaa--actgtgccccccaaaag-ctatgctcaagttctagccccgtgtacctctgcatgtggcctgaagaagaggcaaggcctttgcaggtgccatcaagttaaaatgaggctgtcgggtacgtcccgatccaatgtgcagtgtcctcgtaggaagaggagacaagacacaga-gagatgggaacgtgtgaagacccaggatggaaacaaagcatctgccag----gcat---------------------------------------------gggcccccc-------------------------------------------aggac i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1441261 246 - 108792865 AGAACATCGtgggccaa--actgtgccccccaaaaatctatgctcaagttctagcccc-tgtacctctgcatgtggcctgat-aagaagccaggccattgtgggcaccactgagttaaaatgaggctctc-ggtgtgtcccaatccaatgcgtggtgtcctcttgggaagaggagaggagacac--a-gagacgggaccatgccaagatccaggatggaaacaaagcatctgccag----gcat---------------------------------------------gggccccat-------------------------------------------gggac i calJac3.chr14 C 0 I 8 s saiBol1.JH378218 1270246 284 - 7082604 AGAACAttgtgggccaa--actgtgcccccaaaaaatctatgctcaagttctagcccc-tgtacctctgcatgtggcctgatgaagaagcaaggtctttgtgggcaccactgagttaaaatga---------gtgtgtcccgatccaatgtgaggtgtccttgtgggaagaggggaggaggcacaga-gagacgggaccatgtgaagactcaggatggaaacAAAGCATCCGCCAG----GCAT---------------------------------------------CGGCCCCCTGGGACGCTGGAAACAAAGCATCCCAGGCATGGGCGCCCTCCCCGGGAC i saiBol1.JH378218 C 0 I 8 s cebCap1.NW_016107827v1 1363483 248 + 1864846 AGAACATCAtgggccaa--actgtgccccccaaaaatctatgctcaagttctagcccc-tgtacctctgtatgtggcctgatgaagaaggaaggcctttgtgggcaccaccgagttaaaatgaggctgtcgggtgtgtcccaatccaacgtgcggtgtcctcgtgggaagaggagaggagacac--a-gagatgggaccatgtgaagacccaggatggaaacaaagcatccgccag----gcat---------------------------------------------gggcccccc-------------------------------------------gggac i cebCap1.NW_016107827v1 C 0 I 210 s aotNan1.NW_018513311v1 182735 225 + 287728 AGAACAtcgtgggccga--actgtgccccccaaaagtctatgctcaagttctggcccc-tgtacctctgcatgtggcctgatgaagaagca---------------------agttaaaatgaggctgtcgggtgtgtcccgatccagtgtgcggtgtcctcgtgggaagaggagaggagacac--a-gagacggtaccgtgtaaagacccaggatggaaacaaagcatctgcca-----gcat---------------------------------------------gggcccct--------------------------------------------gggac i aotNan1.NW_018513311v1 C 0 I 8 s otoGar3.GL873658 963354 292 + 5252280 AGAGCACTGCAggatgagtgctgtgctccc-aaaag-atgagctcatgtcctaacccccagtacctcagaaagtgaacttac-tggaaacagagtccttgcagatgctgtcaagttaaaacgaagtcactaagg--gacctgatttggtgcctggtggcc---agcaaggaggtgaaaagacacaaaggggagatgaccttgtgagg---ctggactggaatgaagggtctgcaagctgagcatcatggaggaccaccgaggagacccaagacctccaagaaaagctgaggaccacct-------------------------------------------aggac i otoGar3.GL873658 C 0 I 9 e dasNov3.JH576208 1794516 44 + 4416731 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=979750.000000 s hg38.chr2_KI270774v1_alt 184123 149 + 223625 ccaccaggagccagggcatgcaggaa-----ggacgccccccgactc--ccgagagcctgctgaaggagcaccacccggccgacaccctgatttcagacctgtgacctctagaactcttgga-ggatgcatttctgttgcttggagccatccacttt s panTro5.chr2A 1480909 149 + 111504155 ccaccaggagccagggcatgcaggaa-----ggacgcccccccaccc--ccgagagcctgctgaaggagcaccacccggccaacacgctgatttcagacctgtgacctctagaactctggga-ggatgcatttctgttgcttggagccatccacttt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1419768 149 + 114371477 ccaccaggagccagggcatgcaggaa-----ggacgcccccccaccc--ccgagagcctgctgaaggagcaccacccggccaacaccctgatttcagacctgtgacctctagaactcttgga-ggatgcatttctgttgcttggagccatccacttt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1444085 148 + 1464242 ccaccaggagccagggcatgcaggaa-----ggacgcccccc-accc--ccgagagcctgctgaaggagcaccacccggccgacaccctgatttcagacctgtgacctctagaactcttgga-ggatgcatttctgttgcttggagccatccacttt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1170162 148 + 81552678 ---ccaggagccagagcatgcaggaa-----ggacgcccccgcactccgccgagagcctgctgaaggagcaccgcccggccgacaccctgatttcagacctgtgacctccagaactctcgga-gggtgcatttctgttgtttggcgccatccacttt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1496247 145 + 108979918 ccaccaggagccagagcatgcaggaa-----ggacctcctcc----c--ccgagagccttctgaaggagcaccacccggccgacaccctgatttcagacctttgacctccagaactgttgga-ggatgcatttctgttgcttggagccatccggttt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1468678 145 - 111193037 ccaccaggagccagagcatgcaggaa-----ggacctcctcc----c--ccgagagccttctgaaggagcaccgcccggccaacaccctgatttcagacctgtgacctccagaactgttgga-ggatgcatttctgttgcttggagccatccagttt i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1497372 145 + 3644372 ccaccaggagccagagcatgcaggaa-----ggacctcctcc----c--ctgagagccttctgaaggagcaccgcccggccgacaccctgatttcagacctgtgacctccagaactgttgga-ggatacatttctgttgcttggagccatccagttt i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1451254 145 - 10304083 ccaccaggagccagagcatgcaggaa-----ggaccccctcc----c--ccgagagccttctgaaggagcaccgcccagccgacaccctgatttcagacctgtgacctccagaactattgga-ggatgcatttctattgcttggagccgtccagttt i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1531376 144 - 107702431 ccaccaggagccagagcatgcaggaa-----gga-cccctcc----c--ccgagagccttctgaaggagcgccacccggccgacgccctgatttcagacctgtgacctccagaactgttgga-ggatacatttgtgttgcttggagccgtccagttt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1023758 145 - 2200435 cccccaggagccagagcatgcaggaa-----tgaccccctcc----c--ccgagagccttccgaaggagcaccgcccggccgacaccctgatttcagacctgtgacctccagaactattgga-ggatgcatttctgttgcttggagccgtccagttt i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1441515 145 - 108792865 ccaccaggagccggagcaggcaggag-----ggaccctcacc---cc--aagagagccttccaagggtgcatcgccaggccaacaccctgacttcagacctgtggcctccagaactgttgga-ggatgcattgctggcacatggagcca-tcagttt i calJac3.chr14 I 8 C 0 s saiBol1.JH378218 1270538 120 - 7082604 CCACCAGGAGCTGGAGCAGGCAGGAG-----GGACCTTCCCC---CC--GAGAGAGCCTTCCAAGGGAGCACCGCCTGACCGACACCCTGAC-------------------------TTGGC-GGATGCATTGCTGGCGCGTGGAGCCA-TCAGTTT i saiBol1.JH378218 I 8 C 0 s aotNan1.NW_018513311v1 182968 146 + 287728 ccactgggagccggagcaggcaggag-----ggaccctcccc---cc--gagagagccttccaagggagcaccgcccggccgacaccctgacttcagacctgtggcctccagaactgttaga-ggacgcattgctggcgcacggagccacccagttt i aotNan1.NW_018513311v1 I 8 C 0 s otoGar3.GL873658 963655 145 + 5252280 ccaccaaggatcacaacaaccaccagaaactggaccctcccc----c--t---gaggctttgtggggagc-ctgccttgccaa--ccccagtctcagacttgtgtcctccagaaggatagaatggatgcatttctgtggttttaagccacctggtcc i otoGar3.GL873658 I 9 C 0 e cebCap1.NW_016107827v1 1363731 210 + 1864846 I e dasNov3.JH576208 1794516 44 + 4416731 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=333056.000000 s hg38.chr2_KI270774v1_alt 184272 36 + 223625 gtgatgatttttcccagcagccacagggaactcata-- s panTro5.chr2A 1481058 36 + 111504155 gtgatgatttttcccagcagccacagggaactcata-- i panTro5.chr2A C 0 I 3 s panPan2.chr2A 1419917 36 + 114371477 gtgatgatttttcccagcagccacagggaactcata-- i panPan2.chr2A C 0 I 3 s gorGor5.CYUI01015607v1 1444233 36 + 1464242 gtgatgatttttcccagcagccacagggaactcata-- i gorGor5.CYUI01015607v1 C 0 I 3 s nomLeu3.chr19 1170310 36 + 81552678 gtgatgatttttcccagcagccacagggaactcata-- i nomLeu3.chr19 C 0 I 1478 s rheMac8.chr13 1496392 36 + 108979918 gtgatgatttttcccagcagccgcagggaactcata-- i rheMac8.chr13 C 0 I 3 s macFas5.chr13 1468823 36 - 111193037 gtgatgatttttcccaacagccgcagggaactcata-- i macFas5.chr13 C 0 I 3 s macNem1.NW_012011978v1 1497517 36 + 3644372 gtgatgatttttcccagcagccgcagggaactcata-- i macNem1.NW_012011978v1 C 0 I 3 s cerAty1.NW_012000820v1 1451399 36 - 10304083 gtgatgatttttcccagcagccgcagggaactcata-- i cerAty1.NW_012000820v1 C 0 I 3 s chlSab2.chr14 1531520 36 - 107702431 gtgatgatttttcccagcagccacagggaactcata-- i chlSab2.chr14 C 0 I 3 s manLeu1.NW_012103754v1 1023903 36 - 2200435 gtgatgatttttccgagcagccacagggaactcata-- i manLeu1.NW_012103754v1 C 0 I 3 s calJac3.chr14 1441660 36 - 108792865 ctgatggtttttcccagcagccacagggaactcata-- i calJac3.chr14 C 0 I 3 s saiBol1.JH378218 1270658 36 - 7082604 GTGATGGTTTCTCTCAGCAGCCACAGGGAACGCATA-- i saiBol1.JH378218 C 0 I 3 s cebCap1.NW_016107827v1 1363941 36 + 1864846 GTGATGGTTTTTCCCAGCAGCCACAGGGAATTCATA-- i cebCap1.NW_016107827v1 I 210 I 3 s aotNan1.NW_018513311v1 183114 35 + 287728 gtgatggtttttcccagcagcca-agggaactcaca-- i aotNan1.NW_018513311v1 C 0 I 3 s otoGar3.GL873658 963800 38 + 5252280 atggtggtttgccacggcagccACACGACAGCCTTGCA i otoGar3.GL873658 C 0 C 0 e dasNov3.JH576208 1794516 44 + 4416731 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=197732.000000 s hg38.chr2_KI270774v1_alt 184308 31 + 223625 -AGGATGAGTCTGAACTGCAGGGATGGGGTG------A s panTro5.chr2A 1481097 31 + 111504155 -AGGATGAGTCTGAACTGCAGGGATGGGGTG------A i panTro5.chr2A I 3 C 0 s panPan2.chr2A 1419956 31 + 114371477 -AGGATGAGTCTGAACTGCAGGGATGGGGTG------A i panPan2.chr2A I 3 C 0 s gorGor5.CYUI01015607v1 1444272 30 + 1464242 -AGGATGAGTCTGAACTGCAGGGGT-GGGTG------A i gorGor5.CYUI01015607v1 I 3 C 0 s nomLeu3.chr19 1171824 27 + 81552678 -AGGATGA----GAACTGCAGGGATGGGGTG------A i nomLeu3.chr19 I 1478 C 0 s rheMac8.chr13 1496431 31 + 108979918 -AGGATAAGTCTGAGCTGCAGGGAGCGGGTG------A i rheMac8.chr13 I 3 C 0 s macFas5.chr13 1468862 31 - 111193037 -AGGATAAGTCTGAGCTGCAGGGAGCGGGTG------A i macFas5.chr13 I 3 C 0 s macNem1.NW_012011978v1 1497556 31 + 3644372 -GGGATAAGTCTGAGCTGCAGGGAGCGGGTG------A i macNem1.NW_012011978v1 I 3 C 0 s cerAty1.NW_012000820v1 1451438 31 - 10304083 -AGGATGAGTCTGAGCTGCAGGGAGCGGGTG------A i cerAty1.NW_012000820v1 I 3 C 0 s chlSab2.chr14 1531559 31 - 107702431 -AGGATGAGTCTGAGCTGCAGGGAGTGGGTG------A i chlSab2.chr14 I 3 C 0 s manLeu1.NW_012103754v1 1023942 31 - 2200435 -AGGATGAGTCTGAGCTGCAGGGAGGGGGTG------A i manLeu1.NW_012103754v1 I 3 C 0 s calJac3.chr14 1441699 37 - 108792865 -GGGATGAGTCTGAATTGAAGGGACAGAGTTAGGCACA i calJac3.chr14 I 3 C 0 s saiBol1.JH378218 1270697 37 - 7082604 -GGGATGAGTCTGAACTCAAGGGATGGGGCGAGGCACA i saiBol1.JH378218 I 3 C 0 s cebCap1.NW_016107827v1 1363980 37 + 1864846 -GGGATGAGTCTGAACTCAAGGGACGAGGCGAGGCACA i cebCap1.NW_016107827v1 I 3 C 0 s aotNan1.NW_018513311v1 183152 37 + 287728 -GCGATGAGTCTGAACTCCAGGGACGGGGTGAGGCACA i aotNan1.NW_018513311v1 I 3 C 0 s otoGar3.GL873658 963838 29 + 5252280 TGGGATAA-TCTCAGCTCCTGGCAGGGGA--------A i otoGar3.GL873658 C 0 C 0 e dasNov3.JH576208 1794516 44 + 4416731 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=363754.000000 s hg38.chr2_KI270774v1_alt 184339 50 + 223625 GGAGAGGGGGCAGAAGCTGCTCCAAGGGAA---CTCCCCGAGAGGGATG---CAG-G s panTro5.chr2A 1481128 49 + 111504155 GGAGA-GGGGCAGAAGCTGCTCCAAGGGAA---CTCCCCGAGAGGGATG---CAG-G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1419987 49 + 114371477 GGAGA-GGGGCAGAAGCTGCTCCAAGGGAA---CTCCCCGAGAGGGATG---CAG-G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1444302 50 + 1464242 GGAGAGGGGGCAGAAGCTGCTCCAAGGGAA---CTCCCCGAGAGGGATG---CAG-G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1171851 50 + 81552678 GGAGAGGGGGCGGAAGCTGCTCCAAGGGAA---CTCCCTGAGAGGGATG---CAG-G i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1496462 49 + 108979918 GGAGA-GGGGCGGAAGCTGCTCCAAGGGAA---CTCCCCGAGAGGGAGG---TAG-G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1468893 49 - 111193037 GGAGA-GGGGCGGAAGCTGCTCCAAGGGAA---CTCCCCGAGAGGGAGG---TAG-G i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1497587 49 + 3644372 GGAGA-GGGGCGGAAGCTGCTCCAAGGGAA---CTTCCCGAGAGGGAGG---TAG-G i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1451469 50 - 10304083 GGAGAGGGGGCGGAAGCTGCTCCGAGGGAA---CTCCCCGAGAGGGAGG---TAG-G i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1531590 49 - 107702431 GGAGA-GGGGCGGAAGCTGCTCCAAGGGAA---CTCCCCTAGAGGGAGG---GAG-G i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1023973 49 - 2200435 GGAGA-GGGGCGGAAGCTGCTCCAAGGGAA---CTCCCCGAGAGGGAGG---TAG-G i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1441736 46 - 108792865 GGAGA-GGGGTGTAAGCTGCTCCGAGGGAA---CTCCC--GGGTGGATG---CAG-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1270734 47 - 7082604 GGAGA-GGGGCAGAAGCTGCTCTGAAGAAA---GTCCCT-GGGGGGATG---CAG-- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1364017 49 + 1864846 GGAGG-GGGGCGGAAGCTGCTCCGAGGGAA---CTCCCTGGGGGGGATG---CAGG- i cebCap1.NW_016107827v1 C 0 I 139 s aotNan1.NW_018513311v1 183189 42 + 287728 GGAGA-GGGGCGGAAGCTGCTCCGAGGGAA---C------AGGGGAATG---CGG-- i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 963867 50 + 5252280 GTGGA-GGAGTGGGAGA-ACTCCAAGGGAC---CCCCAGGAAAGGGGCATGTCAG-- i otoGar3.GL873658 C 0 I 2 s dasNov3.JH576208 1794560 52 + 4416731 GGAGA-GGAGACAAAGCTGTTCAGCGGGAAGCTTTGCCTAGAAGGCAAA---TGA-G i dasNov3.JH576208 I 44 C 0 e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=552920.000000 s hg38.chr2_KI270774v1_alt 184389 128 + 223625 GATGTG-------TTGGC-------------------------------------------AGCTGCCATTC----------CCATTCTGAGGACCC-CATTGCACATCCCAGGGGAT---GGAGAGAAAA-TGGGCTTGT-AGCGT------TCATGGGTGATGACTTTGATTTTTCACACGATCATGATGGAAACACT------------------ s panTro5.chr2A 1481177 129 + 111504155 GATGTGT------TTGGC-------------------------------------------GGCTGCTGTTC----------CCATTCTGAGGACCC-CATCGCACATCCCAGGGGAT---GGAGAGAAAA-TGGGCTTGC-AGCGT------TCATGGATGATGACTTTGATTTTTCATGCGATCATGATGGAAACACT------------------ i panTro5.chr2A C 0 I 1 s panPan2.chr2A 1420036 128 + 114371477 GATGTG-------TTGGC-------------------------------------------GGCTGCTGTTC----------CCATTCTGAGGACCC-CATCGCACATCCCAGGGGAT---GGAGAGAAAA-TGGGCTTGC-AGCGT------TCATGGGTGATGACTTTGATTTTTCATGCGATCATGATGGAAACACT------------------ i panPan2.chr2A C 0 I 1 s gorGor5.CYUI01015607v1 1444352 128 + 1464242 GATGTG-------TTGGC-------------------------------------------GGCTGCCGTTC----------CCATTCTAAGGACCC-CATCGCACATCCCAGGGGAT---GGAGAGAAAA-TGGGCTTGC-AGCGT------TCATGGGTGATGACTTTGATTTTTCACGCGATCGTGATGGAAACACT------------------ i gorGor5.CYUI01015607v1 C 0 I 1 s nomLeu3.chr19 1171901 131 + 81552678 GATGTG-------TTGGC-------------------------------------------GGCTGCCGTTC----------CCATTCTGAGGACCC-CATCGCACATCCCAGGGGATGAAGAAGAGAAAA-TGGGCCTGC-AGCAT------TCATGGGTGATGACTTTGATTTTTTATGCGATCATGATGGAAACACT------------------ i nomLeu3.chr19 C 0 I 1 s rheMac8.chr13 1496511 130 + 108979918 GATGTG-------TTGGC-------------------------------------------GGCTGCCGTTC----------CCACTCTGAGGGCCC-CATGGCACA-CCCCGGGGGTGAAGAAGAGAAAA-TGGGCTTGC-AGCAT------CCATGGGTGAGGACCTCGATTTCTCACGCGATCATGTTAGAAACACT------------------ i rheMac8.chr13 C 0 I 1 s macFas5.chr13 1468942 130 - 111193037 GATGTG-------TTGGC-------------------------------------------GGCTGCCGTTC----------CCACTCTGAGGGCCC-CATGGCACA-CCCCGGGGGTGAAGAAGAGAAAA-TGGGCTTGC-AGCAT------CCATGGGTGTGGACCTCGATTTCTCACGCGATCATGATAGAAACACT------------------ i macFas5.chr13 C 0 I 1 s macNem1.NW_012011978v1 1497636 130 + 3644372 GATGTG-------TTGGC-------------------------------------------GGCTGCCGTTC----------CCACTCTGAGGGCCC-CATGGCACA-CCCCGGGGGTGAAGAAGAGAAAA-TGGGCTTGC-AGCAT------CCAAGGGTGAGGACCTCGATTTCTCACGCGATCATGATAGAAACACT------------------ i macNem1.NW_012011978v1 C 0 I 1 s cerAty1.NW_012000820v1 1451519 130 - 10304083 GATGTG-------TTGGC-------------------------------------------AGCTGCTGTTC----------CCACTCTGAGGGCCC-CATGGCACA-CCCTGGGGGTGAAGAAGAGAAAA-CGGGCTTGC-AGCAT------CCATGGGTGAGGACCTCGATTTCTCACGCGATCATGATAGAAACACT------------------ i cerAty1.NW_012000820v1 C 0 I 1 s chlSab2.chr14 1531639 131 - 107702431 GATGTG-------TTGGC-------------------------------------------GGCTGCCATTC----------CCACTCTGAGGGCCC-CATGGCACATCCCAAGGGGTGAAGAAGAGAAAA-TGGGCCTGC-AGCAT------CCATGGGTGAGGATCTCGATTTCTCATGCAATCATGATAGAAACACT------------------ i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012103754v1 1024022 130 - 2200435 GATGTG-------TTGGC-------------------------------------------AGCTGCCGTTC----------CCACTCTGAGGGCCC-CATGGCACA-CCCTGGGGGTGAAGAAGAGAAAA-CGGGCTTGC-AGCAT------CCATGGGTGATGGCCTCGATTTCTCACGCAATCATGATAGAAACACT------------------ i manLeu1.NW_012103754v1 C 0 I 1 s calJac3.chr14 1441782 138 - 108792865 GATGTC-------TTGGCCAGTGGGAACAGCAGCCCCGGGCAGGGCTGCTC-ACAAC-AGCGGCTGCCATTT----------CCACTCTGTGGGCCT-CATCACAGGTCCCCG----------------------------------------CCATGGGTGGTGACTTAGATTT-TCATGCAATCAT-ATGGAAGCACT------------------ i calJac3.chr14 C 0 I 1 s saiBol1.JH378218 1270781 119 - 7082604 GATGTG-------TTGGCCAATGGGAACAGCAG-CCCGGGCAGGGCTGCTC-------------------------------CCACTCTGTGGGTCT-CATCACAGGTCCCGG----------------------------------------CCATGGATGGTGACTTAGATTT-TCATGCAATCATGACAGAAGCACA------------------ i saiBol1.JH378218 C 0 I 1 s aotNan1.NW_018513311v1 183231 137 + 287728 GATGTG-------TTGGCCGATGGGAGCAGCAGCCCCGGGCAGGGCTGCTC-ACAAC-AGTGGCTGCCATTC----------CCACTCTGTGGGCCT-CATCACAGGTCCCGG----------------------------------------CCATGGGTGGTGAC--AGATTT-TCATGCAATCATGATGGAAGCACT------------------ i aotNan1.NW_018513311v1 C 0 I 1 s otoGar3.GL873658 963919 152 + 5252280 AACGTGGAC---AGTGGC-----------------CATGGCAGGGCTGCTTCACAGCAAGGGCCTGCCACTG----------CTGCTTGGCACACCT-C-TCCCACA-TCCTGGGTATGA-GGACAGGAAG-CAGAGCCAC-AGCCTTTGATCTTCCGAGTGATGGCTTTGCAGCCTCA------------GGGAACACC------------------ i otoGar3.GL873658 I 2 C 0 s dasNov3.JH576208 1794612 172 + 4416731 AACGTGAGTCCACTGGGC-----------------------AGAGCTG-------------GTTTACCATGCTCAGGGATCTTCACTTTGTTGATTTACATTTCACATTCCTTTAGCTAAGAAAGAGAAAATTGGAGTTGCAAGCAC------TAATGGGCAATGGC----ATTTTTCATGCTCTCATGACAAAAGCAAGCCTAATTGAATATTCTCC i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1364066 139 + 1864846 I e colAng1.NW_012118821v1 1450834 12 - 13651311 I a score=199363.000000 s hg38.chr2_KI270774v1_alt 184517 19 + 223625 CCCTACCCCAGAGGCGGCT s panTro5.chr2A 1481307 19 + 111504155 CCCTACCCCAGGGGCGGCT i panTro5.chr2A I 1 C 0 s panPan2.chr2A 1420165 19 + 114371477 CCCTACCCCAGGGGCGGCT i panPan2.chr2A I 1 C 0 s gorGor5.CYUI01015607v1 1444481 19 + 1464242 CCCTACCCCAGGGGTGGCT i gorGor5.CYUI01015607v1 I 1 C 0 s nomLeu3.chr19 1172033 19 + 81552678 CCCTACCCCAGGGGCGGCT i nomLeu3.chr19 I 1 C 0 s rheMac8.chr13 1496642 19 + 108979918 CCCTACCCCAGGGGTGGCT i rheMac8.chr13 I 1 I 1191 s macFas5.chr13 1469073 19 - 111193037 CCCTACCCCAGGGGTGGCT i macFas5.chr13 I 1 I 584 s macNem1.NW_012011978v1 1497767 19 + 3644372 CCCTACCCCAGGGGTGGCT i macNem1.NW_012011978v1 I 1 C 0 s cerAty1.NW_012000820v1 1451650 18 - 10304083 CCCTACCCCA-GGGCGGCT i cerAty1.NW_012000820v1 I 1 C 0 s chlSab2.chr14 1531771 19 - 107702431 CCCTACCCCAGGGGCAGCT i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012103754v1 1024153 18 - 2200435 CCCTACCCCA-GGGCGGCT i manLeu1.NW_012103754v1 I 1 C 0 s colAng1.NW_012118821v1 1450846 19 - 13651311 CCCTACCCCAGGGGCAGCT i colAng1.NW_012118821v1 I 12 C 0 s calJac3.chr14 1441921 19 - 108792865 CCCTACCCCAGGGGCAGCT i calJac3.chr14 I 1 C 0 s saiBol1.JH378218 1270901 18 - 7082604 CCCTACCCCA-GGGCAGCT i saiBol1.JH378218 I 1 C 0 s cebCap1.NW_016107827v1 1364205 19 + 1864846 CCCTACCCCAGGGGCAGCT i cebCap1.NW_016107827v1 I 139 C 0 s aotNan1.NW_018513311v1 183369 19 + 287728 CCCGACCCCAGGGGCGGCT i aotNan1.NW_018513311v1 I 1 C 0 s otoGar3.GL873658 964071 17 + 5252280 GCCTGGCC--AGGGAGACT i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1794784 19 + 4416731 CTCTCCCCCAGGTGAGGCT i dasNov3.JH576208 C 0 C 0 a score=138013.000000 s hg38.chr2_KI270774v1_alt 184536 12 + 223625 GCAGATGCCTTC s panTro5.chr2A 1481326 12 + 111504155 GCAGATGCCTTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1420184 12 + 114371477 GCAGATGCCTTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1444500 12 + 1464242 GCAGACGCCTTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1172052 12 + 81552678 GCAGATGCCTTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1497852 12 + 108979918 GCAGATGCCTTC i rheMac8.chr13 I 1191 C 0 s macFas5.chr13 1469676 12 - 111193037 GCAGATGCCTTC i macFas5.chr13 I 584 C 0 s macNem1.NW_012011978v1 1497786 12 + 3644372 GCAGATGCCTTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1451668 12 - 10304083 GCAGATGCCTTC i cerAty1.NW_012000820v1 C 0 I 200 s chlSab2.chr14 1531790 12 - 107702431 GCAGATGCCTTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1024171 12 - 2200435 GCAGATGCCTTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1450865 12 - 13651311 GCAGATGCCTTC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1441940 12 - 108792865 GCAGACACCTTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1270919 12 - 7082604 GCAGACACCTTC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1364224 12 + 1864846 GCAGACACCTTC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 183388 12 + 287728 GCAGACACCTTC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 964088 12 + 5252280 GCACAGGCCCCC i otoGar3.GL873658 C 0 I 3 s dasNov3.JH576208 1794803 12 + 4416731 GCATATGTAGTC i dasNov3.JH576208 C 0 C 0 a score=115610.000000 s hg38.chr2_KI270774v1_alt 184548 14 + 223625 ---------ACACAGCTCTGGTG s panTro5.chr2A 1481338 14 + 111504155 ---------ACACAGCTCTGGTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1420196 14 + 114371477 ---------ACACAGCTCTGGTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1444512 14 + 1464242 ---------ACACAGCTCTGGTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1172064 14 + 81552678 ---------ACACAGCTCCGGTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1497864 14 + 108979918 ---------GCACAGCTCCGGCG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1469688 14 - 111193037 ---------GCACAGCTCTGGCG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1497798 14 + 3644372 ---------GCACAGCTCCGGCG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1451880 14 - 10304083 ---------GCACAGCTCCGGTG i cerAty1.NW_012000820v1 I 200 C 0 s chlSab2.chr14 1531802 14 - 107702431 ---------GCACAGCTCTGGCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1024183 14 - 2200435 ---------GCACAGCTCCGGCG i manLeu1.NW_012103754v1 C 0 I 515 s colAng1.NW_012118821v1 1450877 14 - 13651311 ---------ACACAGCTCCGGTG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1441952 14 - 108792865 ---------ACACAGCCCCAGTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1270931 14 - 7082604 ---------ACACAGCACCAGTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1364236 14 + 1864846 ---------ACACAGCACCAGTG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 183400 14 + 287728 ---------GCACAGCACCAGTG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 964103 14 + 5252280 ---------ACCTGGCTGTGTGG i otoGar3.GL873658 I 3 C 0 s dasNov3.JH576208 1794815 19 + 4416731 ATTTTTACCATATAACTCT---- i dasNov3.JH576208 C 0 C 0 a score=505309.000000 s hg38.chr2_KI270774v1_alt 184562 45 + 223625 CTCCACAGCTCTGCATAACGGGATGCAGGAGGGGCTGGTTCCAGG s panTro5.chr2A 1481352 45 + 111504155 CTCCACAGCTCTGCATAACGGGATGCAGGAGGGGCTGGTTCCAGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1420210 45 + 114371477 CTCCACAGCTCTGCATAACGGGATGCAGGAGGGGCTGGTTCCAGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1444526 44 + 1464242 CTCCACAGCTCTGCATAACGGGATGCAGGA-GGGCTGGTTCCAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1172078 45 + 81552678 CTTCACAGCTCTGCATAACGGGATGCAGGAGGGGCTGGTTCCAGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1497878 45 + 108979918 CTTCACAGCTCTGCATAGCGGGATGCAGGAGGGGCTGGTTCCAGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 1469702 45 - 111193037 CTTCACAGCTCTGCATAGCGGGATGCAGGAGGGGCTGGTTCCAGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1497812 45 + 3644372 CTTCACAGCTCTGCATAGCGGGATGCAGGAGGGGCTGGTTCCAGG i macNem1.NW_012011978v1 C 0 I 240 s cerAty1.NW_012000820v1 1451894 45 - 10304083 CTTCACAGCTCTGCATAGCGGGATGCAGGAGGGGCTGGTTCCAGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1531816 45 - 107702431 CTTCACAGCTCTGCATAGCGGGATGCAGGAGGGGCTGGTTCCAGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1024712 45 - 2200435 CTTCACAGCTCTGCATAGCGGGATGCAGGAGGGGCTGGTTCCAGG i manLeu1.NW_012103754v1 I 515 C 0 s colAng1.NW_012118821v1 1450891 45 - 13651311 CTTCACAGCTCTGCATAGCGGGATGCAGGAGGGGCTGGTTCCAGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1441966 45 - 108792865 CTTCACAGCTCTGCATGATGGGATGCAGGAGGGGCTGGTTCCAGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1270945 45 - 7082604 CTTCACAGCTTTGCATGATGGAATGCAGGAGGGGCTGGTTCCAGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1364250 45 + 1864846 CTTCACAGCTCTGCATGATGGGATGCAGGAGGGGCTGGTTCCAGG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 183414 45 + 287728 CTTCACAGCTCTGCATGATGGGATGCAGGAGGGGCTGGTTCCAGG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 964117 33 + 5252280 CTGCACGGCTCTGCA---CGTGGTGCACAC--GGCTGG------- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1794834 43 + 4416731 --TCATAATTCTACATTAGGGAATGCAAATGGGGTGGTTTATAGG i dasNov3.JH576208 C 0 C 0 a score=313723.000000 s hg38.chr2_KI270774v1_alt 184607 34 + 223625 GGCAGCTTTAGCCAAGAAAGACCTT-CTAGGTTTA s panTro5.chr2A 1481397 34 + 111504155 GGCAGCTTTAGCCAAGAAAGACCTT-CTAGGTTTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1420255 34 + 114371477 GGCAGCTTTAGCCAAGAAAGACCTT-CTAGGTTTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1444570 34 + 1464242 GGCAGCTTTAGCCAAGAAAGACCTC-CTAGGTTTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1172123 34 + 81552678 GACAGCTTTAGCCAAGAAAGACCTT-CTAGGTTTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr13 1497923 34 + 108979918 GGCAGCTTTAGCCAGGAAAGACCTT-CTATGTTTA i rheMac8.chr13 C 0 N 0 s macFas5.chr13 1469747 34 - 111193037 GGCAGCTTTAGCCAGGAAAGACCTT-CTATGTTTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1498097 34 + 3644372 GGCAGCTTTAGCCAGGAAAGACCTT-CTATGTTTA i macNem1.NW_012011978v1 I 240 C 0 s cerAty1.NW_012000820v1 1451939 34 - 10304083 GGCAGCTTTAGCCAAGAAAGACCTT-CTATGTTTA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1531861 31 - 107702431 GGCAGCTTTAGCCAAGAAAGAC----CTATGTTTA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1024757 34 - 2200435 GGCAGCTTTAGCCAAGAAAGACCTT-CTATGTTTA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1450936 34 - 13651311 GGCAGCTTTAGCCAAGAAAGACCTT-CTATGTTTA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1442011 34 - 108792865 GGCAGCTTTAGCCAAGAAAGATGTT-ATATGTTTA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1270990 35 - 7082604 CACGGCTTTAGCCAAGGAAGATGTTAATTTGTTTA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1364295 34 + 1864846 CGCAGCTTTAGCCAAGAAAGATGTT-ATATGTTTA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 183459 34 + 287728 CGCAGCTTTAGCCAAGAAAGATGTT-ATATGTTTA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 964150 26 + 5252280 GGCCACTCCAG--------GATGTT-ACTTGTGAA i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1794877 33 + 4416731 CACGGTTTTA-TCAAAAAGAGTGTT-ATATGTTAA i dasNov3.JH576208 C 0 C 0 a score=164990.000000 s hg38.chr2_KI270774v1_alt 184641 14 + 223625 ACAGCCTTGACATG s panTro5.chr2A 1481431 14 + 111504155 ACAGCCTTGACATG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1420289 14 + 114371477 ACAGCCTTGACATG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1444604 14 + 1464242 ACAGTCTTGACATG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1172157 14 + 81552678 ACAGCCTTGACGTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 300 14 - 11509 ACAGCCTTGACATG i rheMac8.chrUn_NW_015079380v1 N 0 C 0 s macFas5.chr13 1469781 14 - 111193037 ACAGCCTTGACATG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1498131 14 + 3644372 ACAGCCTTGACATG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1451973 14 - 10304083 ACAGCCTTGACATG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1531892 14 - 107702431 ACAGCCTTGACATA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1024791 14 - 2200435 ACAGCCTTGACATG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1450970 14 - 13651311 ACAGCCTTGACATG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1442045 14 - 108792865 ACAGCCTTGACTTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1271025 14 - 7082604 ACAGCCTTGACATG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1364329 14 + 1864846 ACAGCCTTGACATG i cebCap1.NW_016107827v1 C 0 I 10 s aotNan1.NW_018513311v1 183493 14 + 287728 ACAGCCTTGACGTG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 964176 13 + 5252280 GGGGCCATGA-ATG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1794910 14 + 4416731 AAGGCCTTGGCATG i dasNov3.JH576208 C 0 C 0 a score=98708.000000 s hg38.chr2_KI270774v1_alt 184655 10 + 223625 GTTACCTGTA s panTro5.chr2A 1481445 10 + 111504155 GTTACCTGTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1420303 10 + 114371477 GTTACCTGTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1444618 10 + 1464242 GTTACCTGTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1172171 10 + 81552678 GTTACCTATA i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 314 10 - 11509 GTTACCTATA i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1469795 10 - 111193037 GTTACCTATA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1498145 10 + 3644372 GTTACCTATA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1451987 10 - 10304083 GTTACCTATA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1531906 10 - 107702431 GTTACCTATA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1024805 10 - 2200435 GTTACCTATA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1450984 10 - 13651311 GTTACCTATA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1442059 10 - 108792865 GTCACCTATA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1271039 10 - 7082604 GTCACCTATA i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 183507 10 + 287728 GTCACCTATA i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 964189 10 + 5252280 GATGTCTAGA i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1794924 10 + 4416731 GTTAGCTAAA i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1364343 10 + 1864846 I a score=60781.000000 s hg38.chr2_KI270774v1_alt 184665 15 + 223625 CATGAAACACTTTAA s panTro5.chr2A 1481455 15 + 111504155 CATAAAACACTTTAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1420313 15 + 114371477 CATAAAACACTTTAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1444628 15 + 1464242 CATAAAACACTTTAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1172181 15 + 81552678 CATAAAACACTTTAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 324 13 - 11509 CATAAA--ACTTTAA i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1469805 13 - 111193037 CATAAA--ACTTTAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1498155 13 + 3644372 CATAAA--ACTTTAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1451997 13 - 10304083 CATAAA--ACTTTAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1531916 13 - 107702431 CATAAA--ACTTTAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1024815 13 - 2200435 CATAAA--ACTTTAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1450994 15 - 13651311 CATAAAACACTTCAA i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 964199 2 + 5252280 -------------AA i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1794934 15 + 4416731 AATGTAATATTTCAA i dasNov3.JH576208 C 0 I 102 e aotNan1.NW_018513311v1 183517 0 + 287728 C e saiBol1.JH378218 1271049 0 - 7082604 C e cebCap1.NW_016107827v1 1364343 10 + 1864846 I e calJac3.chr14 1442069 0 - 108792865 C a score=374968.000000 s hg38.chr2_KI270774v1_alt 184680 64 + 223625 TAGCTGCTGCTAGATAGAGACAATTAAC---AGCCGATAGTCAATAGCTCCAATCCCTTGAAATTTC s panTro5.chr2A 1481470 64 + 111504155 TAGCTGCTGCAAGATAGAGACAATTAAC---AGCCGATAGTCAATAGCTCCAATCCCTTGAAATTTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1420328 64 + 114371477 TAGCTGCTGCAAGATAGAGACAATTAAC---AGCCGATAGTCAATAGCTCCAATCCCTTGAAATTTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1444643 64 + 1464242 TAGCTGCTGCAAGATAGAGACAATTAAC---AGCCGATAGTCAATAGCTCCAATCCCTTGAAATTTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1172196 67 + 81552678 TAGCTGCTGCAAGATAGAGACAATTAACAGTAGCCGATAGTCAATAGCTTCAATCCTTTGAAATTTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 337 67 - 11509 TAGCTGCTGCAAGATACAGACAATTAACAGTGGCCGATAGTCAATAGCTCCAATCCCTTGAAATTTC i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1469818 67 - 111193037 TAGCTGCTGCAAGATACAGACAATTAACAGTGGCCGATAATCAATAGCTCCAATCCCTTGAAATTTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1498168 67 + 3644372 TAGCTGCTGCAAGATACAGACAATTAACAGTGGCCGATAGTCAATAGCTCCAATCCCTTGAAATTTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1452010 67 - 10304083 TAGCTGCTGCAAGATACAGACAATTAACAGTGGCCGATAGTCAATAGCTCCAATCCCTTGAAATTTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1531929 67 - 107702431 TAGCTGCTGCAAGATACAGACAATTAACAGTGGCTGATAGTCAATAGCTCCAATCCCTTGACATTTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1024828 67 - 2200435 TAGCTGCTGCAAGATACAGACAATTAACAGTGGCCGATAGTCAATAGCTCCAATCCCTTGAAATTTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1451009 67 - 13651311 TAGCTGCTGCAAGATACAGACAATTAACAGTGGCCAATAGTCAATAGCTCCAATCCCTTGAAATTTC i colAng1.NW_012118821v1 C 0 C 0 s otoGar3.GL873658 964201 58 + 5252280 TAA-------GACACACAGGCACTAGCCAGAGCTCCAT--TCATGGGCTCCAGTCCCTGGAAAGTCC i otoGar3.GL873658 C 0 I 535 e aotNan1.NW_018513311v1 183517 0 + 287728 C e saiBol1.JH378218 1271049 0 - 7082604 C e cebCap1.NW_016107827v1 1364343 10 + 1864846 I e dasNov3.JH576208 1794949 102 + 4416731 I e calJac3.chr14 1442069 0 - 108792865 C a score=659734.000000 s hg38.chr2_KI270774v1_alt 184744 130 + 223625 TTGACCCttttcttatactt---cttttta-tttttttgagacagagtctcactctgtcacccaggctggagtgcagtgccgcaatctctgctcactgcaacctccgcttcctgagctcaagtgattctcctgc s panTro5.chr2A 1481534 124 + 111504155 TTGACCCtttt------ctt---cttttta-tttttttgagacagagtctcactctgtcacccaggctggagtgcagtgccgcaatctctgctcactgcaacctccgcttcctgggctcaagtgattctcctgc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1420392 124 + 114371477 TTGACCCtttt------ctt---cttttta-tttttttgagacagagtctcactctgtcacccaggctggagtgcagtgccgcaatctctgctcactgcaacctccgcttcctgggctcaagtgattctcctgc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1444707 124 + 1464242 TTGACCCtttt------cttatactttttattttttttgagacaga----ctctctggcacccacgctggagtgcagtggtgcaatctctgctcactgcaacctccacttcctgggctcaagtgattctcctgc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1172263 122 + 81552678 TTGA-Cttttt------ctt---cttttta-tttttttgagacagagtctcactctgtcacccaggctggagtgcagtggtacaatctctgctcactgcaacctccgcttcctgggctc-agtgattctcctgt i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 404 127 - 11509 TTTACCCTTGT------CTTATACttttta-tttttttgagacggagtctcactctgttgcccaggcaggagtgcagtggtgcaatctctgctcactacaacctctgcttcctgggctcaagtgattctcctgc i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1469885 127 - 111193037 TTTACCCTTGT------CTTATACttttta-tttttttgagacggagtctcactctgttgcccaggcaggagtgcagtggtgcaatctctgctcactacaacctctgcttcctgggctcaagtgattctcctgc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1498235 127 + 3644372 TTTACCCTTGT------CTTATACttttta-tttttttgagacggagtctcactctgttgcccaggcgggagtgcagtggtgcaatctctgctcactacaacctctgcttcctgggctcaagtgattctcctgc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1452077 127 - 10304083 TTTACCCTTGT------CTTATACttttta-tttttttgagacggagtctcactctgtcgcccaggcgggagtgcagtggtgcaatctctgctcactgcaacctctgcttcctgggctcaagtgattctcctgc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1531996 127 - 107702431 TTTACCCTTGT------CTTATACttttta-tttttttgagacagagtctcactctgtcacccaggctggagtgcagtggtgcaatctctgcttactgcaacttctgcttcctgggctcaagtgattctcctgc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1024895 127 - 2200435 TTTACCCTTGT------CTTATACttttta-tttttttgagacggagtctcactctgtcgcccaggcaggagtgcagtggtgtaatctctgctcactgcaacctctgcttcctgggctcaagtgattctcctgc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1451076 126 - 13651311 TTTA-CCTTGT------CTTATACttttta-tttttttgagacagagtctcactctgtcgcccaggcaggagtgcaatggtgcaatctctgctcactgcaacctctgcttcccggactcaagtgattctcctgc i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 183517 0 + 287728 C e saiBol1.JH378218 1271049 0 - 7082604 C e cebCap1.NW_016107827v1 1364343 10 + 1864846 I e otoGar3.GL873658 964259 535 + 5252280 I e dasNov3.JH576208 1794949 102 + 4416731 I e calJac3.chr14 1442069 0 - 108792865 C a score=1643477.000000 s hg38.chr2_KI270774v1_alt 184874 184 + 223625 ctcagcctcctg------agtagctgggattacaggcacccaccactgcacccagctcatttttgtatttttagtggagatg-ggatttcaccatgttggccaggctgggctcaaactcctgacctcaggtgatctacccacctcagcctcccaaagtgctgggattacaggcatgagccaccggacccga s panTro5.chr2A 1481658 190 + 111504155 ctcagcctcctgagtagtagtagctgggattacaggcacccaccactgcacccagctcatttttgtatttttagtggagatg-ggatttcaccatgttggccaggctgggctcaaactcctgacctcaggtgatctacccacctcagcctcccaaagtgctgggattacaggcatgagccaccggacctga i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1420516 163 + 114371477 ctcagcctcctgagtagtagtagctgggattacaggcacccaccactgcacccagctcatttttgtatttttagtggagatg-ggatttcaccatgttggccaggctgggctcaaactcctgacctcaggtgatctacccacctcagcctcccaaagtgctggg--------------------------- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1444831 184 + 1464242 ctcagcctcctg------agaggctgggattacaggcacccaccactgcacccagctcatttttgtatttttaatggagatg-ggatttcaccatgttggccaggctgggctcaaactcctgacctcaggtgatctacccacctcagcctcccaaagtgctgggattacaggcatgagccaccggacccga i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1172385 184 + 81552678 ctcagtctcctg------agtagctgggattacaggcacccaccattgcatccagctcatttttgtatttttagtggagagg-ggatttcaccatgttggccaggctgggctcaaaactctgacctcaggtgatctgcccaccttagcctcccaaagtgctgggattacaggcataagccaccagacccga i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 531 183 - 11509 ctcagcctcctg------agtagctgggattacaggtacccaccaccgtacctggctaatttttgtatttttagtggagacg-ggatttcaccatgttggccaggctggtctcaaactcctgacctcaggtgaccc-cccacctcagcctcccaaagtgttaggattagaggcgtgagccaccgcacccgg i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1470012 182 - 111193037 ctcggcctcctg------agtagctgggattacaggtaccca-caccgtacctggctaatttttgtatttttagtagagacg-ggatttcaccatgttggccaggctggtctcaaactcctgacctcaggtgaccc-cccacctcagcctcccaaagtgttgagattagaggcgtgagccaccgcacccgg i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1498362 183 + 3644372 ctcggcctcctg------agtagctgggattacaggtacccaccaccgtacctggctaatttttgtatttttagtagagacg-ggatttcaccatgttggccaggctggtctcaaactcctgacctcaggtgaccc-cccacctcagcctcccaaagtgttgggattagaggcgtgagccaccgcacccgg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1452204 184 - 10304083 ctcagcctcctg------agtagctgggattacaggtacccaccaccgtacctggctaatttttgtatttttagtagagacg-ggatttcaccatgttggccaggctagtctcaaactcctgacctcaggtgatccacccacctcagcctcccaaagtgttgggattagaggcgtgagccaccgcacccgg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1532123 183 - 107702431 ctcggcctcctg------agtagctgggattacaggcacccaccaccgtacctggctaatttttgtatttttagtagagaca-ggatttcaccatgttggccaggctggtctcaaactcctgacctcaggtgaccc-cccacctcagcctcccgaagcgttgggattagaagcgtgagccaccgcacccgg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1025022 183 - 2200435 ctcggcctcctg------agtagctgggattacaggtacccaccaccgtacctggctaatatttgtatttttagtagagacg-ggatttcaccatgttggccaggctggtctcaaactcctgatctcaggtgaccc-cccacctcagcctcccaaagtgttgggattagaggcgtgagccaccgcacccgg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1451202 184 - 13651311 ctcggcctcctg------agtagctgggattacaggcacccaccaccgtacctggctaatttttgtatttttagtagagacg-ggatttcaccatgttggccaggctggtctcaaactcctgacctcaggtgacccccccacctcagcctcccaaagtgttgggattagaggcttgagccaccacacccgT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1442069 185 - 108792865 ctcagccccctg------agtagccatgattataggtgcccaccaccgcacccggctaacttttgtatttttagtagagatgcaggtttcaccacattggccaggttggtctcaaactcctgacctcaggtgatccacccacctcggcctcccaaagtcctgggattacaggcttgagccacggtgcccgg i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1271049 185 - 7082604 ctcatccccctg------agtagccatgattacaggcgtccaccaccgcacccggctaacttttttatttttagtagagatgcaggtttcaccacattggccaggttggtctcaaactcctgacctcaggtgatccacctacttcggcctcccaaagttctgggattacaggcttgagccacgatgcctgg i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1364353 185 + 1864846 ctcagccccctg------agtagccatgattacaggtgcccaccactgctcccggctaacttttgtatttttagtagagatgtgggtttcaccacattggccagattggtctcaaacttctgacctcaggtgatccacccactttggcctccaaaagttctaggattacaggcttgagccacggtgcccgg i cebCap1.NW_016107827v1 I 10 C 0 s aotNan1.NW_018513311v1 183517 185 + 287728 ctcagccccctg------agtagccatgattacaggcgcccaccactgcacccggctaacttttgtattttcagtagagacgcgggtttcaccacattggccaggttggtctcaaactcctgacctcagatgatccacccacctcggcctcccaaagttctgggattacaggcgtgagccacggtgcccag i aotNan1.NW_018513311v1 C 0 C 0 e otoGar3.GL873658 964259 535 + 5252280 I e dasNov3.JH576208 1794949 102 + 4416731 I a score=3561005.000000 s hg38.chr2_KI270774v1_alt 185058 421 + 223625 cTTCTTATACTCTTATAGAATGGTTGTCATTATCAATAATGGCATTATTAAAGACCGTACTGTTTAGAAAGCCTGAGATATCCCTGACACCCTGCTAGTTGTCA----TAAGCATCGTCTTTGATT-CCACGCCCATTTTTCACAGCTGACATAATGATACCCATTCTGTAACTGAGAAAA-------CCAGCA--TGGGCCAAGCCTCCCCC--------------GGGGTTAGGAGTGGGCAGTCC------CATCCAATGCAGCC-----------------------------CCTCACCC--------------------TGGGGAGCAGGTG---GCCAGCCGACCACCCCAGCTGGCCTTCGAGGCCTCACGGGTCTCCGGCACTGGGTCGCCTGAG----CACTGCCCAGGTTCGCACATTCTCATC-------------------GTCCTGGGGTGG---------CCGAGTCGGGGACCA-AGACCCTGT-GGCCTATGT--GGACCCC---------------------------------------------------GGCTCCTCCACTCAGCGGTGAGAC s panTro5.chr2A 1481848 421 + 111504155 cTTCTTATACTCTTATAGAATGGTTGTCATTTTCAATAATGGCATTATTAAAGACTGTACTGTTTAGAAAGCCTGAGATATCCCCGACACCCTGCTAGTTGTCA----CAAGCATCGTCTTTGATT-CCACGCCCATTTTTCACAGCTGACATAATGATACCCATTCTGTAACTGAGAAAA-------CCAGCA--TGGGCCAAGCCTCCCCC--------------TGGGTTAGGAGTGGGCAGTCC------CATCCAATGCAGCC-----------------------------CCTCACCC--------------------TGGGGAGCAGGTG---GCCAGCAGACCACCCCAGCTGGCCTTCGAGGCCTCACGGGTCTCCGGCACTGGGTCGCCTGAG----CACTGCCCAGGTTCGCACATTCTCATC-------------------GTCCTGGGGTGG---------CCGAGTCGGGGGCCA-AGACCCTGT-GGCCTATGT--GGACCCC---------------------------------------------------GGCTCCTCCACTCAGCGGTGAGAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1420679 375 + 114371477 ----------------------------------------------attaaagacCGTACTGTTTAGAAAGCCTGAGATATCCCCGACACCCTGCTAGTTGTCA----CAAGCATCGTCTTTGATT-CCACGCCCATTTTTCACAGCTGACATAATGATACCCATTCTGTAACTGAGAAAA-------CCAGCA--TGGGCCAAGCCTCCCCC--------------TGGGTTAGGAGTGGGCAGTCC------CATCCAATGCAGCC-----------------------------CCTCACCC--------------------TGGGGAGCAGGTG---GCCAGCAGACCACCCCAGCTGGCCTTCGAGGCCTCACGGGTCTCCGGCACTGGGTCGCCTGAG----CACTGCCCAGGTTCGCACATTCTCATC-------------------GTCCTGGGGTGG---------CCGAGTCGGGGGCCA-AGACCCTGT-GGCCTATGT--GGACCCC---------------------------------------------------GGCTCCTCCACTCAGCGGTGAGAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1445015 421 + 1464242 cTTCTTATACTTTTATAGAATGGTTGTCATTTTCAATAATGGCATTATTAAAGACCGTACTGTTTAGAAAGCCTGAGATATCCCCGACACCCTGCTAGTTGTCA----TAAGCATCGTCTTTGATT-CCACGCCCATTTTTCACAGCTGACATAATGATACCCATTCTGTAACTGAGAATA-------CCAGCA--TGGGCCAAGCCTCCCCC--------------CGGGTTAGGAGTGGGCAGTCC------CATTCAATGCAGCC-----------------------------CCTCACCC--------------------TGGGGAGCAGGTG---GCCAGCAGACCACCCCAGCTGGCCTTCGAGGCCTCACGGGTCTCCGGCACTGGGTCACCTGAG----CACTGCCCAGGTTCACACATTCTCATC-------------------GTCCTGGGGTGG---------CCGAGTCGGGGGCCA-AGACCCTGT-GGCCTATGT--GGACCCC---------------------------------------------------GGCTCCTCCACTCAGCGGTGAGAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1172569 419 + 81552678 cTTCTTATACTGTTATAGAATGGTTGTCATTATCAATAATGTCATTTTTAAAGACTGTGCCATTTAGAAAGCCTGAGATATCCCCGACACCCTGCTAGCTGTCA----TAAGCATCGTCTTTGATT-CCACGCCCGTTTTTCCCAGCCGACATAATTATACCCATTCTGTAACTGAGAAAA-------CCAGCA--TGGGCC-AGCCTCCCCC---------------GGGTCAGGAGTGGGCAGTCC------TGTCCAGTGCAGCT-----------------------------CCTCGCCC--------------------TGGGGAGCAGGGG---GGCAGCAGACCACCCCAGCTGGCCTTCCAGGCCTCACGGGTCTCCGGCACTGGATCGCCTGAG----CACTGCTCAGGTTCACACATTCTCACC-------------------ATCCTGGGGTGG---------CCGAGTCGGGGGCCA-AGACCCTGT-GGCCTATGT--GGACCCC---------------------------------------------------GGCTCTTCCACTCAGCGGCGAGAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 714 433 - 11509 cTTCTTATACTC--ATAGAGTGGTTGTCATTATCAATAATGTCATTATTAAAGACTGTCCTCTTTAGAAAGCCTGAGATATCCCCAACACCCTGCTAGTTGTCA----TAAGCACCATCTTTGATT-CCAGGCCCGTTTTTCACAACAGACATAATGATACCCATTCTGTAACTGAGAAAA-------CCAGCT--GGCACCAAGGCTCCCCCCGACCCCAGAGCCCTGAGTTAGGAATGGGCAGTCC------CACCCAGTGCAGCC-----------------------------CCTCACCC--------------------TGGGGAGCAGGAG---GGCAGCAGGCCACCCCAGCTGACCTTCAAGGCCTTGCAGGTCTCCGGCACTGGGTCGCCTGAG----CGCTGCCCAGGTTCGCACATTCTCCTC-------------------GTCCTGGGGTGG---------CCGAGTCGGGGGCCA-AGTCCCTGT-GGCCTATGT--GGACCCC---------------------------------------------------GGCTCTTCCACTCAGCGGTGAGAT i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1470194 435 - 111193037 cTTCTTATACTCTTATAGAGTGGTTGTCATTATCAATAATGTCATTATTAAAGACTGTCCTCTTTAGAAAGCCTGAGATATCCCCAACACCCTGCTAGTTGTCA----TAAGCACCATCTTTGATT-CCAGGCCCGTTTTTCACAACAGACATAATGATACCCATTCTGTAACTGAGAAAA-------CCAGCT--GGCACCAAGGCTCCCCCCGACCCCAGAGCCCTGAGTTAGGAATGGGCAGTCC------CACCCAGTGCAGCC-----------------------------CCTCACCC--------------------TGGGGAGCAGGAG---GGCAGCAGGCCACCCCAGCTGACCTTCAAGGCCTTGCAGGTCTCCGGCACTGGGTCGCCTGAG----CGCTGCCCAGGTTCGCACATTCTCCTC-------------------GTCCTGGGGTGG---------CCGAGTCGGGGGCCA-AGTCCCTGT-GGCCTATGT--GGACCCC---------------------------------------------------GGCTCTTCCACTCAGCGGTGAGAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1498545 435 + 3644372 cTTCTTATACTCTTATAGAGTGGTTGTCATTATCAATAATGTCATTATTAAAGACTGTCCTCTTTAGAAAGCCTGAGATATCCCCAACACCCTGCTTGTTGTCA----TAAGCACCATCTTTGATT-CCAGGCCCGTTTTTCACAACAGACATAATGATACCCATTCTGTAACTGAGAAAA-------CCAGCT--GGCACCAAGGCTCCCCCTGACCCCAGAGCCCTGAGTTAGGAATGGGCAGTCC------CACCCAGTGCAGCC-----------------------------CCTCACCC--------------------TGGGGAGCAGGAG---GGCAGCAGGCCACCCCAGCTGACCTTCAAGGCCTTGCAGGTCTCCGGCACTGGGTCGCCTGAG----CGCTGCCCAGGTTCGCACATTCTCCTC-------------------GTCCTGGGGTGG---------CCGAGTCGGGGGCCA-AGTCCCTGT-GGCCTATGT--GGACCCC---------------------------------------------------GGCTCTTCCACTCAGCGGTGAGAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1452388 434 - 10304083 cTTCTTATACTCTTATAGAGTGGTTGTCATTATCAATAATGTCATTATTAAAGACTGTCCTCTTTAGAAAGCCTGAGATAGCCCCAACACCCTGCTAGTTGTCA----TAAGCACCATCTTTGATT-CCAGGCCCGTTTTTCACCACAGACATAATGATACCCATTCTGTAACTGAGAAAA-------CCAGCT--GGCACCAAGGCTCCCCC-GACCCCAGAGCCCTGAGTTAGGAATGGGCAGTCC------CACCCAGTACAGCC-----------------------------CCTCATCC--------------------TGGGGAGCAGGAG---GGCAGCAGGCCACCCCAGCTGACCTTCAAGGCCTTGCAGGTCTCCGGCACTGGGTCGCCTGAG----CGCTGCCCAGGTTCGCACATTCTCCTC-------------------ATCCTGGGGTGG---------CCGAGTCGGGGGCCA-AGTCCCTGT-GGCCTATGT--GGACCCC---------------------------------------------------GGCTCTTCCACTCAGCGGTGAGAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1532306 486 - 107702431 cTTCTTATCCTCTTACAGAATGATTGTCATTATCAGTAATGTCATTATTAAAGACTGTCCTCTTTAGAAAGCCTGAGAGATCCCCAACACCCTGCTAGTTGTCA----TAAGCACCATCTTTGATT-CCAGGCCCGTTTTTCACAACAGACGTAATGATACCCATTCTGTAACTGAGAAAA-------CCAGCT--GGGACCAAGGCTCCCCCCGACCCCAGAGCCCTGAGTTAGGAGTGGGTAGTCC------CACCTAATACAGCC-----------------------------CCTCACCC--------------------TGGGGAGCAGGAG---GGCAGCAGGCCACCCCAGCTGACCTTCAAGGCCTCACAGGTCTCCGGCACTGGGTCGCCTGAG----CGCTGCCCAGGTTCGCACATTCTCCTC-------------------GTCCTGGGGTGG---------CCGAGTCGGGGGCCA-AGTCCCTGT-GGCCTATGT--GGACCCCGTGGCCTGTGGACCCCCGTGGCCTGTGGACCCCGTGGCCTGTGGACCCTGTGGCTCTTCCACTCAGCAGTGAGAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1025205 433 - 2200435 cTTCTCATACTCTTATAGAGTGGTTGTCATTATCAATAATGTCATTATTAAAGACTGTCCTCTTCAGAAAGCCTGAGATATCCCCAACACCCTGCTAGTTGTCA----TAAGCACCATCTTTGATT-CCAGGCCCGTTTTTCACAACAGACATAATGATACCCATTCTGTAAC--AGAAAA-------CCAGCT--GGAACCAAGGCTCCCCCCGACCCCAGAGCCCTGAGTTAGGAATGGGTAGTCC------CACCCAGTGCAGCC-----------------------------CCTCACCC--------------------TGGGGAGCAGGAG---GGCAGCAGGCCACCCCAGCTGACCTTCAAGGCCCCGCAGGTCTCCGGCACTGGGTCGCCTGAG----CGCTGCCCAGGTTCGCACATTCTCCTC-------------------GTCCTGGGGTGG---------CCGAGTCGGGGGCCA-AGTCCCTGT-GGCCTGTGT--GGACCCC---------------------------------------------------AGCTCTTCCACTCAGCGGTGAGAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1451386 433 - 13651311 CTTCTTATACTCTTATAGAATGGTTGTCATTATCAATAATGTCATTATTAAAGACTGTACTCTTTAGAAAGCCTGAGATATCCCCAACACTCTGCTAGTTGTCA----TAAGCACCATCTTTGATT-CTATGCCTGTTTTTCACAACAGACATAATGATACCGATTCTGTAACTGAGAAAA-------CCAGCT--GGGACCAAGACTCCCCCTGATCCCAGAGCCCTGAGTTAGGAGTGGTCAGTCC------CACCCAATGCAGCC-----------------------------CCTCA-CC--------------------TGGGCAGCAGGTG---GGCAGCAGACCACCCCAGCTGACC-TCAAGGCCTCGCAGGTCTCCGGCACTGGGTCGCCTGGG----TGCTGCCCAGGTTCACACATTCTCATC-------------------GTCCTGGGGTGG---------CCGAGTCGGGGGCCA-AGTCCCTGT-GGCCTATGT--GGACCCC---------------------------------------------------GGCTCTTCCACCCAGTGGTGAGAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1442254 430 - 108792865 cTTCTGACATTCTTATGTAATGGTTGTCGTTATCAATAACGTCATTATTAATGACTGTACCGTTTAGAAAGCCTGCGCGATCCT-GACACCCCGATAGTTTTTA----TAAGCA-CA---TTGATC-CCATGCCTGTTTTTCATAGCAGACATTAGGACACCCATTCTCTATCTGAGAAAA-------GCAGGG--TGGGCCAAGCCTCCTCA---GCCCAGAGCCCTGTGTTTGGAGTGGGGAGTCC------CATCCAATGCAGCC-----------------------------CCTCACCC--------------------TGGGGAGCAGGTG---GGCAGCAGACCACACCAGCTGGCCTTCGAGGCTGTGCAGGTCTCTGGCTCCGGGTCACCTGAGTGCTCACTGCTCAGGATTGCAGGTTCTCATT-------------------GTCCTGGGGTGG---------TCGGGTCTGGAGCTA-AGT-CCTGT-GGCCTATGT--GGACTCC---------------------------------------------------AGCTCTTCCACTCAGCGGCGAGAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1271234 433 - 7082604 cTTCTCACACTCTTATGCAATGGTTGTCATTATCAATAACGTCATTATTAATGACTGTACCGTTTAGCAAGGCTGTGCGATTCC-GACACCCTGATAGTTGTCC----TAAGCATCA---TTGATT-CCATGCTCGTTTTTCATAGCCGACATTATGACACCCATTCTGTATCTGAGAAAA-------GCAGGGCCTGGGCCAAGCCTCTGCT---GCCCAGAGCCCTGTGTTAGGAGCGGGGAGTCC------CATCCAGTGCAGCC-----------------------------CCTCACCC--------------------TGGGGTGCAGGTG---GGCAGCAGACCACACCAGCTGGCCTTCGAGGCTGCGCAGGTCTCTGGCCCCGGGTCACCTGAGTGCTCACTGCTCAGGATTGCAGGCGTTCATT-------------------GTCCTGGCGTGG---------CCGGGTCTGGAGCTA-AGT-CCTGT-GGCCTATGT--GGACTCC---------------------------------------------------GGCTCTTCCACTCAGCAGCGAGAC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1364538 413 + 1864846 cTTCTTACACTCTTGTGTAATGGTTGTCATTATCAATAACGTTATTATTAATGACTGTACCGTTTAGAAAGCCTGCGCGGGCCC-AACACCCTGATGGTTGTCA----TAAGCATCA---TTGATT-CCATGCCCGTTTTTCATAGCCGACAT---GGCAACCATTCTGTTTCTGAGAAAA-------GCGGGG--TAGGCCAAGCCTCCCCC---GCCCAGAGCCCTGCGTTAGGAGTGGGGAGT--------------------CC-----------------------------CCTCACCC--------------------TGGGGAGCAGGTG---GGCAGCAGACCACACTAGCTGGCCTTCGAGGCTGCGCAGGTCTCTGGCCCTGGGTCACCTGAGCGCTCACTGCTCAGGATTGCAGGTTCTCATT-------------------GTCCTGGGGTGC---------CCAGGTCTGGAGCTA-AGT-CCT-T-GGCCTATGT--GGACGCC---------------------------------------------------AGCTCTTCCACTCAGTGGCGATAT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 183702 396 + 287728 cTTCTTACACTCTTATATAATGGTTGTCATTATCAACAACATCATTATTAATGACTGTACCATTTAGAAAGCCTGCGTGATCCC-AGCACCCTGATAGTTGTCA----TAAGCATCA---TTGATT-CCATGCCTGTTTTTCACAGCCGACGTTATGACACCCATTCTGTATCTGAGAAAA-------GCAGGG--TGGGCCAAGCCTCCCCC---GCCCAGAGCCCTGCGTTAGGAGTGGGGAG---------------------CC-----------------------------CCTCACCC--------------------TGGGGAGCAGGTG---GGCAGCAGACCACACCAGCCGGCCTTCGA------------------CCCTGGGTCACCTGA--GCTCACTGCTCAGGATTGCAGGTTCTCCTT-------------------GTCCTGGGGTGG---------CCGGGTCTGGAGCTC-AGT-CCTGT-GGTCTCTGT--GGACTCC---------------------------------------------------AGCTCTTCTACTCAGCGGCGGGAC i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1795051 514 + 4416731 CTTTCAAtattattattg--ttgttgttattaccattattatcattattaatagctgtactattttcagtgcctcctttactct-agatctttgatagattttacttttatgcatgatttttgattcccatagcatttcttcacaatctacataagtatactcattttataaattagaaaactcaggcccag----ggaggcaagtatcttgc----tgtagatctctcagttagtactgggcagtctggcataaacccaggaccccctTGTATCATATTCCAAACCTTCCCAACATTCTCATCCATGCACTAGAACGTAGACAACAGAAAACAGAGGCCTAGCAGCAGACCCCCTGATTTGATCT-------------GATTTGATATACAGTGACA-CTGAA----CATTGCATAAGCTTGAACTTTTCTCTCTCTCGCCTTTAGGGAAACTACCAGGtggtggtaaagagcactgagtctggtgccagagtctttgtctacctgtgcaagagtccc---------------------------------------------------agcttttccatgcagttgtgtgcc i dasNov3.JH576208 I 102 I 119 e otoGar3.GL873658 964259 535 + 5252280 I a score=1161039.000000 s hg38.chr2_KI270774v1_alt 185479 128 + 223625 TGGGGAGGGTCCCTCCACCTCTCCCAGTGCTTTTGCTCTGTCTAGGGATGTCGTCAGCACCAGGGCCCCAGGAGTGCAGGGAGGTTGCTGCCTCCAGCCTGGCCCTCGGCGGAGGCTGCACCCAGGCC s panTro5.chr2A 1482269 128 + 111504155 TGGGGAGAGTCCCTCCACCTCTCCCAGTGCCTTCGCTGTGTCCAGGGGTGTTGTCAGCACCAGGGCCCCAGGAGTGCAGGGAGGTTGCTGCCTCCAGCCTGGCCCTCGGCGGAGGCTGCACCCAGGCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1421054 128 + 114371477 TGGGGAGAGTCCCTCCACCTCTCCCAGTGCCTTCGCTGTGTCCAGGGGTGTCGTCAGCACCAGGGCCCCAGGAGTGCAGGGAGGTTGCTGCCTCCAGCCTGGCCCTCGGCGGAGGCTGCACCCAGGCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1445436 128 + 1464242 TGGGGAGAGTCCCTCCACCTCTCCCAGTGCCTTCGCTCTGTCTAGGGGTGTCGTCAGCACCAGGGCCCCAGGAGTGCAGGAAGGTTGCTGCCTCCAGCCTGGCCCTCGGCGGAGGCTGCACCCAGGCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1172988 128 + 81552678 TGGGGAGAGTCCCTCCACCCCTCCCAGTGCCTTCGCTCTGTCTGGGGGTGTCATCAGCACCAGGGCCCCAGGAGTGCAGGGAGGTTGCTGCCTCCAGCCTGGCCCTCGGCGGAGGCTGCACCCAGGCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 1147 128 - 11509 TGGGGGGAGTCCCTCCACCCCTCCCAGTACCTTTGCTCTGTCTGGGGGTGTCGTCGGCACCAGGACCCCAGGAGCGCAGACAGGTTGCTGCCCCCAGCCTGGCCCTCAGCAGAGACTGCACCCAGGCC i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1470629 128 - 111193037 TGGGGAGAGTCCCTCCACCCCTCCCAGTACCTTTGCTCTGTCTAGGGGTGTCGTCGGCACCAGGACCCCAGGAGCGCAGACAGGTTGCTGCCCCCAGCCTGGCCCTCAGCAGAGACTGCACCCAGGCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1498980 120 + 3644372 TGGGGAGAGT--------CTCTCCCAGTACCTTTGCTCTGTCTGGGGGTGTCGTCGGCACCAGGACCCCAGGAGCGCAGACAGGTTGCTGCCCCCAGCCTGGCCCTCAGCAGAGACTGCACCCAGGCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1452822 128 - 10304083 TGGGGAGAGCCCCTCCACCCCTCCCAGTACCTTCGCTCTGTCTGGGGGTGTCGTCAGCACCAGGGCCCCAGGAGCGCAGGCAGGTTGCTGCCCCCAGCCTGGCCCTCGGCAGAGACTGCACCCAGGCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1532792 128 - 107702431 TGGGGAGAGTCCCTCCACCCCTCCCAGTACCTTTGCTCTGTCTGGGGGTGTCGTCGGCACCAGGACCCCAGGAGCACAGGCAGGTTGCTGCCCCCAGCCTGGCCCTCGGCAGAGACTGCACCCAGGCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1025638 128 - 2200435 TGGGGAGAGCCCCTCCACCCCTCCCAGTACCTTCGCTCTGTCTGGGGGTGTCGTCGGCACCAGGACCCCAGGAGCGCAGGCAGGTTGCTGCCCCCAGCCTGGCCCTCGGCAGAGACTGCACCCAGTCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1451819 128 - 13651311 TGGGGGAAGTCCCTCCACCCCTCCCAGTACCTTCGCTCTGTCTGGGGGTGTCGTCAGCACCAGAACCCCAGGAGTGCAGGCAGGTGGCTGTCCCCAGCCTGGCCCTCGGCAGAGACTGCACCCAGGCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1442684 123 - 108792865 TGGGGAGAGTCCCTTGACCCCTCCCGGTGCC----CTCTGTCTGGAGGTGTCGCCAGCACCAGGGACACAGGAGTGCCGGGAGGTTTTGGCCCCCAGCCTGGCCCTCGGT-GAGGCTGCACCCAGGCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1271667 123 - 7082604 GGGGGAGAGTCCCTCGACCCCTCCCAGTGCC----CTCTGTCTGGGGGTGTCGCCAGCACCAGGGTCACAGGAGTGCCGGGAGGTTTTAGCCCCCAGCCTGGCTCTCAGT-GAGGCCACACCCAGGCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1364951 123 + 1864846 CGGGGAGAGTCCCTCGACCCCTCCCGGTGCC----CTCTGTCTGGGGGTGTCACCAGCACCAGGGTCACAGGAGTGCCGGGAGGTTTCGGCCCCCAGCCTGGCCCTCGGT-GAGGCTGGACCCAGGCC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 184098 123 + 287728 TGGGGAGAGTCCCTCGACCCCTCCCAGTGCC----CTGTGTCTGGGGGCGTCACCAGCACCAGGGTCACAGGAGTGCCGGGAGGTTTCGGCCCCCAGCCTGGCCCTCGGT-GAGGCTTCACCCAGGCC i aotNan1.NW_018513311v1 C 0 C 0 e otoGar3.GL873658 964259 535 + 5252280 I e dasNov3.JH576208 1795565 119 + 4416731 I a score=245362.000000 s hg38.chr2_KI270774v1_alt 185607 23 + 223625 AGCTCTGTTCCCTCCAGACAGAG s panTro5.chr2A 1482397 21 + 111504155 AGCTCTGTTCCCTCCAGAC--AG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1421182 21 + 114371477 AGCTCTGTTCCCTCCAGAC--AG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1445564 23 + 1464242 AGCTCTGTTCCCTCCAGACAGAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1173116 23 + 81552678 AGCTCTGTTCCCTCCAAACAGAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 1275 23 - 11509 AGCTCTGTTCCCTCCAGACAGAG i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1470757 23 - 111193037 AGCTCTGTTCCCTCCAGACAGAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1499100 23 + 3644372 AGCTCTGTTCCCTCCAGACAGAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1452950 23 - 10304083 AGCTCTGTTCCCTCCAGACAGAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1532920 23 - 107702431 AGCTCTGTTCCCTGCAGACAGAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1025766 23 - 2200435 AGCTCTGTTCCCTCCAGACAGAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1451947 23 - 13651311 AGCTCTGTTCCCTCCAGACAGAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1442807 23 - 108792865 AGCTCCATTCCCTCCGGACAGAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1271790 23 - 7082604 AGCTCTGTTCCCTCTGGACAGAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1365074 23 + 1864846 AGCTCCGTTCCCTCCGGACAGAG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 184221 23 + 287728 AGCTCCGTTCCCTCCGGACAGAG i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1795684 23 + 4416731 ATTTTTATTCCCTCCTAACAGAG i dasNov3.JH576208 I 119 I 84 e otoGar3.GL873658 964259 535 + 5252280 I a score=628666.000000 s hg38.chr2_KI270774v1_alt 185630 81 + 223625 CAGCTCCTGGAAGAGCTCGTGTTCCCCACACTGACAGCACCTGCTCCATTTAGAGAATG-CGCAC-TGGGCATGTAGAGAAGA s panTro5.chr2A 1482418 81 + 111504155 CAGCTCCTGGAAGAGCTCGTGTCCCCCACACTGACAGCACCTGCTCCATTTAGAGAACG-TGCAC-TGGGCATGTAGAGAAGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1421203 81 + 114371477 CAGCTCCTGGAAGAGCTCGTGTCCCCCACACTGACAGCACCTGCTCCATTTAGAGAACG-TGCAC-TGGGCATGTAGAGAAGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1445587 81 + 1464242 CAGCTCCTGGAAGAGCTCGTGTCCCCCACACTGACAGCACCTGCTCCATTTAGAGAACG-CGCAC-TGGGCATGTAGAGAAGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1173139 81 + 81552678 CAGCTCCTGGAAGAGGTCACGTCCCCAGCACTGACAGCACCTGTTCCATTTGGAGAATG-TGCAC-TGGGCATGTGGAGCAGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 1298 80 - 11509 CAGCTCCTGGAAGAGCACGTGT-CCCAGCACTGACAGCACCTGTGCCATTCAGAGAACA-CACAC-TGGGCGTGTGGAGCAGA i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1470780 80 - 111193037 CAGCTCCTGGAAGAGCACGTGT-CCCAGCACTGACAGCACCTGTGCCATTCAGAGAACA-CACAC-TGGGCGTGTGGAGCAGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1499123 80 + 3644372 CAGCTCCTGGAAGAGCACGTGT-CCCAGCACTGACAGCACCTGTGCCATTCAGAGAACA-CACAC-TGGGCGTGCGGAGCAGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1452973 80 - 10304083 CAGCTCCTGGAAGAGCACGTGT-CCCAGCACTGACAGCACCTGTGCCATTCAGAGAACA-TACAC-TGGGCATGTGGAGCAGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1532943 80 - 107702431 CAGCTCCTGGAAGAGCATGTGT-CCCAGCACTGACAGCACCTGTGCCATTCAGAGAACA-CACAC-TGGGCGTGTGGAGCAGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1025789 80 - 2200435 CAGCTCCTGGAAGAGCACGTGT-CCCAGCACTGACAGCACCTGTGCCATTCAGAGAACA-TACAC-TGGGCATGTGGAGCAGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1451970 81 - 13651311 CAGCTCCTGGAAGAGCATGTGTCCCCAGCACTGACAGCACCTGTGCCATTCAGAGAACA-CACAC-GGGGCGTGTGGCGCAGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1442830 80 - 108792865 CAGCTCCAGGAAGAACATGCAT-CCCAGCAGTGACAGCACCTGTCCCACTTAGAGAACG-CGCACATGGGCCTGGAGCGTGG- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1271813 80 - 7082604 CAGCTCCAGGGAGAGCACACGT-CCCGGCACTGACAGCGCCTGTCCCACTTAGAGAGTGTTGCACCTGGGCATGGAG-GGGG- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1365097 80 + 1864846 CAGCTCAGGGAAGAGCACATGT-CCTGGCACTGACAGTGCCTGTCCCACCTAGAGAACG-CGCACCTGGGCATGTAGAGGGG- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 184244 80 + 287728 CAGCTCCCGGAAGAGCACGCGT-CCCAGCACCGACAGCGCCTGTTCCACTTAGAGAACG-CGCACCTGGGCATGGAGAGCGG- i aotNan1.NW_018513311v1 C 0 C 0 e otoGar3.GL873658 964259 535 + 5252280 I e dasNov3.JH576208 1795707 84 + 4416731 I a score=632998.000000 s hg38.chr2_KI270774v1_alt 185711 63 + 223625 CCTGTGACACGCTACAGCTTCTTTTCTAAAACTGGCCAGA----AAAGGAACATTATTTGAACAAAA s panTro5.chr2A 1482499 63 + 111504155 CGTGTGACACGCTACGGCTTCTTTTCTAAAACTGGCCAGA----AAAGGAACATTATTTGAACAAAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1421284 63 + 114371477 CGTGTGACACGCTACGGCTTCTTTTCTAAAACTGGCCAGA----AAAGGAACATTATTTGAACAAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1445668 63 + 1464242 CCTGTGACACGCTATGGCTTCTTTTCTAAAACTGGCCAGA----AAAGGAACATTATTTGAACAAAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1173220 63 + 81552678 TCTGTGACATGCTACTGCTTGTTTTCTAAAATTGGCCAGA----AAAGGAATATTATTTGAACAAAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 1378 63 - 11509 CCTGTGACACGCTCCTGCTTGTTTTCTAAAATTGGCCAGA----AAAGGAACATTATTTGAACAAAA i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1470860 63 - 111193037 CCTGTGACACGCTCCTGCTTGTTTTCTAAAATTGGCCAGA----AAAGGAACATTATTTGAACAAAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1499203 63 + 3644372 CCTGTGACACGCTCCTGCTTGTTTTCTAAAATTGGCCAGA----AAAGGAACATTATTTGAACAAAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1453053 63 - 10304083 CCTGTGACACGCTCCTGCTTGTTTTCTAAAATTGGCCAGA----AAAGGAACATTATTTGAACAAAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1533023 63 - 107702431 CCTGTGACATGCTCCTGCTTGTTTTCTAAAATTGGCCAGA----AAAGGAACATTATTTGAACAAAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1025869 63 - 2200435 CCTGTGACACGCTCCTGCTTGTTTTCTAAAATTGACCAGA----AAAGGAACATTATTTGAACAAAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1452051 63 - 13651311 CCTGTGACACGCTCCTGCTTGTTCTCTAAAATTGGCCAGA----AAAGGAACATTATTTGAACAAAA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1442910 62 - 108792865 -CTCTTACACGCCACTGCCTGTTTTCTAAAATTGGCCAGA----AAAGGAACATGATTCGAACAAAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1271893 62 - 7082604 -CTCTTACCCGCTACTGCCTGTTTTCTAAAATTGGCCCGA----AAAGGAATGTGATTTGAACAAAA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1365177 62 + 1864846 -CTCCTACACGCTACTGCCTGTTTTCCAAAATTGGCCAGA----AAAGGAACGTGATTTGAACAAAA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 184324 62 + 287728 -CTCTTACACGCTACCCCCTGTTTTCTAAAATTGGCCAGA----AAAGGAACATGATTTGAACAAAA i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1795791 67 + 4416731 CTTTTGACATTCTTCTGTTTGCTTCCTGGAATTGACCAGAAAAGAAAGAAATGTTATTTGAAAAAAA i dasNov3.JH576208 I 84 I 6 e otoGar3.GL873658 964259 535 + 5252280 I a score=906940.000000 s hg38.chr2_KI270774v1_alt 185774 107 + 223625 TGTACAGCAGGTTATCTGGAAACATACGCCTAGGGGATGAGATACTAGGTTGTAGGATTCTTGTGCAGGGGGAGCAGGA---------GCAGGA--GGGGACCCCACATCCTCACTGG s panTro5.chr2A 1482562 107 + 111504155 TGTACAGCAGGTTATCTGGAAACATACGCCTAGGGGATGAGATACTAGGTTGTAGGATTCTTGTGCAGGGGGAGCAGGA---------GCAGGA--GGGGACCCCACATCCTCACTGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1421347 107 + 114371477 TGTACAGCAGGTTATCTGGAAACATACGCCTAGGGGATGAGATACTAGGTTGTAGGATTCTTGTGCAGGGGGAGCAGGA---------GCAGGA--GGGGACCCCACATCCTCACTGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1445731 95 + 1464242 TGTACAGCAGGTTATCTGGAAACATACGCCTAGGGGATGAGATACTAGGTTGTAGGATTCTTGTGCAGGG------GGA---------GCAGGA--GGGGACCCCACATCC------G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1173283 101 + 81552678 TGTACAGCAGGTTATCTGGAAACATAAGCCTAGGGGATGAGGTACTAGGTTGTAGGATTCGTGTGCAGGG------GGA---------GCAGGA--GGGGACTCCACATCCTCACTGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 1441 100 - 11509 TGTACAGCAGGTTATCTGGAAATAGAAGCCTAGGGGATGAGGTACTAGA-TGTAGGATTCGCGTGCAGGG------AGA---------GCAGGA--GGGGACGCACCATCCTCACTGG i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1470923 100 - 111193037 TGTACAGCAGGTTATCTGGAAATAGAAGCCTAGGGGATGAGGTACTAGA-TGTAGGATTCGCGTGCAGGG------AGA---------GCAGGA--GGGGACGCACCATCCTCACTGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1499266 100 + 3644372 TGTACAGCAGGTTATCTGGAAATAGAAGCCTAGGGGATGAGGTACTAGA-TGTAGGATTCGCGTGCAGGG------AGA---------GCAGGA--GGGGACGCACCATCCTCACTGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1453116 100 - 10304083 TGTACAGCAGGTTATCTGGAAATAGAAGCCTAGGGGATGAGGTACTAGA-TGTAGGATTCGCGTGCAGGG------AGA---------GCAGGA--GGGGACGCACCATCCTCACTGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1533086 100 - 107702431 TGTACAGCAGGTTATCTGGAAATAGAAGCCTAGGGGATGAGGTACTAGA-TGTAGGATTCGAGCGCAGGG------AGA---------GCAGGA--GGGGACGTACCATCCTCACGGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1025932 100 - 2200435 TGTACAGCAGATTATCTGGAAATAGAAGCCTAGGGGATGAGGTACTAGA-TGTAGGATTCGTGTTCAAGG------AGA---------GCAGGA--GGGGACGCACCATCCTCACTGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1452114 100 - 13651311 TGTACAGCAGGTTATCTGGAAATAGAAGCCTAGGGGATGAGGGACTAGA-TGTAGGATTCGCGTGCAGGG------AGA---------GCAGGA--GGGGAAGCACCATCCTCACTGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1442972 101 - 108792865 CACACAGCAGATTATCTGGAAACACACGCCTGGGGAATGAGGCACTAGGTTATAGGCTTCAGGTGCAGGG------AGA---------GCAGGA--GGGGACACCCCATCCTCACTGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1271955 103 - 7082604 TGCACAGCAGATTATCTGGAAACACACGCCTAGGGAATGAGGTGCTAGGCTCTAGGATTCGGGTGCAGGG------AGA---------GCAGGAGGGGGGACACCCCATCCTCACTGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1365239 80 + 1864846 TGCACAGCAGATTATC---------------------TGAGGTACTAGGTTGTCGGATTCAGGTGCAGGG------AGA---------GCAGGA--GGGGACACCCCATCCTCACTGG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 184386 101 + 287728 TGCACAGCAGATTATCTGGAAACACACGCCTAGGGGATGAGGTACTAGGCTGTAGGACTCAGGTGCAGGG------AGA---------GCAGGA--GGGGACGCCCCATCCTCACTGG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 964794 99 + 5252280 TGTGTAATGAGTTGGCTGGAAACATGAGTCTAGGACATCAGGTAACTGATCACAGGTATTAGGGCCAGGA--GACCAGG---------GCAGGT--GG------CACGTCCTCACCTG i otoGar3.GL873658 I 535 C 0 s dasNov3.JH576208 1795864 110 + 4416731 TATAGAGAAAGTTATTTGGAAACTTGAGCCTGAGAAAGCAAGTGATAGGTTATAGATTTTAGGCAGGAGA------AGACTGTGAGATGTAGCA--GGACATTCCTCAGTCACAGTGG i dasNov3.JH576208 I 6 I 1335 a score=212674.000000 s hg38.chr2_KI270774v1_alt 185881 20 + 223625 CGGT----GGCAGGTGGCCCCAGT s panTro5.chr2A 1482669 20 + 111504155 CAGT----GGCAGGTGGCCCCAGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1421454 20 + 114371477 CAGT----GGCAGGTGGCCCCAGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1445826 20 + 1464242 CAGT----GGCAGGTGGCCCCAGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1173384 20 + 81552678 CGGT----GGCAGGTGGCCCCAGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 1541 20 - 11509 CGGT----GGCAGGTGGCCCCAGT i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1471023 20 - 111193037 CGGT----GGCAGGTGGCCCCAGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1499366 20 + 3644372 CGGT----GGCAGGTGGCCCCAGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1453216 20 - 10304083 TGGT----GGCAGGTGGCCCCAGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1533186 20 - 107702431 CGGT----GGCAGGTGGCCCCAGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1026032 20 - 2200435 CGGT----GGCAGGTGGCCCCAGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1452214 20 - 13651311 CGGT----GGCAGGTGGCCCCAGT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1443073 20 - 108792865 CAGG----GACAGGCGTCCCCAGT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1272058 20 - 7082604 CGGT----GGCAGGTGGCCGCAGC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1365319 20 + 1864846 CGGT----GGCAGGTGGCCCCAGG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 184487 20 + 287728 CGGG----GGCAGGTGGCCCCAGT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 964893 24 + 5252280 TAGTGCAGGGCATGGAACCCCAGT i otoGar3.GL873658 C 0 I 637 e dasNov3.JH576208 1795974 1335 + 4416731 I a score=834201.000000 s hg38.chr2_KI270774v1_alt 185901 91 + 223625 CCTTGCTCTCAGAGGACCTGCC-------------------GGCCAGCTGGGAGCATCTGCCTGGGCGAAGCAGACCCTGCCCCACCCTCACCCTGGCCCCTTCCTGCCC s panTro5.chr2A 1482689 91 + 111504155 CCTTGCTCTCAGAGGACCTGCC-------------------GGCCAGCTGGGAGCATCTGCCTGGGCGAAGCAGACCCTGCCCCACCCTTACCCTGGCCCCTTCCTGCCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1421474 91 + 114371477 CCTTGCTCTCAGAGGACCTGCC-------------------GGCCAGCTGGGAGCATCTGCCTGGGCGAAGCAGACCCTGCCCCACCCTCACCCTGGCCCCTTCCTGCCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1445846 109 + 1464242 CCTCGCTCTCAGAGGACCTGCCGGCCAGCTGGGAGCATCTGGGCCAGCTGGGAGCATCTGCCTGGGAGAAGCAGACCCTGCCCCACCCTCACCCTGGCCCCTTCCTG-CC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1173404 90 + 81552678 CCTTGCTCTCAGAGGACCTGTC-------------------GGCCAGCTGGGAGCATCTGCCTGGGCGAAGCAGACCCTG-CCCACCCTCACCCTGGCCCCTTCCTGCCG i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 1561 98 - 11509 CCTTGCTCTCAGAGGACCTGGA------------GCATCTGGGCCAGCTGGGAGTCTCTGCTTGGGTGAAGCGGACCCTGCCCTACCCTCCCCCTGGCCCCTTCCTGCCC i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1471043 98 - 111193037 CCTTGCTCTCAGAGGACCTGGA------------GCATCTGGGCCAGCTGGGAGTCTCTGCTTGGGTGAAGCGGACCCTGCCCTACCCTCCCCCTGGCCCCTTCCTGCCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1499386 98 + 3644372 CCTTGCTCTCAGAGGACCTGGA------------GCATCTGGGCCAGCTGGGAGTCTCTGCTTGGGTGAAGCGGACCCTGCCCTACCCTCCCCCTGGCCCCTTCCTGCCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1453236 98 - 10304083 CCTTGCTCTCAGAGGACCTGGA------------GCATCTGGGCCAGCTGGGAGTCTCTGCTTGGGCGAAGCGGACCCTGCCCTACCCTCCCCCTGGCCCCTTCCTGCCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1533206 98 - 107702431 CTTTGCTCTCAGAGGACCTGGA------------GCATCTGGGCCAGCTGGGAGCCTCTGCTTGGGCGAAGCGGACCCTGCCCCACCCTCCCCCTGGCCCCTTCCTGCCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1026052 98 - 2200435 CCTTGCTCTCAGAGGACCTGGA------------GCATCTGGGCCAGCTGGGAGTCTCTGCTTGGGCGAAGCGGACCCTGCCCTACCCTCCCCCTGGCCCCTTCCTGCCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1452234 98 - 13651311 CCTGGCTCTCAGAGGACCTGGA------------GCATGTGGGCCAGCTGGGAGTCTCTGCTTGGGCAAAGCAGACCCTGCCCCACCCTCACCCTGGCCCCTTCCTGCCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1443093 91 - 108792865 CCTTGCTCTCAGAGGAACGGCT-------------------GGCCGGCTGGGAGAATCTGCCGGGGGAAAGCAGACCCTGCTCCACCCTCACCCTAGCCCCTTCCTTCCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1272078 91 - 7082604 CCTTGCTCTCAGAGGAACTGCC-------------------GGCCAGCTGGGAGCATCTGCCTGGGCACAGCAGACCCTGCTCCACACTCACCCTGGCCCCTTCCTGCCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1365339 90 + 1864846 CCTTGCTCTCAGAGGAACT-TC-------------------GGCCAGGTGGGAGCATCTGCCTGGCCAAAGCAGACGCTGCTCCACCCTCACCCTGGCCCCTTCCTGCCT i cebCap1.NW_016107827v1 C 0 I 11 s aotNan1.NW_018513311v1 184507 90 + 287728 CCTTGCTCTCAGAGGAACTGCC-------------------GGCCAGCTGGGAGCATCTGCCTGGGCAAAGCAGACCCTGCTCCACCC-CACCCTGGCCCCTTCCTGCCC i aotNan1.NW_018513311v1 C 0 C 0 e otoGar3.GL873658 964917 637 + 5252280 I e dasNov3.JH576208 1795974 1335 + 4416731 I a score=125898.000000 s hg38.chr2_KI270774v1_alt 185992 17 + 223625 CCGTGTC--------------------CTGCACTTGG s panTro5.chr2A 1482780 17 + 111504155 CCATGTC--------------------CTGCACTTGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1421565 17 + 114371477 CCGTGTC--------------------CTGCACTTGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1445955 17 + 1464242 CCGTGTC--------------------CTGCACTTGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1173494 17 + 81552678 CCATGTC--------------------CTGCACTTGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 1659 17 - 11509 CTGTGTC--------------------CTGCACTTGG i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1471141 17 - 111193037 CTGTGTC--------------------CTGCACTTGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1499484 37 + 3644372 CTGTGTCACTTGGCCAAATTCCACATTTGGCACTTGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1453334 17 - 10304083 CTGTGTC--------------------CTGCACTTGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1533304 17 - 107702431 CTGTGTC--------------------CTGCAGTTGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1026150 17 - 2200435 CTGTGTC--------------------CTGCACTTGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1452332 17 - 13651311 CTGTGTC--------------------CTGCACTTGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1443184 17 - 108792865 CTGTGTC--------------------TTGCCCTTGG i calJac3.chr14 C 0 I 7 s saiBol1.JH378218 1272169 15 - 7082604 --GTGTC--------------------CTGCCCGTGG i saiBol1.JH378218 C 0 I 7 s aotNan1.NW_018513311v1 184597 17 + 287728 CTGTGTC--------------------CTGCCCTTGG i aotNan1.NW_018513311v1 C 0 I 7 e cebCap1.NW_016107827v1 1365429 11 + 1864846 I e otoGar3.GL873658 964917 637 + 5252280 I e dasNov3.JH576208 1795974 1335 + 4416731 I a score=2435864.000000 s hg38.chr2_KI270774v1_alt 186009 269 + 223625 CCAAATTCCACAT-------TCCCAGGCAGACCCTGATTTCCTCCAGGAAGTCTCCTGTGACTC---GGGCCTGAGTGAGCCCCAGTGTGTGGACTCCCTGCAGGCTCAGAGCCCGTGGCCAGCGCACATCTGTCTGCTCCTCATCACCTTTTCGGATGTGCCGGGAGCAGGGGGCGGCC-----------------------GGTTCCCCCTAGACCAGGTGGGATG------------------------------GCAGGCAAAGGGCTGACCTCCCCAGAGAGAAGCACCTCCCA----------------------------GAACGGGGGTCGCTCGCGGGAGATGG-GGGTGCA s panTro5.chr2A 1482797 299 + 111504155 CCAAATTCCACATTCCCCTATCCCAGGCAGACCCTGATTTCCTCCAGGAAGGCTCCTGTGACTC---GGGCCTGAGTGAGCCCCAGTGTGTGGACTCCCTGCAGGCTCAGAGCCCATGGCCAGCGCACATCTGTCTGCTCCTCCTCACCTTTTCGGATGTGCCGGGAGCAGGGGGCGGCCACACAACAGCAGAGGTGGTGCCTGGTTCCCCCTAGACCAGGTGGGATG------------------------------GCAGGCAAAGGGCTGACCTCCCCAGAGAGAAGCAACTCCCA----------------------------GAACGGGGGTCGCTCGCGGGAGATGG-GGGTGCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1421582 299 + 114371477 CCAAATTCCACATTCCCCTATCCCAGGCAGACCCTGATTTCCTCCAGGAAGGCTCCTGTGACTC---GGGCCTGAGTGAGCCCCAGTGTGTGGACTCCCTGCAGGCTCAGAGCCCATGGCCAGCGCACATCTGTCTGCTCCTCCTCACCTTTTCGGATGTGCCGGGAGCAGGGGGCGGCCACACAACAGCAGAGGTGGTGCCTGGTTCCCCCTAGACCAGGTGGGATG------------------------------GCAGGCAAAGGGCTGACCTCCCCAGAGAGAAGCACCTCCCA----------------------------GAACGGGGGTCGCTCGCGGGAGATGG-GGGTGCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1445972 300 + 1464242 CCAAATTCCACATTCCCCTATCCCAGGCAGACCCTGATTTCCTCTAGGAAGGCTCCTGTGACTC---AGGCCTGAGTGAGCCCCAGTGTGTGGACTCCCTGCAGGCTCAGAGCCCACGGCCAGCGCACATCTGTCTGCTCCTCATCACCTTTTCGGATGTGCCGGGAGCAGGGGGCGGCCACACAACAGCAGAGGTGGTGCCCGGTTCCCCCTAGACCAGGTGGGATG------------------------------GCAGGCAAAGGGCTGACCTCCCCAGAGAGAAGCACCTCCCA----------------------------GAACGGGGGTCACTCGCGGGAGATGGTGGGTGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1173511 272 + 81552678 CCACATTCCACCTTCCCCTATCCCAGGCAAACCCTAATTTCCTCCAGGAAGGCTCCTGTGACTC---GGGCCTGAGCGAGCCCCAGTGTGTGGACTCCCTGCAGGCTCAGAGCCCACGGCCAGCGCACATCTGTCTGCTCCTCATTACCTTTTCGGATGTGCGGGGAGCAGGGG--GGC------------------------AGTTACCCCTAGACCAGGTGGGATG------------------------------GCAGGCAAAAGGCTGACCTCCGCAGAGAGAAGCACCTCCCA----------------------------GAACGGGGG-CGCTCACGGGAGAAGG-GGGTGCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 1676 299 - 11509 CCAAATTCCACATTCCCCTATCCCAGGCAGACCCTAATTTCCTCCAGGAAGGCTCCTGTGACTT---GGGCCTGAGTGAACCCCAGTGTGTGGACTCCCTGCAGGCTCAGAGCCCACGGCCAGCATGTGTCCGTCTTCTCCTCATCACCTTTTCAGATGTGCAGGGAGCAGGGGGCGGCCACACAACAGCAGAGGTGGTGCCTGGTTCCCCCTAGACCGGGTGGGGTG------------------------------TCAGGCAAAGGGCTGACCTCCCCAGACAGAAGCATCTCCCA----------------------------GAACGGGGGTCACACGGGAGAGAAGG-GGGTGTG i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1471158 299 - 111193037 CCAAATTCCACATTCCCCTATCCCAGGCAGACCCTAATTTCCTCCAGGAAGGCTCCTGTGACTT---GGGCCTGAGTGAACCCCAGTGTGTGGACTCCCTGCAGGCTCAGAGCCCACGGCCAGCATGTGTCCGTCTTCTCCTCATCACCTTTTCAGATGTGCAGGGAGCAGGGGGCGGCCACACAACAGCAGAGGTGGTGCCTGGTTCCCCCTAGACCGGGTGGGGTG------------------------------TCAGGCAAAGGGCTGACCTCCCCAGACAGAAGCATCTCCCA----------------------------GAACGGGGGTCACATGGGAGAGAAGG-GGGTGTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1499521 294 + 3644372 CCAAATTCCACATTCCCCTATCCCAAGCAGACCCTAATTTCCTCCAGGAAGGCTCCTGTGACTT---GGGCCTGAGTGAACCCCAGTGTGTGGACTCCCTGCAGGCTCAGAGCCCACGGCCAGCATGTGTCCGTCTTCTCCTCATCACCTTTTCAGATGTGCAGGGAGCAGGGGGCGGCCACACAACAGCAGAGGTGGTGCCTGGTTCCCCCTAGACC-----GGGTG------------------------------TCAGGCAAAGGGCTGACCTCCCCAGACAGAAGCATCTCCCA----------------------------GAATGGGGGTCACACGGGAGAGAAGG-GGGTGTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1453351 299 - 10304083 CCAAATTCCACATTCTCCTATCCCAGGCAGACCCTAATTTCCTCCAGGAAGGCTCCTGTGACTT---GGGCCTGAGTGAACCCCAGTGTGTGGACTCCCTGCAGGCTCAGAGCCCACGGCCAGCGTGCGTCTGTCTTCTCCTCATCACCTTTTCAGATGTGCAGGGAGCAGGGGGCGGCCACACAACAGCAGAGGTGGTGCCTGGTTCCCCCTAGACCGGGTGGGGTG------------------------------TCAGGCAAAGGGCTGACCTCCCCAGACAGAAGCATCTCCCA----------------------------GAACGGGGGTCACACAGGAGAGAAGG-GGGTGCG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1533321 298 - 107702431 CCAAATTCCACATTCCCCTATCCCAGGCAGACCCTAATTTCCTCCAGGAAGGCTCCTGTGACTT---GGGCCTGAGTGAACCCCAGTGTGTGGACTCCCTGCAGGCTCAGAGCCCACGGCCAGCGTGTGTCCGTCTTCTCCTCATCACCTTTTCAGATGTGCAGGGAGCAGGGGGCGGCCACACAACAGCAGAGGTGGTGCCTGGTTCCCCCTAGACCGGGTGGGGTG------------------------------GCAGGCAAAGGGCTGACCTCCCCAGACAGAAGCACCTCCCA----------------------------GAACGGGGGTCACACGGGAGAGAA-G-GGGTACA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1026167 299 - 2200435 CCAAATTCCACATTCCCCTATCCCAGGCAGACCCTAATTTCCTCCAGGAAGGCTCCTGTGACTT---GGGCCTGAGTGAACCCCAGTGTGTGGACTCCCTGCAGGCTCAGAGCCCACGGCCAGCGTGTGTCCGTCTTCTCCTCGTCACCTTTTCAGATGTGCAGGGAGCAGGGGGCAGCCACACAACAGCAGAGGTGGTGCCTGGTTCCCCCTAGACTGGGTGGGGTG------------------------------TCAGGCAAAGGGCTGACCTTCCCAGACAGAAGCATCTCCCA----------------------------GAACGGGGGTCACACGGGAGAGAAGG-GGGTGCG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1452349 327 - 13651311 CCAAATTCCACATTCCCCTACCCCAGGCAGACCCTAATTTCCTCCAGGAAGGCTCCTGTGACTT---GGGCCTGAGTGAGCCCCAGTGTGTGGACTGCCTGCAGGCTCAGAGCCCACGGCCAGCGTGCATCCACCTTCTCCTCATCACCTTTTCAGATGTGCAGGGAGCAGGGGGCGGCCACACAACAGCAGAGGTGGTGCCTGGTTTCCCCTAGACTGGGTGGGGTG------------------------------GCAGGCAAAGGGCTGACCTCCCCAGACAGAAGCACCTCCCAGAACGAGGGTCCCATGGGAGAGAAGCCGGAACGGGGGTCCCATGGGAGAGAAGG-GGGTGCG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1443208 297 - 108792865 -------CCACATTCCCTTATCCCAGGCAGACCCTAATTTCCTCGAGGAAGGCTCCTGTGACTGCTGGGGCCTGAGTGAGCCCCAGTGTGTGGACTCCCTGCAGGCTCAGAGCCTGTGGCCAACGAGCTTC---CTGCTGCTTATCACC-TTTCAGATGTGTAGGGAGCA-GGGGCGGCCATACAACAGCA-----GGTGCCCAGTTCCCCTTAGATCGGGTGGGGTGGGGCGGGT------------------GGGCGCAGGTGAGGGGCCAGCCTCCCCAGAGAGAAGCACCTCCCA----------------------------GAAAGGGGCTCACTTGAGGGAGGAGG-GGGCACG i calJac3.chr14 I 7 C 0 s saiBol1.JH378218 1272191 281 - 7082604 -------CCACATTCCCCTATCCCAGGCAGACCCTAATTTCCTCGAGGAAGGCTCCTGTGACTCCTGGGGCCTGAGTGAGCCCCAGTGTGTGGACTCCCTGTGGGCTCAGGGCCTGTGGCCA--GAGCTTC---CTGCTGCTCATCACC-TTTCAGATGTGTAGGGAGCA--GGGCGGCCACGCAGCAGCA-----GGTGCCCAGTGCCCCCTGGATGCATCGGGGGG------------------------------GCAGGCGAGGGGCCAGCCTCCCCAGAGAGAAGCACCTCCCA----------------------------GAAAGGGGCTCGCCTGGGGGCGGA-G-GAGCACG i saiBol1.JH378218 I 7 C 0 s cebCap1.NW_016107827v1 1365440 309 + 1864846 -------CCACATTCCCCTATCCCAGGCAGACCCTGATTTCCTCGAGGAAGGCTCCTGTGACTACTGGGGCCTGAGTGAGCCC--GTGTGTGGACTCCCTGCAGGCTCAGAGCCTGCAA-CA--GAGCTTT---CTGCTGCTCATCACC-TTTCAGACGTGTAGGGAGGA--GGGCGGCCACACAACAGCA-----GGTGCCCGGCTCCCCCTGGATCTGGCGGCAGGTGCCCGGCTCCCCCTGGATCTGGCAGGGGGACAGGCGAGGGGCCAGGCTCCACAGAGAGAAGCACCTCCCA----------------------------GAAAGGGACTCGCTTGGGGGAGGAGG-GGGCACG i cebCap1.NW_016107827v1 I 11 C 0 s aotNan1.NW_018513311v1 184621 281 + 287728 -------CCACATTCCCCTAACCCAGACAGACCCTAATTTCCTCGAGGACGGCTCCTGTGACTACTGGGGCCTGAGTGAGCCCCGGTGTGTGGACTCCCTGCAGGCTCAGAGCCTGTGGCCAGCGAGCTTT---CTGCTGCTCGTCACC-TTTCAGACGTGTAGGGAGCA-GGGGCGGCCACACGACAGCA-----GGTGCCCTGTTCCCCCTAGATCGGGTGGGGGG-------------------------------CAGGCGAGGGGCCAGCCTCCCC--AGAGAAGCACCTCCCG----------------------------GAAAGGGGCTCGCCTGGGGGAAGA-G-GGGCACA i aotNan1.NW_018513311v1 I 7 C 0 e otoGar3.GL873658 964917 637 + 5252280 I e dasNov3.JH576208 1795974 1335 + 4416731 I a score=302248.000000 s hg38.chr2_KI270774v1_alt 186278 36 + 223625 GCCGCTTCCTCTCACGTGTG---TGGCCTTGTGTGTCTG s panTro5.chr2A 1483096 36 + 111504155 GCCGCTTCCTCTCACATGTG---TGGCCTTGCGTGTCTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1421881 36 + 114371477 GCCGCTTCCTCTCACGTGTG---TGGCCTTGCGTGTCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1446272 36 + 1464242 GCCGCTTCCTCTCACGTGTG---TGGACTTGCTTGTCTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1173783 36 + 81552678 GCCGCTTCCTCTCACCTGTA---TGGCCTTGTGTGTCTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 1975 36 - 11509 GCTGCTTCCTCTCACGTGTG---TGGCCTTGTGTGTCTG i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1471457 36 - 111193037 GCTGCTTCCTCTCACGTGTG---TGGCCTTGTGTGTCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1499815 36 + 3644372 GCTGCTTCCTCTCACGTGTG---TGGCCTTGTGTGTCTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1453650 36 - 10304083 GCTGCTTCCTCTCACGTGCG---TGGCCTTGTGTGTCTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1533619 36 - 107702431 GCTGCTTCCTCTCACGTGTG---TGGCCTTGTGCGTCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1026466 36 - 2200435 GCTGCTTCCTCTCACGTGTG---TGGCCTTGTGTGTCTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1452676 36 - 13651311 GCTGCTTCCTCTCATGGGTG---TGGCCTTGTGTGTCTA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1443505 36 - 108792865 GCCGCTTCCTCTCACATGTG---TGGCGTTTCATGTCTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1272472 35 - 7082604 GCCACTGCCTCTCACGTATG---TGGCCTTTTGT-TCTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1365749 35 + 1864846 GCCGCTTCCTCTCACATGTG---TGGCCTTTCGT-TCTG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 184902 19 + 287728 T-----------------TG---TGGCCTTTCGTGTCTG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 965554 36 + 5252280 GCCACCACCCCCCATGGCTGTCCTGGCCCTGTGTAT--- i otoGar3.GL873658 I 637 C 0 e dasNov3.JH576208 1795974 1335 + 4416731 I a score=2711440.000000 s hg38.chr2_KI270774v1_alt 186314 244 + 223625 GCAGATGTGAACGAGTGTGCAGACGGTG-CCCACCCCCCCTGCCACGCCTCTGCGAGGTGCAGAAACACCAAAGGCGGCTTCCAGTGTCTCTGCGCGGACCCCTACGAGTTAGGAGACGATGGGAGAACCTGCGTAGGTGAGGCTGTTCCC-----CTCTCTCTCTGTC----CGTCCATTTGCGAGTTTTTGTAAAATGAAGAAAAGTGTGT-TCAAGTTAGGCAACTGTCAATCACCATCTTGATTGGGAAGG s panTro5.chr2A 1483132 244 + 111504155 GCAGATGTGAACGAGTGTGCAGACGGTG-CCCACCCCCCCTGCCACGCCTCTGCGAGGTGCAGAAACACCAAGGGCGGCTTCCAGTGCCTCTGCGCGGACCCCTACGAGTTAGGAGACGATGGGAGAACCTGCGTAGGTGAGGCTGTTCCC-----CTCTCTCTCTGTC----CGTCCATTTGCGAGTTTTTGTAAAATGAAGAAAAGTGTGT-TCAAGTTAGGCAACTGTCAATCACCATCTTGATTGGGAAGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1421917 244 + 114371477 GCAGATGTGAACGAGTGTGCAGACGGTG-CCCACCCCCCCTGCCACGCCTCTGCGAGGTGCAGAAACACCAAGGGCGGCTTCCAGTGCCTCTGCGCGGACCCCTACGAGTTAGGAGACGATGGGAGAACCTGCGTAGGTGAGGCTGTTCCC-----CTCTCTCTCTGTC----CGTCCATTTGCGAGTTTTTGTAAAATGAAGAAAAGTGTGT-TCAAGTTAGGCAACTGTCAATCACCATCTTGATTGGGAAGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1446308 248 + 1464242 GCAGATGTGAACGAGTGTGCAGACGGTGCCCCACCCCCCCTGCCACGCCTCTGCGAGGTGCAGAAACACCAAGGGCGGCTTCCAGTGCCTCTGCGCAGACCCCTACGAGTTAGGAGACGATGGGAGAACCTGCGTAGGTGAGGCTGTTCCC-----CTCTCTCTCTCTCTCTTTGTCCATTTGCGAG-TTTTGTAAAATGAAGAAAAGTGTGT-TCAAGTTAGGCAACTGTCAATCACCATCTTGATTGGGAAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1173819 244 + 81552678 GCAGATGTGAACGAGTGTGCAGACGGCG-CCCACCCCCCCTGCCACGCCTCCGCGAGGTGCAGAAACACCAAGGGCGGCTTCCAGTGCCTCTGTGCGGACCCCTATGAGTTAGGAGACGATGGGAGAACCTGCATAGGTGAGGCTGTTCCC-----CTCTCTCTCTGTC----CGTCCATTTGCGGGTTCTTGTAAAATGAAGAAAAGTGTGT-TCAAGTTAGGCAACTGTCAATCACCATCTTGATTGGGAAGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 2011 244 - 11509 GCAGATGTGAACGAGTGTGCAGACGGTG-CCCACCCACCCTGCCACACCTCTGCGAGGTGCAGAAACACCAAGGGCGGCTTCCAGTGCCTCTGCGCGGACCCCTACGAGTTAGGAGGCGATGGGAGAACCTGCGTAGGTGAGTCTGCTCCC-----CTCCCTCTCTGTC----CATCTACTTGCAAGTTTTTGTAAAATGAAGAAAAGTGTGT-TCAAGTTAGGCAACTGTCAATCACCATCTTGATTGGGAAGG i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1471493 244 - 111193037 GCAGATGTGAACGAGTGTGCAGACGGTG-CCCACCCACCCTGCCACGCCTCTGCCAGGTGCAGAAACACCAAGGGCGGCTTCCAGTGCCTCTGCGCGGACCCCTACGAGTTAGGAGACGATGGGAGAACCTGCGTAGGTGAGTCTGCTCCC-----CTCCCTCTCTGTC----CATCTATTTGCAAGTTTTTGTAAAATGAAGAAAAGTGTGT-TCAAGTTAGGCAACTGTCAATCACCATCTTGATTGGGAAGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1499851 242 + 3644372 GCAGATGTGAACGAGTGTGCAGACGGTG-CCCACCCACCCTGCCACGCCTCTGCGAGGTGCAGAAACACCAAGGGCGGCTTCCAGTGCCTCTGCACGGACCCCTACGAGTTAGGAGACGATGGGAGAACCTGCGTAGGTGAGTCTGCTCCC-----CTCCCTCTCTGTC----CATCTATTTGCAAGTTTTTGTAAAATGAAGAAAA--GTGT-TCAAGTTAGGCAACTGTCAATCACCATCTTGATTGGGAAGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1453686 244 - 10304083 GCAGATGTGAACGAGTGTGCAGACGGTG-CCCACCCACCCTGCCACGCCTCTGCGAGGTGCAGAAACACCAAGGGCGGCTTCCAGTGCCTCTGCGCGGACCCCTACGAGTTAGGAGACGATGGGAGAACCTGCGTAGGTGAGTCTGCTCCC-----CTCCCTCTCTGTC----CATCTATTTGCGAGTTTTTGTAAAATGAAGAAAAGTGTGT-TCAAGTTAGGCAACTGTCAATCACCATCTTGATTGGGAAGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1533655 244 - 107702431 GCAGATGTGAACGAGTGTGCAGACGGTG-CCCATCCACCCTGCCACGCCCCTGCGAGGTGCAGAAACACCAAGGGCGGCTTCCAGTGCGTCTGCTCGGACCCCTACGAGTTAGGAGACGATGGGAGAACCTGCGTAGGTGAGTCTGCTCCC-----CTCCCTCTCTGTC----CATCTATTTGCGAGTTTTTGTAAAATGAAGAAAAGTGTGT-TCAAGTTAGGCAACTGTCAATCACCATCTTGATTGGGAAGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1026502 244 - 2200435 GCAGATGTGAACGAGTGTGCAGACGGTG-CCCACCCACCCTGCCACGCCTCTGCGAGGTGCAGAAACACCAAGGGCGGCTTCCAGTGCCTCTGCGTGGACCCCTATGAGTTAGGAGACGATGGGAGAACCTGCATAGGTGAGTCTGCTCCC-----CTCCCTCTCTGTC----CATCTATTTGCGAGTTTTTGTAAAATGAAGAAAAATGTGT-TCAAGTTAGGCAACTGTCAATCACCATCTTGATTGGGAAGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1452712 244 - 13651311 GCAGATGTGAATGAGTGTGCAGACGGCA-CCCACCCACCCTGCCACGCCTCTGCGAGGTGCAGAAACACCAAGGGCGGCTTCCAGTGCCTCTGCGTGGACCCCTACGAGTTAGGAGACGATGGGAGAACCTGCGTAGGTGAGTCTGCTCCC-----CTCCCTCTCTGTC----CATCTATTTGCCAGTTTTTGTAAAATGAAGAAAAGTGTGT-TCAAGTTAGGCAAGTGTCAATCACCATATTGATTGGGAAGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1443541 235 - 108792865 GCAGATGTGAACGAGTGTGCAGACAGTG-CCAACCCCCCCTGCCACGCCTCCGCGAGGTGCAGAAACACCAAGGGAAGCTTCCGGTGCCTCTGCGAGGACCCCCACGAGTTAGGAGACGATGGGAGGACCTGCATAGGTGAGGCTGCTTCC-------CTCTCTCTGTC----CGTCCATTTGTGAGTTTTTGTAAAATGAAGAAAAGTGCAT-TCAAGTGAGGCAACTG-------TCATCTTGATTGGGAAGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1272507 234 - 7082604 GCAGATGTGAACGAGTGTGCAGACAGCG-CCCACCCCCCCTGCCACGCCTCCGCGACGTGCAGAAACACCAAGGGAAGCTTCCGGTGCCTCTGCGAGGACCCCTACGAGTTAGGAGATGACGGGAGGACCTGCATAGGTGAGGCAGC-------------CCCCCCGTC----CGTCCATTTGTGAGTTTTTGTAAAATGAGGAAAAGTG--T-TCAAGTGAGGCAACTGTCACTCATCATCTTGATCGGGAGGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1365784 246 + 1864846 GCAGATGTGAACGAGTGTGCAGACAGTG-CCCACCCCCCCTGCCATGCCTCCGCGAGGTGCAGAAACACCAAGGGAAGTTTCCGGTGCCTCTGCGAGGACCCCTACGAGTTAGGAGATGATGGGAGGACCTGCATAGGTGAGGCTGCTCCCCT---CTCTCTCTCTGTC----CGTCCACTTGTGAGTTTTTGTAAAATGAAGAAAGGTGTGT-TCAAGTGAGGCAACTGTCAATCATCATCTTGATTGGGAAGG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 184921 249 + 287728 GCAGATGTGAACGAGTGTGCAAACAGTG-CCCAGCCCCCCTGCCACGCCTCCGCGAGATGCAGGAACACCAAGGGAAGCTTCCGGTGCCTCTGCGAGGACCCCTACGAGTTAGGAGACGACGGGAGGACCTGCATAGGTGAGACTGCTCCCCTCCCCTCTTTCTCTGTC----CGTCCATTTGCGAGTTTTTGTAAAATGAAGAAAAGTGTGT-TCAAGTGAGGCAACTGTCAATCATCATCTTGACTGGGAAGG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 965590 235 + 5252280 GCAGATGTGAACGAGTGTGCAACCCTGG-CTCAGCCCCCCTGCCACCCCTCCGCACACTGCAGGAACACCAAGGGCGGCTTCCAGTGCGTCTGTTCCGACCCCCTCGTGCTGGCAGATGACAGCAGGACCTGCGTAGGTGAG-------CC-----CCTCCTCTCTG------TGTCCACTCAAGAGTTTCCGTAAAAC-AAAAACAGTGTGTGCCAGGGTCATCACCCACAAATTTCCATCCCACCTGGGAAGG i otoGar3.GL873658 C 0 I 540 s dasNov3.JH576208 1797309 229 + 4416731 GCAGATATTAATGAATGCAAAGATCTAA-TGGACCCTCCCTGCCATGCCTCTGCCAAATGCAAGAACACCAAGGGAAGCTTCCAGTGTGTCTGTGTGGACCCTTATGTATTAGGAGAAGATCAAAGAACCTGTGTAGGTGAGA------TC-----ATAGCTCCCTTTT----GTACCAGATGGTAATTTTTATTTTA--------AATGTGT-TCAGTGTAGTCAACTAT-ATGTAACATCAAGTCTAGGAGGG i dasNov3.JH576208 I 1335 C 0 a score=188784.000000 s hg38.chr2_KI270774v1_alt 186558 19 + 223625 --GCGGAGATGAATAAGACAC s panTro5.chr2A 1483376 19 + 111504155 --GCGGAGATGAATAAGACAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1422161 19 + 114371477 --GCGGAGATGAATAAGACAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1446556 18 + 1464242 --GC-GAGATGAATAAGACAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1174063 19 + 81552678 --GCAGAGATGAATAAGACAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 2255 19 - 11509 --GCAGAGATGAATAAGACAC i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1471737 19 - 111193037 --GCAGAGATGAATAAGACAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1500093 19 + 3644372 --GCAGAGATGAATAAGACAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1453930 19 - 10304083 --GCAGAGATGAATAAGACAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1533899 19 - 107702431 --GCAGAGATGAATAAGACAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1026746 19 - 2200435 --GCAGAGATGAATAAGACAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1452956 18 - 13651311 --GCAGAGATGAATAAGACA- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1443776 19 - 108792865 --GCGGAGATGAATAAGACAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1272741 19 - 7082604 --GCTGAGATGAATAAGACAC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1366030 19 + 1864846 --ACGGGGATGAATAAGACAC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 185170 19 + 287728 --GCGGAGATGAATAAGACAC i aotNan1.NW_018513311v1 C 0 I 38 s dasNov3.JH576208 1797538 21 + 4416731 ACGGGGTGTAGAGGAAGAGAT i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 965825 540 + 5252280 I a score=56351.000000 s hg38.chr2_KI270774v1_alt 186577 7 + 223625 CAAGCCC- s panTro5.chr2A 1483395 7 + 111504155 CAAGCCT- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1422180 7 + 114371477 CAAGCCT- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1446574 7 + 1464242 CAAGCCC- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1174082 7 + 81552678 CAAGCCC- i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 2274 7 - 11509 CAAGCCC- i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1471756 7 - 111193037 CAAGCCC- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1500112 7 + 3644372 CAAGCCC- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1453949 7 - 10304083 CAAGCCC- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1533918 7 - 107702431 CAAGCCC- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1026765 7 - 2200435 CAAGCCC- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1452974 7 - 13651311 CAAGCCC- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1443795 7 - 108792865 CAAGCCC- i calJac3.chr14 C 0 I 1 s saiBol1.JH378218 1272760 7 - 7082604 TGAGCCC- i saiBol1.JH378218 C 0 I 1 s cebCap1.NW_016107827v1 1366049 7 + 1864846 CGAGCCC- i cebCap1.NW_016107827v1 C 0 I 79 s dasNov3.JH576208 1797559 7 + 4416731 -AGGGCAT i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 185189 38 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I a score=45506.000000 s hg38.chr2_KI270774v1_alt 186584 13 + 223625 -ACG--------------------------------------------------------------GTGCCCGAGG s panTro5.chr2A 1483402 13 + 111504155 -ACA--------------------------------------------------------------GTGCCCGAGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1422187 13 + 114371477 -ACG--------------------------------------------------------------GTGCCCGAGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1446581 13 + 1464242 -ACG--------------------------------------------------------------GTGCCCGAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1174089 13 + 81552678 -ACG--------------------------------------------------------------GTGCCCGAGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 2281 12 - 11509 -A-G--------------------------------------------------------------GTGCCCGAGG i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1471763 12 - 111193037 -A-G--------------------------------------------------------------GTGCCCGAGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1500119 12 + 3644372 -A-G--------------------------------------------------------------GTGCCCGAGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1453956 12 - 10304083 -A-G--------------------------------------------------------------GTGCCCGAGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1533925 74 - 107702431 -A-GGTGCCCGGCGTCTGTGCTGTGCCTGAGGGGCACCTGCCCTGTGCCCAAGGGGTGTCCGCGCTGTGCCCGAGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1026772 12 - 2200435 -A-G--------------------------------------------------------------GTGCCCGAGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1452981 12 - 13651311 -A-G--------------------------------------------------------------GTGCCCAAGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1443803 12 - 108792865 -A-G--------------------------------------------------------------GTGCTAGAGG i calJac3.chr14 I 1 I 6 s saiBol1.JH378218 1272768 12 - 7082604 -A-G--------------------------------------------------------------GTGCTGGAGG i saiBol1.JH378218 I 1 I 15 s dasNov3.JH576208 1797566 13 + 4416731 AA-G--------------------------------------------------------------ATATCCCAAA i dasNov3.JH576208 C 0 I 5 e aotNan1.NW_018513311v1 185189 38 + 287728 I e cebCap1.NW_016107827v1 1366056 79 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I a score=27891.000000 s hg38.chr2_KI270774v1_alt 186597 5 + 223625 -GGCGT------ s panTro5.chr2A 1483415 5 + 111504155 -GGCGT------ i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1422200 5 + 114371477 -GGCGT------ i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1446594 5 + 1464242 -GGCGT------ i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1174102 5 + 81552678 -GGCGT------ i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 2293 5 - 11509 -GGCGT------ i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1471775 5 - 111193037 -GGCGT------ i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1500131 5 + 3644372 -GGCGT------ i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1453968 5 - 10304083 -GGCGT------ i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1533999 5 - 107702431 -GGCAT------ i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1026784 5 - 2200435 -GGCGT------ i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1452993 5 - 13651311 -GGCGT------ i colAng1.NW_012118821v1 C 0 I 198 s calJac3.chr14 1443821 5 - 108792865 -TGCGT------ i calJac3.chr14 I 6 I 2 s dasNov3.JH576208 1797584 12 + 4416731 GGCCATAATTAT i dasNov3.JH576208 I 5 C 0 e aotNan1.NW_018513311v1 185189 38 + 287728 I e saiBol1.JH378218 1272780 15 - 7082604 I e cebCap1.NW_016107827v1 1366056 79 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I a score=43708.000000 s hg38.chr2_KI270774v1_alt 186602 7 + 223625 CTGCGCT s panTro5.chr2A 1483420 7 + 111504155 CTGCGCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1422205 7 + 114371477 CTGCGCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1446599 7 + 1464242 CTGCGCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1174107 7 + 81552678 CTGCACT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 2298 7 - 11509 CCGCTCT i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1471780 7 - 111193037 CCGCGCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1500136 7 + 3644372 CCGCGCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1453973 7 - 10304083 CCGCGCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1534004 7 - 107702431 CTGCACT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1026789 7 - 2200435 CCGCGCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1453196 7 - 13651311 CTGCGCT i colAng1.NW_012118821v1 I 198 C 0 s calJac3.chr14 1443828 7 - 108792865 CTGCACT i calJac3.chr14 I 2 C 0 s dasNov3.JH576208 1797596 7 + 4416731 CTTTGTT i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 185189 38 + 287728 I e saiBol1.JH378218 1272780 15 - 7082604 I e cebCap1.NW_016107827v1 1366056 79 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I a score=3081984.000000 s hg38.chr2_KI270774v1_alt 186609 560 + 223625 ---GTGCTGGGGGCAGAGGATGCACTT---CGTGTGCCTGCTGTC--TGCA---GAGACCCTCGAAGCACACTGAGGCTG----------GGGACGGCAGCCAGA-----ATGCATTGCCAGACAAGGCCCAC--AGGTGTATACCC-AGCCTAGATCACACCCCAGA-CAAAAAAC--CTATGAAACAGGCAGGATTCATTACAGACCCATCCATCACCTCTCCTCCTCCTGGGACCCCT--CCAAATGCACCCGACTGCACCCT---GACCAGGGCCAGCAGCACAGCT------GCCTGCCTGT--------TCTCCCA-----------CCTCCACCTCCGGATG--------TCCCCGCCCGGCATGGGGCCTG--------GGTGCTCAACATCTGCCTCGGATGGCCTTGTCCAGTCCCCCAGCTCTGCACTCAGCTCAGGGACA-GCGTCTTCCT----CACCGCTGCCTCCAAGCCAG--------GTGCCAGCTACGC-------------CCAAACTTttgacgaatttactcccctga--aaattgtggctcttaggtaagcactatctttaatcttcattttatagaaga-ggatactagtgataagagagggcgagagacgctcctggtcacacagccactccgtagctggcc s panTro5.chr2A 1483427 562 + 111504155 ---GTGCTGGGGGCAGAGGATGCATTT---CGTGTGCCTGCTGTCTGTGCA---GAGACCCTCGAAGCACGCTGAGGCTG----------GGGACGGCAGCCAGA-----ATGCATTTCCAGACAAGGCCCAC--AGGTGTATACCC-AGCCTAGATCACACCCCAGA-CAAAAAAC--CTATGAAACAGGCAGGATTCATTACAGACCCATCCATCACCTCTCCTCCTCCTGGGCCCCCT--CCAAACGCACCCGACTGCACCCT---GACCAGGGCCAGCAGCACAGCT------GCCTGCCTGT--------TCTCCCA-----------CCTCCACCTCCGGATG--------TCCCCGCCCGGCATGGGGCCTG--------GGTGCTCAACATCTGCCTCGGATGGCCTTGCCCAGTCCCCCAGCTCTGCACTCAGCTCAGGGACA-GCGTCTTCCT----CACCGCTGCCTCCAAACCAG--------GTGCCAGCTACGC-------------CCAAACTTttgacgaatttactcccctga--aaattgtggctcttaagtaagcactatctttaatcttcattttatagaaga-ggatactagtgataagagagggccagagatgctcctggtcacatagccactccgtagctggcc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1422212 562 + 114371477 ---GTGCTGGGGGCAGAGGATGCATTT---CGTGTGCCTGCTGTCTGTGCA---GAGACCCTCGAAGCACGCTGAGGCTG----------GGGACGGCAGCCAGA-----ATGCATTTCCAGACAAGGCCCAC--AGGTGTATACCC-AGCCTAGATCACACCCCAGA-CAAAAAAC--CTATGAAACAGGCAGGATTCATTACAGACCCATCCATCACCTCTCCTCCTCCTGGGCCCCCT--CCAAACGCACCCGACTGCACCCT---GACCAGGGCCAGCAGCACAGCT------GCCTGCCTGT--------TCTCCCA-----------CCTCCACCTCCGGATG--------TCCCCGCCCGGCATGGGGCCTG--------GGTGCTCAACATCTGCCTCGGATGGCCTTGCCCAGTCCCCCAGCTCTGCACTCAGCTCAGGGACA-GCGTCTTCCT----CACCGCTGCCTCCAAACCAG--------GTGCCAGCTACGC-------------CCAAACTTttgacgaatttactcccctga--aaattgtggctcttaagtaagcactatctttaatcttcattttatagaaga-ggatactagtgataagagagggccagagatgctcctggtcacatagccactccgtagctggcc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1446606 561 + 1464242 ---GTGCTGGGGGCAGAGGATGCACTT---CGTGTGCCTGCTGTCTGTGCA---GAGACCCTTGAAGCACGCTGAGGCTG----------GGGACGGCCGCCAGA-----ATGCATTGCCAGACAAGGCCCAC--AGGTGTATACCC-AGCCTAGATCACACCCCAGA-CAAAAGAC--CTATGAAACAGGCAGGATTCATTACAGACCCATCCATCACCTCTCCTCCTCCTGGGCCCCCT--CCAAACGCA-CCGACTGCACCCT---GACCAGGGCCAGCAGCACAGCT------GCCTGCCTGT--------TCTCCCA-----------CCTCCACCTCCGGATG--------TCCCCGCCCGGCATGGGGCCTG--------GGTGTTCAACATCTGCCTCAGATGGCCTTGCCCAGTCCCCCAGCTCTGCATTCAGCTCAAGGACA-GCATCTTCCT----CACCACTGCCTCCAAGCCAG--------GTGCCAGCTACGC-------------CCAAACTTTTGATGAATTTACTCCCCTGA--AAATTGTGGctcttaagtaagcactatctttaatcttcattttatagaaga-ggatactagtgataagagagggcgagagacgctcctggtcacacagccactctctagctggcc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1174114 537 + 81552678 ---GTGCTGCGGGCGGAGGATGCACTT---CGTGTGCCTGCTGTCTGTGCA---GAGACCCTCAGTGCATGCTGAGGCTG----------GGGGCGGCAGCCAGA-----ATGCATTTCCAGACAAGGCCCAC--ACGTGTATACCC-AGCCTAGATCACACCCCAGA-CAAGAAAC--CTATGAAACAGGCAGAATCCATTACAGACCCATCCATCACCTCTCCTCCTTCTGGGCCCACTCCCCAAACGCACCCGACTGCACCCT---GACCAGGGCCAGCAGCACAGCG------GCCTGCCTG---------TCTCCCA-----------CCTCCACCTCCAGATG--------TCCCCACCTGGCATG-----------------------------------GATGGCCATGCCCCGTCCCCCAGCTCTGCACTCAGCTCAGGGACA-GCGTCTTCCT----CACCGCTGCCTCCAAGCCAG--------GTGCCAGCTACAC-------------CCAAACTTTTGACCAATTTCCTCCCCTGA--AAATTGTGGctcttaagtaagcactatctttaatcttcattttatagaagagggatactagtgataagagagggcgagacacgctcctggtcacgcagccactccatagctggcc i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 2305 555 - 11509 ---GTGCTGGGGGCAGAGGATGCATTT---CATAT--CTGCTGTCTGTGCA---GAGACCCTCGGTGCACGCTGAGGCTG----------GGGGCGGCAGCCAGA-----ACCCATTTCCAGACAAGGTCCAC--AGGTGAATACCC-AACCTAGATCACCCCCAAGA-CACAAAAC--TTATGAAACAGGCAGCGTTCAATACAGACCCATCCATCACCTCTCCTCCTCCTGGGCCCCCT--CCAAACGCACCCGACTGCACCCT---GACCAGGGCCAGCAGCACAGCT------GCCTGCCTG---------TCGCCCA-----------CCCCCACCTCTGGATG--------TCCCCGCCCTGCATGGGGCCTG--------GGTGCTCAACATCCACCTCGGATGGCCTTGCCCAGTCCCCCAGCTCTGCCCTCAGATCAGGGACA-GCGTCTTCCT----CACCGCTGCCTCCAAGTCAG--------GCACCAGATACGC-------------CCAAACTTTGGACGAATTTACTCCCCTGA--AAATTGTGGctcttaagtaagcattatctttaatcttcattttatacaaaa-ggacactagtgataagaggg----cgagatgctgccactcacacagccactctgtagctggcc i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1471787 555 - 111193037 ---GTGCTGGGGGCAGAGGATGCATTT---CATAT--CTGCTGTCTGTGCA---GAGACCCTCGGTGCACGCTGAGGCTG----------GGGGCGGCAGCCAGA-----ACCCATTTCCAGACAAGGTCCAC--AGGTGCATACCC-AACCTAGATCACCCCCAAGA-CACAAAAC--TTATGAAACAGGCAGCGTTCAATACAGACCCATCCATCACCTCTCCTCCTCCTGGGCCCCCT--CCAAACGCACCCGACTGCACCCT---GACCAGGGCCAGCAGCACAGCT------GCCTGCCTG---------TCGCCCA-----------CCCCCACCTCTGGATG--------TCCCCGCCCTGCATGGGGCCTG--------GGTGCTCAACATCCACCTCGGATGGCCTTGCCCAGTCCCCCAGCTCTGCCCTCAGATCAGGGACA-GCGTCTTCCT----CACCGCTGCCTCCAAGTCAG--------GCGCCAGATACGC-------------CCAAACTTTGGACGAATTTACTCCCCTGA--AAATTGTGGctcttaagtaagcattatctttaatcttcattttatacaaaa-ggacactagtgataagaggg----cgagatgctgccactcacacagccactctgtagctggcc i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1500143 555 + 3644372 ---GTGCTGGGGGCAGAGGATGCATTT---CATAT--CTGCTGTCTGTGCA---GAGACCCTCGGTGCACGCTGAGGCTG----------GGGGCGGCAGCCAGA-----ACCCATTTCCAGACAAGGTCCAC--AGGTGCATACCC-AACCTAGATCACCCCCAAGA-CACAAAAC--TTATGAAACAGGCAGCGTTCAATACAGACCCATCCATCACCTCTCCTCCTCCTGGGCCCCCT--CCAAACGCACCCGACTGCACCCT---GACCAGGGCCAGCAGCACAGCT------GCCTGCCTG---------TCGCCCA-----------CCCCCACCTCTGGATG--------TCCCCGCCCTGCATGGGGCCTG--------GGTGCTCAACATCCACCTCGGATGGCCTTGCCCAGTCCCCCAGCTCTGCCCTCAGATCAGGGACA-GCGTCTTCCT----CACCGCTGCCTCCAAGTCAG--------GCGCCAGATACGC-------------CCAAACTTTGGACGAATTTACTCCCCTGA--AAATTGTGGctcttaagtaagcattatctttaatcttcattttatacaaaa-ggacactagtgataagaggg----cgagatgctgccactcacacagccactctgtagctggcc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1453980 554 - 10304083 ---GTGCTGGGGGCAGAGGATGCATTT---CATAT--CTGCTGTCTGTGCG---GAGACCCTCGGTGCATGCTGAGGCTG----------GGGGCGGCAGTCAGA-----ACGCATTTCCAGACAAGGTCCAC--AGGTGCATACCC-AACCTAGATCA-CCCCAAGA-CACAAAAC--TTATGAAACAGGCAGCGTTCAATACAGACCCATCCATCACCTCTCCTCCTCCTGGGCCCCCT--CCAAACGCACCCGACTGCACCCT---GACCAGGGCCAGCAGCACAGCT------GCCTGCCTG---------TCGCCCA-----------CCCCCACCTCTGGATG--------TCCCCGCCCTGCATGGGGCCTG--------GGTGCTCAACATCCACCTCGGATGGCCTTGCCCAGTGCCCCAGCTCTGCCCTCAGATCAGGGACA-GCGTCTTCCT----CACCGCTGCCTCCAAGTCAG--------GCGCCAGATACGC-------------CCAAACTTttgacgaatttactcccctga--aaattgtggctcttaagtaagcattatctttaatcttcattttatacaaaa-ggacactagtgataagaggg----cgagatgctgccactcacacagccactccgtagctggcc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1534011 554 - 107702431 ---GTGCTGGGGGCAGAGGATGCATTT---CACGT--CTGCTGTCTGTGCA---GAGA-CCTCAGTGCATGCTGAGGCTG----------GGGGCAGCAGCCAGA-----ACGCGTTTCCAGACAAGGTCCAC--AGGTGCACACCC-AACCTAGATCACCCCCAAGA-CACAAAAC--TTATGAAACAGGCAGCGTTCAATACAGACCCATCCATCACCTCTCCTCCTCCTGGTCCCCCT--CCAAACGCACCCGACTGCACCCT---GACCAGGGCCAGCAGCACAGCT------GCCTGCCTG---------TCACCCA-----------CCCCCACCTCTGGATG--------TCCCTGCCCTGCATGGGGCCTA--------GGTGCTCAACATCCACCTCAGATGGCCTTGCCCAGTCCCCCAGCTCTGCCCTCAGATCAGGGACA-GCGTCTTCCT----CACCACTGCCTCCAAGTCAG--------GTGCCAGATACGC-------------CCAAACTTTTGACAAATTTACTCCCCTGA--AAATTGTGGctcttaagtaagcattatctttaatcttcattttatacaaaa-ggacactagtgataagaggg----cgagatgctcccgctcacacagccactccgtagctggcc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1026796 555 - 2200435 ---GTGCTGGGGGCAGAGGATGTATTT---CATAT--CTGCTGTTTGTGCA---GAGATCCTCGGTGCATGCTGAGGCTG----------GGGGCGGCAGCCAGA-----ACGCATTTCCAGACAAGGTCCAC--AGGTGCATACCC-AACCTAGATCACCCCCAAGA-CACAAAAC--TTATGAAACAGGCAGTGTTCAATACAGACCCATCCATCACCTCTCCTCCTCCTAGGCCCCCT--CCAAATGCACCCGACTGCACCCT---GACCAGGGCCAGCAGCACAGCT------GCCTGCCTG---------TCGCCCA-----------CCCCCACCTCTGGATG--------TCCCCGCCCTGCATGGGGCCTG--------GGTGCTCAACATCCACCTTGGATGGCCTTGCCCAGTCCCCCAGCTCTGCCCTCAGATCAGGGACA-GCGTCTTCCT----CACCGCTGCCTCCAAGTCAG--------GCGCCAGATACGC-------------CCAAACTTTGGAAGAATTTACTCCCCTGA--AAATTGTGGctcttaagtaagcattatctttaatcttcattttatacaaaa-ggacactagtgataagaggg----cgagatgctgccactcacacagccactccgtagctggcc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1453203 555 - 13651311 ---GTGCTGGGGGCAGAGGATGCATTT---CATGT--CTGCTGTCTGTGCA---GAGACCCTCAGTGCATGCTGAGGCTG----------GGGGCGGCAGCCAGA-----ACGCATTTCCAGACAAGGTCCAC--AGGTGCATACCC-AGCCTATATCACCCCCAAGA-CACAAAAC--TTATGAAACAGGCAGCGTTCAATACAGACCCATCCATCACCTCTCCTCCTCCTGGGCCCCCT--TCAAACGCACCCCACTGCACCCT---GACCAGGGCCAGCAGCACAGCT------GCCTGCCTG---------TTGCCCA-----------CCCCCACCTCTGGATG--------TCCCCGCCCTGCATGGGGCCTG--------GGTGCTCAACATCCACCTCGGATGGCCTTGCCCAGTCCCCCAGCTCTGCCCTCAGATCAGGGACA-GCGTCTTCCT----CACTGCTGCCTCCAAGTCAG--------GTGCCAGATACGC-------------CCAAACTTttgacgaatttactcccctga--aaattgtggctcttaagtaagcattatctttaatcttcattttatacaaaa-ggacactagtgataagaggg----cgagacgctgccgctcacacagccactccgtagctggcc i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1797603 650 + 4416731 GTTTCATTGTGGGTAGATGATGTACTTATGATTAT--CTGCCGTGTTAACATTGAGGATCATAAGCATCCTATAATGCTGAGTGGTTAGTGGGAAACCAACTGGAAGAACACTTTTTTCCAGATAAAGTCCACCTAAGTATATACCTAAGCCTATATTATAGGGAAAAGCACAACATTATTACACAATACTCGGCGTTCAAGAGAG-TTCAT-CATTATGGCTCTTTCTCGTGGATCTTCTTTTCAAACTTGGTCCTCTTTACCCTCTAAAACAGGCTTTGCGCGGTAGCCTCATGGACCTGCATGTCCAGCTACTCCTCCATGACCTCACTGTTCCCATACCTTGATGTTTGTCATTCCTCCCCTTGCATAGCCTCTGCAATAGTCAGCTCTCTACTTCTTCCCTGCATGGCTCTGTTCTGT------ATTCTGC------ATCAGGGTCACTCGTCAGCCTCAAGCACCATTACCatcaccacagtctattgagtgtcccctagccttggggcactgttctaaacatttgactaatttaattcccccatttaattattccaatcaggtaaacactatttttaatccccattttacctaagc-ggataccaggagacagaggttaaatgatttgtcagagatcacgtagctacttagttgcaggcc i dasNov3.JH576208 C 0 I 2955 e aotNan1.NW_018513311v1 185189 38 + 287728 I e saiBol1.JH378218 1272780 15 - 7082604 I e cebCap1.NW_016107827v1 1366056 79 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e calJac3.chr14 1443835 0 - 108792865 C a score=2165222.000000 s hg38.chr2_KI270774v1_alt 187169 409 + 223625 gggaatttgtgttaatagtctggcttccagCTCTTATAGAAAAATAATTATTTACCAGACTCAAGTTACAGACAGACTTCCTTTGAGCTACTGTCATAGGGGAGAGAGGTCTCCAGAAAGAACCAAGTGCAAGGCTCAAATGCAGCAAAGGTAGCTGGGACGTCCAGCCAGGGCGGAGAGGGGTCAGTGCAAAACGCTTCATGACTCAACTGCATTGAggagcttctgctaaactggaataataggattcttgctgaaactcagctcctc-agcgaagggcacaagggccagggtcaaggccagttATCAAGCAAGTGAGTCTGAAAAGAGATGGCCAGGACGCGGCTGCCCGGGGCCTTCAGAGGCTGGGGAGGCTCTTTCTGGGGCTCTCAAGCTACATCCGCTTGAC s panTro5.chr2A 1483989 409 + 111504155 gggaatttgtgttaatagtctggcttccagCTCTTATAGAAAAATAATTATTTACCGGACTCAAGTTACAGACAGACTTCCTTTGAGCCACTGTCATAGGGGAGTGAGGTCTCTGGAAAGAACCAAGTGCAAGGCTcaaatgcagcaaaggcagctgggacgtccagccagggcggagaggggtcagtgcaaaacgcttcatgactcaactgcattaaggagcttctgctaaactggaataataggattcttgctgaaactcagctcctc-ggcgaaggacacaagggccagggtcaaggccagttATCAAGCAAGTGAGTCTGAAAAGAGATGGCCAGGACGCGGCTGCCTGGGGCCTTCAGAGGCTGGGGAGGCTCTTTCTGGTGCTCTCAAGCTACATCCGCTTGAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1422774 409 + 114371477 gggaatttgtgttaatagtctggcttccagCTCTTATAGAAAAATAATTATTTACCGGACTCAAGTTACAGACAGACTTCCTTTGAGCCACTGTCATAGGGGAGTGAGGTCTCCGGAAAGAACCAAGTGCAAGGCTcaaatgcagcaaaggcagctgggacgtccagccagggcggagaggggtcagtgcaaaacgcttcatgactcaactgcattaaggagcttctgctaaactggaataataggattcttgctgaaactcagctcctc-ggcgaaggacacaagggccagggtcaaggccagttATCAAGCAAGTGAGTCTGAAAAGAGATGGCCAGGACGCGGCTGCCCGGGGCCTTCAGAGGCTGGGGAGGCTCTTTCTGGTGCTCTCAAGCTACATCCGCTTGAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1447167 408 + 1464242 gggaatttgtgttaatagtctggcttccagCTTTTATAGAAAAATAATTATTTACCAGACTGAAGTTACAGACAGACTTCCTTTGAGCTACTGTCATAGGGGAGTGAGGTCTCCGGAAAGAACCAAGTGCAAGGCCCAAATGCAGCAAAGGCAGCTGGGACGTCCAGCCAGGGCGGAGAGGGGTCAGTGCAAAACGCTTCATGACTCAACTGCATTAAGGGGCTt-tgctaaactggaataataggattcttgctgaaactcagctcctc-ggcgaaggacacaatggccaaggtcaaggccagttATCAAGCAAGTGAGTCTGAAAAGAGATGGCCAGGACGCGGCTGCCCGGGGCCTTCAGAGGCCGGGGATGCTCTTTCTGGTGCTCTCAAGCTACATCTGCCTGAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1174651 391 + 81552678 gggaatttgtgttaatagtttggcttccagTTCTTA----------------TACTAGACTCGAGTTACAGACAGACTTCCTCTGAGCTACTGTCACAGGGGAGTGAGGTCTCCCGAAAGAACCAAGTGCAAGACCCAAACGCAGCAAAGGCAGCTGGGACGTCCAGCCAGGGCGGAG-GGGGTCAGTGCAAAACGCTTCATAACTCAACTTCATGAAgggggttctgctaaactggaatgataggatttttgctgagactcagctcctt-ggtgaaggacacaagggccaaggtcaaggccAGTCATCAAGCCAGTGACTCTGAAAAGAGATGGCCAGGATGCGGCTGCCCGGGGCCTTCAGAGGCCAGGGATGCTCTTTCTGGTGCTCTCAA-CTACATCCACCTGAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 2860 409 - 11509 gggaATTTGTGTTAATAGT-TGACTTCCAACTCTTATAGAAAAATAATTATTTGCCAGACTCGCGTTACAGACAGAATTCCTTTGAGCTACTGTCATAGGGGAGTGAGGTCTCCAGAAAGAACCAAGTGCAAGGCCCAAATGCAGCAAAGGCAGCTGGGACGTCCAGCCAGGACAGAAAGACGTCAGTGCAAAACGCTTCATGACTCAACTTCATTAAggggattctgataagctggaataataagattcttgctgaaactcagctcctcaggcgaaggacacaagggccaaggttaaggccagtcaaaaagcgagtgagtctgaaaaaagATGGCCAGAACGCAGCTGCGTGGGGCCTTCAGAGGCCGAGGATGCTCCTTCTGGTGCTCTGAAGCTACATCCGCCTGAC i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1472342 409 - 111193037 gggaATTTGTGTTAATAGT-TGACTTCCAACTCTTATAGAAAGATAATTATTCGCCAGACTCGCATTACAGACAGAATTCCTTTGAGCTACTGTCATAGGGGAGTGAGGTCTCCAGAAAGAACCAAGTGCAAGGCCCAAATGCAGCAAAGGCAGCTGGGACGTCCAGCCAGGACAGAAAGACGTCAGTGCAAAACGCTTCATGACTCAACTTCATTAAggggattctgataagctggaataataggattcttgctgaaactcagctcctcaggcgaaggacacaagggccaaggttaaggccagtcaagaagcgagtgagtctgaaaaaagATGGCCAGAACGCAGCTGCGTGGGGCCTTCAGAGGCCGAGGATGCTCCTTCTGGTGCTCTGAAGCTACATCCGCCTGAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1500698 409 + 3644372 gggaATTTGTGTTAATAGT-TGACTTCCAACTCTTATAGAAAAATAATTATTCGCCAGACTCATGTTACAGACAGAATTCCTTTGAGCTACTGTCATAGGGGAGTGAGGTCTCCAGAAAGAACCAAGTGCAAGGCCCAAATGCAGCAAAGGCAGCTGGGACGTCCAGCCAGGACAGAAAGACGTCAGTGCAAAACGCTTCATGACTCAACTTCATTAAggggattctgataacctggaataataggattcttgctgaaactcagctcctcaggcgaaggacacaagggccaaggttaaggccagtcaagaagcgagtgagtctgaaaaaagATGGCCAGAACGCAGCTGCGTGGGGCCTTCAGAGGCCGAGGATGCTCCTTCTGGTGCTCTGAAGCTACATCCGCCTGAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1454534 409 - 10304083 gggaatcTGTGTTAATAGT-TGACTTCCAACTCTTATAGAAAAATAATTATTCGCCAGACTCGAGTTACAGACAGAATTCCTTTGAGCTACTGTCATAGGGGAGTGAGGTCTCCAGAAAGAACCAAGTGCAAGGCCCAAATGCAGCAAAGGCAGCTGGGACGTCCAGCCAGGAGAGAGAGGCGTCAGTGCAAAACGCTTCATGACTCAACTTCATTAAggggattctgataagctggaataataggattcttgctgaaactcagctcctcaggtgaaggacacaagggccaaggttaaggccagtcaagaagcgagtgagtctgaaaaaagATGGCCAGAACGCAGCTGCGTGGGGCCTTCAGAGGCCGAGGATGCTCCTTCTGGTGCTCTGAAGCTACGTCCGCCTGAC i cerAty1.NW_012000820v1 C 0 I 1267 s chlSab2.chr14 1534565 407 - 107702431 gggaATTTGTGTTAATAGT-TGACTTCCAACTCTTATAGAAAAATAATTATTCACCAGACTCGAGTTACAGACAGAATTCCTTTGAGCTACTGTCATAGGGGAGTGAGGTCTCCAGAAAGAACCAAGTGCAATGTCCAAATGCAGCAAAGGCAGCTGGGACGTCCAGCCAGGACAGAGAGGCGTCAGTGCAAAACGCTTCATGACTCAACTTCATTAAggggattctgagaagctggaataataggattcttgctgaaactcagctcctcaggtgaaggacacaagggccaaggtcaaggacagtcaagaagTGAGTGAGTCTGAAAAAAGATGGCCAGAACGCGGCTGCGTGGGGCCTTCAGAGGCCGGGGATGCTCTTTCTGGTGCTCTGAAACTACAT--GCCTGAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1027351 409 - 2200435 gggaATTTGTGTTAATAGT-TGACTTCCAACTCTTATAGAAAAATAATTATTCGCCAGACTCGAGTTACAGACAGAATTCCTTTGAGCTACTGTCATAGGGGAGTGAGGTCTCCAGAAAGAACCAAGTGCAAGGCCCAAATGCAGCAAAGGCAGCTGGGACGTCCAGCCAGGACAGAAAGACGTCAGTGCAAAACGCTTCATGACTCAACTTCATTAAggggattctgataagctggaataataggattcttgctgaaactcagctcctcaggcgaaggacacaagggccaaggttaaggccagtcaagaagcgagtgagtctgaaaaaagATGGCCAGAACGCAGCTGCGTGGGGCCTTCAGAGGCCGAGGATGCTCCTTCTGGTGCTCTGAAGCTACATCCGCCTGAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1453758 373 - 13651311 gggaATTTGTGTTAATAGT-TGACTTCCAACTCTTATAGAAAAATAATTATTCACCAGACTCGAGTTACAGACAGAATTCCTTTGAGCTACTGTCATAGGGGAG------------------------------------TGCAGCAAAGGCAGTTGGGACGTCCAGTCAGGATGGAGAGGGGTCAGTGCAAAACGCTTCATGACTCAGCTTCATTAAggggattctgataagctggaataattggattcttgctgaaactcagctcctcaggcgaaggatacaagggccaaggtcaaggccagtcaagaagtgagtgagtctgaAAAACGATGGCCAGAATGCGGCTGCGTGGGGCCTTCAGAGGCCGGGGATGCTCTTTCTGGTGCTCTGAAGCTACATCCGCCTGAC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 185189 38 + 287728 I e saiBol1.JH378218 1272780 15 - 7082604 I e cebCap1.NW_016107827v1 1366056 79 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443835 0 - 108792865 C a score=38555.000000 s hg38.chr2_KI270774v1_alt 187578 14 + 223625 TGGCA-----------CGTCCCCCA s panTro5.chr2A 1484398 14 + 111504155 TGGCA-----------CGTCCCCCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1423183 14 + 114371477 TGGCA-----------CGTCCCCCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1447575 14 + 1464242 TGGCA-----------CGTCCCCCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175042 14 + 81552678 TGGCA-----------CGTCCGCCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 3269 14 - 11509 AGGCA-----------TGTCCTCCC i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1472751 25 - 111193037 AGGTGCTCTGAAGCTACATCCTCCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1501107 14 + 3644372 AGGCG-----------TGTCCTCCC i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1534972 14 - 107702431 AGGCG-----------TGTCCTCCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1027760 14 - 2200435 AGGCG-----------TGTCCTCCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1454131 14 - 13651311 AGGCG-----------TATCCTCCC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 185189 38 + 287728 I e saiBol1.JH378218 1272780 15 - 7082604 I e cebCap1.NW_016107827v1 1366056 79 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443835 0 - 108792865 C e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I a score=83794.000000 s hg38.chr2_KI270774v1_alt 187592 20 + 223625 CTCCTGTGTCAGG--CATACAC s panTro5.chr2A 1484412 20 + 111504155 CTTCTGTGTCAGA--CATACAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1423197 20 + 114371477 CTTCTGTGTCAGA--CATACAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1447589 20 + 1464242 CTCCTGTGTCAGG--CATACAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175056 19 + 81552678 C-CCTGTGTCAGG--CACACAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 3283 20 - 11509 TTCCTGTGTCAGG--CACACCC i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1472776 20 - 111193037 TTCCTGTGTCAAG--CACACCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1501121 20 + 3644372 TTCCTGTGTCAGA--CACACCC i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1534986 20 - 107702431 TTCCTGTGTCAGG--CACACCC i chlSab2.chr14 C 0 I 2 s manLeu1.NW_012103754v1 1027774 20 - 2200435 TTCCTGTGTCAAG--CACACCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1454145 22 - 13651311 ATCCTGTGTCAGGCACACACCC i colAng1.NW_012118821v1 C 0 C 0 s cebCap1.NW_016107827v1 1366135 18 + 1864846 CTCCTGTGTCAGG--CACAC-- i cebCap1.NW_016107827v1 I 79 C 0 e aotNan1.NW_018513311v1 185189 38 + 287728 I e saiBol1.JH378218 1272780 15 - 7082604 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443835 0 - 108792865 C e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I a score=15600.000000 s hg38.chr2_KI270774v1_alt 187612 2 + 223625 CC s panTro5.chr2A 1484432 2 + 111504155 CC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1423217 2 + 114371477 CC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1447609 2 + 1464242 CC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175075 2 + 81552678 CC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 3303 2 - 11509 CC i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1472796 2 - 111193037 CC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1501141 2 + 3644372 CC i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1535008 2 - 107702431 CC i chlSab2.chr14 I 2 C 0 s manLeu1.NW_012103754v1 1027794 2 - 2200435 CC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1454167 2 - 13651311 CC i colAng1.NW_012118821v1 C 0 C 0 s cebCap1.NW_016107827v1 1366153 2 + 1864846 CC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 185227 2 + 287728 CC i aotNan1.NW_018513311v1 I 38 C 0 e saiBol1.JH378218 1272780 15 - 7082604 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443835 0 - 108792865 C e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I a score=28298.000000 s hg38.chr2_KI270774v1_alt 187614 16 + 223625 CCT--TCCTGTGTCAGGC s panTro5.chr2A 1484434 15 + 111504155 CA---TCCTGTGTCAGGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1423219 2 + 114371477 CA---------------- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1447611 15 + 1464242 CC---TCCTGTGTCAGGC i gorGor5.CYUI01015607v1 C 0 I 2 s nomLeu3.chr19 1175077 2 + 81552678 CT---------------- i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 3305 14 - 11509 CT----CCTGTGTCAGAC i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1472798 14 - 111193037 CT----CCTGTGTCAGAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1501143 14 + 3644372 CT----CCTGTGTCAGGC i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1535010 14 - 107702431 AT----CCTGTGTCAGGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1027796 14 - 2200435 TT----CCTGTGTCAGGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1454169 14 - 13651311 CT----CCTGTGTCAGGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1443835 16 - 108792865 --CCCTCCTGTGTCAGGC i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1366155 16 + 1864846 --CCTTCCTGTGTCAGGC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 185229 16 + 287728 --CCCTCCTGTGTCAGGT i aotNan1.NW_018513311v1 C 0 C 0 e saiBol1.JH378218 1272780 15 - 7082604 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I a score=184463.000000 s hg38.chr2_KI270774v1_alt 187630 26 + 223625 GCA-CCCCCTCCTGTGTCAGGCGCACC s panTro5.chr2A 1484449 26 + 111504155 GCA-CCCCCTCCTGTGTCAGGCACACC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1423221 18 + 114371477 ---------TCCTGTGTCAGGCACACC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1447628 26 + 1464242 ACA-CCCCCTCCTGTGTCAGGCGCACC i gorGor5.CYUI01015607v1 I 2 C 0 s nomLeu3.chr19 1175079 17 + 81552678 ----------CCTGTGTCAGGCACACC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 3319 27 - 11509 ACACCCCCCTCCTGTGTCAGACACACC i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1472812 27 - 111193037 ACATCCCCCTCCTGTGTCAGACACACC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1501157 27 + 3644372 ACATCCCCCTCCTGTGTCAGGCACATC i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1535024 26 - 107702431 ACA-CCCCCTCCTGTGTCAGGCACACC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1027810 27 - 2200435 ACACCCCCCTCCTGTGTCAAGCACACC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1454183 27 - 13651311 GCACCCCCCTCCTATGTCAGGCGCACC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1443851 26 - 108792865 ACA-CCCCCTCCTGTGTCAGGCACACC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1272795 26 - 7082604 GCA-CCTCCTCCTGTGTCAGGGACACC i saiBol1.JH378218 I 15 C 0 s cebCap1.NW_016107827v1 1366171 27 + 1864846 ATACCCCCCTCCTGTGTCAGGCACACC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 185245 26 + 287728 GCA-CCCCCTCCTGTGTCAGGTGCACC i aotNan1.NW_018513311v1 C 0 I 65 e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I a score=7397.000000 s hg38.chr2_KI270774v1_alt 187656 1 + 223625 C s panTro5.chr2A 1484475 1 + 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1423239 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1447654 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175096 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 3346 1 - 11509 C i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1472839 1 - 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1501184 1 + 3644372 C i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1535050 1 - 107702431 C i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1027837 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1454210 1 - 13651311 C i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1443877 1 - 108792865 C i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1272821 1 - 7082604 T i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1366198 1 + 1864846 C i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 185271 65 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I a score=7800.000000 s hg38.chr2_KI270774v1_alt 187657 1 + 223625 C s panTro5.chr2A 1484476 1 + 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1423240 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1447655 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175097 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 3347 1 - 11509 C i rheMac8.chrUn_NW_015079380v1 C 0 I 2 s macFas5.chr13 1472840 1 - 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1501185 1 + 3644372 C i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1535051 1 - 107702431 C i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1027838 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1443878 1 - 108792865 C i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1272822 1 - 7082604 C i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1366199 1 + 1864846 C i cebCap1.NW_016107827v1 C 0 I 2 e aotNan1.NW_018513311v1 185271 65 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e colAng1.NW_012118821v1 1454211 0 - 13651311 C e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I a score=-23006.000000 s hg38.chr2_KI270774v1_alt 187658 5 + 223625 ACTA-T---- s panTro5.chr2A 1484477 4 + 111504155 -CCA-C---- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1423241 4 + 114371477 -CCA-C---- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1447656 2 + 1464242 -C---T---- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175098 3 + 81552678 AC---T---- i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1472841 3 - 111193037 --CC-T---- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1501186 3 + 3644372 --CC-T---- i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1535052 4 - 107702431 --CCTT---- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1027839 3 - 2200435 --CC-T---- i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1443879 5 - 108792865 -----TCCCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1272823 1 - 7082604 -----C---- i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 185271 65 + 287728 I e cebCap1.NW_016107827v1 1366200 2 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e colAng1.NW_012118821v1 1454211 0 - 13651311 C e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e rheMac8.chrUn_NW_015079380v1 3348 2 - 11509 I a score=58243.000000 s hg38.chr2_KI270774v1_alt 187663 18 + 223625 CCTATATCAGGCACATCC s panTro5.chr2A 1484481 18 + 111504155 CTTGTGTCAGGCGCACCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1423245 18 + 114371477 CTTGTGTCAGGCGCACCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1447658 18 + 1464242 CCTGTGTCAGGCGCACCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175101 18 + 81552678 CCTGTGTCAGGCACACCC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1472844 18 - 111193037 CCTGTGTCAGACACACCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1501189 18 + 3644372 CCTGTGTCAGGCACACCC i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1535056 18 - 107702431 CCTGTGTCAGGCACACCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1027842 18 - 2200435 CCTGTGTCAGACACACCC i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1272824 16 - 7082604 CCTCTGTCAGGCGCAG-- i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 185271 65 + 287728 I e cebCap1.NW_016107827v1 1366200 2 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e rheMac8.chrUn_NW_015079380v1 3348 2 - 11509 I a score=44745.000000 s hg38.chr2_KI270774v1_alt 187681 24 + 223625 CACTCTCCTGAGTCAGGCACACCC s panTro5.chr2A 1484499 24 + 111504155 CACTATCCTATATCGGGCACATCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1423263 24 + 114371477 CACTATCCTATATCGGGCACATCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1447676 24 + 1464242 CACTATCCTATATCAGGTACATCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175119 22 + 81552678 CAC--TCCTGTGTCAGGCATAACC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1472862 22 - 111193037 --CCCTCCTGTGTCAGGCACATCC i macFas5.chr13 C 0 C 0 s chlSab2.chr14 1535074 24 - 107702431 TACCATCTTGTGTCAGGCACAGCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1027860 22 - 2200435 --CCCTCCTGTGTCAGGCACACCC i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1272840 21 - 7082604 -GCCCTCCT--GTCAGGCATACCC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 185271 65 + 287728 I e cebCap1.NW_016107827v1 1366200 2 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e rheMac8.chrUn_NW_015079380v1 3348 2 - 11509 I a score=52497.000000 s hg38.chr2_KI270774v1_alt 187705 49 + 223625 CACCAGCTTGTGTCAGGCACACACCCCCACCCCCGTGTCAG--GCACACCC s panTro5.chr2A 1484523 49 + 111504155 CACTCTCCAGTGTCAGGCACACATCCCCACCCCCGTGTCAG--GCACACCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1423287 49 + 114371477 CACTCTCCAGTGTCAGGCACACATCCCCACCCCCGTGTCAG--GCACACCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1447700 28 + 1464242 CACTCTCCTGTGTCAGGCACACACTCCC----------------------- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175141 47 + 81552678 CCCCACCCAGTATTAGGCACACCCCCCA--CCCTATGTTAG--GTAACCCC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1472884 44 - 111193037 --CCCTCCTGTGTCAGGCACA-CCCCCC--TCCTGTGTCAG--ACACACCC i macFas5.chr13 C 0 T 3 s chlSab2.chr14 1535098 45 - 107702431 --CCCTCCTGTGTCAGGCACATTCCCCT--TCCTGTGTCAG--GCACACCC i chlSab2.chr14 C 0 C 0 s saiBol1.JH378218 1272861 45 - 7082604 ---CCTCCTCTGTCAGGCGCACACCCCT---CCCGTGTCAGGTGCACACCC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 185271 65 + 287728 I e cebCap1.NW_016107827v1 1366200 2 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e rheMac8.chrUn_NW_015079380v1 3348 2 - 11509 I a score=20973.000000 s hg38.chr2_KI270774v1_alt 187754 16 + 223625 CACCAGCCTGTGTCAG s panTro5.chr2A 1484572 16 + 111504155 CACCAGCCTGTGTCAG i panTro5.chr2A C 0 I 377 s panPan2.chr2A 1423336 16 + 114371477 CACCAGCCTGTGTCAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1447728 11 + 1464242 -----TCCTGTGTCAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175188 16 + 81552678 CCCCACCCTGTGTCAG i nomLeu3.chr19 C 0 C 0 s chlSab2.chr14 1535143 16 - 107702431 CACCATCCTGTGTCAG i chlSab2.chr14 C 0 C 0 s saiBol1.JH378218 1272906 12 - 7082604 ----CTCCTGTGTCAG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 185271 65 + 287728 I e cebCap1.NW_016107827v1 1366200 2 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472928 3 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3348 2 - 11509 I a score=6313.000000 s hg38.chr2_KI270774v1_alt 187770 24 + 223625 GCACACTGCCCCATCCTGTGTCAC s panPan2.chr2A 1423352 22 + 114371477 GCGCACTGCCCCATCC--TGTCAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1447739 24 + 1464242 GCACACTGCCCCATCCTATGTCAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175204 23 + 81552678 GTGCACC-CCCCACCCTATGTTAG i nomLeu3.chr19 C 0 C 0 s chlSab2.chr14 1535159 21 - 107702431 GCATA---CCCCCTGCTGTGTCAG i chlSab2.chr14 C 0 C 0 s saiBol1.JH378218 1272918 11 - 7082604 GGACA-TGCCCC------------ i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 185271 65 + 287728 I e cebCap1.NW_016107827v1 1366200 2 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472928 3 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3348 2 - 11509 I e panTro5.chr2A 1484588 377 + 111504155 I a score=50317.000000 s hg38.chr2_KI270774v1_alt 187794 90 + 223625 GCACACCCTCCCACCCCCATG-TCAGGTGCACCCCTC-TTCCTGTGTCAGGCGCATCC-CCCCCACCCCGTGTCAGGCACACCCCCACCACCA s panTro5.chr2A 1484965 91 + 111504155 GCACACCCTCC-ACCCCCGTGGTCAGGTGCACCCCCCCTTCCTGTGTCAGGCGCATCCACCCCCACCCCGTGTCAGGCACACCCCC-CCACCA i panTro5.chr2A I 377 C 0 s panPan2.chr2A 1423374 40 + 114371477 GCACACCCTCCCACCCCCGTG---------------------------------------------------TCAGGCACACCCC--CCACCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1447763 89 + 1464242 GTGTACCTTCCCACCCCCGTG-TCAGGTGCACCCCCCCTTCCTGTGTCAGGCGCATC--CCCCCACCCCGTGTCAGGCACACCCCC-CCACCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175227 84 + 81552678 --GTAACCCCCCCACCCTGTG-TCAGGTGCACCCCACTATCCTATATCAGCCATATC--CCACTCTCCTGTGTCAGGCACACCC---CCACC- i nomLeu3.chr19 C 0 C 0 s chlSab2.chr14 1535180 82 - 107702431 GCACATCCCCC-CTTCCTGTG-TCAGGCGCTCCCCCC-CTCCTGTGTCAGGTGCA----CTCTCCTCCTATGTCAGGCACACCCCA-CCA--- i chlSab2.chr14 C 0 C 0 s saiBol1.JH378218 1272929 66 - 7082604 --------------TCCTCTC-TCAGGTGCACCCCCC--TCCCGTGTCAGGTGCA----CCCCCCTCCTGTGTCAGGGACACCCCC-C----- i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 185271 65 + 287728 I e cebCap1.NW_016107827v1 1366200 2 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472928 3 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3348 2 - 11509 I a score=60601.000000 s hg38.chr2_KI270774v1_alt 187884 35 + 223625 TCCTGTGTCAAGCACA-A-CCCCCCTCCTGTGTCAGG s panTro5.chr2A 1485056 35 + 111504155 TCCTGTGTCAAGCACA-A-CCCCCCTCCTGTGTCAGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1423414 34 + 114371477 TCCTGTGTCAAGCAC--A-CCCCCCTCCTGTGTCAGG i panPan2.chr2A C 0 I 122 s gorGor5.CYUI01015607v1 1447852 12 + 1464242 TCCTGTGTCAGG------------------------- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175311 32 + 81552678 ----GTGTCAGGCACACA-CCACCCTCCTGGGTCAAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 3350 34 - 11509 TCCTGTGTCAGACAC--A-CCCCCCTCCTGTGTCAGG i rheMac8.chrUn_NW_015079380v1 I 2 C 0 s chlSab2.chr14 1535262 34 - 107702431 TCCTGTGTCAGGCAT--A-CCCCCCTCCTGTGTCAGG i chlSab2.chr14 C 0 C 0 s saiBol1.JH378218 1272995 34 - 7082604 TCCTCTGTCAGGCGC--A-CCCCCCTCCCGTGTCAGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1366202 35 + 1864846 TCCTGTGTCAGGCAT--ACCCCCCCTCCTGTGTCAGG i cebCap1.NW_016107827v1 I 2 C 0 e aotNan1.NW_018513311v1 185271 65 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472928 3 - 111193037 T a score=7928.000000 s hg38.chr2_KI270774v1_alt 187919 7 + 223625 TACAGCC s panTro5.chr2A 1485091 4 + 111504155 TACA--- i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1447864 7 + 1464242 TACACCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175343 7 + 81552678 CACACAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 3384 7 - 11509 CACACCC i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s chlSab2.chr14 1535296 7 - 107702431 CACACCC i chlSab2.chr14 C 0 C 0 s saiBol1.JH378218 1273029 7 - 7082604 TGCACCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1366237 7 + 1864846 CACACCC i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 185271 65 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472928 3 - 111193037 T e panPan2.chr2A 1423448 122 + 114371477 I a score=3000.000000 s hg38.chr2_KI270774v1_alt 187926 2 + 223625 CC s gorGor5.CYUI01015607v1 1447871 2 + 1464242 CC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175350 2 + 81552678 CC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 3391 2 - 11509 CC i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s chlSab2.chr14 1535303 2 - 107702431 CC i chlSab2.chr14 C 0 I 156 s cebCap1.NW_016107827v1 1366244 2 + 1864846 CC i cebCap1.NW_016107827v1 C 0 I 10 e aotNan1.NW_018513311v1 185271 65 + 287728 I e saiBol1.JH378218 1273036 0 - 7082604 C e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472928 3 - 111193037 T e panPan2.chr2A 1423448 122 + 114371477 I e panTro5.chr2A 1485095 0 + 111504155 C a score=600.000000 s hg38.chr2_KI270774v1_alt 187928 1 + 223625 C s gorGor5.CYUI01015607v1 1447873 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175352 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 3393 1 - 11509 C i rheMac8.chrUn_NW_015079380v1 C 0 I 98 e aotNan1.NW_018513311v1 185271 65 + 287728 I e saiBol1.JH378218 1273036 0 - 7082604 C e cebCap1.NW_016107827v1 1366246 10 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535305 156 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472928 3 - 111193037 T e panPan2.chr2A 1423448 122 + 114371477 I e panTro5.chr2A 1485095 0 + 111504155 C a score=6421.000000 s hg38.chr2_KI270774v1_alt 187929 28 + 223625 AACCCCCATGTCAGGCACACCCCCACTC s panTro5.chr2A 1485095 9 + 111504155 -------------------CCCCCATTC i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1447874 28 + 1464242 AACCCCCATGTCAGACACACCCTCACTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175353 28 + 81552678 CAACCCCATGTCAGGCACACTCCCACCC i nomLeu3.chr19 C 0 I 168 e aotNan1.NW_018513311v1 185271 65 + 287728 I e saiBol1.JH378218 1273036 0 - 7082604 C e cebCap1.NW_016107827v1 1366246 10 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535305 156 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472928 3 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3394 98 - 11509 I e panPan2.chr2A 1423448 122 + 114371477 I a score=52056.000000 s hg38.chr2_KI270774v1_alt 187957 215 + 223625 CTTTTGTTGTTGTTGttgtttgtttttatttcttctaaaaaaaaa------gtgataaatgatgtgaagaacatgcaggtttgttacataggtatacgtgtgccatggtggtttgctgcacctattgacccatcctctaag-ttcctcccctcatcctccacccctcaacaggccccagtgtgtgctgttctcctttctgtgtccatgCAAAGGAACCATTT s panTro5.chr2A 1485104 218 + 111504155 CTTTTGTTGTTGttgtt---tgtttttatttcttctaaaaaaaaaaaaaaagtgataaatgatgtgaagaacgtgcaggtttgtcacacaggtatacgtgtgccatggtggtttgctgcacctactgacccatcctctaag-ttcctcccctcatcctccacccctcaacaggccccagtgtgtgctgttcccctctctgtgtccatgtgAAGCAACCATTT i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1447902 212 + 1464242 CTTTTGTTGTTGT-------TGTTTTTCTTTATTCTAAAAAAAAA---AAAGTGATAAATGatgtgaagaacgtgcaggtttgttacataggtatacgtgtgccatggtggtttgctgcacctattgacccatcctctaagtttcctcctctcatcctccacccctcaacaggccccggtgtgtgctgttcccctctctgtgtccatgtgAAGGAACCATTT i gorGor5.CYUI01015607v1 C 0 C 0 e aotNan1.NW_018513311v1 185271 65 + 287728 I e saiBol1.JH378218 1273036 0 - 7082604 C e cebCap1.NW_016107827v1 1366246 10 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535305 156 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472928 3 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3394 98 - 11509 I e nomLeu3.chr19 1175381 168 + 81552678 I e panPan2.chr2A 1423448 122 + 114371477 I a score=15006.000000 s hg38.chr2_KI270774v1_alt 188172 30 + 223625 GTTTACTTAGGGGTTGCGGAGAAATTCTTG s panTro5.chr2A 1485322 30 + 111504155 GTTTACTTAGGGGTTGCGGAGAAATTCTTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1423570 30 + 114371477 GTTTACTTAGGGGTTGCGGAGAAATTCTTG i panPan2.chr2A I 122 C 0 s gorGor5.CYUI01015607v1 1448114 30 + 1464242 GTTTACTTAGGGATTGGGGAGAAACTCATG i gorGor5.CYUI01015607v1 C 0 I 25 e aotNan1.NW_018513311v1 185271 65 + 287728 I e saiBol1.JH378218 1273036 0 - 7082604 C e cebCap1.NW_016107827v1 1366246 10 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535305 156 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472928 3 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3394 98 - 11509 I e nomLeu3.chr19 1175381 168 + 81552678 I a score=4206.000000 s hg38.chr2_KI270774v1_alt 188202 25 + 223625 TGGCTTTCTTTT-TGGCAG---TTTTTTT s panTro5.chr2A 1485352 27 + 111504155 TGGTTTTTTTTC-TGGCAG-TTTTTTTTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1423600 29 + 114371477 TGGttttttttcttggcagtttttttttt i panPan2.chr2A C 0 C 0 e aotNan1.NW_018513311v1 185271 65 + 287728 I e saiBol1.JH378218 1273036 0 - 7082604 C e cebCap1.NW_016107827v1 1366246 10 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535305 156 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472928 3 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3394 98 - 11509 I e nomLeu3.chr19 1175381 168 + 81552678 I e gorGor5.CYUI01015607v1 1448144 25 + 1464242 I a score=315993.000000 s hg38.chr2_KI270774v1_alt 188227 710 + 223625 TTTTTTAGttttattattattatactttaagttttagggtacatgtgcacaacgtgcaggtttgttacatatgtatacatgtgccatgttggtgtgctgcacccattaactcgtcatttaacatttggtatatctcctaatttaacatttggtatatctcctaatgctatccttcccccctcccccaaccccacaacaggccctggtgtgtgatgttccccttcctgtgtccatgtgttctcatt-gttcaattctc-acctatgagtgagaacatgcggtgtttggttttttgtccttgggatagtttgctgagaatgatggtttccagtttcatccatgtccctacaaaggacatgaactcatca---tttatggctgcatagtattctatggtatat--atgtgccacattttcttaatccagtctatcattgttggacatttgggttggttccaagtctt-tgctattgtgaatagtgctg-caataaacatatgtgtgcatgtgt-ctttatagcagcatgatttatagtcctttgggtgtatacccagtaatgggattgctgggtcaaatggtatttctagttctagatccctgaggaatcgccacactgccttccacaatggttgaactagtttacagtcccaccaacagtgtaaaagtgttcctatttcttcacatcctctccagcacctg-ttgtttcctgactttttaatg s panTro5.chr2A 1485379 695 + 111504155 TTTTTTAGttttattactattatacttaaagttttagggtacatgtgcacaacgtgcaggtttgttacatatgtatacatgtgccatgttggtgtgctgcacccactaactcgtcatttaacatttggtatatctcctaatttaacatttggtatatctcctaatgctatccctccccccacccaca----caca-----ccct-gtgtgtgatgtt-cccttcctgtgtccatgtgttctcattggttcaattctcaacctatgagtgacaacatgcggtgtttggttttttgtccttgcgatag-ttgctgagaatgatggtttccag-ttcatccatgtccctacaaaggacatgaactcatca---tttatggg-gcatagtattctatggtgtattaatgtgccacatttt-ttaatccagtctagcactgat-gacattt-ggttggttccaagtcttgtgctatt-ttaatagtgctgccagtaaacatacgtgtgcatgtgtcctttatagtagcatgatttataatccttggtat-tatgccaagtaatgggattgctgggtcaaatggcatttctagttctagatccttgag--atcgtcacactgtcttccac-atggttgaactactttccagtccacccaacagtgtaaaagcattcct-tttctccacatcctctccagcacctgtttgtttcctgactttttaatg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1423629 702 + 114371477 ttttttagttttattactattatacttaaagttttagggtacatgtgcacaacgtgcaggtttgttacatatgtatacatgtgccatgttggtgtgctgcacccactaactcgtcatttaacatttggtatatctcctaatttaacatttggtatatctcctaatgctatccctccccccaccc-------cacaacaggccctggtgtgtgatgttccccttcctgtgtccatgtgttctcatt-gttcaattctc-acctatgagtgacaacatgcggtgtttggttttttgtccttgcgatagtttgctgagaatgatggtttccagtttcatccatgtccctacaaaggacatgaactcatca---tttatggcggcatagtattctatggtgtat--atgtgccacattttcttaatccagtctagcactgatggacatttgggttggttccaagtctt-tgctattttaaatagtgctg-cagtaaacatacgtgtgcatgtgt-ctttatagtagcatgatttataatcccttgggtatatgccaagtaatgggattgctgggtcaaatggcatttctagttctagatccttgaggaatcgtcacactgtcttccacaatggttgaactactttacagtcccaccaacagtgtaaaagcattcct-tttctccacatcctctccagcacctg-ttgtttcctgactttttaatg i panPan2.chr2A C 0 M 1395 s gorGor5.CYUI01015607v1 1448169 685 + 1464242 ttttttaattttat---tattatactttaagttttagggtacatgtgcacaacatgcaggttagttacatatgtatacatgtaccatgttggtgtgctgcacacattaactcgtcatttagcat-------------taat-----------tatatctcctaatgctatccctccccactcccccaccc-cacaacaggccccagtgtgtgatgttccccttcctgtgtccatctgttctcatt-gttcaattctc-aactatgagtgagaacatgtggtgtttgattttttgtctttgccacagtttgctaagaatgatggtttccagtttcatccatgtccctacaaaggacatgaactcatcattttttatggctgcatagtattccatggtgtat--atgtgccacattttcttaatccagtctatcattgttggacatttgggttggttccaagactt-tgctattgtaaatagtgcca-caataaacatatgtgtgcatgtgt-ctttatagcagcatgatttatagtcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttctagttctagatccctgaggaatcgccacactgtcttccacaatggttgaactagtttacagtcccaccaacagtgtaaaagtgttcctatttcttcacatcctctccagcacctg-ttgtttcctgactttttaatg i gorGor5.CYUI01015607v1 I 25 C 0 e aotNan1.NW_018513311v1 185271 65 + 287728 I e saiBol1.JH378218 1273036 0 - 7082604 C e cebCap1.NW_016107827v1 1366246 10 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535305 156 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472928 3 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3394 98 - 11509 I e nomLeu3.chr19 1175381 168 + 81552678 I a score=68316.000000 s hg38.chr2_KI270774v1_alt 188937 318 + 223625 attgtcattc-caactggtgtgagatggtatctcattgtggttttg-atttgcatttctctgatggccagtgatggtga-gcattttttcatgtg-ttttttggctgcataaatgtcttcttttgagaagtgtctgttcatatccttcacccgctttttgatggggttgtttgtttttttcttgtaaatttgtttgagttcattgtagattctggatattagccctttgtcaa-atgagtaggttgcaaaaattttctcccattctgtaggttgcctgttcagtctgatagtagtttcttttgctgtgcagaagctctttagt s panTro5.chr2A 1486074 316 + 111504155 atcgccattcgcaactggtgtgagatggtatctcattgtggttttg-atttgcatttctctaatgaccagtaatgatgagggatttcttcatgtg--tctgtggctgcataaatgtcttc-tttaagaagtgtctgttc-tatccttttgcccacttttggtgggtttgtttgttttttccttgtaaattggtttgcattttttgtagattctggatattagccctttgtcagtatg-gtagattgcaaaaattttctcccattctgtaggttgcctgttcactctgatggtggtttcttttgctgtgcagaagctc-ttagt i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1448854 319 + 1464242 attgccattc-taactggtgtgagatggtatttcattgtggttttgcatttgcatttctctgatggccagtgatcatga-gcattttttcatgtgtttttttggctgcataaatgtcttcttttgagaagtgtctgttcatatcctttgcccactttttgatggtgttgtttgtttttt-cttgtaaatttgtttgagttcattgtagattctggatattagccctttgtcaa-atgagtaggttgcaaaaattttctcccattttgtgggttgcctgttcactctgatggtagtttcttttgctgtgcagaagctctttagt i gorGor5.CYUI01015607v1 C 0 C 0 e aotNan1.NW_018513311v1 185271 65 + 287728 I e saiBol1.JH378218 1273036 0 - 7082604 C e cebCap1.NW_016107827v1 1366246 10 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535305 156 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472928 3 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3394 98 - 11509 I e nomLeu3.chr19 1175381 168 + 81552678 I e panPan2.chr2A 1424331 1395 + 114371477 M a score=119556.000000 s hg38.chr2_KI270774v1_alt 189255 240 + 223625 ttaattagatcccatttgtcaattttggcttttgttgccattgcttttggtg-ttttagacatgaagtccttgcccatgcctatgtcctgaatggtattgcctaggttttcttctagggtttttatggttttagg--tctaacatgtaagtctttaatccatcttgaatt-aatttttgtataaggtgtaaggaagggatccagtttcagctttctacatatggctagccagttttcccagcac s panTro5.chr2A 1486390 241 + 111504155 ttaattagatcccatttgtcaattttggttttgtttgccattgcttttggtgtttttagacatgaagtccttgcccatgcctatgtcctgaatggtattg-ctaggttttcttctaggtttttaatggttttaggtttctaacatgtaagtcttt--tccatcttgaattaaatttttgtataaggtgtaaggaagggatccagtttcacctttctacatatggctagccagttttcccagcat i panTro5.chr2A C 0 I 10904 s panPan2.chr2A 1425726 240 + 114371477 ttaattagatcccatttgtcaattttggcttttgttgccattgcttttggtg-ttttagacatgaagcccttgcccatgcctatgtcctgaatggtattgcctaggttttcttctagggtttttatggttttagg--tctaacatgtaagtctttaatccatcttgaatt-aatttttgtataaggtgtaaggaagggatccagtttcagctttctacatatggctagccagttttcccagcac i panPan2.chr2A M 1395 C 0 s gorGor5.CYUI01015607v1 1449173 238 + 1464242 tcaattagatcccatttgtcaattttggcttttgttgccattgcttttggtg-ttttagacatgaagtccttgcccatgcctatgtcctgaatggtattgcctaggttttcttctagggtttttatggttttagg--tctaacatgtaagtctgtaatccatcttg-att-aa-ttttgtataagatgtaaggaagggatccagtttcagctttctacatatggctagccagttttcccagcac i gorGor5.CYUI01015607v1 C 0 C 0 e aotNan1.NW_018513311v1 185271 65 + 287728 I e saiBol1.JH378218 1273036 0 - 7082604 C e cebCap1.NW_016107827v1 1366246 10 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535305 156 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472928 3 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3394 98 - 11509 I e nomLeu3.chr19 1175381 168 + 81552678 I a score=1149041.000000 s hg38.chr2_KI270774v1_alt 189495 2164 + 223625 catttattaaatagggaatcatttccccattg-ttgtttttgtcaggtttgtcaaagatcagatagttgtagatatgtggcattattactgagggctctgttctgttccattggtctatatctctgttttggtaccagtaccatgctgttttggttactgtagccttgtagtatagtttgaagtcaggtagtgtggtgcctcccactttgttcttttggcttaggattgacttggcaatgtgggctcttttttggttccatatgaactttaaagtagttttttccaattctgtgaagaaagtcattggtagcttgatggggatggcattgaatctataaattaccttgggcagtatggtcattttcaccatattgattcttcctacccatgagcatggaatgttcttccatttgtttgtatcctcttttatttcattgagcagtggtttgtagttctccttcaagaggtccttcacatcccttgtaagttggattcctaggtattttattctctttgaagcaattgtgaatgggagttcactcatgatttggctctctgtttgtctgttattggtgtataagaatgcttgtgatttttgtacattgattttgtatcctgagactttgctgaagttgcttatcagcttaaggagattttgggctgagatgatggggttttctagatatacaatcatgtcatctgcaaacagggacaatttgacttcctcttttcctaattgaataccctttatttctttctcctgcctgattgccctggccagaacttccaacactatgttgaataggagtggtgagagaaggcatccctgttttgtgccagttttcaaagggaatgcttccagtttttgcccattcagtatgatgttggctgtgggtttgtcatagatagctcttattattttgagatacttcccatcaatacctaatttattgagagtttttagcatgaagggttgttgaattttgtcaaaggccttttctgcatctattgagataatcatgtggtttttgtctttgattctgtttatatgctggattacatttatcgatttgcgtatgttgaaccagccttgcatcccagggatgaagcccacttgatcatggtggataagctttttcatttgctgctggattcggtttgccagtattttattgaggatttttgcatcaatgttcatcaaggatattggtctaaaattctcttttttggttgtgtctctgcccggctttggtatcaggatgatgctggcctcataaaatgagttagggaggattcccgctttttgtattgattggaatagtttcagaaggaatggtaccagctcctccttgtacctctggtagaattcggctgtgaatccatctggtcctggactttttttggttggtaagctattgattattgcctcaatttcagagcctgttattggtctattcagagattcaacttcttcctggtttag-tcttgggaagaagtatgtgtcgaggaatttatccatttcttctagattttctagtttatttgcgtagaggtgtttatagtattctctgatggtagtttgtatttctttgggatcagtggtgatatcccctttatcattttttgttgcgtctatttgattcttctctcttttcttctttattagtcttgctagcggtctatcaattttgttgatcttttcaaaaaaccagctcctggattcattaattttttgaaggg-ttttatgtatctctatttccttcagttctgctctgatcttcgttatttcttgccttctgctagcttttgaatgtgtttgctcttgcttttctagttcttttaattgtgatgttaggatgtcaattttagatctttcctgctttctcttgtgggcatttagtgctataaatttccctctacacactgctttgaatgtgtcccagagattgtggtatgttgtgtctttgttctcgttcgtttcaaagaacatctttatttctgccttcattttgttatgtatccagtagtcattcaggagcaggttgttcagtttccatgtagttgagcggttttgagtgagtttctgaatcctgagttctagtttgattgcactgtggtcggagagacggtttgtt---atttctgttcttttacatctgctgaggag s panTro5.chr2A 1497535 2159 + 111504155 catttattaaatagggaatcctttccccattg-ttgtttttgtcaggtttgtcaaagatcagatagttgtagatatgtggcattattactgagggctctgttctgttccattggtctatatctctgttttggtaccagtaccatgctcttttggttactgtagccttgtagtatagtttgaagtcaggtagtgtgatgcctcccactttgttcttttggcttaggattgacttggcgatgcgggctcttttttggttccatatgaactttaaagtagttttttccaattctgtgaagaaagtcattggtagtttgatggggatggcattgaatctataaattaccttgggcagtatggtcattttcaccatattgattcttcctacccatgagcatggaatgttcttccatttgtttgtatcctcttttatttccttgagcagtggtttgtagttctccttcaagaggtccttcccatcccttgtaagttggattcctaggtattttattctctttgaagcaattgtgaatgggagttcactcatgatttggctct--gtttgtctcttattgctgtagaggaatgcttgtgatttttgcacattgattttgtatcctgagactttgctgaagttgcttatcagcttaaggagattttgggctgagatgatggggttttctagatatacaatcatgtcatctgcaaacagggacaatttgacttcctcttttcctaattgaataccctttatttctttctcctgcatgattgccctggccagaacttccaacactatgttgaataggagtggcgagagaaggcatccctgtcttgtgccagttttcaaagggaatgcttccagtttttgcccattcagtatgatgttggctgtgggtttgtcatagatagctcttattattttgagatacttcccatcaatacctaatttattgagagtttttagcatgaagggttgttgaattttgtcaaaggccttttctgcatctattgagataatcatgtggtttttgtctttgattctgtttatttgctggattacatttatggatttgcgtatgttgaaccagccttgcatcccagggatgaagcctacttgatcatggtggataagctttttgatgtgctgctggattcggtttgccagtattttattgaggatttttgcatcaatgttcatca-ggatattggtctaaaattctcttttttggttgtgtctctgcccggctttggtatcaggatgatgctggcctcataaaatgagttagggaggattccctctttttctattgattggaatagtttcagaagggatggtaccagctcctccttgtacctctggtagaattcagctgtgaatccatctggtcctggactttttt-ggttggtaagctattgattattgcctcaatttcagagcctgttattggtctattcagagattcaacttcttcctggtttag-tcttgggaggaagtacgtgtcgaggaatttatccatatcttctagattttctagtgtatttgtgtagaggtgtttatagtattctctgatggtggtttgtatttctgtgggatcggtggtgataccccctttatcattttttattgcgtctacttgattcttctctcttttcttctttattagtcttgctagcggtctatcagttttgttgatcttttcaaaaaaccagctcctggattcattaattttttgaaggg-ttttatgtatctctatttccttcagttctgctctgatcttcgttatttcttgccttctgctagcttttgaatgtgtttgctcttgcttttctagttcttttaattgtgatgttagggtatcaattttagatcttccctccattctcttgtgggcatttagtgctgtaaatttccctctacacactgctttgaatgtgtcccagagat-gtggtatgttgtgtctttgttctcgttcgtttcaaagaacatctttatttctgccttcatttcgttatgtacccagtagtcattcaggagcaggttgttcagtttccatgtagttgagcggttttgagtgagtttctgaatcctgagttctagtttgattgcactgtggtcggagagacagtttgtt---atttctgttcttttacatttgctgaggag i panTro5.chr2A I 10904 C 0 s panPan2.chr2A 1425966 2159 + 114371477 catttattaaatagggaatcctttccccattg-ttgtttttgtcaggtttgtcaaagatcagatagttgtagatatgtggcattattactgagggctctgttctgttccattggtctatatctctgttttggtaccagtaccatgctcttttggttactgtagccttgtagtatagtttgaagtcaggtagtgtgatgcctcccacttttgtcttttggcttaggattgacttggcgatgtgggctcttttttggttccatatgaactttaaagtagttttttccaattctgtgaagaaagtcattggtagtttgatggggatggcattgaatctataaattaccttgggcagtatggtcattttcaccatattgattcttcctacccatgagcatggaatgttcttccatttgtttgtatcctcttttatttccttgagcagtgatttgtagttctccttcaagaggtccttcccatcccttgtaagttggattcctaggtattttattctctttgaagcaattgtgaatgggagttcactcatgatttggctct--gtttgtctcttattgctgtagaggaatgcttgtgatttttgcacattgattttgtatcctgagactttgctgaagttgcttatcagcttaaggagattttgggctgagatgatggggttttctagatatacaatcatgtcatctgcaaacagggacaatttgacttcctcttttcctaattgaataccctttatttctttctcctgcatgattgccctggccagaacttccaacactatgttgaataggagtggcgagagaaggcatccctgtcttgtgccagttttcaaagggaatgcttccagtttttgcccattcagtatgatgttggctgtgggtttgtcatagatagctcttattattttgagatacttcccatcaatacctaatttattgagagtttttagcatgaagagttgttgaattttgtcaaaggccttttctgcatctattgagataatcatgtggtttttgtctttgattctgtttatttgctggattacatttatggatttgcgtatgttgaaccagccttgcatcccagggatgaagcctacttgatcatggtggataagctttttgatgtgctgctggattcggtttgccagtattttattgaggatttttgcatcaatgttcatca-ggatattggtctaaaattctcttttttggttgtgtctctgcccggctttggtatcaggatgatgctggcctcataaaatgagttagggaggattccctctttttctattgattggaatagtttcagaaggaatggtaccagctcctccttgtacctctggtagaattcagctgtgaatccatctggtcctggactttttt-ggttggtaagctattgattattgcctcaatttcagagcctgttattggtctattcagagattcaacttcttcctggtttag-tcttgggaggaagtacgtgtcgaggaatttatccatttcttctagattttctagtgtatttgtgtagaggtgtttatagtattctctgatggtggtttgtatttctgtgggatcggtggtgatatcccctttatcattttttattgcgtctatttgattcttctctcttttcttctttattagtcttgctagcggtctatcagttttgttgatcttttcaaaaaaccagctcctggattcattaattttttgaaggg-ttttatgtatctctatttccttcagttctgctctgatcttcgttatttcttgccttctgctagcttttgaatgtgtttgctcttgcttttctagttcttttaattgtgatgttagggtatcaattttagatcttccctccattctcttgtgggcatttagtgctgtaaatttccctctacacactgctttgaatgtgtcccagagat-gtggtatgttgtgtctttgttctcgttggtttcaaagaacatctttatttctgccttcatttcgttatgtacccagtagtcattcaggagcaggttgttcagtttccatgtagttgagcggttttgagtgagtttctgaatcctgagttctagtttgattgcactgtggtcggagagacagtttgtt---atttctgttcttttacatttgctgaggag i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1449411 2165 + 1464242 catttattaaatagggaatcctttccccattgcttgtttttgtcaggtttgtcaaagatcagatagttgtagatatgtggcattatttctgagggctctgttctgttccattggtctatatctctgtattggtaccagcaccatgctgttttggttactgtagccttgtagtatagtttgaagtcaggtagtgtgatgcctcccactttgttcttttggcttaggattgacttggcaatgcaggctcttttatggttccatatgaactttaaagtagttttttccaattctgtgaagaaagtctttggtagcttggtggggatggcattgaatctataaattaccttgggcagtatggccatttgcatgatattgattcttcctacccatgagcatggaatgttcttccatttgtttgtatcctcttttatttcattgagcagtggtttgtagttctccttgaagaggtccttcacatcccttgtaagttggattcctaggtattttattctctttgaagcaattgtgaatgggagttcactcatgctttggctctctgtttgtctgttattggtgtataagaatgcttgtgatttttgtacattgattttgtatcctgagactttgctgaagttgcttatgagcttaaggagattttgggctgagacgatggggttttctagatatacaatcatgtcatctgcaaacagcgacaatttgacttcctcttttcctaattgaataccctttatttccttctcctgcctgattgccctggccagaacttccaacactatgttgaataggagtggtgagagagggcatccctgtcttgtgccagttttcaaagggaatgcttccagtttttgcccattcagtatgatattggctgtgggtttgtcatagatagctcttactattttgagatacttcccatcaatacctaatttattgagagtttttagtatgaagtgttgttgaattttgtcaaaggccttttctgcatctactgagataatcatgtggtttttgtctttggttctgtttatatgctggattacatttattgatttacgtacgttgaaccagccttgcatcccagggatgaagcccacttgatcatggtggataagctttttgatgtgctgctggattc-gtttgccagtattttattgaggatttttgcatcaatgttcatcaaggatattggtctaaaattctctttttt-gttgtgtctctgccaggctttggtatcaggatgatgctagcctcataaaatgagttagggaggattccctctttttctattga-tggaatagtttcagaaggaatggtaccagctcctccttgtacctctggtagaattcggctatgaatccatctgctcctcaactttttttggttgttaggctattgattattgcctcaatttcagagcctgttattggtctattcagagattcaacttcttcctggtttagttcttgggaggatgtatatgttgaggaatttatccatttcttctagattttctagtttatttgcatagagatgtttgtagtattctctgatggtagtttgtatttctgtgggatcggtggtgatatcccctttatcattttttattgcatctatttgattcttctctctttttttctttattagtcttgctagtggtctatcaattttgttgatcttttcaaaaaaccagctcctggattcattaa--ttttgaagggtttttttgtgtctctatttccttcagttctgctcggattttagttatttcttgccttctgctagcttttgaatgtgtttgctcttgcttttctagttcttttaattgtgatgttagggtgtcaattttggatctttcctgctttctcttgtgggcatttagtgctataaatttccctctacacactgctttgaatgtgtcccagagactctggtatgttgtgtctttgttctcgttggtttcaaagaacatctttatttctgccttcatttcgttatgtacccagtagtcattcaggagcaggttgttcagtttccatgtagttgagcggttttgagtgagtttcttaatcctgagttctagtttgactgcactgtggtcggagagacggtttgttataatttctgttcttttacatttgctgaggag i gorGor5.CYUI01015607v1 C 0 C 0 e aotNan1.NW_018513311v1 185271 65 + 287728 I e saiBol1.JH378218 1273036 0 - 7082604 C e cebCap1.NW_016107827v1 1366246 10 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535305 156 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472928 3 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3394 98 - 11509 I e nomLeu3.chr19 1175381 168 + 81552678 I a score=1365.000000 s hg38.chr2_KI270774v1_alt 191659 1 + 223625 a s panTro5.chr2A 1499694 1 + 111504155 a i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1428125 1 + 114371477 a i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1451576 1 + 1464242 a i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175549 1 + 81552678 A i nomLeu3.chr19 I 168 C 0 s cebCap1.NW_016107827v1 1366256 1 + 1864846 A i cebCap1.NW_016107827v1 I 10 C 0 e aotNan1.NW_018513311v1 185271 65 + 287728 I e saiBol1.JH378218 1273036 0 - 7082604 C e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535305 156 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472928 3 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3394 98 - 11509 I a score=8175.000000 s hg38.chr2_KI270774v1_alt 191660 5 + 223625 gGCAC s panTro5.chr2A 1499695 5 + 111504155 gGCAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1428126 5 + 114371477 gGCAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1451577 5 + 1464242 gGCAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175550 5 + 81552678 GGGAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 3492 5 - 11509 GGCAC i rheMac8.chrUn_NW_015079380v1 I 98 C 0 s cebCap1.NW_016107827v1 1366257 5 + 1864846 GGCAT i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 185271 65 + 287728 I e saiBol1.JH378218 1273036 0 - 7082604 C e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535305 156 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472928 3 - 111193037 T a score=57602.000000 s hg38.chr2_KI270774v1_alt 191665 27 + 223625 ACCCC-CACTCCTGTGTCAGGCACACCC s panTro5.chr2A 1499700 27 + 111504155 ACCCC-CACTCCTGTGTCAGGCACACCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1428131 27 + 114371477 ACCCC-CACTCCTGTGTCAGGCACACCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1451582 27 + 1464242 ACCCC-CACCCCAGTGTCAGGCACACCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175555 28 + 81552678 ACCCCACTCTCTTGTTTCAGGGACACCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 3497 26 - 11509 ACCCC-C-CTCCTGTGTCAGGCACACCC i rheMac8.chrUn_NW_015079380v1 C 0 I 142 s cebCap1.NW_016107827v1 1366262 27 + 1864846 ACCCC-CCCTCCTGTGTCAGGCACACCC i cebCap1.NW_016107827v1 C 0 I 618 s aotNan1.NW_018513311v1 185336 27 + 287728 ACCCC-CCCTCCTGTGTCAGGCACACCC i aotNan1.NW_018513311v1 I 65 I 186 e saiBol1.JH378218 1273036 0 - 7082604 C e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535305 156 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472928 3 - 111193037 T a score=115639.000000 s hg38.chr2_KI270774v1_alt 191692 177 + 223625 GCCCTCTTCTTTCAGGGACACCACACCCTCTTGTATCGGGCACAGGATACCCTCTTCTTTCAGGGACAGCACAGCCTCTTGTTTCAGGGACACCACACCCTCTTGTTTCAGGGACACCACATCCTCCTGTTTCAGGCACAGGATACCCTCTTGTTTGAGGGACACCCCACCCTCTTG s panTro5.chr2A 1499727 177 + 111504155 ACCCTCTTGTTTCAGGGACACCACACCCTCTTGTTTCCGGCACACCCCACCCTCTTGTGTCAGGGACACCCTACCCTCTTGTTTCAGGGACACCACACCCTCTTGTTTCAGGGACACCACACCCTCTTGTTTCAGGGACACCACACCCTCTTGTTTCAGGGACACCCCACCCTCTTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1428158 153 + 114371477 ACCCTCTTGTTTCAGGGACACCACACCCTCTTGTTTCCGGCACACCCCACCCTCTTGTGTCAGGGACACCACACCCTCTTGTTTCAGGGACACCACACCCTCTTGTTTCAGGGACACCAC------------------------ACCCTCTTGTTTCAGGGACACCCCACCCTCTTG i panPan2.chr2A C 0 I 23 s gorGor5.CYUI01015607v1 1451609 175 + 1464242 CCCATCTTGTTTCAGGCACACCACACCCTCTTGTTTCAGGGATACCACACCCTCTTCTTTCAGGCACATCCC-CCATCTTGTTTCAGGGACCCCACACCCTCTTGTTTCAGGCACACCCCA-CCTCTTATTTCAGGAACACGACACCCTCTTGTTTCAGGCATACCACACCCTCTTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175583 177 + 81552678 ACCCTCTCGTTTCAGGGACACCCCACCCTCTCATTTCAGGGACACCCCACCCTCTCATTTCAGGGACACCCCACCCTCTCGTTTCAGGGACACCCCACCCTCTCGTTTCAGGGACACCCCACCCTCTCGTTTCAGGGACATCCCACCCTCTCGTTTCAGGGACACCCCACCCTCTTG i nomLeu3.chr19 C 0 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273036 0 - 7082604 C e cebCap1.NW_016107827v1 1366289 618 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535305 156 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472928 3 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I a score=546.000000 s hg38.chr2_KI270774v1_alt 191869 1 + 223625 T s panTro5.chr2A 1499904 1 + 111504155 T i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1451784 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175760 1 + 81552678 T i nomLeu3.chr19 C 0 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273036 0 - 7082604 C e cebCap1.NW_016107827v1 1366289 618 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535305 156 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472928 3 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I e panPan2.chr2A 1428311 23 + 114371477 I a score=25210.000000 s hg38.chr2_KI270774v1_alt 191870 33 + 223625 TTCTGGGAAACCACAACCTCTTGTTTCAGGCAC s panTro5.chr2A 1499905 33 + 111504155 TTCAGGGACACCCCACCCTCTTGTTTCAGGGAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1428334 33 + 114371477 TTCAGGGACACCCCACCCTCTTGTTTCAGGCAC i panPan2.chr2A I 23 C 0 s gorGor5.CYUI01015607v1 1451785 33 + 1464242 TTCAGGCACTCCCCACCCTCTTGTTTCAGGCAC i gorGor5.CYUI01015607v1 C 0 I 46 s nomLeu3.chr19 1175761 33 + 81552678 TTCAGGGACACCCCACCCTCTTGTTTCAGGGAC i nomLeu3.chr19 C 0 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273036 0 - 7082604 C e cebCap1.NW_016107827v1 1366289 618 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535305 156 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472928 3 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I a score=3731.000000 s hg38.chr2_KI270774v1_alt 191903 15 + 223625 AG---GATACCCTCTTGT s panTro5.chr2A 1499938 15 + 111504155 AC---CCCACCCTCTTGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1428367 18 + 114371477 ACACACCCACCCTCTTGT i panPan2.chr2A C 0 T 74 s nomLeu3.chr19 1175794 14 + 81552678 ----ACACACCCTCTTGT i nomLeu3.chr19 C 0 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273036 0 - 7082604 C e cebCap1.NW_016107827v1 1366289 618 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535305 156 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472928 3 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I e gorGor5.CYUI01015607v1 1451818 46 + 1464242 I a score=8484.000000 s hg38.chr2_KI270774v1_alt 191918 18 + 223625 TTCAGGGACACCCCACCC s panTro5.chr2A 1499953 18 + 111504155 TTCAGGGACACCCCACCC i panTro5.chr2A C 0 I 173 s panPan2.chr2A 1428311 18 + 114371477 TTCAGGGACACCCCACCC i panPan2.chr2A T 74 C 0 s nomLeu3.chr19 1175808 18 + 81552678 TTCAGGCACACCCCAGCA i nomLeu3.chr19 C 0 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273036 0 - 7082604 C e cebCap1.NW_016107827v1 1366289 618 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535305 156 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472928 3 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I e gorGor5.CYUI01015607v1 1451818 46 + 1464242 I a score=6004.000000 s hg38.chr2_KI270774v1_alt 191936 16 + 223625 TCTTCTTTCGGGGATA s panTro5.chr2A 1500144 16 + 111504155 TCTTGTTTCAGGGACA i panTro5.chr2A I 173 C 0 s panPan2.chr2A 1428329 15 + 114371477 TCTTG-TTCAGGGACA i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1175826 16 + 81552678 TCTTGTTTCGGGGACA i nomLeu3.chr19 C 0 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273036 0 - 7082604 C e cebCap1.NW_016107827v1 1366289 618 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535305 156 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472928 3 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I e gorGor5.CYUI01015607v1 1451818 46 + 1464242 I a score=4000.000000 s hg38.chr2_KI270774v1_alt 191952 4 + 223625 CCCC s panTro5.chr2A 1500160 4 + 111504155 CCCC i panTro5.chr2A C 0 I 165 s panPan2.chr2A 1428344 4 + 114371477 CCCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1451864 4 + 1464242 CCCC i gorGor5.CYUI01015607v1 I 46 C 0 s nomLeu3.chr19 1175842 4 + 81552678 CCCC i nomLeu3.chr19 C 0 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273036 0 - 7082604 C e cebCap1.NW_016107827v1 1366289 618 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535305 156 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472928 3 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I a score=17676.000000 s hg38.chr2_KI270774v1_alt 191956 20 + 223625 ATCCTCTTGTTTCAGGCACA s panTro5.chr2A 110007357 20 - 111504155 ACCCTCTTGTTTCAGGCACA i panTro5.chr2A T 45254 C 0 s panPan2.chr2A 1428348 20 + 114371477 ACCCTCTTGTTTCAGGCACA i panPan2.chr2A C 0 I 4 s gorGor5.CYUI01015607v1 1451868 20 + 1464242 ACCCTCTTGTTTCAGGCACA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175846 20 + 81552678 ACCCTCTTGTTTCAGGGACA i nomLeu3.chr19 C 0 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273036 0 - 7082604 C e cebCap1.NW_016107827v1 1366289 618 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535305 156 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472928 3 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I a score=-649.000000 s hg38.chr2_KI270774v1_alt 191976 2 + 223625 GG s panTro5.chr2A 110007377 2 - 111504155 GA i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1451888 2 + 1464242 CC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175866 1 + 81552678 -C i nomLeu3.chr19 C 0 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273036 0 - 7082604 C e cebCap1.NW_016107827v1 1366289 618 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535305 156 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472928 3 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I e panPan2.chr2A 1428368 4 + 114371477 I a score=-1400.000000 s hg38.chr2_KI270774v1_alt 191978 3 + 223625 -ATA s panTro5.chr2A 110007379 3 - 111504155 -ATA i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1451890 3 + 1464242 -CCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175867 3 + 81552678 -ACA i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1472925 3 - 111193037 CCC- i macFas5.chr13 T 3 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273036 0 - 7082604 C e cebCap1.NW_016107827v1 1366289 618 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454211 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535305 156 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I e panPan2.chr2A 1428368 4 + 114371477 I a score=2800.000000 s hg38.chr2_KI270774v1_alt 191981 1 + 223625 C s panTro5.chr2A 110007382 1 - 111504155 C i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1451893 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175870 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1472928 1 - 111193037 C i macFas5.chr13 C 0 C 0 s chlSab2.chr14 1535461 1 - 107702431 C i chlSab2.chr14 I 156 C 0 s colAng1.NW_012118821v1 1454211 1 - 13651311 C i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1273036 1 - 7082604 C i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e cebCap1.NW_016107827v1 1366289 618 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I e panPan2.chr2A 1428368 4 + 114371477 I a score=48947.000000 s hg38.chr2_KI270774v1_alt 191982 19 + 223625 CCTCCTGTGTCAGGCACAC s panTro5.chr2A 110007383 19 - 111504155 CCTCTTGTTTCAGGGATAC i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1451894 19 + 1464242 CCTCTTGTTTCAGGCACTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175871 19 + 81552678 CCTCTCGTTTCAGGCACAC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1472929 19 - 111193037 CCTCCTGTGTCAGGCACAC i macFas5.chr13 C 0 C 0 s chlSab2.chr14 1535462 19 - 107702431 CCTCCTGTGTCAGGCGCAC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1454212 19 - 13651311 CCTCCTGTGTCAGGCGCAT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1273037 19 - 7082604 CCTCCTGTGTCAGGCACAT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1366907 19 + 1864846 CCTTCTGTGTCAGGCATAC i cebCap1.NW_016107827v1 I 618 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I e panPan2.chr2A 1428368 4 + 114371477 I a score=23391.000000 s hg38.chr2_KI270774v1_alt 192001 7 + 223625 CCCACCC s panTro5.chr2A 110007402 7 - 111504155 CACAACC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1428372 7 + 114371477 CCCACCC i panPan2.chr2A I 4 C 0 s gorGor5.CYUI01015607v1 1451913 7 + 1464242 CCCACCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175890 7 + 81552678 CCCACCC i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1472948 7 - 111193037 CCCACCC i macFas5.chr13 C 0 C 0 s chlSab2.chr14 1535481 7 - 107702431 CCCACCA i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1454231 7 - 13651311 CCCACCC i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1273056 7 - 7082604 ACCACCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1366926 7 + 1864846 CCCACCC i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I a score=27736.000000 s hg38.chr2_KI270774v1_alt 192008 13 + 223625 TCTTCTTTCAGGC s panTro5.chr2A 110007409 13 - 111504155 TCTTGTTTCAGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1428379 13 + 114371477 TCTTGTTTCAGGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1451920 13 + 1464242 TCTTGTTTCAGGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175897 13 + 81552678 TCTTGTTTCAGGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1472955 13 - 111193037 TCTTGTTTCAGAC i macFas5.chr13 C 0 T 40 s chlSab2.chr14 1535488 13 - 107702431 TCCTCTGTCAGGC i chlSab2.chr14 C 0 C 0 s saiBol1.JH378218 1273063 13 - 7082604 CCCCATGTCAGGC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1366933 13 + 1864846 TCCTGTGTCAGGG i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454238 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I a score=15892.000000 s hg38.chr2_KI270774v1_alt 192021 7 + 223625 ACACCCC s panTro5.chr2A 110007422 7 - 111504155 ATACCCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1428392 7 + 114371477 ACACCCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1451933 7 + 1464242 ACACCCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175910 7 + 81552678 ACACCCC i nomLeu3.chr19 C 0 C 0 s chlSab2.chr14 1535501 7 - 107702431 ACACCCC i chlSab2.chr14 C 0 I 9 s saiBol1.JH378218 1273076 7 - 7082604 GGACCCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1366946 7 + 1864846 ACACCCC i cebCap1.NW_016107827v1 C 0 I 97 e aotNan1.NW_018513311v1 185363 186 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454238 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472968 40 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I a score=4888.000000 s hg38.chr2_KI270774v1_alt 192028 9 + 223625 ACCCTCTTG s panTro5.chr2A 110007429 9 - 111504155 ATCCTCTTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1428399 9 + 114371477 ACCATCTTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1451940 9 + 1464242 CACCCCCCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175917 9 + 81552678 ACCCTCTCA i nomLeu3.chr19 C 0 C 0 s saiBol1.JH378218 1273083 9 - 7082604 TCCCTCCTG i saiBol1.JH378218 C 0 I 11 e aotNan1.NW_018513311v1 185363 186 + 287728 I e cebCap1.NW_016107827v1 1366953 97 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454238 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535508 9 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472968 40 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I a score=910.000000 s hg38.chr2_KI270774v1_alt 192037 1 + 223625 T s panTro5.chr2A 110007438 1 - 111504155 T i panTro5.chr2A C 0 I 83 s panPan2.chr2A 1428408 1 + 114371477 T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1451949 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1175926 1 + 81552678 T i nomLeu3.chr19 C 0 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273092 11 - 7082604 I e cebCap1.NW_016107827v1 1366953 97 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454238 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535508 9 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472968 40 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I a score=-964.000000 s hg38.chr2_KI270774v1_alt 192038 36 + 223625 TTAG----GGCAAACCACACTCTCTGGTTTCAGGCACACC s panPan2.chr2A 1428409 1 + 114371477 T--------------------------------------- i panPan2.chr2A C 0 I 15 s gorGor5.CYUI01015607v1 1451950 36 + 1464242 ---GT-CAGGCACACCCCACCCTCTTGTTTCAGGCACACC i gorGor5.CYUI01015607v1 C 0 I 1 s nomLeu3.chr19 1175927 36 + 81552678 ----TTCAGGGACATCTCACCCTCTCGTTTCAGGGACACC i nomLeu3.chr19 C 0 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273092 11 - 7082604 I e cebCap1.NW_016107827v1 1366953 97 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454238 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535508 9 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472968 40 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I e panTro5.chr2A 110007439 83 - 111504155 I a score=-909.000000 s hg38.chr2_KI270774v1_alt 192074 2 + 223625 -CC s panTro5.chr2A 1500329 2 + 111504155 -CA i panTro5.chr2A I 165 C 0 s panPan2.chr2A 1428425 2 + 114371477 -CA i panPan2.chr2A I 15 C 0 s gorGor5.CYUI01015607v1 1451987 2 + 1464242 -CA i gorGor5.CYUI01015607v1 I 1 C 0 s nomLeu3.chr19 1175963 2 + 81552678 CC- i nomLeu3.chr19 C 0 I 168 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273092 11 - 7082604 I e cebCap1.NW_016107827v1 1366953 97 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454238 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535508 9 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472968 40 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I a score=4560.000000 s hg38.chr2_KI270774v1_alt 192076 8 + 223625 CCTTCTTC s panTro5.chr2A 1500331 8 + 111504155 CCCTCTTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1428427 8 + 114371477 CCCTTCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1451989 8 + 1464242 CCCTCTTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1176133 8 + 81552678 CCATCTTG i nomLeu3.chr19 I 168 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273092 11 - 7082604 I e cebCap1.NW_016107827v1 1366953 97 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454238 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535508 9 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472968 40 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I a score=33559.000000 s hg38.chr2_KI270774v1_alt 192084 37 + 223625 TGTCAGGCACAGCCCACCCTCTTGTTTCAGGGACACC s panTro5.chr2A 1500339 37 + 111504155 TTTCAGGCACACCCCACTCTCTTGTTTCAGGGACACC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1428435 37 + 114371477 TTTGAGGGACACCCCACCCTCTTGTTTGAGGGACACC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1451997 32 + 1464242 TTTCAGGCACACCCA---CCCTTGTTTCAGG--CACC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1176141 37 + 81552678 TTTCAGACACACCACACTCTCTTGTTTCAGGGACACC i nomLeu3.chr19 C 0 C 0 s cebCap1.NW_016107827v1 1367050 37 + 1864846 TGTCAGGCATACCCCACCCTCCTGTGTCAGGGACACC i cebCap1.NW_016107827v1 I 97 I 559 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273092 11 - 7082604 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454238 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535508 9 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472968 40 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I a score=15218.000000 s hg38.chr2_KI270774v1_alt 192121 42 + 223625 CCACCCCCTTCTTTCAGGGACACCCTACCCTTTTGTTTCAGG s panTro5.chr2A 1500376 24 + 111504155 ACACCCTCTTGTTTCAGGCACACC------------------ i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1428472 24 + 114371477 CCACCCTCTTGTTTGAGGGACACC------------------ i panPan2.chr2A C 0 T 316 s gorGor5.CYUI01015607v1 1452029 42 + 1464242 CCCACCTCTTGTTTCAGGCACACCCCACCCTCTTGTTTCAGG i gorGor5.CYUI01015607v1 C 0 I 14 s nomLeu3.chr19 1176178 42 + 81552678 CCACCCTCTCGTTTCAGGGACACCCCACCCTCTCGTTTCAGG i nomLeu3.chr19 C 0 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273092 11 - 7082604 I e cebCap1.NW_016107827v1 1367087 559 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454238 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535508 9 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472968 40 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I a score=648.000000 s hg38.chr2_KI270774v1_alt 192163 9 + 223625 GACACCGCA s nomLeu3.chr19 1176220 9 + 81552678 GACACCCCA i nomLeu3.chr19 C 0 I 1054 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273092 11 - 7082604 I e cebCap1.NW_016107827v1 1367087 559 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454238 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535508 9 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472968 40 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I e gorGor5.CYUI01015607v1 1452071 14 + 1464242 I e panPan2.chr2A 1428496 316 + 114371477 T e panTro5.chr2A 1500400 0 + 111504155 C a score=10132.000000 s hg38.chr2_KI270774v1_alt 192172 43 + 223625 CCTCTTATTTCAGGAACA------GGACACCCTCTTGTTTCAGGCACAC s panTro5.chr2A 1500400 23 + 111504155 --------------------------ACACCCTCTTGTTTCAGGCACAC i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1452085 49 + 1464242 CCTCTTGTTTCAGGCACACCCCCCGCACACCCCACTCTGTCAGGCACAC i gorGor5.CYUI01015607v1 I 14 I 1 s nomLeu3.chr19 1177283 43 + 81552678 CCTCTTGTCTCAGGCACA------CCACACTCTCTTGTTTCAGGCACAC i nomLeu3.chr19 I 1054 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273092 11 - 7082604 I e cebCap1.NW_016107827v1 1367087 559 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454238 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535508 9 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472968 40 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I e panPan2.chr2A 1428496 316 + 114371477 T a score=20588.000000 s hg38.chr2_KI270774v1_alt 192215 28 + 223625 ACACCCTCTTGCTTCAGGCACACCCCAC s panTro5.chr2A 1500423 27 + 111504155 AC-CCCTCTTGTTTCAGGCACACCCCAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1428180 28 + 114371477 ACACCCTCTTGTTTCCGGCACACCCCAC i panPan2.chr2A T 316 C 0 s gorGor5.CYUI01015607v1 1452135 27 + 1464242 CCACCCTCTTGTTTCAGG-ACACCCCAC i gorGor5.CYUI01015607v1 I 1 I 23 s nomLeu3.chr19 1177326 28 + 81552678 ACACCCTCTTGTTTCAGGCACACCCCAC i nomLeu3.chr19 C 0 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273092 11 - 7082604 I e cebCap1.NW_016107827v1 1367087 559 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454238 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535508 9 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472968 40 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I a score=16437.000000 s hg38.chr2_KI270774v1_alt 192243 37 + 223625 TCTCTTGTTTCTGGGAAACCACACCCTCTTGTTTCAG s panTro5.chr2A 1500450 37 + 111504155 CTTCCTGTTTCAGGGACACCACACCCTCTTGTTTCAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1428208 37 + 114371477 CCTCTTGTGTCAGGGACACCACACCCTCTTGTTTCAG i panPan2.chr2A C 0 C 0 s nomLeu3.chr19 1177354 37 + 81552678 CCTCTCATTTCAGGGACACCCCACCCTCTCGTTTCAG i nomLeu3.chr19 C 0 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273092 11 - 7082604 I e cebCap1.NW_016107827v1 1367087 559 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454238 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535508 9 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472968 40 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I e gorGor5.CYUI01015607v1 1452162 23 + 1464242 I a score=22920.000000 s hg38.chr2_KI270774v1_alt 192280 30 + 223625 GGACACCCCACCCTGTTGTTTCAGGCACAC s panTro5.chr2A 1500487 30 + 111504155 GGACACCACACCCTCTTGTTTCAGGCACAC i panTro5.chr2A C 0 T 93 s panPan2.chr2A 1428245 30 + 114371477 GGACACCACACCCTCTTGTTTCAGGGACAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1452185 29 + 1464242 GGACACCCCACCCTCTTGTTTCAGG-ACAC i gorGor5.CYUI01015607v1 I 23 C 0 s nomLeu3.chr19 1177391 30 + 81552678 GGACACCCCACCCTCTCGTTTCAGACACAC i nomLeu3.chr19 C 0 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273092 11 - 7082604 I e cebCap1.NW_016107827v1 1367087 559 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454238 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535508 9 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472968 40 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I a score=1480.000000 s hg38.chr2_KI270774v1_alt 192310 2 + 223625 CC s panTro5.chr2A 110007522 2 - 111504155 CC i panTro5.chr2A I 83 I 11 s panPan2.chr2A 1428275 1 + 114371477 -C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1452214 2 + 1464242 CC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1177421 2 + 81552678 CC i nomLeu3.chr19 C 0 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273092 11 - 7082604 I e cebCap1.NW_016107827v1 1367087 559 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454238 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535508 9 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472968 40 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I a score=-42.000000 s hg38.chr2_KI270774v1_alt 192312 1 + 223625 C s panTro5.chr2A 1500424 1 + 111504155 C i panTro5.chr2A T 93 C 0 s gorGor5.CYUI01015607v1 1452216 1 + 1464242 A i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1177423 1 + 81552678 C i nomLeu3.chr19 C 0 I 1307 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273092 11 - 7082604 I e cebCap1.NW_016107827v1 1367087 559 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454238 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535508 9 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472968 40 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I e panPan2.chr2A 1428276 0 + 114371477 C a score=2955.000000 s hg38.chr2_KI270774v1_alt 192313 24 + 223625 CCCTCTTCTTTCA-GGCACAGGATA s panTro5.chr2A 1500425 24 + 111504155 CCCTCTTGTTTCA-GGCACACCCCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1428276 3 + 114371477 ----------------------ACA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1452217 25 + 1464242 CCCTCTTGTTTCAGGGCACTCCCCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1178731 23 + 81552678 CCCTCTTGTTTCA-GGGACAT-GCA i nomLeu3.chr19 I 1307 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273092 11 - 7082604 I e cebCap1.NW_016107827v1 1367087 559 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454238 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535508 9 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e macFas5.chr13 1472968 40 - 111193037 T e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I a score=9908.000000 s hg38.chr2_KI270774v1_alt 192337 10 + 223625 CCCTCTCGTT s panTro5.chr2A 1500449 10 + 111504155 CCTTCCTGTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1428279 10 + 114371477 CCCTCTTGTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1452242 10 + 1464242 CCCTCTGGTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1178754 10 + 81552678 CCCTCTCGTT i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1472928 10 - 111193037 CCCTCCTGTG i macFas5.chr13 T 40 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273092 11 - 7082604 I e cebCap1.NW_016107827v1 1367087 559 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454238 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e chlSab2.chr14 1535508 9 - 107702431 I e cerAty1.NW_012000820v1 1454943 1267 - 10304083 I e macNem1.NW_012011978v1 1501207 0 + 3644372 C e rheMac8.chrUn_NW_015079380v1 3523 142 - 11509 I a score=23915.000000 s hg38.chr2_KI270774v1_alt 192347 12 + 223625 TCAGGGACA---------------------------CCA s panTro5.chr2A 1500459 12 + 111504155 TCAGGGACA---------------------------CCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1428289 12 + 114371477 TCAGGGACA---------------------------CCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1452252 39 + 1464242 TCAGGGACACTcccccccctccccccccccccccccccc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1178764 12 + 81552678 TCAGGGACA---------------------------CCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 3665 12 - 11509 TCAGGCACA---------------------------CCC i rheMac8.chrUn_NW_015079380v1 I 142 C 0 s macFas5.chr13 1472938 12 - 111193037 TCAGGCACA---------------------------CCC i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1456210 12 - 10304083 TCAGGCACA---------------------------CCC i cerAty1.NW_012000820v1 I 1267 C 0 s chlSab2.chr14 1535517 12 - 107702431 TCAGGCACA---------------------------CCT i chlSab2.chr14 I 9 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273092 11 - 7082604 I e cebCap1.NW_016107827v1 1367087 559 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454238 0 - 13651311 C e manLeu1.NW_012103754v1 1027882 0 - 2200435 C e macNem1.NW_012011978v1 1501207 0 + 3644372 C a score=38415.000000 s hg38.chr2_KI270774v1_alt 192359 8 + 223625 CACCCTCT s panTro5.chr2A 1500471 8 + 111504155 CACCCTCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1428301 8 + 114371477 CACCCTCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1452291 8 + 1464242 cccccGCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1178776 8 + 81552678 CACCCTCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 3677 8 - 11509 CACCCTCT i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1472950 8 - 111193037 CACCCTCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1501207 8 + 3644372 CACCCTCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1456222 8 - 10304083 CACCCTCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1535529 8 - 107702431 CACCCTCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1027882 8 - 2200435 CACCCTCT i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273092 11 - 7082604 I e cebCap1.NW_016107827v1 1367087 559 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e colAng1.NW_012118821v1 1454238 0 - 13651311 C a score=3751.000000 s hg38.chr2_KI270774v1_alt 192367 1 + 223625 T s panTro5.chr2A 1500479 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1428309 1 + 114371477 T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1452299 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1178784 1 + 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 3685 1 - 11509 T i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1472958 1 - 111193037 T i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1501215 1 + 3644372 T i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1456230 1 - 10304083 T i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1535537 1 - 107702431 T i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1027890 1 - 2200435 T i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1454238 1 - 13651311 T i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273092 11 - 7082604 I e cebCap1.NW_016107827v1 1367087 559 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1798253 2955 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C a score=21996.000000 s hg38.chr2_KI270774v1_alt 192368 3 + 223625 GTT s panTro5.chr2A 1500480 3 + 111504155 GTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1428310 3 + 114371477 GTT i panPan2.chr2A C 0 I 195 s gorGor5.CYUI01015607v1 1452300 3 + 1464242 GTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1178785 3 + 81552678 GTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 3686 3 - 11509 GTT i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1472959 3 - 111193037 GTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1501216 3 + 3644372 GTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1456231 3 - 10304083 GTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1535538 3 - 107702431 GTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1027891 3 - 2200435 GTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1454239 3 - 13651311 GTT i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1801208 3 + 4416731 GTT i dasNov3.JH576208 I 2955 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273092 11 - 7082604 I e cebCap1.NW_016107827v1 1367087 559 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e calJac3.chr14 1443884 0 - 108792865 C a score=14881.000000 s hg38.chr2_KI270774v1_alt 192371 5 + 223625 ---TCAGG s panTro5.chr2A 1500483 5 + 111504155 ---TCAGG i panTro5.chr2A C 0 I 13442 s gorGor5.CYUI01015607v1 1452303 5 + 1464242 ---TCAGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1178788 5 + 81552678 ---TCAGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 3689 5 - 11509 ---TCAGA i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1472962 5 - 111193037 ---TCAGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1501219 5 + 3644372 ---TCAGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1456234 5 - 10304083 ---TCGGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1535541 5 - 107702431 ---TCAGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1027894 5 - 2200435 ---TCGGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1454242 5 - 13651311 ---TCAGG i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1801211 5 + 4416731 TCCTT--- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273092 11 - 7082604 I e cebCap1.NW_016107827v1 1367087 559 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e calJac3.chr14 1443884 0 - 108792865 C e panPan2.chr2A 1428313 195 + 114371477 I a score=2034867.000000 s hg38.chr2_KI270774v1_alt 192376 506 + 223625 TGTCCTCTCTCTGCACAGCATTTCCCC----CTCACACTCATTGTTTTATCAGCCTCTGGTTTTATTCATGTTTTTTCTCCATATGAAATAGTATCCTCTCTTCCTTTCAAACCAGAGCACTCTCAATCATGGAAAATTA---GAAACAGCAGCTCTTGCATTCAGATTTTTAAATAAAATGTTTAAA-TCAATGGTTCAGATGTGAATTGCAAAGGTAGCCAGGTAGCGAAGCTGC-CACATTCACAGAGAGGAGCTCA--GCTGCTTTCCGCA-TTATTATTACAAACCTAAGAAAGCGGATTCAGAACCCTGCTCAGGTGAAGGCAGTGGGGCATTTACGTCAAGACTGCAGTTTTGCTG-GACTACAG-CCCAGAAGCACTTGCTGTATTTTTGATAATATCT------AACCCTGTCAGATGGCTCCATGGGGCCCCAGGAAACACTTCTACTGCTGTACTCCAGCT-GAAG---CCACCACCCTCCATC--------CCTCCCAATGTTTTCTTCTGGACTCACCCACAGAA s gorGor5.CYUI01015607v1 1452308 503 + 1464242 CGTCCTCTCTCTGCACAGCATTTCCCC----CTCACACTCATTGTTTTATCAGCCTCTGGTTTTATTCATGTTTTTTCTCCATATGAAATCGTATCCTCTCTTCCTTTCAAACCAGACCACTCTCAGTCATGGAAAACTA---GAAACAGCAGCTCTTGCATTCAGGCTTTTAAATAAAATGTTTAAA-TCAATGGTTCAGATGTGAATTGCAAAGGTAGCCAGGTGGCCAAGCTGC-CACGTTCACAGAGATGAGCTCA--GCTGCTTTCCGCA-TTATTATTACAAACCCAAGAAAGTGGATTCAGAACCCTGCTCAGGTGAAGCCGGTGGGGCATTTACGTCAAGACTGCAATTTTGCTG-GACTACAG-CCCAGAAGCACTTGCTGTATTTTTGGTAATATCT------AACCCCGTCAGATGGCTCCATCGGGCCCCAGGAAGCACTTCTA---CTGTCCTCCAGCT-GAAG---CCACCACCTTCCATC--------CCTCCCAGTGTTTTCTTCTGGACTCACCCACAGAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1178793 509 + 81552678 CGTCCTCTCTCTGCACAGCATTTCCCC----CTCACACTCATGGTTTTATCAGCCTCTGGTTTTATTCATGCTTTTTCTGCATATGAAATCGTATCATCTCTTCCTTTCAAACCAGACCACTCTCAATCATGGAAAACTA---GAAACAGCAGCTCTTGCATTCAGGTTTTTAAATAAAATGTTTAAATTCAATGGTTCGGATGTGAATTGCCAAGGTAGCCAGGTGGCGAAGCTGC-CATGTTTACAGAGAGGAGCTCA--GCTGCTTTCCGCA-TTATTATTACAAACC-AAGAAAGCGGATTCAGAACACTGCTCAGGTGAAGGCAGTGGGGCATTTATGTCAAGACTGCAATTTTGCTG-GACTACAG-CCCAGAAGCACTTGCTGTATTTTTGGTAATATCT------CACCCCATCAGACGGCTCCATGAGGACACAGAAAACACTTCTACTGCTGTCCTCCGGCT-GAAGTCACCACCACCCTTAGTC--------CCTCCCAGTGCTTTCTTCTGGACTCACCCACAGAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 3694 506 - 11509 CGTCCTCTCTCTGCACAGCATTCCCCC----CTTATACTCATTGTTTTATCAGCCTCTGGTTTTATTCATGTTTTTTCTCCATATGAAATCATATCTTCTCTTCATTTCAAACCAGACCACTCTCAGTCATGGAAAACTA---GAAACAGCAGCTCTTGCATTCAGGTTTTTAAATAAAATGTTTAAA-TCAACGGTTCAGATGTGAATTGCAAAGGTAGCCAGGTGGCGAAGCTGC-CACGTTCACAGAGAGGAGCTCA--GCTGCTTTCCGCA-TTGTTATTATAAACCCACGAAAGCCGATTCAGAACCCTGCTCAGGTGAAGCCGGTGGGACATTTACATCACCATTGCAGTTTTGCTG-CACTGCAG-CTCAGAAGCACTTGCTGTATTCTTGGTAATATCT------CACTCCGTCAGATGGCTCCGTGGGGCCCCAGAAAACACTTCTACTGCTGTCCTCCAGCT-GAAG---CCACCACCCTCCGTC--------CCTCCCAGTGTTTTCTTCTGGACTCACCCACAGAA i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1472967 506 - 111193037 CGTCCTCTCTCTGCACAGCATTACCCC----CTTATACTCATTGTTTTATCAGCCTCTGGTTTTATTCATGTTTTTTCTCCATATGAAATCATATCTTCTCTTCATTTCAAACCAGACCACTCTCAGTCATGGAAAACTA---GAAACAGCAGCTCTTGCATTCAGGTTTTTAAATAAAATGTTTAAA-TCAACGGTTCAGATGTGAATTGCAAAGGTAGCCAGGTGGCGAAGCTGC-CACGTTCACAGAGAGGAGCTCA--GCTGCTTTCCGCA-TTGTTATTATAAACCCACGAAAGCCGATTCAGAACCCTGCTCAGGTGAAGCCGGTGGGACATTTACATCACGATTGCAGTTTTGCTG-CACTGCAG-CCCAGAAGCACTTGCTGTATTCTTGGTAATATCT------CACTCCGTCAGATGGCTCCGTGGGGCCCCAGAAAACACTTCTACTGCTGTCCTCCAGCT-GAAG---CCACCACCCTCCGTC--------CCTCCCAGTGTTTTCTTCTGGACTCACCCACAGAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1501224 505 + 3644372 TGTCCTCTCTCTGCACAGCATTCCCCC----CTTATACTCATTGTTTTATCAGCCTCTGGTTTTATTCATGTTTTTTCTCCATATGAAATCATATCTTCTCTTCATTTCAAACCAGACCACTCTCAGTCATGGAAAACTA---GAAACAGCAGCTCTTGCATTCAGGTTTTTAAATAAAATGTTTAAA-TCAACGGTTCAGATGTGAATTGCAAAGGTAGCCAGGTGGCGAAGCTGC-CACGTTCACAGAGAGGAGCTCA--GCTGCTTTCCGCA-TTGTTATTATAAACCCACGAAAGCCGATTCAGAACCCTGCTCAGGTGAAGCCGGTGGGACATTTACATCACGATTGCAGTTTTGCTG-CACTGCAG-CCCAGAAGCACTTGCTGTATTCTTGGTAATATCT------CACTCCGTCAGATGGCTCCGTGGGGCCCCAGAAAACACTTCTACTGCCGTCCTCCAGCT-GAAG---CCACCACCCTCCGTC--------CC-CCCAGTGTTTTCTTCTGGACTCACCCACAGAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1456239 506 - 10304083 CGTCCTCTCTCTGCACAGCATTACCCC----CTCATACTCATTGTTGTATCAGCCTCTGGTTTTATTCATGTGTTTTCTCCATATGAAATCATATCTTCTCTTCATTTCAAACCAGACCACTCTCAGTCATGGAAAACTA---GAAACAGCAGCTCTTGCATTCAGGTTTTTAAATAAAATGTTTAAA-TCAACGGTTCAGATGTGAATTGCAAAGGTAGCCAGGTGGCGAAGCTGC-CACGTTCACAGAGAGGAGCTCA--GCTGCTTTCTGCA-TTGTTATTATAAACCCACGAAAGCCGATTCAGAACCCTGCTCAGGTGAAGCCGGTGGGACATTTACATCAAGATGGCAGTTTTGCTG-CACTGCAG-CCCAGAAGCACTTGCTGTATTCTTGGTAATATCT------CACTCCGTCAGATGGCTCCGTGGGGCCCCAGAAAACACTTCTACTGCTGTCCTCCAGCT-GAAG---CCACCACCCTCCGTC--------CCTCCCAGTGTTTTCTTCTGGACTCACCCACAGAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1535546 504 - 107702431 TGTCCTTTCTCTGCACAGCATTTCCCC----CTCATACTCATTGTTTTATCAGCCTCTGGTTTTATTCATGTTTTTTCTCCATATGAAATCGTATCTTCTCTTCATTTCAAACCAGACCACTCTCAGTCATGGAAAACTA---GAAACAGCAGCTCTTGCATTCAAGTTTTTAAATAAAATGTTTAAA-TCAACGGTTCAGATGTGAATTGCAAAGGTAGCCAGGTGACGAAGCTGC-CACGTTCACAGAGAGGAGCTCA--GCTGCTTTCTGCA-TTATTATTATAAACCCACGAAAGCCGATTCAGAACCCTGCTCAGGCGAAGCTGGTGGGACATTTACATCAAGATTGCAGTTTTCCTG-CACTGAAG-CCCAGAAACACTTGCTGTATTCTTGGTAATATCT------CACCCCATCAGATGGCTCCGTGGGGCCCCGGAAAACAC--CTACTGCTGTCCTCCAGCT-GAAG---CCACCAGCCTCCGTC--------CCTCCCAGTGTTTTCTTCTGGACTCACCCACAGAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1027899 505 - 2200435 TGTCCGCTCTCTGCACAGCATTCCCCC----CTCACACTCATTGTTTTATCAGCCTCTGGTTTTATTCATATTTTTTCTCCATATGAAATCATAGCTTCTCTTCATTTCAAACCAGACCACTCTCAGTCATGGAAAACTA---GAAACAGCAGTTCTTGCATTCAGGTTTTAAAATAAAATGTTTAAA-TCAACGGTTCAGATGTGAATTGCAAAGGTAGCCAGGTGGCGAAGCTGC-CACGTTCACAGAGAGGAGCTCA--GCTGCTTTCCGCA-TTGTTATTATAAACCCACGAAAGCCGATTCAGAACCCTGCTCAGGTGAAGCCGGTGGGACATTTACATCAAGATTGCAGTTTTGCTG-CACTGCAG-CCCAGAAGCACTTGCTGTATTCTTGGTAATATCT------CACTCCGTCAGATGGCTCCGTGGGGCCCCAGAAAACACTTCTACTGCTGTCCTCCAGCT-GAAG---CCACCACCCTCCA-C--------CCTCCCAGTGTTTTCTTCTGGACTCACCCACAGAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1454247 486 - 13651311 CGTCCTCTCTCTGCACAGCATTTCCCC----CTCATACTCATTGTTATATCAGCCTCTGGTTTTATTCATGTTTTTTCTCCATGTGAAATCATATCTTCTCTTCATTTCAAACCAGACCACTCTCAGTCATGGAAAACTA---GAAACAGCAGCTCTTGCATTCAGGTTTTTCAATAAAATGTTTAAA-TCAACAGTTCAGATGTGAACTGCAAAGGTAGCCAGGTGGCAAAGCTGC-CATGTTCACAGA---GAGCTCA--GCTGCTTTCCGCA-TGATTATTATAAACCCACGCAAGCCGATTCAGAACCCTGCTCAGGTGAAGCTGGTGGGACATTCATATCACGATTGCAGTTTTGCTG-CACTGCAG-CCCAGAAGCACTTGCTGTATTCTTGGTAACATCT------CACCCCGTCAGATGGCTCCGTGGGGCCCCAGAAAACAC--CTACTGCTG-------------------CAGCACCCTCCGTC--------CCTCCCAGTGTTTTCTTCTGGACTCACCCACAGAA i colAng1.NW_012118821v1 C 0 C 0 s dasNov3.JH576208 1801216 520 + 4416731 TGTTCCCTCTCTGTA-AGTATTTTCTCCTTTCTCAAGCCTATTGTTTTATCAGCCCCTAGTCTGATTCACAGTTTTGCTCTATTTGAACATTTGAAGTCTCTTTATTGGAAACCAGACTACTCCTGATTATAGAAAACTACAGAAAACTGCAGACCTTGAAGTCATATATTT------AATGTCTAAA-ATAACCATTCAAATGCAAATTGGCCAGGTAGCCAGTTGGCAATGCTACAAACATTTACAGAAGGAAATTCAGGGCAGC-TTCTGCATTTATCATTATAAAGCTAACAAAGTCCATTCAGAAACCTCCCAAGGTGGACCAGGTAGGACATTAACATCTGCGTTCTACTTTTGCTATCACAATAGTCCCAGAAATGTT-----TATTTTTAAAAATATTTCTGTAACATTCTATGACATGACTCTAAGAAGCCCCAGAAAA-ACTTTCATTACTACTATTGGACTAAAAG---TCATTATTTCCTTTCTGCTTCCTCTCCCCAGTGTTCTGCTCAGGTTTCAGCTATAGGA i dasNov3.JH576208 C 0 I 639 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273092 11 - 7082604 I e cebCap1.NW_016107827v1 1367087 559 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e calJac3.chr14 1443884 0 - 108792865 C e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=232175.000000 s hg38.chr2_KI270774v1_alt 192882 89 + 223625 AGAAGGAGAAAGGAGTCCCAGTGGAGGTCAGGAACAGCCCTGGGAGAGCACCCAGAGATGAATTCGTGCCTAAGAGGGCTCACCCACTA s gorGor5.CYUI01015607v1 1452811 88 + 1464242 GGAAGGAGAAAGGAGGCCCAGTGAAGGTCAGGAACAGCCC-AGGAGAGCACCCAGAGATGAATTCGTGCCTAAGAGGGCTCACCCACTA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1179302 89 + 81552678 GGAAGGAGAAAGGAGGCCCAGTGGAGGTCAGGAACAGCCCTGGGAGAGCACCCAGAGATGAATTCATGCCTAAGACGGCTTGCCCACTA i nomLeu3.chr19 C 0 I 18062 s rheMac8.chrUn_NW_015079380v1 4200 87 - 11509 GGATGGAGAAAGGAGGCCCAGTGGAAGTCAGGAACAGCCCTGGGAGAGCA--CAGAGATGAATTTGTGCCTAAGAGGGCTCACCCACTA i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1473473 86 - 111193037 GGATGGAGAAAGGA-GCCCAGTGGAAGTCAGGAACAGCCCTGGGAGAGCA--CAGAGATGAATTTGTGCCTAAGAGGGCTCACCCACTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1501729 87 + 3644372 GGATGGAGAAAGGAGGCCCAGTGGAAGTCAGGAACAGCCCTGGGAGAGCA--CAGAGATGAATTTGTGCCTAAGAGGGCTCACCCACTA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1456745 87 - 10304083 GGATGGAGAAAGGAGGCCCAGTGGAAGTCAGGAACAGCCCTGGGAGAGCA--CAGAGATGAATTTGTGCCTAAGAGGGCTCACCCACTA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1536050 42 - 107702431 GGATGGAGAAAGGAGGCCCAGTGGAGGTCAGGAACAGCCCTG----------------------------------------------- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1028404 87 - 2200435 GGATGGAGAAAGGAGGCCCAGTGGAAGTCAGGAACAGCCCTGGGAGAGCA--CAGAGATGAATTTGTGCCTAAGAGGGCTCACCCACTA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1454733 42 - 13651311 GGATGGAGAAGGGAGGCCCAGTGGAGGCCAGGAGCAGCCCTG----------------------------------------------- i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273092 11 - 7082604 I e cebCap1.NW_016107827v1 1367087 559 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=63304.000000 s hg38.chr2_KI270774v1_alt 192971 28 + 223625 CGTCTCTTCCTCCTCCCGGAGAGCACCC s gorGor5.CYUI01015607v1 1452899 28 + 1464242 CCTCTCTTCCTCCTCCCGGAGAGCACCC i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 4287 28 - 11509 CCTCTCTTCCTCTTCCCGGAGAGCACCC i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1473559 28 - 111193037 CCTCTCTTCCTCTTCCCGGAGAGCACCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1501816 28 + 3644372 CCTCTCTTCCTCTTCCCGGAGAGCACCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1456832 28 - 10304083 CCTCTCTTCCTCTTCCCGGAGAGCACCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1536092 11 - 107702431 -----------------GGAGAGCACCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1028491 28 - 2200435 CCTCTCTTCCTCTTCCCGGAGAGCACCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1454775 11 - 13651311 -----------------GGAGAGCACCC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273092 11 - 7082604 I e cebCap1.NW_016107827v1 1367087 559 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e nomLeu3.chr19 1179391 18062 + 81552678 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=45185.000000 s hg38.chr2_KI270774v1_alt 192999 15 + 223625 AAAGATGTGTTGGTG s gorGor5.CYUI01015607v1 1452927 15 + 1464242 AAAGATGCGTTTGTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1197453 15 + 81552678 AGAGATGAATTCATG i nomLeu3.chr19 I 18062 C 0 s rheMac8.chrUn_NW_015079380v1 4315 15 - 11509 AGAGATGAAGTCGTG i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1473587 15 - 111193037 AGAGATGAAGTCGTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1501844 15 + 3644372 AGAGATGAAGTCGTG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1456860 15 - 10304083 AGAGATGAATTCGTG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1536103 15 - 107702431 AGAGATGAATTCGTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1028519 15 - 2200435 AGAGATGAATTCGTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1454786 15 - 13651311 AGAGAGGAATTTGTG i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273092 11 - 7082604 I e cebCap1.NW_016107827v1 1367087 559 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e calJac3.chr14 1443884 0 - 108792865 C e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=88649.000000 s hg38.chr2_KI270774v1_alt 193014 22 + 223625 CCTAAGAGAACTTGCCCACTAC s gorGor5.CYUI01015607v1 1452942 21 + 1464242 CCTAAGAGAAC-TGCCCACTAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1197468 22 + 81552678 CCTAAGAGGGCTCGCCCACTAC i nomLeu3.chr19 C 0 T 18099 s rheMac8.chrUn_NW_015079380v1 4330 22 - 11509 CCTAAGAGAACTTGCACACCAC i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1473602 22 - 111193037 CCTAAGAGAACTTGCACACCAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1501859 22 + 3644372 CCTAAGAGAACTTGCACACCAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1456875 22 - 10304083 CCTAAGAGAACTTGCACACCAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1536118 22 - 107702431 CCTGAGAGAACTTGCACACCAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1028534 22 - 2200435 CCTAAGAGAATTTGCACACCAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1454801 22 - 13651311 CCTGAGAGAACTTGCACACCAC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1443884 22 - 108792865 CCTGAGATGACTTACCCACTAC i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273092 11 - 7082604 I e cebCap1.NW_016107827v1 1367087 559 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=30091.000000 s hg38.chr2_KI270774v1_alt 193036 7 + 223625 CTCTCTT s gorGor5.CYUI01015607v1 1452963 7 + 1464242 CTCTCTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1179391 7 + 81552678 CCCCCTT i nomLeu3.chr19 T 18099 C 0 s rheMac8.chrUn_NW_015079380v1 4352 7 - 11509 CTCTCTT i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1473624 7 - 111193037 CTCTCGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1501881 7 + 3644372 CTCTCTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1456897 7 - 10304083 CTCTCTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1536140 7 - 107702431 CTCTCTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1028556 7 - 2200435 CTCTCTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1454823 7 - 13651311 CTCTCTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1443906 7 - 108792865 CGCTCTT i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e saiBol1.JH378218 1273092 11 - 7082604 I e cebCap1.NW_016107827v1 1367087 559 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=238692.000000 s hg38.chr2_KI270774v1_alt 193043 52 + 223625 CCTCCTGGGCCCCCTTTGAATGCCTGCACCGTGACCGGGGCCAGGAGCACAT s gorGor5.CYUI01015607v1 1452970 51 + 1464242 CCTCCTGGA-CCCCTTTGAATGCCTGCACCGTGACCGGGGCCAGCAGCACAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1179398 52 + 81552678 CCTCCTGGGCCCCCTTTGAACGCCTGCACCGTGACTGGGGCCAGCAGCACAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 4359 52 - 11509 CCTCCTGGGCCCCCTTTGAACACCTGCACCATGACTGGGGCCAGCAGCACAT i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1473631 52 - 111193037 CCTCCTGGGCCCCCTTTGAACACCTGCACCATGACTGGGGCCAGCAGCACAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1501888 52 + 3644372 CCTCCTGGGCCCCCTTTGAACACCTGCACCATGACTGGGGCCAGCAGCACAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1456904 52 - 10304083 CCTCCTGGGCCCCCTTTGAACACCTGCACCATGACTGGGGCCAGCAGCACAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1536147 52 - 107702431 CCTCCTGGGCCCCCTTTGAACACCTGCACCATGACTGGGGCCAGCAGCACAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1028563 52 - 2200435 CCTCCTGGGCCCCCTTTGAACACCTGCACCATGACTGGGGCCAGCAGCACAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1454830 52 - 13651311 CCTCCTGGGCCCCCTTCGAACACCTGCACCATGACCGGGGCCAGCAGCACAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1443913 47 - 108792865 CCTCCCGGA---CCTCTGAACATCTGTACC--GGCCTGAGCCAGAAGCACCG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1273103 40 - 7082604 CCTCCCGGA--CCCTCTGAACGCCTGCACC--AGCCTGAGCCAG-------- i saiBol1.JH378218 I 11 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e cebCap1.NW_016107827v1 1367087 559 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=510472.000000 s hg38.chr2_KI270774v1_alt 193095 89 + 223625 GAGCCTAAGACCATTCTGTGCACCAGGGCCCATGTCTGAGAGATTAATACACAGGTGCCCAGGGCTTCTCCTGTCTCCGTGGTGATTTA s gorGor5.CYUI01015607v1 1453021 89 + 1464242 GAGCCTAAGACCATTCTGTGCACCAGGGCCCACGTCTGAGAGATTAATACACAGGTGCCCAGGGCTTCTCCTGTCTCCATGGTGACTta i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1179450 89 + 81552678 GAGCCTAAGACCATTCTGTGCACCAGGGCCCATGTCTGAGAGATTAATACACAGGTGCCCAGGGCTTCTCCTGTCTCCACGGTGACTta i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 4411 89 - 11509 GAGCCTAAGACCATTTTGTGCACCAGGGCCCAGGTCTGAGAGATTAATATGCAGGTGCTCAGGGCTTCTTCTGTCTCCACGGTGACTta i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1473683 89 - 111193037 GAGCCTAAGACCATTTTGTGCACCAGGGCCCAGGTCTGAGAGATTAATATGCAGGTGCTCAGGGCTGCTTCTGTCTCCACGGTGACTta i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1501940 89 + 3644372 GAGCCTAAGACCATTTTGTGCACCAGGGCCCAGGTCTGAGAGATTAATATGCAGGTGCTCAGGGCTTCTTCTGTCTCCACGGTGACTta i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1456956 89 - 10304083 GAGCCTAAGACCATTTTGTGCACCAGGGCCCAGGTCTGAGAGATTAATATGCAGGTGCTCAGGGCTTCTCCTGTCTCCACAGTGACTta i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1536199 89 - 107702431 GAGCCTAAGACCATTTTGTGCACCAGGGCCCAGGTCTGAGAGATTAATATGCAGGTGCTCAGGGCTTCTCCTGTCTCCACAGTGACTta i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1028615 89 - 2200435 GAGCCTAAGACCATTTTGTGCACCAGGGCCCAGGTCTGAGAGATTAATATGCAGGTGCTCAGGGCTTCTCTTGTCTCCACGGTGACTta i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1454882 89 - 13651311 GAGCCTAAGACCATTTTGTGCACCAGGGCCCAGATCTGAGAGATTAATATGCAGGTGCTCAGGGCTTCTCCTGTCTCCACGGTGACTta i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1443960 86 - 108792865 GAGCCCAGGATCATGTTGCGCACCAGGGCCCACGTCTGAGACATGAATACACAGG-GCCCAGGACTGCT--TGTCTCCACCGAGACTTA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1273143 80 - 7082604 -----TAAGATCATGTTGTGCACCA-GGCCCACGTCTGAGGGATGAATACACAGG-GCCCAGGGCTGCT--TGTCTCCACCGAGACTCA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1367646 85 + 1864846 GAGCCCAAGATCATGTTGTGCACCA-GGCCTATGTCTGAGAGGTGAATACACAGG-GCCTAGGGCTGCT--TGTCTCCACCGAGACTCA i cebCap1.NW_016107827v1 I 559 C 0 e aotNan1.NW_018513311v1 185363 186 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=277814.000000 s hg38.chr2_KI270774v1_alt 193184 42 + 223625 CAGACTTAGATTTA------------GATACAGATATTGATTATGGATAGAGAC s gorGor5.CYUI01015607v1 1453110 36 + 1464242 cagac------tta------------tatatagatattgattatggatagagac i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1179539 54 + 81552678 cagacttagatttagatatagatatggatatagatattgattatggatagagac i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 4500 54 - 11509 cagacttagatttagatacaggtgtgcatatagatactgattatggatatagac i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1473772 54 - 111193037 cagacttagatttagatacaggtgtgcatatagatattgattatggatatagac i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1502029 54 + 3644372 cagacttagatttagatacaggtgtgcatatagatattgattatggatatagac i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1457045 54 - 10304083 cagacttagatttagatacaggtgtgcatatagatattgattatggatatagac i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1536288 54 - 107702431 cagacttagatttagatacaggtgtgcatatagatattgattatggatatagac i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1028704 54 - 2200435 cagacttagatttagatacaggtgtgcatatagatattgattatggatatagac i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1454971 54 - 13651311 cagacttagatttagatacaggtgtgcatatggatattgattatggagatagac i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1444046 42 - 108792865 CAGACTTAAATGTA------------GATATCGGTACCGATTATGGATAGAGAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1273223 42 - 7082604 CAGACTTAGATTTA------------GATATCCATACTGATCATGGATAGAGAC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1367731 42 + 1864846 CAGACTTAGATTTA------------GATATCAATACTGATTATGGATAGAGAC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 185549 42 + 287728 CAGACTTAGATTTA------------GACATCGATACTGATTATGGGTAGAGAC i aotNan1.NW_018513311v1 I 186 I 377 e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=-9432.000000 s hg38.chr2_KI270774v1_alt 193226 1 + 223625 -A s gorGor5.CYUI01015607v1 1453146 1 + 1464242 -a i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1179593 1 + 81552678 -a i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 4554 1 - 11509 -a i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1473826 1 - 111193037 -a i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1502083 1 + 3644372 -a i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1457099 1 - 10304083 -a i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1536342 1 - 107702431 -a i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1028758 1 - 2200435 -a i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1455025 1 - 13651311 -a i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1444088 1 - 108792865 T- i calJac3.chr14 C 0 I 2 s saiBol1.JH378218 1273265 1 - 7082604 T- i saiBol1.JH378218 C 0 I 4 s cebCap1.NW_016107827v1 1367773 1 + 1864846 T- i cebCap1.NW_016107827v1 C 0 I 2 e aotNan1.NW_018513311v1 185591 377 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=1826.000000 s hg38.chr2_KI270774v1_alt 193227 1 + 223625 G s gorGor5.CYUI01015607v1 1453147 1 + 1464242 g i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1179594 1 + 81552678 g i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 4555 1 - 11509 a i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1473827 1 - 111193037 a i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1502084 1 + 3644372 a i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1457100 1 - 10304083 a i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1536343 1 - 107702431 a i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1028759 1 - 2200435 a i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1455026 1 - 13651311 a i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1444091 1 - 108792865 G i calJac3.chr14 I 2 I 1 s cebCap1.NW_016107827v1 1367776 1 + 1864846 G i cebCap1.NW_016107827v1 I 2 I 1 e aotNan1.NW_018513311v1 185591 377 + 287728 I e saiBol1.JH378218 1273266 4 - 7082604 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=154322.000000 s hg38.chr2_KI270774v1_alt 193228 36 + 223625 TT-TAGATATAGGCACAGATGCAGATATATAGATATA s gorGor5.CYUI01015607v1 1453148 36 + 1464242 tt-tagatataggcacagatgcagatacatagatata i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1179595 36 + 81552678 tt-tcgatataggcacaaatgcagttatatagatata i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 4556 31 - 11509 ttgtagatataggtacagatgcagat------atata i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1473828 31 - 111193037 ttgtagatataggtacagatgcagat------atata i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1502085 31 + 3644372 ttgtagatataggtacagatgcagat------atata i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1457101 31 - 10304083 ttgtagatataggtacagatgcagat------atata i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1536344 37 - 107702431 ttgtagatataggtacagatgcagatatatagatata i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1028760 31 - 2200435 ttgtagatataggtacagatgcagat------atata i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1455027 37 - 13651311 ttgtagatataggtacagatgcagatacatagatata i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1444093 36 - 108792865 TT-CACATACAGGAACAGATGTAGATACATGGATACA i calJac3.chr14 I 1 C 0 s saiBol1.JH378218 1273270 36 - 7082604 TT-CTGATCCAGGAACAGATGCAGATATATATATACA i saiBol1.JH378218 I 4 C 0 s cebCap1.NW_016107827v1 1367778 36 + 1864846 TT-CAGATCCAGGAACAGATGCAGATATATAGATATA i cebCap1.NW_016107827v1 I 1 I 214 e aotNan1.NW_018513311v1 185591 377 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=43281.000000 s hg38.chr2_KI270774v1_alt 193264 15 + 223625 GATATAAATTTACAT s gorGor5.CYUI01015607v1 1453184 15 + 1464242 gatatacatttacat i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1179631 15 + 81552678 gatataaatttacat i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 4587 15 - 11509 gatataaattcacct i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1473859 15 - 111193037 gatataaattcacct i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1502116 15 + 3644372 gatataaattcacct i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1457132 15 - 10304083 gatataaattcacct i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1536381 15 - 107702431 gatataaattcaccc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1028791 15 - 2200435 gatataaattcacct i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1455064 15 - 13651311 gatataaatgcacct i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1444129 1 - 108792865 --------C------ i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1273306 7 - 7082604 --------TTTACAT i saiBol1.JH378218 C 0 I 1 e aotNan1.NW_018513311v1 185591 377 + 287728 I e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=43263.000000 s hg38.chr2_KI270774v1_alt 193279 14 + 223625 ATAGGTATAAAAGA s gorGor5.CYUI01015607v1 1453199 5 + 1464242 atagg--------- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1179646 14 + 81552678 ataggtataaaaga i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 4602 14 - 11509 ataggtataaaaga i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1473874 14 - 111193037 ataggtataaaaga i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1502131 14 + 3644372 ataggtataaaaga i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1457147 14 - 10304083 ataggtataaaaga i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1536396 14 - 107702431 ataggtataaaaga i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1028806 14 - 2200435 ataggtataaaaga i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1455079 14 - 13651311 ataggtataaaaga i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1444130 9 - 108792865 ATTGGCGTA----- i calJac3.chr14 C 0 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e saiBol1.JH378218 1273313 1 - 7082604 I e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=93986.000000 s hg38.chr2_KI270774v1_alt 193293 63 + 223625 ATAGATTTAGATTTCGGTACAACTCTCCCTATATAAGTTTAGACGTAGATACACATATAGATT s nomLeu3.chr19 1179660 63 + 81552678 atagacttagatttaggtatagctctccctatataagtttagatgtagacacacgtacagatt i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 4616 21 - 11509 atagatttagatttaggtata------------------------------------------ i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1473888 63 - 111193037 atagatttagatttaggtataggtatccctatatatgtttagatgtagaaacacacatagatt i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1502145 63 + 3644372 atagatttagatttaggtataggtatccctatatatgtttagatgtagaaacacacatagatt i macNem1.NW_012011978v1 C 0 I 9 s cerAty1.NW_012000820v1 1457161 63 - 10304083 atagatttagatttagatataggtatccctatatatgtttagatgtagaaacacacatagatt i cerAty1.NW_012000820v1 C 0 I 9 s chlSab2.chr14 1536410 21 - 107702431 atagatttagatttaggtata------------------------------------------ i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1028820 21 - 2200435 atagatttaaatttaggtata------------------------------------------ i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1455093 21 - 13651311 atagatttagatttaggtata------------------------------------------ i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1444139 63 - 108792865 TTAGATGTAGCTTTAGGAATAGCTATCCCTGTGTAGGTCGAGATGTGGATGCAAACAGAGCTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1273314 63 - 7082604 ATAGATGTAGCTGTAGGAATAGCTATCCCTATGTAAGTTGAGATGTGGATACAAACATAGCTT i saiBol1.JH378218 I 1 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e gorGor5.CYUI01015607v1 1453204 0 + 1464242 C e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=3986.000000 s hg38.chr2_KI270774v1_alt 193356 10 + 223625 CAGGCATCGA s nomLeu3.chr19 1179723 10 + 81552678 taggcatcga i nomLeu3.chr19 C 0 I 18017 s calJac3.chr14 1444202 10 - 108792865 TAGGTATCGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1273377 10 - 7082604 CAGGTGCCGA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e colAng1.NW_012118821v1 1455114 0 - 13651311 C e manLeu1.NW_012103754v1 1028841 0 - 2200435 C e chlSab2.chr14 1536431 0 - 107702431 C e cerAty1.NW_012000820v1 1457224 9 - 10304083 I e macNem1.NW_012011978v1 1502208 9 + 3644372 I e macFas5.chr13 1473951 0 - 111193037 C e rheMac8.chrUn_NW_015079380v1 4637 0 - 11509 C e gorGor5.CYUI01015607v1 1453204 0 + 1464242 C e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=546.000000 s hg38.chr2_KI270774v1_alt 193366 1 + 223625 T s gorGor5.CYUI01015607v1 1453204 1 + 1464242 t i gorGor5.CYUI01015607v1 C 0 C 0 s calJac3.chr14 1444212 1 - 108792865 T i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1273387 1 - 7082604 T i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e colAng1.NW_012118821v1 1455114 0 - 13651311 C e manLeu1.NW_012103754v1 1028841 0 - 2200435 C e chlSab2.chr14 1536431 0 - 107702431 C e cerAty1.NW_012000820v1 1457224 9 - 10304083 I e macNem1.NW_012011978v1 1502208 9 + 3644372 I e macFas5.chr13 1473951 0 - 111193037 C e rheMac8.chrUn_NW_015079380v1 4637 0 - 11509 C e nomLeu3.chr19 1179733 18017 + 81552678 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=422.000000 s hg38.chr2_KI270774v1_alt 193367 1 + 223625 A s gorGor5.CYUI01015607v1 1453205 1 + 1464242 a i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1197750 1 + 81552678 a i nomLeu3.chr19 I 18017 C 0 s calJac3.chr14 1444213 1 - 108792865 A i calJac3.chr14 C 0 I 71 s saiBol1.JH378218 1273388 1 - 7082604 G i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e colAng1.NW_012118821v1 1455114 0 - 13651311 C e manLeu1.NW_012103754v1 1028841 0 - 2200435 C e chlSab2.chr14 1536431 0 - 107702431 C e cerAty1.NW_012000820v1 1457224 9 - 10304083 I e macNem1.NW_012011978v1 1502208 9 + 3644372 I e macFas5.chr13 1473951 0 - 111193037 C e rheMac8.chrUn_NW_015079380v1 4637 0 - 11509 C e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=546.000000 s hg38.chr2_KI270774v1_alt 193368 1 + 223625 T s gorGor5.CYUI01015607v1 1453206 1 + 1464242 t i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1197751 1 + 81552678 t i nomLeu3.chr19 C 0 C 0 s saiBol1.JH378218 1273389 1 - 7082604 T i saiBol1.JH378218 C 0 T 77 e aotNan1.NW_018513311v1 185591 377 + 287728 I e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e calJac3.chr14 1444214 71 - 108792865 I e colAng1.NW_012118821v1 1455114 0 - 13651311 C e manLeu1.NW_012103754v1 1028841 0 - 2200435 C e chlSab2.chr14 1536431 0 - 107702431 C e cerAty1.NW_012000820v1 1457224 9 - 10304083 I e macNem1.NW_012011978v1 1502208 9 + 3644372 I e macFas5.chr13 1473951 0 - 111193037 C e rheMac8.chrUn_NW_015079380v1 4637 0 - 11509 C e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=1392.000000 s hg38.chr2_KI270774v1_alt 193369 5 + 223625 AAAAG s gorGor5.CYUI01015607v1 1453207 5 + 1464242 aaaag i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1197752 5 + 81552678 aaaag i nomLeu3.chr19 C 0 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e saiBol1.JH378218 1273390 77 - 7082604 T e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e calJac3.chr14 1444214 71 - 108792865 I e colAng1.NW_012118821v1 1455114 0 - 13651311 C e manLeu1.NW_012103754v1 1028841 0 - 2200435 C e chlSab2.chr14 1536431 0 - 107702431 C e cerAty1.NW_012000820v1 1457224 9 - 10304083 I e macNem1.NW_012011978v1 1502208 9 + 3644372 I e macFas5.chr13 1473951 0 - 111193037 C e rheMac8.chrUn_NW_015079380v1 4637 0 - 11509 C e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=79760.000000 s hg38.chr2_KI270774v1_alt 193374 73 + 223625 AATAGATTTAGATTTCGGTACAGCTCTCCCTACATAAGTTTAGATGTAGATACACATATAGATTCAGGCGCTG s gorGor5.CYUI01015607v1 1453212 73 + 1464242 aatagatttagatttcggtacagctctccctacataagtttagatgtagatacacatataaattcaggcgttg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1197757 73 + 81552678 aatagacttagatttaggtatagctctccctatataagtttagatgtagacacacgtacagatttaggcatcg i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 4637 51 - 11509 ----------------ggta------tccctatatatgtttagatgtagaaacacacatagatttcggtgtca i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1473951 9 - 111193037 ----------------------------------------------------------------tcggtgtca i macFas5.chr13 C 0 I 1 s chlSab2.chr14 1536431 51 - 107702431 ----------------ggta------tccctatatatgtttagatgtagaaacacacatagatttcggtgtca i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1028841 51 - 2200435 ----------------ggta------tccctatatatgtttagatgtagaaacacacatagatttcggtgtca i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1455114 51 - 13651311 ----------------ggta------tccctatgtaagtttagatgtagaaacacacatagatttagGTGTCA i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1273313 73 - 7082604 AATAGATGTAGCTGTAGGAATAGCTATCCCTATGTAAGTTGAGATGTGGATACAAACATAGCTTCAGGTGCCG i saiBol1.JH378218 T 77 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e calJac3.chr14 1444214 71 - 108792865 I e cerAty1.NW_012000820v1 1457224 9 - 10304083 I e macNem1.NW_012011978v1 1502208 9 + 3644372 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=4095.000000 s hg38.chr2_KI270774v1_alt 193447 1 + 223625 A s gorGor5.CYUI01015607v1 1453285 1 + 1464242 a i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1197830 1 + 81552678 a i nomLeu3.chr19 C 0 T 18098 s rheMac8.chrUn_NW_015079380v1 4688 1 - 11509 a i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macNem1.NW_012011978v1 1502217 1 + 3644372 a i macNem1.NW_012011978v1 I 9 C 0 s cerAty1.NW_012000820v1 1457233 1 - 10304083 a i cerAty1.NW_012000820v1 I 9 C 0 s chlSab2.chr14 1536482 1 - 107702431 a i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1028892 1 - 2200435 a i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1455165 1 - 13651311 A i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1273386 1 - 7082604 A i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e calJac3.chr14 1444214 71 - 108792865 I e macFas5.chr13 1473960 1 - 111193037 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=312486.000000 s hg38.chr2_KI270774v1_alt 193448 77 + 223625 TATAATTATAGAGGGAGCTCTGCTT-TTGCAGTGTTTTGTTCCTAACG-------------TTGCGGTTAAAGGAACTGTATTCATTTCCT s gorGor5.CYUI01015607v1 1453286 77 + 1464242 tataattatagaGGGAGCTCTGCTT-TTGTAGTGTTTTGTTCCTAACG-------------TTGTGGTTAAAGGAACGGTATTCATTTCTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1179733 77 + 81552678 tataattatagaGGGAGCTCTGTTT-TTGTTGTGTTGTGTTCCTAACA-------------TTGCGGTTAAAGGAACTGTATTCATTTCCT i nomLeu3.chr19 T 18098 C 0 s rheMac8.chrUn_NW_015079380v1 4689 77 - 11509 tataattatggaGGGAGCTCTGCTT-TTGTTGTGTTTTGTTCCTAACG-------------TTGCAATTAAGGGAACtgtattgatttcct i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1473961 77 - 111193037 tataattatggaGGGAGCTCTGCTT-TTGTTGTGTTTTGTTCCTAACG-------------TTGCAATTAAGGGAACtgtattgatttcct i macFas5.chr13 I 1 C 0 s macNem1.NW_012011978v1 1502218 77 + 3644372 tataattatggaGGGAGCTCTGCTT-TTGTTGTGTTTTGTTCCTAACG-------------TTGCAATTAAGGGAACtgtattgatttcct i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1457234 90 - 10304083 tataattatggaGGGAGCTCTGCTT-TTGTTGTGTTTTGTTCCTAACAAAACACAACAGTTTTGGAGTTAAAGGAACTATATTGATTTCCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1536483 77 - 107702431 tataattatggaGGGAGCTCTACTT-TTGTTGTGTTTTGTTCCTAACG-------------TTGCAGTTAAAGGAACTGTATTGATTTCCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1028893 77 - 2200435 tataattatggaGGGAGCTCTGCTT-TTGTTGTGTTTTGTTCCTAACG-------------TTGCAGTTAAAGGAACTGTATTGATTTCCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1455166 77 - 13651311 TGTAATTACGGAGGGAGCTCTGCTT-TTGTTGTGTTTTGTTCCTAACG-------------TTGCAGTTAAAGGAACTGTATTGATTTCCT i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1273387 78 - 7082604 TGTCATCACAGAGGACGCTCTGCCTGTGGTGGTCTTTTCTTTCAAACA-------------CTGTGGTGAATGGAACtgtatccctttccc i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e calJac3.chr14 1444214 71 - 108792865 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=45060.000000 s hg38.chr2_KI270774v1_alt 193525 13 + 223625 GGGGGTGCCACAG s nomLeu3.chr19 1179810 13 + 81552678 GGGGGTGCCACAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 4766 13 - 11509 gggggtgccatag i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1474038 13 - 111193037 gggggtgccatag i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1502295 13 + 3644372 gggggtgccatag i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1457324 13 - 10304083 GGGGGTGCCGTGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1536560 13 - 107702431 GGGGGTGCCGCAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1028970 13 - 2200435 GGGGGTGCCGTGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1455243 13 - 13651311 GGGGGTGCCGTGG i colAng1.NW_012118821v1 C 0 C 0 s saiBol1.JH378218 1273465 13 - 7082604 gggaatgccacaa i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e calJac3.chr14 1444214 71 - 108792865 I e gorGor5.CYUI01015607v1 1453363 0 + 1464242 C e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=145582.000000 s hg38.chr2_KI270774v1_alt 193538 47 + 223625 CACAGCCCTGCAGACTGGGGGTGCCACAGCACAGCCCTGCAGACTGG s nomLeu3.chr19 1179823 47 + 81552678 CAAAGCCCTGCAGACTGGGGGTGCCACAGCAAAGCCCTGCAGACTGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 4779 47 - 11509 caaagccctgcagactgggGGTGCCGTGGCAAAGCCCTGCAGACTGG i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1474051 47 - 111193037 caaagccctgcagactgggAGTGCCGTGGCAAAGCCCTGCAGACTGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1502308 47 + 3644372 caaagccctgcagactgggGGTGCCGTGGCAAAGCCCTGCAGACTGG i macNem1.NW_012011978v1 C 0 I 105 s cerAty1.NW_012000820v1 1457337 46 - 10304083 CAAAGCCCTGCAGACTGGGGGTGCCGTGGCAAAG-CCTGCAGACTGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1536573 47 - 107702431 CAAAGCCCTGCAGACTGGGGGTGCCATAGCAAAGCCCTGCAGACTGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1028983 47 - 2200435 CAAAGCCCTGCAGACTGGGGATGCCACAGCAAAGCCCTGCAGACTGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1455256 47 - 13651311 CAAAGCCCTGCAGACTGGGGGTGCCGCAGCAAAGCCCTGCAGATTGG i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e saiBol1.JH378218 1273478 0 - 7082604 C e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e calJac3.chr14 1444214 71 - 108792865 I e gorGor5.CYUI01015607v1 1453363 0 + 1464242 C e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=39519.000000 s hg38.chr2_KI270774v1_alt 193585 14 + 223625 GGGTGCCACAGCAA s nomLeu3.chr19 1179870 14 + 81552678 GGGTGCCACAGCAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 4826 14 - 11509 GGGTGCCGTGGCAA i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1474098 14 - 111193037 GGGTGCCGTGGCAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1502460 14 + 3644372 GGGTGCCGTAGCAA i macNem1.NW_012011978v1 I 105 C 0 s cerAty1.NW_012000820v1 1457383 14 - 10304083 GGATGCCACAGCAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1536620 14 - 107702431 GGGTGCCATAGCAA i chlSab2.chr14 C 0 T 29 s manLeu1.NW_012103754v1 1029030 14 - 2200435 GGGTGCCATCGCAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1455303 14 - 13651311 GGGTGCCGCAGCAA i colAng1.NW_012118821v1 C 0 T 29 e aotNan1.NW_018513311v1 185591 377 + 287728 I e saiBol1.JH378218 1273478 0 - 7082604 C e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e calJac3.chr14 1444214 71 - 108792865 I e gorGor5.CYUI01015607v1 1453363 0 + 1464242 C e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=75950.000000 s hg38.chr2_KI270774v1_alt 193599 28 + 223625 AGCCCTGCAGACTGGGGGTGCCACAGCG s nomLeu3.chr19 1179884 28 + 81552678 AGCCCTGCAGActgggggtgccacacca i nomLeu3.chr19 C 0 I 18099 s rheMac8.chrUn_NW_015079380v1 4840 21 - 11509 AGCCCTGCAGACTGGGGGTGC------- i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1474112 28 - 111193037 AGCCCTGCAGACTGGGGGTGCCATAGCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1502474 28 + 3644372 AGCCCTGCAGACTGGGGGTGCCGTAGCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1457397 27 - 10304083 AG-CCTGCAGACTGGGGGTGCCGTAGCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1536605 28 - 107702431 AGCCCTGCAGACTGGGGGTGCCATAGCA i chlSab2.chr14 T 29 C 0 s manLeu1.NW_012103754v1 1029044 28 - 2200435 AGCCCTGCAGACTGGGGGTGCCACAGCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1455288 28 - 13651311 AGCCCTGCAGATTGGGGGTGCCGCAGCA i colAng1.NW_012118821v1 T 29 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e saiBol1.JH378218 1273478 0 - 7082604 C e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e calJac3.chr14 1444214 71 - 108792865 I e gorGor5.CYUI01015607v1 1453363 0 + 1464242 C e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=113861.000000 s hg38.chr2_KI270774v1_alt 193627 46 + 223625 CAGCCCTGCAGACTGGGGGTGCCACAGCGCAGCCCTGCAGACTGGG s nomLeu3.chr19 1198011 46 + 81552678 AAGCCCTGCAGACTGGGGGTGCCACAGCAAAGCCCTGCAGACTGGG i nomLeu3.chr19 I 18099 C 0 s rheMac8.chrUn_NW_015079380v1 4861 21 - 11509 -------------------------GGCAAAGCCCTGCAGACTGGG i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1474140 46 - 111193037 AAGCCCTGCAGACTGGGGATGTCGCAGCAAAGCCCTGCAGACTGGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1502502 46 + 3644372 AAGCCCTGCAGActgggggtgccgtagcaaagccctgcagactggg i macNem1.NW_012011978v1 C 0 I 303 s cerAty1.NW_012000820v1 1457424 44 - 10304083 AAG-CCTGCAGACTGGGGATGCCACAGCAAAG-CCTGCAGActggg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1536633 46 - 107702431 AAGCCCTGCAGACTGGGGGTGCCATAGCAAAGCCCTGCAGActggg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1029072 46 - 2200435 AAGCCCTGCAGActgggggtgccacagcaaagccctgcagactggg i manLeu1.NW_012103754v1 C 0 I 302 s colAng1.NW_012118821v1 1455316 46 - 13651311 AAGCCCTGCAGGCTGGGGGTGCCGCAGCAAAGCCCTGCAGATTGGG i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e saiBol1.JH378218 1273478 0 - 7082604 C e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e calJac3.chr14 1444214 71 - 108792865 I e gorGor5.CYUI01015607v1 1453363 0 + 1464242 C e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=34161.000000 s hg38.chr2_KI270774v1_alt 193673 29 + 223625 GGTGCCACAGCGCAGCCCTGCAGACTGGG s nomLeu3.chr19 1198057 29 + 81552678 GGTGCCATAGCAAAGCCCTGCAGACTGGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1474186 29 - 111193037 GGTGCCGTAGCAAAGCCCTGCAGACTGGG i macFas5.chr13 C 0 C 0 s cerAty1.NW_012000820v1 1457468 28 - 10304083 ggtgtcgcagcaaag-cctgcagactggg i cerAty1.NW_012000820v1 C 0 I 304 s chlSab2.chr14 1536679 29 - 107702431 ggtgccgcagcaaagccctgcagtctggg i chlSab2.chr14 C 0 T 116 s colAng1.NW_012118821v1 1455362 29 - 13651311 GGTGCCGCAGCAAAGCCCTGCAGActggg i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e saiBol1.JH378218 1273478 0 - 7082604 C e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e calJac3.chr14 1444214 71 - 108792865 I e manLeu1.NW_012103754v1 1029118 302 - 2200435 I e macNem1.NW_012011978v1 1502548 303 + 3644372 I e rheMac8.chrUn_NW_015079380v1 4882 0 - 11509 C e gorGor5.CYUI01015607v1 1453363 0 + 1464242 C e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=22973.000000 s hg38.chr2_KI270774v1_alt 193702 28 + 223625 GGTGCCACAGCGCAGCCCTGCAGACTGG s nomLeu3.chr19 1198086 28 + 81552678 GGTGCCACAGCAAAGCCCTGCAGActgg i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 4882 28 - 11509 GATGTCGCAGCAAAGCCCTGCAGACTGG i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1474215 28 - 111193037 AATGTCGCAGCAAAGCCCTGCAGACTGG i macFas5.chr13 C 0 C 0 s colAng1.NW_012118821v1 1455391 28 - 13651311 ggtgccgcagcaaagccctgcagactgg i colAng1.NW_012118821v1 C 0 T 58 e aotNan1.NW_018513311v1 185591 377 + 287728 I e saiBol1.JH378218 1273478 0 - 7082604 C e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e calJac3.chr14 1444214 71 - 108792865 I e manLeu1.NW_012103754v1 1029118 302 - 2200435 I e chlSab2.chr14 1536708 116 - 107702431 T e cerAty1.NW_012000820v1 1457496 304 - 10304083 I e macNem1.NW_012011978v1 1502548 303 + 3644372 I e gorGor5.CYUI01015607v1 1453363 0 + 1464242 C e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=600.000000 s hg38.chr2_KI270774v1_alt 193730 1 + 223625 G s nomLeu3.chr19 1198114 1 + 81552678 g i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 4910 1 - 11509 G i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1474243 1 - 111193037 G i macFas5.chr13 C 0 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e saiBol1.JH378218 1273478 0 - 7082604 C e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e calJac3.chr14 1444214 71 - 108792865 I e colAng1.NW_012118821v1 1455419 58 - 13651311 T e manLeu1.NW_012103754v1 1029118 302 - 2200435 I e chlSab2.chr14 1536708 116 - 107702431 T e cerAty1.NW_012000820v1 1457496 304 - 10304083 I e macNem1.NW_012011978v1 1502548 303 + 3644372 I e gorGor5.CYUI01015607v1 1453363 0 + 1464242 C e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=20971.000000 s hg38.chr2_KI270774v1_alt 193731 28 + 223625 GGTGCCACAGCGCAGCCCTGCAGACTGG s nomLeu3.chr19 1198115 27 + 81552678 ggtgccacacca-agccctgcagattgg i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 4911 28 - 11509 GGTGCCGCAGCAAAGCCCTGCAGACTGG i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1474244 28 - 111193037 GGTGCCGTAGCAAAGCCCTGCAGACTGG i macFas5.chr13 C 0 C 0 s chlSab2.chr14 1536592 28 - 107702431 GGTGCCATAGCAAAGCCCTGCAGACTGG i chlSab2.chr14 T 116 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e saiBol1.JH378218 1273478 0 - 7082604 C e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e calJac3.chr14 1444214 71 - 108792865 I e colAng1.NW_012118821v1 1455419 58 - 13651311 T e manLeu1.NW_012103754v1 1029118 302 - 2200435 I e cerAty1.NW_012000820v1 1457496 304 - 10304083 I e macNem1.NW_012011978v1 1502548 303 + 3644372 I e gorGor5.CYUI01015607v1 1453363 0 + 1464242 C e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=1500.000000 s hg38.chr2_KI270774v1_alt 193759 1 + 223625 G s nomLeu3.chr19 1198142 1 + 81552678 g i nomLeu3.chr19 C 0 T 144 s rheMac8.chrUn_NW_015079380v1 4939 1 - 11509 G i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1474272 1 - 111193037 G i macFas5.chr13 C 0 C 0 s chlSab2.chr14 1536620 1 - 107702431 G i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1455361 1 - 13651311 G i colAng1.NW_012118821v1 T 58 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e saiBol1.JH378218 1273478 0 - 7082604 C e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e calJac3.chr14 1444214 71 - 108792865 I e manLeu1.NW_012103754v1 1029118 302 - 2200435 I e cerAty1.NW_012000820v1 1457496 304 - 10304083 I e macNem1.NW_012011978v1 1502548 303 + 3644372 I e gorGor5.CYUI01015607v1 1453363 0 + 1464242 C e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=53300.000000 s hg38.chr2_KI270774v1_alt 193760 42 + 223625 GGTGCCACAGCGCAGCCCTGCAGACTGGGGGTGCCACAGCGC s nomLeu3.chr19 1197999 42 + 81552678 GGTGCCACAGCAAAGCCCTGCAGACTGGGGGTGCCACAGCAA i nomLeu3.chr19 T 144 C 0 s rheMac8.chrUn_NW_015079380v1 4940 42 - 11509 GGTGCCGCAGCAAAGCCCTGCAGACTGGGGGTGCCGTAGCAA i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1474273 42 - 111193037 GGTGCCGTAGCAAAGCCCTGCAGACTGGGGGTGCCGTAGCAA i macFas5.chr13 C 0 C 0 s chlSab2.chr14 1536621 42 - 107702431 GGTGCCATAGCAAAGCCCTGCAGACTGGGGGTGCCATAGCAA i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1455362 42 - 13651311 GGTGCCGCAGCAAAGCCCTGCAGActgggggtgccgcagcaa i colAng1.NW_012118821v1 C 0 T 87 e aotNan1.NW_018513311v1 185591 377 + 287728 I e saiBol1.JH378218 1273478 0 - 7082604 C e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e calJac3.chr14 1444214 71 - 108792865 I e manLeu1.NW_012103754v1 1029118 302 - 2200435 I e cerAty1.NW_012000820v1 1457496 304 - 10304083 I e macNem1.NW_012011978v1 1502548 303 + 3644372 I e gorGor5.CYUI01015607v1 1453363 0 + 1464242 C e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=37122.000000 s hg38.chr2_KI270774v1_alt 193802 29 + 223625 AGCCCTGCAGACTGGGGGTGCCACAGCGC s nomLeu3.chr19 1198041 29 + 81552678 AGCCCTGCAGACTGGGGGTGCCATAGCAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 4982 29 - 11509 AGCCCTGCAGACTGGGGGTGCCGTAGCAA i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1474315 29 - 111193037 AGCCCTGCAGActgggggtaccgtagcaa i macFas5.chr13 C 0 C 0 s chlSab2.chr14 1536663 29 - 107702431 AGCCCTGCAGActgggggtgccgcagcaa i chlSab2.chr14 C 0 T 58 s colAng1.NW_012118821v1 1455317 29 - 13651311 AGCCCTGCAGGCTGGGGGTGCCGCAGCAA i colAng1.NW_012118821v1 T 87 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e saiBol1.JH378218 1273478 0 - 7082604 C e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e calJac3.chr14 1444214 71 - 108792865 I e manLeu1.NW_012103754v1 1029118 302 - 2200435 I e cerAty1.NW_012000820v1 1457496 304 - 10304083 I e macNem1.NW_012011978v1 1502548 303 + 3644372 I e gorGor5.CYUI01015607v1 1453363 0 + 1464242 C e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=4365.000000 s hg38.chr2_KI270774v1_alt 193831 3 + 223625 AGC s nomLeu3.chr19 1198070 3 + 81552678 AGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 5011 3 - 11509 AGC i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1474344 3 - 111193037 agc i macFas5.chr13 C 0 T 34 s chlSab2.chr14 1536634 3 - 107702431 AGC i chlSab2.chr14 T 58 C 0 s colAng1.NW_012118821v1 1455346 3 - 13651311 AGC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e saiBol1.JH378218 1273478 0 - 7082604 C e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e calJac3.chr14 1444214 71 - 108792865 I e manLeu1.NW_012103754v1 1029118 302 - 2200435 I e cerAty1.NW_012000820v1 1457496 304 - 10304083 I e macNem1.NW_012011978v1 1502548 303 + 3644372 I e gorGor5.CYUI01015607v1 1453363 0 + 1464242 C e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=10116.000000 s hg38.chr2_KI270774v1_alt 193834 11 + 223625 CCTGCAGACTG s nomLeu3.chr19 1198073 11 + 81552678 CCTGCAGACTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 5014 11 - 11509 CCTGCAGACTG i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s chlSab2.chr14 1536637 11 - 107702431 CCTGCAGACTG i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1455349 11 - 13651311 CCTGCAGATTG i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e saiBol1.JH378218 1273478 0 - 7082604 C e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e calJac3.chr14 1444214 71 - 108792865 I e manLeu1.NW_012103754v1 1029118 302 - 2200435 I e cerAty1.NW_012000820v1 1457496 304 - 10304083 I e macNem1.NW_012011978v1 1502548 303 + 3644372 I e macFas5.chr13 1474347 34 - 111193037 T e gorGor5.CYUI01015607v1 1453363 0 + 1464242 C e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=16922.000000 s hg38.chr2_KI270774v1_alt 193845 13 + 223625 GGGGTGCCACAGC s gorGor5.CYUI01015607v1 1453363 13 + 1464242 GGGGTGCCATAGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1198084 13 + 81552678 GGGGTGCCACAGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 5025 13 - 11509 GGGGTGCCGTAGC i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s chlSab2.chr14 1536648 13 - 107702431 GGGGTGCCATAGC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1455360 13 - 13651311 GGGGTGCCGCAGC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e saiBol1.JH378218 1273478 0 - 7082604 C e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e calJac3.chr14 1444214 71 - 108792865 I e manLeu1.NW_012103754v1 1029118 302 - 2200435 I e cerAty1.NW_012000820v1 1457496 304 - 10304083 I e macNem1.NW_012011978v1 1502548 303 + 3644372 I e macFas5.chr13 1474347 34 - 111193037 T e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=23418.000000 s hg38.chr2_KI270774v1_alt 193858 13 + 223625 GCAGCCCTGCAGA s gorGor5.CYUI01015607v1 1453376 13 + 1464242 AAAGTCCTGCAGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1198097 13 + 81552678 AAAGCCCTGCAGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 5038 13 - 11509 AAAGCCCTGCAGA i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1474313 13 - 111193037 AAAGCCCTGCAGA i macFas5.chr13 T 34 C 0 s chlSab2.chr14 1536661 13 - 107702431 AAAGCCCTGCAGA i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1455373 13 - 13651311 AAAGCCCTGCAGA i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e saiBol1.JH378218 1273478 0 - 7082604 C e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e calJac3.chr14 1444214 71 - 108792865 I e manLeu1.NW_012103754v1 1029118 302 - 2200435 I e cerAty1.NW_012000820v1 1457496 304 - 10304083 I e macNem1.NW_012011978v1 1502548 303 + 3644372 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=31154.000000 s hg38.chr2_KI270774v1_alt 193871 16 + 223625 ctgggggtgccacagc s gorGor5.CYUI01015607v1 1453389 16 + 1464242 ctgggggtgccatagc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1198110 16 + 81552678 ctgggggtgccacacc i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 5051 16 - 11509 ctgggggtgccgtagc i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1474326 16 - 111193037 ctgggggtaccgtagc i macFas5.chr13 C 0 I 5 s chlSab2.chr14 1536674 16 - 107702431 ctgggggtgccgcagc i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1455386 16 - 13651311 ctgggggtgccgcagc i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1444285 15 - 108792865 CCGgggatgccacaa- i calJac3.chr14 I 71 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e saiBol1.JH378218 1273478 0 - 7082604 C e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e manLeu1.NW_012103754v1 1029118 302 - 2200435 I e cerAty1.NW_012000820v1 1457496 304 - 10304083 I e macNem1.NW_012011978v1 1502548 303 + 3644372 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=755.000000 s hg38.chr2_KI270774v1_alt 193887 1 + 223625 g s gorGor5.CYUI01015607v1 1453405 1 + 1464242 a i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1198126 1 + 81552678 a i nomLeu3.chr19 C 0 T 18215 s rheMac8.chrUn_NW_015079380v1 5067 1 - 11509 a i rheMac8.chrUn_NW_015079380v1 C 0 I 1 s chlSab2.chr14 1536690 1 - 107702431 a i chlSab2.chr14 C 0 I 1 s colAng1.NW_012118821v1 1455402 1 - 13651311 a i colAng1.NW_012118821v1 C 0 I 1 e aotNan1.NW_018513311v1 185591 377 + 287728 I e saiBol1.JH378218 1273478 0 - 7082604 C e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e calJac3.chr14 1444300 0 - 108792865 C e manLeu1.NW_012103754v1 1029118 302 - 2200435 I e cerAty1.NW_012000820v1 1457496 304 - 10304083 I e macNem1.NW_012011978v1 1502548 303 + 3644372 I e macFas5.chr13 1474342 5 - 111193037 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=100.000000 s hg38.chr2_KI270774v1_alt 193888 1 + 223625 c s gorGor5.CYUI01015607v1 1453406 1 + 1464242 c i gorGor5.CYUI01015607v1 C 0 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e saiBol1.JH378218 1273478 0 - 7082604 C e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e calJac3.chr14 1444300 0 - 108792865 C e colAng1.NW_012118821v1 1455403 1 - 13651311 I e manLeu1.NW_012103754v1 1029118 302 - 2200435 I e chlSab2.chr14 1536691 1 - 107702431 I e cerAty1.NW_012000820v1 1457496 304 - 10304083 I e macNem1.NW_012011978v1 1502548 303 + 3644372 I e macFas5.chr13 1474342 5 - 111193037 I e rheMac8.chrUn_NW_015079380v1 5068 1 - 11509 I e nomLeu3.chr19 1198127 18215 + 81552678 T e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=6567.000000 s hg38.chr2_KI270774v1_alt 193889 3 + 223625 agc s gorGor5.CYUI01015607v1 1453407 3 + 1464242 agc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1179912 3 + 81552678 agc i nomLeu3.chr19 T 18215 C 0 s rheMac8.chrUn_NW_015079380v1 5069 3 - 11509 agc i rheMac8.chrUn_NW_015079380v1 I 1 C 0 s chlSab2.chr14 1536692 3 - 107702431 agc i chlSab2.chr14 I 1 C 0 s colAng1.NW_012118821v1 1455404 3 - 13651311 agc i colAng1.NW_012118821v1 I 1 C 0 s calJac3.chr14 1444300 3 - 108792865 agt i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1273478 3 - 7082604 agt i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e manLeu1.NW_012103754v1 1029118 302 - 2200435 I e cerAty1.NW_012000820v1 1457496 304 - 10304083 I e macNem1.NW_012011978v1 1502548 303 + 3644372 I e macFas5.chr13 1474342 5 - 111193037 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=92392.000000 s hg38.chr2_KI270774v1_alt 193892 42 + 223625 cctgcagactgggcacttgaacaagagatttctctctcagca s gorGor5.CYUI01015607v1 1453410 42 + 1464242 cctgcagactgggcacttgaacaagagatttctctctcagcg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1179915 42 + 81552678 cctgcagattgggcacttgaacaagagatttctctctcagtg i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 5072 42 - 11509 cctgcagactgggcacttgaacaagagatttatctctcagcg i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1474347 42 - 111193037 cctgcagactgggcacttgaacaagagatttatctctcagcg i macFas5.chr13 I 5 C 0 s chlSab2.chr14 1536695 42 - 107702431 cctgcagtctgggcacttgaacaagaaatttatctcttagag i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1455407 42 - 13651311 cctgcagactggacacttgaacaagagatttatctctcagcg i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1444303 38 - 108792865 cctgaggactaagtccttg-acaagagattcat-tctcag-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1273481 35 - 7082604 cctgcagactaagcccttg----agagattcat-tctcag-- i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e cebCap1.NW_016107827v1 1367814 214 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e manLeu1.NW_012103754v1 1029118 302 - 2200435 I e cerAty1.NW_012000820v1 1457496 304 - 10304083 I e macNem1.NW_012011978v1 1502548 303 + 3644372 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=383124.000000 s hg38.chr2_KI270774v1_alt 193934 123 + 223625 agtcctggaggctggagtccaagatcaaggggagggcacggttggctccccctgaggactcaccccttggctgcagataccaccttctccccatgtcctcccagggcagtccctctgtgtgtc s gorGor5.CYUI01015607v1 1453452 122 + 1464242 agtcctggaggctggagtccaagatcaaggtgagggcagggttggctccccctgagaact-gccccttggctgcagataccaccttctccccatgtcctcccagggcagtccctctgtgtgtc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1179957 123 + 81552678 agtcctggaggctggagtccaagatcaaggtgagggcagtgttggcttcccctgaggacttgcctcttggctgcagacaccaccttctcccggtgtccccctagggcagtccctctgtgtgtc i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 5114 121 - 11509 agtcctggaggctggaatccaagatcaaggtgagagcagggctggcttcccctgaggactcgccccttggctgc-cacacca-cttctccccgtgtcctcccagggcggtccctctgtgtgtc i rheMac8.chrUn_NW_015079380v1 C 0 I 153 s macFas5.chr13 1474389 121 - 111193037 agtcctggaggctggaatccaagatcaaggtgagagcagggctggcttcccctgaggactcgccccttggctgc-cacacca-cttctccccgtgtcctcccagggcggtccctctgtgtgtc i macFas5.chr13 C 0 C 0 s chlSab2.chr14 1536737 121 - 107702431 agtcctggaggctggaatccaagatcaaggtgagagcagggctggctccccctcaggactcgccccttggctgc-gacaccc-cttctccccgtgtcctcccagggcggtccctctgtgtgtc i chlSab2.chr14 C 0 I 135 s colAng1.NW_012118821v1 1455449 122 - 13651311 agtcctggaggctgaaatccaagatcaaggtgagagcagggctggctccccctgaggactcgccccttggctgcagacacca-cttctccccatgtcctcccagggcagtccttctgtgtgtc i colAng1.NW_012118821v1 C 0 I 150 s calJac3.chr14 1444341 119 - 108792865 agtcctggaggctggagttcaaggtcacggtgagggcagggctggctcctcctgcggcctcatc-cgtggctgtggacacca-cttctccccatgtccttccgggt-ggtcccactatctgt- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1273516 120 - 7082604 agtcctggaggctggaattcaaggtcacggtgagggcggggctggctcctcctgaggcctcgtc-agtggctgcggacacca-cttctccccgtgtcctcccaggg-ggtcccgctatctgtc i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1368028 120 + 1864846 agtcccggaggctggaattcaaggtcatggtgagggcagggctggctcctcctgaggcctcgtc-cgtggctgcggacacca-cttctccccgtgtcctcccgggg-ggtcccgttatctgtc i cebCap1.NW_016107827v1 I 214 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e manLeu1.NW_012103754v1 1029118 302 - 2200435 I e cerAty1.NW_012000820v1 1457496 304 - 10304083 I e macNem1.NW_012011978v1 1502548 303 + 3644372 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=2515.000000 s hg38.chr2_KI270774v1_alt 194057 4 + 223625 catg s gorGor5.CYUI01015607v1 1453574 4 + 1464242 catg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1180080 4 + 81552678 catg i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1474510 4 - 111193037 tgag i macFas5.chr13 C 0 C 0 s calJac3.chr14 1444460 1 - 108792865 ---g i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1273636 4 - 7082604 cgcg i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1368148 4 + 1864846 cgtg i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 185591 377 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e colAng1.NW_012118821v1 1455571 150 - 13651311 I e manLeu1.NW_012103754v1 1029118 302 - 2200435 I e chlSab2.chr14 1536858 135 - 107702431 I e cerAty1.NW_012000820v1 1457496 304 - 10304083 I e macNem1.NW_012011978v1 1502548 303 + 3644372 I e rheMac8.chrUn_NW_015079380v1 5235 153 - 11509 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=47810.000000 s hg38.chr2_KI270774v1_alt 194061 27 + 223625 g---cctcatctcctcatctcataaggaca s gorGor5.CYUI01015607v1 1453578 27 + 1464242 g---cctcatctcctcatctcataaggaca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1180084 27 + 81552678 g---cctcatctcctcatctcataaggaca i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1474514 19 - 111193037 g-----------cctcatatcATAAGGATA i macFas5.chr13 C 0 I 128 s calJac3.chr14 1444461 27 - 108792865 g---cctcattgcctcgtctcataaggaca i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1273640 30 - 7082604 gtctcctcatcacctcgtctcataagggca i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1368152 27 + 1864846 g---cctcatcgcctcgtctcatgaagaca i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 185968 27 + 287728 g---cctcatcgcctcgtctcataaggacg i aotNan1.NW_018513311v1 I 377 C 0 e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e colAng1.NW_012118821v1 1455571 150 - 13651311 I e manLeu1.NW_012103754v1 1029118 302 - 2200435 I e chlSab2.chr14 1536858 135 - 107702431 I e cerAty1.NW_012000820v1 1457496 304 - 10304083 I e macNem1.NW_012011978v1 1502548 303 + 3644372 I e rheMac8.chrUn_NW_015079380v1 5235 153 - 11509 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=2467.000000 s hg38.chr2_KI270774v1_alt 194088 2 + 223625 ta s gorGor5.CYUI01015607v1 1453605 2 + 1464242 ta i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1180111 2 + 81552678 tg i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1474661 2 - 111193037 TG i macFas5.chr13 I 128 C 0 s manLeu1.NW_012103754v1 1029420 2 - 2200435 TA i manLeu1.NW_012103754v1 I 302 C 0 s calJac3.chr14 1444488 2 - 108792865 ca i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1273670 2 - 7082604 ca i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1368179 2 + 1864846 ca i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 185995 2 + 287728 ca i aotNan1.NW_018513311v1 C 0 C 0 e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e colAng1.NW_012118821v1 1455571 150 - 13651311 I e chlSab2.chr14 1536858 135 - 107702431 I e cerAty1.NW_012000820v1 1457496 304 - 10304083 I e macNem1.NW_012011978v1 1502548 303 + 3644372 I e rheMac8.chrUn_NW_015079380v1 5235 153 - 11509 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=1041964.000000 s hg38.chr2_KI270774v1_alt 194090 155 + 223625 gctgccttgggccacggcccacagtgacatccccatgccactgcaattacctcctcaaatgctccatccccaaat-cagccacattctgaggcccaggg-tgttggggattcagcatgagaatctgggagacccggttcagcccacgacaGCCAATT s gorGor5.CYUI01015607v1 1453607 154 + 1464242 gctgccttgggccacggcccacagtgacatccccatgccaccgcaattacctcctcaaatgctccatccccaaat-cagccacattctgaggcccgggg--gttgcggattcagcataagaatctgggagacccggttcagcccacaacaGCCAATT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1180113 155 + 81552678 gctgccttgggccacggcccacagtgacatccccatgccaccacaattacctcctcaaatgctccatccccaaat-cagccacattctgaggccggggg-cgttggggcttcaacataagaatctgggagacccagttcagcccacgacaGCCAATT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 5388 154 - 11509 GCTGCCttgggccacggcccatagtgacatccccatgtcgctgcaattaccccctcaaatgctccatccccaaat-cagccacattctgaggccagggg-cattggggcttcagcatgagaatctgggagatccagttcagcccacgacaG-CACAT i rheMac8.chrUn_NW_015079380v1 I 153 C 0 s macFas5.chr13 1474663 154 - 111193037 GCTGCCttgggccacggcccatagtgacatccccatgtcgctgcaattaccccctcaaatactccatccccaaat-cagccacattctgaggccagggg-cattggggcttcagcatgagaatctgggagatccagttcagcccacgacaG-CACAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1502851 154 + 3644372 GCTGCCttgggccacggcccatagtgacatccccatgtcgctgcaattaccccctcaagtgctccatccccaaat-cagccacattctgaggccagggg-cattggggcttcagcatgagaatctgggagatccagttcagcccacgacaG-CACAT i macNem1.NW_012011978v1 I 303 C 0 s cerAty1.NW_012000820v1 1457800 154 - 10304083 GCTGCCttgggccacggcccatagtgacatccccgtgtcactgcaattaccccctcaaatgctccatccccaaat-cagccacattctgaggccagggg-cattggggcttcagcatgagaatctgggagatccagttcagcccacgacaG-CACTT i cerAty1.NW_012000820v1 I 304 C 0 s chlSab2.chr14 1536993 154 - 107702431 GCTGCCttgggccacggcccatagtgacatccccatgccactgcaattaccccctcaaatgctccatccccaaat-cagccacattctgaggccagggg-cattggggcttgagcatgagaatctgggagatccagttcagcccacgacaG-CACTT i chlSab2.chr14 I 135 C 0 s manLeu1.NW_012103754v1 1029422 154 - 2200435 GCTGCCttgggccacggcccatagtgacatccccgtgtcactgcaattaccccctcaaatgctccatccccaaat-cagccacattctgaggccagggg-cattggggcttcagcatgagaatctgggagatccagttcagcccacgacaG-CACGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1455721 154 - 13651311 GCTGCCttgggccacggcccatagtgacatccccatgccactgcaattaccccctcaaatgctccgtccccaaat-cagccacattctgaagccagggg-gattggggctgcagcatgagaatctgggagatccagttcagcccacgacaG-CACTT i colAng1.NW_012118821v1 I 150 C 0 s calJac3.chr14 1444490 156 - 108792865 gctgcctgggaccacggcccacagtggcatccccgtggcaccacagttacctcctcaaatgctccatccccggatccagccatgttctgaggctagcgg-ggctaaggcttccacataagaatttaggaaacccagttcagctcatggcaGGCACTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1273672 157 - 7082604 gctacctgggaccacggcccacggtggcatccccgtggcaccacagttacctcctcaaatgctccatccccaaatccagccacgttctgaggccagcagtggctggggcttccacataagaatttgggaaacccagttcagctcgtggcaGGCACTC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1368181 157 + 1864846 gctgcctgggaccacggcccacggtggcatccacgtggcaccacagttacctcctcaaatgctccatccccagatccagcctcgctctgaggccagcagtggctggggcttccacagaagaatttgggaaacccagttcagctcgtggcaGGCACTG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 185997 156 + 287728 gccgcctgggaccacggcccgcagtggcatccccgtgacaccgcagttacctcctcaaatgctccatccccagatccagccacgttctgaggccagcgg-ggcttgggcttccacataagaatttgggaaacccagttcagctcatggcaGGCACTC i aotNan1.NW_018513311v1 C 0 C 0 e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1801736 639 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=951833.000000 s hg38.chr2_KI270774v1_alt 194245 152 + 223625 GGTCCATAGTGCCATCTTTTAATCTTCAGAATAAAAC-TTTAGAAGAAGTGTATACAACAGGAGCATGAGTTGCATAAACTAATTTCCAATATTTTGTTTCAAACG-TCTTGTTTTAG-TTTTTGTCCTGAGAACAATTACAA----CATACATTTATC s gorGor5.CYUI01015607v1 1453761 152 + 1464242 GGTCCATAGTGCCATCTTTTAATCTTCAGAATAAAAC-TTTAGAAGAAGTGTATACAACAGGAGCATGAGTTGCATAAACTAATTTCCAATATTTTGTTTCAAATG-TCTTGTTTTAG-TTTTTGTCCTGAGAACAATTACAA----CATACATTTGTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1180268 148 + 81552678 GGTCCATGGTGCCATCTTTTAATCTTCAGAATAAAAC-TTTAGAAGAAGTTCATACAACAGCAGCACGAGTTGCATAAACTAATTTCCAATATTTTGCTTCAAACG-TCTTGTTCTAG-TTTTTTTCCTGAGAACAATTACAA----CATACATT---- i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 5542 142 - 11509 GGCACACGGTGCCATCTTTTAATCTTCAGAATAAAAC-CTTAGAAGAAGTTCATAC-ACAGGA---------GCATAAGCTAATTTCCAACATTTTGCTTCAAATG-TCTCATTTTAG-TTTTTTTCCTGAGAACAATTACAA----CATATATTTATC i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1474817 142 - 111193037 GGCACACGGTGCCATCTTTTAATCTTCAGAATAAAAC-CTTAGAAGAAGTTCATAC-ACAGGA---------GCATAAGCTAATTTCCAACATTTTGCTTCAAATG-TCTCATTTTAG-TTTTTTTCCTGAGAACAATTACAA----CATATATTTATC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1503005 142 + 3644372 GGCACACGGTGCCATCTTTTAATCTTCAGAATTAAAC-CTTAGAAGAAGTTCATAC-ACAGGA---------GCATAAGCTAATTTCCAACATTTTGCTTCAAATG-TCTCATTTTAG-TTTTTTTCCTGAGAACAATTACAA----CATATATTTATC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1457954 143 - 10304083 GGCCCACGGTGCCATCTTTTAATCTTCAGAATAAAAC-CTTAGAAGAAGTTCATAC-ACAGGA---------GCATAAGCTAATTTCCAACATTTTGCTTCAAATGTTTTCGTTTTAG-TTTTTTTCCTGAGAACAATTACAA----CATGTATTTATC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1537147 142 - 107702431 GGCCCACGGTGCCATCTTTTAATCTTCAGAATAAAAC-CTTAGAAGAAGTTCATAC-ACGGGA---------GCATAAGCTAATTTCCAACATTTTGCTTCAAGTG-TCTCGTTTTAG-TTTTTTTCCTGAGAACAATTACAA----CATACATTTATC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1029576 142 - 2200435 GGCCCACGGTGCCATCTTTTAATCTTCAGAATAAAAC-CTTAGAAGAAGTTCATAC-ACAGGA---------GCATAAGCTAATTTCCAACATGTTGCTTCAAATG-TCTCGTTTTAG-TTTTTTTCCTGAGAACAATTACAA----CATATATTTATC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1455875 140 - 13651311 GGCCCACGGCACCATCTTTTAATCTTCGGAATAAAAC-CTT---AGAAGTTCATAC-ACAGGA---------GCATAAGCTAATTTCCAAGATTTTGCTTCAAATG-TCTCCTTTTAGTTTTTTTTCCTGAGAACAATTACAA----CATACATTTATC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1444646 151 - 108792865 GGTCCATGGTGCCACCTTTTAATCTTCAGAATAAAAC-TTTACAAGAGGTTCATAC-ACGGGCATAGGAGTTGCACAAACTATTTTCCAATGTTTTGTTTCAAACC-TCTTTTTGTAG-TTTTTTTCCTGAGAGCAATTACAA----CAGATGTTTATC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1273829 152 - 7082604 GATCCATGGTGCCACCTTTTAATCTTCAGAATAAAAC-TTTACAGGAAGTTCATAC-ACAGGCGTAGGAGTTGCACAAACCGTTTTCCAATGTTTTGTTTCAAACC-TCTTGTTTTAGTTTTTTTTCCTGAGAGTAATTACAA----CAGAGGTTTATC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1368338 150 + 1864846 GGTCCACAGTGCCACC-TTTAATCTTCAGAATACAGC-TTTACAGGCAGTTCATAC-ACAGGCGCGGGAGCTGCACAAACTATTTTCCAGTGTTTCGTTTCAAGCC-TCTTGTTTTAG-TTTTTTTCCTGAGAGCGATTACAA----CAGACATTCATC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 186153 150 + 287728 GGTCCATGGTGCCACCTTTTAATCTTCAGAATAAAAC-TTTACAAGAAGTTCGTAC-ACAGGCATAGGAG-TGCACAAACTGTTTTCCAATGTTTTCCTTCAAACC-TCTTCGTTTAG-TTTTTTTCCTGGGAGCAATTACAA----CAGACGTTTATC i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1802375 155 + 4416731 GGTTCATAATGTCAT-TTTCAATCTTTGAAATAAAACATTTTTTGAAAGCCCCTAT-ATAAAAGTACAAATTACACAAACTGACTTCCAATATTTGGACACCAATG-TCTTGCTTTAA-GTTTTTTCATTGTCAGAATTATTATCTTCATAAATATCTC i dasNov3.JH576208 I 639 C 0 e otoGar3.GL873658 965825 540 + 5252280 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=2300.000000 s hg38.chr2_KI270774v1_alt 194397 1 + 223625 T s gorGor5.CYUI01015607v1 1453913 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1180416 1 + 81552678 T i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 5684 1 - 11509 T i rheMac8.chrUn_NW_015079380v1 C 0 I 1 s macNem1.NW_012011978v1 1503147 1 + 3644372 T i macNem1.NW_012011978v1 C 0 I 1 s cerAty1.NW_012000820v1 1458097 1 - 10304083 T i cerAty1.NW_012000820v1 C 0 I 1 s manLeu1.NW_012103754v1 1029718 1 - 2200435 T i manLeu1.NW_012103754v1 C 0 I 1 s colAng1.NW_012118821v1 1456015 1 - 13651311 T i colAng1.NW_012118821v1 C 0 I 1 s dasNov3.JH576208 1802530 1 + 4416731 C i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 186303 0 + 287728 C e saiBol1.JH378218 1273981 0 - 7082604 C e cebCap1.NW_016107827v1 1368488 0 + 1864846 C e otoGar3.GL873658 965825 540 + 5252280 I e calJac3.chr14 1444797 0 - 108792865 C e chlSab2.chr14 1537289 0 - 107702431 C e macFas5.chr13 1474959 0 - 111193037 C e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=1704.000000 s hg38.chr2_KI270774v1_alt 194398 6 + 223625 -ATTTCC s gorGor5.CYUI01015607v1 1453914 6 + 1464242 -ATTTCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1180417 6 + 81552678 -ATTTCC i nomLeu3.chr19 C 0 C 0 s dasNov3.JH576208 1802531 6 + 4416731 AATTTC- i dasNov3.JH576208 C 0 I 16 e aotNan1.NW_018513311v1 186303 0 + 287728 C e saiBol1.JH378218 1273981 0 - 7082604 C e cebCap1.NW_016107827v1 1368488 0 + 1864846 C e otoGar3.GL873658 965825 540 + 5252280 I e calJac3.chr14 1444797 0 - 108792865 C e colAng1.NW_012118821v1 1456016 1 - 13651311 I e manLeu1.NW_012103754v1 1029719 1 - 2200435 I e chlSab2.chr14 1537289 0 - 107702431 C e cerAty1.NW_012000820v1 1458098 1 - 10304083 I e macNem1.NW_012011978v1 1503148 1 + 3644372 I e macFas5.chr13 1474959 0 - 111193037 C e rheMac8.chrUn_NW_015079380v1 5685 1 - 11509 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=53312.000000 s hg38.chr2_KI270774v1_alt 194404 221 + 223625 TGCAtc-----------ttttttttttttgagacggagtctcgctctgtcgcctagactggagtgcagtggcgcgatctcagcccactgcaagctccacctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacgcccggctaatttttgtttttgtatttttagtagagacggggtttcaccatgttagccaggatg s gorGor5.CYUI01015607v1 1453920 215 + 1464242 TGCATC-----------ttttttttttttgagatggagtctcgctctgtcgcctagactggagtgcagtggcgc-atctcagctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcctgagtggctgggactacaggcacccgccaccatgcccggctaattttt-----tgtatttttagtagagacggggtttcaccatgttagccaggatg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1180423 232 + 81552678 TGCAtctttttttttttttttttttttttgagacggagtctcgctctgtcgcccaggctggagtgcagtgctgcaatgtcagctcactgcaagctccgcctcccgggttcatgccattctcctgcctcagccccctgagtagctgggactacaggcgcccgccactacgccctgctaatttttgtttttctatttttagtagagatggggtttcaccgtgttagccaggatg i nomLeu3.chr19 C 0 C 0 e aotNan1.NW_018513311v1 186303 0 + 287728 C e saiBol1.JH378218 1273981 0 - 7082604 C e cebCap1.NW_016107827v1 1368488 0 + 1864846 C e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1802537 16 + 4416731 I e calJac3.chr14 1444797 0 - 108792865 C e colAng1.NW_012118821v1 1456016 1 - 13651311 I e manLeu1.NW_012103754v1 1029719 1 - 2200435 I e chlSab2.chr14 1537289 0 - 107702431 C e cerAty1.NW_012000820v1 1458098 1 - 10304083 I e macNem1.NW_012011978v1 1503148 1 + 3644372 I e macFas5.chr13 1474959 0 - 111193037 C e rheMac8.chrUn_NW_015079380v1 5685 1 - 11509 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=4853.000000 s hg38.chr2_KI270774v1_alt 194625 2 + 223625 TA s gorGor5.CYUI01015607v1 1454135 2 + 1464242 TA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1180655 2 + 81552678 TA i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1474959 2 - 111193037 TG i macFas5.chr13 C 0 C 0 s chlSab2.chr14 1537289 2 - 107702431 TA i chlSab2.chr14 C 0 C 0 s calJac3.chr14 1444797 2 - 108792865 TA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1273981 2 - 7082604 TG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1368488 2 + 1864846 TA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 186303 2 + 287728 TA i aotNan1.NW_018513311v1 C 0 C 0 e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1802537 16 + 4416731 I e colAng1.NW_012118821v1 1456016 1 - 13651311 I e manLeu1.NW_012103754v1 1029719 1 - 2200435 I e cerAty1.NW_012000820v1 1458098 1 - 10304083 I e macNem1.NW_012011978v1 1503148 1 + 3644372 I e rheMac8.chrUn_NW_015079380v1 5685 1 - 11509 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=186963.000000 s hg38.chr2_KI270774v1_alt 194627 23 + 223625 TTTCCTACATCTTAAGGACTCTT s gorGor5.CYUI01015607v1 1454137 23 + 1464242 TTTCCTACATCTTAAGGACTCTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1180657 23 + 81552678 TTTCCTACATCTTAAGGACTCTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 5686 23 - 11509 TTTCCTACATCTTAAGGACTCTT i rheMac8.chrUn_NW_015079380v1 I 1 C 0 s macFas5.chr13 1474961 23 - 111193037 TTTCCTACATCTTAAGGACTCTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1503149 23 + 3644372 TTTCCTACATCTTAAGGACTCTT i macNem1.NW_012011978v1 I 1 C 0 s cerAty1.NW_012000820v1 1458099 23 - 10304083 TTTCCTACATCTTAAGGACTCTT i cerAty1.NW_012000820v1 I 1 C 0 s chlSab2.chr14 1537291 23 - 107702431 TTTCCTACATCTTAAGGACTCTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1029720 23 - 2200435 TTTCCTACATCTTAAGGACTCTT i manLeu1.NW_012103754v1 I 1 C 0 s colAng1.NW_012118821v1 1456017 23 - 13651311 TTTCCTACATCTTAAGGACTCTT i colAng1.NW_012118821v1 I 1 C 0 s calJac3.chr14 1444799 23 - 108792865 TTTCCTACATCTTAAGGATTCTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1273983 23 - 7082604 TTTCCTACATCTTAAGGATTCTT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1368490 23 + 1864846 TTTCCTACGTCTCAAGGATTCTT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 186305 23 + 287728 TTTCCTACACCTTAAGGATTCTT i aotNan1.NW_018513311v1 C 0 C 0 e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1802537 16 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=134307.000000 s hg38.chr2_KI270774v1_alt 194650 18 + 223625 TTCTATAAACGCTGAAGC s gorGor5.CYUI01015607v1 1454160 17 + 1464242 T-CTATAAACACTGAAGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1180680 18 + 81552678 TTCTATAAACGCTGAAGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 5709 18 - 11509 TTCTATAAACCTTGAAGT i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1474984 18 - 111193037 TTCTATAAACCTTGAAGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1503172 18 + 3644372 TTCTATAAACCTTGAAGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1458122 18 - 10304083 TTCTATAAACCCTGAAGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1537314 18 - 107702431 ATCTATAAACCCTGAAGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1029743 18 - 2200435 TTCTATAAACCCTGAAGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1456040 18 - 13651311 TTCCATAAACTCTGAAGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1444822 18 - 108792865 TTCTGTAAACCCTGAAGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1274006 18 - 7082604 TTCTGTAAACCCTGAAGC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1368513 18 + 1864846 TTCTGTAAACCCTGAAGC i cebCap1.NW_016107827v1 C 0 I 4 s aotNan1.NW_018513311v1 186328 18 + 287728 TTCTGTAAACCCTGAAGC i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1802553 18 + 4416731 TTCTATAAACCCTAGAAC i dasNov3.JH576208 I 16 C 0 e otoGar3.GL873658 965825 540 + 5252280 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=152353.000000 s hg38.chr2_KI270774v1_alt 194668 24 + 223625 CAAATGTGTCTCTAGAGTTGAGAC s gorGor5.CYUI01015607v1 1454177 24 + 1464242 CAAATGTGTCTCTAGAGTTGAGAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1180698 24 + 81552678 CAAATGTGTCTCTAGAGTTGAGAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 5727 24 - 11509 CAAATGTGTCTCTGGAGTTGAGAC i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1475002 24 - 111193037 CAAATGTGTCTCTGGAGTTGAGAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1503190 24 + 3644372 CAAATGTGTCTCTGGAGTTGAGAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1458140 24 - 10304083 CAAATGTGCCTCTGGAGTTGAGAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1537332 24 - 107702431 CAAATGTGTCACTGGAGTTGAGAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1029761 24 - 2200435 CAAATGTGTCTCTGGAGTTGAGAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1456058 24 - 13651311 CAAATGTGTCTCTGGAGTTGAGAC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1444840 24 - 108792865 CAGATGTGTCTCTAGAGTTGAGAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1274024 5 - 7082604 -------------------GAAAC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 186346 24 + 287728 CAAATGTGTCTCTAGAGTTGAGAC i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1802571 24 + 4416731 CAAACTTGTTTCTTGGATTGAAAC i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1368531 4 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=605023.000000 s hg38.chr2_KI270774v1_alt 194692 78 + 223625 GTTCCCTCCCAGTGCTACCTCTTTGCTAAGG--AATCCTCCTGCCTGG-ACACTGTC-CATCTGCCTCTCCAGATCCTGCCC s gorGor5.CYUI01015607v1 1454201 78 + 1464242 ATTCCCTCCCAGTGCTACCTCTTTGCTAAGG--AATCCTCCTGCCTGG-ACGCTGTC-CATCTGCCTCTCCAGATCCTGCCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1180722 78 + 81552678 GTTCCCTCCCAGTGCTACCTCTTTGCTCAGG--AATCCTCCTGCCTGG-ACGCTGTC-CATCTGCCTCTCCAGGTCTTGCAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 5751 78 - 11509 GTTCCCTCCCAGTGCTACCTCTTTGCTAAGG--AATCCCCCTGCCTGG-ACGCCGTC-CATCTGCCTCTCCAGGTCTTGCCC i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1475026 78 - 111193037 GTTCCCTCCCAGTGCTACCTCTTTGCTAAGG--AATCCCCCTGCCTGG-ACGCCGTC-CATCTGCCTCTCCAGGTCTTGCCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1503214 78 + 3644372 GTTCCCTCCCAGTGCTACCTCTTTGCTAAGG--AATCCCCCTGCCTGG-ACGCCGTC-CATCTGCCTCTCCAGGTCTTGCCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1458164 78 - 10304083 GTTCCCTCCCAGTGCTACCTCTTTGCTAAGG--AATCCCCCTGCCTGG-ACGCCGTC-CATCTGCCTCTCCAGGTCTTGCCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1537356 78 - 107702431 ATTCCCTTCCAGTGCTACTTCTTTGCTAAGG--AATCCTCCTGCCTGG-ACGCCGTC-CATCTGCCTCTCCAGGTCCTGCCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1029785 78 - 2200435 GTTCCCTCCCAGTGCTACCTCTTTGCTAAGG--AATCCCCCTGCCTGG-ACGCCGTC-CATCTGCCTCTCCAGGTCTTGCCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1456082 78 - 13651311 GTTCCCTCCCAGTGCTACCTCTTTGCTAAGG--AATCCCCCTGCCTGG-ACTCCATC-CAACTGCCTCTCCAGGTCCTGCCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1444864 75 - 108792865 GTTCCCTCCTAGTGCCACCTCTTTG---AGG--AATGCCCCTGCCTGG-GTGCCGTC-CGTCTGCCTCTCCAGGTCCTGCCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1274029 78 - 7082604 ATTCCCTCCCAGTGCCACCTCTCTGCTCAGG--AATGCCCCTGCCTGG-ACGCCGTC-CATCTGCCTCTCCAGGCCCTGCCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1368535 78 + 1864846 GTTCCCTCCCAGTGCCACCTCTCTGCTCAGG--AATGTCCCTGCCTGG-ACACAGTC-TGTCTGCCTCTCCGGGTCCTGCCC i cebCap1.NW_016107827v1 I 4 C 0 s aotNan1.NW_018513311v1 186370 78 + 287728 GTTCCCTCCCAGTGCCACCTCTTGGCTCAGG--AGTGCCCCTGCCTGG-ACGCCATC-CATCCACCTCCCCAGGTCCTGCCC i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1802595 82 + 4416731 ATATTCTTCCACAGCCACATCTCTGCTTATGATAGTTCTCTCACTTGGAATGCCCTCTCCCCCGTGTCTCTAAGTCCTGGCC i dasNov3.JH576208 C 0 I 1373 e otoGar3.GL873658 965825 540 + 5252280 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=9100.000000 s hg38.chr2_KI270774v1_alt 194770 1 + 223625 C s gorGor5.CYUI01015607v1 1454279 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1180800 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 5829 1 - 11509 C i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1475104 1 - 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1503292 1 + 3644372 C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1458242 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1537434 1 - 107702431 C i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1029863 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1456160 1 - 13651311 C i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1444939 1 - 108792865 C i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1274107 1 - 7082604 C i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1368613 1 + 1864846 C i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 186448 1 + 287728 C i aotNan1.NW_018513311v1 C 0 I 12 e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1802677 1373 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=2585.000000 s hg38.chr2_KI270774v1_alt 194771 1 + 223625 C s gorGor5.CYUI01015607v1 1454280 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1180801 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 5830 1 - 11509 C i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1475105 1 - 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1503293 1 + 3644372 C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1458243 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1537435 1 - 107702431 T i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1029864 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1456161 1 - 13651311 C i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1444940 1 - 108792865 A i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1274108 1 - 7082604 C i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1368614 1 + 1864846 C i cebCap1.NW_016107827v1 C 0 I 11 e aotNan1.NW_018513311v1 186449 12 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1802677 1373 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=47089.000000 s hg38.chr2_KI270774v1_alt 194772 13 + 223625 GCCAAGGGCGTCC s gorGor5.CYUI01015607v1 1454281 13 + 1464242 ACCAAGGGCATCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1180802 13 + 81552678 ACCAAGGGCGTCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 5831 13 - 11509 ATCAAGGGCGTCC i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1475106 13 - 111193037 ATCAAGGGCGTCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1503294 13 + 3644372 ATCAAGGGCGTCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1458244 13 - 10304083 GTCAAGGGCGTCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1537436 13 - 107702431 GTCAAGGGCGTCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1029865 13 - 2200435 GTCAAGGGCGTCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1456162 13 - 13651311 GTCAAGGGCGTCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1444941 11 - 108792865 -TGAAGTGTGTT- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1274109 11 - 7082604 -CGAAGCGTGTT- i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 186449 12 + 287728 I e cebCap1.NW_016107827v1 1368615 11 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1802677 1373 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=1661038.000000 s hg38.chr2_KI270774v1_alt 194785 224 + 223625 GAGAGAGCCCCTGAGCCCGGCCCGGACCAGCGCCC-----------GTGCTCAGGGCAGCTGTGCGCTCCGCGCTGCCTTCTGGTTCTGTGTGATGGATGTGATGCTTGCATGGTGCTGTCCCTGCCCCGCTCCGCCCCTGCTGGGCTCCTGGCTGCCGAACCTGAAGTCAGGGTCCGCCGCAGAACAC--GTCTTCCCGCTGAGCCCTGCAGCCCCTCAAGCAGCTGGCTGCCTCC s gorGor5.CYUI01015607v1 1454294 235 + 1464242 GAGAGAGCCCCTGAGCCCGGCCCGGACCAGCGCCCATGCAGTGCCCGTGCTCAGGGCAGCTGTGCGCTCCATGCTGCCTTCTGGTTCTGTGTGGTGGATGTGATGGTTGCATGGTGCTGTCCCTGCCCCGCTCCGCCCCTGCTGGGCTCCTGGCTGCCGAACGTGAAGTCAGGGTCTGCCGCAGAACAC--GTCTTCCCGCTGAGCCCTGCAGCCCCTCAAGCAGCTGGCTGCCTCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1180815 234 + 81552678 GAGAGAGACCCTGAGCCCGGCCCGGACCAGCGCCCATGCAGTGCCCGTGCTCAGGGCAGCTCTGAGCTCCGCGTTGCCTTCTGGTTCTGTGCAGTGGATGTGATG-TTGCATGGTGCTGTCCCTGCCCCGCTCCGCCCCTGCTGGGCTCCTGGCTGCTGAACGTGAAGTCAGGGTCCGTGGCAGAACAC--ATCTTCCCGCTGAGCCCTGCAGCCCCTCAAGCAGCTGGCTGCCTCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 5844 237 - 11509 GAGAGAACCCCTGAGCCCAGCCCGGACCAGCGCCCATGCAGTGCCCGTGCTCAGGGCAGCTCTGAGCTCCGCACTGCCTTCTGGTTCTGTGCGGTGGATGTGATGATTGCATGGTGCTGTCCCTGCCCCGCTCTGCCCCTGCTGGGCTCCTGGCTGCCGAATGTGAAGTCAGGGTCCACCGCAGAACACTTGTCTTCCTGCTGAGCCCTGCAGCCCCTCAAGCAGCTGGCTGCCTCC i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1475119 237 - 111193037 GAGAGAACCCCTGAGCCCAGCCCGGACCAGCGCCCATGCAGTGCCCGTGCTCAGGGCAGCTCTGAGCTCCGCACTGCCTTCTGGTTCTGTGCGGTGGATGTGATGATTGCATGGTGCTGTCCCTGCCCTGCTCTGCCCCTGCTGGGCTCCTGGCTGCCGAATGTGAAGTCAGGGTCCACCGCAGAACACTTGTCTTCCTGCTGAGCCCTGCAGCCCCTCAAGCAGCTGGCTGCCTCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1503307 237 + 3644372 GAGAGAACCCCTGAGCCCAGCCCGGACTAGCGCCCATGCAGTGCCCGTGCTCAGGGCAGCTCTGAGCTCCGCACTGCCTGCTGGTTCTGTGCGGTGGATGTGATGATTGCATGGTGCTGTCCCTGCCCTGCTCTGCCCCTGCTGGGCTCCTGGCTGCCGAATGTGAAGTCAGGGTCCACCGCAGAACACTTGTCTTCCTGCTGAGCCCTGCAGCCCCTCAAGCAGCTGGCTGCCTCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1458257 237 - 10304083 GAGAGAACCCCTGAGCCCGGCCCGGACCAGCGCCCATGCAGTGCCCGTGCTCAGGGCAGCTGTGAGCTCCGCGCTGCCTTCTGGTTCTGTGCGGTGGATGTGATGATTGCATGGTGCTGTCCCTGCCCTGCTCTGCCCCTGCTGGGCTCCTGGCTGCTGAACGTGAAGTCAGGGTCCACCGCAGAACACTTGTCTTCCTGCTGAGCCCTGCAGCCCCTCAAGCAGCTGGCTGCCTCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1537449 236 - 107702431 GAGAGAACCCCTGAGCCCGGCACAGACCAGCGCCCATGCAGTGCCCGTGCTCAGGGCAGCTCTGAGCTCTGCACTGCCTTCTGGTTCTGTGCGGTGGATGTGACGATTGCATGGTGCTGTCCCTGCCCCGCTCTACTTGTGCTGGGCTCCTGGCTGCCAAACGTGAAGTCAGGGTCCACCGCAGGACACTCGTCTTCCTGCTGAGACCTGCAGCCCCTCAGGCAGCT-GCTGCCTCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1029878 237 - 2200435 GAGAGAACCCCTGAGCCCGGCCCGGACCAGCGCCCATGCAGTGCCCGTGCTCAGGGCAGCTCTGAGCTCCGCGCTGCCTGCTGGTTCTGTGTGGTGGATGTGATGATTGCATGGTGCTGTCCCTGCCCTGCTCTGCCCCTGCTGGGCTCCTGGCTGCTGAACGTGAAGTCAGGGTCCACCGCAGAACACTCGTCTTCCTGCTGAGCCCTGCAGCCCCTCAAGCAGCTGGCTGCCTCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1456175 237 - 13651311 GAGAGAACCCCTGAGCCTGGCCCGGACCAGCACCCATGCAGTGCCTGTGCTCAGGGCAGCTCTGAGCTCTGTGCTGCCTTCTGGTTCTGTGCAGTGGGTGTGATGATTGCATGGTGCTGTCCCTGCCCCGCTCTGCCCCTGCTGGGCTCCTGGCTGCCGAACGTGAAGTAAGGGTCCACCGCAGGACACTTGTCTTCCTGCTGAGCCCTGCAGCCCCTCAAGCAGCTGGCTGCCTCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1444952 237 - 108792865 GAGAGAGCCCCCAAGCCTGGCCGGGACCAGCACTCATGCGGTGCTGGTGCTCAGGGCAGCTCTGAGCTCCCCTGTGCTGTGTGGTTCTGTGTGGTGGGAGCGATGCCTGCTCAGTGCTGTGCCTATCCCGCCCTGCCCCCGCCGGGCTCCTGGCTGCCAGATGTGAACTCAGGGTCCACCGAAGAACACTGGTCTTCCCGCTGAGCCTTGCAGCCCCTCAAGCAGCTGGCTGCCTCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1274120 233 - 7082604 GAAAGAGCCCCCGTGCCCGGCCCGGAGCAGCACTCATGTGGTGCTCATGCTCAGGGCAGCTCTGAGCTCCACCTTGCC---TGGTTCTGTGTGGTGGGTGCGATGCTTGCTCAGGGCTGTCCCCATCCCACCCTGACCCCACCAGGCTCCTGGCTGCC-GAAGTGAAGTCAGGGTCCACCGCAGAACCCTGGTCTTCCCGCTGAGCCCTGCAGCCTCTCAAGCAGCTGGCTGCCTCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1368626 236 + 1864846 GAAAGAGCCCCCGAGCCCGGCCCGGACCAGCACTCGTGTGGTGCTCGTGCTCAGGGCAACTCTGAGCTCCACGTTGCCTTCTGGTTTTGTGTGGTGGGTGCGATGCTTGCTCAGCGCTGTCCCCGTCCTGCCCTGCCCCCGCCGGGCTCCTGCCTGCC-GATGTGAAGTCAGTGTCCACCGCAGAGCCCTGGTCTTCCCACTGAGCCTTGCAGCCCCTCGAGCAGCTGGCTGCCTCC i cebCap1.NW_016107827v1 I 11 C 0 s aotNan1.NW_018513311v1 186461 237 + 287728 GAGAGAGCCCCCGAGCCCGGCCGGGACCAGCACTCACGCGGTGCTCGTGCTCAGGGCAGCTCTGAGCTCCATGTTGCCTTCTGGTTCTGTGTGGTGGGTGCGATGCTTGCTCAGTGCTGTCCCCCTCCAGCCTGGCCCCCGCCGGGCTCCTGGCTGCCGGATGTGAAGTCAGGGTCCACCGCAGAACACTGGTCTTCCCGCTGAGCCCTGCAGCCCCTCACGCAGCTGGCTGCCTCC i aotNan1.NW_018513311v1 I 12 I 17 e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1802677 1373 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=230610.000000 s hg38.chr2_KI270774v1_alt 195009 53 + 223625 GAGGAGCTTCCTCTCCGACAGCTGC---------------CGTGT------ACCTCCCTG-ACCTCCCTGGCTGT s gorGor5.CYUI01015607v1 1454529 43 + 1464242 GAGGAGCTTCCTCTCCAACAGCTGC---------------CGTGT------ACCTCCCTG----------GCAG- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1181049 43 + 81552678 GAGGAGTTTCCTCTCCAACAGCTGC---------------CCTGT------ACCTCCCTG----------GCAG- i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 6081 51 - 11509 -AGGAGTCTCCTCTCCAACAGCTGC---------------CCTGT------GCCTCCCTG-GCCTCCCTGGCAG- i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1475356 51 - 111193037 -AGGAGTCTCCTCTCCAACAGCTGC---------------CCTGT------GCCTCCCTG-GCCTCCCTGGCAG- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1503544 51 + 3644372 -AGGAGTCTCCTCTCCAACAGCTGC---------------CCTGT------GCCTCCCTG-GCCTCCCTGGCAG- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1458494 42 - 10304083 -AGGAGTCTCCTCTCCAACAGCTGC---------------CCTGT----------------GCCTCCCTGGCAG- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1537685 73 - 107702431 -AGGAGTCTCCTCTCCAACAGCTGCTGCCTCCAGGAGTCTCCTCTCCAACAGCTGCCCTGTGCCTCCCTGGCAG- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1030115 51 - 2200435 -AGGAGTCTCCTCTCCAACAGCTGC---------------CCTGT------GCCTCCCTG-GCCTCCCTGGCAG- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1456412 51 - 13651311 -AGGAGTCTCCTCTCCAACAGCTGC---------------CCTGT------GCCTCCCTG-GCCTCCCTGGCAG- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1445189 50 - 108792865 GAGGAGTTTCCTCTCCAAC--CTGC---------------CCTGC------ACCTCCCTG-GCCCTTCTGGCAG- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1274353 50 - 7082604 CGGGAGTTTCGCCTCCAAC--CTGC---------------CCTGC------ACCTCCCTG-GCTGTTCTGGCAG- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1368862 50 + 1864846 GAGGAGGTTCCTCTCCAAC--CTGC---------------CCTGC------ACCTCCCTG-GCTGTTCTGGCAG- i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 186698 17 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1802677 1373 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=493777.000000 s hg38.chr2_KI270774v1_alt 195062 71 + 223625 GACTCAGGCCCTCCGGAGGCACTGGGCCAGGCCGCCGGTGGAGCCTGATGGTGGACGATGGTGGACAGTGA s gorGor5.CYUI01015607v1 1454572 71 + 1464242 GACCCAGGCCCTCCGGAGGCACTGGGCCAGGCCGCCGGTAGAGCCTGATGGTGGACGATGGTGGACAGTGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1181092 71 + 81552678 GACCCAGGCCCTCCAGAGGCACTGGGCCAGGCCGCCGGTAGAGCCTGATGGTGGACGATGGTGGACAGTGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 6132 71 - 11509 GACCCAGGCCCTCTGGAGGCACTGGGCCGGGCCGCCGGTGGAGCCTGATGGGGAGCGATGGTGGACAGTGA i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1475407 71 - 111193037 GACCCAGGCCCTCTGGAGGCACTGGGCCGGGCCGCCGGTGGAGCCTGATGGGGAGCGATGGTGGACAGTGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1503595 71 + 3644372 GACCCAGGCCCTCTGGAGGCACTGGGCCGGGCTGCCGGTGGAGCCTGATGGGGAGCGATGGTGGACAGTGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1458536 71 - 10304083 GACCCAGGCCCTCTGGAGGCACTGGGCCGGGCCGCCGGTGGAGCCTGATGGGGAGCGATGGTGGACAGTGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1537758 64 - 107702431 GACCCAGGCCCTCTGGAGGCACTGGGCCGGGCCACTGGTGGAGCCGGATGGGGAGC-------GACAGTGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1030166 71 - 2200435 GACCCAGGCCCTCTGGAGGCACTGGGCCGGGCCACCGGTGGAGCCTGATGGGGAGCGATGGTGGACAGTGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1456463 71 - 13651311 TACCCAGGCCCTCTGGAGGCACTGGGCCGGGCCGCCGGTGGAGCCTGATGGGGAGCGATGGTGGACAGTGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1445239 71 - 108792865 GACCCAGGCTGCCCGGAGGCACAGAACCAGGCTGCTGGTGGAGCCTGATGGTGGACAAAGGTGAACAGTGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1274403 71 - 7082604 GACCCAGGCCATCCGGAGGCACAGGACCAGGCTGCTGGTGGAGCCTCATGGTGGACAAAGGTGAACAGTGA i saiBol1.JH378218 C 0 I 321 s cebCap1.NW_016107827v1 1368912 71 + 1864846 GACCCAGGCCATCAGAAGGCACAGGACCAGGCTGCTGGTGGAGCCTGATGGTGGACAAAGGTGAACAGTGA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 186715 71 + 287728 GACCCAGGCCGTCCGGAGGCACAGGACCAGGCTGCTGGTGGAGCCTGATGGTTGGCAAAGGTGAACGGTGA i aotNan1.NW_018513311v1 I 17 C 0 e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1802677 1373 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=7800.000000 s hg38.chr2_KI270774v1_alt 195133 1 + 223625 C s gorGor5.CYUI01015607v1 1454643 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1181163 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 6203 1 - 11509 C i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1475478 1 - 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1503666 1 + 3644372 C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1458607 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1537822 1 - 107702431 C i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1030237 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1456534 1 - 13651311 C i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1445310 1 - 108792865 C i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107827v1 1368983 1 + 1864846 C i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 186786 1 + 287728 C i aotNan1.NW_018513311v1 C 0 C 0 e saiBol1.JH378218 1274474 321 - 7082604 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1802677 1373 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=797508.000000 s hg38.chr2_KI270774v1_alt 195134 122 + 223625 CTTCTCCTTCTAAGGAAGGGACTGAGGGAGGGAAAGTGCCCCCAGAGCATCTCAGGAGCTGGGAGGTGAACAGCTGGGGATGC--TGGCTTCAGTGC----TTC-CCCCACCACCAGCACCCTTATGAT s gorGor5.CYUI01015607v1 1454644 126 + 1464242 CTTCTCCTTCTAAGGAAGGGACTGAGGGAGGGAAAGTGTCCCCAGAGCATCTCAGGAGCTGGGAGGTGAACAGCTGGGGATGC--TGGCTTCAGTGCATGCTTC-CCCCACCACCAGCACCCTTATGAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1181164 123 + 81552678 ---CTCTTTCTAAGGAAGGGACTGAGGGAGGGAAAGTGCCCCCAGAGCATCTCAGGAGCTGGGAGGCGAAAAGCTGGGGATGC--TGGCTTCAGTGCATGCTTC-CCCCAACACCAGCACCCTTATAAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 6204 114 - 11509 CTTCTCTTTCTAAGGAAGAGACTGAGGGAGGGAAAGTGCCCCCAGAGCATCTCAGGAGCTGGGAGGTGAACAGCTGGGGATGC--AAGC------------TTC-CCCCACCAGCAGCACCCTTGTAAT i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1475479 114 - 111193037 CTTCTCTTTCTAAGGAAGAGACTGAGGGAGGGAAAGTGCCCCCAGAGCATCTCAGGAGCTGGGAGGTGAACAGCTGGGGATGC--AAGC------------TTC-CCCCACCAGCAGCACCCTTGTAAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1503667 114 + 3644372 CTTCTCTTTCTAAGGAAGAGACTGAGGGAGGGAAAGTGCCCCCAGAGCATCTCAGGAGCTGGGAGGTGAACAGCTGGGGATGC--AAGC------------TTC-CCCCACCAGCAGCACCCTTGTAAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1458608 114 - 10304083 CTTCTCTTTCTAAGGAAGAGACTGAGGGAGGGAAAGTGCCCCCAGAGCATCTCAGGAGCTGGGAGGTGAACAGCTGGGGATGC--AAGC------------TTC-CCCCACCAGCAGCACCCTTGTAAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1537823 116 - 107702431 CTTCTCTTTCTAAGGAAGAGACTGAGGGAGGGAAAGTACCCCCAGAGCATCTCAGGAGCTGGGAGGTGAACAGCTGGGGATGCAAAAGC------------TTC-CCCCACCACCAGCACCCTTGTAAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1030238 114 - 2200435 CTTCTCTTTCTAAGGAAGAGACTGAGGGAGGGAAAGTGCCCCCAGAGCATCTCAGGAGCTGGGAGGTGAACAGCTGGGGATGC--AAGC------------TTC-CCCCACCAGCAGCACCCTTGTAAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1456535 114 - 13651311 TTTCTCTTTCTAAGGAAGAGACTGAGGGAGGGAAAGTGCCCCCAGAGCATCTCAGGAGCTGGAGGGTGAACAGCTGGGGATGC--AAGC------------TTC-CCCCACCACCAGCACCCTTATAAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1445311 124 - 108792865 CTTCTCTTTCTAAGGAAGGGACTGAGAGAGGGAAAGCGCCCCCAGGGCGTCTCAGGAGCCGGGAGGTGAACAGCAGGGGTCGC--TGGCTTCTGTGCTGG-TTG--CCCATCACCAGCACCCTTATAAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1274795 125 - 7082604 CTTCTCTTTCTAAGGAAGGGACTGAGAGAGGGAAAGGGCCCCCAGAGCATCTCAGGAGCCAGGAGGCGAACAGCAGGAGATGC--TGGCTTCTGTGCAGG-CTG-CCCCACCACCAGCACCCTTGTAAA i saiBol1.JH378218 I 321 C 0 s cebCap1.NW_016107827v1 1368984 126 + 1864846 CTTCTCTTTCTAAGGAAGGGGCTGAGAGAGGGAAGGGGCCCCCAGAGCATCTCAGGAGCCGGGAGGTGAACAGCAGGGGACGC--TGGCTTCTGTGCAGG-CTGCCCCCACCACCAGCACCCTTATAAA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 186787 118 + 287728 CTTCTCCTTCTAAGGAAGGGACTGAGAGAAGGAAAGGGCCCCCAGAGCATCTCAGGAGCCGGGAGGCGAACAGCAGGGGGCGC--TGGCTTCTGTGCGGT-TCC-CCCCACCA-------CCTTATAAA i aotNan1.NW_018513311v1 C 0 C 0 e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1802677 1373 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=479824.000000 s hg38.chr2_KI270774v1_alt 195256 70 + 223625 TATACTGCTGCCCCTGCAAAAATGACCATGGAAAATTAGGATGCTGGGCATG-----ACCTTTCTGCATCCCTGA s gorGor5.CYUI01015607v1 1454770 70 + 1464242 TATACTGCTGCCCCTGCAAAAATGTCCATGGAAAATTAGGACGCTGGACATG-----ACCTTTCTGCATCCCTGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1181287 65 + 81552678 TATAC-----CCCCTGCAAAAACGACCATGGAAAATTAGGACGCTGAGCATG-----ACCTTTCTGCATCCCTGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 6318 70 - 11509 GACACTGCTGCCTCTGCAAAATCGTCCGCGGAAAATTAGGATGCTGGGCATG-----ACCTTTCTGCATCCCTGA i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1475593 70 - 111193037 GACACTGCTGCCCCTGCAAAATCGTCCGCGGAAAATTAGGATGCTGGGCATG-----ACCTTTCTGCATCCCTGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1503781 70 + 3644372 GACACTGCTGCCCCTGCAAAATCGTCCGCGGAAAATTAGGATGCTGGGCATG-----ACCTTTCTGCATCCCTGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1458722 70 - 10304083 GACACTGCTGCCCCTGCAAAATCGTCCGCGGAAAATTAGGATGCTGGGCATG-----ACCTTTCTGCATCCCTGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1537939 69 - 107702431 GACACTGCTG-CCCTGCAAAATCGTCCGCGGAAAATTAGGATGCTGGGCATG-----ACCTTTCTGCATCCCTGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1030352 70 - 2200435 GACCCTGCTGCCCCTGCAAAATCGTCCGCGGAAAATTAGGATACTGGGCATG-----ACCTTTCTGCATCTCTGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1456649 70 - 13651311 GACACTGCTTCCCCTGCAAAATCGTCCGCGGAAAATTAGGATGCTGGCCATG-----ACCTTTCTGCATCCCTGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1445435 75 - 108792865 TATGCTGCTGCCCCTGCACAACCTTCCACGGAAAATTAGGACGCTGGGCATGACCCTACCTTTCTGCATCCCTGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1274920 74 - 7082604 TACACTGCTG-CCCTGCACAGCCTTCCACGGAAAATTAGGACGCTGGGCATGAACCCACCTTTCTGCATCCCTGA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1369110 75 + 1864846 TACACTGCTGCCCCTGCACAGCCTTCCACGGAAAATTAGGACGCTGGGCATGACCCCACCTTTCTGCATCCCTGA i cebCap1.NW_016107827v1 C 0 I 85 s aotNan1.NW_018513311v1 186905 75 + 287728 CACAGTGCTGCCCCTGCACAACCTTCCACGGAATATTAGGGCGCTGGGCATGACCCTACCTTTCTGCATCCCTGA i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1804050 75 + 4416731 tgcatcactgcccGCACATGAACTTCCATATTCGTCCAGGATTTAGGGACTAGGATTACATTTCTGCATCCCCAG i dasNov3.JH576208 I 1373 C 0 e otoGar3.GL873658 965825 540 + 5252280 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=496141.000000 s hg38.chr2_KI270774v1_alt 195326 76 + 223625 CGCACAAGCCTAACTGT--TGTTGCACGGAGGCCACACACGTCCCTGATGAAAGA--GCCCTGCTCCCGTGCAAGCAGCC s gorGor5.CYUI01015607v1 1454840 76 + 1464242 CACACAAGCCTAACTGT--TGTTGCACGGAGGCCACACACGTCCCTGATGAAAGA--GCCCTGCTCCCTCGCAAGCAGCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1181352 76 + 81552678 CGCACAAGTCTAACTGT--TGTTGCATGGAGGCCACACATGTCCCTGATGAAAGA--GCCCTGCTCCTGCACAAACAGCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 6388 76 - 11509 TGCACAAGCCTAACTGT--TGTTCCACGGAGGCCACATATGTCCCTGTTGAAAGG--GCCCTGCTCCCACGCAAGCAGCC i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1475663 76 - 111193037 TGCACAAGCCTAACTGT--TGTTCCACGGAGGCCACATATGTCCCTGTTGAAAGG--GCCCTGCTCCCACGCAAGCAGCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1503851 76 + 3644372 TGCACAAGCCTAACTGT--TGTTCCACGGAGGCCACATATGTCCCTGTTGAAAGG--GCCCTGCTCCCACGCAAGCAGCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1458792 76 - 10304083 TGCACAAGCCTAACTGA--TGTTCCATGGAGGCCACATATGTCCCTGTTGAAAGG--GCCCTGCTCCCACGCAAGCAGCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1538008 76 - 107702431 TGCACAAGCCTAACTGT--TGTTCCACGGAGGCCACATATGTCCCTGTTGAAAGG--GCCCTGCTCCCACGCAAGCAGCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1030422 76 - 2200435 TGCACAAGCCTAACTGT--TGTTCCATGGAGGCCACATATGTCCCTGTTGAAAGG--GCCCTGCTCCCACGCAAGCAGCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1456719 76 - 13651311 TGCACAAGCCTAACTGT--TGTTCCACAGAGGCCACATATGTCCCTGTTGAAAGG--GCCCTGCTCCCACGCAAGCAGCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1445510 75 - 108792865 TGCACAAGCCTCACTGT--TGTTCTGCGGAGGCC-CACGTGGCCCTGTTGAGAGA--GCCCTGCTCCCGCACAAGCAGCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1274994 70 - 7082604 TGCACAAGCC------T--TGTTCTGCGGAGACCACACGTGTCCCTGTTGAGAGA--GCCCTACTCCCACACAAGCAGCC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 186980 76 + 287728 TGCACAAGCCTCACTGT--TGTTCTGCGGAGACCACACGTGTCCCTGTTGAGAGA--GCCCTGCTCCCGCACAAGCAGCC i aotNan1.NW_018513311v1 C 0 I 26 s dasNov3.JH576208 1804125 80 + 4416731 TGTGTGAGGCTCATTGTCATGGTTCATTTTGGCCACGCGTATTCCTGTTGAAAGACTGCCCTACTCCTGCACCAGCATCA i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1369185 85 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=-14359.000000 s hg38.chr2_KI270774v1_alt 195402 18 + 223625 GTCAGTGCCCTCTCCGTA s gorGor5.CYUI01015607v1 1454916 18 + 1464242 ATCAGTGCCCTCTCCGCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1181428 18 + 81552678 ATCAGTGCCCTGTCTGTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 6464 2 - 11509 AT---------------- i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1475739 2 - 111193037 AT---------------- i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1503927 2 + 3644372 AT---------------- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1458868 2 - 10304083 AT---------------- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1538084 2 - 107702431 AT---------------- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1030498 2 - 2200435 AT---------------- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1456795 2 - 13651311 AT---------------- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1445585 2 - 108792865 AT---------------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1275064 2 - 7082604 AT---------------- i saiBol1.JH378218 C 0 C 0 s dasNov3.JH576208 1804205 18 + 4416731 ATCACTACACTTCTGGTA i dasNov3.JH576208 C 0 I 31 e aotNan1.NW_018513311v1 187056 26 + 287728 I e cebCap1.NW_016107827v1 1369185 85 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=54152.000000 s hg38.chr2_KI270774v1_alt 195420 29 + 223625 CAGATGGCGCAGCCATCAGTGCCCTCTCT s gorGor5.CYUI01015607v1 1454934 29 + 1464242 CAGATGGCGCAGCCAGCAGTGCCCTCTCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1181446 29 + 81552678 CAGACGGCGCAGCCATCAGTGCCCTCTCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 6466 13 - 11509 ----------------CAGTGCCTTCTCC i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1475741 13 - 111193037 ----------------CAGTGCCTTCTCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1503929 13 + 3644372 ----------------CAGTGCCTTCTCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1458870 13 - 10304083 ----------------CAGTGCCTTCTCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1538086 13 - 107702431 ----------------CAGTGCCTTCTCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1030500 13 - 2200435 ----------------CAGTGCCTTCTCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1456797 13 - 13651311 ----------------CAGCGCCTTCTCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1445587 13 - 108792865 ----------------CGGTGCCATCTCG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1275066 13 - 7082604 ----------------CAGTGCCATCGTG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 187056 26 + 287728 I e cebCap1.NW_016107827v1 1369185 85 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1804223 31 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=40117.000000 s hg38.chr2_KI270774v1_alt 195449 8 + 223625 GTACAGAC s gorGor5.CYUI01015607v1 1454963 8 + 1464242 GTACAGAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1181475 8 + 81552678 GTACAGAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 6479 8 - 11509 GTACAGAC i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1475754 8 - 111193037 GTACAGAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1503942 8 + 3644372 ATACAGAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1458883 8 - 10304083 GTACAGAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1538099 8 - 107702431 GTACAGAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1030513 8 - 2200435 GTACAGAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1456810 8 - 13651311 GTACAGAC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1445600 7 - 108792865 GTAT-GAC i calJac3.chr14 C 0 I 1 s saiBol1.JH378218 1275079 7 - 7082604 GTAT-GAC i saiBol1.JH378218 C 0 I 1 s dasNov3.JH576208 1804254 8 + 4416731 ATACTGAC i dasNov3.JH576208 I 31 C 0 e aotNan1.NW_018513311v1 187056 26 + 287728 I e cebCap1.NW_016107827v1 1369185 85 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=15615.000000 s hg38.chr2_KI270774v1_alt 195457 3 + 223625 GGA s gorGor5.CYUI01015607v1 1454971 3 + 1464242 GGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1181483 3 + 81552678 GGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 6487 3 - 11509 AGC i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1475762 3 - 111193037 AGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1503950 3 + 3644372 AGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1458891 3 - 10304083 AGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1538107 3 - 107702431 AGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1030521 3 - 2200435 AGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1456818 3 - 13651311 AGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1445608 3 - 108792865 GGC i calJac3.chr14 I 1 C 0 s saiBol1.JH378218 1275087 3 - 7082604 GGC i saiBol1.JH378218 I 1 C 0 s cebCap1.NW_016107827v1 1369270 3 + 1864846 GGC i cebCap1.NW_016107827v1 I 85 C 0 s dasNov3.JH576208 1804262 3 + 4416731 AGA i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 187056 26 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=719666.000000 s hg38.chr2_KI270774v1_alt 195460 94 + 223625 GCAGGCCAGCAGGACCCAGCACTGTC-CCTGGATGCACCAGCTCTGTCACTGCTGGCTGGAACACCC-AAAAGGGTGATG-GACATGGCTG---TCCCTC s gorGor5.CYUI01015607v1 1454974 95 + 1464242 GCAGGCCAGCAGGACCCAGCACCGTC-CCTGGATGCACCAGCTCTGTCACTGCTGGACGGAATACCCCAAAAGGGTGATG-GACATGGCTG---TCCCTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1181486 91 + 81552678 ACAGGCCAAGATGACCCAGCACCATC-CCTGGATGCACCAGCTCTGTCACTGCTGGTTGCAA---CC-AAAAGGTTGATG-GACATGGCTG---TCCCTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 6490 95 - 11509 ACAGGCCAGCAGGACCCAGCACCATC-CCTGGATGCACCAGCTCTGTCACTGCTGGACAGAACACCCCAAAAGGTTGATG-GACGTGGCTG---TCCCTC i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1475765 95 - 111193037 GCAGGCCAGCAGGACCCAGCACCATC-CCTGGATGCACCAGCTCTGTCACTGCTGGACAGAATACCCCAAAAGGTTGATG-GACGTGGCTG---TCCCTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1503953 95 + 3644372 GCAGGCCAGCAGGACCCAGCACCATC-CCTGGATGCACCAGCTCTGTCACTGCTGGACAGAACACCCCAAAAGGTTGATG-GACGTGGCTG---TCCCTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1458894 95 - 10304083 GCAGGCCAGCAGGACCCAGCACCATC-CCTGGATGCACCAGCTCTGTCACTGCTGGATAGAACACCCCAAAAGGTTGATG-GACGTGGCTG---TCCCTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1538110 95 - 107702431 GCAGGCCAGCAGGACCCAGCACCATC-CCTGGACACACCAGCTCTGTCACTGTTGGACAGAACACCCCAAAAGGTTGATG-GACGTGGCTG---TCCCTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1030524 95 - 2200435 GCAGGCCAGCAGGACCCAGCACCATC-CCTGGATGCACCAGCTCTGTCACTGCTGGACAGAACACCCCAAAAGGTTGATG-GACGTGGCTG---TCCCTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1456821 95 - 13651311 GCAGGCCAGCAGGACCCAGCACCATC-CCTGGATGCACCAGCTCTGTCACTGCTGGACAGAACACCCCAAAAGGTTGATG-GACGTGGCTG---TCCCTC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1445611 95 - 108792865 GCAGGCCAGCAGGCCCCAGCACTGCC-CCTGGATGCCCCAGCTCTGTCACTGCTGGACAGAATGCCCTAAAAGGTTGGTG-GACATGGCTG---GCCCTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1275090 95 - 7082604 ACAGGCCGGCAGGACCCAGCACCGCC-CCTGGATGCCCCAGCTCTGTCACTGCTGGACAGAGCACCCTAAAGGGTTGGTG-GACACGGCTG---TCCCTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1369273 94 + 1864846 GCAGGCCAGCAGGACCCAGCACGG-C-CCTGGACGCCCCAGCGCTGTCACTGCTGCACAGGACACCCTAAAACGTTGGTG-GACACGGCTG---TCCCTC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 187082 95 + 287728 GCAGGCCGGCAGGACCCAGCACCGCC-CCTGGACGCCCCAGCTCCGTCACTGCTGGACAGAACACCCTAAAAGATTGGTG-GACACGGCTG---TCCCTC i aotNan1.NW_018513311v1 I 26 I 88 s dasNov3.JH576208 1804265 100 + 4416731 GTAGGCAGGCACGGCAGAGTGTTGTCTCTTGAACGCTCCAGTTCTGTCATTGCTGGATAGCAAGCCTTAAGTTTTTGATGAAAAATTGCTGTGATCACTC i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 965825 540 + 5252280 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=258838.000000 s hg38.chr2_KI270774v1_alt 195554 44 + 223625 AGTTTTCAGAATGACAGCGTGAAACCCAAGCCTGCCTGCATGAG s gorGor5.CYUI01015607v1 1455069 44 + 1464242 AGCTTTCAGAATGACAGCGTGAAACCCAAGCCTGCCTCCATGAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1181577 44 + 81552678 AGCTTTCAGAATGACAGCGTGAAACCCAAGGCTGCCTCCATGAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 6585 44 - 11509 AGCTTTCAGAATGACAGCTTGAATCCCGAGCCTGCTTCCATGAG i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1475860 44 - 111193037 AGCTTTCAGAATGACAGCTTGAATCCTGAGCCTGCTTCCATGAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1504048 44 + 3644372 AGCTTTCAGAATGACAGCTTGAATCCCGAGCCTGCTTCCATGAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1458989 44 - 10304083 AGCTTTCAGAATGACAGCTTGAATCCCGAGCCTGCTTCCATGAG i cerAty1.NW_012000820v1 C 0 T 3764 s chlSab2.chr14 1538205 44 - 107702431 AGCTTTCAGAATGACAGCTTGAATCCCAAGCCTGCTTCCCTGAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1030619 44 - 2200435 AGCTTTCAGAATGACAGCTTGAATCCCGAGCCTGCTTCCATGAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1456916 44 - 13651311 AGCTTTCAGAATGACAGCTTGAATCCCAAGCCTGCTTCCATGAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1445706 44 - 108792865 CACTTTCAGAATGACCAAGTGAAACATAAGTCTGCCTCCACAAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1275185 44 - 7082604 CACTTCCAGAATGATGGCGTGAAACCCAAGTCTGCCTCCACAAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1369367 44 + 1864846 CACTTTCAGAATGATGGAGTGAACCCCACGTCTGCCTCCACAAG i cebCap1.NW_016107827v1 C 0 C 0 s dasNov3.JH576208 1804365 44 + 4416731 AGCCTTCAGAGTGACAAAATAAAATTCAGGACCTCTCGCCACAG i dasNov3.JH576208 C 0 I 6 e aotNan1.NW_018513311v1 187177 88 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=175305.000000 s hg38.chr2_KI270774v1_alt 195598 36 + 223625 GAAGGGTGGACAC----AGACAGCAGCAGAGGCCTC-GGCT s gorGor5.CYUI01015607v1 1455113 34 + 1464242 GAAGGGTGGACAC----AGAGA--AGCAGTGGCCCC-GGCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1181621 32 + 81552678 GAAGTGTGGACAC----AGA----AGCAGAGGCCCC-GGCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 6629 38 - 11509 GAAGGGTGGACACCAGGAGAGA--AGCAGAGGCCCC-GGCT i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1475904 38 - 111193037 GAAGGGTGGACACCAGGAGAGA--AGCAGAGGCCCC-GGCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1504092 38 + 3644372 GAAGGGTGGACACCAGGAGAGA--AGCAGAGGCCCC-GGCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1455269 38 - 10304083 GAAGGGTGGACACCAGGAGAGA--AGCAGAGGCCCC-GGCT i cerAty1.NW_012000820v1 T 3764 C 0 s chlSab2.chr14 1538249 38 - 107702431 GAAGGGTGGACACCAGGAGAGA--AGCAGAGGCTCT-GGCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1030663 38 - 2200435 GAAGGGTGGACACCAGGAGAGA--AGCAGAGGCCCC-GGCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1456960 39 - 13651311 GAAGGGTGGACACCAGGAGAGA--AGCAGAGGCCCCGGGCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1445750 38 - 108792865 GAAGGATGGACACTGAGAGAGA--CTCAGAGGCCCC-ACCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1275229 35 - 7082604 GAAGGACTGACGCTGAGAGAGA--CGCAGAGCCCCC-C--- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1369411 37 + 1864846 GAAGGACGGACACTGAGAGAGA--TGCAGAGGCCCC-CCC- i cebCap1.NW_016107827v1 C 0 C 0 s dasNov3.JH576208 1804415 36 + 4416731 GAAACAGGAGCGT--GGTTGGA--AGCAGAGGTCAA-GGCT i dasNov3.JH576208 I 6 I 514 e aotNan1.NW_018513311v1 187177 88 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=11344.000000 s hg38.chr2_KI270774v1_alt 195634 4 + 223625 -GAGT s gorGor5.CYUI01015607v1 1455147 4 + 1464242 -GAGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1181653 4 + 81552678 -GGGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 6667 4 - 11509 -GGGT i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1475942 4 - 111193037 -GGGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1504130 4 + 3644372 -GGGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1455307 4 - 10304083 -GGGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1538287 4 - 107702431 -GGGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1030701 4 - 2200435 -GGGT i manLeu1.NW_012103754v1 C 0 I 1 s colAng1.NW_012118821v1 1456999 4 - 13651311 -GGGT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1445788 4 - 108792865 GGGG- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1275264 3 - 7082604 -GGG- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1369448 3 + 1864846 -GGG- i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 187177 88 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1804451 514 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=355232.000000 s hg38.chr2_KI270774v1_alt 195638 61 + 223625 GGACATGCGCTCAGGTGCTGAGGGCTGAGAGTGACCCAGGAGCAACAGCTGAGCCATATTT s gorGor5.CYUI01015607v1 1455151 61 + 1464242 GGACATGTGCTCAGGTGCTGAGGGCTGAGAGTGACCCAGGAGCAACAGCTGAGCCATGTTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1181657 12 + 81552678 G-------------------------------------------------GAGCTATGTTG i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 6671 61 - 11509 GGACATGCACTCAGGTGCTGAGGGCTCAGAGTGAACCAGGAGCAACAGCTGAGCCATGTTT i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1475946 61 - 111193037 GGACATGCACTCAGGTGCTGAGGGCTCAGAGTGAACCAGGAGCAACAGCTGAGCCATGTTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1504134 61 + 3644372 GGACATGCACTCAGGTGCTGAGGGCTCAGAGTGAACCAGGAGCAACAGCTGAGCCATGTTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1455311 61 - 10304083 GGACATGCACTCAGGTGCTGAGGGCTCAGAGTGAACCAGGAGCAACAGCTGAGCCATGTTT i cerAty1.NW_012000820v1 C 0 I 3760 s chlSab2.chr14 1538291 61 - 107702431 GGACATGCACTCAGGTGCTGAGGGCTCAGAGTGAACCAGGAGCAACAGCTGAGTCATGTTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1030706 61 - 2200435 GGACACGCACTCAGGTGCTGAGGGCTCAGAGTGAACCAGGAGCAACAGCTGAGCCATGTTT i manLeu1.NW_012103754v1 I 1 C 0 s colAng1.NW_012118821v1 1457003 61 - 13651311 GGACATGCACTCAGGTGCTGAGGGCTCAGAGTGAACCAGGAGCAACAGCTGAGCCATGTTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1445792 61 - 108792865 GGACATTCAGTCGGGTGCTGAAGGCCGGGAGTGACGCAGGAGCTGTGGCTGAGCCAGGTTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1275267 61 - 7082604 GGACATGCGGTCAGGTGCTGAGGGCCGGGAGTGACCCAGGAGCTGCGGCTGAGCCAGGTTT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1369451 61 + 1864846 GGACAGGCGGTCGGGTGCTGAGGGCCAGGAGTGACCCAGGAGCTGCGGCTGAGCCAGGTTT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 187265 61 + 287728 GGACATGCGGTCAGATGCTGAGGGCCAGGAGTGACCCGGGAGCTGCGGCTGAGCCAGGTTT i aotNan1.NW_018513311v1 I 88 C 0 e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1804451 514 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=564348.000000 s hg38.chr2_KI270774v1_alt 195699 83 + 223625 ACAGCCCCTCCTACGAGCCCTGGCTGGA--GGCCAGAGGTTCCAGGGAAGGTGGGCACCAGGGCCCATGTCTGAGAGATTCATAA s gorGor5.CYUI01015607v1 1455212 83 + 1464242 ACAGCCCCTCCTACAAGCCCTGGCTGGA--GGCCAGAGGTTCCAGGGAAGGTGGGCACCAGGGCCCATGTCTGAGAGATAAATAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1181669 83 + 81552678 GCAGCCCCTCCTATGAGCCCTGGCTGGA--GGCCAGAGGTTCCAGGGAAGGTGGGCACCAGGGCCCATGTCCGAGAGATTAATAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 6732 83 - 11509 ACAGCCCCTCATACGAGCCCTGGCTGGA--GGCCGGAGGTTCCAGAGAAGGTGGGCACCAGAGCCCGTGTTTGAGAGATTAATAC i rheMac8.chrUn_NW_015079380v1 C 0 C 0 s macFas5.chr13 1476007 83 - 111193037 ACAGCCCCTCATACGAGCCCTGGCTGGA--GGCCGGAGGTTCCAGAGAAGGTGGGCACCAGAGCCCGTGTCTGAGAGATTAATAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1504195 83 + 3644372 ACAGCCCCTCATACGAGCCCTGGCTGGA--GGCTGGAGGTTCCAGGGAAGGTGGGCACCAGAGCCCGTGTCTGAGAGATTAATAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1459132 85 - 10304083 ACAGCCCCTCATACGAGCCCTGGCTGGAGCGCCCGGAGGTTCCAGGGAAGGTGGGCACCAGAGCCCGTGTCTGAGAGATTAATAA i cerAty1.NW_012000820v1 I 3760 T 3762 s chlSab2.chr14 1538352 83 - 107702431 ACAGCCCCTCATACGAGCCCTGGCTGGA--GGCCGGAGGTTCCAGGGAAAGTGGGCACCAGAGCCCATGTCTGAGAGATTAATAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1030767 83 - 2200435 ACAGCCCCTCATACGAGCCCTGGCTGGA--GGCCGGAGGTTCCAGGGAAGGTGGGCACCAGAGCCCGTGTCTGAGAAATTAATAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1457064 83 - 13651311 ACAGCCCCTCATACAAGCCCTGGCTGGA--GGCCGGAGGTTCCAGGGAAGGTGGGCACCAGAGCCCATGTCTGAGAGATGAATAC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1445853 83 - 108792865 ACAGTCCCTCATATGAGCCCTGGATGGA--GGCCTGAGGTTCCAGGGAGGGTGTGCACCAGGGCCCAGGTCAGAGAGACGAAGAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1275328 82 - 7082604 CCAGCCCCTCATATGGGCCCTGGACGGA--GGCCCGAGGTCCCTGGGCGGGTGTGCACCAGGA-CCGGGTCTGAGAGACGAAGAT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1369512 83 + 1864846 ACAGCCCCTCATAAGAGCCCCGGATGTA--GGCCCGAGGTTCCAGGGAGGATGTGCACCAGGGCCCGGGTCTGAGAGACGAAGAC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 187326 83 + 287728 ACAGCCCCTCATATGAGCCCTGGATGGA--GGCCCGAGGGTCCAGGGAGGGTGTGCACCAGGGCCCGGGTTGGAGAGACGAAGAC i aotNan1.NW_018513311v1 C 0 C 0 e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1804451 514 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=121405.000000 s hg38.chr2_KI270774v1_alt 195782 20 + 223625 ACAGGTGCCACGGCTTCTCC s gorGor5.CYUI01015607v1 1455295 19 + 1464242 ACAG-TGCCACGGCTGCTGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1181752 19 + 81552678 ACAG-TGCCACGGCTGCTGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015079380v1 6815 20 - 11509 ACAGGTGCCATGGCTGCTGC i rheMac8.chrUn_NW_015079380v1 C 0 N 0 s macFas5.chr13 1476090 20 - 111193037 ACAGGTGCCATGGCTGCTGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1504278 20 + 3644372 ACAGGTGCCATGGCTGCTGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1455455 20 - 10304083 ACAGGTGCCATGGCTGCTGC i cerAty1.NW_012000820v1 T 3762 C 0 s chlSab2.chr14 1538435 20 - 107702431 ACAGGTGCCATGGCTGCTGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1030850 20 - 2200435 ACAGGTGCCATGGCTGCTGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1457147 20 - 13651311 ACAGGTGCCATGGCTGCTGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1445936 20 - 108792865 GCAGCTGCCACGGCGTCTCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1275410 20 - 7082604 GCAGGTGCCACAGCTTCTCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1369595 20 + 1864846 GTGGGTGCCACGGCTTCTCC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 187409 20 + 287728 GCAGGTGCCACAGCTTCTCC i aotNan1.NW_018513311v1 C 0 C 0 e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1804451 514 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=182446.000000 s hg38.chr2_KI270774v1_alt 195802 26 + 223625 TTCCGTCCTCACAGTGACTCACAGAC s gorGor5.CYUI01015607v1 1455314 24 + 1464242 TTCTGTCCTCATGGTGACTCA--GAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1181771 26 + 81552678 TTCTGTCCTCACAGTGACTTACAGAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 0 26 + 10392 TTCTGTCTTCACGGTGACTTACAGAC i rheMac8.chrUn_NW_015009285v1 N 0 C 0 s macFas5.chr13 1476110 26 - 111193037 TTCTGTCTTCACGGTGACTTACAGAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1504298 26 + 3644372 TTCTGTCTTCATGGTGACTTACGGAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1455475 26 - 10304083 TTCTGTCTTCACGGTGACTTACAGAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1538455 26 - 107702431 TTCTGTCTTCACGGTGACTTACAGAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1030870 26 - 2200435 TTCTGTCTTCACGGTGACTTACAGAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1457167 26 - 13651311 TTCTGTCTTCACGGTGACTTACAGAC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1445956 26 - 108792865 TTCCATCCTCACGGTGACTCACAGAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1275430 26 - 7082604 TTCTGTCCTCACGGCGACTTGCAGAC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1369615 26 + 1864846 TTCCGTCCTCACGGTGACTCGCAGAC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 187429 26 + 287728 TTACATCCTCACGGTGACTCACAGAC i aotNan1.NW_018513311v1 C 0 I 5 e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1804451 514 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=57409.000000 s hg38.chr2_KI270774v1_alt 195828 16 + 223625 AAGGATGCCAAGGCCT s gorGor5.CYUI01015607v1 1455338 16 + 1464242 AAGGACGCCAAGGCCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1181797 16 + 81552678 AAGGACGCCAAGGCCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 26 16 + 10392 ACGGACGCCGAGGCCT i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chr13 1476136 16 - 111193037 ACGGACGCCGAGGCCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1504324 16 + 3644372 ACGGACGCCGAGGCCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1455501 16 - 10304083 ACGGACGCCGAGGCCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1538481 16 - 107702431 AAGGACGCCGAGGCCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1030896 16 - 2200435 ACGGACGCCGAGGCCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1457193 16 - 13651311 AAGGACGCCGAGGCCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1445982 8 - 108792865 AAGGAGGC-------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1275456 8 - 7082604 AAGGAAGC-------- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1369641 8 + 1864846 AAGGAAGC-------- i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 187455 5 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1804451 514 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=233589.000000 s hg38.chr2_KI270774v1_alt 195844 36 + 223625 GG-AAGATGAGGCATGGCTGTGAGAGGAGCTCACACT s gorGor5.CYUI01015607v1 1455354 37 + 1464242 GGGAAGATGAGGCGTGGCTGTGAAAGGAGCTCACACT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1181813 37 + 81552678 GGGAAGATGAGGCATGGCTGTGAGAGGAGCTCACACT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 42 37 + 10392 GGGAAGATGAAGTGTAGCTGTGAGAGGAGCTCACGTT i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chr13 1476152 37 - 111193037 GGGAAGATGAAGCGTAGCTGTGAGAGGAGCTCACATT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1504340 37 + 3644372 GGGAAGATGAAGCGTAGCTGTGAGAGGAGCTCACATT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1455517 37 - 10304083 GGGAAGATGAAGCGTAGCTGTGAGAGGAGCTCACATT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1538497 37 - 107702431 GGGAAGATGAGGCATGGCTATGAGAGGAGCTCACACC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1030912 37 - 2200435 GGGAGGATGAAGCGTAGCTGTGAGAGGAGCTCACATT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1457209 37 - 13651311 GGGAAGATGAGGCGTGGCTGTGACAGGAGCTCACACT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1445990 30 - 108792865 -------TGAGGCATGGCTGTGAGAGGAGTCCACACT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1275464 30 - 7082604 -------GGAGGCGTGGCTGTGAGAGGAGCCCACACT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1369649 30 + 1864846 -------AGAGGCGTGGCCGTGAGAGGAGCCCACACT i cebCap1.NW_016107827v1 C 0 I 41 s aotNan1.NW_018513311v1 187460 36 + 287728 -GGAAGCTGAGGCGTGGCTGTGAGAGGAGCCCACACT i aotNan1.NW_018513311v1 I 5 C 0 e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1804451 514 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=15600.000000 s hg38.chr2_KI270774v1_alt 195880 2 + 223625 CC s gorGor5.CYUI01015607v1 1455391 2 + 1464242 CC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1181850 2 + 81552678 CC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 79 2 + 10392 CC i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chr13 1476189 2 - 111193037 CC i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1504377 2 + 3644372 CC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1455554 2 - 10304083 CC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1538534 2 - 107702431 CC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1030949 2 - 2200435 CC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1457246 2 - 13651311 CC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1446020 2 - 108792865 CC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1275494 2 - 7082604 CC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 187496 2 + 287728 CC i aotNan1.NW_018513311v1 C 0 I 415 e cebCap1.NW_016107827v1 1369679 41 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1804451 514 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=229788.000000 s hg38.chr2_KI270774v1_alt 195882 56 + 223625 CCTGGCCTGCGAGAGCTCTGGCCCCGGCCAGCCCGTGTGCTGATCGT---ATTAGACGG s gorGor5.CYUI01015607v1 1455393 59 + 1464242 CCCGGCCCATGAGAGCTCTGGCCCCGGCCAACCCGTGTGCTGGTCGTCATATTAGATGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1181852 58 + 81552678 CC-GGCCCCTGAGAACTCCGGCCCCGGCCAACCCGTGTGCTGGTCGTCATTGTAGATGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 81 59 + 10392 GCTGGCCCACGAGAGCTCCAGCCCCGGCCAGCCCGTGTGCTGGTTGTCATATTAGATGG i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chr13 1476191 59 - 111193037 GCTGGCCCACGAGAGCTCCAGCCCCGGCCAGCCCGTGTGCTGGTTGTCATATTAGATGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1504379 59 + 3644372 GCTGGCCCACGAGAGCTCCAGCCCCGGCCAGCCCGTGTGCTGGTTGTCATATTAGATGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1455556 59 - 10304083 GCTGGCCCACGAGAGCTCCAGCCCCGGCCAGCCCGTGTGCTGGTTGTCATATTAGACGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1538536 58 - 107702431 -CCAGCCCACGAGAGCTCCAGCCCCGGCCAGCCCGTGTGCTGGTTGTCATATTAGGTGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1030951 59 - 2200435 GCTGGCCCACGAGAGCTCCAGCCCCGGCCAGCCCGTGTGCTGGTTGTCATATTAGATGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1457248 59 - 13651311 CCCGGCCCACGAGAGCTCCAGCCCCGGCCAGCCCGTGTGCTGGTTGACATATTAGATGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1446022 40 - 108792865 CATGGCCCGTGGGAGCTCCAGCCCCGGCCAGGCTGAGTGT------------------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1275496 40 - 7082604 CGTGGCCCGTGAGAACTCCAGACCCAGCCACGCTGAATCT------------------- i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 187498 415 + 287728 I e cebCap1.NW_016107827v1 1369679 41 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1804451 514 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=516043.000000 s hg38.chr2_KI270774v1_alt 195938 95 + 223625 AGTCTCCAGAGAAACAGGAGCAATCAGagatgcagatgtatgtatagaaatagttatagatta----gagacatccatagagacacagtttgtagatgt s gorGor5.CYUI01015607v1 1455452 99 + 1464242 GGTCTCCAGAGAAACAGGAGCAATCAGAGATGCAGATGTGTGTGCagaaacagttatagattacacagagacatccacagagacacagtttgtagatgt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1181910 99 + 81552678 AGTCTCCAGAGAAACAGGAGCAATCAGAGATGCAGATGTGTGTACAGAAAtagttatagattagacagagacatccatagagacacagtttgtagatgt i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 140 95 + 10392 ACTCTCCAGAGGAACAGGAGCAATCAGAGATGCAGATGTGTGTACAGAAATCGTTCTAGATTAG----ACACATCCACAGAGACACAGTTTGCAGATGT i rheMac8.chrUn_NW_015009285v1 C 0 I 2461 s macFas5.chr13 1476250 93 - 111193037 ACTCCCCAGAGGAACAGGAGCAATCAGAGATGCAGATGTGTGTATAGAAATCGTTCTAGATTAG----AGACATC--CAGAGACACAGTTTGTAGATGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012011978v1 1504438 97 + 3644372 ACTCTCCAGAGGAACAGGAGCAATCAGAGATGCAGATGTGTGTACAGAAATCGTTCTAGATTAGACACAGACATC--CAGAGACACAGTTTGTAGATGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1455615 99 - 10304083 ACTCTCCAGAGGAACAGGAGCAATCAGAGATGCAGATGTGTGCACagaaatagttctagattagacagagacatccatagagacacagtttgtagatgt i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1538594 96 - 107702431 ACTCTCCAGAGGAACAGGAGCAATCAGAGACGCAGATGTGTGtacagaaatagttctagattagacagagacatccacagagacacagtttgtaga--- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1031010 99 - 2200435 ACTCTGCAGAGGAACAGGGGCAATCAGAGATGCAGATGTGTGCACagaaatagttctagattagacagagacatccatagagacacagtttgtagatgt i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1457307 99 - 13651311 ACTCTCCAGAGGAACAGGAGCAATCAGAGATGCAGATGTGTGTGCagaaatagttctagattagacagagacatccatagagacacagtttgtagatgt i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1446062 97 - 108792865 GGCCTCCAGAGAAACGGCAGCAATCAGAGATGCAGATGTGGGGATAGAAATAGTTATAGATTAGACAGACAAAGCTGTAGAG--ACAGTTCGGAGAGGT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1275536 93 - 7082604 GGCCTCCAGAGAAACGGAAGCCATCGGAGATACAGATGTGGGGATAGAAATAGTTGTAGATTAGACAG----CGCCGTAGAG--ACAGTTTGCAGAGGT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1369720 97 + 1864846 AGCCTCCAGAGAAACGGAAGCAATCAGAGATGCAGATGTGGGGATAGAAATGGTTGTAGATTAGACAGAGACCGCCGTAGAG--ACAGTTTGCAGAGGT i cebCap1.NW_016107827v1 I 41 C 0 e aotNan1.NW_018513311v1 187498 415 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1804451 514 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=519388.000000 s hg38.chr2_KI270774v1_alt 196033 190 + 223625 agttacgtagatttagatatagatatcgatttaaatatg----gat----ata--------tgt-agatatactat----atatagatttacatagattgaacatagatatagataacaaatatgtagacatagatatagtta------tactgatttagatatagatactgattgtgggtat--atatagttttag------gtacagatgcagatataaaa----at-- s gorGor5.CYUI01015607v1 1455551 200 + 1464242 agttatgtagatttagatatagatatcgatttaaatata----gat----atggatattggttt-agatatac-at-----tatagagttacatagattagacatagatattgataacaaatatgtagacatagatatactga------tttagatgtggatatagatattgatcatggatat--gtgtagttttagacttaggtacagatgcagatataaaa-------- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1182009 184 + 81552678 agttatatagatt------tagacattgatttaaatata----gat----atgaata----ttt-agatatac-at----atatagatttacatagattagacatagatatagataa---------atatatagacatactga------tttagatttggatatagatattgattatggatac--atatagttttagatttaggtacagatgcagatataaaa----at-- i nomLeu3.chr19 C 0 C 0 s macFas5.chr13 1476343 188 - 111193037 G--TGTACAGAAATCGTTCTAGA-------TTAGAGAC------ATCCACAGAGACACAGTTTGCAGATGTGT-GTACAGAGATCGTTCTAGATTAGACAGAGACATCCACAGAGACACAGTTTGCAGATGTGTGTACAG--AAATCGTTCTAGA-TTAGACACAGACATC-------CACAGAGACACAGTT-----------TGCAGATGTGTGTACAGAAAT------ i macFas5.chr13 C 0 N 0 s macNem1.NW_012011978v1 1504535 211 + 3644372 AGTTGtatagatttagatatagatatcgatttaaatat------at----atggatattgattg-agatatac-atacatgcatagattcacataaattagacatacatatagataacaaaaatgtagacatggatatagttataccaatttagatttggatatagatattgattatggatatagatatagttttagacttaggtacagatgcagatataaaa-------- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1455714 211 - 10304083 agttgtatagatttagatatagatatcgacttaaatat------at----atggatattggttg-agatatac-atacatgcatagattcacatagattagacatacatatagataacaaaaatgtagacatggatatagttataccaatttagatttggatatagatattgattatggatatagatatagttttagacttaggtacagatgcagatataaaa-------- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1538690 204 - 107702431 ---tgtatagatttagatatagatatcgatttaaatat------at----atggatattgattg-agatatac-atacatacatagattcacatagattag----acatatagataacaaaaatgtagacatggatatagttataccaatttagatttggatatagatattggttatggatatagatatagttttagacttaggtacagatgcagatataaaa-------- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1031109 192 - 2200435 agttgtataggtttagatatagatatcgatttaaatat------at----atggatattgattg-agatatac-atacttgcatggattcacatagattagacatacatatagataacaaaaatgtagacatggatatagttataccaatttagatt-------------------tggatatagatatagttttagacttaggtacagatgcagatataaaa-------- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1457406 209 - 13651311 agttgtgtagatttagatatagatattggtttaaatat------at----atggatattgattg-agatacac-at----gcatagatttacatagattagacatacatatagataacaaaaatgtagacatggatatagttataccaatttagatttggatatagatattgattatggatatagatacagttttagacttaggtacagatgcagatataaaa--at---- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1446159 190 - 108792865 GGTTATGTTGATTTAGCTATGGAGGTTGATTTAAGCatatatggat----atagatattgattt-agatattg-acacacatatagatttacgtagattagac-------------ataaatatgtagacag----attgttttatcgatttagact----------gattaattatggatatagatatagttttagaca--ggtacagatatggatataaaa------at i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1275629 194 - 7082604 AGTTACATTGATTTAGCTATGGAGGTTGATTTAAATATATATGGGT----ATAGATATTGATTT-AGATATAG-ATACACTTATAGATTTACATAGATTAGACGTA----------GTAAATATGTAGAACG----ATAGTTTTATCGATTTAGACT----------TATCGATTATGGATATAGATATAGTTTTAGACAC-AGGTCAGATGTGGATATAAAA------AT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1369817 198 + 1864846 AGTTatattgatttagctgtggaggttgatttaaatatatatggat----atagatattgattt-aggtatag-atacacatatagatttacatagattagacata---------gataaatatgtagacag--atatagttttatcgatttagact----------tattgattatggatatggatatagttttagacatacgtacaggtgtggatataaaa------at i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 187498 415 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1804451 514 + 4416731 I e rheMac8.chrUn_NW_015009285v1 235 2461 + 10392 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=168244.000000 s hg38.chr2_KI270774v1_alt 196223 57 + 223625 atagatataaatttacacataggtatagaatagatttaggtgtagctatacctatgt s gorGor5.CYUI01015607v1 1455751 54 + 1464242 ---tacataaatttacacataggtatagaatagattcaggtgtggctatccctgtgt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1182193 57 + 81552678 atagatttaaatttacacataggtatagaatagattcaggtgtagctatccctatgt i nomLeu3.chr19 C 0 C 0 s macNem1.NW_012011978v1 1504746 53 + 3644372 ----atataaatttacacataggtatagaatagattcaggtgtagctatccctatat i macNem1.NW_012011978v1 C 0 I 311 s cerAty1.NW_012000820v1 1455925 53 - 10304083 ----atataaatttacacataggtatagaatagattcaggtgtagctatCCCTATAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1538894 53 - 107702431 ----atataaatttacacataggtatagaatagattcaggtgtagctatccctgtaa i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1031301 53 - 2200435 ----atataaatttacacataggtatagaatagattcaggtgtagctatccctatat i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1457615 51 - 13651311 ------ataaatttatacatatgtatagaatagattcaggtgtagctatccatatat i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1446349 20 - 108792865 -----------------------------atagatataaatgta--------tatGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1275823 51 - 7082604 ------ATAAAGGTACATACAGGTATAGAATAGATTTAGGTGTAGCTACCCCTGTGT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1370015 57 + 1864846 atagatataaaggtacatgcaggtatagaatagctttaggtgtagctatccctgtat i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 187498 415 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1804451 514 + 4416731 I e rheMac8.chrUn_NW_015009285v1 235 2461 + 10392 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=73925.000000 s hg38.chr2_KI270774v1_alt 196280 14 + 223625 aagtttagatatag s gorGor5.CYUI01015607v1 1455805 13 + 1464242 aagttt-gatatag i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1182250 14 + 81552678 aagtttagatatag i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 2696 14 + 10392 AAgtttggatatag i rheMac8.chrUn_NW_015009285v1 I 2461 C 0 s macFas5.chrUn_KE146933 2837 14 - 11164 aaGTTTGGATATAG i macFas5.chrUn_KE146933 N 0 C 0 s macNem1.NW_012011978v1 1505110 14 + 3644372 aagtttggatatag i macNem1.NW_012011978v1 I 311 C 0 s cerAty1.NW_012000820v1 1455978 14 - 10304083 AAGTTTGGATATAG i cerAty1.NW_012000820v1 C 0 I 4336 s chlSab2.chr14 1538947 14 - 107702431 aagtttggatatag i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1031354 14 - 2200435 aagtttggatatag i manLeu1.NW_012103754v1 C 0 I 593 s colAng1.NW_012118821v1 1457666 14 - 13651311 aagtttggatatag i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1446369 13 - 108792865 AAGTTT-CATGTAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1275874 13 - 7082604 AAGTTT-GATATAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1370072 13 + 1864846 aagtta-gatatag i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 187498 415 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1804451 514 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=117606.000000 s hg38.chr2_KI270774v1_alt 196294 31 + 223625 acacaatatagattttggtatagatgtaaat s gorGor5.CYUI01015607v1 1455818 31 + 1464242 acataatatagatttgggtataggtgtaaat i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1182264 31 + 81552678 acacaatatagattttggtatagatgtaaat i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 2710 30 + 10392 acacagtatagattt-ggtatagatgtaaat i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 2851 30 - 11164 ACACAGTATAGATTT-GGTATAGATGTAAAT i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1505124 30 + 3644372 acacaatatagattt-ggtatagatgtaaat i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1538961 30 - 107702431 acacaatatagattt-ggtatagatgtaaat i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1457680 30 - 13651311 acaaaatatagattt-ggtatagatgtaaat i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1446382 30 - 108792865 ACACAATGTAGATTT-GCTGTGGATGTGAAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1275887 30 - 7082604 ACACACTACAGATTT-GGTGTAGGTGTGAAC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1370085 30 + 1864846 acacactatagattt-ggtgtagatGTGAAC i cebCap1.NW_016107827v1 C 0 I 46 e aotNan1.NW_018513311v1 187498 415 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1804451 514 + 4416731 I e manLeu1.NW_012103754v1 1031368 593 - 2200435 I e cerAty1.NW_012000820v1 1455992 4336 - 10304083 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=137145.000000 s hg38.chr2_KI270774v1_alt 196325 49 + 223625 --atagaggtagttaccc--atacatagacatagttttacatGTGCTTCTAGC s gorGor5.CYUI01015607v1 1455849 49 + 1464242 --atagaggtagataCCC--ATACATAGACATAGTTTCACATGTGCTTCTAGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1182295 51 + 81552678 --atagaggtagatacccatatacatagacataGTTTTACATGTGCATCTAGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 2740 49 + 10392 --acagCGGTAGACACCC--ATACACAGACGCAGTTTTAGATGTGCATCTAGC i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 2881 49 - 11164 --ACAGCGGTAGACACCC--ATACACAGACGCAGTTTTAGATGTGCATCTAGC i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1505154 49 + 3644372 --acagCGGTAGACACCC--ATACACAGACGTAGTTTTagatgtgcatctagc i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1538991 49 - 107702431 --acagCAGTAGACACCC--ATACACAGACATAGTTTTAGATGTGCATCTAGC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1457710 49 - 13651311 --acagcggtagacaccc--atatgtagacatagttttagatGTGCATCTAGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1446412 49 - 108792865 ATGGAGAGGCGAAGCCCC--ATATACAGATG--GTTTTAGGTGCACATCCAGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1275917 49 - 7082604 ATGGAGAGGCGGATCCCC--ATACATAGACT--GTTTTAGATGCGCATCTAGC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 187498 415 + 287728 I e cebCap1.NW_016107827v1 1370115 46 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1804451 514 + 4416731 I e manLeu1.NW_012103754v1 1031368 593 - 2200435 I e cerAty1.NW_012000820v1 1455992 4336 - 10304083 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=24270.000000 s hg38.chr2_KI270774v1_alt 196374 10 + 223625 TCtatgtacc s gorGor5.CYUI01015607v1 1455898 10 + 1464242 TCtatgtacc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1182346 10 + 81552678 TCtgtgtact i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 2789 10 + 10392 TCtatgtata i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 2930 10 - 11164 TCtatgtata i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1505203 10 + 3644372 tctatgtata i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1539040 10 - 107702431 TCtatgtata i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1457759 10 - 13651311 TCtatgtatg i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1446461 8 - 108792865 TCTGCAC--G i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1275966 10 - 7082604 TCTGTGCCtg i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1370161 10 + 1864846 TCTGTGCatg i cebCap1.NW_016107827v1 I 46 C 0 e aotNan1.NW_018513311v1 187498 415 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1804451 514 + 4416731 I e manLeu1.NW_012103754v1 1031368 593 - 2200435 I e cerAty1.NW_012000820v1 1455992 4336 - 10304083 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=514062.000000 s hg38.chr2_KI270774v1_alt 196384 105 + 223625 gatatgtgaaagcatctctattctgcagaattggtcatgaaattagagaggctgaggagtcccaggatctgctgtctgcaaactggagccccaggggagctggcg s gorGor5.CYUI01015607v1 1455908 101 + 1464242 gatatgtgaaagcatctctattctgcagaattggtcatggaattag----gctgaggagtcccaggatctgctgtctgcaaactggagccccaggggagttggtg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1182356 101 + 81552678 gatacgtgaaagcatctctattctgcagaattggtcatggaattag----gctgaggagtcccaggatctgctgtctgcaaactggagccccaggggagctggcg i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 2799 105 + 10392 gatatgtgaaagcatctctatcctgcagaactggtcatggaattagagaggctgaggagtcccaggatctgctgtctgcaaactggagccccagcgttgctggcg i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 2940 105 - 11164 gatatgtgaaagcatctctatcctgcagaactggtcatggaattagagaggctgaggagtcccaggatctgctgtctgcaaactggagccccagcgttgctggcg i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1505213 105 + 3644372 gatatgtgaaagcgtctctatcctgcagaactggtcatggaattagagaggctgaggagtcccaggatctgctgtctgcaaactggagccccagcgttgctggcg i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1539050 105 - 107702431 gatacgtaaaagcatctctattctgcagaactggtcatggaattagagaggctggggagtcccagggtctgctgtctgcaaactggagccccagcgttgctggcg i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1457769 105 - 13651311 gatacatgaaagcatctctattctgcagaattggtcatggaattagagaggctgaggagtcccaggatctgctgtctgcaaaccggagccccagcgttgctggtg i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1446469 99 - 108792865 gatatgtgaaagcatctctattctgcggaacttgtcatggaattag----gctgaggagtcccagggtctgctgtctgcacactggagccccaggagagcta--a i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1275976 101 - 7082604 gatatgtgaaagcgtctctatgctgtggaattggtcatggaattag----gctgcggagtcccgggatctgccgtctgcacaccggagccccgggggagctggcg i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1370171 101 + 1864846 gatgtgtaaaagcatctctattctgtggaattggtcatggaattag----gctgaggagtcccagggcctgccgtctgcacaccagagtccccggagagctggcg i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 187913 99 + 287728 gatatgtgaaagca--tctgttctgcggaattggtcatggaattag----gctgaggagtccctggacctgctgtctgcacactggagccccaggagagctggcg i aotNan1.NW_018513311v1 I 415 C 0 e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1804451 514 + 4416731 I e manLeu1.NW_012103754v1 1031368 593 - 2200435 I e cerAty1.NW_012000820v1 1455992 4336 - 10304083 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=1932987.000000 s hg38.chr2_KI270774v1_alt 196489 286 + 223625 gggcagttccagtctgagggcaggtgaagctgcaatgagatgtcccagctcaagcagag--agtcaggaaaagagaagtgaagccctttttcctccacttcctgctctactggggccctggaaggatgggacagggcccacccatgttggggagagccgtctgcttttctcagaccacagattccaatgctgatcccttccaggacccaactcaaaaacacagtgggaataatgtctaatctgggcgcctgtgctccagtcaagcggacacataaaattaaccatccc s gorGor5.CYUI01015607v1 1456009 273 + 1464242 gggtagttccagtctgagggcaggcgaagctgcaatgagatgccccagctcaagcagag--agtcaggaaaagagaagtgaagccctttttcctccact-------------ggggcctggaaggatgggacagggcccacccatgttggggagagccgtctgcttttctcagaccacagattccaatgctgatcccttccaggacccatctcaaaaacacagagggaataatgtctaacctggacgcctgtgctccagtcaagctgatacataaaattaaccatccc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1182457 267 + 81552678 gggtagttccagtctgagggcaggcgaagccgcaatgagatgtcccagctcaagcagag--agtcaggaaaagagaagtgaagcccttttttctccact-------------ggggcctggaaggatgggacagggtccacccgtgttggggagagccgtccgcttttctcagaccacagattccaatgctgatcctgtccaggacccatctcaaaaacacagcgggaataatgtctaatctgggcacctgtgctccagtcaagctgacaca------taaCCATCCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 2904 286 + 10392 gagtagttccagtctgagggcagacgaagctgccatgagatgtcccagctcaagcagca--agtcaggaaaagagaagtgaagtccttttccctccacttcctgctctactgggtccctgaaaggatgggacagggcccacccatgttggggagagccgtctgcttttctcagaccacagattccagtaccgatcccttccagaacctatctcaaaaacacagcaggaataatgtctaatctgggcccctgtgctccagtcaagtggacacataaaattaaccatccc i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 3045 286 - 11164 gagtagttccagtctgagggcagacgaagctgccatgagatgtcccagctcaagcagca--agtcaggaaaagagaagtgaagtccttttccctccacttcctgctctactgggtccctgaaaggatgggacagggcccacccatgttggggagagccgtctgcttttctcagaccgcagattccagtaccgatcccttccagaacctatctcaaaaacacagcaggaataatgtctaatctgggcccctgtgctccagtcaagtggacacataaaattaaccatccc i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1505318 286 + 3644372 gagtagttccagtctgagggcagacgaagctgccatgagatgtcccagctcaagcagca--agtcaggaaaagagaagtgaagtccttttccctccacttcctgctctactgggtccctgaaaggatgggacagggcccacccgtgttggggagagccgtctgcttttctcagaccacagattccagtaccgatcccttccagaacctgtctcaaaaacacagcaggaataatgtctaatctgggcccctgtgctccagtcaagtggacacataaaattaaccatccc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1460328 286 - 10304083 gggtagttccagtctgagggcagacgaagctgccatgagatgtcccagctcaagcagca--agtcaggaaaagagaagtgaagtccttttccctccacttcctgctctactgggtccctgaaaggatgggacagggcccacccatgttggggagagccgtctgcttttctcagaccacagattccagtgccgatcccttccagaacctatctcaaaaacacagcaggaataatgtctaatctgggcccctgtgctccagtcaagtggacacataaaattaaccatccc i cerAty1.NW_012000820v1 I 4336 C 0 s chlSab2.chr14 1539155 286 - 107702431 gggtggttccagtctgagggcaggcgaagctgccatgagatgtcccagctcaagcagag--agccaggaaaagagaagtgaagtccttttccctccacttcctgctctactgggtccctgaaaggatgggacagggcccacccatgttggggagagtggtctgcttttctcagaccacagattccagtgccgatcccttccagaacctatctcaaaaacacagcaggaataatgtctaatctgggcccctgtgctccagtcacgcggacacataaaattaaccatccc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1031961 286 - 2200435 gggtagttccagtctgagggcagacgaagctgccatgagatgtcccagctcaagcagca--agtcaggaaaagagaagtgaagtccttttccctccacttcctgctctactgggtccctgaaaggatgggacagggcccacccatgttggggagagccgtctgcttttctcagaccacagattccagtgccgatcccttccagaacctatctcaaaaacacagcaggaataatgtctaatctgggcctctgtgctccagtcaagtggacacataaaattaaccatcCC i manLeu1.NW_012103754v1 I 593 C 0 s colAng1.NW_012118821v1 1457874 278 - 13651311 gggtagttccagtctgagggcagacgaagctgccatgagatgtcccagctcaagcagag--agtcaggaaaaga-----gaagtcctttttcctccacttcctgctctact-ggtccctgaaaggatgggacagggcccacccatgttggggagagccgtctgcttttctcagaccacagattccagtgccgatcccttccagaacctatctcaaaaacacagcaggaataatgtctaatctgggcccctgtgctccagtcaagcggacac--aaaattaaccatccc i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1446568 283 - 108792865 gggtaggcccagcctgagggcaggcgaagctgtgatgagagggcccagctcaagcagagagaggcaggaaaagagaagtgaagtcatttctcctccacttcttgctctgctggggcccccaaagggtggggcagggccca-ccacgtcggggagagccctctgcttttctcagac--cagattccagcgccaatcccttccagaacctgactcagaa--acagcaggaataatgtctaatctgggcgcctatgctccggtcaagcagacacataaaattaaccCTTCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1276077 284 - 7082604 gggcagtcccagtcggagggcaggcgaagctgtgatgagagggcccagctcaagcagagacaggcagg-aaggaggagcgaagtccttt-tcctccgcttcttgctctgctggggccctcaaagggtggggcagggccca-ccacatctgggagagccctctgcttttctcagaccacagattccaacgccaaacccttccagaacctatcgcagaaacacagcaggagtaaggtctaatctgggcgcctgtgctccggt-aagcagacacataaaattaaccatGCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1370272 285 + 1864846 gggcagtcccggtctgagggcaggcgaaggggtgatgagagggcccagctcaagcagagagaggcaggaaaagaggagcaaagtcatttttcctccacttcttgctctgccggggccctcaaagagtggggcagggccca-ccacgtcgggaagagccgtctgc-tttctcagaccacagattccaacgccagtcccttccagaacctatctcagaaacacagcaggggtgatgtctaatctgggcgcctgtgctccggt-aagcggacacataaaattaaccatGCC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 188012 286 + 287728 gggcagtcccagcctcagggcaggcaaagctgtgacgagagggcccagctcaagcagagagaggcaggaaaagagaagcgaagtcatttttcctccgctgcttgctctgctggggccctcaaagggtggggcagggccca-ccacgtcggggaca-ccctctgcttttctcagactacagattccaacgccaatcccttccagaacctatctcggaaacacagcaggagtaatgtctaatcagggcacctgtgctctggtcaagcagacacataaaattaaccaCACC i aotNan1.NW_018513311v1 C 0 C 0 e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1804451 514 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=626749.000000 s hg38.chr2_KI270774v1_alt 196775 100 + 223625 aGTCATGTTATTC--TGACCTGAATTCTCCA-AAATCCCAGTGCCCTCTGTCTGCCCAGGGCCTGCCCAAACCCGATGCCGTTTCTTTCCAAAGGCCCTCGTT s gorGor5.CYUI01015607v1 1456282 100 + 1464242 aGTCATGTTATTC--TGACCTGAATTCTCCA-AAATCCCAATGCCCTCTGTCTGCCCAGGGCCTGCCCAAACCTGATGCCCTTTCTTTCCAAAGGCCCTCGTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1182724 100 + 81552678 AGTCATATTATTC--TGACCGGAATTCTCCA-AAATCCCGATGCCCTGTGTCTGCCCAGGGCCTGCCCAAACCCAATGCCCTTTCTTTCCAAAGGCCCTTGTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 3190 98 + 10392 aGTCA--TTATTC--TGACCTGAATGCTCCA-AAATCCCGATGCCCTCTGTCTGCCCAGGGCCTGCCAAAACCCGATACCCTTTCTTTCCAAAGGCCCTGGAA i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 3331 98 - 11164 aGTCA--TTATTC--TGACCTGAATGCTCCA-AAATCCCGATGCCCTCTGTCTGCCCAGGGCCTGCCAAAACCCGACACCCTTTCTTTCCAAAGGCCCTGGAA i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1505604 98 + 3644372 aGTCA--TTATTC--TGACCTGAATGCTCCA-AAATCCCGATGCCCTCTGTCTGCCCAGGGCCTGCCAAAACCCGATACCCTTTCTTTCCAAAGGCCCTGGAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1460614 98 - 10304083 aATCA--TTATTC--TGACCTGAATGCTCCA-AAATCCCGATGCCCTCTGTCTGCCCAGGGCCTGGCAAAACCCGATACCCTTTCTTTCCAGAGGCCCTGGAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1539441 98 - 107702431 aGTCG--TTATTC--TGACCTGAATGTTCCA-AAATCCCGATGCCCTCTGTCTGCCCGGGGCCTGCCAAAACCCGATACCCTTTCTTTCCAAAGGCCCTGGAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1032247 98 - 2200435 GGTCA--TTATTC--TGACCTGAATGCTCCA-AAATCCCGATGCCCTCTGTCTGCCCAGGGCCTGCCAAAACCCGATACCCTTTCTTTCCAAAGGCCCTGGAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1458152 98 - 13651311 aGTCA--TTATTC--TGAACTGAATGCTCCA-AAATCCCGATGCCCTCTGTCTGCCCAGGGCCTGCCCAAACCCGATACCCTTTCTTTCCAAAGGCCCTGGAA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1446851 98 - 108792865 AGTCAT--TATTC--TGACCTGAATTCCTCAAAAATCCCACTGCCCTCTGTCTGCCCAGGGCCTGCCCAAACCCGCTGGCCTTTCTTTCCAAA-GCCCTTGTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1276361 98 - 7082604 AGTCATACTATTC--TGACCTGCATTCCTC--AAATCCCACTGCCCTCTGTCTGCCCAGGGCCTGCCCAGACCCACTGCCCTTTGTTTCCAAA-GCCCTCGTT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1370557 80 + 1864846 AGTCATGTTATTC--TGACCT-----------GAATCCCACTGCCCTCTGCCTGCCCAGGGACTGCCCAAACCTGC---------TTTCCAAA-GCCGTTGTT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 188298 99 + 287728 AGTCATATTATTC--TGACCTGAATTCCTCA-AAATCCCGCTGCCCTCTGTCTGCCCAGGGCCTGTCCAATCCCGCTGCCCTTTCTTTCCAAA-GCTCTCGTT i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1804965 101 + 4416731 agccacATTATTCATTCAACT-AGTTCTTCA-CAATTCCCATACAATCAGTCCCCACAGGGCCTGCCTGCCCCTTATTTCTTTCCCTTTAAACAGCTTTTCTT i dasNov3.JH576208 I 514 I 1877 e otoGar3.GL873658 965825 540 + 5252280 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=403215.000000 s hg38.chr2_KI270774v1_alt 196875 65 + 223625 GGCCTTCACCCAGCCTCAGGGACTCCC-CCTTGCCCAGCCCCACCAGAGGGG-------CACCCACGCCCACA s gorGor5.CYUI01015607v1 1456382 65 + 1464242 GGCCTTCACCCAGCCTCAGGGACTCCCGCCTTGCCCAGCCCCACAAGAGGG--------CACCCACGCCCACA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1182824 66 + 81552678 GGCCTTCACCCAGCCTCAGGGACTCCCCCCTTGCCCAGCCCCACAAGAGGGG-------CACCCATGCCCACA i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 3288 73 + 10392 GGCCTTCACCCAGCCTCAGGGAATCCCCCCTCGCCCAGCCCCACAAGAGGGGGCACCCACACCCACGCCCACA i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 3429 73 - 11164 GGCCTTCACCCAGCCTCAGGGAATCCCCCCTCGCCCAGCCCCACAAGAGGGGGCACCCACACCCATGCCCACA i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1505702 73 + 3644372 GGCCTTCACCCAGCCTCAGGGAATCCCCCCTCGCCCAGCCCCACAAGAGGGGGCACCCACACCCACGCCCACA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1460712 73 - 10304083 GGCCTTCACCCAGCCTCAGGGAATCCCCCCTCGCCCAGCCCCACAAGAGGGGGCACCCACACCCACGCCCACA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1539539 73 - 107702431 GGCCTTCACCCAGCCTCAGGGAATCCCCCGTCGCCCAGCCCCACAAGAGGGGGCACCCATACCCATGCCCACA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1032345 73 - 2200435 GGCCTTCACCCAGCCTCAGGGAATCCCCCCTCGCCCAGCCCCACAAGAGGGGGCACCCACACCCACGCCCACA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1458250 72 - 13651311 GGCCTTCACCCAGCCTCAGGGAATCCCCCA-CTCCCAGCCCCACAAGAGGGGGCACCCATACCCACGCCCAGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1446949 61 - 108792865 AGCCATCACCCAGCCTCGGGGACTCCCA-----CCCCACC-------AGGGGGCACCCACAACCAGGCCAACA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1276459 66 - 7082604 AGCCATCACCCAGCCTCGGGGACTCCCATCCCGCCCCACC-------CGGGGGCACCCGTGACCACACCCACA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1370637 66 + 1864846 AGCCATCACCCAGCCTCGGGGACTCCCATCCCGCCCCACC-------ACGGGGCACCCACGACCGTGCCCACA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 188397 66 + 287728 AGCCGTCACCCAGCCTCGGGGACTCCCATCCCGCCCCACC-------AGGGGACACCCACGACCATGCCCACA i aotNan1.NW_018513311v1 C 0 C 0 e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1805066 1877 + 4416731 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=283739.000000 s hg38.chr2_KI270774v1_alt 196940 38 + 223625 GCAGAGAACTCC--------AGGGCTCCCCGGGGTGGCACTGAAGA-------- s gorGor5.CYUI01015607v1 1456447 38 + 1464242 GCAGAGAACTCC--------AGGGCTCCCCGGGGTGGCACTGAAGA-------- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1182890 38 + 81552678 GCAGAAAACTCC--------AGGGCTCCCCAGGGTGGCACTGAAGA-------- i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 3361 38 + 10392 GCAGAGAACTCC--------AGGGCTCCCTGGAGTGGCACTGAAGA-------- i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 3502 38 - 11164 GCAGAGAACTCC--------AGGGCTCCCTGGAGTGGCACTGAAGA-------- i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1505775 38 + 3644372 GCAGAGAACTCC--------AGGGCTCCCTGGAGTGGCACTGAAGA-------- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1460785 38 - 10304083 GCAGAGAACTCC--------AGGGCTCCCTGAAGTGGCACTAAAGA-------- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1539612 38 - 107702431 GCAGAGAACTCC--------AGGGCTCCCTGGAGTGGCACTGAAGA-------- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1032418 38 - 2200435 GCAGAGAACTCC--------AGGGCTCCCTGGAGTGGCACTGAAGA-------- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1458322 46 - 13651311 GCAGAGAACTCCACTCTCAGAGAACTCCCTGGAGTGGCACTGAAGA-------- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1447010 38 - 108792865 GCAGAGAACTCT--------GGGGCTCCCTGGGGCAGCACTGAAGA-------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1276525 38 - 7082604 GCAGAGAACTCC--------GGGGCTCCCTGAAGCAGCACTGAAGA-------- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1370703 38 + 1864846 GCAGATAACTCT--------GGGGCTCCCTGGGGCAGCACTGAAGA-------- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 188463 38 + 287728 GCAGAGAACTCC--------AGGGCTTCCTGGGGCAGCACTGGAGA-------- i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1806943 46 + 4416731 gtggagaaccac--------aggggccttcgtggtattgctgagtgacatgtga i dasNov3.JH576208 I 1877 C 0 e otoGar3.GL873658 965825 540 + 5252280 I e panPan2.chr2A 1428313 195 + 114371477 I e panTro5.chr2A 1500488 13442 + 111504155 I a score=1446643.000000 s hg38.chr2_KI270774v1_alt 196978 163 + 223625 GGTCGGAAAGCCA---------------CTCCGGCAGCAGCC--------------GTGACC-TTTGTGATGCCCCCGTAGGACATGCAGGGGCTTC---AGGACCTGTCTCAGCTGGGT-------------------------------------ATCTCCCAGAAGCACACAGCCTTCAATCTGGTTCCAAGCGGATTTACTGGCTCTTGAAA-TTGAAAATGCCAAGAAA s panTro5.chr2A 110007535 200 - 111504155 GGTCGGAAAGCCA---------------CTCCGGCAGCAGCT--------------GTGACC-TTTGTGATGCCCCCGTAGGACATGCAGGGGCTTC---AGGACCTGTCTCAGCTGGGTGTACATGCAGGGGCTTCAGGACCTGTCTCAGCTGGGCATCTCCCAGAAGCACACAGCCTTCAATCTGGTTCCAAGCGGATTTACTGGCTCTTGAAA-TTGAAAATGCCAAGAAA i panTro5.chr2A I 11 C 0 s panPan2.chr2A 1428508 200 + 114371477 GGTCGGAAAGCCA---------------CTCCGGCAGCAGCT--------------GTGACC-TTTGTGATGCCCCCGTAGGACATGCAGGGGCTTC---AGGACCTGTCTCAGCTGGGTGTACATGCAGGGGCTTCAGGACCTGTCTCAGCTGGGCATCTCCCAGAAGCACACAGCCTTCAATCTGGTTCCAAGCGGATTTACTGGCTCTTGAAA-TTGAAAATGCCAAGAAA i panPan2.chr2A I 195 C 0 s gorGor5.CYUI01015607v1 1456485 163 + 1464242 TGTCGGAAAGCCA---------------CTCTGGCAGCAGCC--------------GTGACC-TTTGTGATGCCCCTGTAGGACATGCAGGGGCTTC---AGGACCTGTCTCAGCTGGGT-------------------------------------ATCTCCCAGAAGCACACAGCCTTCAATCTGGTTCCAAGCGGATTTACTGGCTCTTGAAA-TTGAAAATGCCAAGAAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1182928 163 + 81552678 GGTTGGAAAGCCA---------------CTGTGGCAGCAGCT--------------GTGACC-TTTGCGATGCCCCCGTAGGACATGCAGGGGCTTC---AGGACCTGTCTCAGCTGGGT-------------------------------------ATCTCCCAGAAGCACACAGCCTTCAATCTGGCTCCAAGTGGATTTACTGGCTCTTGAAA-TTGAAAATGCCAAGAAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 3399 163 + 10392 GGTCAGGAAGCCA---------------CTCTGGCAACAGCT--------------GTGACC-TTGGCGATGCCCCCGTAGGACATACAGGGGCTTC---GGGGCCTATCTCAGCCGGGA-------------------------------------ATCCCCCAGCAACACACAGCCTTAAATCTGGCTCCAGGCGCAGTTACTGGTTCTTGAAA-TTGCAAATGCCAAGAAA i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 3540 163 - 11164 GGTCAGGAAGCCA---------------CTCTGGCAACAGCT--------------GTGACC-TTGGCGATGCCCCCGTAGGACATACAGGGGCTTC---GGGGCCTGTCTCAGCCGGGA-------------------------------------ATCCCCCAGCAACACACAGCCTTAAATCTGGCTCCAGGCGCAGTTACTGGTTCTTGAAA-TTGCAAATGCCAAGAAA i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1505813 163 + 3644372 GGTCAGAAAGCCA---------------CTCTGGCAACAGCT--------------GTGACC-TTGGCGATGCCCCCGTAGGACATACAGGGGCTTC---GGGGCCTGTCTCAGCCGGGA-------------------------------------ATCCCCCAGCAACACACAGCCTTAAATCTGGCTCCAGGCGCAGTTACTGGTTCTTGAAA-TTGCAAATGCCAAGAAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1460823 163 - 10304083 GGTCAGGAAGCCA---------------CTCTGGCAGCAGCT--------------GTGACC-TTGGCGATGCCCCCGTAGGACATACAGGGGCTTC---GGGGCCTGTCTCAGCCGGGA-------------------------------------ATTCCCCAGCAACACACAGCCTTAAATCTGGCTCCAGGCGCAGTGACTGGTTCTTGAAA-TTGAAAATGCCAAGAAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1539650 163 - 107702431 GGTCAGGAAGTCA---------------TTCTGGCAGCAGCT--------------GTGACC-TCTGCGATGCCCCCGTAGGACATACAGGGGCTTC---AGGGCCTGTCTCAGCCGGGA-------------------------------------ATCCCCCAGCAACACACAGCCTTAAATCTGGCTCCAGGCGCAGTTACTGGTTCTTGAAA-TTGAAAATGCCAAGAAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1032456 163 - 2200435 GGTCAGGAAGCCA---------------CTCTGGCAGCAGCT--------------GTGACC-TTGGCGATGCCCCCGTAGGACATACAGGGGCTTC---GGGGCCTGTCTCAGCCGGGA-------------------------------------ATCCCCCAGCAACACACAGCCTTAAATCTGGCTCCAGGCGCAGTTACTGGTTCTTGAAA-TTGAAAATGCCAAGAAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1458368 163 - 13651311 GGTCAGAAAGCCA---------------CTCTGGCAGCAGCT--------------GTGACC-TTTGCGATGCCCCCGTAGGACATGCAGGGGCTTC---AGGGCCTGTCTCAGCCGGGA-------------------------------------ATCCCCCAGCAACACACAGCCTTAAATCTGGCTCCAGGCGCAGTTACTGGTTCTTGAAA-TTGAAAATGCCAAGAAA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1447048 162 - 108792865 GGTCAGAAAGCCA---------------CCCTTGCAGTCACTG-------------GTGACCTTTTGTGATGCCACCGTAGGACGTGCAGGGACTTC---AGGGCCTGTCTC---AGGA--------------------------------------AACTCCCAGCAGCACACAGCCTTACATCTGGCTCCAAGTGGATTTACTGGCTTTTGAAACCTGCAAATGCCAAGAAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1276563 163 - 7082604 CGTCAGAAAGCCA---------------CCCTGACAGCCGCTG-------------GTGGCC-TTTGTGATGCCACTGTAGGACGTGCAGGGGCTTC---AGGGCCTGCCTCCATCAGG--------------------------------------ACCCCCCAGCAGCACACAACCTTCCATCTGGCTCCAAGTGGATTTACTGGCTCTTGCAA-CTGAAAATGCCAGGAAA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1370741 162 + 1864846 GGTCAGAAAGCCA---------------CCCCGGCAGCCGCTG-------------GTGACC-TTTGTGATGCCACCGTAGGACGTGCCGGGGCTTC---AGGGCCTGTCTCAGTCAGG--------------------------------------AAC-CCCAGCAGCACACAGCCTTCTGTCTCGCTCCAAGTGGATTTACTGGCTCTTGAAA-CTGAAAATGCCAAGAAA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 188501 162 + 287728 GGTCAGGAAGCCA---------------CCCCGGCGGCTGCTG-------------GTGACC-TTTGCGATGCCGCCGT-GGACGTGCGGGGACTTC---AGGGCCCGTCTCTGTCAGG--------------------------------------AACCTCCAGCAGCACACAGCCTTACATCTGGCTCCAAGTGGATTTATTGGCTCTTGAAA-CTGAAAATGCCAAGAAA i aotNan1.NW_018513311v1 C 0 I 2109 s dasNov3.JH576208 1806989 195 + 4416731 ggccaggagaccaggcgggtgaggtaggaccagGCAGAATCTGGAAAGCCGAGCCAATGAGT-TTTGAAACTGTCCTCTAGGAAATGTAAAGATTTTGAAAGAGTCTGTCTCACTCAGGA-------------------------------------ATCTCAAAGCAGCAAGTGGCATTAAACCTAACCTCGAATAAATATATCAGTACATGTAA-CTGATAATGTCATGAGA i dasNov3.JH576208 C 0 C 0 e otoGar3.GL873658 965825 540 + 5252280 I a score=196796.000000 s hg38.chr2_KI270774v1_alt 197141 29 + 223625 CAAAAATTTGGAGCAAAGAATAAAGG-AAA s panTro5.chr2A 110007735 29 - 111504155 CAAAAATTTGGAGCAAAGAATAAAGG-AAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1428708 29 + 114371477 CAAAAATTTGGAGCAAAGAATAAAGG-AAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1456648 29 + 1464242 CAAAAATTTGGAGCAAAGAATAAAGG-AAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1183091 29 + 81552678 GAAAAATTTAGAGCAAAGAATAAAGG-AAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 3562 30 + 10392 GAAAAGTTTGGAGCAAAGAATAAAGGAAAA i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 3703 30 - 11164 GAAAAGTTTGGAGCAAAGAATAAAGGAAAA i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1505976 30 + 3644372 GAAAAGTTTGGAGCAAAGAATAAAGGAAAA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1460986 30 - 10304083 GAAAAGTTTGGAGCAAAGAATAAAGGAAAA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1539813 30 - 107702431 GAAAAGTTTGGAACAAAGAATAAAGGAAAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1032619 30 - 2200435 GAAAAGTTTGGAGCAAAGAACAAAGGAAAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1458531 29 - 13651311 GGAAAGTTTGGAGCAAAGAAT-AAGGAAAA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1447210 29 - 108792865 GAAAATTTGGGAGCAAAGCATAATGGAAA- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1276726 29 - 7082604 GAAAATTTGGGAGCAAAGCATAAAGGAAA- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1370903 29 + 1864846 TAAAATTTGGGAGCAAAGCATAAAGGAAA- i cebCap1.NW_016107827v1 C 0 I 255 s dasNov3.JH576208 1807184 28 + 4416731 GAGAAAATTGAAGCAAAGGTTAATTAGA-- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 188663 2109 + 287728 I e otoGar3.GL873658 965825 540 + 5252280 I a score=942805.000000 s hg38.chr2_KI270774v1_alt 197170 166 + 223625 GTTTCTGCTGTGCGGCATCTG--GCCTTCCCCCTGCCCAGGCTCGTTTCACACTTTTGGGTAAACATGGAGCTGCTTACGTCCCTGCTGTGGGTCTGCCGTTTGCTGGTGTGAGGTG-------------GG-------------------CTTCAATCAGATGCTCGCCACGG--CCCAGGACGTGGCTCCTCCTCTCACT s panTro5.chr2A 110007764 163 - 111504155 GTTTCTGCTGTGCGGCATCTG--GCCTTCCCCCTTCCCAGGCTCGTTTCACACTTTTGGGTAAACATGGAGCTGCTTACGTCCCTGCTGTGGGTCTGCCGTTTGCTGGTGGGAGGTG-------------GG-------------------CTTCAATCAGATGCTCACCACAG--CCCAGGACGTGGCTCCTC---TCACT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1428737 163 + 114371477 GTTTCTGCTGTGCGGCATCTG--GCCTTCCCCCTTCCCAGGCTCGTTTCACACTTTTGGGTAAACATGGAGCTGCTTACGTCCCTGCTGTGGGTCTGCCGTTTGCTGGTGGGAGGTG-------------GG-------------------CTTCAATCAGATGCTCACCACAG--CCCAGGACGTGGCTCCTC---TCACT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1456677 166 + 1464242 GTTTCTGCTGTGCGGCATCTG--GCCTTCCCCCTGCCCAGGCTCGTTTCACGCTTTTGGGTAAACATGGAGCTGCTTACGTCCCTGCTGTGGGTCTGCCGTTTGCTGGTGGGAGGTG-------------GG-------------------CTTCAATCAGATGCTCGCCACGG--CCCAGGACGTGGCTCCCCCTCTCACT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1183120 166 + 81552678 GTTTCTGCTGTGTGGCATCTG--GCCTTTCCCCTGCCCAGGCTCATTTCACACTTTTGGGTAAACATGGAGCTGCTTACGTCCCTGCTGTGGGTCTGCCATTTGCTGGTGTGAGGTG-------------GG-------------------CTTCACTCAGATGCTCGCCACGG--CCCGGGACGTGGCTCCTCCTCTTACT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 3592 164 + 10392 GTTTCTGCTGTGCGGCATCTG--GCCTTTCCTTGGCCCGGGCTCATTT--CACTTTCGGGTAGACATGGAGCTGCTTACGTCCCTGCTGTGCGTCTGCCGTTTGCTGGTGTGAGGTG-------------GG-------------------CTTCAATCAGATGCTCGCCATGG--CCCAGCACGTGGCTCCTCCTCTTACT i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 3733 164 - 11164 GTTTCTGCTGTGCGGCATCTG--GCCTTTCCTTGGCCCGGGCTCATTT--CACTTTCGGGTAGACATGGAGCTGCTTACGTCCCTGCTGTGCGTCTGCCGTTTGCTGGTGTGAGGTG-------------GG-------------------CTTCAATCAGATGCTCGCCATGG--CCCAGCACGTGGCTCCTCCTCTTACT i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1506006 164 + 3644372 GTTTCTGCTGTGCGGCATCTG--GCCTTTCCTTGGCCCGGGCTCATTT--CACTTTCAGGTAGACATGGAGCTGCTTACGTCCCTGCTGTGCGTCTGCCGTTTGCTGGTGTGAGGTG-------------GG-------------------CTTCAATCAGATGCTTGTCATGG--CCCAGCACGTGGCTCCTCCTCTTACT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1461016 166 - 10304083 GTTTCTGCTGTGCGGCATCTG--GCCTTTCCTCGGCCCGGGCTCATTTCACACTTTCGGGTAGACATGGAGCTGCTTACGCCCCTGCTGTGCGTCTGCCGTTTGCTGGTGTGAGGTG-------------GG-------------------CTTCAATCAGATGCTCGCCATGG--CCCAGCACGTGGCTTCTCCTCTTACT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1539843 166 - 107702431 GTTTCTGCTGTGCGGCGTCTG--GCCGTTCCTCGGCCCGGGCTCATTTCACACTTTCGGGTAGACATGAAGCTGCTTACGTCCCTGCTGTGCGTCTGCCGTTTGCTGGTGTGAGGTG-------------GG-------------------CTTCAATCAGATGCTCGCCATGG--CCCAGCACGTGGCTCCTCCTCTTACT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1032649 166 - 2200435 GTTTCTGCTGTGCGGCATCTG--GCCTTTCCTCGGCCCGGGCTCATTTCACACTTTCGGGTAGACATGGAGCTGCTTACGTCCCTGCTGTGCGTCTGCCGTTTGCTGGTGTGAGGTG-------------GG-------------------CTTCAATCAGATGCTCGCCATGG--CCCAGCACGTGGCTCCTCCTCTTACT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1458560 160 - 13651311 GTTTCTGCGGTGCGGCATCTG--GCCTTTCCTCTGCCCGGGCTCATTTCACGCTTTTGGGTAGACACGGAGCTGCTTACGTCCCTGCTGTGCATCTGCCGTTTGCTGGTGTGAGGTG-------------GG-------------------CTTCAATCAGATGCTCGCCATGG--CCCAGCACGTGGCTCCTCCT------ i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1447239 114 - 108792865 ----------------AGCTG-------------------------------CTTTTGGGTAAACATGGAGCTGCTCACCTGCTTGCTGCG-GCCTGCCGTTTGCTGGCGTGCAGTG-TGGAACTGGAGAGG--------------------------CTGACGCT-GCCACTG--CCCAAGATG-----CCTCCTC----- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1276755 136 - 7082604 ----------------AGCTG-------------------------------CTTTCGGGTAAACACGGAGCGGCTCTCCT-----------GCCTGCCGCTTGCTGGCCTGCAGTGATGGACCTGGAGAGGCGGAGGGGCCCAGGATCTGCTTCAGTCCGACGCT-GCTGCTG--CCCACAACACTGCTCCTCCTT----- i saiBol1.JH378218 C 0 C 0 s dasNov3.JH576208 1807212 164 + 4416731 GTTTATGACACTAAATATTTCCTCTCTTTTCTCCACTCCATCTT-TTTCACATTTTCGCCTAAACGTAGAGCATTTTACTACCCCCTTGGATGGCT--CTTTTGTTCATTTCATGTT-------------GG-------------------CTTCATTCAGATTCTCAACTCTGTCCCCAGAACTTGGGTTCTTCATCT--- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 188663 2109 + 287728 I e cebCap1.NW_016107827v1 1370932 255 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I a score=511160.000000 s hg38.chr2_KI270774v1_alt 197336 60 + 223625 CAAGGCT-CTGATGTCAGATGCCTGGCTTTGCTGGTTTTTGAAGTTCCACAGGTGGCC--------CCT s panTro5.chr2A 110007927 60 - 111504155 CAAGGCT-CTGATGTCAGATGCCTGGCTTTGCTGGTTTTTGAAGTTCCACAGGTGGCC--------CCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1428900 60 + 114371477 CAAGGCT-CTGATGTCAGATGCCTGGCTTTGCTGGTTTTTGAAGTTCCACAGGTGGCC--------CCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1456843 60 + 1464242 CAAGGCT-CTGATGTCAGATGCCTGGCTTTGCTGGTTTTTGAAGTTCCACAGGTGGCC--------CCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1183286 60 + 81552678 CAAGGCT-CTGATGTCAGATGCTTGGCTTTGCTGGTTTTTGAAGTTCCACAGGTGGCC--------CCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 3756 68 + 10392 CAAGGCT-CTGATGTCAGATGCTTGGCTTTGCCAGTTTTTGAGGTTCCACAGGTGGCCCCTGAAAACCT i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 3897 68 - 11164 CAAGGCT-CTGATGTCAGATGCTTGGCTTTGCCAGTTTTTGAGGTTCCACAGGTGGCCCCTGAAAACCT i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1506170 68 + 3644372 CAAGGCT-CTGATGTCAGATGCTTGGCTTTGCCAGTTTTTGAGGTTCCACAGGTGGCCCCTGAAAACCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1461182 68 - 10304083 CAAGGCT-CTGATGTCAGATGCTTGGCTTTGCCAGTTTTTGAGGTTCCACAGGTGGCCCCTGAAAACCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1540009 68 - 107702431 CAAGGCT-CTGATGTCCGATGCTCGGCTTTGCCAGTTTTTGAGGTTACACAGGTGACCCCTGAAAACCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1032815 68 - 2200435 CAAGGCT-CTGATGTCAGATGCTTGGCTTTGCCAGTTTTTGAGGTTCCACAGGTGGCCCCTGAAAACCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1458720 55 - 13651311 --------------TCCGATGCTTGGCTTTGCCAGTTTTTGAGGCTCCACAGGTGGTCCCTGAAAACCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1447353 60 - 108792865 CAAGGCC-CTGGCATCAGATGCTTGGCTTTGCTGGTGTTTGAGGTTCCACAAGTGGCC--------CCT i calJac3.chr14 C 0 I 8 s saiBol1.JH378218 1276891 60 - 7082604 CAGGGCC-CAGGCATCAGATGTTTGGCTTTGCCGGTGTTTGAGGTTCCGCAGGTGGCC--------CCT i saiBol1.JH378218 C 0 I 8 s aotNan1.NW_018513311v1 190772 60 + 287728 CAAGGCC-CTGGCGTCAGGTGCTTGGCTTTGCCGGTGTTTGAGGTTCCACAGGTGGCC--------CCT i aotNan1.NW_018513311v1 I 2109 I 59 s dasNov3.JH576208 1807376 69 + 4416731 CAGGGTTCCTGCTGCCAGATGTTTTCCTTTGTGATTATTTCAGAGTCCACAGGTGGTCCTTAGAAATCT i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1370932 255 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I a score=225684.000000 s hg38.chr2_KI270774v1_alt 197396 33 + 223625 CCAGCCC-AAGTTTCTCAGAACCAAATCCAG---------------------CCG s panTro5.chr2A 110007987 33 - 111504155 CCAGCCC-AAGTTTCTCAGAACCAAATCCAG---------------------CCG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1428960 33 + 114371477 CCAGCCC-AAGTTTCTCAGAACCAAATCCAG---------------------CCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1456903 31 + 1464242 CCAGCCC---GTTTCTCAGAACCAAATCCAG---------------------CCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1183346 54 + 81552678 CCAGCCC-AAGTTTCTCAGAACCAAATCCAGCAGGAAGGGGGAGTCCCCCTCCCG i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 3824 54 + 10392 CTAGCCC-AAGTTTCTCAGAACCAAATCCAGCAGGAAGGGTGAATCCCCCTCCCA i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 3965 54 - 11164 CTAGCCC-AAGTTTCTCAGAACCAAATCTAGCAGGAAGGGTGAATCCCCCTCCCA i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1506238 54 + 3644372 CTAGCCC-AAGTTTCTCAGAACCAAATCCAGCAGGAAGGGTGAATCCCCCTCCCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1461250 53 - 10304083 CTAGCCC-AA-TTTCTCAGAACCAAATCCAGCAGGAAGGGTGAGTCCCCCTCCCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1540077 53 - 107702431 CTAGCCC-AAGTTGCTCAGACCCAAATCCAGCAGGAAGGGTGAGT-CCCCTCCCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1032883 53 - 2200435 CTAGCCC-AA-TTTCTCAGAACCAAATCCAGCAGGAAGGGTGAGTCCCCCTCCCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1458775 54 - 13651311 CTAGCCC-AAGTTGCTCAGAACCAAATCCAGCAGGAAGGGTGAGTCCCCCTCCCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1447421 51 - 108792865 CCAGCCG-AAGCCTC---AAACCAAGTCAGGCAGGAAGCATAAGTTCCCCTCCCT i calJac3.chr14 I 8 C 0 s saiBol1.JH378218 1276959 51 - 7082604 CCAGCCC-GAGCCTC---AGACCAAGTCAGGCAGGAAGCATAAGTTCCCCTCCCT i saiBol1.JH378218 I 8 C 0 s dasNov3.JH576208 1807445 34 + 4416731 CAAGCTCTTATTCTCTCAGAATCAAATCTGGTGG--------------------- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 190832 59 + 287728 I e cebCap1.NW_016107827v1 1370932 255 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I a score=4371226.000000 s hg38.chr2_KI270774v1_alt 197429 500 + 223625 ----------------------GAAATGTCAAACACC--------AATTCCAGAATGAATTTCCAC-GGctgccctgtcctgactgccctgacctgg--cctgtgcttacctgG----AATTCC---CACCCAGG---------CCTCGATCAGCTCAGCCTTCCCCGCACCCCCAGCCCCAGGCACACAGGCGGAGCCCCCACCTCTAGCAGCCATGGGGG--TGAGAGCGAG-TAGCAGCAGA--TGGAAACAAGAACCCAGCCTCTTTCTGGATGCAGGAGGAGCG-GCATCCCAGGGCCAGCAAGCAGCT-CTGCTCCCCATGGGCTTTTAGCAAGAGGCTGGTGTGCTCA-GGTTGCCCTGCA--------GACTCCCCTGCGTCTGT--GAAAGGTGGCA-GGAAGGAGATCCTGGAGGCGGGAGGATGGTTAGAGGA-------GCCCAGGAGGAAAAGTCATGAG-GTGCAAAGGCTAAGAGGACAGGATCGTTTTGGAGAAACAGTCAGGATGCGCATTTAGGGTTTATTCATTCATTC-TTGTATCCAACAAATGCTTGCTGAGTGT s panTro5.chr2A 110008020 500 - 111504155 ----------------------GAAATGTCAAACACC--------AATTCCAGAATGAATTTCCAC-GGctgccctgtcctgactgccctgacctgg--cctgtgcttacctgG----AATTCC---CACCCAGG---------CCTCGATCAGCTCAGCCTTCCCCGCACCCCCAGCCCCAGCTGCACAGGCGGAGCCCCCACCTCTAGCAGCCATGGGGG--TGAGAGCGAG-TAGCAGCGGA--TGGAAACATGAACCCAGCCTCTTTCTGGATGCAGGAGGAGCG-GCGTCCCACAGCCAGCAAGCAGCT-CTGCTCCCCATGGGCTTTTAGCAAGAGGCTGGTGTGCTCA-GGTAGCCCTGCA--------GACTCCCCTGCGTCTGT--GAGAGGTGGCA-GGAAGGAGATCCTGGAGGCGGGAGGATGGTTAGAGGA-------GCCCAGGAGGAAAAGTCATGAG-GTGCAAAGGCTAAGAGGACAGGATCGTTTTGGAGAAACAGTCAGGATGTGCATTTAGCGTTTATTCATTCATTC-TTGTATCCAACAAATGCTTGCTGAGTGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1428993 500 + 114371477 ----------------------GAAATGTCAAACACC--------AATTCCAGAATGAATTTCCAC-GGctgccctgtcctgactgccctgacctgg--cctgtgcttacctgG----AATTCC---CACCCAGG---------CCTCGATCAGCTCAGCCTTCCCCGCACCCCCAGCCCCACCTGCACAGGCGGAGCCCCCACCTCTAGCAGCCATGGGGG--TGAGAGCGAG-TAGCAGCGGA--TGGAAACATGAACCCAGCCTCTTTCTGGATGCAGGAGGAGCG-GCGTCCCACGGCCAGCAAGCAGCT-CTGCTCCCCATGGGCTTTTAGCAAGAGGCTGGTGTGCTCA-GGTAGCCCTGCA--------GACTCCCCTGCGTCTGT--GAGAGGTGGCA-GGAAGGAGATCCTGGAGGCGGGAGGATGGTTAGAGGA-------GCCCAGGAGGAAAAGTCATGAG-GTGCAAAGGCTAAGAGGACAGGATCGTTTTGGAGAAACAGTCAGGATGTGCATTTAGCGTTTATTCATTCATTC-TTGTATCCAACAAATGCTTGCTGAGTGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1456934 499 + 1464242 ----------------------GAAATGTCAAACACC--------AATTCCAGAATGAATTTCCAC-GGctgccctgtcctgactgccctgacctgg--cctgtgcttacctgG----AATCCC---CACCCAGG---------CCTTGATCAGCTCAGCCTTCCCCGCACCCCCAGCCCCAGCTGCACAGGCGGAGCCCCCACCTGTAGCAGCCATGGGGG--TGAGAGCGAG-TAGCAGCGGA--TGGAAACATGAACCCAGCCTCTTTCTGGATGCAGGAGGAGCG-GCGTCCCACGGCCAGCAAGCAGCT-CTGCTCCCCATGGGCTTTTAGCAAGAGGCTGGTGTGCTCA-GGTTGCCCTGCA--------GACTCCCCTGCGTCTGT--GAGAGGTGGCA-GGAAGGAGATCCTGGAGGCGGGAGGATGGTTAGAGGA-------GCCCAGGAGGAAAAGTCATGAG-GTGCAAAGGCTAAGAGGACAGGAT-GTTTTGGAGAAACAGTCAGGATGTGCATTTAGGGTTTATTCATTCATTC-TTGTATCCAACAAATGCTTGCTGAGTGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1183400 492 + 81552678 ----------------------GAAATGTCAAACACC--------AATTCCAGAATGAATTTCCAT-AGCAGCACTGTCCTGACTGCCCTGACCTGG--TCTGTGCTTACCTGG----AATCCC---CAGCCAGG---------CCTCCATCAGCTCAGCCTTCCCCGCACCCCCAGCCCCAGATGCACAGGCAGAGCCCCCACCTGTAGCAGCCATGGGGG--TGAGAGCAAG-TAGCAGCAGA--TGGAAACATGAACTCAGCCTCTTTCTGGATGTGGGAGGAGCG-GCGTCCCACAGCCAGCAAGCAGCT-CTGCTCTCCACAGGCTTTTAGCAAGAGGCTGGTGTGCTCA-GTCTGCCCTGCA--------GACTCTCCTGCGTTTGT--GAGAGGTGGCA-GAAAGGAGATCCCGGAGGCAGGAGGATGGTTAGAGAA-------GCCCAGGAGAAAAAATCATGAG-GTGCAAAGGCTAAGAGGACAGGATCGTTTTGGAGAAA----CAGGATGTGCATTTAGAATTTATTCATTCATTC-TTGTATCCAACAAA----TGCTGAGTGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 3878 480 + 10392 ----------------------GAAATGTCAAACATC--------AATTCCAGAACGAATTTCCAT-GGCTGCGCTGTCCTGACTGCCCTCACCTGG--TCTGTGCTTACCTGG----AATCCC---CACCCAGG---------CCTCGATTGGCTCAGCTTTCCCCGCACAGCCAGCCCCAGCAGCACAGGCGGAGCCCCCACCTGTAGTAGCCATGGGGG--TGAG-----------------------AACATGAACCCAGCCTCTTTCCGGATGTGGGAGGAGCG-GCGTCCCACGGCCAGCAAGCTGCT-CTGCTCTCCACGGACTTTTAGCAAGAGGCCGGTGTGCTCA-GGTTGCCCTGCA--------GACTCTCCTGCGTCTGT--GAGAGGTGGCA-GGAAGGAGATCCTGGAGGCGGGAGGATGGTTAGAGGA-------GCCCAGGAGGAAAAGTCATGAG-GTGCAAAAGCTAAAAGGACAGGATCGTTTTGGAGAAACAGTCAGGATGTGCATTTAGGATTTATTCATTCATTC-TTGTGTCCACCAAATACTTGCTGAGTGT i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 4019 480 - 11164 ----------------------GAAATGTCAAACATC--------AATTCCAGAACGAATTTCCAT-GGCTGCGCTGTCCTGACTGCCCTCACCTGG--TCTGTGCTTACCTGG----AATCCC---CACCCAGG---------CCTCGATCGGCTCAGCCTTCCCCGCACAGCCAGCCCCAGCAGCACAGGCGGAGCCCCCACCTGTAGTAGCCATGGGGG--TGAG-----------------------AACATGAACCCAGCCTCTTTCCGGATGTGGGAGGAGCA-GCGTCCCACGGCCAGCAAGCTGCT-CTGCTCTCCACGGACTTTTAGCAAGAGGCCGGTGTGCTCA-GGTTGCCCTGCA--------GACTCTCCTGCGTCTGT--GAGAGGTGGCA-GGAAGGAGATCCTGGAGGCGGGAGGATGGTTAGAGGA-------GCCCAGGAGGAAAAGTCGTGAG-GTGCAAAAGCTAAAAGGACAGGATCGTTTTGGAGAAACAGTCAGGATGTGCATTTAGGATTTATTCATTCATTC-TTGTGTCCACCAAATACTTGCTGAGTGT i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1506292 480 + 3644372 ----------------------GAAATGTCAAACATC--------AATTCCAGAACGAATTTCCAT-GGCTGCGCTGTCCTGACTGCCCTCACCTGG--TCTGTGCTTACCTGG----AATCCC---CACCCAGG---------CCTCGATCGGCTCAGCCTTCCCCGCACAGCCAGCCCCAGCAGCACAGGCGGAGCCCTCACCTGTAGTAGCCATGGGGG--TGAG-----------------------AACATGAACCCAGCCTCTTTACGGATGTGGGAGGAGCG-GCGTCCCACGGCCAGCAAGCTGCT-CTGCTCTCCACGGACTTTTAGCAAGAGGCCGGTGTGCTCA-GGTTGCCCTGCA--------GACTCTCCTGCGTCTGT--GAGAGGTGGCA-GGAAGGAGATCCTGGAGGCGGGAGGATGGTTAGAGGA-------GCCCAGGAGGAAAAGTCATGAG-GTGCAAAAGCTAAAAGGACAGGATCGTTTTGGAGAAACAGTCAGGATGTGCATTTAGGATTTATTCATTCATTC-TTGTGTCCACCAAATACTTGCTGAGTGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1461303 496 - 10304083 ----------------------GAAATGTCAAACATC--------AATTCCAGAACGAATTTCCAT-GGCTGCGCTGTCCTGACTGCCCTGACCTGG--TCTGTGCGTACCTGG----AATCCC---CACCCAGG---------CCTCGATCGGCTCAGCCTTCCCCGCACGGCCAGCCCCAGCAGCACAGGCGGAGCCCCCACCTGTAGTAGCCATGGGGG--TGAGAACGAG-TAGCAGCGGA--TGGAAACATGAACCCAGCCTCTTTCCGGATGTGGGAGGAGCG-GCGTCCCACGGCCAGCAAGCTGCT-CTGCTCTCCACGGACTTTTAGCAAGAGGCCGGTGTGCTCG-GGTTGCCCTGCA--------GACTCTCCTGCGTCTGT--GAGAGGTGGCA-GGAAGGAGATCCTGGAGGCGGGAGGATGGTTGGAGGA-------GCCCAGGAGGAAAAGTCATGAG-GTGCAAAAGCTAAAAGGACAGGATCGTTTTGGAGAAA----CAGGATGTGCATTTAGGATTTATTCATTCATTC-TTGTATCCACCAAATACTTGCTGAGTGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1540130 500 - 107702431 ----------------------GAAATGTCGAACATC--------AATTCCAGAATGAATTTCCAT-GGCTGTGCTGTCCTGACGGCCCTCACCTGG--CCTGTGCTTACCTGG----AATCCC---CACCCAGG---------CCTGGATCGGCTCAGCCTTCCCCGCACGGCCAGCCCCAGCAGCACAGGCGGAGCCCCCACCTGTAGTAGCCATGGGGG--CGAGAACGAG-TAGCAGCGGA--TGGAAGCATGAACCCAGCCTCTCTCTGGATGTGGGAGGAGCG-GCGTCCCACGGCCAGCAAGCTGCT-CTGCTCTCCACGGACTTTTAGCAGGAGGCCGGTGTGCTCA-GGTTGCCCTGCA--------GACTCGCCTGCGTCTGT--GAGAGGTGGCA-GGAAGGAGATCCTGGAGGCAGGAGGATGGTTAGAGGA-------GCCCAGGAGGAAAAGTCATGAG-GTGCAAAAGCTAAAAGGACAGGATCGTTGTGGAGAAACAGTCAGGATGTGCATTTAGGATTTATTCATTCATTC-TTGTATCCACCAAATACTTGCTGAGTGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1032936 500 - 2200435 ----------------------GAAATGTCAAACATC--------AATTCCAGAACGAATTTCCAT-GGCTGCGCTGTCCTGACTGCCCTGACCTGG--TCTGTGCGTACCTGG----AATCCC---CACTCAGG---------CCTAGATCGGCTCAGCCTTCCCCGCACGGCCAGCCCCAGCAGCACAGGCGGAGCCCCCACCTGTAGTAGCCATGGGGG--TGAGAACGAG-CAGCAGCCGA--TGGAAACATGAACCCAGCCTCTTTCCGAATGTGGGAGGAGCG-GCGTCCCACGGCCAGCAAGCTGCT-CTGCTCTCCACCGACTTTTAGCAAGAGGCCGGTGTGCTCA-TTTTGCCCTGCA--------GACTCTCCTGCGTCTGT--GAGAGGTGGCA-GGAAGGAGATCCTGGAGGCGGGAGGATGGTTAGAGGA-------GCCCAGGAGGAAAAGTCATGAG-GTGCAAAAGCTAAAAGGACAGGATCGTTTTGGAGAAACAGTCAGGATGTGCATTTAGGATTTATTCATTCATTC-TTGTATCCACCAAATACTTGCTGAGTGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1458829 507 - 13651311 ----------------------GAAATGGCAAACACCAATTCCAGAATTCCAGAATGAATTTCCAT-GGctgtgctgtcctgactgccctgacctgg--cctgtgctTA-CTGG----AATCCC---CACCCAGG---------CCTCAATCAGCTCAGCCTTCCCCGCACAGCCAGCCCCGGCAGCACAGACGGACCCCCACCCTGTGGCAGCCATGGGGG--TGAGAGCGAG-TAGCAGCGGA--TGGAAACATGAACCCAGCCTCTTTCCGGATGTGGGAGGAGCG-GCGTCCCACGGCCAGCAAGCAGCT-CTGCTCTCCACAGACTTTTAGCAAGAGGCCAGTGTGCTCA-GGTTGCCCTGCA--------GACTCTCCTGCGTCTGT--GAGAGGTGGCA-GCAAGGAGATCCTGGAGGCGGGAGGATGGTTAGAGGA-------GCCCAGGAGGAAAAGTCATGAG-GTGCAAAGGCTAAAAGGACAGGACCATTTTGGAGAAACAGTCAGGATGTGCATTTAGGATTTATTCATTCATTC-TTGTATCCACCAAATACTTGCTGAGTGT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1447472 487 - 108792865 ----------------------GAAACGTCAAACACC--------GGTTCCAGAATGAATTGCCAT-GTCTGTGCC-TCCTGACTGCCCTGAGCTGG--CCTGTGCTTACCTGG-ACCAATTCC---CATCCAGG---------GCT-GGTCAGCTCAGCCTTCTCCACAC-CCCAGCCCCGGCTGCACAGGCGGAGCCCCCACCAGTAGCATCCGTGGGGG--TGGGAGTGGG-TAGCAGCAGA--TGGAAACATGATCCTGGCTGCCTCCTGGGTGCAGGAGGAGTG-GGGTCCCACGGCCCGCAAGCAGCT--TGCTCTCCACGGGCTTTCAGCAAGAGGCTGGCGTGTGCA-GGTTGCGCTGTG--------GACTCTCCCGTG-CTGT--GACAGGTAGAA-GGAAGGAGGCCCTGGAGG-AGGAGGATGGTTAGAGGA-------GGCCAGCAGGAAAAGTCGGGAG-GTGCAAAGGCTGAAAAGACAAAATCATTTGAGAGAAACACTCGGG------ATTTAGG----ATTCATTCATTC-TTGCATCCCACAAATACTTGCTGAATGT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1277010 465 - 7082604 ----------------------GAAACGTCAAACATC--------AGCTCCAGAATGAAACGCCAT-AGC--------------------GAGCTGG--CCTGTGCTTACCTGG-ACCAATTCC---CATCCAGG---------GCC-GGTCAGCTCAGCCTTCTCCACAC-CCCAGCCCTGGCTGCACAGGCGGAGCCCCCACCCATAGCGACTGCGGGGG--TGGGAGTGAA-TAGCAGCAGA--TGGAAACGTGAGCCTGGCCTCCTTCCGGGTGCAGGAGGA--G-GGGTCCCACGGCCCGCAAGCTGCT--GGCTCTCCACGGGCTTTCAGCAAGAGGCTGGCATGTGCA-GGTTGCACCGTG--------GAGTCTCCCGTG-CTGT--GACAGGTGGAA-GGAAGGAGGCCCTGGAGG-AGGAGGATGGTTAGAGGA-------GGCCAGGAGGAAAGGTTGGGAG-CTGCAAAGGCTGACGGGACAGAATCCTTTGAGAGAAGCACTCGGG------ATTTAGG----GTTCATTCATTC-TTGTATCCAACAAATACTTGC-GAATGT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1371187 480 + 1864846 ----------------------GAAACGTCAAACATC--------AGCTCCAGAATGAAATgccgt-ggctgtgccgtcctgactgccctgggctgg--cctgtgcctacctgg-ACCAATTCC---CATCCAGT---------GCT-GGTCAGCTCAGCCTTCTCCACA--GCCAGCCCCGGCTGCACAGGCGGAGCCCCCACCAGCAGCGTCCGTGGGAG--TGAGA-------AGCAGCAGA--CGGAAACATGAACCTGGCCTCCTTCCGGGTGCGGGAGAAGTG-GGGTCCCATGGCCCACAAGCAGCT--GGCTCTCCACGGGCTTTCAGCAAGAGGCTGGCGTGCGCG-GGCTGCACCGTG--------GACTCTCCCGTG-CTGT--GACaggtggaa-ggaaggaggctctggagg-aggaggatggttagagga-------ggccaggaggaAAAGTTGGGAG-GTGCCAAGGCTGAAAGGGCAGAATCGTTTGAGAGAAACACTCAGG------ATTTAGG----ATTCATTCGTTC-TTGTATCCAACAAATACTTGC-GAATGT i cebCap1.NW_016107827v1 I 255 C 0 s aotNan1.NW_018513311v1 190891 487 + 287728 ----------------------GAAACGTCAAACACC--------AGTTCCGGAATGAAACGCCAT-GGCTGTGCTGTCCTGACTGCCCCGAGCTGG--CCTGTGCTTACCTGG-ACCAATTCC---CATCCAGG---------GCT-GGCCAGTTCAGCCTCCTCCACAC-CCCAGCCCCGGCTGCACGGGCGGAGTCCCCACCAGTAGCGTCCGTGGGGG--TGGGAGTGAG-TGGCAGCAGA--TGGAAACGTGAACCTGGCCTCCTTCCGGGTGCGGGAGGAGGG-GGGTCCCACGGCCCGCGAGCAGCT--CGCTCTCCACGGGCTTTCAGCAAGAGGCTGGCGTGCGCA-GGCTGCACTGTG--------GACTCTCCTGTG-CTGT--GGCAGGTGGAA-AGAAGGAGGCCCCGCAGG-AGGAGGATGCTTAGAGGA-------GGCCAGGAGGAAAAGTCACGAG--TGCAAAGGCTGAAAGGACAGAATCGTTTGAGAGAAACACTCAGG------ATTTAGG----ATTCATTCATTC-TTGTATCCAACAAATACTTGCTGAGTGT i aotNan1.NW_018513311v1 I 59 C 0 s dasNov3.JH576208 1807479 561 + 4416731 GAAAGGAAGAGGCCACCTCCCTGAGAGAGGAAATACA--------AATTCTAAAATTAAATTTTGCGGGTTGTgctgctctcactggtttgacttgggtcatctgcctgccctgaaccaatccctttcaccaagggaatatgactcctgatcgcctcagcggggt-cacag-gtcagcgtgagatacatgtgtggagtcacctcctcca--aaccgtaaggaactgggaaggggagaaaggCTGATCTCGAAGCATAAACTCAGCTTCTTTCTGGAAACAGGATGAGTGAATGATGGATGTCCAACAAGCTACTTTTTTTCTCTACAGTTTTTAAATAAGACAATGATATGGTCATGTTTGTGTTATAAATAGATTGATTATTCAGTGGCTGTGAGAGAGGTGGAATAAAAGAAAACTCTGGAGATGTAAGACCAGTGAGATAACTGTTTGACAAAGGAAGAAAAATCATGAGGGTGTAAACAGTGAAA----AGAATAGTTTTAGAGAAATATTTAGGATATCAAATTAGGATTTATTTGttcatccatttttttcaacaaacatttactgagtgt i dasNov3.JH576208 C 0 I 1444 e otoGar3.GL873658 965825 540 + 5252280 I a score=81864.000000 s hg38.chr2_KI270774v1_alt 197929 8 + 223625 CCAAGACC s panTro5.chr2A 110008520 8 - 111504155 CCAAGACC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1429493 8 + 114371477 CCAAGACC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1457433 8 + 1464242 CCAAGACC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1183892 8 + 81552678 CCAAGACC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 4358 8 + 10392 CCAAGACT i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 4499 8 - 11164 CCAAGACT i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1506772 8 + 3644372 CCAAGACT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1461799 8 - 10304083 CCAAGACC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1540630 8 - 107702431 CCAAGACC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1033436 8 - 2200435 CCAAGACC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1459336 8 - 13651311 CCAAGACC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1447959 8 - 108792865 CCAAGACC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1277475 8 - 7082604 TCAAGATC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1371667 8 + 1864846 CCAAGACC i cebCap1.NW_016107827v1 C 0 I 32 s aotNan1.NW_018513311v1 191378 8 + 287728 CCGAGACC i aotNan1.NW_018513311v1 C 0 C 0 e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1808040 1444 + 4416731 I a score=213978.000000 s hg38.chr2_KI270774v1_alt 197937 80 + 223625 CATGCGAGGAAGACAGCCACGGACACCACCTGTGTCTGGGCTGGGAAAGACCCATGATAGGAAGACAGCCATGGACACGA s panTro5.chr2A 110008528 80 - 111504155 CATGCGAGGAAGACAGCCACGGACACCACCTGTGTCTGGGCTGGGAAAGACCCATGATAGGAAGACAGCCATGGACACGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1429501 80 + 114371477 CATGCGAGGAAGACAGCCACGGACACCACCTGTGTCTGGGCTGGGAAAGACCCATGATAGGAAGACAGCCATGGACACGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1457441 80 + 1464242 CATGCGAGGAAGACAGCCACGGACACCACCTGTGTCTGGGCTGGGAAAGACCTATGATAGGAAGACAGCCATGGACACCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1183900 80 + 81552678 CATGGGAGGAAGACAGCCACGGATACCACCTGTGCCTGGGCTGGGAAAGACCCATGCTAGGAAGACAGCCATGGACACGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 4366 44 + 10392 CATGCTAGGAAGACAGTCATGGACACTACCTGTGTCTGGGCTGG------------------------------------ i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 4507 44 - 11164 CATGCTAGGAAGACAGTCATGGACACTACCTGTGTCTGGGCTGG------------------------------------ i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1506780 44 + 3644372 CATGCTAGGAAGACAGTCATGGACACTACCTGTGTCTGGGCTGG------------------------------------ i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1461807 44 - 10304083 CATGCTAGGAAGACAGTCATGGACACTACCTGTGTCTGGGCTGG------------------------------------ i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1540638 44 - 107702431 CATGCTAGGAAGACAGTCATGGACACTACCTGTGTCTGGGCTGG------------------------------------ i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1033444 44 - 2200435 CATGCTAGGAAGACAGTCATGGACACTACCTGTGTCTGGGCTGG------------------------------------ i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1459344 44 - 13651311 CATGCTAGGAAGACAGCCATGGACACTACCTGTGTCTGGGCTGG------------------------------------ i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1447967 32 - 108792865 GCTGCTAGGAGAACAACTGCAGG-------TGGGCACGG----------------------------------------- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1277483 32 - 7082604 GCTGCTAGGAGAACAGCTGCAGG-------TGGGCACGG----------------------------------------- i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 191386 32 + 287728 GCTGCTAGGAGAACAACTGCCGG-------TGGGCACAG----------------------------------------- i aotNan1.NW_018513311v1 C 0 C 0 e cebCap1.NW_016107827v1 1371675 32 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1808040 1444 + 4416731 I a score=125319.000000 s hg38.chr2_KI270774v1_alt 198017 31 + 223625 CCTGTGTCCGGGCTGCAAATGAGACACACCT s panTro5.chr2A 110008608 31 - 111504155 CCTGTGTCTGGGCTGCAAATGAGACACACCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1429581 31 + 114371477 CCTGTGTCTGGGCTGCAAATGAGACACACCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1457521 31 + 1464242 CCTGTGTCCAGGCTGCAAATGAGACACACCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1183980 31 + 81552678 CCTGTGTCTGGGCTGGAAATGAGACACACCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 4410 15 + 10392 ----------------AAATGAGACATACCT i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 4551 15 - 11164 ----------------AAATGAGACATACCT i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1506824 15 + 3644372 ----------------AAATGAGACATACCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1461851 15 - 10304083 ----------------AAATGAGACACACCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1540682 15 - 107702431 ----------------AGATGAGACACACCT i chlSab2.chr14 C 0 I 212 s manLeu1.NW_012103754v1 1033488 15 - 2200435 ----------------AAATGAGACACACCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1459388 15 - 13651311 ----------------AAACGAGACACACCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1447999 29 - 108792865 CCTGTGCCTGGGCTGGAAATGAGACACCT-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1277515 29 - 7082604 CCGGTGCCCGGGCTGGAAATGAGACACCT-- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1371707 29 + 1864846 CCTGTGCCTGGGCTGGAAATGAGACACCT-- i cebCap1.NW_016107827v1 I 32 C 0 s aotNan1.NW_018513311v1 191418 29 + 287728 CCTGGGCCTGGGCTGGAAATGAGACACCT-- i aotNan1.NW_018513311v1 C 0 C 0 e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1808040 1444 + 4416731 I a score=162208.000000 s hg38.chr2_KI270774v1_alt 198048 18 + 223625 GCAAATCATGCCCAGGTG s panTro5.chr2A 110008639 18 - 111504155 GCAAATCATGCCCAGGTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1429612 18 + 114371477 GCAAATCATGCCCAGGTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1457552 18 + 1464242 GCAAATCATGCCCAGGTG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1184011 18 + 81552678 ACAAATCATGCCCAGGCG i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 4425 18 + 10392 GCAAATCATGCCCAGGCG i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 4566 18 - 11164 GCAAATCATGCCCAGGCG i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1506839 18 + 3644372 GCAAATCATGCCCAGGCG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1461866 18 - 10304083 GCAAATCATGCCCAGGCG i cerAty1.NW_012000820v1 C 0 I 106 s chlSab2.chr14 1540909 18 - 107702431 GCAAATCATGCCCAGGCG i chlSab2.chr14 I 212 C 0 s manLeu1.NW_012103754v1 1033503 18 - 2200435 GCAAATCATGCCCAGGCG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1459403 18 - 13651311 GCAAATCATGCCCAGGCG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1448028 17 - 108792865 GCAGATCATG-CCGGGCG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1277544 17 - 7082604 GCACATCATG-CCAGGCG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1371736 17 + 1864846 GCAAATCGTG-CCAGGCA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 191447 17 + 287728 GCAGATCATG-CCAGGCG i aotNan1.NW_018513311v1 C 0 C 0 e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1808040 1444 + 4416731 I a score=631600.000000 s hg38.chr2_KI270774v1_alt 198066 73 + 223625 CTAAGTGGCACAGGGAACCGCAGTCACCCACAGACGCATTCATCACCGACTTTAAAAAATCCAGTGTGAGAAA s panTro5.chr2A 110008657 73 - 111504155 CTAAGTGGCACAGGGAACCGCAGTCACCCACAGACGCATTCATCACCGACTTTAAAAAATCCAGTGTGAGAAA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1429630 73 + 114371477 CTAAGTGGCACAGGGAACCGCAGTCACCCACAGACGCATTCATCACCGACTTTAAAAAATCCAGTGTGAGAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1457570 72 + 1464242 CTAAGTGGCACAGGGAACCGCAGTCACCCACAGACGCATTCATCACCGACTTT-AAAAATCCAGTGTGAGAAA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1184029 73 + 81552678 CTAAGTGGCACAGGGAACCGCAGTCACCCGCAGACGCATTCATCACTAACTTTAAAAAATCCAGTGTGAGAAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 4443 73 + 10392 CTAAGTGGCACAGGGAACTGCCGCCACCCACAGACGCATTCATCACTGACTTTAAAAAATCCAGTGTGAGAAC i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 4584 73 - 11164 CTAAGTGGCACAGGGAACTGCCGCCACCCACAGACGCATTCATCACTGACTTTAAAAAATCCAGTGTGAGAAC i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1506857 73 + 3644372 CTAAGTGGCACAGGGAACTGCCGCCACCCACAGACGCATTCATCACTGACTTTTAAAAATCCAGTGTGAGAAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1461990 68 - 10304083 CTAAGTGGCACAGGGAACTGCCGCCACCCACAGACGCATTCATCACTGACTTTAAAAAATCCAGCGTG----- i cerAty1.NW_012000820v1 I 106 C 0 s chlSab2.chr14 1540927 73 - 107702431 CTAAGTGGCACAGGGAACTGCCGCCACCCACAGACGTATTCATCACCGACTTTAAAAAATCCAGTGTGAGAAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1033521 68 - 2200435 CTAAGTGGCACAGGGAACTGCCGCCACCCACAGACGCATTCATCACTGACTTTAAAAAATCCAGTGTG----- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1459421 73 - 13651311 CTGAGTGGCACAGGGAACTGCCGCCACCCACAGACGCATTCATCACCGACTTCCAAAAATCCAGTGTGAGAAC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1448045 71 - 108792865 CTAACTGGCATGGGGAACTGCAGACGCCCACGGACGCACTCATCACCGATTTTCAGCAATCCAGCGTGAGA-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1277561 70 - 7082604 CTAACTGGCACGGGGAACCGCAGACGCCCACGGACGTACCCATCACCGATTTTCAATAATCCAGCGTGAG--- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1371753 73 + 1864846 CCAACTGGCACGGGGAGCCACAGACGCCCATGGACGCACTCATCACCGACTTTCAGCAATCCAGCGTGAGAAA i cebCap1.NW_016107827v1 C 0 I 17 s aotNan1.NW_018513311v1 191464 73 + 287728 CTAACTGGCACGGGGAACCGCAGACGCCCACGGACGCGCTCATCACCGATTTCCAACGATCCAGCGTGAGAAA i aotNan1.NW_018513311v1 C 0 C 0 e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1808040 1444 + 4416731 I a score=161167.000000 s hg38.chr2_KI270774v1_alt 198139 24 + 223625 TAGAACCAAACCAAGCACCC-ATTC s panTro5.chr2A 110008730 24 - 111504155 CAGAACCAAACCAAGCACCC-ATTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1429703 24 + 114371477 CAGAACCAAACCAAGCACCC-ATTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1457642 24 + 1464242 CAGAACCAAACCAAGTGCCC-ATTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1184102 24 + 81552678 TAGAACCAAACCAAGCACCC-ATTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 4516 25 + 10392 TAGAACCAAACCAAGCACCCAATTC i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 4657 25 - 11164 TAGAACCAAACCAAGCACCCAATTC i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1506930 25 + 3644372 TAGAACCAAACCAAGCACCCAATTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1462058 24 - 10304083 -AGAACCAAACCAAGCACCCAATTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1541000 25 - 107702431 TAGAACCAAACCAAGCACCCAATTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1033589 24 - 2200435 -AGAACCAAACCAAGCACCCAATTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1459494 25 - 13651311 TAGAACCAAACCAAGCACCCAATTC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1448116 19 - 108792865 ---AACCAAACCGAGCCCCC-GT-- i calJac3.chr14 C 0 I 1 s saiBol1.JH378218 1277631 21 - 7082604 ---AACCAAACTGAGCTCCC-GTTC i saiBol1.JH378218 C 0 I 7 s aotNan1.NW_018513311v1 191537 19 + 287728 -----CCAAACCGAGCTCCC-GTTC i aotNan1.NW_018513311v1 C 0 C 0 e cebCap1.NW_016107827v1 1371826 17 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1808040 1444 + 4416731 I a score=880899.000000 s hg38.chr2_KI270774v1_alt 198163 99 + 223625 CCCCAGCCGCTGCCTCTGTCTGGTACCTGAATGTGCTCTCTTAGCCCCAGAGCCTATCTTCAACCACACGTGATGATGTTTATCCAGGGCGACCCATGT s panTro5.chr2A 110008754 99 - 111504155 CCCCAGCCGCTGCCTCTGTCTGGTACCTGAATGTGCTCTCCTAGCCCCAGAGCCTTTCTTCAACCACACGTGATGATGTTTATCCAGGGCGACCCATGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1429727 99 + 114371477 CCCCAGCCGCTGCCTCTGTCTGGTACCTGAATGTGCTCTCCTAGCCCCAGAGCCTTTCTTCAACCACACGTGATGATGTTTATCCAGGGCGACCCATGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1457666 99 + 1464242 CCCCAGCCGCTGCCTCTGTCTGGTACCTGAATGTGCTCTCTCAGCCCCAGAGCCTTTCTTCAACCACACATGATGATGTTTATCCAGGGCGACCCATGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1184126 98 + 81552678 CCCCAGCCGCTGCCTCTGTC-GGTGCCTGCATGTGCTCTCTTAGCCCCAGAGCCTTTCTTCAGCCACACATGATGATGTTTATCCAGGGCGACCCATGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 4541 99 + 10392 CCCCAGCCACTGCCTTCGTCTGGTGCCTGAACGCGTTCCCTTAGCCCCAGAGCCTTTCTTCAACCACACGTGATGATATTTATCCAGGGCGACCCATGT i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 4682 99 - 11164 CCCCAGCCACTGCCTTCGTCTGGTGCCTGAACGCGTTCCCTTAGCCCCAGAGCCTTTCTTCAACCACACGTGATGATATTTATCCAGGGCGACCCATGT i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1506955 99 + 3644372 CCCCAGCCACTGCCTTCGTCTGGTGCCTGAACGCGTTCCCTTAGCCCCAGAGCCTTTTTTCAACCACACGTGATGATATTTATCCAGGGCGACCCATGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1462082 99 - 10304083 CCCCAGCCACTGCCTTCGTCTGGTGCCTGAACGTGCTCCCTTAGCCCCAGAGCCTTTCTTCAACCACAAGTGATGATATTTATCCAGGGCGACTCATGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1541025 99 - 107702431 CCCCAGCCACTGCCTTCGTGTGGTGCCTGAACACGCTCCCTTAGCCCCAGAGCCTTTCTTCAACCACACGTGATGATATATATCCAGGGCGACCCATGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1033613 99 - 2200435 CCCCAGCCACTGCCTTCGTCTGGTGCTTGAACGTGCTCCCTTAGCCCCAGAGCCTTTCTTCAACCACAAGTGATGATATTTATCCAGGGCGACTCATGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1459519 99 - 13651311 CCCCAGCCACTGCCTTCGTCTGGTGCCTGAACACACTCCCTTAGCCCCAGAGCCTTTCTTCAGCCACACGTGATGATATTTATCCAGGACGACCCATGT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1448136 95 - 108792865 CCCCAGCCACTGCCTCCGTCTGGCGCCCGAGCACGTTCCCTTAGA-CCAGAGCCTTTCCTCAGCCACGAGTGGTG---TTTATCCACAGCAGCCCATGT i calJac3.chr14 I 1 C 0 s saiBol1.JH378218 1277659 96 - 7082604 CCCCAGCCACTGCCTCCGTCTGGCACCAGGACGCGTTCCCTTGGATCCAGAGCCTTTCCTCGGCCACGAGTGATG---TTTATCCAGGGCGGCCCATGT i saiBol1.JH378218 I 7 C 0 s cebCap1.NW_016107827v1 1371843 96 + 1864846 CCCCAGCCACTGCCTCCGTCTGGCACCCGAACGCGTTCCTTTAGACCCAGAGCCTTTCCTCAACCACGAGTGATG---TTTATCCAGGACGGCCCATGT i cebCap1.NW_016107827v1 I 17 I 82 s aotNan1.NW_018513311v1 191556 93 + 287728 -CCCAGCCACTGCCT-CGTCTGGCACCCGAACGCGTTCCCTTGGACCCGGAGCCTTTCCTCAACCACGAGTGATG---TTTATCCAGGGCGG-CCACGT i aotNan1.NW_018513311v1 C 0 C 0 e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1808040 1444 + 4416731 I a score=358361.000000 s hg38.chr2_KI270774v1_alt 198262 53 + 223625 TTGTTTAAA-AAAA--------AAACGCTGATTGGTAGTATTTAAATTCTTATTTAAAAGTC s panTro5.chr2A 110008853 53 - 111504155 TTGTTTAAA-AAAA--------AAACGCTGATTGGTAGTATTTAAATTCTTATTTAAAAGTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1429826 52 + 114371477 TTGTTT-AA-AAAA--------AAACGCTGATTGGTAGTATTTAAATTCTTATTTAAAAGTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1457765 53 + 1464242 TTGTTTAAA-AAAA--------AAACACTGATTGGTAGTATTTAAATTCTTATTTAAAAGTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1184224 51 + 81552678 TTGTTT--A-AGAA--------AAACACTGATTGGTAGTATTTAAATTTTTATGTAAAAGTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 4640 52 + 10392 TTGTTT--TTAAAA--------AAACACTGATTGGTAGTATTTAAGTTCTTATTTAAAAGTC i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 4781 52 - 11164 TTGTTT--TTAAAA--------AAACACTGATTGGTAGTATTTAAGTTCTTATTTAAAAGTC i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1507054 52 + 3644372 TTGTTT--TAAAAA--------AAACACTGATTGGTAGTATTTAAGTTCTTATTTAAAAGTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1462181 51 - 10304083 TTGTTT--T-AAAA--------AAACACTGATTGGTAGTATTTAAGTTCTTATTTAAAAGTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1541124 51 - 107702431 TTGTTT--T-AAAA--------AAACACTGATTGGTAGTATTTAAATTCTTATTTAAAAGTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1033712 51 - 2200435 TTGTTT--T-AAAA--------AAACACTGATTGGTAGTATTTAAGTTCTTATTTAAAAGTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1459618 51 - 13651311 TTGTTT--T-AAAA--------AAACACTGATTGGTAGTATTTAAATTCTTATTTAAAAGTC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1448231 56 - 108792865 TTGTTT--T-AAAA--ACACACACACACTGATTGGTAGCATTTAATTTCTT-TTTAAAAGTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1277755 54 - 7082604 CTGTTT--T---AA--ACACACACACACTGATTGGTAGCATTTAATTTCTT-TTTAAAAGTG i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 191649 58 + 287728 TTGTTT--T-AAAAACACACACACACACTGATTGGTAGCATTTAATTTCTT-TTTAAAAGTA i aotNan1.NW_018513311v1 C 0 C 0 e cebCap1.NW_016107827v1 1371939 82 + 1864846 I e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1808040 1444 + 4416731 I a score=351631.000000 s hg38.chr2_KI270774v1_alt 198315 38 + 223625 AGTTTTCGTTTCATCTTGGATTTCTCCTCGGCCACCTC s panTro5.chr2A 110008906 38 - 111504155 AGTTTTCGTTTCATCTTGGATTTCTCCTCGGCCACCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1429878 38 + 114371477 AGTTTTCGTTTCATCTTGGATTTCTCCTCGGCCACCTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1457818 38 + 1464242 AGTTTTCGTTTCATCTTGGATTTCTCCTCGGCCACCTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1184275 38 + 81552678 AATTTTCGTTTCATCTTGGATTTCTCCTCGGCCACCGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 4692 38 + 10392 AGTTTTCATTTCATCTTGGGTTTCTCCTTGGCCACCTC i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 4833 38 - 11164 AGTTTTCATTTCATCTTGGGTTTCTCCTTGGCCACCTC i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1507106 38 + 3644372 AGTTTTCATTTCATCTTGGGTTTCTCCTTGGCCACCTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1462232 38 - 10304083 AGTTTTCATTTCATCTTGGGTTTCTCCTTGGCCACCTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1541175 38 - 107702431 AGTTTTCATTTCATCTTGGATTTCTCCTTGGCCACCTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1033763 38 - 2200435 AGTTTTCATTTCATCTTGGGTTTCTCCTTGGCCACCTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1459669 38 - 13651311 AGTTTTCATTTCATCTTGGATTTCTCCTCGGCCACCTC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1448287 38 - 108792865 GGTTTTCATTTCATCCTGGATTTCTCCCTGGTTGCCTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1277809 37 - 7082604 GGTTTTCATTTCACCCTGGATTTCTCCCC-GCTGCCTG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1372021 38 + 1864846 AGTTTTCATTTCATCCTGGATTTCTCGCCAGCTGCCTT i cebCap1.NW_016107827v1 I 82 C 0 s aotNan1.NW_018513311v1 191707 38 + 287728 GGTTTTCATTTCATCCTGGCTTTCTCCCCGGCTACCTT i aotNan1.NW_018513311v1 C 0 C 0 e otoGar3.GL873658 965825 540 + 5252280 I e dasNov3.JH576208 1808040 1444 + 4416731 I a score=2064430.000000 s hg38.chr2_KI270774v1_alt 198353 222 + 223625 GAATGGGTATCCAAACAG--------AAAAGTCGGT-AATAAAACTGTGGTCAAAGGAGCTC-TGAGTTCAGAGCCGCAGTGGCCCCAGGCTGGCAGCTCCTTGCAGAAAGCACAGAAGCCAAGGGCTGGAGCCCAGGAGCCGT----------TACTCAG--TCCCCGGCTTTTTCAGATGAAGACACAGGTCCAGGTGGGAGGCACTTCCTCAGGCCCC-TCAC----------CAGATGCTCTGGGGCCGGC-- s panTro5.chr2A 110008944 222 - 111504155 GAATGGGTATCCAAACAG--------AAAAGTTGGT-AATAAAACTGTGGTCAAAGGAGCTC-TGAGTTCAGAGCCGCAGTGGCCCCAGGCTGGCAGCTCCTCGCAGAAAGCACAGAAGCCAAGGGCTGGAGCCCAGGAGCCGT----------TACTCAG--TCCCCGGCTTTTTCAGATGAAGACACAGGTCCAGGTGGGAGGCACTTCCTCAGGCCCC-TCAC----------CAGATGCTCTGGGGCCGGC-- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1429916 222 + 114371477 GAATGGGTATCCAAACAG--------AAAAGTTGGT-AATAAAACTGTGGTCAAAGGAGCTC-TGAGTTCAGAGCCGCAGTGGCCCCAGGCTGGCAGCTCCTCGCAGAAAGCACAGAAGCCAAGGGCTGGAGCCCAGGAGCCGT----------TACTCAG--TCCCCGGCTTTTTCAGATGAAGACACAGGTCCAGGTGGGAGGCACTTCCTCAGGCCCC-TCAC----------CAGATGCTCTGGGGCCGGC-- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1457856 223 + 1464242 GAATGGGTATCCAAACAG--------AAAAGTCGGTAAATAAAACTGTGGTCAAAGGAGCTC-TGAGTTCAGAGCCACAGTGGCCCCAGGCTGGCAGCTCCTTGCAGAAAGCACAGAAGCCAAGGGCTGGAGCCCAGGAGCCGT----------TACTCAG--TCCCCGGCTTTTTCAGATGAAGACACAGGTCCAGGTGGGAGGCACTTCCTCAGGCCCC-TCAC----------CAGATGCTCTGGGGCCGGC-- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1184313 221 + 81552678 GAATGGGCACCTAAACAG--------AAAGGTCAGT-AATAAAACTGTGGTCAAAGGAGCTC-TGAGTTCAGGGCCGCAGTGGCCCCAGGCTGGCATCTCCTTGCAGAAAGCACAGAAGCCAAGGGCTGGAG-CCAGGAGCCCT----------TACTCTG--TCCCCAGCTGTTTCAGATGAAGACACAGGTCCAGGTGGGAGGCACTTCCTCAGGCCCC-TCAC----------CAGATGTCCTGGGGCCCGC-- i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 4730 221 + 10392 GAATGGGCACCTAAACAG--------AAAAGTCAGT-AATAAAACTGTGGTCAAAGGAGGTC-TGAGTTCAAAGCCGCACTGGCCCCAGGCTGGTATCTCCTTGCAGAGAGCATAGAAGCCAAGGGCCGGA-CCCAGGAGCCCT----------TACTCAG--TCCCTGGCTTTTTCAGATGAAGACACAGGTCCAGGTGGGAGGCACTTCCTCAGGCCCC-TCAC----------CAGATGCTCTGGGGCCGGC-- i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 4871 221 - 11164 GAATGGGCACCTAAACAG--------AAAAGTCAGT-AATAAAACTGTGGTCAAAGGAGGTC-TGAGTTCAAAGCCGCACTGGCCCCAGGCTGGTATCTCCTTGCAGAGAGCATAGAAGCCAAGGGCCGGA-CCCAGGAGCCCT----------TACTCAG--TCCCTGGCTTTTTCAGACGAAGACACAGGTCCAGGTGGGAGGCACTTCCTCAGGCCCC-TCAC----------CAGATGCTCTGGGGCCGGC-- i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1507144 221 + 3644372 GAATGGGCACCTAAACAG--------AAAAGTCAGT-AATAAAACTGTGGTCAAAGGAGGTC-TGAGTTCAAAGCCGCACTGGCCCCAGGCTGGTATCTCCTTGCAGAGAGCATAGAAGCCAAGGGCCGGA-CCCAGGAGCCCT----------TACTCAG--TCCCTGGCTTTTTCAGACGAAGACACAGGTCCAGGTGGGAGGCACTTCCTCAGGCCCC-TCAC----------CAGATGCTCTGGGGCCGGC-- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1462270 221 - 10304083 GAATGGGCACCTAAACAG--------AAAAGTCAGT-AATAAAACTGTGGTCAGAGGAGCTC-TGAGTTCAAAGCCGCACTGGCCCCAGGCTGGTATCTCCTTGCGGAGAGCATAGAAGCCAAGGGCCGGA-CCCAGGAGCCCT----------TACTCAG--TCCCTGGCTTTCTCAGACGAAGACACAGGTCCAGGTGGGAGGCACTTCCTCAGGCCCC-TCAC----------CAGATGCTCTGGGGCTGGC-- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1541213 221 - 107702431 GAATGGGCACCTAAACAG--------AAAAGTCAGT-AATAAAACTGTGGTCAAAGGAGCTC-TGAGTTCAAAGCCGCACTGGCCCCAGGCTGGCATCTCCTTGCGGAGAGCATAGAAGCCAAGGGCCGGA-CCCAGGAGCCCT----------TACTCAG--TCCCCGGCTTTTTCAGAGGAAGACACAGGTCCAGGTGGGAGGCACTTCCTCAGGCCTC-TCAC----------CAGATGCTCTGGGGCCGGC-- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1033801 221 - 2200435 GAATGGGCACTTAAACAG--------AAAAGTCAGT-AATAAAACTGTGGTCAGAGGAGCTC-TGAGTTCAAAGCCGCACTGGCCCCAGGCTGGTATCTCCTTGCGGAGAGCATAGAAGCCAAGGGCCAGA-CCCAGGAGCCCT----------TACTCAG--TCCCTGGCTTTGTCAGACGAAGACACAGGTCCAGGTGGGAGGCACTTCCTCAGGCCCC-TCAC----------CAGATGCTCTGGGGCTGGC-- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1459707 222 - 13651311 GAATGGGCACCTCAACAG--------AAAAGTCAGT-AATAAAACTGTGGTCAAAGGAGCTC-TGAGTTCAAAGCCGCACTGGCCCCAGGCTGGCATCTCCTTGCGGAGAGCATGGAAGCCAAGGGCCGGAGCCCAGGAGCCCT----------TACTCAG--TCCCCGGCTTTTTTGGACGAAGACACGGGTCCAGGTGGGAGGCACTTCCTCAGGCCCC-TCAC----------CAGATGCTCTGGGGCCGGC-- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1448325 219 - 108792865 GAATGGGCACCTAAACAG--------AAAAGCCAGT-AATAAAACGGTGGCCAAAAGAACTC-TGAGTTCAAAGTCACAGTGGCCCCAGGCTGACTTCTCCTCGCAGAAAGCGTAGGAACCACAGGTAGGAGCACAGGAGCCCT----------TGCTCAG--TCCC-AGCTTTTTCGGGTGAAGGCACAGGTCAGGGTGGGA-GCACTTCCTCAGGCCCC-TCAC----------CAGATGCTTC-GGGCTGGC-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1277846 217 - 7082604 GAATGGGCACCTAAACAG--------AAAAGTCAGT-AATAAAAC--TGGCCAAAGGAACTC-AGAGTTCAAAGCCACACTGGCCCCAGGCTGACTTCTCCTCGCAGAAAGCGTAGGAACCAAGGGCAGGAGCCCAGGAGCCCG----------TGCTCAG--TCCC-AGCTTTTTCCGGTGAAGGCACCGGTCCGGGTGGGA-ACGCTTCCTCAGGCCCC-TCAC----------CAGATGCTCT-GGGCTGGC-- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1372059 220 + 1864846 GAATAGGCACCTAAACAG--------AAAAGTCAGT-AATGAAACTGTGGCCAAAGGAACTCTTGAGCTCAAAGCCACACTGGCCCTGGGCTGACTTCTCCTCGCAGAAAGCACAGGAACCAAGGGCAGGAGCACAGGAGCCCG----------TGCTCTG--TCCC-AGCTTTTTTGGGTGAAGGCACAGGTCCGGGTGGGA-GCACTTCCTCAGGACCC-TCAC----------CAGATGCTCC-GGGCTGGC-- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 191745 217 + 287728 GAATGGGCACCTAAACAG--------AACAGTCATT-AATAAAACTGTGGCCGAAGGAACTC-TGAGTTCAAAGCCACACTGGACCCAGGCTGACGTCTCCTCGCAGAAAGCGTAGGAACCAAGGGCAGGAGCACAGGAGCT------------TGCTCAG--TCTC-AGCTTTTTCTGGTGAAGGCATAGGTCCGGGTGGGA-GGACTTCCTCAGGCCCC-TCAC----------CAGATGCTCC-GGGCTGGC-- i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1809484 243 + 4416731 GAATGGCCATCTAAATAAAAAAAGTTAAAAGTTAAT-TATAAAGTTGTGACCAGAAAGACTT-TGAATTCAAAGCCACATGAGTCCCAGATTGCCAT-TATTCACCTgaatcatagaaatctagagcttaa---agggagcagtaaaaatgatctattcagcctccctcCCCCCTCCTTACAATGGTGTGG--------GAGAGGGCCTTTCGAAGGTCACATTACCAAGAAACTGCAGATCTTAGGGTTCCAGAAT i dasNov3.JH576208 I 1444 C 0 e otoGar3.GL873658 965825 540 + 5252280 I a score=212394.000000 s hg38.chr2_KI270774v1_alt 198575 30 + 223625 TCCTGG-------GCTGCCTCTCTCCTC--------TGTCCCA--------------------------------------------------------------------------TC s panTro5.chr2A 110009166 30 - 111504155 TCCTGG-------GCTGCCTCTCTCCTC--------TGTCCCG--------------------------------------------------------------------------TC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1430138 30 + 114371477 TCCTGG-------GCTGCCTCTCTCCTC--------TGTCCCG--------------------------------------------------------------------------TC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1458079 30 + 1464242 TCCTGG-------GCTGCCTCTCTCCTC--------TGTCCCA--------------------------------------------------------------------------TC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1184534 30 + 81552678 TCCTGG-------GCTGCCTCTCTCCTC--------TGTCCCG--------------------------------------------------------------------------TC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 4951 30 + 10392 TCCCGG-------GCTGCCTCTCTCCTC--------TGTCCCG--------------------------------------------------------------------------TC i rheMac8.chrUn_NW_015009285v1 C 0 I 4 s macFas5.chrUn_KE146933 5092 30 - 11164 TCCCGG-------GCTGCCTCTCTCCTC--------TGTCCCG--------------------------------------------------------------------------TC i macFas5.chrUn_KE146933 C 0 I 4 s macNem1.NW_012011978v1 1507365 30 + 3644372 TCCCGG-------GCTGCCTCTCTCCTC--------TGTCCCG--------------------------------------------------------------------------TC i macNem1.NW_012011978v1 C 0 I 4 s cerAty1.NW_012000820v1 1462491 30 - 10304083 TCCCGG-------GCTGCCTCTCTCCTC--------TGTCCTG--------------------------------------------------------------------------TC i cerAty1.NW_012000820v1 C 0 I 4 s chlSab2.chr14 1541434 30 - 107702431 TCCCGG-------GCTGCCTCTCTCCTC--------TGTGCCG--------------------------------------------------------------------------TC i chlSab2.chr14 C 0 I 46 s manLeu1.NW_012103754v1 1034022 30 - 2200435 TCCCAG-------GCTGCCTCTCTCCTC--------TGTCCTG--------------------------------------------------------------------------TC i manLeu1.NW_012103754v1 C 0 I 4 s colAng1.NW_012118821v1 1459929 30 - 13651311 TCCCGG-------GCTGCCTCTCTCCTC--------TGTCCCG--------------------------------------------------------------------------TC i colAng1.NW_012118821v1 C 0 I 4 s calJac3.chr14 1448544 111 - 108792865 TCCTGGCTGcctccctccctccctcctc--------cgtcccttcaggcccctggctgcctccctccctccctcctccatcccttcaggcccctggctgcctccctccctccTCCCGTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1278063 33 - 7082604 TCCTGGCTG----CCTCCCTCCCTCCTC--------TGTCCCT--------------------------------------------------------------------------TT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1372279 33 + 1864846 TCCTGGCTG----CCTCCCTCCCTCCTC--------TGTCCCA--------------------------------------------------------------------------TT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 191962 26 + 287728 TCCTGGCTG----CCTCCCTCCCTCCCC-----------------------------------------------------------------------------------------TT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 966365 38 + 5252280 TCCTGG-------GCTAGGTCTCCACCCCAGGCACCTCTCCCC--------------------------------------------------------------------------TC i otoGar3.GL873658 I 540 C 0 s dasNov3.JH576208 1809727 30 + 4416731 CCTAGA-------GCAGCCCCTTTCCTC--------TGCCTGA--------------------------------------------------------------------------CA i dasNov3.JH576208 C 0 C 0 a score=27920.000000 s hg38.chr2_KI270774v1_alt 198605 4 + 223625 AGGC--- s panTro5.chr2A 110009196 4 - 111504155 GGGC--- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1430168 4 + 114371477 GGGC--- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1458109 4 + 1464242 GGGC--- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1184564 4 + 81552678 AGGC--- i nomLeu3.chr19 C 0 I 3 s rheMac8.chrUn_NW_015009285v1 4985 4 + 10392 GGGC--- i rheMac8.chrUn_NW_015009285v1 I 4 I 3 s macFas5.chrUn_KE146933 5126 4 - 11164 GGGC--- i macFas5.chrUn_KE146933 I 4 I 3 s macNem1.NW_012011978v1 1507399 4 + 3644372 GGGC--- i macNem1.NW_012011978v1 I 4 I 3 s cerAty1.NW_012000820v1 1462525 4 - 10304083 GGGC--- i cerAty1.NW_012000820v1 I 4 I 3 s manLeu1.NW_012103754v1 1034056 4 - 2200435 GGGC--- i manLeu1.NW_012103754v1 I 4 I 3 s colAng1.NW_012118821v1 1459963 4 - 13651311 GGGC--- i colAng1.NW_012118821v1 I 4 I 3 s calJac3.chr14 1448655 4 - 108792865 GGGC--- i calJac3.chr14 C 0 I 3 s saiBol1.JH378218 1278096 4 - 7082604 GGGC--- i saiBol1.JH378218 C 0 I 3 s cebCap1.NW_016107827v1 1372312 4 + 1864846 GGGC--- i cebCap1.NW_016107827v1 C 0 I 3 s aotNan1.NW_018513311v1 191988 4 + 287728 TGGC--- i aotNan1.NW_018513311v1 C 0 I 3 s otoGar3.GL873658 966403 4 + 5252280 TGTC--- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1809757 4 + 4416731 ---CTGA i dasNov3.JH576208 C 0 C 0 e chlSab2.chr14 1541464 46 - 107702431 I a score=1931983.000000 s hg38.chr2_KI270774v1_alt 198609 206 + 223625 -----CTGCACTTCTCTGTCTGATTCCCACCAACCTTGTTCGGTTTCTTTCTGGAATTGGCTGATGA-GACC--CAGGATG-AGCTCCAAAATCTGCTGCCATCCCGTGCCCCCGTC-CCCCCAG----G----GCTCCAGCT-CTG-CAAGGTG-CTGTCCACCTTCCTTCAACCACGGTTTCACCTCCAGGAGGCTTCTGGGAAAGATAAAATGCAGCCAAGGGC s panTro5.chr2A 110009200 206 - 111504155 -----CTGCACTTCTCTGTCTGATTCCCACCAACCTTGTTCGGTTTCTTTCTGGAATGGGCTGATGA-GACC--CAGGATG-AGCTCCAAAATCTGCTGCCATCCCTTACCCCCGTC-CCCCCAG----G----GCTCCAGCT-CTG-CAAGGTG-CTGTCCACCTTCCTTCAACCAAGGTTTCACCTCCAGGAGGCTTCTGGGAAAGATAAAATGCAGCCAAGGGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1430172 206 + 114371477 -----CTGCACTTCTCTGTCTGATTCCCACCAACCTTGTTCGGTTTCTTTCTGGAATGGGCTGATGA-GACC--CAGGATG-AGCTCCAAAATCTGCTGCCATCCCTTGCCCCCGTC-CCCCCAG----G----GCTCCAGCT-CTG-CAAGGTG-CTGTCCACCTTCCTTCAACCAAGGTTTCACCTCCAGGAGGCTTCTGGGAAAGATAAAATGCAGCCAAGGGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1458113 206 + 1464242 -----CTGCACTTCTCTGTCTGATTCCCACCAACCTTGTTTGGTTTCTTTCTGGAATGGGCTGATGA-GACC--CAGGATG-AGCTCCAAAATCTGCTGCCATCCCCTGCCCCCATC-CCCCCAG----G----ACTCCAGCT-CTG-CAAGGTG-CTGTCTACCTTCCTTCAACCACGGTTTCACCTCCAGGAGGCTTCTGGGAAAGACAAAATGCAGCCAAGGGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1184571 206 + 81552678 -----CTGCACTTCTCTGTCTGATTCCCACCAACCTTGTTCAGTTTCTTTCTGGAATGGGCTGATGA-GACC--CAGGACG-AGCTCCAAAATCTGCTGCCATCCCGTGCCCCCGTC-CCCCTAG----G----GCTCCAGCT-CTT-CAAGGTG-CTGGACACCTTCCTTCAACCACGGTTTCACCTCCAGGAGGCTTCTGGGAAAAATAAAATGCAGCCAAGGTC i nomLeu3.chr19 I 3 C 0 s rheMac8.chrUn_NW_015009285v1 4992 206 + 10392 -----CTGCACTTCTCTGTCTGATTCACGCTGACCCTGTTCGGTTTATTTCTGGAATGGGCTGATGA-AACC--CAGCATG-AGCTCCAAAATCTGCTGCCATCCCGTGCCCCTGTG-CCCCCAG----G----GCTCCAGCT-CTG-CAAGGTG-CAGACCACCTTCCCTCGACCACAGTTTCACCTCTAGGAGGCGTCTGGGAAAAATAAAATGCAGCCAAGGGC i rheMac8.chrUn_NW_015009285v1 I 3 C 0 s macFas5.chrUn_KE146933 5133 206 - 11164 -----CTGCACTTCTCTGTCTGATTCACGCTGACCCTGTTCGGTTTATTTCTGGAATGGGCTGATGA-AACC--CAGCATG-AGCTCCAAAATCTGCTGCCATCCCGTGCCCCTGTG-CCCCCAG----G----GCTCCAGCT-CTG-CAAGGTG-CAGACCACCTTCCCTCGACCACAGTTTCACCTCTAGGAGGCGTCTGGGAAAAATAAAATGCAGCCAAGGGC i macFas5.chrUn_KE146933 I 3 C 0 s macNem1.NW_012011978v1 1507406 206 + 3644372 -----CTGCACTTCTCTGTCTGATTCACGCTGACCCTGTTCGGTTTATTTCTGGAATGGGCTGATGA-AACC--CAGCATG-AGCTCCAAAATCTGCTGCCATCCCGTGCCCCTGTG-CCCCCAG----G----GCTCCAGCT-CTG-CAAGGTG-CAGACCACCTTCCCTCGACCACAGTTTCACCTCTAGGAGGCGTCTGGGAAAAATAAAATGCAGCCAAGGGC i macNem1.NW_012011978v1 I 3 C 0 s cerAty1.NW_012000820v1 1462532 206 - 10304083 -----CTGCACTTCTCTGTCCGATTCACACTGACCCTGTTCAGTTGATTTCTGGAATGGGCTGATGA-AACC--CAGCATG-AGCTCCAAAATCTGCTGCCATCCCGTGCCCCTGTC-CCCCCAG----G----GCTCCAGCT-CTG-CAAGGTG-CAGACCACCTTCCCTCGACCACAGTTTCACCTCTAGGAGGTGTCTGGGAAAAATAAAATGCAGCCAAGGGC i cerAty1.NW_012000820v1 I 3 C 0 s chlSab2.chr14 1541510 206 - 107702431 -----CTGCACTTCTCTGTCTGATTCACGCTGACCCTGTTCAGTTTATTTCTGGAATGGGCTGATGA-AACC--CAGCATG-AGCTCCAAAATCTGCTGCCATCCCGTGCCCCTGTC-CCCCCAG----G----GCTCCAGCT-CTG-CAAGGTG-CAGACCACCTTCCCTCGACCACAGTTTCACCTCCAGGAGGCATCTGGGAAAAATAAAATGCAGCCAAGGGC i chlSab2.chr14 I 46 C 0 s manLeu1.NW_012103754v1 1034063 206 - 2200435 -----CTGCACTTCTCTGTCCGATTCACACTGACCCTGTTCAGTTGATTTCTGGAATGGGCTGATGA-AACC--CAGCATG-AGCTCCAAAATCTGCTGCCATCCCGTGCCCCTGTC-CCCCCAG----G----GCTCCAGCT-CTG-CAAGGTG-CAGACCACCTTCCCTCGACCACAGTTTCACCTCTAGGAGGTGTCTGGGAAAAATAAAATGCAGCCAAGGGC i manLeu1.NW_012103754v1 I 3 C 0 s colAng1.NW_012118821v1 1459970 206 - 13651311 -----CTGCGCTTTTCTGTCCGATTCACGCTGACCCTGTTCAGTTTATTTCTGGAATGTGCTGATGA-AACC--TAGGATG-AGCTCCAAAATCTGCTGCCATCCCGTGCCCCTGTC-CCCCCAG----G----GCTCCGGCT-CTG-CGAGGTG-CACATCACCTTCCCTTAGCCACAGTTTCACCTCCAGGAGGCTTCTGGGAAAAATAAAATGCAGCCAAGGGC i colAng1.NW_012118821v1 I 3 C 0 s calJac3.chr14 1448662 205 - 108792865 -----CTGTGCTTCCCTGTTCAATTCTCGCCAACCCTGTTCAGTTTCTTCCTGGAACAGGCCTATGA-GACT--CAGGCTG-AGCTCCGAAATCTGCTGCCATCCCGTGCCCCCGT--ACCCCAG----G----GCTGCAGCT-CTG-CAAGGTG-CAGACCACCTCCCCTTGACCATGGTTTCACCTCCAGGAGGACCCTGGGGAAAATAAAATGCAACCACGGGC i calJac3.chr14 I 3 I 118 s saiBol1.JH378218 1278103 204 - 7082604 -----CTGTGCTTCCCTGTTCACTTCTCACTAACCCTGTTCAGTTCCTTCCTGGAACAGGCCGATGA-GACC--CAGGCTG-GGCTCCGAAATCTGCTGCCATCCC-CGCCCCCGT--CCCCCAG----G----GCACCAGCT-CTA-CAAGGTG-CAGACCACCTCCCTTCAACCACAGTTTCACCTCCAGGATGCCCCTGGGGAAAATAAAATGTAACAACAGGG i saiBol1.JH378218 I 3 C 0 s cebCap1.NW_016107827v1 1372319 204 + 1864846 -----CTGTGCTTCCCTGTTCAATTCTCTCCAACCCTGTTCAGTTCCTTCCTGGAACAGGCTGATGA-GACC--CAGGCCG-AGCTCCGAAATCTGCTGCCATCCC-TGACCCCGT--CCCCCAG----G----GCTGCAGCT-CTG-CAAGGTG-CAGACCACCTCCCCTCAACCACGGTTTCACCTCCAGGAGGCCCCTGCGGAAAATAAAATGCAACCACAGGG i cebCap1.NW_016107827v1 I 3 C 0 s aotNan1.NW_018513311v1 191995 204 + 287728 -----CTGTGCTTCCCTGTTCAATTCTCGCCAACCCTGTTCAGTTCCTTCCTGGAACAGGCCTATGA-GACC--CAGGCTG-AGCTCCAAAATCTGCTGCCATCCCTTGTCCCCGT--CCCCCAG----G----GACCCAGTT-CTG-CAAGCTG-CAGA-CACCTCCCCTTGACCACAGTTTCACCTCCGGGAGGCCCCTGAGGAAAATAAAATGCAACCACGGGG i aotNan1.NW_018513311v1 I 3 C 0 s otoGar3.GL873658 966407 153 + 5252280 -----CAGAACTT-TCTGTCTGATTCCC-CCATCCATTCTTAACTTCATTCTGAAATGGGATAATGA-TAACTGCACCTGC-AGATCCAAAATCTGTGGCTGTCCTGTGCCCCAG----CTCAAGGACAG----GCTCCCATT-ATGCCAGGGTT-CAGGCAGCCCGCCAAC------------------------------------------------------- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1809761 214 + 4416731 TCCAACTGCTCCTCATT------TTCCTGTCAACTCTGCTTAATTTCTTTCTCTAATGGGCCAGTAACAACT--TAGCCTGTAGCTCCAAAAGCTGCTGGCCTATTATCTCTGCGGCTTCCCCAT----GGGATGCTCTAACTACTG-CAAGGAGTCAGGCTGTGCCTCCTCAACTAATGTTTAACTTTCAGACTGCTTCAGCGGCAAGCAAAACGCAACCAACGAG i dasNov3.JH576208 C 0 C 0 a score=111098.000000 s hg38.chr2_KI270774v1_alt 198815 12 + 223625 AAAACCTCACAG s panTro5.chr2A 110009406 12 - 111504155 AAAACCTCACAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1430378 12 + 114371477 AAAACCTCACAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1458319 12 + 1464242 AAAACCTCACAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1184777 12 + 81552678 AAAACCTCACAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 5198 12 + 10392 AAAACCTCATGG i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 5339 12 - 11164 AAAACCTCATGG i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1507612 12 + 3644372 AAAACCTCATGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1462738 12 - 10304083 AAAACCTCATGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1541716 12 - 107702431 AAAACCTCATGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1034269 12 - 2200435 AAAACCTCATGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1460176 12 - 13651311 AAAACCTCATGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1448985 12 - 108792865 GAAACCTCACAG i calJac3.chr14 I 118 C 0 s saiBol1.JH378218 1278307 12 - 7082604 GAGACCTCATAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1372523 12 + 1864846 GAAACCTCACAG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 192199 12 + 287728 GAGACCTCACAG i aotNan1.NW_018513311v1 C 0 I 104 s otoGar3.GL873658 966560 12 + 5252280 CCCACCATGTAG i otoGar3.GL873658 C 0 I 1 s dasNov3.JH576208 1809975 12 + 4416731 ACCATATCAGAG i dasNov3.JH576208 C 0 C 0 a score=-2054.000000 s hg38.chr2_KI270774v1_alt 198827 2 + 223625 -CG s panTro5.chr2A 110009418 2 - 111504155 -CG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1430390 2 + 114371477 -CG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1458331 2 + 1464242 -CG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1184789 2 + 81552678 -CA i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 5210 2 + 10392 -TG i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 5351 2 - 11164 -TG i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1507624 2 + 3644372 -TG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1462750 2 - 10304083 -TG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1541728 2 - 107702431 -TG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1034281 2 - 2200435 -TG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1460188 2 - 13651311 -TG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1448997 2 - 108792865 -CA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1278319 2 - 7082604 -CG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1372535 2 + 1864846 -CG i cebCap1.NW_016107827v1 C 0 I 983 s otoGar3.GL873658 966573 1 + 5252280 -C- i otoGar3.GL873658 I 1 C 0 s dasNov3.JH576208 1809987 2 + 4416731 CC- i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 192211 104 + 287728 I a score=74858.000000 s hg38.chr2_KI270774v1_alt 198829 11 + 223625 TTATACCGCGT s panTro5.chr2A 110009420 11 - 111504155 TTACACCGCAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1430392 11 + 114371477 TTACACCGCAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1458333 11 + 1464242 TTACACTGCGT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1184791 11 + 81552678 TTACACCGCAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 5212 11 + 10392 TTACACCACAT i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 5353 11 - 11164 TTACACCACAT i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1507626 11 + 3644372 TTACACCACAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1462752 11 - 10304083 TTACACCACAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1541730 11 - 107702431 TTACACCACAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1034283 11 - 2200435 TTACACCACAT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1460190 11 - 13651311 TTACACCACAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1448999 11 - 108792865 CTACCCCTTGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1278321 11 - 7082604 CTGCCCCTCAC i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 966574 11 + 5252280 TTCCCCTGCAT i otoGar3.GL873658 C 0 I 4 s dasNov3.JH576208 1809989 11 + 4416731 TTACAACACAT i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 192211 104 + 287728 I e cebCap1.NW_016107827v1 1372537 983 + 1864846 I a score=323921.000000 s hg38.chr2_KI270774v1_alt 198840 47 + 223625 --------------CCC-----TTACAGCCCACCTTGCG-AACCTTTCCCGCCCCGGTCCGAGGCCT s panTro5.chr2A 110009431 47 - 111504155 --------------CCC-----TTACAGCCCACCTTGCG-AACCTTTCCCGCCCCGGTCCGAGGCCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1430403 47 + 114371477 --------------CCC-----TTACAGCCCACCTTGCG-AACCTTTCCCGCCCCGGTCCGAGGCCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1458344 47 + 1464242 --------------CCC-----TTACAGCCCACCTTGCA-AACCTTTCCTGCCCCGGTCCGAGGCCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1184802 47 + 81552678 --------------CCC-----TTACAGCCCACCTTGCG-AACCTTTCCTGCCCCGGTCTGAGGCCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 5223 47 + 10392 --------------CCC-----CTACAGACCACTTTGTC-CTACTTTCCTGCCCCGGTCAAAGGCCC i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 5364 47 - 11164 --------------CCC-----CTACAGACCACTTTGTC-CTACTTTCCTGCCCCGGTCAAAGGCCC i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1507637 47 + 3644372 --------------CCC-----CTACAGACCACTTTGTC-CTACTTTCCTGCCCCGGTCAAAGGCCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1462763 47 - 10304083 --------------CCC-----CTACAGACCACTTTGTC-CCACTTTCCTGCCCCGGTCAAAGACCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1541741 47 - 107702431 --------------CCC-----CTACAGACCACTTTGTC-CCACTTTCCCGCCCTGGTCAAAGGCCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1034294 47 - 2200435 --------------CCC-----CTACAGACCACTTTGTC-CCACTTTCCTGCCCCGGTCAAAGACCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1460201 47 - 13651311 --------------CCC-----TTACAAACCACTTTGTC-CCACTTGCCTGCCCCGGTCAAAGGCCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1449010 46 - 108792865 --------------CCC-----TTACGGCACACCTTGTG-CCACTTTCCCACCCC-ATCCGGGGTCC i calJac3.chr14 C 0 I 1 s saiBol1.JH378218 1278332 46 - 7082604 --------------CCC-----TCACGGCCCACCTTGTG-CCACTCTCCCACCCT-GTCCGAGGTCC i saiBol1.JH378218 C 0 I 1 s aotNan1.NW_018513311v1 192315 46 + 287728 --------------CCC-----TTACAGCCCACCTTGTG-CCACTTTCCCACCCC-ATCCGGGGTCC i aotNan1.NW_018513311v1 I 104 I 1 s otoGar3.GL873658 966589 48 + 5252280 --------------CCA-----TCACAGTCCATTCTGTGCCCACTTTCCCAGCTCTTTCCAAGGCCT i otoGar3.GL873658 I 4 C 0 s dasNov3.JH576208 1810000 65 + 4416731 CCTACTAACCGTTTCCCACTAGCCACCGCCCACTCGGCCTCCACCGTTCTTCCC--ATCTAATGCTT i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1372537 983 + 1864846 I a score=1117090.000000 s hg38.chr2_KI270774v1_alt 198887 119 + 223625 -C-CAGGGCTCCCTGGGTCC------TGTGG----TCCACTCCGAGGGCACTGAGAGCCCTCCCTGGTTTGGGCAGCAAGGTGTGCTTT--------------------------------------------CTGTCCTGCAGG---AC-GCGTCCATGCCGAACCCA-CAGTGAGGTT---- s panTro5.chr2A 110009478 120 - 111504155 -C-CAGGGCTCCCTGGGTCC------TGTGG----TCCACTCCGAGGGCACTGAGAGCCCTCCCTGGTTTGGGCAGCAAGGTGTGCTTT--------------------------------------------CTGTCCTGCAGG---ACAGCGTCCATGCCGAACCCA-CAGTGAGGTT---- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1430450 120 + 114371477 -C-CAGGGCTCCCTGGGTCC------TGTGG----TCCACTCCGAGGGCACTGAGAGCCCTCCCTGGTTTGGGCAGCAAGGTGTGCTTT--------------------------------------------CTGTCCTGCAGG---ACAGCGTCCATGCCGAACCCA-CAGTGAGGTT---- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1458391 120 + 1464242 -C-CAGGGCTCCCTGGGTCC------TGTGG----TCCACTCCGAGGGCACTGAGAGCCCTCCCTGGTTTGGGCAGCAAGGTGTGCTTT--------------------------------------------CTGTCCTGCAGG---ACAGCGTCCATGCCGAACCCA-CAGTGAGGTT---- i gorGor5.CYUI01015607v1 C 0 I 1 s nomLeu3.chr19 1184849 120 + 81552678 -C-CAGGGCTCCCTGGGTCC------TGTGG----TCCACTCCAAGGGCACTGAGAGCCCTCCCTGGTTTGGGCAGCAAGGTGTGCTTT--------------------------------------------CTGTCCTGCAGG---ACAGCATCCATGCCGAGCCCA-CAGTGAGGTT---- i nomLeu3.chr19 C 0 I 1 s rheMac8.chrUn_NW_015009285v1 5270 121 + 10392 -CACAGGGCTCCCTGGGTCC------TGCGG----TCCACTCAGAGGGCACTGAGAGTCCTCCCTGGTTTGGGCAGCGAGGTGTACTTT--------------------------------------------CTGTCCTGCAGG---ACAGCGTCCATGCCAAGCCCA-CAGTGAGGCT---- i rheMac8.chrUn_NW_015009285v1 C 0 I 1 s macFas5.chrUn_KE146933 5411 121 - 11164 -CACAGGGCTCCCTGGGTCC------TGCGG----TCCACTCAGAGGGCACTGAGAGTCCTCCCTGGTTTGGGCAGCGAGGTGTACTTT--------------------------------------------CTGTCCTGCAGG---ACAGCGTCCATGCCAAGCCCA-CAGTGAGGCT---- i macFas5.chrUn_KE146933 C 0 I 1 s macNem1.NW_012011978v1 1507684 121 + 3644372 -CACAGGGTTCCTTGGGTCC------TGCGG----TCCACTCAGAAGGCACTGAGAGTCCTCCCTGGTTTGGGCAGCGAGGTGTACTTT--------------------------------------------CTGTCCTGCAGG---ACAGCGTCCATGCCAAGCCCA-CAGTGAGGCT---- i macNem1.NW_012011978v1 C 0 I 1 s cerAty1.NW_012000820v1 1462810 121 - 10304083 -CACAGGGCTCCCTGGGTCC------TGCGG----TCCACTCAGAGGGCACTGAGAGTCCTCCCTGGTTTGGGCAGCGAGGTGTGCTTT--------------------------------------------CTGTCCTGCAGG---ACAGCGTCCATGCCAAGCCCA-CAGTGAGGCT---- i cerAty1.NW_012000820v1 C 0 I 1 s chlSab2.chr14 1541788 119 - 107702431 -CACAGGGCTCCCTGGGTCC------TGCAG----TCCACTCAGAGGGCACTGAGAGTCCTCCCTGGTTTGGGCAGCAAGGTGTGCTTT--------------------------------------------CTGTCCTGCAAG---ACAGCGTCCATGCCAAGCCCA-CA--GAGGCT---- i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012103754v1 1034341 121 - 2200435 -CACAGGGCTCCCTGGGTCC------TGCGG----TCCACTCAGAGGGCACTGAGAGTCCTCCCTGGTTTGGGCAGTGAGGTGTGCTTT--------------------------------------------CTGTCCTGCAGG---ACAGCGTCCATGCCAAGCCCA-CAGTGAGGCT---- i manLeu1.NW_012103754v1 C 0 I 1 s colAng1.NW_012118821v1 1460248 121 - 13651311 -CACAGGGCTCCCTGGGTCC------TGTGG----TCCACTCAGAGGCCACTGAGAGTCCTCCCTGGTTTGGGCAGCAAGGTGTGCTTT--------------------------------------------CTGTCCTGCTGG---ACAGTGTCCATGCCAAGCCCA-CAGTGAGGCT---- i colAng1.NW_012118821v1 C 0 I 1 s calJac3.chr14 1449057 120 - 108792865 --CCAGGGCTGCCTGGGTCT------CATGG----CCCACTCAGAGGATACTGAGAGCCCTCCCTGGTTCAGGCAGCAAGGGATGCGTT--------------------------------------------CCGGTC-GCAGG---ACGGCGTCCATGCCAAGCCCAGCAGTGAGGCT---- i calJac3.chr14 I 1 I 1 s saiBol1.JH378218 1278379 121 - 7082604 --CCAGGGCTGCCTGGGTCT------CGTGG----CCCACTCAGGGGGCACTGAGGGCCCTCCCTGGGTCAGGCAGCAAGGGATGCTTT--------------------------------------------CTGTCCTGCAGG---GCAGTGTCCACTCCAAGCCCAGCAGTGAGGCT---- i saiBol1.JH378218 I 1 I 1 s cebCap1.NW_016107827v1 1373520 121 + 1864846 --CCAGGGCTGCCTGGGTTT------TGTGG----CCCACTCAGAGGGCACTGAGAGCCCTCTCTGTTTCAGGCAGCAAGGGATGCTTT--------------------------------------------CTGTCCTGCAGG---ACGGCATCCACGCCAAGCCCAGCAGTGAGGCT---- i cebCap1.NW_016107827v1 I 983 I 14 s aotNan1.NW_018513311v1 192362 121 + 287728 --CCAGGGCTGCCTGGGTCT------CGTGG----CCCACTCAGAGGGTACTGAGAGCCTTCCCTGGTTCAGGCAGCAAGGGAAGCTTT--------------------------------------------CTGTCCTGCAGG---ACGGCGTCCACGCCGAGCCCAGCAGTAAGGCT---- i aotNan1.NW_018513311v1 I 1 I 1 s otoGar3.GL873658 966637 121 + 5252280 --CTTGGGGTCCCCAGGGTC------AGTGGCAGCCTCACTCAGAGGGTACTAAAAG--CTTCCTGGTCTGGGCAGAAAGGGACAGTCC--------------------------------------------CCATCCTGTGGG---TCAGCTTCAACGCTGATGAC--TGGGAAGGCT---- i otoGar3.GL873658 C 0 I 4 s dasNov3.JH576208 1810065 178 + 4416731 TCTGACGGTTTCCAGGATCTCTTCAATGGGG----CTGGCTTGAAAGGTAGTCATTTGACTTACTGGTTTGGGCAGAAAAGAGATTTTTCCTCTCAGACACAGTAGGTGAAGTGTGCTCAGGTTTCGAGATGGCTGTGCTGCTTGCTAATGATGATCAAATGCAGCCTA--AGCGAGACTTGTC i dasNov3.JH576208 C 0 C 0 a score=65543.000000 s hg38.chr2_KI270774v1_alt 199006 12 + 223625 CCAT--AGAGAGAG s panTro5.chr2A 110009598 12 - 111504155 CCAT--AGAGAGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1430570 12 + 114371477 CCAT--AGAGAGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1458512 14 + 1464242 CCATAGAGAGAGAG i gorGor5.CYUI01015607v1 I 1 C 0 s nomLeu3.chr19 1184970 14 + 81552678 CCATAGAGAGAGAG i nomLeu3.chr19 I 1 C 0 s rheMac8.chrUn_NW_015009285v1 5392 14 + 10392 CCATAGAGAGCGAG i rheMac8.chrUn_NW_015009285v1 I 1 C 0 s macFas5.chrUn_KE146933 5533 14 - 11164 CCATAGAGAGCGAG i macFas5.chrUn_KE146933 I 1 C 0 s macNem1.NW_012011978v1 1507806 14 + 3644372 CCATAGAGAGCGAG i macNem1.NW_012011978v1 I 1 C 0 s cerAty1.NW_012000820v1 1462932 14 - 10304083 CCATAGAGAGCGAG i cerAty1.NW_012000820v1 I 1 C 0 s chlSab2.chr14 1541908 14 - 107702431 CCATAGAGAGAGAG i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012103754v1 1034463 14 - 2200435 CCATAGAGAGCGAG i manLeu1.NW_012103754v1 I 1 C 0 s colAng1.NW_012118821v1 1460370 14 - 13651311 CCATAGAGAGAGAG i colAng1.NW_012118821v1 I 1 C 0 s calJac3.chr14 1449178 12 - 108792865 --CTGGAGAGTGGG i calJac3.chr14 I 1 I 2 s saiBol1.JH378218 1278501 12 - 7082604 --CCGGAGAGTGGG i saiBol1.JH378218 I 1 I 2 s aotNan1.NW_018513311v1 192484 12 + 287728 --CTGGAGAGTGGG i aotNan1.NW_018513311v1 I 1 I 2 s otoGar3.GL873658 966762 8 + 5252280 GCATGCAG------ i otoGar3.GL873658 I 4 C 0 s dasNov3.JH576208 1810243 12 + 4416731 ACCTGGAAAGGG-- i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1373641 14 + 1864846 I a score=7426307.000000 s hg38.chr2_KI270774v1_alt 199018 761 + 223625 C----TAACTT------------CTCTGCCCTGTGTCCCCTGCTGGCTCTCCCCACACACGTCACATTCGGATCTGGACTTAGTGGTCTAAATGGC--TTTTCTGGGCA-----GATAAATGT-----------CCCTCCCTCCC------------TGCGTCATGCTGTGGGGTGAAGGCCACTGG-----CCCAGGACAGGGTATGGCCCAGACTCAGGCAG------GACAACCTGGCTTGCC-CAGGCCCTGGAAGGT--TCTTCTAACCA--GGCCTCTTTCTGTGCCCCAGACTCCGGGAGGCTCCCTCGGGTGACTTGGATCTCCATGTCGCTGGCTGCTCTGCTGATCGGAGGCTTCGCAGGTCTCACCTCGACGGTGATTTGCAGGTGGTAAGTCCTTCACTTTTTGACTGTTA-CTTAGACACAAAGCAATCTCCTTTCCTCTGGACATGGCT-G-CAATGAAGCTGCTTTATTTTCCCGAAGCTAACACAGGTTACTGGTATCTCAAAGGCATTGATCT-CAGAGCTATTTTGTACAACGTAATAGACTCTCCGGATC-TTTCATTATGCTTTAAATAATGAAAGTGGAGTGATCATTTGTACACCTTAGGTGGTGTCAGGTATCTGTGGACGAACATTCAGCAATATGGAACACTTTTCTAACACTAAATGATTGCATTGAAGTAGTCTCTTGTTAGGAGTA--AAGATTCTTACAAAGGTTTCTCAGAGAAA-AA-----AGGTCATCCATGAATAAAAA-GTTTTATTCTTCAGTTTTATTCCCTC---------CCTTGAGGG---------CAGAAATTGGAAGTTGAACTTTCATGTT s panTro5.chr2A 110009610 761 - 111504155 C----TAACTT------------CTCTGCCCTGTGTCCCCTGCTGGCTCTCCCCACACACGTCACATTCGGGTCCGGACTTAGTGGTCTAAATGGC--TTTTCTGGGCA-----GATAAATGT-----------CCCTCCCTCCC------------TGCGTCATGCTGTGGGGTGAAGGCCACTGG-----CCCAGGACAGGGTATGGCCCAGACTCAGGCAG------GACAACCTGGCTGGCC-CAGGCCCTGGAAGGT--TCTTCTAACCA--GGCCTCTTTCTGTGCCCCAGACTCCGGGAGGCTCCCTCGGGCGACTTGGATCTCCATCTCGCTGGCTGCTCTGCTGATCGGAGGCTTCGCAGGTCTCACCTCGACGGTGATTTGCAGGTGGTAAGTCCTTCACTTTTTGACTGTTA-CTTAGACACAAAGCAATCTCCTTTCCTCTGGACATGGCT-G-CAATGAAGCTGCTTTATTTTCCTGAAGCTAACACAGGTTACTGGTATCTCAAAGGCATTGATCT-CAGAGCTATTTTGTACAACGTAATAGACTCTCCGGATC-TTTCATTATGCTTTAAATAATGAAAGTGGAGCGATCATTTGTACACCTTAGGTGGTGTCAGGTATCTGTGGACGAACATTCAGCAATATGGAACACTTTTCTAACGTTAAATGATTGCATTGAAGTCGTCTCTTGTTAGGAGTA--AAGATTCTTACAAAAGTTTCTCAGAGAAA-AA-----AGGTCATCCATGAATAAAAA-GTTTTATTCTTCAGTTTTATTCCCTC---------CCTTGAGGG---------CAGAAATTGGAAGTTGAACTTTCATGTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1430582 761 + 114371477 C----TAACTT------------CTCTGCCCTGTGTCCCCTGCTGGCTCTCCCCACACACGTCACATTCGGGTCCGGACTTAGTGGTCTAAATGGC--TTTTCTGGGCA-----GATAAATGT-----------CCCTCCCTCCC------------TGCGTCATGCTGTGGGGTGAAGGCCACTGG-----CCCAGGACAGGGTATGGCCCAGACTCAGGCAG------GACAACCTGGCTGGCC-CAGGCCCTGGAAGGT--TCTTCTAACCA--GGCCTCTTTCTGTGCCCCAGACTCCGGGAGGCTCCCTCGGGCGACTTGGATCTCCATCTCGCTGGCTGCTCTGCTGATCGGAGGCTTCGCAGGTCTCACCTCGACGGTGATTTGCAGGTGGTAAGTCCTTCACTTTTTGACTGTTA-CTTAGACACAAAGCAATCTCCTTTCCTCTGGACATGGCT-G-CAATGAAGCTGCTTTATTTTCCTGAAGCTAACACAGGTTACTGGTATCTCAAAGGCATTGATCT-CAGAGCTATTTTGTACAACGTAATAGACTCTCCGGATC-TTTCATTATGCTTTAAATAATGAAAGTGGAGCGATCATTTGTACACCTTAGGTGGTGTCAGGTATCTGTGGACGAACATTCAGCAATATGGAACACTTTTCTAACGTTAAATGATTGCATTGAAGTCGTCTCTTGTTAGGAGTA--AAGATATTTACAAAAGTTTCTCAGAGAAA-AA-----AGGTCATCCATGAATAAAAA-GTTTTATTCTTCAGTTTTATTCCCTC---------CCTTGAGGG---------CAGAAATTGGAAGTTGAACTTTCATGTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1458526 760 + 1464242 C----TAACTT------------CTCTGCCCTGTGTCCCCTGCTGGCTCTCCCCACACACGTCACATTCGGGTCTGCACTTAGTGGTCTAAATGGC--TTTTCTGGGCA-----GATAAACGT-----------CCCTCCCTCCC------------TGCGTCATGCTGTGGGGTGAAGGCCGCTGG-----CCCAGGACAGGAT-TGGCCCAGACTCAGGCAG------GACAACCTGGCTTGCC-CAGGCCCTGGAAGGT--TCTTCTAACCA--GGCCTCTTTCTGTGCCCCAGACTCCGGGAGGCTCCCTCGGGCGACTTGGGTCTCCATCTTGCTGGCTGCTCTGCTGATCGGAGGCTTCGCAGGTCTCACCTCGACGGTGATTTGCAGGTGGTAAGTCCTTCACTTTTTGACTGTTA-CTTAGACACAAAGCAATCTCCTTTCCTCTGGACATGGCT-G-CAATGAAGCTGCTTTATTTTCCCGAAGCTAACACAGATTACTGGTATCTCAAAGGCATTGATCT-CAGAGTTA-TTTGTACAACGTAATAGACTCTCCGGATC-TTTCATTACGCTTTAAATAATGAAAGTGGAGTGATGATTTGTACACCTTACGTGGTGTCAGGTATCTGTGGACGAACATTCAGCAATATGGAACACTTTTCTAACATTAAATGATTGCATTGAAGTAGTCTCTTGTTAGGAGTAATAAGATTCTTACAAAGGTTTCTCAGAGAAA-AA-----AGGTCATCCATGAATAAAAA-GTTTTATTCTTCAGTTTTATTCCCT----------CCTTGAGGG---------CAGAAATTGGAAGTTGAACTTTCATGTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1184984 759 + 81552678 C----CAACTT------------CTCTGCCCTCTGTCCCCTGCTGGCTCTCCCCACATAGATCACATTCAGGTCTGGACTTAATGGTCTAAATAGC--TTTTCTGGGCA-----GATAAATGT-----------CCCTCCCTCCC------------TGCGTCATGCTGTGGGGTGAAGGCCGCTGG-----CCCAGGACAGGGTGTGCTCCAGACTCAGGCAG------GACAACCTGGCTTGCC-CAGGCCCCGGAAGGT--TCTTCTAACCA--GGCCTCTTTCTGTGCCCCAGACTCCGGGAGGCTCCCTCGGGCGACTTGGGTCTCCATCTCGCTGGCTGCTCTGCTGATCGGAGGCCTGGCAGGTCTCACCTCGACGGTGATTTGCAGGTGGTAAGTCCTTCACTTTTTGAC--TTA-CTTAGACACAAAGCAATCTCCTTTCCTCTGGACATGGCT-G-CAATGAAGCTGCTTTATTTTCCTGAAGCTAACACAGATTACTGGTATCTCAAAGGCATTGATCT-CAGAGCTATTTTGTACAACGTAGTAGACTCCCTGGATC-TTTCATTTTGCTTTAAATAATGAATGTGGACTGATCATTCGTACATCTTAGGTGGTGTCAGATATCTGTGGACGAAGATTCAGCAACATGGAACACTTTTCTAACGTTAAATGATTGCATTGAAGTAGCCTTTTGTTAAGAGTA--AAGATTCTTACAAAGGTTTCTCAGAGAAA-AA-----AGGTCATCCATGAATAAAAA-GTTTTATTCTTCAGTTTTATTCCCTC---------CCTTGAGGG---------CAGAAATTGGAAGTAGAACTTTCATGTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 5406 771 + 10392 C----CAGCTT------------CTCTGCCCTGTGTCCCCTGCTGGCTCTCCCCAC----GTCCCATTCGGCTCTGGACTTAACGGTCT--ATGGC--TTTTCTGGGCA-----GATAAATGAccct-------ccctccctccctccctccttcTGTACATCGTGCTGTGGGGTGAAGGCAGCTGG-----CCCAGGACAGGGTGTGGCCCAGACTCAGGCAG------GACAACGTGGCTTGCC-CAGGCCCTGGAAGGT--TCTTCTAACCA--GGCCTCTTTCTGTGTCCCAGACTCCGGGAGGCTCCCTCGGGCGACTTGGGTCTCCATCTCACTGGCTGCTCTGCTGATTGGAGGCTTGGCAGGTCTCACCTCGACGGTGATTTGCAGGTGGTAAGTCCTTCATTTTTTGACTGTTA-CTTAGACACAACACAATCTCCTTTCCTCTGGACATGGTT-G-CAGTGAAGCTGCTTTATTTTCCTAAAGCTAACATAGGTTACTGGTATCTCAAAGGCATTGATCT-CAGAGCTATTTTGTACAACGTCTTAGACTCTCCGGATC-ATTCTTTATGCTTTAAATAATGAAAGTGGAGTGATCATTTGTACACCTTAGGTGGTGTCAGGTATCTGTGGATGAAGATTCAGCAATATGGAATACTTTTCTAACATTAAGTGATTGCATTGAAGTAGTCTCTTGTTAGGAGTA--AAGATTCTTCTAAAGGTTTCTCAGAGAAA-AA-----AGGTCATCCATGAATGAAAA-GTTTTATTCCTCAGTTTTATTTCCTC---------CCTTGAGGG---------CAGAAATTGAAAGTTGAACTTTCATGGT i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 5547 771 - 11164 C----CAGCTT------------CTCTGCCTTGTGTCCCCTGCTGGCTCTCCCCAC----GTCCCATTCGGCTCTGGACTTAACGGTCT--ATGGC--TTTTCTGGGCA-----GATAAATGAccct-------ccctccctccctccctccttcTGTACATCGTGCTGTGGGGTGAAGGCAGCTGG-----CCCAGGACAGGGTGTGGCCCAGACTCAGGCAG------GACAACGTGGCTTGCC-CAGGCCCTGGAAGGT--TCTTCTAACCA--GGCCTCTTTCTGTGCCCCAGACTCCGGGAGGCTCCCTCGGGCGACTTGGGTCTCCATCTCACTGGCTGCTCTGCTGATTGGAGGCTTGGCAGGTCTCACCTCGACGGTGATTTGCAGGTGGTAAGTCCTTCATTTTTTGACTGTTA-CTTAGACACAACACAATCTCCTTTCCTCTGGACATGGTT-G-CAGTGAAGCTGCTTTATTTTCCTACAGCTAACATAGGTTACTGGTATCTCAAAGGCATTGATCT-CAGAGCTATTTTGTACAACGTCTTAGACTCTCCGGATC-ATTCTTTATGCTTTAAATAATGAAAGTGGAGTGATCATTTGTACACCTTAGGTGGTGTCAGGTATCTGTGGATGAAGATTCAGCAATATGGAATACTTTTCTAACATTAAGTGATTGCATTGAAGTAGTCTCTTGTTAGGAGTA--AAGATTCTTCTAAAGGTTTCTCAGAGAAA-AA-----AGGTCATCCATGAATGAAAA-GTTCTATTCCTCAGTTTTATTTCCTC---------CCTTGAGGG---------CAGAAATTGAAAGTTGAACTTTCATGGT i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1507820 771 + 3644372 C----CAGCTT------------CTCTGCCCTGTGTCCCCTGCTGGCTCTCCCCAC----GTCCCATTCGGCTCTGGACTTAACGGTCT--ATGGC--TTTTCTGGGCA-----GATAAATGAccct-------ccctccctccctccctccTTTTGTACATCGTGCTGTGGGGTGAAGGCAGCTGG-----CCCAGGACAGGGTGTGGCCCAGACTCAGGCAG------GACAACGTGGCTTGCC-CAGGCCCTGGAAGGT--TCTTCTAACCA--GGCCTCTTTCTGTGCCCCAGACTCCGGGAGGCTCCCTCGGGCGACTTGGGTCTCCATCTCACTGGCTGCTCTGCTGATTGGAGGCTTGGCAGGTCTCACCTCGACGGTGATTTGCAGGTGGTAAGTCCTTCATTTTTTGACTGTTA-CTTAGACACAACACAATCTCCTTTCCTCTGGACATGGTT-G-CAGTGAAGCTGCTTTATTTTCCTAAAGCTAACATAGGTTACTGGTATCTCAAAGGCATTGATCT-CAGAGCTATTTTGTACAATGTCTTAGACTCTCCGGATC-ATTCTTTATGCTTTAAATAATGAAAGTGGAGTGATCATTTGTACACCTTAGGTGGTGTCAGGTATCTGTGGATGAAGATTCAGCAATATGGAATACTTTTCTAACATTAAGTGATTGCATTGAAGTAGTCTCTTGTTAGGAGTA--AAGATTCTTCTAAAGGTTTCTCAGAGAAA-AA-----AGGTCATCCATGAATGAAAA-GTTTTATTCCTCAGTTTTATTTCCTC---------CCTTGAGGG---------CAGAAATTGAAAGTTGAACTTTCATGGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1462946 767 - 10304083 C----CAGCTT------------CTCTGCCCTGTGTCCCCTGCTGGCTCTCCCCAC----GTCACATTCGGGTCTGGACTTAACAGTCT--ATGGC--TTTTCTGGGCA-----GATAAATGA-----------ccctccctccctccctccttcTGTACATCGTGCTGTGGGGTGAAGGCAGCTGG-----CCCAGGACAGGGTGTGGCCCAGACTCAGGCAG------GACAATGTGGCTTGCC-CAGGCCCTGGAAGGT--TCTTCTAACCA--GGCCTCTTTCTGTGCCCCAGACTCTGGGAGGCTCCCTCGGGCGACTTGGGTCTCCATGTCACTGGCTGCTCTGCTGATTGGAGGCTTGGCCGGTCTCATCTCGACGGTGATTTGCAGGTGGTAAGTCCTTCATTTTTTGACTGTTA-CTTAGACACAACACAATCTCCTTTCCTCTGGACATGGTT-G-CAGTGAAGCTGCTTTATTTTCCCAAAGCTAACATAGATTACTGGTATCTCAAAGGCATTGATCT-CAGAGCGATTTTGTGCAATGTCTTAGACTCTCCGGATC-ATTCTTTATGCTTTAAATAATGAAAGTGGAGTGATCGTTTGTACACCTTAGGTGGTGTCAGGTATCTGTGGACGAAGATTCAGCAATATGGAATACATTTCTAACATTAAGTGATTGCATTGAAGTCGTCTCTTGTTAGGAGTA--AAGATTCTTCTAAAGGTTTCTCAGAGAAA-AA-----AGGTCATCCATGAATGAAAA-GTTTTATTCCTCAGTTTTATTTCCTC---------CCTTGAGGG---------CAGAAATTGAAAGTTGAACTTTCATGGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1541922 777 - 107702431 CC--ACAGCTT------------CTCTGCCCTGTGTCCCCTGCTGGCTCTCCCCAC----GTCACATTCGGCTCTGGACTTAACGGTCT--ATGGC--TTTTCTGGGCA-----GATGAATGAccctccctcctccctccctccctccctccctcTGTACATCGTGCTGTGGGGTGAAGGCAACTGG-----CCCAGGACAGGGTGTGGCCCAGACTCAGGCAG------GATAACCTGGCTTGCC-CAGGCCCTGGGAGGT--TCTTCTAACCA--GGC--CTTTCTGTGCCCCAGACCCCGGGAGGCTCCCTCGGGCGACTTGGGTCTCCATCTCGCTGGCTGCTCTGCTGATTGGAGGCTTGGCAGGTCTCACCTCGACGGTGATTTGCAGGTGGTAAGTCCTTCATTTATTGACTGTTA-CTGAGACACAACACAATCTCCTTTCCTCTGGACATGGTT-G-CAGTGAAGCTGCTTTATTTTCCTAAAGCTAACATAGGTTACTGGTATCTCAAAGGCATTGATCT-CAGAACTATTTTGTGCAATGTCTTAGACTCTCCGGATC-ATTCTTTATGCTTTAAATAATGAAAGTGGAGCGATCATTTGTACACCTTAGGTGGTGTCAGGTATCTGTGGACGAAGATCCAGCAATATGGCATACTTTTCTAACATTAAGTGATTGCATTGAAGTAGTCTCTTGTTAGGAGTA--AAAATTCTTATAAAGGTTTCTCAGAGAAA-AA-----AGGTCATGCATGAATGAAAA--TTTTATTCCTCAGTTTTATTTCCTC---------CCTTGAGGG---------CAGAAATTGAAAGTTGAACTTTCATGTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1034477 767 - 2200435 C----CAGCTT------------CTCTGCCCTGTGTCCCCTGCTGGCTCTCCCCAC----GTCACATTCGGGTCTGGACTTAACGGTCT--ATGGC--TTTTCTGGGCA-----GATAAATGA-----------ccctccctccctccctccttcTGTACATCGTGCTGTGGGGTGAAGGCAGCTGG-----CCCAGGACAGGGTGTGGCCCAGACTCAGGCAG------GACAACGTGGCTTGCC-CAGGCCCTGGAAGGT--TCTTCTAACCA--GGCCTCTTTCTGTGCCCCAGACTCCGGGAGGCTCCCTCGGGCGACTTGGGTCTCCATGTCACTGGCTGCTCTGCTGATTGGAGGCTTGGCAGGTCTCACCTCGACGGTGATTTGCAGGTGGTAAGTCCTTCACTTTTTGACTGTTA-CTCAGACACAACACAATCTCCTTTCCTCTGGACATGGTT-G-CAGTGAAGCTGCTTTATTTTCCCAAAGCTAACATAGATTACTGGTATCTCAAAGGCATTGATCT-CAGAGCGATTTTGTGCAATGTCTTAGACTCTCCGGGTC-ATTCTTTATGCTTTAAGTAATGAAAGTGGAGTGATCATTTGTACACCTTAGGTGGTGTCAGGTATCTGTGGACGAAGATTCAGCAATATGGAATACATTTCTAACATTAAGTGATTGCATTGAAGTCGTCTCTTGTTAGGAGTA--AAGATTCTTCTAAAGGTTTCTCAGAGAAA-AA-----AGGTCATCCATGAATGAAAA-GTTTTATTCCTCAGTTTTATTTCCTC---------CCTTGAGGG---------CAGAAATTGAAAGCTGAACTTTCATGGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1460384 766 - 13651311 C----CAGCTT------------CTCTGCCCTGTGTCCCCTGCTGGCTCTCCCCAC----GTCACATTCAGGTCTGGACTTCATGGTCT--ATGGC--TTTTTTGGGCA-----GATAAATGA-----------ccctccccccctccctccctcTGTACATCGTGCTGTGGGGTGAAGGCAGCTGG-----CCCAGGACAGGGTGTGGCCCAGACTCAGGCAG------GACAACCTGGCTGGCC-CAGGCCCTGGAAGCT--TCTTCTAACCA--GGCCTCTTTCTGTGCCCCAGACTCCGGGAGGCTCCCTCGGGCGACTTGGGTCTCCATCTCGCTGGCTGCTCTGCTGATGGGAGGCTTGGCAGGTCTCACCTCAACGGTGATTTGCAGGTGGTAAGTCCTTCATTTTTTAGCTGTTA-CTTAGACATGACACAATCTCCTTTCCTGTGGACATGGTT-G-CAGTGAAGCTGCTGTA-TTTCCTAAAGCTAACATAGATTACTGGTATCTCAAAGGCATCGATCT-CAGAGCTATTTTGTACAACGTCTTAGACTCTCCGGATC-ATTCTTTATGCTTTTAATAATGAAAGTGGAGTGATCATTCGTACGCCTTAGGTGGTGTCAGGTATCTGCGGACGCAGATTCAGCAATATGGAATACTTTTCCAACATTAAGTGATTGCATTGAAGTAGTCTCTTGTTAGGAGTA--AAGATTCTTAGAAAGGTTTCTCAGAGAAG-AA-----AGGTCATCCGTGAATGAAAA-GTTTTATTCTTCAGTTTTATTTCCTC---------CCTTGAGGG---------CAGAAATTGAAAGTTGAACTTTCATGTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1449192 706 - 108792865 C----CAACTT------------CTCTGCCCTGTGTCCTCTGCTGGCTCTCCCAACACTTGTCACATTTGGGTCTAC--------------ACGGC--TTTTCTGGGCT-----GATAAATGA-----------CCCTCCC-----------------------TGCTGTGGGGTGAAGGCAGCCGG-----CCCAGGACAGGGTGCGG-CCCGGCTCAGGCAG------GACATCCTGGCTTGCC-CAGGCCATGGAAGCT--GCTTCTAACCA--GGCATCTTTCTGTGCCCCAGACTCCAGGAGCCTCCCACGGGCGTCTTGGGTCTCCATCTCGCTGGCTGCTCTGCTTATTGGAGGCTTGGCAGGTCTCACCTGGACAGTGATTTGCAGGTGGTAAGTCCTTCATTTTCTAACCGTTA-CTTAGATGCAAAGCAATTTCCTTTCCTCTGGTCATGGCT-G-TAATGAAGCTGCTTTATTTTCCTGAAGCTGACACAGGCTACTGGTATCTCAAAGGCATTGATCT-CAGAGCTGTTTTGCACAGCTGCTTAGACTCTCTGGATC-TTTCATTATGCTTTAAATAATGAAAGTGGAGTGATCAGTCGTACACCTCAGGCGGAGGCAGGTATCTGTGG-TGAAGATTCCGTGATATGACATACACTTCTAACATGAAATGACTGCACGGAAATAGT-CCTTGTTAGCAGTA--AAGACTCTTA-AAAGGTTTCTCAGAGAAAGAA-----AGG----------------------------TCAGTTTTAAAGCCTC---------CCTTGAGGG---------CAGAAAGGGAAAGCTTAATTTTCATGTT i calJac3.chr14 I 2 C 0 s saiBol1.JH378218 1278515 726 - 7082604 C----CGACTT------------CTCTGCCCTGTGTCCTCTGCTGGTTCTCCCAACACACGTCACATTTGGGTCTAC--------------ATGGC--TTTTCTGGGCTGTGGGGTCAAATGA-----------CCCTCCC-----------------------TGCTGTGGGGTGAAGGCCGCTAG-----CCCAGGACAGGGTGCGGCCCCGGCTCAGGCAG------GACATCCGGGCTTGCC-CGGGCCCTGGAAGCT--GCTTCTAACCT--GGCATCTTTCTGTGCCCCAGACTCCAGGAACCTCCCACGGGCGTCTTGGGTCTCCATCTCGCTGGCTGCTTTGCTGATCGGAGGCGTGGCAGGTCTCACCTGGACGGTGATTTGCAGGTGGTAAGTCCTTCATTTTCTAACTGTTA-CTT-----------------CTTTGCTCTGGTCATGGCT-G-TAATGAAGCTGCTTTATTTTCCCGAAGCTAACACAGGCTGCTGGTATCTCAGAGGCATTGATCT-CAGAGCTGTTTTGTACAACTGGTTAGGTTCCTGGGATTATTCCATCATGCTTTAAATAATGAAAGTGGAGTGATCAGTCGTACACCATAGGTGGTGTCAGGTATCCGTGGATGAAGATTCAGCAATAGGGCATACACTTCTAACATTAAATGATTGTACTGAAACAGTGTCTTGTTAGGAGTA--AAGATTCTTACAGAGGTTTCTCAGAGAAAGAA-----ACGTCAGCCATGGATAAAAA-CCTTTATTCTTCAGTTTTATTCCCTC---------CCGTGAGGG---------CAGAAATGGAAAGTTGAATTTTCAAGTT i saiBol1.JH378218 I 2 I 325 s cebCap1.NW_016107827v1 1373655 713 + 1864846 C----CAACCT------------CTCTGCCCT-TGTCCTCTGCTGGCTCTCCCAACACACGTCACATTTGGGTCCAC--------------ATGGC--TTTTCTGGGCT-----GATAAATGA-----------CCCTCCC-----------------------TGCTGTGGGGTGAAGGCAGCTGG-----CCCAGGACAGGGTATGGCCCTGGCTCAGGCAG------GACATCCGGGCTTGCC-CGGGCCCTGGAAGCT--TCTTCTAACCG--GGCATCTTTCTGTGCCCCAGACTCCAGGAGCCTCCCATGGGCGTCTTGGGTCTCCATCTCGCTGGCTGTTCTGCTGATCGGAGGCTTGGCAGGTCTCACCTGGACAGTGATTTGCAGGTGGTAAGTCCTTCAATTTCT----GTTA-CTTGGATGCAAAGCAATTTCCTTTCCTCTGGTCATGGCT-G-TAAT-------------------GAAGCTAACACAGGCTAATGGTATCTCAAAGACATTGATCT-CGGAGCTGTTTTGTAAAACTGATTAGATTCCCTGGATC-TTCCATTATGCTTTAAATAATGAAAGTGGAGTGATCAGTCGTACACCTTAGGTGGTGCCAGGTATCTGTGGATGAAGATTCAGCAATAGGACACACACTTCCAACATTAAATGATTGCACTGAAATAGTCTCTTGTTAGGAGTA--AAGATTCTTACAAAGGTTTCTCAGAGAAAAAA-----AGGTCCTCCATGGATAAAAA-CTTTTATTCTTCAGTTTTATCCCCTC---------CCTTGAGGG---------CAGATATGGAAAGTTGAATTTTCACATT i cebCap1.NW_016107827v1 I 14 C 0 s aotNan1.NW_018513311v1 192498 737 + 287728 C----CACCCT------------CTCTGCCCTGTGTCCTCTGCTGGCTCTCCCAACACACGTCACATTTGGGTCTAC--------------ATGGC--TTTTCTGGGCT-----GATAAATGA-----------CCCTCCC-----------------------TGCTGTGGGGTGAAGGCAGCTGG-----CCCAGGACAGGGTGTGGCCCCGGCTCAGGCAG------GACATCCTGACTTGCC-CAGACCCTGGAAGCT--TTTTCTAACTG--GGCGTCTTTCTGTGCCCCAGACTCCAGGAGCCTCCCACGGGCGTCTTGGGTCTCCATCTCGCTGGCTGCTCTGCTGATCGGAGGCTTGGCAGGTCTCACCTGGACGGTGATTTGCAGGTGGTAAGTCCTTCATTTTCTGACTGTTA-CTTAGATGCAAAGCAATTTCCTTTCCTCTGGTCGTGGCT-G-TAATTAAGCTGCTTTATGTCCCCGAAACTCACACAGGCTACTGGTATCTCAAAGGCATTGATCT-CAGAGCTGTTTGGTATAACGTGTTAGACTCTCTGGATC-TTTCATTGTGCTTTAAATAATGAAAGTGGAGGGATGAGTCGTACACCTTAGGTGGTGTCAGGTATCTGTGGGTGAAGATTCAGCAATGTGACATACAATTCTGACATTAAATGATTGCACTGAAATAGTCTCTCGTTAGGAGTA--AAGATTCTTACAAAGGTTTCTCAGAGAAAGAA-----AGGTCACCCATGGATAAAAA-CGTTTATTCTTCAGTTTTATCCCCTC---------CCTTGAGGG---------CAGAAATGGAAACTTGAATTTTCACGTT i aotNan1.NW_018513311v1 I 2 C 0 s otoGar3.GL873658 966770 571 + 5252280 C----CTGCCA------------CGTTGCCCCGTGTCCCCTG------------------------------------------------------------------A-----AAC-----------------TCTTCCCGCCT-----------------------------TGCAGTCCAGTGG-----CCCAAGACAGGGTGTGGCTCCGAGTCAGG------------------------------CCCTGGCAGGC--TCCGCTAACCT--GGTCTCCTTCTGTACCCTAGACTCTGGGAGGCTACCGCAGGCATCTTGGGTCTCCATTGCTCTGGGCGCCCTGCTGGTCGGTGGCTCGGCAGGTCTCACCTGGACAGTGATTTGCAGGTGGTAAGTGCCATGTTCTTCAGCTGT----------------------------CTTTGGGCACGGCTGG-CAGTGAAGCTGCCTTGTTTTCCCGAGGCTAGTACAGGTTATCGGTACCTCAAAGGCATTGGTCT-AGGAGTGATTTTGTGCAGGGCGTTAGAAGTTCTGATCC-TTTCATTATGTTTT-AATAGTGAGACTGGA-----------------------------AGGTAACT---------CACACAGCACGGTGG-------------CATCAGATGGCTGCGCTGAAAAGTGCTGGGGTTGGAAGCA--GAGACTCCTA-AAGGGTTTCTCAGGGAAA-AA-----AGGTCA-CCGTGGATAGAAT-GTTTTATTCTTCAATCATATCCCCTC---------CCTCAAGGG---------CAGGGATTGCAAGTTGAGCTTTTAAGAT i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1810255 788 + 4416731 -CAAACATCTTTCAAGAGTAAAACTCATCCCTCTGGTCTCCGCATGCACTCCCTACCCACCTCACATTTAGAGCTGAACAGACCTGTTTACACGGCTGTTTCCCCGTTA-----CATAGAAGC-----------TCCTCGG----------------TGCCTGGCACCGTGGCGTGAGAGAGGATGGCCATCCCCTCGTGAGGGTACGGGCGGAGGTCAGGCGGCGCTGCCACCGCCGAGCCGCCCACAGGCCCCGAGACCTGCTCCTCTAACCACCGCCCTCCTTCTGTGCTCCAGATTCTGGAAGGCTCGCGAAGGCGTCCTTAGTCTCCATCGCCCTGGGCGCCGCGCTCGTGGGCGGCCTGGCGGCGCTGACCTGGACGGTGATTTGCAGGTGGTAAGTCCCACATTCTCCTGTTGTTACCTTGGTCAGGAGGCAATTTTCTCTCCTTCGGGCAAGGCC-GTTAATGAAGCTTCTTTATTTCTCTGAAGACAGTATAGATTATAGGTTCCAGGGACTCATTTATCTCCAGAGCCGTTTTGTACAAC----------TTCTAGTTC-TTTC------------GTAATGAGAATGGAGTGATCGTTAGCCC-CCTTAGCTTGCCTCAGAGCTCGGGAGGCGGAGACTCAGCGACACCCAGTGCTTTGGGAATACTAAATGGTTTTACTGAAATGGTCTCTTGTTAGGCGTA--ACAACGTCT----AGGTTTCTCAGAGGAA-AAAAAGTAAGTCACCTGTGGATAAAAAAGTTTGATTCTGCAGTCGGATCCTGTCCCCGCCCCGCCTCCAGAGCGAACGACCCGGAAGTGAAAAGCTGAACTTC--TGGT i dasNov3.JH576208 C 0 C 0 a score=172664.000000 s hg38.chr2_KI270774v1_alt 199779 14 + 223625 AAAAATGGCGCTGC s panTro5.chr2A 110010371 14 - 111504155 AAAAATGGCGCTGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1431343 14 + 114371477 AAAAATGGCGCTGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1459286 14 + 1464242 AAAAATGGCGCTGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1185743 14 + 81552678 AAAAATGGCGCTGC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 6177 14 + 10392 AAAAATGGCGTTGC i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 6318 14 - 11164 AAAAATGGCGCTGC i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1508591 14 + 3644372 AAAAATGGCGCTGC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1463713 14 - 10304083 AAAAATGGCGCTGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1542699 14 - 107702431 AAAAATGGCGCTGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1035244 14 - 2200435 AAAAATGGCGCTGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1461150 14 - 13651311 AAAAATGGCGCTGC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1449898 14 - 108792865 AAAAATGGTGCTGC i calJac3.chr14 C 0 I 309 s saiBol1.JH378218 1279566 14 - 7082604 aaaaaTGGCGCTGT i saiBol1.JH378218 I 325 C 0 s cebCap1.NW_016107827v1 1374368 14 + 1864846 AAAAATGGTGCTGC i cebCap1.NW_016107827v1 C 0 I 309 s aotNan1.NW_018513311v1 193235 14 + 287728 AAAAATAGTGCTGC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 967341 14 + 5252280 AAAAACGGCACAGA i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1811043 14 + 4416731 AAATATGGCACTAC i dasNov3.JH576208 C 0 C 0 a score=22948.000000 s hg38.chr2_KI270774v1_alt 199793 2 + 223625 TG s panTro5.chr2A 110010385 2 - 111504155 TG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1431357 2 + 114371477 TG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1459300 2 + 1464242 TA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1185757 2 + 81552678 TG i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 6191 2 + 10392 TG i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 6332 2 - 11164 TG i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1508605 2 + 3644372 TG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1463727 2 - 10304083 TG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1542713 2 - 107702431 TG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1035258 2 - 2200435 TG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1461164 2 - 13651311 TG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1450221 2 - 108792865 TG i calJac3.chr14 I 309 C 0 s saiBol1.JH378218 1279580 2 - 7082604 TG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1374691 2 + 1864846 TG i cebCap1.NW_016107827v1 I 309 C 0 s aotNan1.NW_018513311v1 193249 2 + 287728 Tg i aotNan1.NW_018513311v1 C 0 I 510 s otoGar3.GL873658 967355 2 + 5252280 TG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1811057 2 + 4416731 CA i dasNov3.JH576208 C 0 C 0 a score=400944.000000 s hg38.chr2_KI270774v1_alt 199795 53 + 223625 TTGAAAG-ACTCAGA-CCCGCACCTGAGAGG----------CCCTGCCCTGTGAGAGTGCTCTCT s panTro5.chr2A 110010387 53 - 111504155 TTGAAAG-ACTCAGA-CCCGCACCTGAGAGG----------CCCTGCCCTGTGAGAGTGCTCTCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1431359 53 + 114371477 TTGAAAG-ACTCAGA-CCCGCACCTGAGAGG----------CCCTGCCCTGTGAGAGTGCTCTCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1459302 53 + 1464242 TTGAAAG-ACTCAGA-CCCGCACCTGAGAGG----------CCCTGCCCTGTGAGAGTGCTCTCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1185759 53 + 81552678 TTGAAAG-ACTCAGC-CCCATACCTGAGAGG----------CCCTGCCCTGTGAGACTGCTCTCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 6193 63 + 10392 TTGAAAG-ACTCAGA-CCCGAACCTGAGAGAACCTGAGAGTTCCTGCCCTGTGAGAGTGCTGTCT i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 6334 63 - 11164 TTGAAAG-ACTCAGA-CCCGAACCTGAGAGAACCTGAGAGTTCCTGCCCTGTGAGAGTGCTGTCT i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1508607 63 + 3644372 TTGAAAG-ACTCAGA-CCCGAACCTGAGAGAACCTGAGAGTTCCTGCCCTGTGAGAGTGCTGTCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1463729 63 - 10304083 TTGAAAG-ACTCAGA-CCCGAACCTGAGAGAACCTGAGAGTTCCTGCCCTGTGAGAGTGCTGTCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1542715 63 - 107702431 TTGAAAG-ACTCAGA-CCCGAACCTGAGAGAACCTGAGAGTTCCCGCCCTGTGAGAGTGCTGTCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1035260 63 - 2200435 TTGAAAG-ACTCAGA-CCCGAACCTGAGAGAACCTGAGAGTTCCTGCCCTGTGAGAGTGCTGTCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1461166 63 - 13651311 TTGAAAG-ACTCAGG-CCCGAACCTGAGAGAACCCGAGAGTTCCTGCCCTGTGAGAGCGCTGTCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1450223 52 - 108792865 TTGAAAG-ACTAAGA-CGGGAACCTGAGCAG----------TCCTGTCTC-TGAGGGTGCTCTCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1279582 50 - 7082604 TTGAAAG-ACTAAGA-CTGGAACCTGAGAGG----------TCCTGTCTC---AGGGTGCTCTCT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1374693 52 + 1864846 TTGAAAG-ATTAAGA-CCGGAACCCGAGAGG----------TCCTGTCTC-TGAGGGTGCTCTCT i cebCap1.NW_016107827v1 C 0 C 0 s otoGar3.GL873658 967357 41 + 5252280 ---------TTCAGA-CCCAGAACTGACAGC----------TCC--CTCCGTGAGCGTCCTCT-- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1811059 55 + 4416731 CTGTAAGCGTTCAGACCCCAAATCTGAACGT----------TGCTGCCTGGTGATGGCGTTCGCT i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 193251 510 + 287728 I a score=582664.000000 s hg38.chr2_KI270774v1_alt 199848 74 + 223625 -GCAGAAAGAGCCCCTCGAGG---CTTCCTCAGGTGCGGCAGCTGGTCCATGT--CCCTA----GCCC---TGAGGAACCGGCTCTG- s panTro5.chr2A 110010440 74 - 111504155 -GCAGAAAGAGCCCCTGGAGG---CTTCCTCAGGCGTGGCAGCTGGTCCACGT--CCCTA----GCCC---TGAGGAAGCGGCTCTG- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1431412 74 + 114371477 -GCAGAAAGAGCCCCTGGAGG---CTTCCTCAGGCGTGGCAGCTGGTCCACGT--CCCTA----GCCC---TGAGGAAGCAGCTCTG- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1459355 72 + 1464242 -GCAGAA--AGCCCCTCGAGG---CTTCCTCAGGTGTGGCAGCTGGTCCACGT--CCCTA----GCCC---TGAGGAACCGGCTCTG- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1185812 67 + 81552678 -GCAGAAAGAGCCCCTCGAGG---CTTCCTCGGGTGGGGCAGCTGGTCCACGT--CCCTA----GCCC---TGAGGA-------CTA- i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 6256 74 + 10392 -GCAGAAAGAACCCCTCAAGG---CTGCCTCGGGTGGGGCAGCTGGTCCACGT--CCCTA----GCCC---CGAGGAACCAGCTCTG- i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 6397 74 - 11164 -GCAGAAAGAACCCCTCAAGG---CTGCCTCGGGTGGGGCAGCTGGTCCACGT--CCCTA----GCCC---TGAGGAACCAGCTCTG- i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1508670 74 + 3644372 -GCAGAAAGAACCCCTCAAGG---CTGCCTCGGGTGGGGCAGCTGGTCCACGT--CCCTA----GCCC---CGAGGAACCAGCTCTG- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1463792 74 - 10304083 -GCAGAAAGAACCCCTCAAGG---CTGCCTCGGGTGGGGCCGCTGGTCCACGT--CCGTA----GCCC---CGAGGAACCAGCTCTG- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1542778 74 - 107702431 -GCAGAAAGAACCCCTCAAGG---CTGCCTCGGGTGGGGCAGCTGGTCCACGT--CCCTA----GCCC---CGAGGAACCAGCTCTG- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1035323 74 - 2200435 -GCAGAAAGAACCCCTCAAGG---CTGCCTCGGGTGGGGCCGCTGGTCCACGT--CCCTA----GCCC---CGAGGAACCAGCTCTG- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1461229 74 - 13651311 -GCAGAAAGAGCCCCTCCAGG---CCGCCTCGGGTGGGGCAGCTGGTCCACGT--GCCTA----GCCC---TGAGGAGCCAGCTCTG- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1450275 78 - 108792865 -GCAGAAGAAGCCCCTTGAGG---CTTCCTTGGCTGGGGCAGCAGGTCCGTGT--CCCCATCTGGCCC---TGAGAAACCGGCTCTG- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1279632 74 - 7082604 -GTAGAAGGGACCCCTGGAGG---CTTCCTTGGGTGGAGCAGCAGATCTGTGT--CCCCA----GCCC---TGAGCCACCGGCTCTG- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1374745 74 + 1864846 -GCAGAAGGAGCCCCTGGAGG---CTTCCTCGGGTGGGGCAGCAGGTCTGTGT--CCCCA----ACCC---CGAGCATCCGCCTCTG- i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 193761 72 + 287728 -GCAGAAGGAACCCCT-GAGG---CTTCCTTGG-TGGGGCAGCAGGTCCCTGT--CCCCA----ACCC---CGAGCAACCGGCTCTG- i aotNan1.NW_018513311v1 I 510 C 0 s otoGar3.GL873658 967398 25 + 5252280 -------------------------------------------------------GCACA----GCCC---TGCTGGGCAGACTCAG- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1811114 84 + 4416731 GCTGGGGAGGGCTGCAGGAGGGGTTTCTCTGGAGAGCGGCTCTCGGGCTGCATCGCTCCA----GCCCTAGTGGAAACTCAGCCTTGA i dasNov3.JH576208 C 0 C 0 a score=14967.000000 s hg38.chr2_KI270774v1_alt 199922 2 + 223625 TT s panTro5.chr2A 110010514 2 - 111504155 CT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1431486 2 + 114371477 CT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1459427 2 + 1464242 CT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1185879 2 + 81552678 CT i nomLeu3.chr19 C 0 C 0 s macNem1.NW_012011978v1 1508744 2 + 3644372 CG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1463866 2 - 10304083 CT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1542852 2 - 107702431 CT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1035397 2 - 2200435 CT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1461303 2 - 13651311 CT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1450353 2 - 108792865 CT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1279706 2 - 7082604 CT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1374819 2 + 1864846 CT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 193833 2 + 287728 CT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 967423 2 + 5252280 CA i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1811198 2 + 4416731 CT i dasNov3.JH576208 C 0 C 0 e macFas5.chrUn_KE146933 6471 0 - 11164 C e rheMac8.chrUn_NW_015009285v1 6330 0 + 10392 C a score=781.000000 s hg38.chr2_KI270774v1_alt 199924 1 + 223625 C s nomLeu3.chr19 1185881 1 + 81552678 T i nomLeu3.chr19 C 0 C 0 s colAng1.NW_012118821v1 1461305 1 - 13651311 C i colAng1.NW_012118821v1 C 0 C 0 s cebCap1.NW_016107827v1 1374821 1 + 1864846 C i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 193835 1 + 287728 C i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 967425 1 + 5252280 T i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1811200 1 + 4416731 C i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1279708 0 - 7082604 C e calJac3.chr14 1450355 0 - 108792865 C e manLeu1.NW_012103754v1 1035399 0 - 2200435 C e chlSab2.chr14 1542854 0 - 107702431 C e cerAty1.NW_012000820v1 1463868 0 - 10304083 C e macNem1.NW_012011978v1 1508746 0 + 3644372 C e macFas5.chrUn_KE146933 6471 0 - 11164 C e rheMac8.chrUn_NW_015009285v1 6330 0 + 10392 C e gorGor5.CYUI01015607v1 1459429 0 + 1464242 C e panPan2.chr2A 1431488 0 + 114371477 C e panTro5.chr2A 110010516 0 - 111504155 C a score=1500.000000 s hg38.chr2_KI270774v1_alt 199925 1 + 223625 C s colAng1.NW_012118821v1 1461306 1 - 13651311 C i colAng1.NW_012118821v1 C 0 C 0 s cebCap1.NW_016107827v1 1374822 1 + 1864846 C i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 193836 1 + 287728 C i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 967426 1 + 5252280 C i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1811201 1 + 4416731 C i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1279708 0 - 7082604 C e calJac3.chr14 1450355 0 - 108792865 C e manLeu1.NW_012103754v1 1035399 0 - 2200435 C e chlSab2.chr14 1542854 0 - 107702431 C e cerAty1.NW_012000820v1 1463868 0 - 10304083 C e macNem1.NW_012011978v1 1508746 0 + 3644372 C e macFas5.chrUn_KE146933 6471 0 - 11164 C e rheMac8.chrUn_NW_015009285v1 6330 0 + 10392 C e nomLeu3.chr19 1185882 0 + 81552678 C e gorGor5.CYUI01015607v1 1459429 0 + 1464242 C e panPan2.chr2A 1431488 0 + 114371477 C e panTro5.chr2A 110010516 0 - 111504155 C a score=964.000000 s hg38.chr2_KI270774v1_alt 199926 2 + 223625 TT s colAng1.NW_012118821v1 1461307 2 - 13651311 TA i colAng1.NW_012118821v1 C 0 C 0 s cebCap1.NW_016107827v1 1374823 2 + 1864846 TT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 193837 2 + 287728 TT i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1811202 2 + 4416731 TT i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1279708 0 - 7082604 C e otoGar3.GL873658 967427 0 + 5252280 C e calJac3.chr14 1450355 0 - 108792865 C e manLeu1.NW_012103754v1 1035399 0 - 2200435 C e chlSab2.chr14 1542854 0 - 107702431 C e cerAty1.NW_012000820v1 1463868 0 - 10304083 C e macNem1.NW_012011978v1 1508746 0 + 3644372 C e macFas5.chrUn_KE146933 6471 0 - 11164 C e rheMac8.chrUn_NW_015009285v1 6330 0 + 10392 C e nomLeu3.chr19 1185882 0 + 81552678 C e gorGor5.CYUI01015607v1 1459429 0 + 1464242 C e panPan2.chr2A 1431488 0 + 114371477 C e panTro5.chr2A 110010516 0 - 111504155 C a score=600.000000 s hg38.chr2_KI270774v1_alt 199928 1 + 223625 G s cebCap1.NW_016107827v1 1374825 1 + 1864846 G i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 193839 1 + 287728 G i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1811204 1 + 4416731 G i dasNov3.JH576208 C 0 C 0 e saiBol1.JH378218 1279708 0 - 7082604 C e otoGar3.GL873658 967427 0 + 5252280 C e calJac3.chr14 1450355 0 - 108792865 C e colAng1.NW_012118821v1 1461309 0 - 13651311 C e manLeu1.NW_012103754v1 1035399 0 - 2200435 C e chlSab2.chr14 1542854 0 - 107702431 C e cerAty1.NW_012000820v1 1463868 0 - 10304083 C e macNem1.NW_012011978v1 1508746 0 + 3644372 C e macFas5.chrUn_KE146933 6471 0 - 11164 C e rheMac8.chrUn_NW_015009285v1 6330 0 + 10392 C e nomLeu3.chr19 1185882 0 + 81552678 C e gorGor5.CYUI01015607v1 1459429 0 + 1464242 C e panPan2.chr2A 1431488 0 + 114371477 C e panTro5.chr2A 110010516 0 - 111504155 C a score=1202.000000 s hg38.chr2_KI270774v1_alt 199929 5 + 223625 CTGCT s cebCap1.NW_016107827v1 1374826 5 + 1864846 CTGCT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 193840 5 + 287728 CCGCT i aotNan1.NW_018513311v1 C 0 I 79 e saiBol1.JH378218 1279708 0 - 7082604 C e otoGar3.GL873658 967427 0 + 5252280 C e dasNov3.JH576208 1811205 0 + 4416731 C e calJac3.chr14 1450355 0 - 108792865 C e colAng1.NW_012118821v1 1461309 0 - 13651311 C e manLeu1.NW_012103754v1 1035399 0 - 2200435 C e chlSab2.chr14 1542854 0 - 107702431 C e cerAty1.NW_012000820v1 1463868 0 - 10304083 C e macNem1.NW_012011978v1 1508746 0 + 3644372 C e macFas5.chrUn_KE146933 6471 0 - 11164 C e rheMac8.chrUn_NW_015009285v1 6330 0 + 10392 C e nomLeu3.chr19 1185882 0 + 81552678 C e gorGor5.CYUI01015607v1 1459429 0 + 1464242 C e panPan2.chr2A 1431488 0 + 114371477 C e panTro5.chr2A 110010516 0 - 111504155 C a score=1532.000000 s hg38.chr2_KI270774v1_alt 199934 18 + 223625 GCCTCTCACCTTGCTGCT s cebCap1.NW_016107827v1 1374831 18 + 1864846 GCCGCTCACCTTGCTGCT i cebCap1.NW_016107827v1 C 0 I 28 e aotNan1.NW_018513311v1 193845 79 + 287728 I e saiBol1.JH378218 1279708 0 - 7082604 C e otoGar3.GL873658 967427 0 + 5252280 C e dasNov3.JH576208 1811205 0 + 4416731 C e calJac3.chr14 1450355 0 - 108792865 C e colAng1.NW_012118821v1 1461309 0 - 13651311 C e manLeu1.NW_012103754v1 1035399 0 - 2200435 C e chlSab2.chr14 1542854 0 - 107702431 C e cerAty1.NW_012000820v1 1463868 0 - 10304083 C e macNem1.NW_012011978v1 1508746 0 + 3644372 C e macFas5.chrUn_KE146933 6471 0 - 11164 C e rheMac8.chrUn_NW_015009285v1 6330 0 + 10392 C e nomLeu3.chr19 1185882 0 + 81552678 C e gorGor5.CYUI01015607v1 1459429 0 + 1464242 C e panPan2.chr2A 1431488 0 + 114371477 C e panTro5.chr2A 110010516 0 - 111504155 C a score=0.000000 s hg38.chr2_KI270774v1_alt 199952 116 + 223625 GCCTCTCACCTTGCTGCTGCCTCTCACCTTGCTGCTGCCTCTCACCTTGCTGCTGCCTCTCACCTTGCTGCTGCCTCTCACCTTGCTGCTGCCTCTCACCTTGCTGCTGCCTCTCA e aotNan1.NW_018513311v1 193845 79 + 287728 I e saiBol1.JH378218 1279708 0 - 7082604 C e cebCap1.NW_016107827v1 1374849 28 + 1864846 I e otoGar3.GL873658 967427 0 + 5252280 C e dasNov3.JH576208 1811205 0 + 4416731 C e calJac3.chr14 1450355 0 - 108792865 C e colAng1.NW_012118821v1 1461309 0 - 13651311 C e manLeu1.NW_012103754v1 1035399 0 - 2200435 C e chlSab2.chr14 1542854 0 - 107702431 C e cerAty1.NW_012000820v1 1463868 0 - 10304083 C e macNem1.NW_012011978v1 1508746 0 + 3644372 C e macFas5.chrUn_KE146933 6471 0 - 11164 C e rheMac8.chrUn_NW_015009285v1 6330 0 + 10392 C e nomLeu3.chr19 1185882 0 + 81552678 C e gorGor5.CYUI01015607v1 1459429 0 + 1464242 C e panPan2.chr2A 1431488 0 + 114371477 C e panTro5.chr2A 110010516 0 - 111504155 C a score=8130.000000 s hg38.chr2_KI270774v1_alt 200068 14 + 223625 CCTTGCTGCTGCCT s panTro5.chr2A 110010516 14 - 111504155 CCTTGCTGCTGCCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1431488 14 + 114371477 CCTTGCTGCTGCCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1459429 14 + 1464242 CCTTGCTGCTGCCT i gorGor5.CYUI01015607v1 C 0 C 0 e aotNan1.NW_018513311v1 193845 79 + 287728 I e saiBol1.JH378218 1279708 0 - 7082604 C e cebCap1.NW_016107827v1 1374849 28 + 1864846 I e otoGar3.GL873658 967427 0 + 5252280 C e dasNov3.JH576208 1811205 0 + 4416731 C e calJac3.chr14 1450355 0 - 108792865 C e colAng1.NW_012118821v1 1461309 0 - 13651311 C e manLeu1.NW_012103754v1 1035399 0 - 2200435 C e chlSab2.chr14 1542854 0 - 107702431 C e cerAty1.NW_012000820v1 1463868 0 - 10304083 C e macNem1.NW_012011978v1 1508746 0 + 3644372 C e macFas5.chrUn_KE146933 6471 0 - 11164 C e rheMac8.chrUn_NW_015009285v1 6330 0 + 10392 C e nomLeu3.chr19 1185882 0 + 81552678 C a score=1422.000000 s hg38.chr2_KI270774v1_alt 200082 2 + 223625 CT s panTro5.chr2A 110010530 2 - 111504155 CT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1431502 2 + 114371477 CT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1459443 2 + 1464242 CT i gorGor5.CYUI01015607v1 C 0 C 0 s otoGar3.GL873658 967427 2 + 5252280 CC i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 193845 79 + 287728 I e saiBol1.JH378218 1279708 0 - 7082604 C e cebCap1.NW_016107827v1 1374849 28 + 1864846 I e dasNov3.JH576208 1811205 0 + 4416731 C e calJac3.chr14 1450355 0 - 108792865 C e colAng1.NW_012118821v1 1461309 0 - 13651311 C e manLeu1.NW_012103754v1 1035399 0 - 2200435 C e chlSab2.chr14 1542854 0 - 107702431 C e cerAty1.NW_012000820v1 1463868 0 - 10304083 C e macNem1.NW_012011978v1 1508746 0 + 3644372 C e macFas5.chrUn_KE146933 6471 0 - 11164 C e rheMac8.chrUn_NW_015009285v1 6330 0 + 10392 C e nomLeu3.chr19 1185882 0 + 81552678 C a score=2800.000000 s hg38.chr2_KI270774v1_alt 200084 2 + 223625 CA s panTro5.chr2A 110010532 2 - 111504155 CA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1431504 2 + 114371477 CA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1459445 2 + 1464242 CA i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 6330 2 + 10392 CA i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 6471 2 - 11164 CG i macFas5.chrUn_KE146933 C 0 C 0 s otoGar3.GL873658 967429 2 + 5252280 CG i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 193845 79 + 287728 I e saiBol1.JH378218 1279708 0 - 7082604 C e cebCap1.NW_016107827v1 1374849 28 + 1864846 I e dasNov3.JH576208 1811205 0 + 4416731 C e calJac3.chr14 1450355 0 - 108792865 C e colAng1.NW_012118821v1 1461309 0 - 13651311 C e manLeu1.NW_012103754v1 1035399 0 - 2200435 C e chlSab2.chr14 1542854 0 - 107702431 C e cerAty1.NW_012000820v1 1463868 0 - 10304083 C e macNem1.NW_012011978v1 1508746 0 + 3644372 C e nomLeu3.chr19 1185882 0 + 81552678 C a score=6600.000000 s hg38.chr2_KI270774v1_alt 200086 1 + 223625 C s panTro5.chr2A 110010534 1 - 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1431506 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1459447 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 6332 1 + 10392 C i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 6473 1 - 11164 C i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1508746 1 + 3644372 C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1463868 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 1035399 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1450355 1 - 108792865 C i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1279708 1 - 7082604 C i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 967431 1 + 5252280 C i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 193845 79 + 287728 I e cebCap1.NW_016107827v1 1374849 28 + 1864846 I e dasNov3.JH576208 1811205 0 + 4416731 C e colAng1.NW_012118821v1 1461309 0 - 13651311 C e chlSab2.chr14 1542854 0 - 107702431 C e nomLeu3.chr19 1185882 0 + 81552678 C a score=17964.000000 s hg38.chr2_KI270774v1_alt 200087 3 + 223625 CTT s panTro5.chr2A 110010535 3 - 111504155 CTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1431507 3 + 114371477 CTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1459448 3 + 1464242 CTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1185882 3 + 81552678 CTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 6333 3 + 10392 CTT i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 6474 3 - 11164 CTT i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1508747 3 + 3644372 CTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1463869 3 - 10304083 CTT i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 1035400 3 - 2200435 CTT i manLeu1.NW_012103754v1 C 0 C 0 s calJac3.chr14 1450356 3 - 108792865 CTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1279709 3 - 7082604 CTT i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 967432 3 + 5252280 CCA i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 193845 79 + 287728 I e cebCap1.NW_016107827v1 1374849 28 + 1864846 I e dasNov3.JH576208 1811205 0 + 4416731 C e colAng1.NW_012118821v1 1461309 0 - 13651311 C e chlSab2.chr14 1542854 0 - 107702431 C a score=113402.000000 s hg38.chr2_KI270774v1_alt 200090 14 + 223625 GCTGCTGCCTCTCA s panTro5.chr2A 110010538 14 - 111504155 GCTGCTGCCTCTCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1431510 14 + 114371477 GCTGCTGCCTCTCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1459451 14 + 1464242 GCTGCTGCCTCTCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1185885 14 + 81552678 GCTGCTGCCTCTCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 6336 14 + 10392 GTTGCTGCCACTCA i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 6477 14 - 11164 GCTGCTGCCACTCA i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1508750 14 + 3644372 GCTGCTGCCACTCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1463872 14 - 10304083 GCTGCTGCCACTCA i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 1035403 14 - 2200435 GCTGCTGCCACTCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1461309 14 - 13651311 GCTGCTGCCACTCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1450359 14 - 108792865 GCTGCTGCCTCTCG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1279712 14 - 7082604 ACTGCTGCCTCTCA i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 967435 14 + 5252280 GCTGCTGCTTCTCA i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1811205 14 + 4416731 GCTGCCAGTTCTTA i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 193845 79 + 287728 I e cebCap1.NW_016107827v1 1374849 28 + 1864846 I e chlSab2.chr14 1542854 0 - 107702431 C a score=277379.000000 s hg38.chr2_KI270774v1_alt 200104 41 + 223625 CCTTGCTGCTCTTGAGCACCAAACTCCTTGAGCATCCCTTC- s panTro5.chr2A 110010552 41 - 111504155 CCTTGCTGCTCTTGAGCACCAAACTCCTTGAGCATCCCTTC- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1431524 41 + 114371477 CCTTGCTGCTCTTGAGCACCAAACTCCTTGAGCATCCCTTC- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1459465 41 + 1464242 CCTTGCTGCTCTTGAGCACCAAACTCCTTGAGCATCCCTTC- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1185899 40 + 81552678 CCTTGCTGCTCTTGAGAATCAAACTCCTTGAGCATCACTT-- i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 6350 40 + 10392 CCTTGCTGCTCTTGAGAACCAAACTTCTTGAGCATCACTT-- i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 6491 40 - 11164 CCTTGCTGCTCTTGAGAACCAAACTTCTTGAGCATCACTT-- i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1508764 40 + 3644372 CCTTGCTGCTCTTGAGAACCAAACTTCTTGAGCATCACTT-- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1463886 40 - 10304083 ACTTGCTGCTCTTGAGAACCAAACTTCTTGAGCATCACTT-- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1542854 40 - 107702431 CCTTGCTGCTCTTGAGAACCAAACTTCTTGAGCATCACTT-- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1035417 40 - 2200435 ACTTGCTGCTCTTGAGAACCAAACTTCTTGAGCATCACTT-- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1461323 40 - 13651311 CCTTGCTGCTCTTGAGAACCAAACTTCTTGAGCATCACTT-- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1450373 38 - 108792865 CCTTGCTGCCCTTGAGAATCAAACCCTT--AGCATCACTT-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1279726 38 - 7082604 CCTTGCAGCTCTTGAGAACCAAACTCTT--AGCATCACTT-- i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 967449 39 + 5252280 GCCCATGATTCTTAAGAACTAAACTCATTGTTGA-CACGT-- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1811219 41 + 4416731 CCTTGTACGTGTAACGAATCAAATTATTTGACCTTGGTTT-C i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 193845 79 + 287728 I e cebCap1.NW_016107827v1 1374849 28 + 1864846 I a score=423372.000000 s hg38.chr2_KI270774v1_alt 200145 47 + 223625 CATTTTTAATGCACAATTGTTCATTTTATATAGACAGTATT---AAAAAT--- s panTro5.chr2A 110010593 47 - 111504155 CATTTTTAATGCACAATTTTTCATTTTATATAGACAGTATT---AAAAAT--- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1431565 47 + 114371477 CATTTTTAATGCACAATTTTTCATTTTATATAGACAGTATT---AAAAAT--- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1459506 47 + 1464242 CATTTTTAATGCACAATTGTTCATTTTATATAGACAGTATT---AAAAAT--- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1185939 47 + 81552678 CATTTTTAATGCGCAATTGTTCATTTTATATAGACAGTATT---AAAAAT--- i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 6390 47 + 10392 CATTTTTAATGCACAATTGTTCATTTTATATAGAAAGTGTT---AAAAAT--- i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 6531 47 - 11164 CATTTTTAATGCACAATTGTTCATTTTATATAGAAAGTGTT---AAAAAT--- i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1508804 47 + 3644372 CATTTTTAATGCACAATTGTTCATTTTATATAGAAAGTGTT---AAAAAT--- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1463926 47 - 10304083 CATTTTTAATGCACAATTGTTCATTTTTTATAGAAAGTGTT---AAAAAT--- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1542894 47 - 107702431 CATTTTTAATGCACAATTGTTCATTTTATACAGAAAGTGTT---AAAAAT--- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1035457 47 - 2200435 CATTTTTAATGCACAATTGTTCATTTTTTATAGAAAGTGTT---AAAAAT--- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1461363 47 - 13651311 CATTTTTAATGCACAATTGTTCATTTTATATAGAAAGTGTT---AAAAAT--- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1450411 47 - 108792865 CATTTTTAATGCACACTTGTTCCTTTTATAGAGAAAGTATT---TAAAAT--- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1279764 47 - 7082604 CATTTTTAATGCACAGTTGTTCCTTGTATAGAGAAAGTATT---TAAAAT--- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1374877 47 + 1864846 CATTTTTAATGCACAGTTGTTCGTTGTATAGAGAAAGTACT---TAAAAT--- i cebCap1.NW_016107827v1 I 28 C 0 s otoGar3.GL873658 967488 41 + 5252280 ---------TGAACAATTGTTCATTTTAAATGGGAAACATTCTAAAAAAT--- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1811260 47 + 4416731 -ATTTTTAA--ATCAATCATTTGTTTCCAATGGAAAGCATT---AAGAAATAC i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 193845 79 + 287728 I a score=865390.000000 s hg38.chr2_KI270774v1_alt 200192 84 + 223625 AACAGCAAACACTATAAGAA-GTCATTGc-------------aggcccagg--ctgggc----------------------ccc-cagggccatgcccaggATACCTGC-----------------AGATAGAGGCCACA s panTro5.chr2A 110010640 84 - 111504155 AACAGCAAACACTATAAGAA-GTCATTGc-------------aggcccagg--ctgggc----------------------acc-cagggccatgcccaggATACCTGC-----------------AAATAGAGGCCACA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1431612 84 + 114371477 AACAGCAAACACTATAAGAA-GTCATTGc-------------aggcccagg--ctgggc----------------------acc-cagggccatgcccaggATACCTGC-----------------AAATAGAGGCCACA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1459553 84 + 1464242 AACAGCAAACACTATAAGAA-GTCATTGC-------------AAGCACAGG--CTGGGC----------------------CCC-CAGGGCCATGCACAGGATACCTGC-----------------AAATAGAGGCCACA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1185986 84 + 81552678 AACAGCAAACACTATAAGAA-GTCATTGc-------------aggcccagg--ctgggc----------------------ccc-cagggccatgcccaggATGCCAGC-----------------AAATAGAGGCCACA i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 6437 84 + 10392 AACAGCAAACACTATAAAAA-GTCATTGC-------------AGCCCCAGG--CTGGGC----------------------CCC-CAGGGCCGTGCCCAGAATACCTGC-----------------AAATAGAGGCCACA i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 6578 84 - 11164 AACAGCAAACACTATAAAAA-GTCATTGC-------------AGCCCCAGG--CTGGGC----------------------CCC-CAGGGCCATGCCCAGAATACCTGC-----------------AAATAGAGGCCACA i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1508851 84 + 3644372 AACAGCAAACACTATAAAAA-GTCATTGC-------------AGCCCCAGG--CTGGGC----------------------CCC-CAGGGCCATGCCCAGAATACCTGC-----------------AAATAGAGGCCACA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1463973 84 - 10304083 AACAGCAAACACTATAAAAA-GTCATTGC-------------AGCCCCAGG--CTGGGC----------------------CCC-CAGGGTCATGCCCAGAATACCTGC-----------------AAATAGAGGCCACA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1542941 84 - 107702431 AACAGCAAACACTATAAAAA-GTCATTGC-------------AGCCCCAGG--CTGGGC----------------------CCC-CAGGGCTATGCCCAGAATACCTGC-----------------AAATAGAGGCCACA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1035504 84 - 2200435 AACAGCAAACACTATAAAAA-GTCATTGC-------------AGCCGCAGG--CTGGGC----------------------CCC-CAGGGCCATGCCCAGAATACCTGC-----------------AAATAGAGGCCACA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1461410 74 - 13651311 AACAGCAAACACTATCAAAA-GTCATTGC-------------AGCCCCAGG--CTGGGC----------------------CCC-CAGGGCCATGCCCAG---------------------------AATAGAGGCCACA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1450458 85 - 108792865 AACAGCAAACACTATAAGAAGGTCATTGC-------------AGCCCCAGG--CTGGGC----------------------CCC-CAGGACCATACCCAGGATACCTGC-----------------AAATAAAGGCCACA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1279811 84 - 7082604 AACAGCAAACACTGTAAGAA-GTCTTTGC-------------AGCCCCAGG--CTGGGC----------------------CCT-CAGGGCCATACCCAGGATACCTGC-----------------AAATAAAGGCCACA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1374924 84 + 1864846 AACAGCAAACAGTATAAGAA-GTCATTGC-------------AGCCCCAGG--CTGGGC----------------------CCC-CAGGGCCATACCCAGGACACCTGC-----------------AAATAAAGGCCACA i cebCap1.NW_016107827v1 C 0 I 55 s aotNan1.NW_018513311v1 193924 83 + 287728 AACAGCAAACACTATAAGAA-GTCATAGC-------------AGCCCCAGG---TGGGC----------------------CCC-CAGGGCCATACCCAGGATACCTGC-----------------AAATAAAGGCCACA i aotNan1.NW_018513311v1 I 79 I 147 s otoGar3.GL873658 967529 84 + 5252280 AACAGCATAGACGACAAGAA-ACCACTGC-------------TG-CCCAGT--CTGCAC----------------------CCTGCGGGGTCACGCTGACAGCACCTGC-----------------AGGTCTGCACCACG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1811307 136 + 4416731 AACAGCATAAAATATAAGAA-GCCATTGCTgaagagtggatgaagctcaggggttgagcacctgctacccatggtaccagatcc-tgggttcaatcccagg-tacctccttaaaaaaaaAAAAAAAAAAAAGAAGCCAT- i dasNov3.JH576208 C 0 C 0 a score=220168.000000 s hg38.chr2_KI270774v1_alt 200276 36 + 223625 GTTTCTCGGCTTCTGCTCTCCCTGAGTGCCAGGCTC s panTro5.chr2A 110010724 36 - 111504155 GTTTCTCGGCTTCTGCTCTCCCTGAGTGCCAGGCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1431696 36 + 114371477 GTTTCTCGGCTTCTGCTCTCCCTGAGTGCCAGGCTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1459637 36 + 1464242 GTTTCTCGGCTTCTGCTCTCCCTGAGTGCCAGGCTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1186070 36 + 81552678 GTCTCTCGGCTTCTGCTCTCCCTGAGTGCCAGGCTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 6521 36 + 10392 GTTACTCGGCCTCTGCTCTCCCTGAGTGCCAGGCTC i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 6662 36 - 11164 GTTACTAGGCCTCTGCTCTCCCTGAGTGCCAGGCTC i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1508935 36 + 3644372 GTTACTCGGCCTCTGCTCTCCCTGAGTGCCAGGCTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1464057 36 - 10304083 GTTACTCGGCCTCTGCTGTCCCTGAGTGCCAGGCTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1543025 36 - 107702431 GTTACTCGGCCTCTGCTCTCCCTGAGTGCCAGGCTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1035588 36 - 2200435 GTTACTCGGCCTCTGCTCTCCCTGAGTGCCAGGCTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1461484 36 - 13651311 GTCACTTGGCCTCTGCTCTCCCTGAGTGCCAGGCTC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1450543 31 - 108792865 ---CCACGGCCTCCGT--TCATTGGCCGCCAGGCTC i calJac3.chr14 C 0 I 460 s saiBol1.JH378218 1279895 33 - 7082604 ---CCATGGCCTCTGTCCTCCCTGGCCGCCAGGTGC i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 967613 6 + 5252280 -------------------------GTGCCC----- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1811443 35 + 4416731 -TCCTTAATCAGTTGGGTCCCCCAAGGCCCACACTC i dasNov3.JH576208 C 0 C 0 e aotNan1.NW_018513311v1 194007 147 + 287728 I e cebCap1.NW_016107827v1 1375008 55 + 1864846 I a score=1078.000000 s hg38.chr2_KI270774v1_alt 200312 9 + 223625 -CCCCCCCCA-- s panTro5.chr2A 110010760 8 - 111504155 -CCCCCCC-A-- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1431732 8 + 114371477 -CCCCCCC-A-- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1459673 7 + 1464242 -CCCCTC--A-- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1186106 6 + 81552678 -AGCCC---A-- i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 6557 6 + 10392 -AGCCC---A-- i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 6698 6 - 11164 -AGCCC---A-- i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1508971 6 + 3644372 -AGCCC---A-- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1464093 6 - 10304083 -AGCCC---A-- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1543061 6 - 107702431 -AGTCC---A-- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1035624 6 - 2200435 -AGCCC---A-- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1461520 6 - 13651311 -AGCCC---A-- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1451034 4 - 108792865 ---CCC---A-- i calJac3.chr14 I 460 C 0 s saiBol1.JH378218 1279928 6 - 7082604 -AGCCC---A-- i saiBol1.JH378218 C 0 C 0 s dasNov3.JH576208 1811478 9 + 4416731 CCACCC---ACA i dasNov3.JH576208 C 0 I 172 e aotNan1.NW_018513311v1 194007 147 + 287728 I e cebCap1.NW_016107827v1 1375008 55 + 1864846 I e otoGar3.GL873658 967619 0 + 5252280 C a score=75386.000000 s hg38.chr2_KI270774v1_alt 200321 16 + 223625 ATATGCCCTGTGCACA-- s panTro5.chr2A 110010768 16 - 111504155 ACATGCCCTGTGCACA-- i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1431740 16 + 114371477 ACATGCCCTGTGCACA-- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1459680 16 + 1464242 ACATGCCCTGTGCACA-- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1186112 16 + 81552678 ACATGCCCTGTGCATG-- i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 6563 16 + 10392 ACACAACCTGTGCACG-- i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 6704 16 - 11164 ACACAACCTGTGCACG-- i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1508977 16 + 3644372 ACACAACCTGTGCACG-- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1464099 16 - 10304083 ACACAACCTGTGCACG-- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1543067 16 - 107702431 ACACGACCTGTGCACG-- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1035630 16 - 2200435 ACACAACCTGTGCACG-- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1461526 16 - 13651311 ACATGACCTGTGCACA-- i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1451038 16 - 108792865 CCATGACACATCCTCG-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1279934 16 - 7082604 GCAGGACACATCCTGG-- i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 967619 17 + 5252280 -TCTGCCCCGTCCTCAGA i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 194007 147 + 287728 I e cebCap1.NW_016107827v1 1375008 55 + 1864846 I e dasNov3.JH576208 1811487 172 + 4416731 I a score=201542.000000 s hg38.chr2_KI270774v1_alt 200337 24 + 223625 CTCCTGCTGCAGCCAGCCCTGCC-C s panTro5.chr2A 110010784 24 - 111504155 CTCCTCCTGCAGCCAGCCCTGCC-C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1431756 24 + 114371477 CTCCTCCTGCAGCCAGCCCTGCC-C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1459696 24 + 1464242 CTCCTGCTGCAGCCAGCCCTGCC-C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1186128 24 + 81552678 CTCTTGCTGCAGCCAGCCCTGCC-T i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 6579 24 + 10392 CTCCTGCTATAGCCAGCCCTGCC-C i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 6720 24 - 11164 CTCCTGCTATAGCCAGCCCTGCC-C i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1508993 24 + 3644372 CTCCTGCTATAGCCAGCCCTGCC-C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1464115 24 - 10304083 CTCCTGCTATAGCCAGCCCTGCC-C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1543083 24 - 107702431 CTCCTGCTATAGCCAGCCCTGCC-C i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1035646 24 - 2200435 CTCCTGCTAGAGCCAGCCCTGCC-C i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1461542 24 - 13651311 CTCCTGCTATAGCCAGCCCTGCC-C i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1451054 24 - 108792865 CTCCCGCTGCACCCGGGTCTGCC-C i calJac3.chr14 C 0 I 2 s saiBol1.JH378218 1279950 25 - 7082604 CTCCCGCTGCAGCCAGCCCTGCCTC i saiBol1.JH378218 C 0 I 2 s cebCap1.NW_016107827v1 1375063 24 + 1864846 CTCCCGCTGCAGCCAGCCCTGCC-C i cebCap1.NW_016107827v1 I 55 I 103 s otoGar3.GL873658 967636 24 + 5252280 CGGTGgctcagctcagctcagct-c i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 194007 147 + 287728 I e dasNov3.JH576208 1811487 172 + 4416731 I a score=643777.000000 s hg38.chr2_KI270774v1_alt 200361 94 + 223625 TCTGCCAGGATGACCCCTGCAG------------TCACCTTCGCCCTCCACCCCGGCCTTCAGAGCTCCTCACTGGCGGAGCC-CCCAGCACCACCCCATACCACAC s panTro5.chr2A 110010808 94 - 111504155 TCTGCCAGGATGACCCCTGCAG------------TCGCCTTCGCCCTCCACCCCGGCCTTCAGAGCTCCTCACTGGCCGAGCC-CCCAGCACCACCCCATACCACAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1431780 94 + 114371477 TCTGCCAGGATGACCCCTGCAG------------TCGCCTTCGCCCTCCACCCCGGCCTTCAGAGCTCCTCACTGGCCGAGCC-CCCAGCACCACCCCATACCACAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1459720 94 + 1464242 TCTGCCAGGATGACCCCTGTAG------------TCGCCTTTGCCCTCCACCTCGGCCTTCAGAGCTCCTCACTGGCCGAGCC-CCCAGCACCACCCCATACCACAC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1186152 94 + 81552678 TCTGCCAGGATGACCCCTGCAG------------TCGCCTTCGCCCTCCACCCCGGCCTTCAGAGCTCCTCACTGGCTGAGCC-CCCAGCACCACCCCATACCACAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 6603 106 + 10392 TCTGACAGGATGACCCCTGCAGTCTCCTTTGCCTTCACCTTCACCCTCCACCCCGGCCTTCAGAGGTCCTCACTGGTCAAGCC-CCCAGCACCACCCCATACCACAC i rheMac8.chrUn_NW_015009285v1 C 0 I 42 s macFas5.chrUn_KE146933 6744 106 - 11164 TCTGCCAGGATGACCCCTGCAGTCTCCTTTGCCTTCACCTTCACCCTCCACCCCGGCCTTCAGAGCTCCTCACTGGCCAAGCC-CCCAGCACCACCCCATACCACAC i macFas5.chrUn_KE146933 C 0 I 42 s macNem1.NW_012011978v1 1509017 106 + 3644372 TCTGCCAGGATGACCCCTGCAGTCTCCTTTGCCTTCACCTTCACCCTCCACCCCGGCCTTCAGAGCTCCTCACTGGCCAAGCC-CCCAGCACCACCCCATACCACAC i macNem1.NW_012011978v1 C 0 I 42 s cerAty1.NW_012000820v1 1464139 106 - 10304083 TCTGCCAGGATGACCCCTGCAGTCTCCTTTGCCTTCACCTTCACCCTCTACCCCGGCCTTCAGAGCTCCTCACTGGCCAAGCC-CCCAGTACCACCCCATACCACAC i cerAty1.NW_012000820v1 C 0 I 42 s chlSab2.chr14 1543107 106 - 107702431 TCTGCCAGGATGACCCCTGCAGtctccttcgccttcaccttcaccctccaccctggccttcaGAGCTCCTCACTGGCCAAGCC-CCCAGCACCACCCCATACCACAC i chlSab2.chr14 C 0 I 123 s manLeu1.NW_012103754v1 1035670 106 - 2200435 TCTGCCAGGATGACCCCTGCAGTCTCCTTTGCCTTCACCTTCCCCCTCCACCCCGGCCTTCAGAGCTCCTCACTGGCCAAGCC-CCCAGTACCACCCCATACCACAC i manLeu1.NW_012103754v1 C 0 I 42 s colAng1.NW_012118821v1 1461566 106 - 13651311 TCCGCCAGGATGACCCCTGCAGTCTCCTTCCCCTTCGACTTCACCCTCCACCCCGGCCTTCAGAGCGCCTCACTGGCCAAGCC-CCCAGCACCACCCCGTACCACAC i colAng1.NW_012118821v1 C 0 I 41 s calJac3.chr14 1451080 94 - 108792865 CCTGCCGGGATGACTCCTGAGG------------TCTCTTTGGACT-AATCCCTGTACTGCATAGCTCCTCACTGGCTGAGCCTCCTGGCATCACCCCATAGCACAC i calJac3.chr14 I 2 C 0 s saiBol1.JH378218 1279977 94 - 7082604 TCCGCCGGGATGTCTCCTGAGG------------TCTCCTTGGACC-ACACCCCAGCCTGCAGAGCTCCTCGCTGGCTGAGCCTCCCGGCATCACCCCACACCACAC i saiBol1.JH378218 I 2 C 0 s otoGar3.GL873658 967660 71 + 5252280 ----agTGCATGGCCTCTGGAGGA----------GCAGCTCCGCAGGCCACAGCAGACTTCTGTG-------------GGGTC-TGCAGCACC-CCTCAT------- i otoGar3.GL873658 C 0 C 0 e aotNan1.NW_018513311v1 194007 147 + 287728 I e cebCap1.NW_016107827v1 1375087 103 + 1864846 I e dasNov3.JH576208 1811487 172 + 4416731 I a score=48488.000000 s hg38.chr2_KI270774v1_alt 200455 8 + 223625 ATGTATGG s panTro5.chr2A 110010902 8 - 111504155 ATGTATGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1431874 8 + 114371477 ATGTATGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1459814 8 + 1464242 ATGTATGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1186246 8 + 81552678 ATGTATGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 6751 8 + 10392 ATGTATGG i rheMac8.chrUn_NW_015009285v1 I 42 C 0 s macFas5.chrUn_KE146933 6892 8 - 11164 ATGTATGG i macFas5.chrUn_KE146933 I 42 C 0 s macNem1.NW_012011978v1 1509165 8 + 3644372 ATGTATGG i macNem1.NW_012011978v1 I 42 C 0 s cerAty1.NW_012000820v1 1464287 8 - 10304083 ATGTATGG i cerAty1.NW_012000820v1 I 42 C 0 s chlSab2.chr14 1543336 8 - 107702431 ATGTATGG i chlSab2.chr14 I 123 C 0 s manLeu1.NW_012103754v1 1035818 8 - 2200435 ATGTATGG i manLeu1.NW_012103754v1 I 42 C 0 s colAng1.NW_012118821v1 1461713 8 - 13651311 GTGTATGG i colAng1.NW_012118821v1 I 41 C 0 e aotNan1.NW_018513311v1 194007 147 + 287728 I e saiBol1.JH378218 1280071 0 - 7082604 C e cebCap1.NW_016107827v1 1375087 103 + 1864846 I e otoGar3.GL873658 967731 0 + 5252280 C e dasNov3.JH576208 1811487 172 + 4416731 I e calJac3.chr14 1451174 0 - 108792865 C a score=32746.000000 s hg38.chr2_KI270774v1_alt 200463 8 + 223625 ATTATCCA s panTro5.chr2A 110010910 8 - 111504155 ATTATCCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1431882 8 + 114371477 ATTATCCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1459822 8 + 1464242 ATTATCCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1186254 8 + 81552678 ATTATCCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 6759 8 + 10392 ATTATCCG i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 6900 8 - 11164 ATTATCCG i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1509173 8 + 3644372 ATTATCCG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1464295 8 - 10304083 ATTATCCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1543344 8 - 107702431 ATTATCCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1035826 8 - 2200435 ATTATCCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1461721 8 - 13651311 ATTATCCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1451174 2 - 108792865 ---AT--- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1280071 2 - 7082604 ---AT--- i saiBol1.JH378218 C 0 C 0 s otoGar3.GL873658 967731 4 + 5252280 -TCAC--- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1811659 8 + 4416731 ATTCTACA i dasNov3.JH576208 I 172 C 0 e aotNan1.NW_018513311v1 194007 147 + 287728 I e cebCap1.NW_016107827v1 1375087 103 + 1864846 I a score=291548.000000 s hg38.chr2_KI270774v1_alt 200471 51 + 223625 AGCCTCCCAGCCTCACCCGATACCACATA-TCTATGGATTA-TCCAGGACTTT s panTro5.chr2A 110010918 51 - 111504155 AGCCTCCCAGCCTCACCCGATACCACATA-TCTATGGATTA-TCCAGGACTTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1431890 51 + 114371477 AGCCTCCCAGCCTCACCCGATACCACATA-TCTATGGATTA-TCCAGGACTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1459830 51 + 1464242 AGCCTCCCAGCCTCACCCGATACCACATA-TCTATGGATTA-TCCAGGACTTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1186262 51 + 81552678 AGCCTCCCAGCATCACCCAATACCACATA-TCTATGGATTA-TCCAGGACTTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 6767 51 + 10392 AGCCCCCAAACATCACCCGACGCCACATG-TCTATGGATTA-TCCACGACTTT i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 6908 51 - 11164 AGCCCCCAAACATCACCCGACGCCACATG-TCTATGGATTA-TCCACGACTTT i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1509181 51 + 3644372 AGCCCCCAAACATCACCCGACGCCACATG-TCTATGGATTA-TCCACGACTTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1464303 51 - 10304083 AGCCCCCAAACATCACCCGACGCCACATG-TCTATGGATTA-TCCATGACTTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1543352 51 - 107702431 AGCCCCCAAACATCACCCGACGACACGTG-TCTATGGATTA-TCCACGACTTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1035834 51 - 2200435 AGCCCCCAAACATCACCCGACGCCACATG-TCTATGGATTA-TCCATGACTTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1461729 51 - 13651311 AGCCCCCAAACATCACCCGACACCACATG-TCTATGGATTA-TCCACGACTTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1451176 22 - 108792865 ------------------------------CTCATGGATTA-TCCCGGGCCTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1280073 22 - 7082604 ------------------------------CCAATGCATTA-TCCAGGGCCTC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 194154 52 + 287728 AGCCTCCCGGCATCGCCCCACACCACACATCTAATGGATTA-TCCGGGGCCTC i aotNan1.NW_018513311v1 I 147 C 0 s otoGar3.GL873658 967735 26 + 5252280 TGCCCTCCTGCACAGCCC---ACTACACA------------------------ i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1811667 52 + 4416731 ATTCTCATAGCATGACTTAATACCACACA-TCTGAGCATTAGTTTAAAATTAT i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1375087 103 + 1864846 I a score=544732.000000 s hg38.chr2_KI270774v1_alt 200522 65 + 223625 -CCCA----CTCTAAGGCCATCTTCCAGGGTG-TTTCT----CATCTTCCCAATAATAGA---AACTCAACATTCTAG s panTro5.chr2A 110010969 65 - 111504155 -CCCA----CTCTAAGGCCATCTTCCAGGGTG-TTTCT----CATCTTCCCAATAATAGA---TACTCAACATTCTAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1431941 65 + 114371477 -CCCA----CTCTAAGGCCATCTTCCAGGGTG-TTTCT----CATCTTCCCAATAATAGA---AACTCAACATTCTAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1459881 65 + 1464242 -CCCA----CTCTAAGGCCATCTTCTAGGGTG-TTTCT----CATCTTCCCAATAATAGA---AACTCAACATTCTAG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1186313 65 + 81552678 -CCCA----CTCTAAGGCCATCTTTCCGGGTG-TTTCT----CATCTTCCCAATAATAGA---AACTCAACATTCTGG i nomLeu3.chr19 C 0 I 2699 s rheMac8.chrUn_NW_015009285v1 6818 65 + 10392 -CCCA----CCCTAAGGCCATCTTCCAGGCTG-TTTCT----CATCTTCCCAATAATAGA---AACTCAACATTCTAG i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 6959 65 - 11164 -CCCA----CCCTAAGGCCATCTTCCAGGCTG-TTTCT----CATCTTCCCAATAATAGA---AACTCAACATTCTAG i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1509232 65 + 3644372 -CCCA----CCCTAAGGCCATCTTCCAGGCTG-TTTCT----CATCTTCCCAATAATAGA---AACTCAACATTCTAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1464354 65 - 10304083 -CCCA----CCCTACGGCCATCTTCCAGGCTG-TTTCT----CATCTTCCCAATAATAGA---AACTCAACATTCTAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1543403 65 - 107702431 -CCCA----CCCTAAGGCCATCATCCAGGCTG-TTTCT----CATCTTCCCAATAATAGA---AACTCAACATTCTAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1035885 65 - 2200435 -CCCA----CCCTAAGGCCATCTTCCAGGCTG-TTTCT----CATCTTCCCAATAATAGA---AACTCAACATTCTAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1461780 65 - 13651311 -CCCA----CCCTAAGGCCATCTTCCAGGGTG-TTTCT----CATCTTCCCAGTAATAGA---AACTCAACATTCTAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1451198 63 - 108792865 -CCCA----CCCTAAGGCT-GCTTCTAGGGTG-CTGCTTCTAGATCTTCCCAATAA--------ATTCAACACTCTAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1280095 59 - 7082604 -CCCA----CCCTAAGGCT-TCTTCCAGGGTG-CTTCT----GATCTTCCCAATAA--------AGTCAACATTATAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1375190 59 + 1864846 -CCCA----CCCTAAGGCA-TCTTCTAGGGTG-CCTCT----CATCTTCCCAATAA--------ATTCAACATTCTAG i cebCap1.NW_016107827v1 I 103 C 0 s aotNan1.NW_018513311v1 194206 59 + 287728 -TCCA----CCCTAAGGCT-TCTTCCAGGGTG-CTTCT----GATCTTCCCAATAA--------ATTCAACATTCTAG i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 967761 39 + 5252280 ---CA----CCCCACAGTT----------GTG-CTCCT--------------GTAATAAA-------CAACATCTCAG i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1811719 73 + 4416731 ATCCATTGTTCTTGAATTATTTTTCTAACTTGCTTTTT----CATCACCTCAGTAATATAATAAACTCAACATTTTA- i dasNov3.JH576208 C 0 C 0 a score=3076354.000000 s hg38.chr2_KI270774v1_alt 200587 339 + 223625 CAAA-CTTCATT----TTTCTAGCAACTTCTCAGTACACTGAGGAACATCTGCCCCTTGAACAGGAAAT---CTTTTT----CTTACAGTCTTTGCACCTCCTACAGGAACTGGTTTT-------TAAAAACTTGAAAG---CTTAGCAACCAGATGTTACCCATGATCTTTATCGT-TTCCAAAGGGCCTTGTCAAGAATCCACAGTTAATGGACTCTTTT--CTGTT----------GTTTTTATTTTTGTGATCACTTGTAAGGGAAGACTCTGTACCTGCCATCTGCTCTGCATCCTGTCTCTCTGG-GGCTGAGATATGGTAGTAAAGCCAGTTCCCCAT-TTCAGTTATTCTGCAAGGC---CTC--TGACAACT s panTro5.chr2A 110011034 338 - 111504155 CAAA-CTTCATT----TTTCTAGCACCTTCTCAGTACACTGAGGAACATCTGCCCCTTGAACAGGAAAT---CTTTTT----CTTACAGTTTTTGCACCTCCTACAGGAACTGGTTTT-------TAAAAACTTGAAAG---CTTAGCAACCAGATGTTACCCATGATCTTTATCGT-TTCCAAAGGGCCTTGTCAAGAATCCACAGT-AATGGCCTCTTTT--CTGTT----------GTTTTTATTTTTGTGAGCACTTGTAAGGGAAGACTCTGTACCTGCCATCTGCTCTGCATCCTGTCTCTCTGG-GGCTGAGATATGGTAGTAAAGCCAGTTCCCCAT-TTCAGTTATTCTGCAAGGC---CTC--TGACAACT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1432006 338 + 114371477 CAAA-CTTCATT----TTTCTAGCACCTTCTCAGTACACTGAGGAACATCTGCCCCTTGAACAGGAAAT---CTTTTT----CTTACAGTTTTTGCACCTCCTACAGGAACTGGTTTT-------TAAAAACTTGAAAG---CTTAGCAACCAGATGTTACCCATGATCTTTATCGT-TTCCAAAGGGCCTTGTCAAGAATCCACAGT-AATGGCCTCTTTT--CTGTT----------GTTTTTATTTTTGTGAGCACTTGTAAGGGAAGACTCTGTACCTGCCATCTGCTCTGCATCCTGTCTCTCTGG-GGCTGAGATATGGTAGTAAAGCCAGTTCCCCAT-TTCAGTTATTCTGCAAGGC---CTC--TGACAACT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1459946 337 + 1464242 CAAA-CTTCATT----TTTCTAGCAACTTCTCAGTACACTGAGGAACATCTGCCCCTTGAACAGGAAAT---CTTTTT----CTTACAGTTTTTGCACCTCCTACAGGAACTGGTTTT-------TAAAAACTTGAAAG---CTTAGCAACCAGATGTTACCCATGATCATTATCGT-TTCCAAAGGGCCTTGTCAAGAATCCACAGT-AATGGCCTCTTTT--CTGTT----------GTTTTTATTTTTGTGAGCACTTGTAAGGGAAGACTCTGTACCTGCCATCTGCTCTGCATCCTGTCTCTCTGC-GGCTGAGATATGGTAGTAAAGCC-GTTCCCCAT-TTCGGTTATTCTGCAAGGC---CTC--TGACAACT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1189077 338 + 81552678 caaa-cttcaTT----TTTCTAGCAATTTCTCGGTACACTGAGGAACGTCTGCCCCTTGAACAGGAAGT---CTTTGT----CTTACAGTTTTTGCATCTCCTACAGGAACTGGTTTT-------TAAAAACTTGAAAG---CTTAGCAACCAGATGTTACCCATGATCATTGTTGT-TTCCAAAGGTCCTTGTCAAGAATCCACAGT-AATGGCCTCTTTT--CTGTT----------GTTTTTATTTTTGTGAGCACTTGTAAGGGAAGCCTCTGTACCTGCCATCTGCTCTGCATCCTGTTTCTCTGC-TGCTGAGATATAGTAGTAAAGCCAGTTCCCCAT-TTCGGTTATTCTGCAAGGC---CTC--TGATGACT i nomLeu3.chr19 I 2699 C 0 s rheMac8.chrUn_NW_015009285v1 6883 337 + 10392 CAAACCTTCATT----TTTCTAGCAACCTCTCGGTCCACTGAGGAACGTCTGTGCCTTGAACAGGAAAC---CTTTTT----CTCACAGTTTTTGCACCT-CTACAGGGACTGGTTTT-------TTAAAACTTGAAAG---CTTAGCAACCAGAAGTTACCCA-GATCACTGTCGT-TTCCAAAGGGCCTTGTCAACAATCCACAGC-AATGGCCTCTTTT--CTGTT----------GTTTTTGTTTTCGTGGGCACTTGTAAGGGAAGCCCCTGTGCCTGCCATCTGCTCTGCATGCTGTTTCTCTGC-TGCTGAGACGTGGTAGTAAAGCCAGTTCCCCGT-TTCGGTTATTCTGCAAGGC---CTC--TGGCAACT i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 7024 337 - 11164 CAAACCTTCATT----TTTCTAGCAACCTCTCGGTCCACTGAGGAACGTCTGTGCCTTGAACAGGAAAC---CTTTTT----CTCACAGTTTTTGCACCT-CTACAGGGACTGGTTTT-------TTAAAACTTGAAAG---CTTAGCAACCAGAAGTTACCCA-GATCACTGTCGT-TTCCAAAGGGCCTTGTCAACAATCCAAAGC-AATGGCCTCTTTT--CTGTT----------GTTTTTGTTTTCGTGGGCACTTGTAAGGGAAGCCCCTGTGCCTGCCATCTGCTCTGCATGCTGTTTCTCTGC-TGCTGAGACGTGGTAGTAAAGCCAGTTCCCCGT-TTCGGTTATTCTGCAAGGC---CTC--TGGCAACT i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1509297 337 + 3644372 CAAACCTTCATT----TTTCTAGCAACCTCTCGGTCCACTGAGGAACGTATGTGCCTTGAACAGGAAAC---CTTTTT----CTCACAGTTTTTGCACCT-CTGCAGGGACTGGTTTT-------TTAAAACTTGAAAG---CTTAGCAACCAGAAGTTACCCA-GATCACTGTCGT-TTCCAAAGGGCCTTGTCAACAATCCACAGC-GATGGCCTCTTTT--CTGTT----------GTTTTTGTTTTCGTGGGCACTTGTAAGGGAAGCCCCTGTGCCTGCCATCTGCTCTGCATGCTGTTTCTCTGC-TGCTGAGATGTGGTAGTAAAGCCAGTTCCCCGT-TTCGGTTATTCTGCAAGGC---CTC--TGGCAACT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1464419 338 - 10304083 CAAACCTTCATT----TTTCTAGTAACTTCTCGGTACACTGAGGAACGTCTGCGCCTTGAACAGGAAAC---CTTTTT----CTCACAGTTTTTGCACCTCCTACAGGGACTGGTTTT-------TTAAAACTTGAAAG---CTTAGCAACCAGAAGTTACCCA-GATCACTGTCGT-TTCCAAAGGGCCTTGTCAACAATCCACAAC-AATGGCCTCTTTT--CTGTT----------GTTTTTGTTTTCGTGGCCACTTGTAAGGGAAGCCCCTGTGCCTGCCATCTGCTCTGCATGCTGTTTCTCTGC-TGCTGAGATGTGGTAGTAAAGCCAGTTCCTGGT-TTCAGTTATTCTGCAAGGC---CTC--TGGCAACT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1543468 338 - 107702431 CAAACCTTCATT----TTTCTAGCAACTTCTTGGTACACTGAGGAACGTCTGCGCCTTGAACAGGAAAC---CCTTTT----CTCACAGTTTTTGCACCTCCTACAGGAACTGGTTTT-------TAAAAACTTGAAAG---CTTAGCAACCAGAAGTTACCCA-GATCACTGTTGT-TTCCAAAGGGCCTTGTCAACAATCCACAGC-AATGGCCTCTTTT--CTGTT----------GTTTTTATCTTCGTGGCCACTTGTAAGGGAAGCCCCTGCGCCTGCCATCTGCTCTGCATGCTGTTCCTCCGC-TGCTGAGATGTGGTGGTAAAGCCAGTTCCCCGT-TTCAGTTATTCTGCAAGGC---CTC--TGGCAACT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1035950 338 - 2200435 CAAACCTTCATT----TTTCTAGCAACTTCTTGGTACACTGAGGAACGTCTGCGCCTTGAACAAGAAAC---CTTTTT----CTCACAGTTTTTGCACCTCCTACAGGGACTGGTTTT-------TTAAAACTTGAAAG---CTTAGCAACCAGAAGTTACCCA-GATCACTGTCGT-TTCCAAAGGGCCTTGTCAACAATCCACAAC-AATGGCCTCTTTT--CTGTT----------GTTTTTGTTTTCGTGGCCACTTGTAAGGGAAGCCCCTGTGCCTGCCATCTGCTCTGCATGCTGTTTCTCTGC-TGCTGAGATGTGGTAGTAAAGCCAGTTCCTGGT-TTCAGTTATTCTGCAAGGC---CTC--TGGCAACT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1461845 338 - 13651311 CAAACCTTCATT----TTTCTAGCAACTTCTCGGTACACTGAGGAACGTCTGCACCTTGAACAGGAAAC---CTTTTT----CTTACAGTTTTTGCACCTCCTACAGGAACTGGTTTT-------TAAAAACTTGAAAG---TTTAGCAACCAGAAGTTACCCC-GATCGCTGTTGT-TTCCAAAGGGCCTTGTCAACAATCCACAGC-AATGGCCTCTTTT--CTGTT----------GTTTTTGTTTTTGTGGGTACTTGTAAGGGAAGCCCCTGTGCCTGCCATCTGCTCTGCATCCTGTTTCTCCGC-TGCTGAGACGTGGTAGTAAAGCTAGTTCCCCGT-TTTGGTTATTCTGCAAGGC---TTC--TGGCAACT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1451261 329 - 108792865 -CAACCTTCATT----TTTCTAGCAACTTCTTGATACACTGAGGAACATCTGCCCCTTGAACAAGAAAC---CTTTTT----CTTACAGTTTCTATACGACTTACAGGAACTGGTTTT-------T-AAAACTCAGAAG---TTTATCAACCAAACATTGCCCAGGGTCATGATTGT-TTCCAAAGGGCCTTGTCAAGGATCCA--GT-CGTGGGCTGTCTT--CTGTT----------GTAT-----TTTGTGAGCACTTGTAAGGGAGGCCTCTGTGCCTGCGATCCGCTCCGTGTCCTGTTTCTCCGC-TGCTGAGATACAGTA-TAAAGCCAGTTCCCGGT-TTCGGTTATTCTGCAAGGC---CTC--TGACTACT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1280154 319 - 7082604 -GAACATTCATT----TTTCTAGCAACTTCTTGATACACTGAGGAACATCTGCCCCTTGAACAAGAAAC---CTTTTTTTTCTTTACAGTTTCTGTACCTCTTACAGGAACTGGTTTT-------T-AAAACT------------------CAAACGTTACCCAGGGTCATGACTGT-TTCCAAAGGGCCTTGCCAAGAATCCACGGT-CATAGGTTCTTTT--CTGTT----------GTAT-----TTTGTGAACACCTGTAAGGG-GGCCTCCGCGCCTGCGATCTGCTCCGCGTCCTGTTTCTCCGC-TGCTGAGATACGGTA-GAAAGCCAGTTCCCTGT-GTCTGTTACTCTGCAAGGC---CTC--TGACCACT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1375249 330 + 1864846 -CAACCTTCATT----TTTCTAGCAACTTCTTGACATGCTGAAGAACATCTGCCCCTTGAACAAGAAAT---CTTTTT----CTTACAGTTTCTATACCTCTTACAGGAACTGGTTTT-------T-ACAACTCAAAAG---TTTATCAA-CGAAAGTTACCCAGGGTCACGACTGT-TTCCAAAGGGCCTTGTCAAGAATCCACAGT-CACAGGCTCTTTT--CTGTT----------GTAT-----TTTGTGAGCGCTCATAAGGGAGGCCTCTGTGCTTGCGACCTGCTCCACGTCCTCTTTCTCCGC-TGCTGAGATACAGTG-TAAAGCCAGTTCCCTGT-TTCTGTGATTCCGCAAGGC---CTC--TGAGGACT i cebCap1.NW_016107827v1 C 0 I 135 s aotNan1.NW_018513311v1 194265 331 + 287728 -CAACCTTCATT----TTTCTAGCAACTTCTTGATACACTGAGGAACATCTGCGCCTTGGACAAGAAAC---CTTTTT----CTTACCGTTTCTATACCTCTTACAGAAACTGGTTTT-------T-GAAACTCAAAAG---TTTATCAACCAAACATTACCCAGGGTCATGATTGT-TTCCAAAGGGCCTTGTCAAGAATCCACAGT-CATGGGCTCCTTT--CTGTT----------GTAT-----TTTGTGAGCACTTGTAAGGGAGGCCTCTGTGCCTGCGATCCGCTCCGCGTCCCGTTCCTCCGC-TGCTGAGATACAGTA-TAAAGCCAGTTCCCCGT-TTCTGTGATTCTGCAAGGC---CTC--TGACTACT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 967800 309 + 5252280 -CAA-CTCCAGA----CCTC-AGGGCCCTCTCAGCGCACCAAGAAATGCTTG--CCTGACCCAGAAAGA---AACTTC----CTTACACGTTTTTCACATCTCACAAGAACTGGGCTT-------TTAAAACTTGGCAGGACCTTAGCACCCA-ACGTCACCCATGCTCACTGTTAT-TTACAAAGGGGCTCAGGAAGAATCAACAGC-AGTGGCCTTTTTTTCCTATT----------GTTCTGTTGTCTGAGGG-GCTGGTCGGGA---CTTCTGTGCCCGTGAGTTGCTCTTCATCCCATCTCT---------------------GAGGGCC-------CAT-TTCTGCTGCCCTGCAGGAC---TTCGGTGCCAGCC i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1811792 346 + 4416731 -AAA-TATCATCACAGTTTCTAGTGAGTTCTCAGCCCATTAAGAAATGCCTGCTGCTTGACCTTAAAATGAACTTCTT----TATATGTATTGTCTACATCTGATGGGAACTGGTTTTAAAATAATCAAAACTCTAAAC---CTTAGCAATCGAAACTCACCTATAATCACTGCTGTGTTCCTAAGGGTTTAGTTGATAATT-GCTAT-AATGACTTTGTGT--GTGTTTGAGAAACTAGCTATGTTTCTCATAG--------------------TTTAGCTATGGTCAACTCTTTGTCATATTTCTCCACTTGCTGCGATACAGTAATAAAGTCAGGTGCCCATATTCCTTTATAATGCAAAGCTGTCTC--TGCCAACT i dasNov3.JH576208 C 0 C 0 a score=1211220.000000 s hg38.chr2_KI270774v1_alt 200926 148 + 223625 GCTGTGG-----TTGACCCAGATGCCTGCATTTGATGCATGAGCTTATGATCTATCCGGCATATGATATTTCAGTGACGTATTTCTGAGTAGCTTCATAGCTTCTAACAAAACTAACATACACCATAATTCAGA---CAA---CTGTGAGAAATTCCTT s panTro5.chr2A 110011372 148 - 111504155 GCTGTGG-----TTGACCCAGATGCCTGCATTTGATGCATGAGCTTATGATCTATCCGGCATACAATATTTCAGTGACGTATTTCTGAGTAGCTTCATAGCTTCTAACAAAACTAACATACACCATAATTCAGA---CAA---CTGTGAGAAATTCCTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1432344 148 + 114371477 GCTGTGG-----TTGACCCAGATGCCTGCATTTGATGCATGAGCTTATGATCTATCCGGCATACAATATTTCAGTGACGTATTTCTGAGTAGCTTCATAGCTTCTAACAAAACTAACATACACCATAATTCAGA---CAA---CTGTGAGAAATTCCTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1460283 148 + 1464242 ACCGTGG-----TTGACCCAGATGCCTGCATTTGACTCATGAGCTTATGACCTATCCGGCATATGATATTTCAGTGACGTATTTCTGAGTAGCTTCATAGCTTCTAACAAAACTAACATACACCATAATTCAGA---CAA---CTGTGAGAAATTCCTT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1189415 148 + 81552678 ACTGTGG-----TTGACACAGACGCCTGCATTTGACGCATGAGCTTATGATCTATCCAGCATACGATATTTCAGTGATGTATTTCTGAGTAGCTTCATAGCTTCTAACAAAACTAACATACACCATAATTCAGA---CAA---CTGTGAGAAATTCCTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 7220 148 + 10392 ACTGTGG-----TTGACCCAGACGCCCACGTTTGACACAAGAGCTTCTGATCCATCCGGCATACGACATTTCAGTGATGTATTTCTGAGTAGCGTCATAGCTTCTGTCAAAACTAACATACACCATAATTCAGA---CAA---CTGTGAGAAATTCCTT i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 7361 148 - 11164 ACTGTGG-----TTGACCCAGACGCCCACGTTTGACACAAGAGCTTCTGATCCATCCGGCATACGACATTTCAGTGATGTATTTCTGAGTAGCGTCATAGCTTCTGTCAAAACTAACATACACCATAATTCAGA---CAA---CTGTGAGAAATTCCTT i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1509634 148 + 3644372 ACTGTGG-----TTGACCCAGACGCCCACGTTTGACACAAGAGCTTCTGATCCATCCGGCATATGACATTTCAGTGATGTATTTCTGAGTAGCATCATAGCTTCTGTCAAAACTAACATACACCATAATTCAGA---CAA---CTGTGAGAAATTCCTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1464757 148 - 10304083 ACTGTGG-----TTGACCCAGACGCCCACGTTTGACACAAGAGCTTCTGATCCATCTGGCATACGACATTTCAGTGATGTATTTCTGAGTAGCGTCATAGCTTCTGTCAAAACTAACATACACCATAATTCAGA---CAA---CTGTGAGAAATTCCTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1543806 148 - 107702431 ACTGTGG-----TTGACCCAGACACCCACGTTTGACACAAGAGCTTCTGATCCATCCGGCACACGACATTTCAGTGATGTATTTCTGAGTAGCGTCATAGCTTCTGTCAAAACTAACATACACCATAATTCAGA---CAA---CTGTGAGAAATTTCTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1036288 148 - 2200435 ACTGTGG-----TTGACCCAGACGCCCACATTTGACACAAGAGCTTCTGATCCATCTGGCATACGACATTTCAGTGATGTATTTCTGAGTAGCGTCATAGCTTCTGTCAAAACTAACATACACCATAATTCAGA---CAA---CTGTGAGAAATTCCTT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1462183 148 - 13651311 GCTGTGG-----CTGACCCAGATGCCCACGTTTGACACAAGAGCTTCTGATCCGTCCGGCATACGACATTTCAGTGATGTATTTCTGAGTAGCTTCATAGCTTCTGTCAAAACTAACACACACCATAATTCAGA---CAA---CTGTGAGAAATTCCTT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1451590 136 - 108792865 -----------------CCAGATGCCTGCGCTTGACACATGGGCTTATGATCTCTGTGAGATACGGTACTTCAGTGACGTATGTCTGCGCAGCTTCATAGCTTCTAACGGAACTGACATACGCCATCTTTCAGA---CAA---CTGAGAGAAATTCCTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1280473 125 - 7082604 -----------------CCAGATGCCTGCACTTGACAT-----------ATCTCTGCGAGATACGGTACTTCAGCGATGTGTGTCTGAGCAGCTTCAGAGCTTCTCACAGAACTAACATACGCCGTCATTCAGG---CAA---CTGCCAGGAACTCCCC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 194596 128 + 287728 -----------------CCAGATGCCTGCACTTGACACATGAGCTTATGATCTCTGTGAGATACGGTACTTCAGTGACGTGTGTCTGAGCAGCTTCATGGCTTCTAACAGAACTAACA--------CCGTCAGA---CAA---CTGCGAGCAATTCCTC i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 968109 149 + 5252280 ACCGAGG-----TTGACCTGGACTTCTA-GGTTGACACATGAGTGTGTGATCTATCTGGTACTTGATTTTTAAGTGCTACATTTCCTAGTAGATTCATAGTTTCCAACAGAACTAACATCCAGCACAATTCCTA---TAATAGCTATGAGAAATTCTC- i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1812138 145 + 4416731 ATTGTTGCTTTTCTGACCCAGATTTATTTATTTAACGCTTGAGTTTACAATCTATCTGATATGTTATATGTAAGCAATATATATTTTGACTGATTCATAACTTCTAACAAAAATAACATATGCCAAAATTCAGAAAGTAA---CTGGG----------- i dasNov3.JH576208 C 0 C 0 e cebCap1.NW_016107827v1 1375579 135 + 1864846 I a score=1074137.000000 s hg38.chr2_KI270774v1_alt 201074 110 + 223625 CCAGTAGAGAGGTGATAGTAATGGCTAAAGCCATGTGTCAGATGTAATGCTAAGTCATCCTTAGCCACTGTCTCCTCTGATTTTCTG--ATCAATCATCTGACTCAGGTGCT s panTro5.chr2A 110011520 110 - 111504155 CCAGTAGAGAGGTGATAGTAATGGCTAAAGCCATGTGTCAGATGTAATGCTAAGTCATCCTTAGCCACTGTCTCCTCTGATTTTCTG--ATCAATCATCTGACTCAGGTGCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1432492 110 + 114371477 CCAGTAGAGAGGTGATAGTAATGGCTAAAGCCATGTGTCAGATGTAATGCTAAGTCATCCTTAGCCACTGTCTCCTCTGATTTTCTG--ATCAATCATCTGACTCAGGTGCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1460431 110 + 1464242 CCAGTAGAGAGGTGATAGTAATGGCTAAAGCCATGTGTCAGATGTAATGCTAAGTCATCCTTAGCCACTGTCTCCTCTGATTTTCTG--ATCAATCATCTGACTCAGGTGCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1189563 110 + 81552678 CCAATAGAGAGGTGATAGTGATGGCTAAAGccatgtatcagatgcaatgccaagtcatccttagccactgtctcctctgattttctg--ataaatcatccgactcaggtgct i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 7368 110 + 10392 CCAGTAGAGAGGTGATAGTAACAGCTAAAGCCATGTGTTGGAGGCAAGGCTAAGTCATCCTTAGCCACTGTCTCCTCTGATTTTCTG--ATCAATCATCTGACTCAGGTGTT i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 7509 110 - 11164 CCAGTAGAGAGGTGATAGTAACAGCTAAAGCCATGTGTTGGAGGCAAGGCTAAGTCATCCTTAGCCACTGTCTCCTCTGATTTTCTG--ATCAATCATCTGACTCAGGTGTT i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1509782 110 + 3644372 CCAGTAGAGAGGTGATAGTAACAGCTAAAGCCATGTGTTGGAGGCAAGGCTAAGTCATCCTTAGCCACTGTCTCCTCTGATTTTCTG--ATCAATCATCTGACTCAGGTGTT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1464905 110 - 10304083 CCAGTAGAGAGGTGATAGTAACAGCTAAAGCCATGTGTTGGAGGCAATGCTAAGTCATCCTTAGCCACTGTCTCCTCTGATTTTCTG--ATCAATCATCTGACTCAGGTGTT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1543954 110 - 107702431 CCAGTAGAGACGTGATAGTAACAGCTAAAGccgtgtgttggatgcaatgctaagtcatccttagccactgtctcctctgattttctg--atcaatcatctgactcaggtgtt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1036436 110 - 2200435 CCAGTAGAGAGGTGATAGTAACAGCTAAAGccatgtgttggaggcaatgctaagtcatccttagccactgtctcctctgattttctg--atcaatcatctgactcaggtgtt i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1462331 110 - 13651311 CCAGCAGAGAGGTGATAGTAACAGCTAAAGCCATGTGTTGGATGCAATGCTGAGTCATCCTTAGCCACTGTctcctctgattttctg--atcaatcatctgactcaggtgtt i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1451726 105 - 108792865 CCAGTGGAGCGGTGATAGCAGAAGCTAA-GGCATGTATCAGACACGAGGCTAAGTCATTTTTAGCCCCTGTCTCGTCTGATTTTCCA--GTCA----TCTGACTCAGGCACT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1280598 110 - 7082604 CCAGGAGAGCAGTGGCAGCAGTAGCGAAGGGCACGTGCCAGACACGATGCTAAGTCATTTTTAGCCCCTGTCTCCTCTGATTTTCCA--GTCAGTCTTTTGACTCAGGCACT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1375714 110 + 1864846 CCAGTGGGGCGGTGAtagcatttgctgagggcaagtatcagacacaacgctaagtccttttcagcccctgtctcctcggattttctg--gtcagtcatctgactcaggcact i cebCap1.NW_016107827v1 I 135 C 0 s aotNan1.NW_018513311v1 194724 110 + 287728 CCAGTAGAGCGGTGATGGCGGTAGCTAAGGGCGAGTATCAGACACAAGGCTAAGTCATGTTTAGCCCCTGTCTCCTCTGATTTTCCA--GTCAGTCATCTGACTCAGGCACT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 968258 103 + 5252280 CAAACTGACAGGTAATAGTAATAG-TAGAGTCATTTGTCAGATCCAGGGCTAAGTGTGTTTTAGTCACTGTCTTGCTTGATCTTTCG--AT------TGTGTGTCAGGTCCT i otoGar3.GL873658 C 0 C 0 s dasNov3.JH576208 1812283 110 + 4416731 --AATAGAGGGCTAATAATAATAATAGAAGTtatgtgtcagattctatactctgtaatttttaggaactatctcatttaatctttgaacatcaatcatatgaggcagttact i dasNov3.JH576208 C 0 C 0 a score=1133554.000000 s hg38.chr2_KI270774v1_alt 201184 120 + 223625 tgccatggcttgaactgtgcattgcccagaacatatgtttatatcctgaccttt------------aggacc------tcagaacgtaa-ccttatttggaactaaggtctctgcaggtgtaattagttaaaatgagac s panTro5.chr2A 110011630 120 - 111504155 tgccatggcttgaactgtgcattgcccagaacatatgtttatatcctgaccttt------------aggacc------tcagaacgtaa-ccttatttggaactaaggtctctgcaggtgtaattagttaaaatgagat i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1432602 120 + 114371477 tgccatggcttgaactgtgcattgcccagaacatatgtttatatcctgaccttt------------aggacc------tcagaacgtaa-ccttatttggaactaaggtctctgcaggtgtaattagttaaaatgagat i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1460541 120 + 1464242 tgccatggcttgaactgtgcattgcccagaacatatgtttatatcctgaccttt------------aggacc------tcaaaacgtag-ccttatttggaactaaggtctctgcaggtgtaattagttaaaatgagac i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1189673 120 + 81552678 tgccatggcttgaactgggcattgcccaaaacatatgtttatatcctgaccttt------------aggacc------tcagaatgtaa-ccttatttggaactaaggtctctgcaggtgcaattagttaaaatgagat i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 7478 120 + 10392 tgccatggcttgaactgtgtgttgcccaaaacatgtgtttacaccctgaccttt------------aggacc------tcagaatgtaa-ccttatttggaactaaggtctctgcaagtgtaattagttacaatgagat i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 7619 120 - 11164 tgccatggcttgaactgtgtgttgcccaaaacatgtgtttacaccctgaccttt------------aggacc------tcagaatgtaa-ccttatttggaactaaggtctctgcaagtgtaattagttacaatgagat i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1509892 120 + 3644372 tgccatggcttgaactgtgcgttgcccaaaacatgtgtttacaccctgaccttt------------aggacc------tcagaatgtaa-ccttatttggaactaaggtctctgcaagtgtaattagttacaatgagat i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1465015 120 - 10304083 tgccatggcttgaactgtgcgttgcccaaaacatgtgtttataccctgaccttt------------aggacc------tcagaatgtaa-ccttatttggaactaaggtctctgcaagtgtaattagttacaatgagat i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1544064 120 - 107702431 tgccatggcttgaactgtgcattgcccaaaacatgtgtttacaccctgaccttt------------aggacc------tcagaatgtaa-acttatttggaactaaggtctctgcaagtgtaattagttacaatgagat i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1036546 120 - 2200435 tgccatggcttgaactgtgcgttgcccaaaacatgtgttaataccctgaccttt------------aggacc------tcagaatgtaa-ccttatttggaactaaggtctctgcaagtgtaattagttacagtgagat i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1462441 120 - 13651311 tgccatggcttgaactgtgcattgcccaaaacatgtgtttacaccctgaccttt------------aggacc------tcagaatgtaa-ccttatttagagctaaggtctctgcaagtgtaattagttaaaatgagat i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1451831 138 - 108792865 TGCCATGGCTTAAACTGTGCAATCCTCAAAACGTATGTTTGCATCCTGAGCTTTATGTTAGCAGTAAAGACTCTTAAAtcagaatgtaa-ccttgtttggaaataaagtctttgcggatggaattagctaaaacgaggt i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1280708 120 - 7082604 tgccatgacttaaactgtgcaatcctcaaaacatgtgtttatatcctgaccttt------------aggact------tcagaatgtaa-ccttatttggaaatgaagtctttgtggatggaattagctaaaatgaggt i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1375824 120 + 1864846 tgccatggcttacactgtgctgtcctcaaagtgtgtgtttataccctgaccttt------------cgggcc------tcagaatgtag-ccttgtttagaaatgaagtctttgcggatggaattagctaacatgaggt i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 194834 120 + 287728 tgccatggcttaaactgtgcaatcctcaaaacatatgtttatatcctgactgtt------------aggacc------tcagaatgtaagccttatttgg-aatgaagtctttgcggatggaattggctaaaatgagct i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 968361 110 + 5252280 tgctaagggttgaa---tctcttaataaattcccatgttaa-attctaaccccc------------agaatc------tcagaaggtga-ccttatttggaaataaggttttcactagtgtgat------aaatgggac i otoGar3.GL873658 C 0 I 118 e dasNov3.JH576208 1812393 0 + 4416731 C a score=2242147.000000 s hg38.chr2_KI270774v1_alt 201304 258 + 223625 tgtcctggagtagaggggcccctaattcagtatagctggtgttcctctagaaagaagagtttggacagagtcatgctgagcaggcgaaggccatcttgacgggaaggcagagatcagggtggggtttctctaagctggggcctgggaagatcgccagcagccacaggaactgggagggaggc---cgggggagccg-cctgcaggcaccttgatgtggactcctgcctccagagctctaggtcataaa---ctgctgtttaagca s panTro5.chr2A 110011750 261 - 111504155 tgtcctggagtagaggggcccctaattcagtatagctggtgttcctctagaaagaagagtttggacagagtcgtgctgagcaggcgaaggccatcttgacgggaaggcagagatcagggtgtggtttctctaagatggggcctgggaagatcgccagcagccacaggaactgggagggaggcggccgggggagccg-cctgcaggcacctcgatgtggactcctgcctccagagctctaggtcataaa---ctgctgtttaagca i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1432722 261 + 114371477 tgtcctggagtagaggggcccctaattcagtatagctggtgttcctctagaaagaagagtttggacagagtcgtgctgagcaggcgaaggccatcttgacgggaaggcagagatcagggtgtggtttctctaaggtggggcctgggaagatcgccagcagccacaggaactgggagggaggcggccgggggagccg-cctgcaggcacctcgatgtggactcctgcctccagagctctaggtcataaa---ctgctgtttaagca i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1460661 260 + 1464242 tgtcctggagtagagggg-ccctaattcagtatagctggtgttcctctagaaagaagagtttggacagagtcgtgctgagcaggcgaaggccatcttgacgggaaggcagagatcagggtggggtttctctaagctggggcctgggaagagcgccagcagccacaggaactgggagggaggc---tggggaagccg-cctgcaggcacctggatgtggactcctgcctccagagctctaggtcataaatttctgctgtttaagca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1189793 261 + 81552678 tgtcctggagtagaggagcccctaattcaatatagctggtgttcctttagaaagaagagtttggacggagtcctgcctagcaggcgaaggccatctctacgggaaggcagagatcagggtggggtttctctaagctggggcctgggaagattgctggcagtcacaggaactgggagggaggc---cgggggagccg-cctgcaggcacctcgatgtggactcctgcctccagagctctagatcataaacttctgctgtttaagca i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 7598 260 + 10392 tgccctggagtacaggggaccctaattcaatatagctggtgttcctctagaaagaagagtttgcacagagtcatgcccggcaggcaaaggccgtctcgatgggaaggcagacatcagggtggggtttctctaggctggggcctgggaagatcgccagcagtgacaggaactgggagggaggc---c-ggggagccg-cctgcaggcacctcgacgtggactcctgcctccagaactctaggtcataaacttctgctgtttaagca i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 7739 260 - 11164 tgccctggagtacaggggaccctaattcaatatagctggtgttcatctagaaagaagagtttgcacagagtcatgcccggcaggcaaaggccgtctcgatgggaaggcagacatcagggtggggtttctctaggctggggcctgggaagatcgccagcagtgacaggaactgggagggaggc---c-ggggagccg-cctgcaggcacctcgacgtggactcctgcctccagaactctaggtcataaacttctgctgtttaagca i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1510012 260 + 3644372 tgccctggagtacaggggaccctaattcaatatagctggtgttcctctagaaagaagagtttgcacagagtcatgcccagcaggcaaaggccgtctcgatgggaaggcagacatcagggtggggtttctctaggctggggcctgggaagatcgccagcagtgacaggaactgggagggaggc---c-ggggaaccg-cctgcaggcacctcgacgtggactcctgcctccagaactctagatcataaacttctgctgtttaagca i macNem1.NW_012011978v1 C 0 I 144 s cerAty1.NW_012000820v1 1465135 257 - 10304083 tgccctggagtacaggggaccctaattc-atatagctggtgttcctctagaaagaagagtttgcac--agtcatgcccggcaggcaaaggccatctcgatgggaaggcagatatcagggtggggtttctctaggctggggcctaggaagatcgccagtggccacaggaactgggagggaggc---t-ggggagctg-cctgcaggcacctcgacgtggactcctgcctccagaactctagatcataaacttctgctgtttaagca i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1544184 260 - 107702431 tgccctggagtacacgggaccctaattcaatatagctggtgttcctctagaaagaagaatttgcacagagtcatgcccggcaggcaaaggccatcttgacggaaaggcagacatcagggtggggtttctctaagctggggcctgggaagatcgccagcggccacaggaactgggagggaggc---c-ggggagccg-cctgcagtcacctcgacgtggactcctgcctccagaactctaggtcataaacttctgctgtttaagca i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1036666 257 - 2200435 tgccctggagtacaggggaccctaattc-atatagctggtgttcctctagaaagaagagtttgcac--agtcatgcccggcaggcaaaggccatctcgacgggaaggcagatatcagggtggggtttctctaggcgggggcctgggaagatcgccagtggccacaggaactgggagggaggc---t-ggggagctg-cctgcaggcacctcgacgtggactcctgcctccagaactctagatcataaacttctgctgtttaagca i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1462561 261 - 13651311 tgccctggagtacaggggaccctaattcaatatagctggtgttcctctagaaagaagagtttgcacagagtcatgcccagcaggcaaaggccatcttgatgggaaggcagacatcagggtggggtttctctaagctggggcctgggaagattgccagcagtgacaggaactgggagggaggc---caggggagccg-cctgcaggcaccttgatgtggacttctgcctccagaactctaggtcataaacttctgctgtttaagca i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1451969 259 - 108792865 gatccgggagtcgagtggcccctaa-tcaatgtagctgctgttcctctagagagaagaatttggagagagtcctgcctggcaggagaaggccattgcgatgggcaggtggagatcagggtgcggtttctctaagctggggcctgggaaggtggccggcagccaca-gaactgggagggaggc---c-ggggagccgaccctcaggtaccttgatgtggactcctgccttcagagctcgagctctgaaacttccacggtttcagca i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1280828 258 - 7082604 gatcctggaggagagtggccgctaa-ttagcatagccagtgttcctctagagagaagaatttggagagggtcctgcctagcaggagaaggccattgcaatgggcaggtggagatcagagtgcggtttctctaagctggggcctgggaagacagccggcagccaca-gaactgggagggaggc---a-ggggagccgaccctcaggtaccttgatgtggact-ctgccttcagagctggagctcagacacttccactgtttcagca i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1375944 258 + 1864846 gatcctggagtagagcggcccctaa-tcagtatagccggtgttcctctagaaagaagaatttggagagagtcctgcccagcaggagaaggccactgtgatgggcaggtggagatcagggtgtggtttctctaagctggggcctgggaagacggcgggcagccaca-gaactgggaggtaggc---g-ggggagccgacccgcaggaacgtcgatgtggacc-ctgccttcagagcttgggctcagaaacttccactgtttcagca i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 194954 258 + 287728 gatcctggagtagagtggcccctaa-tcagtatagctggtgttcctctagaaagaagaatttggagagagtcctgcctagcaggagaaggcccttgagatggaaaggtggagatcagggtgcggtttcccttagctggggcctggggagatggccggcagccacg-gaactgggaggcaggc-----ggggagccgaCCTGCAGGTACCTCGATGTGGACTCCTGCCTTCAGAGCTCGAGCTCAGAAACTTCCACTGTTTCAGCA i aotNan1.NW_018513311v1 C 0 C 0 e otoGar3.GL873658 968471 118 + 5252280 I e dasNov3.JH576208 1812393 0 + 4416731 C a score=98932.000000 s hg38.chr2_KI270774v1_alt 201562 10 + 223625 gccaagtctg s panTro5.chr2A 110012011 10 - 111504155 gccaagtctg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1432983 10 + 114371477 gccaagtctg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1460921 10 + 1464242 gccaagtctg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1190054 10 + 81552678 gccaagtctg i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 7858 10 + 10392 gccaggtccg i rheMac8.chrUn_NW_015009285v1 C 0 I 244 s macFas5.chrUn_KE146933 7999 10 - 11164 gccaggtccg i macFas5.chrUn_KE146933 C 0 I 144 s macNem1.NW_012011978v1 1510416 10 + 3644372 GCCAGGTCCG i macNem1.NW_012011978v1 I 144 C 0 s cerAty1.NW_012000820v1 1465392 10 - 10304083 gccaggtctg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1544444 10 - 107702431 gccaggtctg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1036923 10 - 2200435 gccaggtctg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1462822 10 - 13651311 gccaggtctg i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1452228 10 - 108792865 gccaggcctg i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1281086 10 - 7082604 gccaggcctg i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1376202 10 + 1864846 gccaggcctg i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 195212 10 + 287728 GCCAGGCCTG i aotNan1.NW_018513311v1 C 0 C 0 e otoGar3.GL873658 968471 118 + 5252280 I e dasNov3.JH576208 1812393 0 + 4416731 C a score=393000.000000 s hg38.chr2_KI270774v1_alt 201572 46 + 223625 tggtcctctgtgactgcagccccagaaaactTAATGaagtgctatg s panTro5.chr2A 110012021 46 - 111504155 tggtcctctgtgactgcagccccagaaaactTAATGaagtgctatg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1432993 46 + 114371477 tggtcctctgtgactgcagccccagaaaactTAATGaagtgctatg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1460931 46 + 1464242 tggtcctctgtgactgcagccccagaaaactTAATGaagtgctatg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1190064 45 + 81552678 tggtcctctgtgactgcagccccataaaac-taacaaagtgctatg i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 8112 45 + 10392 TGGTCCTCTGTGACTGCAGCCGCAGAAAAC-TAACAaagtgctgtg i rheMac8.chrUn_NW_015009285v1 I 244 C 0 s macFas5.chrUn_KE146933 8153 45 - 11164 TGGTCCTCTGTGACTGCAGCCGCAGAAAAC-TAACAAAGTGCTGTG i macFas5.chrUn_KE146933 I 144 C 0 s macNem1.NW_012011978v1 1510426 45 + 3644372 TGGTCCTCTGTGACTGCAGCCGCAGAAAAC-TAACAaagtgctgtg i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1465402 45 - 10304083 tggtcctctgtgactgcagccccaggaaac-taacaaagtgctgtg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1544454 45 - 107702431 tggtcctctgtgactgcagccccagaaaac-taacaaagtgctgtg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1036933 45 - 2200435 tggtcctctgtgactgcagccccagaaaac-taacaaagtgctgtg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1462832 45 - 13651311 tggtcctctgtgactgcagccccagaaaac-taacaaagtgctatg i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1452238 45 - 108792865 tggttctctgggactgcagccccagaaaac-taacaGCgcactagg i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1281096 45 - 7082604 tggttctctgtgactgcagccccagaaaac-taacaGCCCGCTAGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1376212 45 + 1864846 tggttctctgtgactgcagccccagaaaac-tgacagcgatctagg i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 195222 43 + 287728 TGGTTCTCT--GACTACAGCCCCAGAATAC-TAACAGCgcactagg i aotNan1.NW_018513311v1 C 0 C 0 e otoGar3.GL873658 968471 118 + 5252280 I e dasNov3.JH576208 1812393 0 + 4416731 C a score=2826768.000000 s hg38.chr2_KI270774v1_alt 201618 300 + 223625 attgtgtccattttcagtgtagcatgtggaggtggagcgagagcctgttacttgctcaaagctggt-aggcc-cagagcagatccttgaacccaagacctgtctggtgctggaggtcgtgcCACAG------CTGCCCTGCTTCTCCTC--------------------GCGAG-AAGATTATATTCCACATGCCAGGGCTGTTGTTTCAAATAATCATTACCAGTGAAGATTGAATAATCACCTACTCTCTCTACAAGACAC----TATACTGATCTG-----------------------TTTTGGAAAG---------AGAGTACTT----TAACCTTTAAATGGTGTCTCTAGTTTTAGATGGGG s panTro5.chr2A 110012067 300 - 111504155 attgtgtccattttcagtgtagcatgtggaggtggagcgagagcctgttacttgctcaaagctggt-aggcc-cagagcagatccttgaagccaagacctgtctggggctggaggtcgtgcCACAG------CTGCCCTGCTTCTCCTC--------------------GCGAG-AAGATTATATTCCACATGCCAGGGCTGTTGTTTCAAATAATCATTACCAGTGAGGATTGAATAATCACCTACTCTCTCTACAAGACAC----TATATTGATCTG-----------------------TTTTGGGAAG---------AGACTACTT----TAACCTTTAAATGGTGTCTCTAGTTTTAGATGGGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1433039 300 + 114371477 attgtgtccattttcagtgtagcatgtggaggtggagcgagagcctgttacttgctcaaagctggt-aggcc-cagagcagatccttgaagccaagacctgtctggggctggaggtcgtgcCACAG------CTGCCCTGCTTCTCCTC--------------------GCGAG-AAGATTATATTCCACATGCCAGGGCTGTTGTTTCAAATAATCATTACCAGTGAAGATTGAATAATCACCTACTCTCTCTACAAGACAC----TATATTGATCTG-----------------------TTTTGGGAAG---------AGACTACTT----TAACCTTTAAATGGTGTCTCTAGTTTTAGATGGGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1460977 302 + 1464242 attgtgtccattttcagtgtagcatgtggaggtggagcgagagcctgttacttgctcaaagctggt-aggcc-cagagcagatccttgaacccaagacctgtctggtgctggagGTCA-GCCACAG------CTGCCCTGCTTCTCCTC--------------------GCGAG-AAGATTATATTCCACATGCCAGCGCTGTTGTTTCAAATAATCATTACCAGTGAAGACTGAATAATCA-CTACTCTCTCTACAAGACACAGAATCAATAGATCTG-----------------------TTTTGGAAAG---------AGAGTACTT----TAACCTTTAAATGGTGTCTCTAGTTTTAGATGGGG i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1190109 300 + 81552678 attgcgtccattttcagtgtagcatgtggaggtggagcgagagcctgttacttgctcaaagctggt-aggcc-cagagcagatctttgaacccaagacctgtctggtgctagaggtcgtgctGCAG------CTGCCCTGCTTCTCCTT--------------------GCGGG-AAGATTATATTCCACATGCCAGGGCTGTTGCTTCAAATAATCATTACCAGTGAAGACTGAATAATCACCTACTCTCTCTACAAGACGC----TATATTGATCTG-----------------------TTTTGGGAAG---------AGACTACTT----TAACCTTTAAATGGTGTCTCTAGTTTTAGATGGGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 8157 301 + 10392 attatgtccattttccgtgtagcatgaggaggtggagcaagagcctgttactggctcaaagctggtaaagcc-cagagcagatccttgaacccaaggcctgtctggtgctggaggtcgtgcCACAG------CTGCCCGGCTTCTCCTC--------------------GCAGA-AAGATTATATCTCACATGCAGAGGCTGTTGTTTCAAATAATCATTACCAGTGAAGACTGAATAATCACCTACTCTCTCTACAAGGCAC----TGTATTGATCTG-----------------------TTTTGGGAAG---------AGACTACTT----TAACGTTTAAATGGTGTCTCTAGTTTTAGATGGGG i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 8198 300 - 11164 ATTGTGTCCATTTTCCGTGTAGCATGAGGAGGTGGAGCAAGAGCCTGTTACTGGCTCAAAGCTGGT-AAGCC-CAGAGCAGATCCTTGAACCCAAGGCCTGTCTGGTGCTGGAGGTCGTGCCACAG------CTGCCCGGCTTCTCCTC--------------------GCAGA-AAGATTATATCTCACATGCAGAGGCTGTTGTTTCAAATAATCATTACCAGTGAAGACTGAATAATCACCTACTCTCTCTACAAGACAC----TGTATTGATCTG-----------------------TTTTGGGAAG---------AGACTACTT----TAACGTTTAAATGGTGTCTCTAGTTTTAGATGGGG i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1510471 300 + 3644372 attgtgtccattttccatgtagcatgaggaggtggagcaagagcctgttactggctcaaagctggt-aagcc-cagagcagatccttgaacccaaggcctgtctggtgctggaggtcgtgcCACAG------CTGCCCGGCTTCTCCTC--------------------GCAGA-AAGATTATATCTCACATGCAGAGGCTGTTGTTTCAAATAATCATTACCAGTGAAGACTGAATAATCACCTACTCTCTCTACAAGACAC----TGTATTGATCTG-----------------------TTTTGGGAAG---------AGACTACTT----TAACGTTTAAATGGTGTCTCTAGTTTTAGATGGGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1465447 300 - 10304083 attgtgtccattttccgtgtagcatgaggaggtggagcgagagcctgttactgactcaaagctggt-aagcc-cagagcagatccttgaacccaagacctgtctggtgctggaggtcgtgcCACAG------CTGCCCGGATTCTCCTC--------------------ACAGG-AAGATTATATCTCACATGCAGAGGCTGTTGTTTCAAATAATCATTACCAGTGAAGACTGAATAATCACCTACTCTCTCTACAAGACAC----TGTATTGATCTG-----------------------TTTTGGGAAG---------AGACTACTT----TAACGTTTAAATGGTGTCTCTAGTTTTAGATGGGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1544499 300 - 107702431 attgtgtccattttccgtgtagcatgaggaggtggagcgagagcctgttactggctcaaagttggt-aagcc-cagagcagatccttgaacccaagacctgtctggtgctggaggtcgtgcCGCAG------CTGCCTGGCTTCTCCTC--------------------GCAGG-AAGATTATATCTCACATGCAGAGGCTGTTGTTTCAAATAACCATTACCAGTGAAGACTGAATAATCACCTACTCTCTCTACAAGACAC----TGCATTGATCTG-----------------------TTCTGGGAAG---------AGACTACTT----TAACGTTTAAATGGTGTCTCTAGATTTAGATGGGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1036978 300 - 2200435 attgtgtccattttccgtgtagcatgaggaggtagagcgagagcctgttactggctcaaagctggt-aagcc-cagagcagatccttgaacccaagacctgtctggtgctagaggtcgtgcCACAG------CTGCCCGGATTCTCCTC--------------------ACAGG-AAGATTATATCTCACATGCAGAGGCTGTTGTTTCAAATAATCATTACCAGTGAAGACTGAATAATCACCTACTCTCTCTACAAGACAC----TGTATTGATCTG-----------------------TTTTGGGAAG---------AGACTACTT----TAACGTTTAAATGGTGTCTCTAGTTTTAGATGGGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1462877 300 - 13651311 attgtgtccattttcagagtagcatgaggaggtagagcgagagcctgttactggctcaaagctggt-aagcc-cagagcagatccttgaacccaaaacctgtctggtgctggaggtagtgcCACAG------CTGCCCGGCTTCTCCTC--------------------GCAGG-AAGATTATTTCTCACATGCAGAGGCTGTTGTTTCAAATAATCATTACCAGTGAAGACTGAATAATCACCTACTCTCTCTACAAGACAC----CGTATTGATCTG-----------------------TTTTGGGAAG---------AGGCTACTT----TAACGTTTAAATGGTGTCTCTAGTTTTAGATGGGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1452283 300 - 108792865 attatgtcca-tttcagcacagcatgcagaggtggagtgagggtctgtgacttccccaaagctact-aagcc-cagagcagacccttgaacccaagacctgtctggtgctggaggtcgtgccacag------ccgccctgctTGTTCTC--------------------ACAGG-AAGAGTGTATTCCACATGCAG-GGCTGTTGTTTCAAATAATCATTACCGGTGAACACTGAATAATCACCTGTAATCTCTGCAAGACTG----TGT--TGGTCTG-----------------------TTTTGGGAAG---------AAACTACTTAAACTAACATTTAAACAGTGTCTCTAGCTTTAGATGGGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1281141 299 - 7082604 AGTATGTCCATTTTCAGCATAGCATGCAGAGGTGGAGTGAGAGTCTGTGATTTCCCCAAAGCTGCT-GAGCC-CAGAGCAGATCCTTGAAGCCAAGACCCGTCTGGTGCTGGAAGTCGTGCCATAG------CCACCCTGATTGTTCTC--------------------GCAGG-AAGAGTATATTCCACATGCAG-GGCTGTCGGTTCAAATAATCATTGCCAGTGAACATTGAATAATTACCTATAATCTCTGCAAGACAC----TAT----GTCTG-----------------------TTTTCGGAAG---------AAACTACTTAAACTAACATTTAAACAGTGTCTCTAGCTTTAGATGGGG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1376257 299 + 1864846 aatatgtccattttcagcgtagcatgcagaggtggagtgagagtctgtggcttccccaaagctgct-aagcc-cagagcagatccttgaacccaggacctgt-gggtgctggaggtcatgcCACAG------CCG-CTGGCCTCTTCTC--------------------GTAGG-AAGAGTATATTCCACATGCAG-GGCTGTCGGTTCAAATAATCATTACCAGTGAACATTGAATAATCACCTATAATCTCTGCAAGACAC----TATGTTTGTCTG-----------------------TTTTGGGAAG---------AAACCACTTAAACTAACATTTAAACGGTG--TCTAGCTTGAGATAGGG i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 195265 303 + 287728 attacgtccattttcagcatagcatgcagaggtggcgtgagagtctgtgacttccccaaagttgct-aagcc-cagagcagatccttgaacccaagacctgtctggtgctggaggtcatgccagag------ccgccctgctTGTTCTC--------------------ACAGG-AAGAGTGTATTCCACATGCAG-GGCTGCTGTTTCAAATAATCGTTACCAGTGAACATTGAACAATCACCTACAATCTCTGCAAGACAC----TGTGTTTGTCCA-----------------------TCTTGGGAAG---------TTACTCCTTAAACTAACATTTAAATGGTGTCTCTAGCTTTAGATGAGG i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1812393 358 + 4416731 actatctccagtttcagtttatcatactaatgttgagcaagattttgctacttacccaaagctgat-aagtagcagagcaatttctt-aacccaagatctctctgatgctgaaggtcatgctcttgacctctatgccatactgcccctctTTAAAGCTGACCTTGAAATGCAGGTATGATTAGGTGATATAGTCAAGGGCTGTTATTTTAACTAATTGT------TGACTATTTATTCAACACCGAGCTTCTCTACAAGGCAC---CCCTGCTTATTTGGCGATAAGATGCATTAAATATATTTCTATAAAGCTTCACTTTAAATTACTTAAATTAATGTCTAAATAGTGTCTGTATGATTAGATGGGG i dasNov3.JH576208 C 0 I 2 e otoGar3.GL873658 968471 118 + 5252280 I a score=1680958.000000 s hg38.chr2_KI270774v1_alt 201918 153 + 223625 TGGTGGCAGGAAATATTCCCTATGTTTTATGAATCATTTGGTCTTTAAACCTTAAAAACTTTAATAACTAATAATTAAAACCCTCAGCTAACCATGAAATAGACTAAGCAATAAAA---ATTGAATAGGCTGTAAGCAAATAACTTCAAATTAGCT s panTro5.chr2A 110012367 153 - 111504155 TAGTGGCAGGAAATATTCCCTATGTTTTATGAGTCATTTGGTCTTTAAACCTTAAAAACCTTAATTACTAATAATTAAAACCCTCAGCTAACCATGAAATAGACTAAGCAATAAAA---ATTGAATAGGCTGTAAGCAAATAACTTCAAATTAGCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1433339 153 + 114371477 TAGTGGCAGGAAATATTCCCTATGTTTTATGAGTCATTTGGTCTTTAAACCTTAAAAACCTTAATTACTAATAATTAAAACCCTCAGCTAACCATGAAATAGACTAAGCAATAAAA---ATTGAATAGGCTGTAAGCAAATAACTTCAAATTAGCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1461279 146 + 1464242 TGGTGGCAGGAAATATTCCCTATGTTTTACGAATCATTTGGTCTTTAAACCTTAAAAACTT-------TAATAATTAAAACCCTCAGCTAACCATGAAATAGACTAAGCAATAAAA---ATTGAATAGGCTGTAAGCAAATAACTTCAAATTAGCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1190409 156 + 81552678 TGGTGACAGGAAATATTCCCTATGTTTTACAAATCATTTGGTCTTCAAACCTTAAAAACTTTAATTACTGATAATTAAAACCCTCAGCTAACCATGAAATAGACTAAGCAATAAAAAATATTGAATAGTCTGTAAGCAAATAACTTCAAATTAGCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 8458 149 + 10392 TGGTGGTAGGAAATATTCCCCATGTTTTATGAATCATTTGGTCTTTAAACCTTAAAAACTTTAATTACTAATAATTAAAACCCTCAGCTAACCATGAAATAGACTAAGCAATAAAA---ATTGAATAGGCTGT----AAATAACTTCAAATTAGCT i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 8498 149 - 11164 TGGTGGTAGGAAATATTCCCCATGTTTTATGAATCATTCGGTCTTTAAACCTTAAAAACTTTAATTACTAATAATTAAAACCCTCAGCTAACCATGAAATAGACTAAGCAATAAAA---ATTGAATAGGCTGT----AAATAACTTCAAATTAGCT i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1510771 149 + 3644372 TGGTGGTAGGAAATATTCCCCATGTTTTATGAATCATTCGGTCTTTAAACCTTAAAAACTTTAATTACTAATAATTAAAACCCTCAGCTAACCATGAAATAGACTAAGCAATAAAA---ATTGAATAGGCTGT----AAATAACTTCAAATTAGCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1465747 153 - 10304083 TGGTGGTAGGAAATATTCCCTTTGTTTTATGAATCATTTGGTCTTTAAACCTTAAAAACTTTAATTACTAATAATTAAAACCCTCAGCTAACCATGAAATAGAGTAAGCAATAAAA---ATTGAATAGGCTGTAAGCAAATAACTTCAAATTAGCT i cerAty1.NW_012000820v1 C 0 I 6008 s chlSab2.chr14 1544799 153 - 107702431 TGGTGGTAGGAAATATTCCCTATGTTTTATGAATCATTTGGTCTTTAAACCTTAAAAACTTTAATTACTAATAATTAAAACCCTCAGCTAACCATGAAATAGAGTAAGCAATAAAA---ATTGAGTAGGCTGTAAGCAAATAACTTCAGATTAGCT i chlSab2.chr14 C 0 I 1192 s manLeu1.NW_012103754v1 1037278 153 - 2200435 TGGTGGTAGGAAATATTCCCTATGTTTTATGAATCATTTGGTCTTTAAACCTTAAAAACTTTAATTACTAATAATTAAAACCCTCAGCTAACCATGAAATAGAGTAAGCAATAAAA---ATTGAATAGGCTGTAAGCAAATAACTTCAAATTAGCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1463177 153 - 13651311 TGGTGGTAGGAAATACTCCCTATGTTTTATGAATCGTTTGGTCTTTAAACCTTAAAAACTTTAATTACTAATAATTAAAACCCTCAGCTAACCATGAAATAGACTAAGCAATAAAA---ATTGAATAGGCTGTAAGCAAATAACTTCAAATTAGCT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1452583 143 - 108792865 TGGTGGCAGGAAATA----CTATGTTTTATGAATCATTTGGTCTTTAAAGCGTAAA------AATTACTAATAATTAAAACGCTTAGCTAACCATGAAATAGACTAAGCAATAAAA---ATGGAATAGGCTGGAAGCAAATAGCTTCCAATTAGCT i calJac3.chr14 C 0 I 1 s saiBol1.JH378218 1281440 152 - 7082604 TGGTGGCAGGAAATACT-CCTATGTTTTATGAATTATTTGGTCTTTAAAGTATAAAAGTTTTAATTACTAATAATTAAAACCCTTAGCTAACCATGAAATAGACTAAGCAATAAAA---ATGGAATAGGCTGTAAGCAAATAGCTTCCAAATAGCT i saiBol1.JH378218 C 0 I 1 s cebCap1.NW_016107827v1 1376556 148 + 1864846 TGGTGGCAGGAAATAGTCCCTATGTTTTATGAATAATTTGGTCTTTAAAGCATAAAAATTTTAATTACTAATAATTAAAACCCTTAGCTAACCATGAAATAGACTAAGCAATAAC--------AATAGGCTGTAAGCAAATCGCTTCCAATTAGCT i cebCap1.NW_016107827v1 C 0 I 1 s aotNan1.NW_018513311v1 195568 153 + 287728 CAGTGGCAGGAAATACTCCCTATGTTTTATGAATCATTTGGTCTTTAAAGCATAAAAGTTTTAATTACTAATAATTAAAAACCTTAGCTAACCATGAAATAGACTAAGCAATAAAA---ATGGAATTGGCTGTAAGCAAATAGCTTCCAATTAGCT i aotNan1.NW_018513311v1 C 0 I 1 s otoGar3.GL873658 968589 143 + 5252280 TGGGGGCAGGGAATGTTCCCAGAGTGTTAAGAGTCACTTGGGCTTAAATTCTTAGA------CATGACTAATAATTAAAACCCCCAGCTAACCATGAAATCAACTAAGTGAGAAAA---ATTG----GGCTGTAAGTAAACAACTTCACAGTAGCT i otoGar3.GL873658 I 118 C 0 s dasNov3.JH576208 1812753 147 + 4416731 TAGTGACAGAAAATATCATCTATGTTTTTAGAGTTCCTTGGTCTTAAAAGCTTAAA------TGTTACAAATAATTAAAACCCTTAGCTAGCCATGAAATGGATTGAACAATAAAA---ATTAAATAGGCTTTAGGTAAACAATCTCAAATTAGCT i dasNov3.JH576208 I 2 C 0 a score=15300.000000 s hg38.chr2_KI270774v1_alt 202071 1 + 223625 G s panTro5.chr2A 110012520 1 - 111504155 G i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1433492 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1461425 1 + 1464242 G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1190565 1 + 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 8607 1 + 10392 G i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 8647 1 - 11164 G i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1510920 1 + 3644372 G i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1471908 1 - 10304083 G i cerAty1.NW_012000820v1 I 6008 C 0 s chlSab2.chr14 1546144 1 - 107702431 G i chlSab2.chr14 I 1192 C 0 s manLeu1.NW_012103754v1 1037431 1 - 2200435 G i manLeu1.NW_012103754v1 C 0 I 6211 s colAng1.NW_012118821v1 1463330 1 - 13651311 G i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1452727 1 - 108792865 G i calJac3.chr14 I 1 C 0 s saiBol1.JH378218 1281593 1 - 7082604 G i saiBol1.JH378218 I 1 C 0 s cebCap1.NW_016107827v1 1376705 1 + 1864846 G i cebCap1.NW_016107827v1 I 1 C 0 s aotNan1.NW_018513311v1 195722 1 + 287728 G i aotNan1.NW_018513311v1 I 1 C 0 s otoGar3.GL873658 968732 1 + 5252280 G i otoGar3.GL873658 C 0 I 1 s dasNov3.JH576208 1812900 1 + 4416731 G i dasNov3.JH576208 C 0 I 1 a score=105718.000000 s hg38.chr2_KI270774v1_alt 202072 10 + 223625 GTTCTGTAAT s panTro5.chr2A 110012521 10 - 111504155 GTTCTGTAAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1433493 10 + 114371477 GTTCTGTAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1461426 10 + 1464242 GTTCTGTAAT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1190566 10 + 81552678 GTTCTGTAAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 8608 10 + 10392 ATTATATAAT i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 8648 10 - 11164 ATTATATAAT i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1510921 10 + 3644372 ATTATGTAAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1471909 10 - 10304083 GTTCTATAAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1546145 10 - 107702431 GTTCTATAAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1043643 10 - 2200435 GTTCTATAAT i manLeu1.NW_012103754v1 I 6211 C 0 s colAng1.NW_012118821v1 1463331 10 - 13651311 GTTCTATAAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1452728 10 - 108792865 GTCCTGTAAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1281594 10 - 7082604 GTGGTGTAAT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1376706 10 + 1864846 GTTCTGTAAT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 195723 10 + 287728 GCTCTGTAAT i aotNan1.NW_018513311v1 C 0 C 0 s otoGar3.GL873658 968734 10 + 5252280 GTTCTGTAGT i otoGar3.GL873658 I 1 N 0 s dasNov3.JH576208 1812902 10 + 4416731 GTTCTGTAAT i dasNov3.JH576208 I 1 C 0 a score=3831721.000000 s hg38.chr2_KI270774v1_alt 202082 381 + 223625 TAGAACTATGAAATGTATA-ATTGTAACAAAAACTGATACGACTATAATTTCCTATTCATAAACAATTTTGTATTTGCAAACATCCCTATAAACATCTATCACATTATCATTATAATAAATATTAGTGTCTGTAGCCCACA--CTCACAAGAAAAATAGCAATTTTCTTTAAGATTGACAGCCATAGATGAAATGAATACCTTTCCAAGGGAACTTGGGAGAGAAATA--TTTGGCTATAGTTGATTTTAGACTCTGGAGTTCTAAAAATACGCTACCAAGCACCAATTTAGTTTGCAAAATGCCACTTAGCTGAAAGATATGAAAAAGTGGATGTTAATGTGCCATCACACGCTT-------GAGAACACAGGCAGTTACAGAGTCAGAGAC s panTro5.chr2A 110012531 381 - 111504155 TATAACTATTAAATGTATA-ATTGTAACAAAAACTGATACGACTATAATTTCCTATTCATAAACAATTTTGTATTTGCAAACATCCCTATAAACATCTATCACATTATCATTATGATAAATATTAGTGTCTGTAGCCCACA--CTCACAAGAAAAATAGCAATTTTCTTTAAGATTGACAGTCATAGATGAAATGAATACCTTTCCAAGTAAACTTGGGAGAGAAATA--TTTGGCTATAGTTGATTTTAGACTCTGGAGTTCTAAAAATATGCTACCAAGCAGCAATTTAGTTTGCAAAATGCCACTTAGCTGAAAGATATGAAAAAGTGGATGTTAATGTGCCATCACACGCTT-------GAGAACAGAGGCAGTTACAGAGTCAGAGAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1433503 381 + 114371477 TATAACTATTAAATGTATA-ATTGTAACAAAAACTGATACGACTATAATTTCCTATTCATAAACAATTTTGTATTTGCAAACATCCCTATAAACATCTATCACATTATCATTATGATAAATATTAGTGTCTGTAGCCCACA--CTCACAAGAAAAATAGCAATTTTCTTTAAGATTGACAGTCATAGATGAAATGAATACCTTTCCAAGTAAACTTGGGAGAGAAATA--TTTGGCTATAGTTGATTTTAGACTCTGGAGTTCTAAAAATATGCTACCAAGCAGCAATTTAGTTTGCAAAATGCCACTTAGCTGAAAGATATGAAAAAGTGGATGTTAATGTGCCATCACACGCTT-------gagaacagaggcagttacagagtcagagac i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1461436 381 + 1464242 TAGAACTATGAAATGTATA-ATTGTAACAAAAACTGATATGACTATAATTTCCTATTCATAAACAATTTTGTATTTGCAAACATCCCTATAAACATCTATCACATTATCATTATGATAAATATTAGTGTCTGTAGCCCACA--CTCACAAGAAAAATAGCAATTTTCTTTAAGATTGACAGCCATAGATGAAATGAATACCTTTCCAAGGAAACTTGGGAGAGAAATA--TTTGGCTATAGTTGATTTTAGACTCTGGAGTTCTAAAAATATGCTACCAAGCACCAATTTAGTTTGCAAAATGCCACTTAGCTGAAAGATACGAAAAAGTGGATGTTAATGTGCCATCACACGCTT-------gagaacagaggcagttacagagtcagagac i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1190576 378 + 81552678 TATAACTATTAAATGTATA-ATTGTAACAAAAACTGATATGACTATAATTTCCTGT---TAAACAATTTTGTATTTGCAAACATCCCCATAAACATCTATCACATTATCATTATGATAAACATTAGTGTCTGTAGCCCACA--CCCACAAGAAAAATAGCAATTTTCTCTAAGATTGACAGCTATAGATTAAATGAATACCTTTCCAAGGAAACTTGGGAAAGAAATA--TTTGACTATAGTTGATTTTAGACTCTGGAGTTCTAAAAATGTGCTACCGAGCACCAATTTAGTTTGCAAAATGCCACTTAGCTGAAAGATATGAAAAAGTGGATGTTAATGTAGGAACACACGCTT-------gagaacagaggcagttacagagtcagagac i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 8618 390 + 10392 TATAACTATTAAATGTGTA-ATTGTAACAAAAACTGATGTGACTATAATTTCCTGTTCATAAACAATTTTGTATTTCCAAACATCCCTATAGACATCTATCACATTATCATTATGATAAATATTAGTGTCTGTAGTCCACA--CTCATGAGAAAAATTGCAATTTTCCTTAAGATTGATAGCCATAGATTAAATGAATACCTTTCCAAGGAAACGTGGGAGATAAATATTTTTGGCTGTAGTTGATTTTAGACTCTGGAGTTCTAAAAATATGCTACCAAGCACCAATTTAGTTTGCAAAGTGCCACTTACCTGAAAGATATGAAAAAGTGGATGTTAACATGCCAACACACGCTTAAGCacagagaacaggggcagttacagagtcagagac i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 8658 390 - 11164 TATAACTATTAAATGTGTA-ATTGTAACAAAAACTGATGTGACTATAATTTCCTGTTCATAAACAATTTTGTATTTGCAAACATCCCTATAGACATCTATCACATTATCATTATGATAAATATTAGTGTCTGTAGTCCACA--CTCATGAGAAAAATTGCAATTTTCCTTAAGATTGATAGCCATAGATTAAATGAATACCTTTCCAAGGAAACGTGGGAGATAAATATTTTTGGCTGTAGTTGATTTTAGACTCTGGAGTTCTAAAAATATGCTACCAAGCACCAATTTAGTTTGCAAAGTGCCACTTAGCTGAAAGATATGAAAAAGTGGATGTTAACATGCCAACACACGCTTAAGCACAGAGAACAGGGGCAGTTACAGAGTCAGAGAC i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1510931 388 + 3644372 TATAACTATTAAATGTATA-ATTGTAACAAAAACTGATGTGACTATAATTTCCTGTTCATAAACAATTTTGTATTTGCAAACATCCCTATAGACATCTATCACATTATCATTATGATAAATATTAGTGTCTGTAGTCCACA--CTCATGAGAAAAATTGCAATTTTCCATAAGATTGATAGCCATAGATTAAATGAATACCTTTCCAAGGAAACGTGGGAGATAAATA--TTTGGCTGTAGTTGATTTTAGACTCTGGAGTTCTAAAAATATGCTACCAAGCACCAATTTAGTTTGCAAAGTGCCACTTAGCTGAAAGATATGAAAAAGTGGATGTTAACATGCCAACACACGCTTAAGCacagagaacaggggcagttacagagtcagagac i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1471919 388 - 10304083 TATAACTATTAAATGTGTA-ATTGTAACAAAAACTGATGTGACTATAATTTCCTGTTCATAAACAATTTTGTATTTGCAAACATCCCTATAGACATCTATCACATTATCATTATGATGAATATTAGTGTCTGTAGTAGACA--CTCATGAGAAAAATTGCAATTTTCCTTAAGATTGACAGCCATAGATTAAATGAATAACTTTCCAAGGAAACTTGGGAGATAAATA--TTTGGCTGTAGTTGATTTTAGACTCTGGAGTTCTAAAAATATGCTACCAAGCACCAATTTAGTTTGCAAAGTGCCACTTAGCTGAAAGATATGAAAAAGTGGATGTTAACATGCCAACACACACTTAAGCACAGAGAACAGGGGCAGTTACAGAGTCAGAGAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1546155 388 - 107702431 TATAACTATTAAATGTGTA-ATTGTAACAAAAACTGATGTGACTATAATTTCCTGTTCATAAACAATTTTGTATTTGCAAACATCCCTATAGACATCTATCACATTATCATCATGATAAATATTAGTGTCTGTAGTTCACA--CTCATAAGAAAAATTGCAATTTTCCTTAAGATTGACAGCCATAGATTAAATGAATACCTTTCCAAGGAAACTTGGGAGATAAATA--TTTGGCTGTAGTTGATTTTAGACTCTGGAGTTCTAAAAATATGCTACCAAGCACCAATTTAGTTTGCAAAGTGCCACTTAGCTGAAAGATATGAAAAAGTGGATGTTAACTTGCCAACACACGCTTAAGCACAGAGAACAGGGGCAGTTACAGAGTCAGAAAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1043653 388 - 2200435 TATAACTATTAAATGTGTA-ATTGTAACAAAAACTGATGTGACTATAATTTCCTGTTCATAAACAATTTTGTATTTGCAAACATCCCTATAGACGTCTATCACATTATCATTATGATGAATATTAGTGTCTGTAGTCCACA--CTCATGAGAAAAATTGCAATTTTCCTTAAGATTGACAGCCATAGATTAAATGAATAACTTTCCAAGGAAACTTGGGAGATAAATA--TTTGGCTGTAGTTGATTTTAGACTCTGGAGTTCTAAAAATATGCTACCAAGCACCAATTTAGTTTGCAAAGTGCCACTTAGCTGAAAGATATGAAAAAGTGGATGTTAACATGCCAACACACGCTTAAGCACAGAGAACAGGGGCAGTTACAGAGTCAGAGAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1463341 388 - 13651311 TATAACTATTAAATGTGTA-ATTGTAACAAAAACTGATGTGACTATAATTTCCTGTTCATAAACAATTTTGTATTTGCAAACATCCCTATAGACATCTATCACATTATCATTATGATAAATATTAGTGTCTGTAGTCCACA--CTCATAAGAAAAATTGCAATTTTCCTTAAGATTGACAGCCATAGATTAAATGAATACCTTTCCAAGGAAACTTGGGAGATAAATA--TTTGGCTGTAGTTGATTTTAGACTCTGGAGTTCTCAAAATATGCTACCAAGCACCAATTTAGTTTGCAAAGTGCCACTTAGCTGAAAGATATGAAAAAGTGGATGTTAACACGCCAACACACGCTTAAGCACAGAGAACAGGGGCAGTTACAGAGTCAGAGAC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1452738 369 - 108792865 TGTATCAATAGAATGTGTAGATTGTAACAAAAGCTGATGTTACTCTAATTTCCTGTTTATAAACAATTGTGCATTTGCAAACATCTCCACAA--ATCTATCGCATTATCACTGTGAAAAATATGAGTGTCTGCAG-CCACA--TTCACAAGAAAAACAGCGGTTTTCTTTAAGATTGGCAGCCACAGAGTAAATGAACATCTTTCCAAGGAAACCTGGGAGAGAAATG--TTTGGCTACAGTTGACTATAGACTCTGGAGTTCTAAAAATATGCTCCCAAGCACCAGCTTAGCCTGCAAA-TGCCACTTAGC---------TGAAGAAGTAGATACTAATGTGCCAACAGGTGATT-------GAGGAAAGAGGCGGCTATTGACACAGAGAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1281604 382 - 7082604 TATATCTATTAAACGTGTATATTGTAACAAAAAGTGATATTACTCTAATTTCCTATTTATAAACAATTGTGCATTTGCAAACATCTCTACAAACATCTATCGCATTATCACTATGAAAAATATGAATGTCTACAGCCCACA--TTCACAGGAAAAATAGCAAATTTCTCTAAGATTGACAGCCATAGATTAAATGAACATCTTTCCAAGGAAACTTGGGAGAGAAATA--TTTGGCTATAGTTGACTGTAGACTCTGGAGTTCTAAAGATATGCTACCAAGCACCAATTTAGTTTGCAAAGTGCCACTTAGCTGAAAGACGTGAAGAAGTAGATATTACCGTGCCAACACGTGCTT-------GAGAAAAGAGGCGGTTATTGACTCGGAGAC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1376716 382 + 1864846 TATATCTATCAAATGTGTATATTGTAACAAAAACTGACATTACTCTAATTTCCTATCTATAAACAATTGTGCATTTGCAAACGTCTCTACAAACATCTATCACATTATCACTATGAAAAATATGAGTGCCTGTAGCCCACA--TTCGCAAGAAAAATAGCAATTTTCTTTGAGATTGACAGACATAGATTAAATGAACATCTTTCCAAGGATACTTGGGAGAGAAATA--TTTGGCTATAGTTGACTATAGACCCTGGAGTTCTAAAAATACGCTACCAAGCACCAATTTAGTTTGCAAAATGCCACTTAGCTGAAAGACGCGAAGAAGTCGATATTAATGTGCCAACACGTGCTT-------GAGAACGGAGGCGGTTATTGACTCGGAGAC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 195733 382 + 287728 TATATCTATGAAATGTGTACATTGTAACAAAAACTGATATTACTCTAATTTCCTATTTATAAACAATTGTGCATTTGCAAACATCTCTACAAACATCTATCACATTATCACTATGAAAAATATGAGTGTCTGTAGCCCACA--TTCACAAGAAAAATAGCAATTTTCTTTAAGATTGACAGCCATAGATTAAATGAACATCTTTCCAAGGAAACTTGGGAGAGAAATA--TTTGGCTATAGTTGACTATAGACTCTGGAGTTCTAAAAATATGCTACCAAGCACCGATTTACTTTGCAAAATGCCACTTAGCTGAAAGACGTGAAGAAGTGGATATTAATGTGCCAACAGGTGCTG-------GAGAAAAGAGGTGGTTATCGGCTCGGAGAC i aotNan1.NW_018513311v1 C 0 C 0 s dasNov3.JH576208 1812912 374 + 4416731 CATGTCTATTAAATGTTCATATTGTGAAAA-----------ACTATAATTTAGAATTCAGACACAATTTTGTATTTACAAACATCTCTATAAACATCTATTACCTTATCATTAAGAAAAATGTTAGCTTCTCTAATCCACACTCTCAAAAAAAAAATAGCTGTTTTCTTTATGATTGGCAGCCATAAAATAAATGAATACCTTTCAAAGGAAATTTGGGAGACAAGTA--TTCTGCCACACTTGATTTTAGACTCTGAAGCCTTAAAAATATGCTATGAAGCACCAATTTAGCTTGCAAAATATTATTTACCAAATGCCCTGAAAAAAATGGATATTAACTTGTTAAAACTCTTTT------AACAAGGGGAAGCAGTAAATTAGTAAGAGGC i dasNov3.JH576208 C 0 N 0 a score=2601288.000000 s hg38.chr2_KI270774v1_alt 202463 281 + 223625 CATAACAGGGAAGACCCTGGGGCTCCAGGGCAGAAAC-ATCCTGGACCAAAACCACAGCACCCCCAGACCTGTGATTAGGTGAGCTCAGAAGGTCAAGTCACTCATT-AGGAAATGTCTTCCCACCACCTACCCTGAGACCCCTATTCTGCTCCCAGCAAATGGGCTCAACACAATCCCAGCCTCGC--CTCC--CTGTGTCTTATTCTTCAGCTTTTAAAAACATGATCTTATTTCCACCTTAGGGCATTATTGTGCGGTgaggagtagggaggagaacagagagg s panTro5.chr2A 110012912 283 - 111504155 CATAACAGGGAAGACCCTGGGGCTCCAGGGCAGAAAC-ATCCTGGACCAAAACCACAGCACCCCCAGACCTGTGATTAGGTGAGCTCAGAAGGTCAAGTCACTCATTCAGGAAATGTCTTCCCACCACCTACCCTGAGACCCCCATTCTGCTCCCAGCAAACGGGCTCAACACAATCCCAGCCTCGC--CTCCCTCTGTGTCTCATTCTTCAGC-TTTAAAAACATGATCTTATTTCCACCTTAGGGCATTATTGTGCGGTgaggagtagggaggagaacagagagg i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1433884 283 + 114371477 cataacagggaagaCCCTGGGGCTCCAGGGCAGAAAC-ATCCTGGACCAAAACCACAGCACCCCCAGACCTGTGATTAGGTGAGCTCAGAAGGTCAAGTCACTCATTCAGGAAATGTCTTCCCACCACCTACCCTGAGACCCCCATTCTGCTCCCAGCAAACGGGCTCAACACAATCCCAGCCTCGC--CTCCCTCTGTGTCTCATTCTTCAGC-TTTAAAAACATGATCTTATTTCCACCTTAGGGCATTATTGTGCGGTgaggagtagggaggagaacagagagg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1461817 280 + 1464242 cataacagggaagaCCCTGGGGCTCCAGGGCAGAAAC-ATCCTGGACCAAAACCACAGCACCCCCAGACCTGTGATTAGGTGAGCTCAGAAGGTCAAGTCACTCATTCAGGAAATGTCTTCCCACTACCTACCCTGAGACCCCCATTCTGCTCCCAGCAAATGGGCTCAACACAATCCCAGCCTCGC--CTCCCTCTGTGTCTCATTCTTCAGC-TTTAAAAACATGATCTTATTTCCACCTTAGGGCATTATTGTGCGGTgaggagtag---ggagaacagagagg i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1190954 282 + 81552678 cataacagggaagaCCCTGGGGCTCCAGGAGAGAAAC-ATCCTGGACTAAAACCACAGCACCCCCAGACCCATGATTAGATGAGCTCAGAAGGTCAACTCACTCATTCAGGAAATGTCTCCCCACCACCTACCCTGAGACCTC-ATGCTGCTCCCAGCAAACGGGCTCAACACAATCCCAGCCTCAA--CTCCCTCTGTGTCTCATTCTTCAGC-TTTAAAAACATGATCTGATTTCCACCTTAGGGCATTACTGTGCGGTGAGGAGTAGGGAGGAGAACAGAGGGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 9008 282 + 10392 CATAAC-GGGAAGACCCCGGGGCTCCAGGGGAGAAAC-GTCCTGGACAAAAGCCACAGCACCCCCAGACCCGTGATTCGATGAGCTCAGAAGGTCAAGTCACTTATTCAGGAAATGTCTTCCCGTCACCTACCCTGAGACCCCCACGCTGCTCCCAGCAAACGGGCTCAATGCAATCCCAGCCTCGC--CTCCCTCTGTGTCTCATTCTTCAGC-TTTAAAAACATGGTCTTATTTCCAACTTAGGGCGTTATTGTGCGGTGAGGAGTAGGGAGGAGAACAGAGAGG i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 9048 282 - 11164 CATAAC-GGGAAGACCCTGGGGCTCCAGGGGAGAAAC-GTCCTGGACAAAAGCCACAGCACCCCCAGACCCGTGATTCGATGAGCTCAGAAGGTCAAGTCACTTATTCAGGAAATGTCTTCCCGTCACCTACCCTGAGACCCCCACGCTGCTCCCAGCAAACGGGCTCAATGCAATCCCAGCCTCGC--CTCCCTCTGTGTCTCATTCTTCAGC-TTTAAAAACATGGTCTTATTTCCAACTTAGGGCGTTATTGTGCGGTGAggagtagggaggagaacagagagg i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1511319 282 + 3644372 CATAAC-GGGAAGACCCTGGGGCTCCAGGGGAGAAAC-GTTCTGGACAAAAGCCACAGCACCCCCAGACCCATGATTCGATGAGCTCAGAAGGTCAAGTCACTTATTCAGGAAATGTCTTCCCGTCACCTACCCTGAGACCCCCACGCTGCTCCCAGCAAACGGGCTCAATGCAATCCCAGCCTCGC--CTCCCTCTGTGTCTCATTCTTCAGC-TTTAAAAACATGGTCTTATTTCCAACTTAGGGCATTATTGTGCGGTGAGGAGTAGGGAGGAGAACAGAGAGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1472307 283 - 10304083 CATAATGGGGAAGACGCTGGGGCTCCAGGGGAGAAAC-ATCCTGGACAAAAGCCACAGCACCCCCAGACCTGTGATTCGATGAGCTCAGAAGGTCAAGTCACTTATTCAGGAAATGTCTTCCCGTCACCTACCCTGAGACCCCCACGCTGCTCCCAGCAAACGGGCTCAGTGCGATCCCAGCCTCGC--TTCCCTCTGTGTCTCATTCTTCAGC-TTTAAAAACGTGGTCTTATTTCCAACTTAGGGCATTATTGTGCGGTAAGgagtagggaggagaacagagagg i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1546543 283 - 107702431 CATAATGGGGAAGACCCTGGGGCTCCAGGGGAGAAAC-ATCCTGGACAAAAGCCACAGCACCCCCAGACCTGTGATTCGATGAGCTCAGAAGGTCAAGTCACTTATTCAGGAAATGTCTTCCCGTCACCTACCCTGAGACCCCCACGCTGCTCTCAGCAAACGGGCTCAATGCAATCCTAGCCTCGC--CTCCCTCTGTGTCTCATTCTTCAGC-TTTAAAAACATGGTCTTATTTCCAACTTAGGGCATTATTGTGTGGTGAGGAGTAGGGAGGAAAACAGAGAGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1044041 283 - 2200435 CATACTGGGGAAGACCCTGGGGCTCCAGGGGAGAAAC-ATCCTGGACAAAAGCCACAGCACCCCCAGACCTGTGATTCGACGAGCTCAGAAGGTCAAGTCACTTATTCAGGAAATGTCTTCCCGTCACCTACCCTGAGACCCCCACGCTGCTCCCAGCAAACGGGCTCAATGCAATCCCAGCCTCGC--CTCCCTCTGTGTCTCATTCTTCAGC-TTTAAAAACGTGGTCTTATTTCCAACTTAGGGCATTATTGTGCGGTAAGgagtagggaggagaacagagagg i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1463729 283 - 13651311 CATAACGGGGAAGACCCTGGGGCTCCAGGGGAGAAAC-ATCCTGGACAAAAGCCACAGCACCCCCAGACCTGTGACTGGATGAGCTCAGAAGGTCAAGTCACTTATTCAGGAAATGTCTTCCCACCCCCTACCCTGAGACCCCCAAGCTGCTCCCAGCAAATGGGCCCAATGCAATCCCAGCCTCAC--CTCCCTCTGTGTCTCATCCTTCAGC-TTTAAAAACATGATCTTATTTCCAACTTAGGGCATTATTGTGcggtgaggagtagggaggagaacagagagg i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1453107 276 - 108792865 --TAACGGGGAAGACCTTGGGGCTTCCGGGAAA--AC-GTCCTCCACCAAAGCCACAGCAGCCC--GACCCGTGATGGGGTGAGCTCAGAAGGTCAAGTCACTCATTCAGGAAAAGTCTTCCCAACGCCTGCCCTGAGACCCTCGTGCTGCTCCCAGCAACCCGGCTCAGCTCAATGCCA-CCTCAC--CTCTCTCTGTGTCTCATTCTTCAGC-TTTAAAAACATCTTATGATTTCCAGTGTATGGCATCGTTGCTCGGTAAGGAGTAgggaggagaacggagagg i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1281986 279 - 7082604 CGTAACGGGGAAGACCCTGGGGCTTCCGGGGGG--ACTATCCTCCACCAAAACCACAGCACCCT-AGACCCGTGAT--GGTGAGCTCAGAAGGTCAAGTCACTCATTCAGGAAAAGTCTTCCCAACACCTGCCCTGGGACCCTCGTGCTGCTCCCAGCAAACCGGCTCAGCTCCATCCCAGCCTCAC--CTCTCTCTGTGTCTCATTCTTCAGC-TTTAAAAACATGTTATTATTTCCAACTCAGGGCATCGTTGCTAGGTAAGGAGTagggaggagaacagagagg i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1377098 284 + 1864846 CGCAGCGGGGAAGACCCTGGGGCTTCCGGGGGGGAAC-ATCCTCCACCAAAACCACAGCACCCC-AGACCCGTGATTGGGTGAGCTCAGAAGGTCAAGTCACTCATTCAGGAAAAGTCTTCCCAACACCTGCCCTGAGACCCTCGTGCTGCTCCCAGCAAACCGGCTCAGCTCAGTCTCAGCCTCACctctctctctctgtctctttctTCAGC-TTTAAAAACATGTTATTATTTCCAACTTAGGGCAGCGTTGCCAGGTAAGgagtagggaggagaacagagagg i cebCap1.NW_016107827v1 C 0 I 654 s aotNan1.NW_018513311v1 196115 279 + 287728 CGTAACGGGGAAGACCCTGGGGCTTCCGGGGTG---C-GTCCTCCACCAAAACCACAGCACCCC-AGACCCGTGATTGGGTGAGCTCAGAAGGTCAAGTCACGCCTTCGGGAAGAGTCTTCCCAACACCTGCCCCGAGACCCTCGTGCTGCTCCCAGCAAACCGGCTCAGCTCAATCCCAGCCTCGC--CTCTCTCTGTGTCTCATTCTTCAGC-TTTAAAAACATGTTATTATTTCCAACTTAGGGCATCGTTGCTACGTAAGgagtagggaggagaacagagagg i aotNan1.NW_018513311v1 C 0 C 0 a score=569851.000000 s hg38.chr2_KI270774v1_alt 202744 76 + 223625 gataggaagaaagagagacagagacagcagagagagaCACGGGAGGG-GAGagaacccagcacggtgtggcacacag s panTro5.chr2A 110013195 72 - 111504155 ga----aaggaagagagacagagacagcggagagagaCACGGGAGGG-GAGagaacccagcacggtgtggcacacag i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1434167 72 + 114371477 ga----aaggaagagagacagagacagcggagagagaCACGGGAGGG-GAGagaacccagcacggtgtggcacacag i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1462097 76 + 1464242 gaaaggaagaaagagagacagagacagcggagagagacacgggaggg-gagagaACGcagcacggtgtggcacacag i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1191236 75 + 81552678 AA-AGGGAGAAAGAGAGACGGAGACAGCGGAGAGAGACATGGGAGGG-GGGAGATCCCAGCACGGTGTGGCCCACGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 9290 76 + 10392 GAAAGGGAGAAAGAGAGATGGAGACAGCGGAGAGAGACGTGGGAGGG-GAGAGAACGCAGCACAGTGTGACACACGG i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 9330 76 - 11164 gaaagggagaaagagagatggagacagcggagagacacgtgggaggg-gagagAACGCAGCACAGTGTGACACACGG i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1511601 76 + 3644372 GAAAGGGAGAAAGAGAGATGGAGACAGCGGAGAGAGACGTGGGAGGG-GAGAGAACGCAGCACAGTGTGACACACGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1472590 76 - 10304083 gaaagggagaaagagagacggagacagcggagagagacgtgggaggg-gagagaACGCAGCACAGTGTGGCACACGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1546826 76 - 107702431 GAAAGGGAGAAAGAGAGACGGAGACAGCGGAGAGAGACGTGGGAGGG-GAAAGAACACAGCACAGCGTGGCACACGG i chlSab2.chr14 C 0 I 64 s manLeu1.NW_012103754v1 1044324 76 - 2200435 gaaagggagaaagagagacggagacagcagagagagacgtgggaggg-gagagaACGCAGCACAGTGTGGCACACGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1464012 76 - 13651311 gaaagggagaaagagagacggagacagcagagagagacATGGGAGGG-GAGAGAACGCAGCACAGCGTGGCACACGG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1453383 76 - 108792865 gaaaatgagagggagagccagagacagtggagagagacatgggagggagagagaACCCAGCGCAGCGTGGCA-ACAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1282265 77 - 7082604 gaacatgagagggagagacagagagagtggagagagatgtgggagggagtgagaACCCGGCGCAGTGTGGCACCCAG i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 196394 77 + 287728 gaaaatgagagggagagacggacgcagcggagagagacacgggagggagcgagaACCCGGCGCAGTGTGGCACGCAG i aotNan1.NW_018513311v1 C 0 C 0 e cebCap1.NW_016107827v1 1377382 654 + 1864846 I a score=46663.000000 s hg38.chr2_KI270774v1_alt 202820 10 + 223625 caggtgctca s panTro5.chr2A 110013267 10 - 111504155 caggtgctga i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1434239 10 + 114371477 caggtgctga i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1462173 10 + 1464242 caggtgctca i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1191311 10 + 81552678 CAGGTGCCCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 9366 10 + 10392 AGGGAGTTCA i rheMac8.chrUn_NW_015009285v1 C 0 I 11 s macFas5.chrUn_KE146933 9406 10 - 11164 AGGGAGTTCA i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1511677 10 + 3644372 AGGGAGTTCA i macNem1.NW_012011978v1 C 0 I 11 s cerAty1.NW_012000820v1 1472666 10 - 10304083 AGGGAGTTCA i cerAty1.NW_012000820v1 C 0 I 11 s manLeu1.NW_012103754v1 1044400 10 - 2200435 AGGGAGTTCA i manLeu1.NW_012103754v1 C 0 I 11 s colAng1.NW_012118821v1 1464088 10 - 13651311 AGGGTGCTCA i colAng1.NW_012118821v1 C 0 I 11 s calJac3.chr14 1453459 10 - 108792865 CAGGTGCTCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1282342 10 - 7082604 CAGGTGCTCA i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 196471 10 + 287728 CGGGCGCCCA i aotNan1.NW_018513311v1 C 0 C 0 e cebCap1.NW_016107827v1 1377382 654 + 1864846 I e chlSab2.chr14 1546902 64 - 107702431 I a score=15690.000000 s hg38.chr2_KI270774v1_alt 202830 13 + 223625 gcaaaCAC--GTTTC s panTro5.chr2A 110013277 13 - 111504155 gcaaaCAC--GTTTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1434249 13 + 114371477 gcaaaCAC--GTTTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1462183 13 + 1464242 gcaaaCAC--ATTTC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1191321 13 + 81552678 GCAAACAT--GCTTC i nomLeu3.chr19 C 0 C 0 s macFas5.chrUn_KE146933 9416 11 - 11164 -CTAGCAG--GGTG- i macFas5.chrUn_KE146933 C 0 C 0 s calJac3.chr14 1453469 15 - 108792865 GCAAACACGAGCTTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1282352 15 - 7082604 CCAAACACGAGCTTC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 196481 15 + 287728 GCAGACACGAGCGTC i aotNan1.NW_018513311v1 C 0 C 0 e cebCap1.NW_016107827v1 1377382 654 + 1864846 I e colAng1.NW_012118821v1 1464098 11 - 13651311 I e manLeu1.NW_012103754v1 1044410 11 - 2200435 I e chlSab2.chr14 1546902 64 - 107702431 I e cerAty1.NW_012000820v1 1472676 11 - 10304083 I e macNem1.NW_012011978v1 1511687 11 + 3644372 I e rheMac8.chrUn_NW_015009285v1 9376 11 + 10392 I a score=2800.000000 s hg38.chr2_KI270774v1_alt 202843 1 + 223625 C s panTro5.chr2A 110013290 1 - 111504155 C i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1434262 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1462196 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1191334 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s calJac3.chr14 1453484 1 - 108792865 C i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1282367 1 - 7082604 C i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 196496 1 + 287728 C i aotNan1.NW_018513311v1 C 0 C 0 e cebCap1.NW_016107827v1 1377382 654 + 1864846 I e colAng1.NW_012118821v1 1464098 11 - 13651311 I e manLeu1.NW_012103754v1 1044410 11 - 2200435 I e chlSab2.chr14 1546902 64 - 107702431 I e cerAty1.NW_012000820v1 1472676 11 - 10304083 I e macNem1.NW_012011978v1 1511687 11 + 3644372 I e macFas5.chrUn_KE146933 9427 0 - 11164 C e rheMac8.chrUn_NW_015009285v1 9376 11 + 10392 I a score=8281.000000 s hg38.chr2_KI270774v1_alt 202844 1 + 223625 T s panTro5.chr2A 110013291 1 - 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1434263 1 + 114371477 T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1462197 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1191335 1 + 81552678 T i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 9387 1 + 10392 T i rheMac8.chrUn_NW_015009285v1 I 11 C 0 s macFas5.chrUn_KE146933 9427 1 - 11164 T i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1511698 1 + 3644372 T i macNem1.NW_012011978v1 I 11 C 0 s cerAty1.NW_012000820v1 1472687 1 - 10304083 T i cerAty1.NW_012000820v1 I 11 C 0 s manLeu1.NW_012103754v1 1044421 1 - 2200435 T i manLeu1.NW_012103754v1 I 11 C 0 s colAng1.NW_012118821v1 1464109 1 - 13651311 T i colAng1.NW_012118821v1 I 11 C 0 s calJac3.chr14 1453485 1 - 108792865 T i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1282368 1 - 7082604 T i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 196497 1 + 287728 T i aotNan1.NW_018513311v1 C 0 C 0 e cebCap1.NW_016107827v1 1377382 654 + 1864846 I e chlSab2.chr14 1546902 64 - 107702431 I a score=66292.000000 s hg38.chr2_KI270774v1_alt 202845 12 + 223625 CTCCTAGTG-----------------------------------------------------------------------AGA s panTro5.chr2A 110013292 12 - 111504155 CTCCTAATG-----------------------------------------------------------------------AGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1434264 12 + 114371477 CTCCTAATG-----------------------------------------------------------------------AGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1462198 12 + 1464242 CTCCTAGTG-----------------------------------------------------------------------AGA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1191336 12 + 81552678 CTCCTAGTG-----------------------------------------------------------------------AGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 9388 12 + 10392 CTCCTAGTG-----------------------------------------------------------------------AGA i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 9428 12 - 11164 CTCCTAGTG-----------------------------------------------------------------------AGA i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1511699 12 + 3644372 CTCCTAGTG-----------------------------------------------------------------------AGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1472688 12 - 10304083 CTCCTAGTG-----------------------------------------------------------------------AGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1546966 12 - 107702431 CTCCTAGTG-----------------------------------------------------------------------AGA i chlSab2.chr14 I 64 C 0 s manLeu1.NW_012103754v1 1044422 12 - 2200435 CTCCTAGTG-----------------------------------------------------------------------AGA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1464110 12 - 13651311 CTCCTAGTG-----------------------------------------------------------------------AGA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1453486 12 - 108792865 CTCCTAATG-----------------------------------------------------------------------GAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1282369 83 - 7082604 CTCCTCATGGAGGGAGTGAGAACCCGGCACAGTGTGGCACCCGGCAGGTGCTCAGCACACACGAGCTTCCTCTCCCAACAGAA i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 196498 12 + 287728 CTCCTAATG-----------------------------------------------------------------------GAA i aotNan1.NW_018513311v1 C 0 C 0 e cebCap1.NW_016107827v1 1377382 654 + 1864846 I a score=2324771.000000 s hg38.chr2_KI270774v1_alt 202857 249 + 223625 CAAAGGTGTTTGCTTCTCTACT---CTCCTCGTTTTCTACCCACCCTGCTGTCTGGGGTCTCACACTGTATGTTTTGGTGTGATTGTTATTAATGTGACAAATTGTTGATATATTTTCACTGCAAATCTACGATTCGGAGTTAACTCCATGAAACCAACTCCTCCATCAACTTTCTTGACACTGCATTTAAAATACCTCCACGGTATTATGCTTGTTTTATTGCATTGAAATTGTTTTCACCAAGTTGAATT s panTro5.chr2A 110013304 252 - 111504155 CAAAGGTGTTTGCTTCTCTACTTTCCTCCTCGTTTTCTACCCACCCTGCTGTCTGGGGTCTCACACTGTATGTTTTGGTGTGATTATTATTAATGTGACAAATTGTTAATATATTTTCATGGCAAATCTATGATTCAGAGTTAACTCCATCAAACCAACTCCTCCGTCAACTTTCTTGACACTGCATTTAAAACACCTCCACGGTATTATGCTTGTTTTATTGCATTGAAATTGTTTTCACCAAGTTGAATT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1434276 252 + 114371477 CAAAGGTGTTTGCTTCTCTACTTTCCTCCTCGTTTTCTACCCACCCTGCTGTCTGGGGTCTCACACTGTATGTTTTGGTGTGATTATTATTAATGTGACAAATTGTTAATATATTTTCATGGCAAATCTATGATTCAGAGTTAACTCCATCAAACCAACTCCTCCGTCAACTTTCTTGACACTGCATTTAAAACACCTCCACGGTATTATGCTTGTTTTATTGCATTGAAATTGTTTTCACCAAGTTGAATT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1462210 252 + 1464242 CAAAGGTGTTTGCTTCTCTACCCTCCTCCTCATTTTCTACCCACCCTGCTGTCTGGGGTCTCACACTGTATGTTTTGGTGTGATTATTATTAATGTGACAAATTGttgatacattttcactgcaaatctatgattcagagttaactccatcaaaccaactccttcgtcaactttcttgacactgcatttaaaatacctccacggtattatgcttgttttattgcattgaaattgttttcaccaggttgaatt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1191348 252 + 81552678 CAAAGGTGTTTGCTTCTCTACTCGCCTCCTCATTTTCTACCCACCCTGCTGTCTGGGGTCTAACACTGTATGTTTTGGTGTGATTCTTATTAATGTGACAAATTGTTAATATATTTTCACTGCAAATCTATGATTCAGAGTTAACTCCATCAAACCAACTCCTTCATCAACTTTCTTGACACTGCATTTAAAATACCTCCAAGGTATTATGCTTGTTTTATTGCATTGAAATTGTTTTCACCAAGTTGAATT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 9400 252 + 10392 CAAAGGTGTTTGCTTCTCTCCTCTCCTCCTCATTGTCTACCCACCCAGCTGTCTGGGGTCTAACACTGTACGTTTTGGTGTGGTTATTAACAACGTGACAAATTGCTAATATATTTTCACTGCAAATCTGTGATTCAGAGTTAACTCCAGCAAACCTATTCCTTCATCAACTTTCTTGACACCGCATTTAAAATACCTCCCAGGTATTGTACATGTTTTATTGCGTTGAAATTGTTTTCACCAAGTTGAATT i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 9440 252 - 11164 CAAAGGTGTTTGCTTCTCTCCTCTCCTCCTCATTGTCTACCCACCCAGCTGTCTGGGGTCTAACACTGTACGTTTTGGTGTGATTATTAACAACGTGACAAATTGCTAATATATTTTCACTGCAAATCTGTGATTCAGAGTTAACTCCAGCAAACCTATTCCTTCATCAACTTTCTTGACACCGCATTTAAAATACCTCCAAGGTATTATACATGTTTTATTGCGTTGAAATTGTTTTCACCAAGTTGAATT i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1511711 252 + 3644372 CAAAGGTGTTTGCTTCTCTCCTCTCCTCCTCATTGTCTACCCACCCAGCTGTCTGGGGTCTAACACTGTACGTTTTGGTGTGATTATTAACAACGTGACAAATTGCtaatatattttcactgcaaatctgtgattcagagttaactccagcaaacctattccttcatcaactttcttgacaccgcatttaaaatacctccaaggtattatacatgttttattgcgttgaaattgttttcaCCAAGTTGAATT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1472700 252 - 10304083 CAAAGGTGTTTGCTTCTCTCCTCTCCTCCTCATTGTCTTCCCACCCAGCTGTCTGGGGTCTAACACTGTACGTTTTGGTGTGATTATTAACAACGTGACAAATTGCtaatatattttcactgcaaatctgtgattcagtgttaactccagcaaacctattcctccatcaactttcttgacaccgcatttaaaatacctccaaggtattatatatgttttattgcgttgaaattgttttcaccaagttgaatt i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1546978 252 - 107702431 CAAAGGTGTTTGCTTCTCTCCTCTCCTCCTCATTTTCTACCCACCCAGCTGTCTAGGGTCTAACACTGTACGTTTTGGTGTGATTATTAACAACGTGACAAATTGCTAATATATTTTCACTGCAAATCTGTGATTCAGAGTTAACTCCAGCAAACCGACTCCTTCATCTGCTTTCTTGACACTGCATTTAAAATACCTCCAAGGTATTATACATGTTTTATTGCGTTGAAATTGTTTTCACCAAGTTGAATT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1044434 252 - 2200435 CAAAGGTGTTTGCTTCTCTCCTCTCCTCCTCATTGTCTACCCACCCAGCTGTCTGGGGTCTAACACTGTACGTTTTGGTGTGATTATTAACAACGTGACAAATTGCtaatacattttcactgcaaatctgtgattcagagttaactccagcaaacctattccttcatcaactttcttgacaccgcatttaaaatacctccaaggtattatatatgttttattgcgttgaaattgttttcaccaagttgaatt i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1464122 252 - 13651311 CAAAGGTGTTTGCTTCTCTCTTCTCCTCCTCATTTTCTACCCACCCAGCTGTCTGGGCTCTAACACTGTATGTTTTGGTGTGATTATTAACAATGTGACAAATTGCTAATATATTTTCACTGCAAATCTGTGATTTAGAGTTAACTCCAGCAAACCGACTCCTTCATCAACTTTCTTGACACTGCATTTAAAATACCTCCGAGGTATTATACATGTTTTATTGCGTTGAAATTGTTTTCACCAAGTTGAATT i colAng1.NW_012118821v1 C 0 I 301 s calJac3.chr14 1453498 247 - 108792865 CAAAG-TGTTTGCTTCTCTACTCTCCTCCGTATTTTCTACCCACCCTGCTGTTTGGGGTCTAACAGTGTATGTTTGGGTGTGATTATTATTAATGTGATAAATTATTAATGCATTTTCACTGCAACTCTATGATTCAGAGTTAACTCCATCAAGCCAACTCCTTCATCGCC----TTGACACTGCATTTAAAATACCTCCAAGGTATTTTACACTTTTTATTGCATTGAAATTATTTTCGTCAAGTTGAATT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1282452 246 - 7082604 CAGAGCTGTTTGCTTCTCTCCTCTCCTCCCTATCTTCTACCTGCCCTGTTGTTTGGGGTCTAACACTG--TGTTTGGGTGTGGTTATTATTAATGTGATAAATTATTAATGTATTTTCACTGCAGCTCTGTGATTCAGAGTTAACTCCATCAAGCCAACTCCTTCATCACC----TTGACACTGCGTTTAAAATACCTCCAAGGTATTTTGCACTTTTTATTGCATTGAAATTATTTCCATCAGGTTGAATC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1378036 248 + 1864846 CAAAGCTGTTTGCTTCTCTCCTCCCCTCCCTATTTTCTACCCGCCCTGCTGTTTGGGGTCTAACACTGTATGTTTGGGTGTGATTATTATTAATGTGATGAATTATTAATGTATTTTCACTGCAACTCTATGATTCAGAGTTAACTCCATCAAGCCAACTCCTTCATCTCC----TTGACACTGCGTTTAAAATACCTCCAAGGTATTTTACACTTTTTATTGCATTGAAATTATTTTCATCAAGTTGAATT i cebCap1.NW_016107827v1 I 654 C 0 s aotNan1.NW_018513311v1 196510 246 + 287728 CAAAG-TGTTTGCTTCTCTGCTCTGCCCCCCGTTTTCTACCCACCCTGCTGTTTGGGGTCTGACACTGTATCTTTGGGTGTGATTATTATTAATGTGATAAATTATTAATGTATTTTCACTGCAACTCTATGATTCAGAGTTAACTCCATCAAGCCAACTCCTTCATCGCC-----TGACACTGCATTTAAAATACCTCCAAGGTAGTTTACACTTTTTATTGCATTGAAATCATTTTCGTCAAGTTGAATT i aotNan1.NW_018513311v1 C 0 C 0 a score=159382.000000 s hg38.chr2_KI270774v1_alt 203106 16 + 223625 CTTTCTGTGCAAACTT s panTro5.chr2A 110013556 16 - 111504155 CTTTCTGTGCAAACTT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1434528 16 + 114371477 CTTTCTGTGCAAACTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1462462 16 + 1464242 ctttctgtgcaaactt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1191600 16 + 81552678 CTTTCTGTGCAAACTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 9652 16 + 10392 CTTTCTGTGCAAACTT i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 9692 16 - 11164 CTTTCTGTGCAAACTT i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1511963 16 + 3644372 CTTTCTGTGCAAACTT i macNem1.NW_012011978v1 C 0 I 113 s cerAty1.NW_012000820v1 1472952 14 - 10304083 ctttctgtgcaaac-- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1547230 16 - 107702431 CTTTCTGTGCAAACTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1044686 14 - 2200435 ctttctgtgcagac-- i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1464675 16 - 13651311 CTTTCTGTGCAAACTT i colAng1.NW_012118821v1 I 301 C 0 s calJac3.chr14 1453745 16 - 108792865 CTTTCTGTGCGAACTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1282698 16 - 7082604 CTTTCTGTGCAAACTT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1378284 16 + 1864846 CTTTCTGTGCAAACTT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 196756 16 + 287728 CTTTCTGTGCAAACTT i aotNan1.NW_018513311v1 C 0 C 0 a score=4423.000000 s hg38.chr2_KI270774v1_alt 203122 1 + 223625 T s panTro5.chr2A 110013572 1 - 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1434544 1 + 114371477 T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1462478 1 + 1464242 t i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1191616 1 + 81552678 T i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 9668 1 + 10392 C i rheMac8.chrUn_NW_015009285v1 C 0 I 28 s macFas5.chrUn_KE146933 9708 1 - 11164 C i macFas5.chrUn_KE146933 C 0 I 28 s chlSab2.chr14 1547246 1 - 107702431 T i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1464691 1 - 13651311 T i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1453761 1 - 108792865 T i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1282714 1 - 7082604 T i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1378300 1 + 1864846 T i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 196772 1 + 287728 T i aotNan1.NW_018513311v1 C 0 C 0 e manLeu1.NW_012103754v1 1044700 0 - 2200435 C e cerAty1.NW_012000820v1 1472966 0 - 10304083 C e macNem1.NW_012011978v1 1511979 113 + 3644372 I a score=1118809.000000 s hg38.chr2_KI270774v1_alt 203123 131 + 223625 TACACTAAAAATTCATTCCTCAAATCAGTTCTTTGGTCCATGTCAGTTTTGCCAATTAGACCTTTCGCCATGGAGGTGTTTTCCTTTGTGTTATGATTTCTTCAGATCCGGCTTTCTTAGCTCAGCATTTT s panTro5.chr2A 110013573 131 - 111504155 TACACTAAAAattcattcctcaaatcagttctttggtccatgtcagttttgccagttagacctttcgccatggaggcgttttcctttgtggtatgatttcttcagatccggctttcttagctcagcatttt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1434545 131 + 114371477 TACACTAAAAattcattcctcaaatcagttctttggtccatgtcagttttgccaattagacctttcgccatggaggcgttttcctttgtggtatgatttcttcagatccggctttcttagctcagcatttt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1462479 131 + 1464242 tacactaaaaattcattcctcaaatcagttctttggtccatgtcagttttgccaattagacctttcgccatggaggcgttttcctttgtggtatgatttcttcagatctggctttcttagctcagcatttt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1191617 130 + 81552678 TACGCTAAAAATTCATTCCTCTAATCAGTTCTTTGGTCCATGTCACTTTTGCCGATTAGACCTTTCGCCAT-GAGGCGTTTTCCTTTGTGGTATGAATTCTTCAGGTCTGGCTTTCTTAGCTCAGCATTTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 9697 131 + 10392 TACGCTAAAAATTCGTTCACCAGATCCGTTCTTTGGTCTCCGTCagttttgccaattagacctttcgccatggaggcgttttcctctgtggtacgatttcttcaggcccagctttcatagctcagcatttt i rheMac8.chrUn_NW_015009285v1 I 28 C 0 s macFas5.chrUn_KE146933 9737 131 - 11164 TACACTAAAAATTCATTCACCAGATCCGTTCTTTGGTCTCCGTCAGTTTTGCCAATTAGACCTTTCGCCATGGAGGCGTTTTCCTCTGTGGTACGATTTCTTCAGGCCCAGCTTTCATAGCTCAGCATTTT i macFas5.chrUn_KE146933 I 28 C 0 s macNem1.NW_012011978v1 1512092 131 + 3644372 TACACTAAAAattcattcaccagatccgttatttggtctccgtcagttttgccaattagacctttcgccatggaggcgttttcctctgtggtacgatttcttcaggcccagctttcatagctcagcatttt i macNem1.NW_012011978v1 I 113 C 0 s cerAty1.NW_012000820v1 1472966 120 - 10304083 -----------ttcattcaccagatccgttcttgggtctccgtcagttttgccaattcgaccttttgccgtggaggcgttttcctctgtggtacgatttcttcaggcccagctttcatagctcagcatttt i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1547247 131 - 107702431 TACACTAAAAATTCATTCACCAGATCCGTTTTTTGGTCTCCGTCAGTTTTGCCAATTAGACCTTTCGCCGTGGAGGCATTTTCCTCTGTGGTACGATTTCTTCAGGCCCAGCTTTCTTAGCTCAGCATTTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1044700 120 - 2200435 -----------ttcattcaccagatccgttcttgggtctccgtcagttttgccaattagacctttcgccgtggaggcgttttcctctgtggtacgatttcttcaggcccagctttcatagctcagcatttt i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1464692 131 - 13651311 TACACTAAAAATTCGTTCACCAGATCAGTtctttggtctccatcagttttgccaattagacctttcgccgtggaggtgttttcctctgtggtatgatttcttcaggcccagctttcttagctcagcatttt i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1453762 130 - 108792865 TACACTAAAAACGCATCCACCAG-TCAGTTCTTTGGTCCATGTCAGTTTTGCCAATTAGACCTCTTGCTGTGGAGGGGTTTTGCCTTGTGCTGTGATTCCTTCATGTCCAGCTTTCTCAGCTCAGCAGTTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1282715 128 - 7082604 TACACTAAAAACGCATCCACCGG-TCAGTTCTTTGGTTCACGTCAGTTTTGCCGATTAGATCTTCTGCTGTGGGGGCGTTTT-CCCTGTGGTATGATTCC-TCGGGTCCAGCTTTCTTAGCTCAGCGTTTC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1378301 130 + 1864846 TACACTAAAAACGCATCCACTGG-TCAGTTCTTTGGTTCATGTCAGTTTTGCCAATTAGTCCTTTTGCCGTGGAGGCATTTTGCTTTGTGGTATGATTCCTCCAGGTCCAGCTTTCTTAGCTCAGCATTTC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 196773 130 + 287728 TACACTAAAAACGCCTCCACCAG-TCGGTTCTTTGGTCCATGTCAGTTGTGCCGATTAGACCTTTTGCCGTGGAGGCGTTTTCCCGTGTGGTGTGATTCCTTCAGGTCCAGCTTTCTCAGCTCAGCATTTT i aotNan1.NW_018513311v1 C 0 I 125 a score=857121.000000 s hg38.chr2_KI270774v1_alt 203254 127 + 223625 AAACTTAAATTTCATGAAGACTTTGTCTGTCTGTTGATTCTTACT-GTCCAGGGAAGATGCTAA-ATGTGCAGTTCCAGTCCTTTCTCCATTCGCTCTTGTTTTTATTATTTTTACCAATTCTACTTTT s panTro5.chr2A 110013704 126 - 111504155 aaacttaaatttcatgaagactttgtctgtctgttgattcttact-gtccagggaagatgctaa-atgtgcagttccagtcc-ttctccattcgctcttatttttattatttttaccaactctactttt i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1434676 126 + 114371477 aaacttaaatttcatgaagactttgtctgtctgttgattcttact-gtccagggaagatgctaa-atgtgcagttccagtcc-ttctccattcgctcttatttttattatttttaccaactctactttt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1462610 126 + 1464242 aaacttaaatttcatgaagactttgtctgtctgttgattcttact-atccagggaagatgctaa-atgtgcagttccagtcc-ttctccattcactcttatttttattatttttaccaactctactttt i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1191747 118 + 81552678 AAACTTAAATTTCAGGAAGACTT--------TGTTGATTCTTACT-GTCCAGGGAAAATGCTAA-ATGTGCAGTTCCAGTCC-TTCTCCATTCGCTCTTATTTTTATTATTTTTACCAACTCTACTTTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 9828 117 + 10392 aaacttaaatttcatgaggactttatctgtctgttgattcttact-gtccagggaaaatgttaa-acgtgcagttccagtcc-ttctccatttgctc---------ttatttttaacaactctactttt i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 9868 117 - 11164 AAACTTAAATTTCATGAGGACTTTATCTGTCTGTTGATTCTTACT-GTCCAGGGAAAATGTTAA-ACGTGCAGTTCCAGTCC-TTCTCCATTTGCTC---------TTATTTTTAACAACTCTACTTTT i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1512223 117 + 3644372 aaacttaaatttcatgaggactttatctctctgttgattcttact-gtccagggaaaatgttaa-acgtgcagttccagtcc-ttctccatttgctc---------ttatttttaacaactctactttt i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1473086 117 - 10304083 aaacttaaatttcatgaggactttatctgtctgttgattcttact-gtccagggaaaacgttaa-acgtgcagttccagtcc-ttctccatttgctc---------ttatttttaccaactctactttt i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1547378 117 - 107702431 AAACTTAACTTTCATGAAGAGTTTATCTGTCTGTTGATTCTCACT-GTCCAGGGAAAATGTTAA-ACGTGCAGTTCCAGTCC-TTCTCCATTTGCTC---------TTATTTTTACCAACTCTACTTTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1044820 117 - 2200435 aaacttaaatttcatgaggactttatctgtctgttgattcttact-gtccagggaaaatgttaa-acgtgcagttccagtcc-ttctccatttgctc---------ttatttttaccaactctactttt i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1464823 117 - 13651311 aaacttaaatttcatgaagactttatctgtctgttgattcttact-gtccagggaaaatgttag-atgtacagttccagtcc-ttctccatttgctc---------ttattttcaccaactctactttt i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1453892 125 - 108792865 ACACGCAAGTTTCGTGGAGACCGTGTCTGTCTGTTGATTCTTACTGGTCC-AGGAAAACATTAACACCTGCAGTTTCACCCC-TTCTCCATCTGCTCTTACGTTTATCATTTT--CCAGCTCTGCTTGT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1282843 127 - 7082604 ACACGGAAGTTTCGTGGAGACCGTGTCTGTCTGTTGATTCTCACTGGTCTGGGGAAAATGCTAACACCTGCAGTTTCACCCC-TTCTCCGTTTGCTCTTTCTTTTGCCATTTTTCCCAGCTCC-CTTGT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1378431 127 + 1864846 ACATGCAAGTTTCGTGGAGACCGTGTCTGTCTGTTGATTCT-ACTGGTCCGGGGAAAACGTTAACACCTGCAGCTTCACCCC-TTTTCCATTTGCTCTTAGTCCTGTCATTTTTCCCAGCTCTACTTGT i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 196903 125 + 287728 I a score=292327.000000 s hg38.chr2_KI270774v1_alt 203381 30 + 223625 CCACCATCACTTAGTTCTGCAATTTCTGAA s panTro5.chr2A 110013830 30 - 111504155 ccaccatcacttagttctgcgatttctgaa i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1434802 30 + 114371477 ccaccatcacttagttctgcgatttctgaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1462736 29 + 1464242 -caccatcacttagttctgcgatttctgaa i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1191865 30 + 81552678 CCACCATCACTTAGCTCTGCAATTTCTGAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 9945 30 + 10392 ccaccatcacttagttctgtgacttctgaa i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 9985 30 - 11164 CCACCATCACTTAGTTCTGTGACTTCTGAA i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1512340 30 + 3644372 ccaccatcacttagttctgtgacttctgaa i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1473203 30 - 10304083 ccaccatcacttagttctgtgacttctgaa i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1547495 30 - 107702431 CCACCATCACTTAGTTCTATGACTTCTGAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1044937 30 - 2200435 ccaccatcacttagttctgtaacttctgaa i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1464940 30 - 13651311 ccaccatcacttagttctgtgacttctgaa i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1454017 30 - 108792865 CCACCGTCACTTAGTTCTGTGATGTCTGAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1282970 30 - 7082604 CCACCATCACGTAGTTCTGCGATGTCTGAA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1378558 30 + 1864846 CCACCATCACGTAGCTCTGCGATGTGTGAA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 197028 30 + 287728 CCACCATCACTTAGTTCTGCGATGTCTGAA i aotNan1.NW_018513311v1 I 125 I 36 a score=283937.000000 s hg38.chr2_KI270774v1_alt 203411 46 + 223625 ATACAATTTTTCAGGTTTTCCTTGTCGTTGATAAACGGTGCCCTAT s panTro5.chr2A 110013860 46 - 111504155 atacaatttttcaggttttccttgtcgctgataaacggtgccctat i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1434832 46 + 114371477 atacaatttttcaggttttccttgtcgctgataaacggtgccctat i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1462765 46 + 1464242 atacaatttttcaggttttccttgtcgctgataaatggtgccctat i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1191895 45 + 81552678 ATACAATTTTTCAGGTTTT-CTTGTCACTGGTAAACGGTGCCCTAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 9975 44 + 10392 at--agtttttcaggttttctttgtctctggtaaactgtgccctat i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 10015 44 - 11164 AT--AGTTTTTCAGGTTTTCTTTGTCTCTGGTAAACTGTGCCCTAT i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1512370 44 + 3644372 at--agtttttcaggttttctttgtctctggtaaactgtgccctat i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1473233 44 - 10304083 at--agtttttcaggttttctttgtctctggtaaactgtgccctat i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1547525 46 - 107702431 ATACAGTTTTTCAGGTTTTCTTTGTCTCTGGTAAACTGTGCCCTAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1044967 44 - 2200435 at--agtttttcaggttttctttgtctctggtaaactgtgccctat i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1464970 46 - 13651311 atacagtttttcaggttttctttgtctctggtaaactgtgccctat i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1454047 41 - 108792865 ATACAGTTGTTGAGGT----TTTGTCTGTGGTAAGCGGTGCCCTG- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1283000 45 - 7082604 ATAGAATCTCTGAGGTTTTCTTTGTCTGTGGTAACCTGTGCCCGG- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1378588 44 + 1864846 ATACAATTGCTGGGGT-TTCCTTGTCTGTGGTAACCTGTGCGCTG- i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 197058 36 + 287728 I a score=1176785.000000 s hg38.chr2_KI270774v1_alt 203457 125 + 223625 ACCTTTTTGCTGTTTTCAGTTGTATTTTGTATTGATATTCCTACCTATGGTATGCATTATAAATTCAAGAAAGTTTGAATCATTTGCATTAATTTCCAGCAAATCCATGGGAAAGCCGCGAGGTC s panTro5.chr2A 110013906 125 - 111504155 acctttttgctgttttcagttgtattttatattgatattcctacctacagtatgcattttaaattcaagaaagtttgaatcatttgcattaatttccagcaaatccatgggaaagccgcgaggtc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1434878 125 + 114371477 acctttttgctgttttcagttgtattttatattgatattcctacctacagtatgcattttaaattcaagaaagtttgaatcatttgcattaatttccagcaaatccatgggaaagccgcgaggtc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1462811 125 + 1464242 acctttttgctgttttcaattgtattttgtattgatattcctacctacggtatgcattataaattcaagaaagtttgaatcatttgcattaatttccagcaaatccatgggaaagccgcgaagtc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1191940 125 + 81552678 CCCTTTTTGCTGTTTTCCGTTGTATTTTGTATTGATATTCCTACTTACGGCATGCATTACAAATTCAAGAAAGGTTGAATCATTTGCATTAATTTCCAGCAAATCCATGGGAAAGCCACGAGGTC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 10019 125 + 10392 atctttttgctgttttcagttgtatcttgtattgatatccctacttacagtgtgcattataaattcaaaaaaggttgaatcatttgcattaatttccagcaaatccatgggaaagccgtgaggtc i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 10059 125 - 11164 ATCTTTTTGCTGTTTTCAGTTGTATCTTGTATTGATATCCCTACTTACAGTGTGCATTATAAATTCAAAAAAGGTTGAATCATTTGCATTAATTTCCAGCAAATCCATGGGAAAGCCGCGAGGTC i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1512414 125 + 3644372 atctttttgctgttttcagttgtatcttgtattgatatccctacttacagtgtgcattataaattcaaaaaaggttgaatcatttgcattaatttccagcaaatccatgggaaagccgcgaggtc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1473277 125 - 10304083 atctttttgctgttttcagttgtatcttgtattgatatccctacttacagtgtgcattataaattcaaaaaaggttgaatcatttgcattaatttccagcaaatccatgggaaagccgcgaggtc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1547571 125 - 107702431 ATCTTTCTGCTGTTTTCAGTTGTATCTTGTATTGATATCCCTACTTACAGTGTGCATTATACATTCAAAAAAGGTTGAATCATTTGCATTAATTTCCAGCAAATCCATGGGAAAGCCGCGAGGTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1045011 125 - 2200435 atctttttgctgttttcagttgtatcttgtattgatatccctacttacagtgtgcattataaattcaaaaaaggttgaatcatttgcattaatttccagcaaatccatgggaaagccgcgaggtc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1465016 125 - 13651311 atctttttgctgttttcagttgtatcttgtattgatatccctacttacagtgtgcattataaattcaaaaaaggttgaatcatttgcattaatttccagcaaatccatgggaaagctgcgaggtc i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1454088 125 - 108792865 ACCTCTGTGCTGTTTCCAGCTGTATTTTGTATTGATATTCCCACTAGGAGTGTGCATTATAAACTCGAGAAACGTGGAACCACTTGCATTCGTGTCCAGTGAATCCGTGGGAGAGCTGTGaggtc i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1283045 125 - 7082604 ACCTCTTTGCTGTTTCCAGCTGTATTTTGTATTGATATTCCGACCAGGAGTGTGCATTCTAAACTCAAGAAAGGTGGAATCCCTTGCATTAATTTCCAGTGAATCTGTGGGAGAGCTGTGAGGTC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1378632 125 + 1864846 ACCTCTCTgctgtttccagctgtattttgtattgatattcctactaggagtgtgcattctaaactcaagaaaggtggaatcacttgcattaatttccagtgaatccgtgggagagctgtgagGTC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 197094 125 + 287728 ACCTCTTTGCTGTTTCCAGCTGTATTTTGTATTGATATTCCTACTAGGAGTGTGCATTATAGACTCAAGAAAGGTGGAATCACTTGCATTAATTTCCGGTGAACCCGTGGGAGAGCTGTGAGGTc i aotNan1.NW_018513311v1 I 36 C 0 a score=59402.000000 s hg38.chr2_KI270774v1_alt 203582 6 + 223625 CTTCCC s panTro5.chr2A 110014031 6 - 111504155 cttccc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1435003 6 + 114371477 cttccc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1462936 6 + 1464242 cttccc i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1192065 6 + 81552678 CTTCCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 10144 6 + 10392 cttccc i rheMac8.chrUn_NW_015009285v1 C 0 C 0 s macFas5.chrUn_KE146933 10184 6 - 11164 CTTCCC i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1512539 6 + 3644372 cttccc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1473402 6 - 10304083 cttccc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1547696 6 - 107702431 CTTCCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1045136 6 - 2200435 cttccc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1465141 6 - 13651311 cttccc i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1454213 6 - 108792865 cttccc i calJac3.chr14 C 0 I 104 s cebCap1.NW_016107827v1 1378757 6 + 1864846 CTTCCC i cebCap1.NW_016107827v1 C 0 I 56 s aotNan1.NW_018513311v1 197219 6 + 287728 ctcccc i aotNan1.NW_018513311v1 C 0 I 141 e saiBol1.JH378218 1283170 0 - 7082604 C a score=1199144.000000 s hg38.chr2_KI270774v1_alt 203588 237 + 223625 TAGGATGCAGCCAGGTTTGTCCTCCGTCCAGGACGTCTAACCCTTTGTTCCCTCCTGCACCTTCCCACGCTGTGAGCTGACG-GGTGCTGTTTCTCTAGGCACGTCACGGGGGGTTCCTGCCATCTCTCCTCTCTTTATCATTAGATTCATAAGCGTGCTGGAGGGAGGCCAGCTGGGACTAGGCC--GAGGCAGCCATGGGGCAGTGGGCCACGGGATCCCTGTAAGCCATGGGTGACC s panTro5.chr2A 110014037 237 - 111504155 taggatgcagccaggtttgtcctccatccaggGCGTCTAACCCTTTGTTCCCTCCCGCACCTTCCCACACTGTGAGCTGACG-GGTGCTCTTTCTCTAGGCACGGCGCGGGGGCTTCCTGCCATCTCTCCTCTCTTTATCATTAGATTCGCAAGCATGCTGGAGGGAGGCCAGCTGGGACTAGGCC--GAGGCAGCCATGGGGCAGTGGGCCACGGGATCCCTGTAAGCCATGGGTGACC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1435009 237 + 114371477 taggatgcagccaggtttgtcctccatccaggGCGTCTAACCCTTTGTTCCCTCCCGCACCTTCCCACACTGTGAGCTGACG-GGTGCTCTTTCTCTAGGCACGGCGCGGGGGCTTCCTGCCATCTCTCCTCTCTTTATCATTAGATTCGCAAGCATGCTGGAGGGAGGCCAGCTGGGACTAGGCC--GAGGCAGCCATGGGGCAGTGGGCCACGGGATCCCTGTAAGCCATGGGTGACC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1462942 233 + 1464242 taggatgcagccaagtttgtcctctgtccaggGCGTCTAACCCTTTGTTCCCTCC-GCACCTTCCCACACTGTGAGCTGACG-GGTGCTCTTTCTCTA-GCA-GGCGCGGGGG-TTCCTGCCATCTCTCCTCTCTTTATCATTAGATTCACAAGCATGCTGGATGGAGACCAGCTGGGACTAGGCC--GAGGCAGCCATGGGGCAGTGGGCCACGGGATCCCTGTAAGCCATGGGTGACC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1192071 237 + 81552678 TAGGATGCAGCCAGGTTTGTCCTCTGTCCAGGGCGGCTAACCCTTTGTTCCCTCCTGCACCTTCCCACACTGTGAGCTGACG-GGTGCTCTTTGACTAGGCACGGCGCGGGGGGTTCCTGCCATCTCTCCTCTCTTTATCATTAGATTCACAAGCATGCTGGATGGAGGCCAGCCGGGACTAGGCT--GAGGCAGCCATGGGGCAGTGGTCCACGGGATCCCTGTAAGCCATGGGTGACC i nomLeu3.chr19 C 0 C 0 s rheMac8.chrUn_NW_015009285v1 10150 240 + 10392 tagcatacagccaggtttgtcctctctccagggtgtctaACCCTTTGTGCACTCTCGCACCTTCCCGCACTGTGAGCTGACACGGTGCTCTTTCTCTAGGCATGGCGCTGGGGGTTCCTGCCGTCTTTCCTCTCTTTATCATTAGATTCACAAGCATGCTGGATGGAGGCCAGCCAGGACTAGGCTGAGAGGCAGCCATAGGGCAGTGGGCAGCGGGATCCCTGTAAGCCGTGGGTGACC i rheMac8.chrUn_NW_015009285v1 C 0 N 0 s macFas5.chrUn_KE146933 10190 240 - 11164 TAGCATACAGCCAGGTTTGTCCTCTCTCCAGGGTGTCTAACCCTTTGTGCCCTCTCGCACCTTCCCGCACTGTGAGCTGACACGGTGCTCTTTCTCTAGGCATGGCGCTGGGGGTTCCTGCCGTCTTTCCTCTCTTTATCATTAGATTCACAAGCATGCTGGATGGAGGCCAGCCAGGACTAGGCTGAGAGGCAGCCATAGGGCAGTGGGCAGCGGGATCCCTGTAAGCCGTGGGTGACC i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1512545 240 + 3644372 tagcatacagccaggtttgtcctctctccagggtgtctaACCCTTTGTGCCCTCTCGCACCTTCCCGCACTGTGAGCTGACACGGTGCTCTTTCTCTAGGCATGGCGCTGGGGGTTCCTGCCGTCTTTCCTCTCTTTATCATTAGATTCACAAGCATGCTGGATGGAGGCCAGCCAGGACTAGGCTGAGAGGCAGCCATAGGGCAGTGGGCAGCGGGATCCCTGTAAGCCGTGGGTGACC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1473408 240 - 10304083 tagcatatagccaggtttgtcctctctccagggtgtctaACCCTTTGTGCCCTCTCGCACCTTCCCGCATTGTGAGCTGACACGGTGCTCTTTCTCTAGGCATGGCGCTGGGGGTTCCTGCCGTCTTTCCTCTCTTTATCATTAGATTCACAAGCATGCTGGATGGAGGCCAGCCAGGACTAGGCTGAGAGGCAGCCATAGGGCAGTGGGCAGCGGGATCCCTGTAAGCCGTGGGTGACC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1547702 183 - 107702431 TAGCATACAGCCAGGTTTGTCCTCTCTCCAGGGTGTCTAACCCTTTGTGCTGTCTCGCACCTTCCCGCACTGTGAGCTGACAGGGTGCTCTTTCTCTAGGCATGGCGCTGGGGGTTCCTGCCA-CCTTCCTCTCTTTATCATTAGATTCACAAGCATGCTGGATGGAGGTCAGCCG--------------------------------------------------------GGGTGACC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1045142 240 - 2200435 tagcatatagccaggtttgtcctctctccagggtgtctaACCCTTTGTGTCCTCTCGCACCTTCCCGCACTGTGAGCTGACACGGTGCTCTTTCTCTAGGCATGGCGCTGGGGGTTCCTGCCGTCTTTCCTCTCTTTATCATTAGATTCACAAGCATGCTAGATGGAGGCCAGCCAGGACTAGGCTGAGAGGCAGCCATAGGGCAGTGGGCAGCGGGATCCCTGTAAGCCGTGGGTGACC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1465147 239 - 13651311 tagcatacagccaggtttgtcctctctcca-gCTGTCTAACCCTTTGTGCCCTCTCGCACCTGCCCACACTGTGAGCTGACAGGGTGCTCTTTCTCTAGGCATGGCGCTGCGGGTTCCTGCCATCTTTCCTCTCTTTATCATTAGATTCACAGGCATGCTGGATGGAGGCCAGCCGGGACTAGGCTGAGAGGCAGCCACGGGGCAGTGGGCAGCAGGATCCCTGTAAGCCGTGGGTGACC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283170 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I a score=2925692.000000 s hg38.chr2_KI270774v1_alt 203825 624 + 223625 GGGTGCCCTCTTCCCCCAGGACCCTCCTCCCCAGGGACCCTCCTCCCCCAGGGCCCTCTTTCCCCAGACTCTTGGGGTAGAGACGGCCTGAGTCTCTTGAGATGGAGTCTGAAGCTTCTGGTCATCTGAACTGCATGTTGATGACAGGAATTGTCTTCAGGACGTCATTAGGGAAGTCCGAGAGAACTGGCCCTTTGCTGGGGGACAGACGTAGAGTGGCCAGCCTGGGCTACACAGCATGGGGGATCCGAACCTGTTGTAGTGGAATCCTTCAGAGTCAGTACGGCGTCTGTGAGGCACTCAGGCCCCAGAGGACCTGGGGAAGGACCTGCGCTCCTTAGAGACCCACGTCTGCCCTGGAAATGAGCAGGGGGAGCTGTTCCCAGCCTGGTCACACATGAACCACAGCAAGGACAGCCTCCCAC--CCCAGTCCCCCCGTGGGTTCAGCTAAACGCA--TTGTCCAGTTTCCAGCCCAGAACCCAAGCCTGGCTGCCAGGCTCATCTGCTTTCTCTGGGCAGCTCCCAGCCCCTCCCTCTGTGGCCCCACTTTCTTCACCCACTTCTGAGCAAGTATAGGTGGGAAATGTGCCTTCCTCCCTCTCCTGACCCCAGGCTGTCTACTCC s panTro5.chr2A 110014274 626 - 111504155 TGGTGCCCTCTTCCCCCAGGACCCTCCTCCCCAGGGACCGTCCTCCCCCAGGGCCCTCTTTCCCCAGACCCTTGGGGCAGAGACAGCCTGAGTCTCTTGAGATGGAGTCTGAAGCTTCTGGTCATCTGAACTGCATGTTGATGACAGGAATTGTCTTCAGGACGTCATTAGGGAAGTCCGAGGGAACTGGCCCTTTGCTGGGGGACAGACGTAGAGTGGCCAGCCTGAGCTACACAGCATGGGGGATCCGAACCTGTTGTAGTGGAATCCCTCAGAGTCAATGCGGCGTCTGTGAGGCACTCGGGCCCCAGAGGACCTGGGGAAGGACCTGTGCTCCTTAGAGACCCACGTCCGCCCTGGAAAAGAGCAGGGGGAGCTGCTCCCAGGCTGGTCACACATGAGCCGCAGCAATGACAGCCTCCCACCTCTCAGTACCCCCGTGGCTTCAGCTAAACGCA--TTGTCCAGTTTCCAGCCCAGAACCCAAGCCTGGTTGCCAGGCTCATCTGCTTTCTCTGGGCAGCTCCCAGCCCCTCCCTCTGCAGCCCCACTTTCTTCACCCACTTCTGAGCAAGTATAGGTGGGAAATGTGCCTTCCTCCCTCTCCTGACCCCAGGCTGTCTACTCC i panTro5.chr2A C 0 n 0 s panPan2.chr2A 1435246 626 + 114371477 TGGTGCCCTCTTCCCCCAGGACCCTCCTCCCCAGGGACTGTCCTCCCCCAGGGCCCTCTTTCCCCAGACCCTTGGGGCAGAGACAGCCTGAGTCTCTTGAGATGGAGTCTGAAGCTTCTGGTCATCTGAACTGCATGTTGATGACAGGAATTGTCTTCAGGACGTCATTAGGGAAGTCCGAGGGAACTGGCCCTTTGCTGGGGGACAGACGTAGAGTGGCCAGCCTGAGCTACACAGCATGGGGGATCCGAACCTGTTGTAGTGGAATCCCTCAGAGTCAATGCGGCGTCTGTGAGGCACTCAGGCCCCAGAGGACCTGGGGAAGGACCTGTGCTCCTTAGAGACCCACGTCCGCCCTGGAAAAGAGCAGGGGGAGCTGCTCCCAGGCTGGTCACACATGAGCCGCAGCAATGACAGCCTCCCACCTCTCAGTACCCCCGTGGCTTCAGCTAAACGCA--TTGTCCAGTTTCCAGCCCAGAACCCAAGCCTGGTTGCCAGGCTCATCTGCTTTCTCTGGGCAGCTCCCAGCCCCTCCCTCTGCAGCCCCACTTTCTTCACCCACTTCTGAGCAAGTATAGGTGGGAAATGTGCCTTCCTCCCTCTCCTGACCCCAGGCTGTCTACTCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1463175 623 + 1464242 GGGTGCCCTCTTGCCCCAGGACCCTCCTCCCCAGGGACCGTCCTCCCCCAGGGCCCTCTTTCCCCAGACCCTTGGGGCAGAGACAGCCTGAGTCTCTTGAGATGGAGTCTGAAGCTTCTGGTCATCTGAACTGCATGTTGATGACAGGAATTGTCTTCAGGACGTCATTAGGGAAGTCCGAGGGAACTGGCCCTTTGCTGGGGGACAGACGTAGAGTGGCCAGCCTGGGCTACACAGCACGGGGGATCCGAACCTGTTGTAGTGGAATCCCTCAGAGTCAGTACGGCATCTGTGAGGCACTCGGGCCCCAGAGGACCT-GGGAAGGACCTGTGCTCCTTAGAGACCCACGTCCGCCCTGGAAAAGAGCAGGGGGAGCTGCTCCCAGGCGGGTCACAC--GAGCCGCAGCAATGACAGCCTCCCACCTCTCAGTCCCCCCGTGGCTTCAGCTGAACGCA--TTATCCAGTTTCCAGCCCAGAACCCAAGCCTGGCTGCCAGGCTCATCTGCTTTCTCTGGGCAGCTCCCAGCCCCTCCCTCTGCAGCTCCACTTTCTTCACCCACTTCTGAACAAGTATAGGTGGGAAATGTGCCTTCCTCCCTCTCCTGACCCCAGGCTGTCTACTCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1192308 626 + 81552678 TGGTGCCCTCTTCCCCCAGGACCCTCCTCCCCAGGGACCCTCCTCCCCCAGGGCCCTCTTTCCGCAGACCCTTGGGGCAGAGACGGCCTGAGTCTCTTGAGACGGAGTCTGAAGCTTCTGGTCATCTGAACTGCATGTTGATGACAGGAATTGTCTTCAGGACGTCATTAGGGAAGTCCAAGGGAACTGGCCCTTTGCTGGCAGACAGACGTAGAGTGGCCAGCTTGGGCTACACAGCACGGGGGGTCCGAACCTGTTGTAGTGGAATTCCTCAGAGTCAGTACGGCGTCTGTGAGGCACTTGGGCCCCAGAGGACCTGGGGAAGGACCTGTGCTCCTTAGAGACCCACGTCTGCCCTGGAAACGAGCAGGCGGAGCTGCTCCCAGGCTGGTCACATATGAGCCGCAGCAATGACAGCCTCCCACCTCTCAGTACCCCCGTGGCTTCAGCTGAACGCA--TTATCCAGTTTCCAGCCCAGAACCCAAGCCTGGCTGCCAGGCTCATCTGCTTTCTCTGGGCAGCTCCCAGCCCCTCCCTCTGCGGCCCCACTTTCTTCACCCACTTCTGAGCCAGTATAGGTGGGAAATGTGCCTTCTTCCCTCTCCTGACCCCAGGCTGTCTACCCC i nomLeu3.chr19 C 0 C 0 s macFas5.chrUn_KE146933 10430 625 - 11164 TGGTGCCCTCTTCCCCCAGGACCCTCCTCCCCAGGGACCCTCCTCCCCCAGGGCCCTCTTTCCCCAGACCCTTGGGACAGAGACAGCCTGGGTCTCTTGAGATGGCATCTGAGGTTTCTGGTCATCTCAACTGCATGTTGATGACAGGAATTGTCTTCAGGACTTCATTAGGGAAGTCTGAGGGAACTGGCCCTTTGCTGGGGGACAGATGTAGAGTGGCC-GCCTGGGCTACACGGCACGGGGGATCCGAACCTGTTGTAGTGGAATCCCTCAGAGTCAATAAGGCATCTGTGAGGCACTCAGGGCCCAGAGGACCTGGGGAAGGACCTGTGCTCCTTAGAGACCCATGTCAGCCCTGGAAACGAGCAGGGGGGGCCGCTCCCAGGCTGGTCACATGTCAGCCCCAGCAATGACAGCCTCCTACCTCCCAGTCCCCCTGTGGCTTCAGCTGAATGCG--TTATCCAGTTTCCAGCCCAGAACCCAAGCCTGGCCACCAGGCTCATCTGCTTTCTCTGGGCAGCTCCCAGCCCCTCCCTCTGTGGCTCCACTTTCTTCACCCACTTCTGAGCAAGTGTTGCTGGGAAATGTGCCTTCCTGCCTCTCCTGACCCCAGGCTGTCTACCCT i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1512785 625 + 3644372 TGGTGCCCTCTTCCCCCAGGACCCTCCTCCCCAGGGACCCTCCTCCCCCAGGGCCCTCTTTCCCCAGACCCTTGGGACAGAGACAGCCTGGGTCTCTTGAGATGGCATCTGAGGTTTCTGGTCATCTCAACTGCATGTTGATGACAGGAATTGTCTTCAGGACTTCATTAGGGAAGTCTGAGGGAACTGGCCCTTTGCTGGGGGACAGACGTAGAGTGGCC-GCCTGGGCTACACGGCACGGGGGATCCGAACCTGTTGTAGTGGAATCCCTCAGAGTCAATAAGGCATCTGTGAGGCACTCAGGGCCCAGAGGACCTGGGGAAGGacctgtgctccttagagacccatgtcagccctggaaacgagcggggggggccgctcccaggctggtcacatgtcagccccagcaatgacagcctcctacctcccagtccccctgtggcttcagctgaatgcg--ttatccAGTTTCCAGCCCAGAACCCAAGCCTGGCCACCAGGCTCATCTGCTTTCTCTGGGCAGCTCCCAGCCCCTCCCTCTGTGGCTCCACTTTCTTCACCCACTTCTGAGCAAGTGTTGCTGGGAAATGTGCCTTCCTGCCTCTCCTGACCCCAGGCTGTCTACCCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1473648 625 - 10304083 TGGTGCCCTCTTCCCCCAGGACCCTCCTCCCCAGGGACCCTCCTCCCCCAGGGCCCTCTTTCCCCAGACCCTTGGGACAGAGACAGCCTGGGTCTCTTGAGATGGCATCTGAGGTTTCTGGTCATCTCAACTGCATGTTGATGACAGGAATTGTCTTCAGGACTTCATTAGGGAAGTCTGAGGGAACTGGCCCTTTGCTGGGGGACAGACGTAGAGTGGCC-GCCTGGGCTACACGGCATGGGGGATCCGAACCTGTTGTAGTGGAATCCCTCAGAGTCAATAAGGCATCTGTGAGGTACTCGGGGCCCAGAGGACCTGGGGAAGGacctgtgctccttagagacccatgtcagccctggaaacgagcagggggtgctgctcccaggctggtcacatgtcagccccagcaatgacagcctcctacctcccagtccccctgtggcttcagctgaatgcg--ttatccAGTTTCCAGCCCAGAACCCAAGCCTGGCCACCAGGCTCATCTGCTTTCTCTGGGCAGCTCCCAGCCCCTCCCTCTGTGGCTCCACTTTCTTCACCCACTTCTGAGCAAGTGTTGCTGGGAAATGTGCCTTCTTCCCTCTCCTGACCCCAGGCCGTCTACCCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1547885 617 - 107702431 TGGTGCCCTTTTCCCCCAGGACCCTCCTCCCCAGGGACCCTCCTCCCCCAGTTCTCTCTTTCCCCAGACCCTTGGGACAGAGACAGCCTGGGTCTCTTGAGATGGAGTCTGAGGTTTCTGGTCATCTAAACTGCATGTTGATGACAGGAATTGTCTTCAGGACTTCGTTAGGGAAGTCCGAGGGAACTGGCCCTTTGCTGGGGGACAGACGTAGAGTGGCC-GCCTGGGCTACACGGCACGGGGGATCTGAACCTGTTGTAGTGGAATCCCTCAGAGTCAATAAGGCATCTGTGAGGCACTCGGGGCCCAGAGGACCCAGGGAAGGACCTGTGCTTC-------CCCATGTCGGCCCTGGAAATGAGCA-GGGGGGCCGCTCCCAGGCTGGTCACATATCAGCCCCAGCAATGACAGCCTCCTACCTCCCAGTCCCCCTGTGGCTTCAGCTGAGTGTG--TTATCCAGTTTCCAGCCCAGAACCCAAGCCTGGCCACCAGGCTCATCTGCTTTCTCTGGGTAGCTCCCAGCCCCTCCCTCTGCAGCCCCACTTTCTTCACCCACTTCTGAGCAAGTGTTGCTGGGACATGTGCCTTCCTCCCTCTCCTGACCCCAGGCCGTCTACCCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1045382 625 - 2200435 TGGTGCCCTCTTCCCCCAGGACCCTCCTCCCCAGGGACCCTCCTCCCCCAGGGCCCTCTTTCCCCAGACCCTTGGGACAGAGACAGCCTGGGTCTCTTGGGATGGCATCTGAGGTTTCTGGTCATCTCAACTGCATGTTGATGACAGGAATTGTCTTCAGGACTTCATTAGGGAAGTCTGAGGGAACTGGCCCTTTGCTGGGGGACAGACGTAGGGTGGCC-GCCTGGGCTACACGGCATGGGGGATCCGAACCTGTTGTAGTGGAATCCCTCAGAGTCAATAAGGCATCTGTGAGGCACTCGGGGCCCAGAGGACCTGGGGAAGGacctgtgctccttagagacccatgtcagccctggaaacgagcagggggggccactcccaggctggtcacatgtcagccccagcaatgacagcctcctacctcccagtccccctgtgacttcagctgaatgcg--ttatccAGTTTCCAGCCCAGAACCCAAGCCTGGCCACCAGGCTTATCTGCTTTCTCTGGGCAGCTCCCAGCCCCTCCCTCCGTGGCTCCACTTTCTTCACCCACGTCTGAGCAAGTGTTGCTGGGAAATGTGCCTTCCTCCCTCTCCTGACCCCAGGCCGTCTACCCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1465386 623 - 13651311 TGGTGCCCTCTTCCCCCAGGACCCTCCTCCCCAGGGACCCTCCTCCCCCAGTTCTCTCTTTCCCTAGACCCTTGGGACAGAGGCGGCCTGGGTCTCTTGAGATGGAGTCTGA-GTTTCTGGTCATCTAAACTGCATGTTGATGACAGGAATTGTCTTCAGGACTTCATTAGGGAAGTCCGAGGGAACTGACCCTTTGCTGGTGGACAGACGTAGAGTGGCC-GCCTGGGCTACACGGCACGGGGGATCCGAACCTGTTGTAGTGGAATCCCTCAGAGTCAATAAGGCATCTGTGAGGCACTTGGGGCCCAGAGGACCTGGGGAAGGACCTGTGCTCCTTAGAGACGCATGTTGGCCCTGGAAATGAGCA-GGGGGGCCGCTCCCAGGCTGGTCACGTATCAG-CCCAGCAATGACAGCCTCCTACCTCTCAG-CCCCCTGTGGCTTCAGCTGAATGTGCATTATCCAGTTTCCAGCCCAGAACCCAGGCCTGGCCACCAGGCTCATCTGCTTCCCCTGGGCAGCTCCCAGCCCCTCCCTCTGCGGCCCCACTTTCTTCACCCACTTCTGAGCAAGTGTTGATGGGAAATGTGCCTTCCTCCCTCTCCTGACCCCAGGCCGTCTACCCC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283170 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I a score=36960.000000 s hg38.chr2_KI270774v1_alt 204449 10 + 223625 ACACCGGCCC s panPan2.chr2A 1435872 10 + 114371477 ACACCGGCCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1463798 10 + 1464242 ACACCGGCCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1192934 10 + 81552678 ACACAGGCCC i nomLeu3.chr19 C 0 T 18 s macFas5.chrUn_KE146933 11055 10 - 11164 ACACCAGCCC i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1513410 10 + 3644372 ACACCAGCCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1474273 10 - 10304083 ACACCAGCCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1548502 10 - 107702431 ACACCACCCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1046007 10 - 2200435 ACACCAGCCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1466009 10 - 13651311 ACACCAGCCC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283170 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e panTro5.chr2A 110014900 0 - 111504155 I a score=3276.000000 s hg38.chr2_KI270774v1_alt 204459 1 + 223625 T s panPan2.chr2A 1435882 1 + 114371477 T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015607v1 1463808 1 + 1464242 T i gorGor5.CYUI01015607v1 C 0 C 0 s macFas5.chrUn_KE146933 11065 1 - 11164 T i macFas5.chrUn_KE146933 C 0 I 41 s macNem1.NW_012011978v1 1513420 1 + 3644372 T i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1474283 1 - 10304083 T i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1548512 1 - 107702431 T i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1046017 1 - 2200435 T i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1466019 1 - 13651311 T i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283170 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e nomLeu3.chr19 1192944 18 + 81552678 T e panTro5.chr2A 110014900 0 - 111504155 I a score=58708.000000 s hg38.chr2_KI270774v1_alt 204460 23 + 223625 GCCACCGTGCCCTGGCAGTCTCT s panPan2.chr2A 1435883 23 + 114371477 GCCACCGTGCCCTGGCAGTCTCT i panPan2.chr2A C 0 M 52154 s gorGor5.CYUI01015607v1 1463809 23 + 1464242 GCCACCATGCCCTGGCAGTCTCT i gorGor5.CYUI01015607v1 C 0 C 0 s macFas5.chrUn_KE146933 11107 23 - 11164 GCCACCGTCCCCTCACAGTCTCT i macFas5.chrUn_KE146933 I 41 C 0 s macNem1.NW_012011978v1 1513421 23 + 3644372 GCCACCGTGCCCTCAGAGTCTCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1474284 23 - 10304083 GCCACCATGCCCTCACAGTCTCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1548513 22 - 107702431 GCCACCGTGCCCTCTC-GTCTCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1046018 23 - 2200435 GCCACCGTGCCCTCACAGTCTCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1466020 22 - 13651311 GCCACCGTGCCCTCGC-ATCTCT i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283170 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e nomLeu3.chr19 1192944 18 + 81552678 T e panTro5.chr2A 110014900 0 - 111504155 I a score=39738.000000 s hg38.chr2_KI270774v1_alt 204483 18 + 223625 CTACCCGACACCGGCCCT s gorGor5.CYUI01015607v1 1463832 18 + 1464242 CTACCCCACACTGGCCCT i gorGor5.CYUI01015607v1 C 0 I 20 s macFas5.chrUn_KE146933 11130 18 - 11164 CTACCCTACACCAGCCCT i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1513444 18 + 3644372 CAACCCCACACCGGCCCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1474307 18 - 10304083 CAACCCCACACCGGCCCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1548535 18 - 107702431 CTACCCCACACCACCCCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1046041 18 - 2200435 CTACCCCACACCGGCCCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1466042 18 - 13651311 CTACCCCACACCAGCCCT i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283170 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e nomLeu3.chr19 1192944 18 + 81552678 T e panPan2.chr2A 1435906 52154 + 114371477 M e panTro5.chr2A 110014900 0 - 111504155 I a score=27979.000000 s hg38.chr2_KI270774v1_alt 204501 16 + 223625 GCCACCGTGCCCTTAC s macFas5.chrUn_KE146933 11148 16 - 11164 GCCACCGTGCCCTCGC i macFas5.chrUn_KE146933 C 0 T 73 s macNem1.NW_012011978v1 1513462 16 + 3644372 GCCACCGTCCCCTCAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1474325 16 - 10304083 GCCACCATGCCCTCGC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1548553 16 - 107702431 GCCACCGTGCCCTCGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1046059 16 - 2200435 GCCACCGTGCCCTTGC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1466060 16 - 13651311 GCCACCGTGCCCTCAC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283170 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e nomLeu3.chr19 1192944 18 + 81552678 T e gorGor5.CYUI01015607v1 1463850 20 + 1464242 I e panPan2.chr2A 1435906 52154 + 114371477 M e panTro5.chr2A 110014900 0 - 111504155 I a score=1503.000000 s hg38.chr2_KI270774v1_alt 204517 2 + 223625 AG s macNem1.NW_012011978v1 1513478 2 + 3644372 AG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1474341 2 - 10304083 AG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1548569 1 - 107702431 -G i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1046075 1 - 2200435 -G i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1466076 1 - 13651311 -G i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283170 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e macFas5.chrUn_KE146933 11164 73 - 11164 T e nomLeu3.chr19 1192944 18 + 81552678 T e gorGor5.CYUI01015607v1 1463850 20 + 1464242 I e panPan2.chr2A 1435906 52154 + 114371477 M e panTro5.chr2A 110014900 0 - 111504155 I a score=4011.000000 s hg38.chr2_KI270774v1_alt 204519 2 + 223625 TC s gorGor5.CYUI01015607v1 1463870 2 + 1464242 TC i gorGor5.CYUI01015607v1 I 20 C 0 s macNem1.NW_012011978v1 1513480 2 + 3644372 TC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1474343 2 - 10304083 TC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1548570 2 - 107702431 TC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1046076 2 - 2200435 TC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1466077 2 - 13651311 TC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283170 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e macFas5.chrUn_KE146933 11164 73 - 11164 T e nomLeu3.chr19 1192944 18 + 81552678 T e panPan2.chr2A 1435906 52154 + 114371477 M e panTro5.chr2A 110014900 0 - 111504155 I a score=7896.000000 s hg38.chr2_KI270774v1_alt 204521 3 + 223625 TCT s gorGor5.CYUI01015607v1 1463872 3 + 1464242 TCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1192926 3 + 81552678 TCT i nomLeu3.chr19 T 18 C 0 s macNem1.NW_012011978v1 1513482 3 + 3644372 TCT i macNem1.NW_012011978v1 C 0 I 2 s cerAty1.NW_012000820v1 1474345 3 - 10304083 TCT i cerAty1.NW_012000820v1 C 0 I 2 s chlSab2.chr14 1548572 3 - 107702431 TCT i chlSab2.chr14 C 0 I 2 s manLeu1.NW_012103754v1 1046078 3 - 2200435 TCT i manLeu1.NW_012103754v1 C 0 I 2 s colAng1.NW_012118821v1 1466079 3 - 13651311 TCT i colAng1.NW_012118821v1 C 0 I 2 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283170 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e macFas5.chrUn_KE146933 11164 73 - 11164 T e panPan2.chr2A 1435906 52154 + 114371477 M e panTro5.chr2A 110014900 0 - 111504155 I a score=153293.000000 s hg38.chr2_KI270774v1_alt 204524 56 + 223625 ACCCCACACTGGCCCTGCTACCATGCCCTGGCAGTCTCTCTACCCCACACCGGCCC s gorGor5.CYUI01015607v1 1463875 56 + 1464242 ACCCCACACCAGCCCTGCCACCGTGCCCTGGCAGTCTCTCTACCCCACACTGGCCC i gorGor5.CYUI01015607v1 C 0 T 81 s nomLeu3.chr19 1192929 56 + 81552678 ACCCCACACAGGCCCTGCCACCGTGCCCTCACAGTCTCTCTACCCCACACCAGCCT i nomLeu3.chr19 C 0 C 0 s macFas5.chrUn_KE146933 11091 56 - 11164 ACCCCACACCGGCCCTGCCACCGTCCCCTCACAGTCTCTCTACCCTACACCAGCCC i macFas5.chrUn_KE146933 T 73 I 1 s macNem1.NW_012011978v1 1513487 56 + 3644372 ACCCCACACCGGCCCTGCCACCGTCCCCTCACAGTCTCTCGACCCCACACCAGCTC i macNem1.NW_012011978v1 I 2 I 1 s cerAty1.NW_012000820v1 1474350 56 - 10304083 ACCCCACACCAACCCTGCCACCATGCCCTCGCAGTCTCTCTACCCCACACCAACCC i cerAty1.NW_012000820v1 I 2 I 1 s chlSab2.chr14 1548577 55 - 107702431 ACCCCACACCGGCCCTGCCACCGTGCCCTCGC-GTCTCTCTACCCCACACCACCCC i chlSab2.chr14 I 2 I 1 s manLeu1.NW_012103754v1 1046083 55 - 2200435 ACCCCACACCAACCCTGCCACCGTGCCCTCGC-GTCTCTCTACCCCATACCAGCTC i manLeu1.NW_012103754v1 I 2 I 1 s colAng1.NW_012118821v1 1466084 55 - 13651311 ACCCCACACCAGCCCTGCCACCG-GCCCTCACAGTCTCTCTACCCCACACCGGCCC i colAng1.NW_012118821v1 I 2 I 1 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283170 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e panPan2.chr2A 1435906 52154 + 114371477 M e panTro5.chr2A 110014900 0 - 111504155 I a score=46678.000000 s hg38.chr2_KI270774v1_alt 204580 16 + 223625 GCCACCGTGCCCTCAC s gorGor5.CYUI01015607v1 1463850 16 + 1464242 GCCACCATGCCCTCGC i gorGor5.CYUI01015607v1 T 81 C 0 s nomLeu3.chr19 1192985 16 + 81552678 GCCACCGTGCCCTCGC i nomLeu3.chr19 C 0 C 0 s macFas5.chrUn_KE146933 11148 16 - 11164 GCCACCGTGCCCTCGC i macFas5.chrUn_KE146933 I 1 T 98 s macNem1.NW_012011978v1 1513544 16 + 3644372 GCCACTGTGCCCTCGC i macNem1.NW_012011978v1 I 1 C 0 s cerAty1.NW_012000820v1 1474407 16 - 10304083 GCCACCGTGCCCTCGT i cerAty1.NW_012000820v1 I 1 C 0 s chlSab2.chr14 1548633 16 - 107702431 GCCACTGTGCCCTCGC i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012103754v1 1046139 16 - 2200435 GCCACCGTGCCCTCGC i manLeu1.NW_012103754v1 I 1 C 0 s colAng1.NW_012118821v1 1466140 15 - 13651311 GCCACCG-GCCCTCAC i colAng1.NW_012118821v1 I 1 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283170 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e panPan2.chr2A 1435906 52154 + 114371477 M e panTro5.chr2A 110014900 0 - 111504155 I a score=52904.000000 s hg38.chr2_KI270774v1_alt 204596 24 + 223625 AGTCTCTCTACCCCACACCTGCCC s gorGor5.CYUI01015607v1 1463866 24 + 1464242 AGTCTCTCTACCCCACACCAGCCC i gorGor5.CYUI01015607v1 C 0 I 1 s nomLeu3.chr19 1193001 24 + 81552678 AATCTCTCTACCCCACACCAGCCT i nomLeu3.chr19 C 0 C 0 s macNem1.NW_012011978v1 1513560 24 + 3644372 AGTCTCTCTACCTCGCACCAACCC i macNem1.NW_012011978v1 C 0 I 1 s cerAty1.NW_012000820v1 1474423 23 - 10304083 -GTCTCTCTACCCCACACCAGCTC i cerAty1.NW_012000820v1 C 0 I 1 s chlSab2.chr14 1548649 23 - 107702431 -GTCTCTCTACCCCACACCAACCC i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012103754v1 1046155 24 - 2200435 AGTCTCTCTACCCCGCACCAACCC i manLeu1.NW_012103754v1 C 0 I 331 s colAng1.NW_012118821v1 1466155 24 - 13651311 AGTCTCTCTACCCCACACCGCCCC i colAng1.NW_012118821v1 C 0 I 1 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283170 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e macFas5.chrUn_KE146933 11164 98 - 11164 T e panPan2.chr2A 1435906 52154 + 114371477 M e panTro5.chr2A 110014900 0 - 111504155 I a score=41502.000000 s hg38.chr2_KI270774v1_alt 204620 15 + 223625 GCCACCGTGCCCTCA s gorGor5.CYUI01015607v1 1463891 15 + 1464242 GCCACCGTGCCCTGG i gorGor5.CYUI01015607v1 I 1 C 0 s nomLeu3.chr19 1193025 15 + 81552678 GCCACCGTGCCCTCA i nomLeu3.chr19 C 0 T 121 s macFas5.chrUn_KE146933 11066 15 - 11164 GCCACCGTGCCCTCA i macFas5.chrUn_KE146933 T 98 C 0 s macNem1.NW_012011978v1 1513585 15 + 3644372 GCCACCGTCCCCTCG i macNem1.NW_012011978v1 I 1 C 0 s cerAty1.NW_012000820v1 1474447 15 - 10304083 GCCACTGTGCCCTCG i cerAty1.NW_012000820v1 I 1 C 0 s chlSab2.chr14 1548673 15 - 107702431 GCCACCGTGCCCTCG i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012103754v1 1046510 15 - 2200435 GCCACCGTGCCCTCA i manLeu1.NW_012103754v1 I 331 C 0 s colAng1.NW_012118821v1 1466180 14 - 13651311 GCCACCG-GCCCTCA i colAng1.NW_012118821v1 I 1 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283170 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e panPan2.chr2A 1435906 52154 + 114371477 M e panTro5.chr2A 110014900 0 - 111504155 I a score=110044.000000 s hg38.chr2_KI270774v1_alt 204635 39 + 223625 CAGTCTCTCTACCCCACACCGGCCCTGCCACCTTGCCCT s gorGor5.CYUI01015607v1 1463906 39 + 1464242 CAGTCTCTCTACCCCACACTGGCCCTGCCACCATGCCCT i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1192919 39 + 81552678 CAGGCTGTCTACCCCACACAGGCCCTGCCACCGTGCCCT i nomLeu3.chr19 T 121 C 0 s macFas5.chrUn_KE146933 11081 39 - 11164 GAGTCTCTCAACCCCACACCGGCCCTGCCACCGTCCCCT i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1513600 39 + 3644372 CAGTCTCTCTACCCCACACCAACCCTGCCACTGTGCCCT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1474462 39 - 10304083 CAGTCTCTCTACCCCACACCAACCCTGCCACCGTGCCCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1548688 38 - 107702431 C-GTCTCTCTACCCAACACCAGCCCTGCCACCGTGCCCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1046525 39 - 2200435 CAGTCTCTCAACCCCACACCGGCCCTGCCACCGTGCCCT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1466194 39 - 13651311 CAGTCTCTCTACCCCACACCGGCCCTGCCACCGTGCCCT i colAng1.NW_012118821v1 C 0 M 503 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283170 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e panPan2.chr2A 1435906 52154 + 114371477 M e panTro5.chr2A 110014900 0 - 111504155 I a score=2800.000000 s hg38.chr2_KI270774v1_alt 204674 1 + 223625 C s gorGor5.CYUI01015607v1 1463945 1 + 1464242 C i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1192958 1 + 81552678 C i nomLeu3.chr19 C 0 C 0 s macFas5.chrUn_KE146933 11120 1 - 11164 C i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1513639 1 + 3644372 C i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1474501 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1548726 1 - 107702431 C i chlSab2.chr14 C 0 I 25 s manLeu1.NW_012103754v1 1046564 1 - 2200435 C i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283170 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e panPan2.chr2A 1435906 52154 + 114371477 M e panTro5.chr2A 110014900 0 - 111504155 I a score=57862.000000 s hg38.chr2_KI270774v1_alt 204675 37 + 223625 ACAGTCTCTCTACCCCACACCTGC-CTG---CCACCGTGCC s gorGor5.CYUI01015607v1 1463946 37 + 1464242 GCAGTCTCTCTTCCCCACACCTGC-CTG---CCGCCGTGCC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1192959 37 + 81552678 ACAGTCTCTCTACCCCACACCAGC-CTG---CCACCGTGCC i nomLeu3.chr19 C 0 C 0 s macFas5.chrUn_KE146933 11121 38 - 11164 ACAGTCTCTCTACCCTACACCAGCCCTG---CCACCGTGCC i macFas5.chrUn_KE146933 C 0 C 0 s macNem1.NW_012011978v1 1513640 38 + 3644372 GCAGTCTCTCTACCCCACACCAACCCTG---CCACCGTGCC i macNem1.NW_012011978v1 C 0 M 2828 s cerAty1.NW_012000820v1 1474502 41 - 10304083 ACAGTCTCTCTACCCCACACCAACCCTGCCACCACCGTGCC i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 1046565 38 - 2200435 ACAGTCTCTCGACCCCACACCAGCTCTG---CCACCATGCC i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283170 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e chlSab2.chr14 1548727 25 - 107702431 I e panPan2.chr2A 1435906 52154 + 114371477 M e panTro5.chr2A 110014900 0 - 111504155 I a score=6710.000000 s hg38.chr2_KI270774v1_alt 204712 5 + 223625 CTCAC s gorGor5.CYUI01015607v1 1463983 5 + 1464242 CTCGC i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1192996 5 + 81552678 CTCGC i nomLeu3.chr19 C 0 C 0 s macFas5.chrUn_KE146933 11159 5 - 11164 CTCGC i macFas5.chrUn_KE146933 C 0 N 0 s cerAty1.NW_012000820v1 1474543 5 - 10304083 CTCGC i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 1046603 5 - 2200435 CTCGC i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283170 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e chlSab2.chr14 1548727 25 - 107702431 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1435906 52154 + 114371477 M e panTro5.chr2A 110014900 0 - 111504155 I a score=35988.000000 s hg38.chr2_KI270774v1_alt 204717 63 + 223625 AGACTCTCTACCCCACACC-GGCCCGCCACCGTGCCCTCACAGTCTCTCTACCCCACACCTGCC- s gorGor5.CYUI01015607v1 1463988 63 + 1464242 AGTCTCTCTACCCCACACT-GCCCTGCCACCGTGCCCTCGCAGTCTCTCTTCCCCACACCTGCC- i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1193001 57 + 81552678 AATCTCTCTACCCCACACC-AGCCTGCCACCGTGCCCTCACAGTCTCTCTG------ATCTGTC- i nomLeu3.chr19 C 0 T 114 s cerAty1.NW_012000820v1 1474548 63 - 10304083 -GTCTCTCTACCCCACACCAACCCTGCCACCGTGCTCTCGC-GTCTCTCTACCCCACACCAACCC i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 1046608 64 - 2200435 AGTCTCTCTACCCCGCACCAACCCTGCCACCGTGCCTTCAT-GTCTCTCTACCCCACACCAACCC i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283170 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e chlSab2.chr14 1548727 25 - 107702431 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1435906 52154 + 114371477 M e panTro5.chr2A 110014900 0 - 111504155 I a score=10935.000000 s hg38.chr2_KI270774v1_alt 204780 12 + 223625 TGCCACCGTGCC s gorGor5.CYUI01015607v1 1464051 12 + 1464242 TGCCACCATGCC i gorGor5.CYUI01015607v1 C 0 T 80 s nomLeu3.chr19 1192944 12 + 81552678 TGCCACCGTGCC i nomLeu3.chr19 T 114 C 0 s cerAty1.NW_012000820v1 1474611 12 - 10304083 TGCCACCGTGCC i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 1046672 12 - 2200435 TGCCACCATGCC i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283170 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e chlSab2.chr14 1548727 25 - 107702431 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1435906 52154 + 114371477 M e panTro5.chr2A 110014900 0 - 111504155 I a score=42246.000000 s hg38.chr2_KI270774v1_alt 204792 68 + 223625 CTCGCAGTCTCTCTTCCCCACACCTGC-CTGCCACCGTGCCCTCACAGACTCTCTACCCCACACCGG--CC s gorGor5.CYUI01015607v1 1463983 68 + 1464242 CTCGCAGTCTCTCTACCCCACACTGCC-CTGCCACCGTGCCCTCGCAGTCTCTCTTCCCCACACCTG--CC i gorGor5.CYUI01015607v1 T 80 I 12 s nomLeu3.chr19 1192956 68 + 81552678 CTCACAGTCTCTCTACCCCACACCAGC-CTGCCACCGTGCCCTCGCAATCTCTCTACCCCACACCAG--CC i nomLeu3.chr19 C 0 C 0 s cerAty1.NW_012000820v1 1474623 66 - 10304083 CTCGC-GTCTCTGTACCCCACACCAACCCTGACACCGTGCCCTCGC-GTCTCTCTACCCCACACCAG--C- i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 1046684 69 - 2200435 CTCGC-GTCTCTCTACCCCACACCAGCTCTGCCACCGTGCCCTCGCAGTCTCTCTACCCCACACCAACCC- i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283170 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e chlSab2.chr14 1548727 25 - 107702431 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1435906 52154 + 114371477 M e panTro5.chr2A 110014900 0 - 111504155 I a score=21750.000000 s hg38.chr2_KI270774v1_alt 204860 26 + 223625 CGCCACCGTGCCCTCACAGTCTCTCT s gorGor5.CYUI01015607v1 1464063 26 + 1464242 CGCCACCGTGCCCTCACAGTCTCTCT i gorGor5.CYUI01015607v1 I 12 C 0 s nomLeu3.chr19 1193024 26 + 81552678 TGCCACCGTGCCCTCACAGTCTCTCT i nomLeu3.chr19 C 0 C 0 s cerAty1.NW_012000820v1 1474689 26 - 10304083 TGCCACTGTGCACTCGCAGTCTCTCT i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 1046753 26 - 2200435 TGCCACCATGCCCTCGCAGTCTCTCT i manLeu1.NW_012103754v1 C 0 I 134 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283170 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e chlSab2.chr14 1548727 25 - 107702431 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1435906 52154 + 114371477 M e panTro5.chr2A 110014900 0 - 111504155 I a score=8064.000000 s hg38.chr2_KI270774v1_alt 204886 60 + 223625 GATCTGTCTCCCTCTCCTGCCCCCAGACCATCTACCTCACACAGGCCCTGCCACCGTGT-----------------------------G s gorGor5.CYUI01015607v1 1464089 60 + 1464242 GATCTGTCTCCCTCTCCTGCCCCCAGACCATCTACCTCACACAGGCCCTGCCACCATGT-----------------------------G i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1193050 89 + 81552678 GATCTGTCTCCCTCTCCTGACCCCAGACCATCTACCCCACACAGGCCCTGCAACTGTGCCCTCGCAGTCTCTCTGATCTGTCCCTGGAG i nomLeu3.chr19 C 0 C 0 s cerAty1.NW_012000820v1 1474715 15 - 10304083 GATCTGT-------------CCCTGGAT------------------------------------------------------------- i cerAty1.NW_012000820v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283170 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1046779 134 - 2200435 I e chlSab2.chr14 1548727 25 - 107702431 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1435906 52154 + 114371477 M e panTro5.chr2A 110014900 0 - 111504155 I a score=14835.000000 s hg38.chr2_KI270774v1_alt 204946 11 + 223625 ATGCCCAGCCA s gorGor5.CYUI01015607v1 1464149 11 + 1464242 ATGCCCAGCCA i gorGor5.CYUI01015607v1 C 0 C 0 s nomLeu3.chr19 1193139 11 + 81552678 ATGCCCAGCGA i nomLeu3.chr19 C 0 C 0 s cerAty1.NW_012000820v1 1474730 11 - 10304083 ATGCCCAGCCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1548752 11 - 107702431 ATGCCCAGCCA i chlSab2.chr14 I 25 C 0 s manLeu1.NW_012103754v1 1046913 11 - 2200435 ATGCCCAGCCA i manLeu1.NW_012103754v1 I 134 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283170 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1435906 52154 + 114371477 M e panTro5.chr2A 110014900 0 - 111504155 I a score=117756.000000 s hg38.chr2_KI270774v1_alt 204957 82 + 223625 TTCCCACTTCTTGGCTTTTATTCAAGCCTCAATCTCTCCATAGAATACTCCCTCCTTATCATCTCAACCTGGCTTCGAATGT s gorGor5.CYUI01015607v1 1464160 82 + 1464242 TTCCCACTTCTTGGCTTTTATTCAAGCCTCAATCTCTCCATAGAATACTCCCTCCTTATCATCTCAACCTGGCTTCGAATGT i gorGor5.CYUI01015607v1 C 0 N 0 s nomLeu3.chr19 1193150 82 + 81552678 TGCCCACTTGTTGCCTTTTATGCAAGCCTCAATCTTTCTGTGGAATACTCCCTCCTTATCATCTCAACCCAGCCTGGAATGT i nomLeu3.chr19 C 0 C 0 s cerAty1.NW_012000820v1 1474741 82 - 10304083 TTCCCACTTCTTGCCTTTTGTTCAAGCCTCAATCTTTCCATAGAATACTATCTCCTTATCATCTCAGTGCAGCCTTGCATGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1548763 82 - 107702431 TTCCCACTTCTTGCCTTTTGTTCAAGCCTCAGTCTTTCCATAGAATACTATCTCCTTATCATCTCAGCACAGCCTTGCATGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1046924 81 - 2200435 TTCCCACTTC-TGTCTTTTGTTCAAGCCTCAATCTTTCCATAGAATACTATCTCCTTATCATCTCAACGCAGCCTTGCATGT i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1283170 79 - 7082604 TTCCCACTTTCTGCCTTCTGCTCAAGCCTTGATCTTTCCGTAGAATGCTCTCTC---ATCACCTCAACCCAGCCTCGAGTAT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1435906 52154 + 114371477 M e panTro5.chr2A 110014900 0 - 111504155 I a score=18918.000000 s hg38.chr2_KI270774v1_alt 205039 16 + 223625 TCAAGTCTGACACATC s nomLeu3.chr19 1193232 16 + 81552678 TCAAGTCTGACACATC i nomLeu3.chr19 C 0 N 0 s cerAty1.NW_012000820v1 1474823 16 - 10304083 TCAGGTCTGACACATC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1548845 16 - 107702431 TCAAGTCTGACACATC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1047005 16 - 2200435 TCAGGTCTGACACATC i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1283249 16 - 7082604 TCAAGGCCGATGCATC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1435906 52154 + 114371477 M e panTro5.chr2A 110014900 0 - 111504155 I a score=19376.000000 s hg38.chr2_KI270774v1_alt 205055 23 + 223625 GCAAAGGCTACACCCAAACACCA s cerAty1.NW_012000820v1 1474839 23 - 10304083 GCTAAGGCTCCACCCAAACACCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1548861 23 - 107702431 GCTAAGGCTCCACCCAAACACCA i chlSab2.chr14 C 0 I 53 s manLeu1.NW_012103754v1 1047021 23 - 2200435 GCTAAGGCTCCACCCAAACACCA i manLeu1.NW_012103754v1 C 0 C 0 s saiBol1.JH378218 1283265 23 - 7082604 GCTAAGGCTCCACCCAAATGCCA i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1435906 52154 + 114371477 M e panTro5.chr2A 110014900 0 - 111504155 I a score=1173.000000 s hg38.chr2_KI270774v1_alt 205078 4 + 223625 CCCA s cerAty1.NW_012000820v1 1474862 4 - 10304083 CCCA i cerAty1.NW_012000820v1 C 0 I 22 s manLeu1.NW_012103754v1 1047044 4 - 2200435 CCCA i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e chlSab2.chr14 1548884 53 - 107702431 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1435906 52154 + 114371477 M e panTro5.chr2A 110014900 0 - 111504155 I a score=1234.000000 s hg38.chr2_KI270774v1_alt 205082 20 + 223625 CTGTCTGCAACCTCCCCAA--A s manLeu1.NW_012103754v1 1047048 22 - 2200435 CTGTGTGCAACCTCCCCAAATA i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e chlSab2.chr14 1548884 53 - 107702431 I e cerAty1.NW_012000820v1 1474866 22 - 10304083 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1435906 52154 + 114371477 M e panTro5.chr2A 110014900 0 - 111504155 I a score=14874.000000 s hg38.chr2_KI270774v1_alt 205102 35 + 223625 CCCCCACTGTATGCAAGGTCCTCAAATCCCCCCAC s cerAty1.NW_012000820v1 1474888 34 - 10304083 CCCCCACTGTCTGCAACCCCCTCAAAT-CCCCCAC i cerAty1.NW_012000820v1 I 22 C 0 s chlSab2.chr14 1548937 35 - 107702431 CCCCCACTGTGTGCAACCTCCCCAAATCCCCCCAC i chlSab2.chr14 I 53 C 0 s manLeu1.NW_012103754v1 1047070 34 - 2200435 CCCCCACTGTCTGCAACCCCCTCAAAT-CCCCCAC i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1435906 52154 + 114371477 M e panTro5.chr2A 110014900 0 - 111504155 I a score=11126.000000 s hg38.chr2_KI270774v1_alt 205137 67 + 223625 TGTGTGCAACCTCCTCAAA-TCCCACCACTGTGTGCAACCC-CCCAAATCTCCCCCACTGTGAGCAA-AA s cerAty1.NW_012000820v1 1474922 67 - 10304083 TATGTGCAACCCACCCAAATTCCCCCCACTGTGTGCAACCCTCCCAAATC-CCCCCACCGTGTGCAA--C i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1548972 67 - 107702431 TGTGTGCAGCCTCCCCAAA-TCCCCCCACTGTGTGCAACCC-CCCAAATC-TCCCCACTGTTTGCAACCC i chlSab2.chr14 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1435906 52154 + 114371477 M e panTro5.chr2A 110014900 0 - 111504155 I a score=38584.000000 s hg38.chr2_KI270774v1_alt 205204 106 + 223625 CCCCAAATCCCCCCACTGGGTGCAACCTCCTCAAATCCCACCACTGTGTGAAACCTCCTCAAATCCCCCCACTGTGTGCAACTTCCTCAAATCCCCTCCACTCTGT s panPan2.chr2A 1488063 104 + 114371477 CCCCAAATCCCCCCACTGTAAGTAACCTCCTCAAGTCCCCCCGCACTGTGCAACCTCCCCAAATGCCCCCACTGTGTGCAACCTCC-CAAAT-TCTTCCACTCTGT i panPan2.chr2A M 52154 C 0 s cerAty1.NW_012000820v1 1474989 103 - 10304083 CCCCAAATCCCCCCACTGTGTGCAACCTCCCCAAAT-CCTCCACTGTGTGCAACCTCCCCAGATCCCCCCACTGTGTGCAACACCC-TCAAA-TCCCCCACTGTGT i cerAty1.NW_012000820v1 C 0 T 100 s chlSab2.chr14 1549039 102 - 107702431 CCCCAAATCCCCCCACTGTGTGCAACACACCCAAATCCCCCCACTGTGTGCAACCCCCTCAAAT--CCCCACCGTGTGCAACCCCC-TAAAT-CCCCCCACTGTGT i chlSab2.chr14 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 110014900 0 - 111504155 I a score=4419.000000 s hg38.chr2_KI270774v1_alt 205310 19 + 223625 GTAACCTCCCCAAATTCCC s panPan2.chr2A 1488167 19 + 114371477 GCAACCTCCCCAAATACCC i panPan2.chr2A C 0 C 0 s chlSab2.chr14 1549141 19 - 107702431 GCAACCTCCTCAAATCCCC i chlSab2.chr14 C 0 T 276 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e cerAty1.NW_012000820v1 1475092 100 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 110014900 0 - 111504155 I a score=100.000000 s hg38.chr2_KI270774v1_alt 205329 1 + 223625 C s panPan2.chr2A 1488186 1 + 114371477 C i panPan2.chr2A C 0 I 25 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1549160 276 - 107702431 T e cerAty1.NW_012000820v1 1475092 100 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 110014900 0 - 111504155 I a score=0.000000 s hg38.chr2_KI270774v1_alt 205330 43 + 223625 CCACTGTGTGCAACCTCCTCAGATCCCTCCCACGCTGTGCAAA e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1549160 276 - 107702431 T e cerAty1.NW_012000820v1 1475092 100 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488187 25 + 114371477 I e panTro5.chr2A 110014900 0 - 111504155 I a score=2074.000000 s hg38.chr2_KI270774v1_alt 205373 25 + 223625 CTCCCCAGATCCCCCCAACTCTGTG s panPan2.chr2A 1488212 25 + 114371477 CTCCCAAAATCCCCCCAACTCTGTG i panPan2.chr2A I 25 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1549160 276 - 107702431 T e cerAty1.NW_012000820v1 1475092 100 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 110014900 0 - 111504155 I a score=5202.000000 s hg38.chr2_KI270774v1_alt 205398 32 + 223625 CAACCTCCCCAAATCTCCCCAACTGTGTGCAA s panTro5.chr2A 1513930 32 + 111504155 CAACCTCCCCAAATCGCCCCAACTGTCTGCAA i panTro5.chr2A I 13442 I 141 s panPan2.chr2A 1488237 30 + 114371477 CAACCTCCGCCTATCCCCCC--CAGTGTGCAA i panPan2.chr2A C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1549160 276 - 107702431 T e cerAty1.NW_012000820v1 1475092 100 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M a score=-61.000000 s hg38.chr2_KI270774v1_alt 205430 6 + 223625 CCTCAC s panPan2.chr2A 1488267 5 + 114371477 CCCC-C i panPan2.chr2A C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1549160 276 - 107702431 T e cerAty1.NW_012000820v1 1475092 100 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1513962 141 + 111504155 I a score=7945.000000 s hg38.chr2_KI270774v1_alt 205436 33 + 223625 CAAATCCCGACACTGTGTGCAACCTCCCCAAAT s panPan2.chr2A 1488272 33 + 114371477 CAAATCCCCCAACTGTGTGCAGCCTCCCCAAAT i panPan2.chr2A C 0 I 8 s cerAty1.NW_012000820v1 1474992 33 - 10304083 CAAATCCCCCCACTGTGTGCAACCTCCCCAAAT i cerAty1.NW_012000820v1 T 100 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1549160 276 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1513962 141 + 111504155 I a score=291.000000 s hg38.chr2_KI270774v1_alt 205469 3 + 223625 CCT s cerAty1.NW_012000820v1 1475025 3 - 10304083 CCT i cerAty1.NW_012000820v1 C 0 I 64 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1549160 276 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488305 8 + 114371477 I e panTro5.chr2A 1513962 141 + 111504155 I a score=0.000000 s hg38.chr2_KI270774v1_alt 205472 65 + 223625 GCGCACTCTGTGCAACCTCCCCAAATCCGCCCCACCCTGTGCATCCTCCCAAAATCCCCCACACT e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1549160 276 - 107702431 T e cerAty1.NW_012000820v1 1475028 64 - 10304083 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488305 8 + 114371477 I e panTro5.chr2A 1513962 141 + 111504155 I a score=191.000000 s hg38.chr2_KI270774v1_alt 205537 2 + 223625 GT s panTro5.chr2A 1514103 2 + 111504155 GT i panTro5.chr2A I 141 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1549160 276 - 107702431 T e cerAty1.NW_012000820v1 1475028 64 - 10304083 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488305 8 + 114371477 I a score=5624.000000 s hg38.chr2_KI270774v1_alt 205539 24 + 223625 GTGCAACCTCCTCAAATCCCCCCA s panTro5.chr2A 1514105 24 + 111504155 GTGCAACCTCCTCAAATCCCCCCA i panTro5.chr2A C 0 I 268 s panPan2.chr2A 1488313 24 + 114371477 GTGCTACCTCCTCAAATCCCCCGT i panPan2.chr2A I 8 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1549160 276 - 107702431 T e cerAty1.NW_012000820v1 1475028 64 - 10304083 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M a score=1497.000000 s hg38.chr2_KI270774v1_alt 205563 17 + 223625 ACTGTTTGCAACCTCCC s panPan2.chr2A 1488337 17 + 114371477 ACTGTTTGCAACCTCCT i panPan2.chr2A C 0 I 155 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1549160 276 - 107702431 T e cerAty1.NW_012000820v1 1475028 64 - 10304083 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1514129 268 + 111504155 I a score=0.000000 s hg38.chr2_KI270774v1_alt 205580 7 + 223625 AAATCCC e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1549160 276 - 107702431 T e cerAty1.NW_012000820v1 1475028 64 - 10304083 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488354 155 + 114371477 I e panTro5.chr2A 1514129 268 + 111504155 I a score=468.000000 s hg38.chr2_KI270774v1_alt 205587 7 + 223625 CCCACTT s chlSab2.chr14 1548884 7 - 107702431 CCCACTG i chlSab2.chr14 T 276 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e cerAty1.NW_012000820v1 1475028 64 - 10304083 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488354 155 + 114371477 I e panTro5.chr2A 1514129 268 + 111504155 I a score=418.000000 s hg38.chr2_KI270774v1_alt 205594 3 + 223625 TGA s panPan2.chr2A 1488509 3 + 114371477 TGA i panPan2.chr2A I 155 C 0 s chlSab2.chr14 1548891 3 - 107702431 TGT i chlSab2.chr14 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e cerAty1.NW_012000820v1 1475028 64 - 10304083 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1514129 268 + 111504155 I a score=53980.000000 s hg38.chr2_KI270774v1_alt 205597 122 + 223625 GCAACCTCCCCAAATC-CCCCCACTGTGTAAAACCTCCCCAAATCCCCCCACTGTGAGCAACCTCCCCAAATCCCCCCACTGTGAGCAACCTCCCCAAATCCCCCCACTGTGTGCAACTTCCC s panPan2.chr2A 1488512 123 + 114371477 GCAACCTCCCCACATCTCCCCCACTGAGTACAACCTCCCCAAATTCCCCCACTGTGAGCAACTTCCCAAAATCCCCCCAGTGTGAGCAATGTCCCCAAATCCCCCCACTGTGAGCAACCTGCC i panPan2.chr2A C 0 C 0 s cerAty1.NW_012000820v1 1475092 122 - 10304083 GCAACCTCCCCAAATC-CCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTATGCAACCTCCCCAAATCCCCCCACTGTATGCAACCTCCCCAAATCCCCCCACTGTGTGCAACCTCCC i cerAty1.NW_012000820v1 I 64 T 156 s chlSab2.chr14 1548894 120 - 107702431 GCAGCCTCCCCAAATC-CCCCCACTGTGTGCAACGCCCTCAAAT-CCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTGTGCAGCCTCCCCAAATCCCCCCACTGTGTGCAACCCCC- i chlSab2.chr14 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1514129 268 + 111504155 I a score=1978.000000 s hg38.chr2_KI270774v1_alt 205719 11 + 223625 TAAATCCCCCC s panPan2.chr2A 1488635 11 + 114371477 CAATTTCCCCC i panPan2.chr2A C 0 C 0 s chlSab2.chr14 1549014 11 - 107702431 CAAATCTCCCC i chlSab2.chr14 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e cerAty1.NW_012000820v1 1475214 156 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1514129 268 + 111504155 I a score=5687.000000 s hg38.chr2_KI270774v1_alt 205730 104 + 223625 ACTGTGTTCAACCTCCCCAAATACCTCCCATTGTGTGCAAACAC-CCCAAATCCCTCCCACTCTGTGCAACCTCCCCAAATTACCCCCACTGTGTGCAACCTCCT s chlSab2.chr14 1549025 99 - 107702431 ACTGTTTGCAACCCCCCCAAAT-CCCCCCACTGTGTGC-AACACACCCAAATCCC-CCCACTGTGTGCAACCCCCTCAAAT---CCCCACCGTGTGCAACCCCCT i chlSab2.chr14 C 0 T 240 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e cerAty1.NW_012000820v1 1475214 156 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488646 0 + 114371477 C e panTro5.chr2A 1514129 268 + 111504155 I a score=0.000000 s hg38.chr2_KI270774v1_alt 205834 41 + 223625 CAGTTCCCTCCCACTCTATGCAAACTCCCCAAATCCCCCCG e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1549124 240 - 107702431 T e cerAty1.NW_012000820v1 1475214 156 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488646 0 + 114371477 C e panTro5.chr2A 1514129 268 + 111504155 I a score=3932.000000 s hg38.chr2_KI270774v1_alt 205875 57 + 223625 ACTCTATGCAACCTCCCCAAATCCCCCCCACTCTGAGCAACCTCCCCAAATCCCCAC s panPan2.chr2A 1488646 57 + 114371477 ACTCTGTGCAACCTCCCGAAATCCACCCCACCGTGTGCAACGTCCCCAAATCCCCCC i panPan2.chr2A C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1549124 240 - 107702431 T e cerAty1.NW_012000820v1 1475214 156 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1514129 268 + 111504155 I a score=11006.000000 s hg38.chr2_KI270774v1_alt 205932 57 + 223625 CACTCTGTGCAACCTCCCCAAATCCCCCACACTGTGTGCAA----ACTCCTCAAATCCCCC s panTro5.chr2A 1514397 59 + 111504155 CACTCTGTGCAACCCCCCCAAATTCCCCCTACTGTGT--AATGCCACTCCCCAAATCCCCC i panTro5.chr2A I 268 C 0 s panPan2.chr2A 1488703 57 + 114371477 TACTCTGTGCAACCTCCTGAAATCCCCCCCACTGTGTGCAA----CCTTCTCAAATCCCCC i panPan2.chr2A C 0 T 122 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1549124 240 - 107702431 T e cerAty1.NW_012000820v1 1475214 156 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M a score=1139.000000 s hg38.chr2_KI270774v1_alt 205989 56 + 223625 TACTGTGAGCAACCTCCTCAAATCACCCCCCACTGTGTTCAACCTCCTCGAATCAC s panTro5.chr2A 1514456 33 + 111504155 CACTGTAAGTAACCTCCTCAAGTCCCCCCGCAC----------------------- i panTro5.chr2A C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1549124 240 - 107702431 T e cerAty1.NW_012000820v1 1475214 156 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T a score=5334.000000 s hg38.chr2_KI270774v1_alt 206045 27 + 223625 CCCACTGTGTGCAGCCTCCCCAAATCC s panTro5.chr2A 1514489 20 + 111504155 -------TGTGCAACCTCCCCAAATGC i panTro5.chr2A C 0 C 0 s chlSab2.chr14 1548884 27 - 107702431 CCCACTGTGTGCAGCCTCCCCAAATCC i chlSab2.chr14 T 240 I 4 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e cerAty1.NW_012000820v1 1475214 156 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T a score=500.000000 s hg38.chr2_KI270774v1_alt 206072 5 + 223625 CCCCC s panTro5.chr2A 1514509 5 + 111504155 CCCCC i panTro5.chr2A C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1548911 4 - 107702431 I e cerAty1.NW_012000820v1 1475214 156 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T a score=7734.000000 s hg38.chr2_KI270774v1_alt 206077 16 + 223625 ACTGTGTGCAACCTCC s panTro5.chr2A 1514514 16 + 111504155 ACTGTGTGCAACCTCC i panTro5.chr2A C 0 C 0 s cerAty1.NW_012000820v1 1475058 16 - 10304083 ACTGTGTGCAACACCC i cerAty1.NW_012000820v1 T 156 C 0 s chlSab2.chr14 1548915 16 - 107702431 ACTGTGTGCAACGCCC i chlSab2.chr14 I 4 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T a score=22840.000000 s hg38.chr2_KI270774v1_alt 206093 95 + 223625 TCAGGTCCCCCACTGTGTGCAACCCCCCCAAATACCGCCACTGTGTGCAACCTCTTCTAATCCCCTCACTGTGTGCAACCTCCCCAAATCCCCCC s cerAty1.NW_012000820v1 1475074 95 - 10304083 TCAAATCCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTATGCAACCTCCCCAAATCCCCCC i cerAty1.NW_012000820v1 C 0 T 303 s chlSab2.chr14 1548931 94 - 107702431 TCAAATCCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTGTGCAGCCTCCCCAAATCCCCCCACTGTGTGCAACC-CCCCAAATCTCCCC i chlSab2.chr14 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1514530 0 + 111504155 C a score=1897.000000 s hg38.chr2_KI270774v1_alt 206188 29 + 223625 ACTGTGAGCAAACTCCTCAAATCCCCCCA s chlSab2.chr14 1549025 29 - 107702431 ACTGTTTGCAACCCCCCCAAATCCCCCCA i chlSab2.chr14 C 0 T 143 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e cerAty1.NW_012000820v1 1475169 303 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1514530 0 + 111504155 C a score=0.000000 s hg38.chr2_KI270774v1_alt 206217 245 + 223625 ACTGTGTGTGAGCTCCCCAAATCCCCCCAGTGTGTACAACTTGCTTAAATCCCCCCAACTGTAATCAACCTCCCCAAATCCCCCCTACTGTGTGCAACCTTCCCAAATCCCCCCACTCTGTGCAACTTCCCCAAATCCCCCCTACTCTCTGCAAACTCACCAAATCCCCCCCACTCTGTGCAACCTTCCCAAATCCCCCCCATTGTGGGCAACAACACCAAATCCTGCCACTGTGTGCAACCTCA e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1549054 143 - 107702431 T e cerAty1.NW_012000820v1 1475169 303 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1514530 0 + 111504155 C a score=755.000000 s hg38.chr2_KI270774v1_alt 206462 8 + 223625 CCAAATTC s panTro5.chr2A 1514530 8 + 111504155 CCAAATTC i panTro5.chr2A C 0 I 45 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1549054 143 - 107702431 T e cerAty1.NW_012000820v1 1475169 303 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T a score=0.000000 s hg38.chr2_KI270774v1_alt 206470 14 + 223625 CCCCCACTCCGTGC e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1549054 143 - 107702431 T e cerAty1.NW_012000820v1 1475169 303 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1514538 45 + 111504155 I a score=3893.000000 s hg38.chr2_KI270774v1_alt 206484 52 + 223625 AACCTCCCCAAATACCCCCAACTCTGTGCAACCTCCCAAAATCCCCCAAACT s panTro5.chr2A 1514583 52 + 111504155 AACCTTCCCAAATCCCCCCACCTCTGTGCAGCCTCCAAAAATCCCCCCAACT i panTro5.chr2A I 45 I 88 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1549054 143 - 107702431 T e cerAty1.NW_012000820v1 1475169 303 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T a score=0.000000 s hg38.chr2_KI270774v1_alt 206536 26 + 223625 GTGTGCAACCTCCTCAAATCCCCATC e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1549054 143 - 107702431 T e cerAty1.NW_012000820v1 1475169 303 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1514635 88 + 111504155 I a score=382.000000 s hg38.chr2_KI270774v1_alt 206562 4 + 223625 CTGT s cerAty1.NW_012000820v1 1474866 4 - 10304083 CTGT i cerAty1.NW_012000820v1 T 303 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1549054 143 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1514635 88 + 111504155 I a score=9678.000000 s hg38.chr2_KI270774v1_alt 206566 48 + 223625 GTGCAACCTCCTCAAATCCACCCCACTGTGTGCAACCTCCTCAAATCC s panTro5.chr2A 1514723 48 + 111504155 GTGCTACCTCCTCAAATCCCCCGTACTGTTTGCAACCTCCTGAAATCC i panTro5.chr2A I 88 C 0 s cerAty1.NW_012000820v1 1474870 47 - 10304083 GTGCAGCCTCCCCAAATCCCCC-CACTGTCTGCAACCCCCTCAAATCC i cerAty1.NW_012000820v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1549054 143 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T a score=300.000000 s hg38.chr2_KI270774v1_alt 206614 3 + 223625 CCC s panTro5.chr2A 1514771 3 + 111504155 CCC i panTro5.chr2A C 0 I 2 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1549054 143 - 107702431 T e cerAty1.NW_012000820v1 1474917 0 - 10304083 C e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T a score=0.000000 s hg38.chr2_KI270774v1_alt 206617 3 + 223625 CAC e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466233 503 - 13651311 M e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1549054 143 - 107702431 T e cerAty1.NW_012000820v1 1474917 0 - 10304083 C e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1514774 2 + 111504155 I a score=8446.000000 s hg38.chr2_KI270774v1_alt 206620 165 + 223625 TGTGTGCAACCTCCTCAAATCTCCTCACAGTGAGCAACCTCCTCAAATCCCCACACTGTGTGCAACCACCCCAAATCCCCCTACTGTAAGCAACCTCCCCAAATCCCTCCACTCTGTTCAACCTCCCCAAATCCCCCCCACTCTGTGCAACCTCC--AACTTTCCCT s colAng1.NW_012118821v1 1466736 161 - 13651311 TGTATGCAACCTCCTCAAATCACCCCACTGTGTGAAACCCCCTCAAATATCCCCACTGTGTGCAACC-CCCCAAACCCCCC-ACTGTGTGCAACC-CCCGAAATCCCCCCACTGTGTGCAGCC--CTCAAAATCCCCCCACTGTGTGCAACCTCCTGAAATTCCCC- i colAng1.NW_012118821v1 M 503 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1549054 143 - 107702431 T e cerAty1.NW_012000820v1 1474917 0 - 10304083 C e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1514774 2 + 111504155 I a score=951.000000 s hg38.chr2_KI270774v1_alt 206785 5 + 223625 CCCAT s cerAty1.NW_012000820v1 1474917 5 - 10304083 CCCAC i cerAty1.NW_012000820v1 C 0 C 0 s colAng1.NW_012118821v1 1466897 4 - 13651311 -CCAC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e manLeu1.NW_012103754v1 1047104 0 - 2200435 C e chlSab2.chr14 1549054 143 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1514774 2 + 111504155 I a score=546.000000 s hg38.chr2_KI270774v1_alt 206790 1 + 223625 T s cerAty1.NW_012000820v1 1474922 1 - 10304083 T i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 1047104 1 - 2200435 T i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1466901 1 - 13651311 T i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e chlSab2.chr14 1549054 143 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1514774 2 + 111504155 I a score=28126.000000 s hg38.chr2_KI270774v1_alt 206791 39 + 223625 GTGTGCAACCCCCCCAAA-TCCCCCCACTGTGTGCAACCC s panTro5.chr2A 1514776 39 + 111504155 GTGTTCAACACCCCCAAA-TCCCCCCGCTGTGTGCAACTC i panTro5.chr2A I 2 C 0 s cerAty1.NW_012000820v1 1474923 40 - 10304083 ATGTGCAACCCACCCAAATTCCCCCCACTGTGTGCAACCC i cerAty1.NW_012000820v1 C 0 I 1 s manLeu1.NW_012103754v1 1047105 40 - 2200435 GTGTGCAACCCACCCAAATTCCCCCCACTGTGTGCAACCC i manLeu1.NW_012103754v1 C 0 I 910 s colAng1.NW_012118821v1 1466902 39 - 13651311 GTGTGCAGCCCCCTTAAA-TCCCTCCACTGTGTACAACCC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e chlSab2.chr14 1549054 143 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T a score=4311.000000 s hg38.chr2_KI270774v1_alt 206830 13 + 223625 CCCAAATCCCACC s panTro5.chr2A 1514815 13 + 111504155 CGCAGATCCCCCC i panTro5.chr2A C 0 C 0 s cerAty1.NW_012000820v1 1474964 12 - 10304083 CCCAAATCCCCC- i cerAty1.NW_012000820v1 I 1 C 0 s colAng1.NW_012118821v1 1466941 13 - 13651311 CCCAAATCCCCCC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e manLeu1.NW_012103754v1 1047145 910 - 2200435 I e chlSab2.chr14 1549054 143 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T a score=12972.000000 s hg38.chr2_KI270774v1_alt 206843 14 + 223625 CACTGTGTGCAACC s panTro5.chr2A 1514828 14 + 111504155 CACTGTGTGCAACC i panTro5.chr2A C 0 C 0 s cerAty1.NW_012000820v1 1474976 14 - 10304083 CACCGTGTGCAACC i cerAty1.NW_012000820v1 C 0 I 164 s manLeu1.NW_012103754v1 1048055 14 - 2200435 CACTGTGTGCAACC i manLeu1.NW_012103754v1 I 910 C 0 s colAng1.NW_012118821v1 1466954 14 - 13651311 CACTGTGTGCAACC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e chlSab2.chr14 1549054 143 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T a score=5051.000000 s hg38.chr2_KI270774v1_alt 206857 8 + 223625 TCCTCAAA s panTro5.chr2A 1514842 8 + 111504155 TCCGCAAA i panTro5.chr2A C 0 I 1 s cerAty1.NW_012000820v1 1475154 8 - 10304083 TCCCCAAA i cerAty1.NW_012000820v1 I 164 C 0 s manLeu1.NW_012103754v1 1048069 8 - 2200435 CCCTCAAA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1466968 8 - 13651311 TCTGCAAA i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e chlSab2.chr14 1549054 143 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T a score=7107.000000 s hg38.chr2_KI270774v1_alt 206865 17 + 223625 TCCTCCCACTGTGTGCA s cerAty1.NW_012000820v1 1475162 17 - 10304083 TCCCCCCACTGTATGCA i cerAty1.NW_012000820v1 C 0 C 0 s manLeu1.NW_012103754v1 1048077 16 - 2200435 T-CCCCCACTGTGTGCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1466976 17 - 13651311 TCTCCCCACTGTGTGCA i colAng1.NW_012118821v1 C 0 I 10 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e chlSab2.chr14 1549054 143 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1514850 1 + 111504155 I a score=6201.000000 s hg38.chr2_KI270774v1_alt 206882 34 + 223625 GCCTCCCCAAATCCCACCCACTGTGTGCAACCTC s cerAty1.NW_012000820v1 1475179 33 - 10304083 ACCTCCCCAAATCCC-CCCACTGTGTGCAACCTC i cerAty1.NW_012000820v1 C 0 T 147 s manLeu1.NW_012103754v1 1048093 33 - 2200435 ACCCACCCAAATCCG-CCCACTGTCTTCAACCCC i manLeu1.NW_012103754v1 C 0 I 3 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e chlSab2.chr14 1549054 143 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1514850 1 + 111504155 I a score=1079.000000 s hg38.chr2_KI270774v1_alt 206916 16 + 223625 AGGTCCCCCACTGTGT s manLeu1.NW_012103754v1 1048129 16 - 2200435 AATCCCCCCACTGTGT i manLeu1.NW_012103754v1 I 3 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e chlSab2.chr14 1549054 143 - 107702431 T e cerAty1.NW_012000820v1 1475212 147 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1514850 1 + 111504155 I a score=17379.000000 s hg38.chr2_KI270774v1_alt 206932 74 + 223625 GCAACCCCCCCAATCCCCCTACTGTGTGTAACCTCCTCAAATCCGCTCACTGTGTGCAACCTCCTCAAATCCCC s cerAty1.NW_012000820v1 1475065 74 - 10304083 GCAACACCCTCAAATCCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTGTGCAACCTCCCCAAATCCCC i cerAty1.NW_012000820v1 T 147 C 0 s manLeu1.NW_012103754v1 1048145 74 - 2200435 GCAACCCCCTAAATCCCCCTACTGTGTGCAACCTCCTCAAGTCCCCCCACTGTGTGCAACCTCCTCAAGTCCCC i manLeu1.NW_012103754v1 C 0 T 77 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e chlSab2.chr14 1549054 143 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1514850 1 + 111504155 I a score=6191.000000 s hg38.chr2_KI270774v1_alt 207006 76 + 223625 CTACTGCCTGCAACCTCCTCAAATCCCCCCACTGTGGGCAACCTCCCCAAATCCCCCCACTGTGTGCAAACTCCCC s cerAty1.NW_012000820v1 1475139 76 - 10304083 CCACTGTATGCAACCTCCCCAAATCCCCCCACTGTATGCAACCTCCCCAAATCCCCCCACTGTGTGCAACCTCCCC i cerAty1.NW_012000820v1 C 0 T 225 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 77 - 2200435 T e chlSab2.chr14 1549054 143 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1514850 1 + 111504155 I a score=0.000000 s hg38.chr2_KI270774v1_alt 207082 249 + 223625 ACATTCCCCCCAGTGTGTGCAACCTTTACAACTCTACTCACTGTGAGCAACCTCCCCAAATCGCCCCACTATGAGCAGCCTCCTCAAATCCCCCAACTGTGTGCCACTTCCCCAAATCCCCACATTCTGAGCAACCTCCCCAAATCCCCCCACTGTGATGTAACCTCCTCAAATTGCCCGCACTGTACAACCTCCTCAAATCTCCCCCGCTGTGTGCAACCTCCTCAAATCCCGACTCTGTGCAACCTC e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 77 - 2200435 T e chlSab2.chr14 1549054 143 - 107702431 T e cerAty1.NW_012000820v1 1475215 225 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1514850 1 + 111504155 I a score=3240.000000 s hg38.chr2_KI270774v1_alt 207331 36 + 223625 CCCAAATCCCCCCAGTGTGTGCAACCTCCCCAAATC s cerAty1.NW_012000820v1 1474990 36 - 10304083 CCCAAATCCCCCCACTGTGTGCAACCTCCCCAAATC i cerAty1.NW_012000820v1 T 225 I 57 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 77 - 2200435 T e chlSab2.chr14 1549054 143 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1514850 1 + 111504155 I a score=0.000000 s hg38.chr2_KI270774v1_alt 207367 61 + 223625 CACCCAACTCTGAGCAACCTCGCCAAATCCCCCAACTCTGTGCAACCTCCCCCTATCCCTC e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 77 - 2200435 T e chlSab2.chr14 1549054 143 - 107702431 T e cerAty1.NW_012000820v1 1475026 57 - 10304083 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1514850 1 + 111504155 I a score=2088.000000 s hg38.chr2_KI270774v1_alt 207428 23 + 223625 CCACTGTGTGCAACCCCCCCAAA s cerAty1.NW_012000820v1 1475083 23 - 10304083 CCACTGTGTGCAACCTCCCCAAA i cerAty1.NW_012000820v1 I 57 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 77 - 2200435 T e chlSab2.chr14 1549054 143 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1514850 1 + 111504155 I a score=5813.000000 s hg38.chr2_KI270774v1_alt 207451 21 + 223625 TCCCCCTACTGTGTGCAACCT s panTro5.chr2A 1514851 21 + 111504155 TCCCCCTACTGTGTGCAACCT i panTro5.chr2A I 1 I 2 s cerAty1.NW_012000820v1 1475106 21 - 10304083 TCCCCCCACTGTGTGCAACCT i cerAty1.NW_012000820v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 77 - 2200435 T e chlSab2.chr14 1549054 143 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T a score=580.000000 s hg38.chr2_KI270774v1_alt 207472 14 + 223625 GCTCAAATCCCCAA s cerAty1.NW_012000820v1 1475127 14 - 10304083 CCCCAAATCCCCCC i cerAty1.NW_012000820v1 C 0 T 61 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 77 - 2200435 T e chlSab2.chr14 1549054 143 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1514872 2 + 111504155 I a score=0.000000 s hg38.chr2_KI270774v1_alt 207486 156 + 223625 ACTGTGTGCAACCTCCCCAAATCACCCTCACTGTGTGCAACCTCCTCAAGTCCCCCACTGTGTGCAATCCGCCCAAGTCCCCCCACTGTGCAACCTGCTCAAATCCCCTCACTGTGTGCAACCTCCCCAAATCCCTCACACTGGGTGCAACCTCCT e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 77 - 2200435 T e chlSab2.chr14 1549054 143 - 107702431 T e cerAty1.NW_012000820v1 1475141 61 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1514872 2 + 111504155 I a score=2795.000000 s hg38.chr2_KI270774v1_alt 207642 35 + 223625 CAAATCCCC-TACTCTGTGGAACCTCCTCAAATCCC s panTro5.chr2A 1514874 36 + 111504155 CAAATCCCCGTACTCTGTGGAACCTCCTCAGATCCC i panTro5.chr2A I 2 I 47 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 77 - 2200435 T e chlSab2.chr14 1549054 143 - 107702431 T e cerAty1.NW_012000820v1 1475141 61 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T a score=0.000000 s hg38.chr2_KI270774v1_alt 207677 80 + 223625 CCCCACTGTGTGCCTCCTCAAATCCCCTCACTATGTGCAACTCCACCAAATCTCCCCCACTGTGAGCAAAACCACAAATC e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 77 - 2200435 T e chlSab2.chr14 1549054 143 - 107702431 T e cerAty1.NW_012000820v1 1475141 61 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1514910 47 + 111504155 I a score=6754.000000 s hg38.chr2_KI270774v1_alt 207757 83 + 223625 CCCCCAATGTGTGCAACTTCCTCAAATCCCCCCACTGTGTGCAACCTCCCCAAAACCCCCCACTGTTTGCAACACCCCCAAAT s cerAty1.NW_012000820v1 1475080 83 - 10304083 CCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTATGCAACCTCCCCAAAT i cerAty1.NW_012000820v1 T 61 T 133 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 77 - 2200435 T e chlSab2.chr14 1549054 143 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1514910 47 + 111504155 I a score=0.000000 s hg38.chr2_KI270774v1_alt 207840 262 + 223625 TTCCCCCACTGTGAGCAAACCCCCAAAACCCCCACTGGGTACAACCTCCTCAAATCCCCCCACTGTGTGTAACCTCCCAAAATCCCCCCACTGTGTGCAAACCCCCCAAATCTCCCTATGACCAAAACCACAAATCCCCCCACTGTGTGCAACCTCCTCAAATCCCCCCAATGTGTGCAAGCCCCAAAATCCCACCCACTATGTGCAACCTCCCCCAAATCCCCCCGACTCTGTGCAAACTCCCCAAATCACCCCCACTCTG e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 77 - 2200435 T e chlSab2.chr14 1549054 143 - 107702431 T e cerAty1.NW_012000820v1 1475163 133 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1514910 47 + 111504155 I a score=4112.000000 s hg38.chr2_KI270774v1_alt 208102 62 + 223625 CAAACTCCCCAAATCTCACCCCACTGTGGGCAACCACACTAAATCCCGCCACTGTGTGCAAC s panTro5.chr2A 1514957 62 + 111504155 CAAACTCCCCACATCTCCACCCACTGAGTACAACCTCACTAAATCCCCCCACTGTGAGCAAC i panTro5.chr2A I 47 I 75 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 77 - 2200435 T e chlSab2.chr14 1549054 143 - 107702431 T e cerAty1.NW_012000820v1 1475163 133 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T a score=0.000000 s hg38.chr2_KI270774v1_alt 208164 37 + 223625 CTCACCAAATTTCCCCGTGTGCAACCTACCCAAATGC e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 77 - 2200435 T e chlSab2.chr14 1549054 143 - 107702431 T e cerAty1.NW_012000820v1 1475163 133 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515019 75 + 111504155 I a score=2670.000000 s hg38.chr2_KI270774v1_alt 208201 29 + 223625 CCCCCACTCTGTGCAACCTCCCAAAATCC s panTro5.chr2A 1515094 29 + 111504155 CCCCCACTCTGTGCAACCTCCCGAAATCC i panTro5.chr2A I 75 I 37 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 77 - 2200435 T e chlSab2.chr14 1549054 143 - 107702431 T e cerAty1.NW_012000820v1 1475163 133 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T a score=0.000000 s hg38.chr2_KI270774v1_alt 208230 33 + 223625 CCCACAATGTGTGCAAACTCCTCAAATCCCAAT e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 77 - 2200435 T e chlSab2.chr14 1549054 143 - 107702431 T e cerAty1.NW_012000820v1 1475163 133 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515123 37 + 111504155 I a score=4368.000000 s hg38.chr2_KI270774v1_alt 208263 55 + 223625 ACTGTGTGCAACCTCCTCAAATCCCCCCACTGTGCGCAACCTCCTCATATCCCCC s cerAty1.NW_012000820v1 1475030 55 - 10304083 ACTGTGTGCAACCTCCCCAGATCCCCCCACTGTGTGCAACACCCTCAAATCCCCC i cerAty1.NW_012000820v1 T 133 T 95 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 77 - 2200435 T e chlSab2.chr14 1549054 143 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515123 37 + 111504155 I a score=0.000000 s hg38.chr2_KI270774v1_alt 208318 16 + 223625 GACTGTTTACAACCTT e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 77 - 2200435 T e chlSab2.chr14 1549054 143 - 107702431 T e cerAty1.NW_012000820v1 1475085 95 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515123 37 + 111504155 I a score=733.000000 s hg38.chr2_KI270774v1_alt 208334 9 + 223625 CCCAAATCT s cerAty1.NW_012000820v1 1474990 9 - 10304083 CCCAAATCC i cerAty1.NW_012000820v1 T 95 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 77 - 2200435 T e chlSab2.chr14 1549054 143 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515123 37 + 111504155 I a score=18161.000000 s hg38.chr2_KI270774v1_alt 208343 74 + 223625 CCCCACTGTGAGCAACCTCCCCAAATCCCCCACTGTGTGCAACCTCCCCAAATCCGCCCACTGTGTGCAACCTC s cerAty1.NW_012000820v1 1474999 74 - 10304083 CCCCACTGTGTGCAACCTCCCCAAATCCTCCACTGTGTGCAACCTCCCCAGATCCCCCCACTGTGTGCAACACC i cerAty1.NW_012000820v1 C 0 T 83 s chlSab2.chr14 1548911 74 - 107702431 CCCCACTGTGTGCAACGCCCTCAAATCCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTGTGCAGCCTC i chlSab2.chr14 T 143 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 77 - 2200435 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515123 37 + 111504155 I a score=7286.000000 s hg38.chr2_KI270774v1_alt 208417 26 + 223625 CCCAAATCCCCCCACTGTGCGCAACC s cerAty1.NW_012000820v1 1474990 26 - 10304083 CCCAAATCCCCCCACTGTGTGCAACC i cerAty1.NW_012000820v1 T 83 C 0 s chlSab2.chr14 1548985 26 - 107702431 CCCAAATCCCCCCACTGTGTGCAACC i chlSab2.chr14 C 0 T 28 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 77 - 2200435 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515123 37 + 111504155 I a score=3494.000000 s hg38.chr2_KI270774v1_alt 208443 13 + 223625 TCCCCAAATCCTC s cerAty1.NW_012000820v1 1475016 13 - 10304083 TCCCCAAATCCTC i cerAty1.NW_012000820v1 C 0 I 82 s chlSab2.chr14 1548983 13 - 107702431 TCCCCAAATCCCC i chlSab2.chr14 T 28 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 77 - 2200435 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515123 37 + 111504155 I a score=2972.000000 s hg38.chr2_KI270774v1_alt 208456 49 + 223625 CCACTGTGCGCAACCTCCCCAAATCCCCCCGACTCTGTGCAACCTCCCC s cerAty1.NW_012000820v1 1475111 18 - 10304083 CCACTGTGTGCAACCTCC------------------------------- i cerAty1.NW_012000820v1 I 82 C 0 s chlSab2.chr14 1548996 47 - 107702431 CCACTGTGTGCAACCCCC-CAAATCTCCCC-ACTGTTTGCAACCCCCCC i chlSab2.chr14 C 0 I 22 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 77 - 2200435 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515123 37 + 111504155 I a score=0.000000 s hg38.chr2_KI270774v1_alt 208505 10 + 223625 CATCCCTCCA e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 77 - 2200435 T e chlSab2.chr14 1549043 22 - 107702431 I e cerAty1.NW_012000820v1 1475129 0 - 10304083 C e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515123 37 + 111504155 I a score=664.000000 s hg38.chr2_KI270774v1_alt 208515 7 + 223625 TGTGCAA s manLeu1.NW_012103754v1 1048142 7 - 2200435 TGTGCAA i manLeu1.NW_012103754v1 T 77 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e chlSab2.chr14 1549043 22 - 107702431 I e cerAty1.NW_012000820v1 1475129 0 - 10304083 C e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515123 37 + 111504155 I a score=30949.000000 s hg38.chr2_KI270774v1_alt 208522 70 + 223625 ACCTCCAAATCCCCCCACTGTGTGCAACCTCCTC-------------------------AAATCCCCCCACTGTGTGCAACCTCCTCAAATCCCC s cerAty1.NW_012000820v1 1475129 66 - 10304083 ----CCAAATCCCCCCACTGTATGCAACCTCCCC-------------------------AAATCCCCCCACTGTATGCAACCTCCCCAAATCCCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1549065 95 - 107702431 ACACCCAAATCCCCCCACTGTGTGCAACCCCCTCAAATCCCCACCGTGTGCAACCCCCTAAATCCCCCCACTGTGTGCAACCTCCTCAAATCCCC i chlSab2.chr14 I 22 T 276 s manLeu1.NW_012103754v1 1048149 70 - 2200435 CCCCCTAAATCCCCCTACTGTGTGCAACCTCCTC-------------------------AAGTCCCCCCACTGTGTGCAACCTCCTCAAGTCCCC i manLeu1.NW_012103754v1 C 0 T 1175 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515123 37 + 111504155 I a score=1010.000000 s hg38.chr2_KI270774v1_alt 208592 14 + 223625 CCGATGTGTGCAAC s cerAty1.NW_012000820v1 1475195 14 - 10304083 CCACTGTGTGCAAC i cerAty1.NW_012000820v1 C 0 T 180 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 1175 - 2200435 T e chlSab2.chr14 1549160 276 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515123 37 + 111504155 I a score=0.000000 s hg38.chr2_KI270774v1_alt 208606 524 + 223625 ACCCCCAAGTCCCCCCCACTGTGAGCAACCACCCCAGTCCCCCCACAGTGTGCAAACACCCCACATCTCCCCCACTGTGAGCAAAACCACAAATCCCCCCAGTGTGTGCAACCTCAATTCCCCCCACTGTGTGCAACCCCCCAAATGCCCCCCAATGTGAGCAACCCCCCCAAATCAACATGCTGTGTGAAACCTCAAATCCCCCAACTGTGTGCAACCTCCCCAAATCCCCTCCACTGTGTGCAACCTCAAGTCCGCCACTGTGTGCAACCCCCGCAAATCCTCCCAGTGTTCGCAACCTCCTCAAATCCTCTCACTGTGTGCAACCTTCTCAAATCCCACGCCACTGTGAGCAACCTCCACAAATCCCCCCAACTCTGTGCAACCTCCCCAAATCTCCCCAGTGTGTGCAACTTCCCTAAATCCCCCAAACTGTGTTCATCCTCCCCAAATCCCCCCCCCACTGTATGCAACCTCCCCAAATCCCACCTAATGTGTGCAACATCCTCAAATCCCCACCACTC e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 1175 - 2200435 T e chlSab2.chr14 1549160 276 - 107702431 T e cerAty1.NW_012000820v1 1475209 180 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515123 37 + 111504155 I a score=2319.000000 s hg38.chr2_KI270774v1_alt 209130 24 + 223625 TGTGCAACCTCCCCAAATCCCCCC s panTro5.chr2A 1515160 24 + 111504155 TGTGCAACCTCCCCAAATCCCCCC i panTro5.chr2A I 37 I 2 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 1175 - 2200435 T e chlSab2.chr14 1549160 276 - 107702431 T e cerAty1.NW_012000820v1 1475209 180 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T a score=0.000000 s hg38.chr2_KI270774v1_alt 209154 200 + 223625 CAATCTATGCAACCTCCCCAAATCCCCCCCAATCTATGCAACCTCCCCAAATCCTCCCCACTCTGTGCAACCTCCCCAAATCCCCTGCTTTGTGGGCAATGTCACAAAATCCCCCGGTGTGTGCAACCTCCCCAAATCCCCTCCACTCTGTGCAACCTCCACAAATCCCCCACACTCTGTGCAACCTACTCAAATCCCCA e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 1175 - 2200435 T e chlSab2.chr14 1549160 276 - 107702431 T e cerAty1.NW_012000820v1 1475209 180 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515184 2 + 111504155 I a score=2548.000000 s hg38.chr2_KI270774v1_alt 209354 29 + 223625 CACTGTGTGCAACCTCCTCAAATCCCCCC s cerAty1.NW_012000820v1 1475029 29 - 10304083 CACTGTGTGCAACCTCCCCAGATCCCCCC i cerAty1.NW_012000820v1 T 180 I 27 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 1175 - 2200435 T e chlSab2.chr14 1549160 276 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515184 2 + 111504155 I a score=0.000000 s hg38.chr2_KI270774v1_alt 209383 1 + 223625 C e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 1175 - 2200435 T e chlSab2.chr14 1549160 276 - 107702431 T e cerAty1.NW_012000820v1 1475058 27 - 10304083 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515184 2 + 111504155 I a score=8494.000000 s hg38.chr2_KI270774v1_alt 209384 107 + 223625 ACTGTGTGCAACCTCCTCAAATCCCCCCACTGTGAGCAACCTCCTCAAATCCCCTCACTGTGTGCCACCTCCCCAAATCCCCCCACTTTCTGCAACCTCCGCAAATA s cerAty1.NW_012000820v1 1475085 107 - 10304083 ACTGTGTGCAACCTCCCCAAATCCCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTATGCAACCTCCCCAAATCCCCCCACTGTATGCAACCTCCCCAAATC i cerAty1.NW_012000820v1 I 27 T 112 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 1175 - 2200435 T e chlSab2.chr14 1549160 276 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515184 2 + 111504155 I a score=10969.000000 s hg38.chr2_KI270774v1_alt 209491 135 + 223625 CCCCCACTGTGTGCAACCTCCTCAAATCCCCCCACTCTGTGCAACCTCCCCTATCCCTCCCACTGTGTGCAACCGCCCCAAATCCCCCAACTATATGCAACCTACTCAAATCCCCCCACTGTGTGCAACCTCCCC s cerAty1.NW_012000820v1 1475080 135 - 10304083 CCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTATGCAACCTCCCCAAATCCCCCCACTGTATGCAACCTCCCCAAATCCCCCCACTGTGTGCAACCTCCCC i cerAty1.NW_012000820v1 T 112 T 130 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 1175 - 2200435 T e chlSab2.chr14 1549160 276 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515184 2 + 111504155 I a score=0.000000 s hg38.chr2_KI270774v1_alt 209626 603 + 223625 AAAACCCCCACTGTGAGCAACCTCCCCAAATCCCCTCACTGTGTAACCTCCCCAAATCCCCTCACTGTGTAACCTCCCAAAATACCCCCCGTGAGCAACCTCCCCAAATCCCCGCACTGTGTGCAACCACCCCAAATCCCCCCCACTGTGTGCAACCTCCTCAAATCCTCCGCCACTGTGAGCAACCTCCTCAAATACCCCACTGTGTGCAACCTCCTCAAATCCCCCCATCTGTGTGCGACCTCCCCAAATCCTCCCAGTGTGTGCAACTTCCCTAAATCCCTCCAACTGTGTTCAGCTTCCCCAAATACCAACTGTGTGCAACCTCCTCACATCCCCACCACTCTGTGCAACCTCTCCAAGTCACCCCTACTCTCTGCAGACTCCCCAAATCCCCCCCCAATCTGTGCAACCTCCCCAAATCCCACCCAATTGTGGGCAACCACACAAAATCCCGCCACTGTGTGCAACCTCACCAAATTTCTCCCACTCTGGGCAACCTCCCCAAATCCCCCCCACTCTGTGCAACCTCCCAAAATCCCACACACTGTATGCAACCTCCTCAAATCCCCATACTGTGTGCAACCTCCTCAAATCCCCCCC e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 1175 - 2200435 T e chlSab2.chr14 1549160 276 - 107702431 T e cerAty1.NW_012000820v1 1475215 130 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515184 2 + 111504155 I a score=4504.000000 s hg38.chr2_KI270774v1_alt 210229 53 + 223625 ACTGTGTTCAACCTCCTCAAATCCCCCCACTGCGTGCAACCTCCTCAAATCCC s cerAty1.NW_012000820v1 1475085 53 - 10304083 ACTGTGTGCAACCTCCCCAAATCCCCCCACTGTGTGCAACCTCCCCAAATCCC i cerAty1.NW_012000820v1 T 130 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 1175 - 2200435 T e chlSab2.chr14 1549160 276 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515184 2 + 111504155 I a score=900.000000 s hg38.chr2_KI270774v1_alt 210282 3 + 223625 CCC s cerAty1.NW_012000820v1 1475138 3 - 10304083 CCC i cerAty1.NW_012000820v1 C 0 T 111 s chlSab2.chr14 1548884 3 - 107702431 CCC i chlSab2.chr14 T 276 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 1175 - 2200435 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515184 2 + 111504155 I a score=29636.000000 s hg38.chr2_KI270774v1_alt 210285 124 + 223625 AATGTGAGCAACCTCCTCAAATCCCCCCACTGCGTGCAACCTCCTCAAATACCCCACTGCGTGCAACCTCCTCAAATCCCCCCAATGTGAGGAACCTCCTCAAATCCTCCCACTATGTGCAACC s cerAty1.NW_012000820v1 1475030 124 - 10304083 ACTGTGTGCAACCTCCCCAGATCCCCCCACTGTGTGCAACACCCTCAAATCCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTATGCAACC i cerAty1.NW_012000820v1 T 111 C 0 s chlSab2.chr14 1548887 124 - 107702431 ACTGTGTGCAGCCTCCCCAAATCCCCCCACTGTGTGCAACGCCCTCAAATCCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTGTGCAGCCTCCCCAAATCCCCCCACTGTGTGCAACC i chlSab2.chr14 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 1175 - 2200435 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515184 2 + 111504155 I a score=91.000000 s hg38.chr2_KI270774v1_alt 210409 1 + 223625 T s cerAty1.NW_012000820v1 1475154 1 - 10304083 T i cerAty1.NW_012000820v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 1175 - 2200435 T e chlSab2.chr14 1549011 0 - 107702431 C e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515184 2 + 111504155 I a score=6767.000000 s hg38.chr2_KI270774v1_alt 210410 28 + 223625 CCTCAAATCTCCCCACTGTGTGCAACCC s cerAty1.NW_012000820v1 1475155 28 - 10304083 CCCCAAATCCCCCCACTGTATGCAACCT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1549011 28 - 107702431 CCCCAAATCTCCCCACTGTTTGCAACCC i chlSab2.chr14 C 0 T 102 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 1175 - 2200435 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515184 2 + 111504155 I a score=742.000000 s hg38.chr2_KI270774v1_alt 210438 9 + 223625 CCCCAGATC s cerAty1.NW_012000820v1 1475183 9 - 10304083 CCCCAAATC i cerAty1.NW_012000820v1 C 0 T 80 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 1175 - 2200435 T e chlSab2.chr14 1549039 102 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515184 2 + 111504155 I a score=0.000000 s hg38.chr2_KI270774v1_alt 210447 112 + 223625 TCCCCCACTGTGAGCAAAAGCACAAATCCCCCACTGTGTGCAACATTCCTCAAATCCCCGCACTGTGTGCAACCCAACCAAATCTCACCCACTGTGAGCAAACCCCCACATC e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 1175 - 2200435 T e chlSab2.chr14 1549039 102 - 107702431 T e cerAty1.NW_012000820v1 1475192 80 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515184 2 + 111504155 I a score=6881.000000 s hg38.chr2_KI270774v1_alt 210559 84 + 223625 CCCCCACTGTGTGCAACCTCCTCCAATCCCCCCACTGTGTGAAACCTCCCCAAATCCCCCCAATGTAGGCAACCCCCCAAATCT s chlSab2.chr14 1548937 84 - 107702431 CCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTGTGCAGCCTCCCCAAATCCCCCCACTGTGTGCAACCCCCCAAATCT i chlSab2.chr14 T 102 T 137 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 1175 - 2200435 T e cerAty1.NW_012000820v1 1475192 80 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515184 2 + 111504155 I a score=0.000000 s hg38.chr2_KI270774v1_alt 210643 382 + 223625 CCCCCACAGTGAGCAAAAACACAAATTCCCCCACTGTGTGCAACCTCCACAAATCCTCCCAAGTCTGCAACCCCCCAAGTCCCCCCATTGTGAGCAACCACCCCAAATCCCGCCACTGTGTGCAACCTCCTCAAATCACCCGGTGTGCAACCTGCTCAAATCCCCCCACTGTGTGCAACCTCCTCAAATCTCTCAACTGTGTGCAACCTCCTCAAATCCCCCCTTCTGTGCAATTTCCCCAAATTCCAACTGTGTACAACCTCCTCAAATCCCTCCCACTCTTTGCAAACTCCCCAAATCGCCCCACTCTGTGCAACCGCCCCAAATCTACCCCAGTCTGTGAAACCTCCCCAAATCCCCCCCACTGTGTGCAACCTCACCA e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 1175 - 2200435 T e chlSab2.chr14 1549021 137 - 107702431 T e cerAty1.NW_012000820v1 1475192 80 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488760 122 + 114371477 T e panTro5.chr2A 1515184 2 + 111504155 I a score=4255.000000 s hg38.chr2_KI270774v1_alt 211025 66 + 223625 CATCCACCACTGTGTGCAACCTCCCCAAATCCCCCCTACCTTGTGCAACCTCCCCAAATCCCACCC s panPan2.chr2A 1488638 66 + 114371477 TTTCCCCCACTCTGTGCAACCTCCCGAAATCCACCCCACCGTGTGCAACGTCCCCAAATCCCCCCT i panPan2.chr2A T 122 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 1175 - 2200435 T e chlSab2.chr14 1549021 137 - 107702431 T e cerAty1.NW_012000820v1 1475192 80 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515184 2 + 111504155 I a score=7091.000000 s hg38.chr2_KI270774v1_alt 211091 27 + 223625 ACTCTGTGCAACCTCCCCAAATCCCCC s panTro5.chr2A 1515186 27 + 111504155 ACTCTGTGCAACCTCCCCAAATCCCCC i panTro5.chr2A I 2 I 49 s panPan2.chr2A 1488704 27 + 114371477 ACTCTGTGCAACCTCCTGAAATCCCCC i panPan2.chr2A C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 1175 - 2200435 T e chlSab2.chr14 1549021 137 - 107702431 T e cerAty1.NW_012000820v1 1475192 80 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M a score=-114.000000 s hg38.chr2_KI270774v1_alt 211118 1 + 223625 A s panPan2.chr2A 1488731 1 + 114371477 C i panPan2.chr2A C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 1175 - 2200435 T e chlSab2.chr14 1549021 137 - 107702431 T e cerAty1.NW_012000820v1 1475192 80 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515213 49 + 111504155 I a score=7626.000000 s hg38.chr2_KI270774v1_alt 211119 29 + 223625 CACTGTGTGCAGCCTCCTCAAATCCCCCC s panPan2.chr2A 1488732 29 + 114371477 CACTGTGTGCAACCTTCTCAAATCCCCCC i panPan2.chr2A C 0 T 402 s cerAty1.NW_012000820v1 1475112 29 - 10304083 CACTGTGTGCAACCTCCCCAAATCCCCCC i cerAty1.NW_012000820v1 T 80 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 1175 - 2200435 T e chlSab2.chr14 1549021 137 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515213 49 + 111504155 I a score=1934.000000 s hg38.chr2_KI270774v1_alt 211148 25 + 223625 ACTGTGTGCAACCTCCTCCAATCCC s cerAty1.NW_012000820v1 1475141 25 - 10304083 ACTGTATGCAACCTCCCCAAATCCC i cerAty1.NW_012000820v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1048219 1175 - 2200435 T e chlSab2.chr14 1549021 137 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488761 402 + 114371477 T e panTro5.chr2A 1515213 49 + 111504155 I a score=12963.000000 s hg38.chr2_KI270774v1_alt 211173 26 + 223625 CCCACTGTGAGCAACCTCCCCAAATC s cerAty1.NW_012000820v1 1475166 26 - 10304083 CCCACTGTATGCAACCTCCCCAAATC i cerAty1.NW_012000820v1 C 0 T 134 s chlSab2.chr14 1548884 26 - 107702431 CCCACTGTGTGCAGCCTCCCCAAATC i chlSab2.chr14 T 137 C 0 s manLeu1.NW_012103754v1 1047044 26 - 2200435 CCCACTGTGTGCAACCTCCCCAAATA i manLeu1.NW_012103754v1 T 1175 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488761 402 + 114371477 T e panTro5.chr2A 1515213 49 + 111504155 I a score=976.000000 s hg38.chr2_KI270774v1_alt 211199 5 + 223625 CTCCT s chlSab2.chr14 1548910 5 - 107702431 CCCCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1047070 5 - 2200435 CCCCC i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e cerAty1.NW_012000820v1 1475192 134 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488761 402 + 114371477 T e panTro5.chr2A 1515213 49 + 111504155 I a score=21857.000000 s hg38.chr2_KI270774v1_alt 211204 51 + 223625 ACTGTGTGCAACCTCCTCAAATCCCCCACTGTGTGCAACCTCCCCAAA-TC-C s cerAty1.NW_012000820v1 1475058 51 - 10304083 ACTGTGTGCAACACCCTCAAATCCCCCACTGTGTGCAACCTCCCCAAA-TCC- i cerAty1.NW_012000820v1 T 134 T 53 s chlSab2.chr14 1548915 50 - 107702431 ACTGTGTGCAACGCCCTCAAATCCCCCACTGTGTGCAACCTCCCCAAA-TC-- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1047075 51 - 2200435 ACTGTCTGCAACCCCCTCAAATCCCCCACTGTGTGCAACCCACCCAAATTC-- i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488761 402 + 114371477 T e panTro5.chr2A 1515213 49 + 111504155 I a score=376.000000 s hg38.chr2_KI270774v1_alt 211255 3 + 223625 TCT s chlSab2.chr14 1548965 3 - 107702431 CCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1047126 3 - 2200435 CCC i manLeu1.NW_012103754v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e cerAty1.NW_012000820v1 1475109 53 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488761 402 + 114371477 T e panTro5.chr2A 1515213 49 + 111504155 I a score=7668.000000 s hg38.chr2_KI270774v1_alt 211258 15 + 223625 CCACTGTGTGCAACC s cerAty1.NW_012000820v1 1475056 15 - 10304083 CCACTGTGTGCAACA i cerAty1.NW_012000820v1 T 53 C 0 s chlSab2.chr14 1548968 15 - 107702431 CCACTGTGTGCAGCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1047129 15 - 2200435 CCACTGTGTGCAACC i manLeu1.NW_012103754v1 C 0 I 1078 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488761 402 + 114371477 T e panTro5.chr2A 1515213 49 + 111504155 I a score=1396.000000 s hg38.chr2_KI270774v1_alt 211273 9 + 223625 TCCTCACGT s cerAty1.NW_012000820v1 1475071 9 - 10304083 CCCTCAAAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1548983 9 - 107702431 TCCCCAAAT i chlSab2.chr14 C 0 T 55 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488761 402 + 114371477 T e panTro5.chr2A 1515213 49 + 111504155 I a score=1746.000000 s hg38.chr2_KI270774v1_alt 211282 18 + 223625 CCCCCACTGTGTGCAACC s cerAty1.NW_012000820v1 1475080 18 - 10304083 CCCCCACTGTGTGCAACC i cerAty1.NW_012000820v1 C 0 T 13 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1548992 55 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488761 402 + 114371477 T e panTro5.chr2A 1515213 49 + 111504155 I a score=0.000000 s hg38.chr2_KI270774v1_alt 211300 148 + 223625 CCCACAAATCCTCCCAGTGTGCGCATCCTCCTAAAATCCCCCCACTGTGAGTAACCTCCTAAAATCCCCCCACTGTGAGTAACCTCCTCAAATCCCAACTCTGTGCAACCTCCCCAAATCTCCCCAGTGTGTGCAACTTCCCTAAATC e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1548992 55 - 107702431 T e cerAty1.NW_012000820v1 1475098 13 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488761 402 + 114371477 T e panTro5.chr2A 1515213 49 + 111504155 I a score=591.000000 s hg38.chr2_KI270774v1_alt 211448 6 + 223625 CCCCCA s panPan2.chr2A 1488359 6 + 114371477 CCCCCA i panPan2.chr2A T 402 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1548992 55 - 107702431 T e cerAty1.NW_012000820v1 1475098 13 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515213 49 + 111504155 I a score=4961.000000 s hg38.chr2_KI270774v1_alt 211454 23 + 223625 ACTGTGTTTAACCTCTCCAAATC s panPan2.chr2A 1488365 23 + 114371477 ACTGTGTTCAACACCTCCAAATC i panPan2.chr2A C 0 C 0 s cerAty1.NW_012000820v1 1475085 23 - 10304083 ACTGTGTGCAACCTCCCCAAATC i cerAty1.NW_012000820v1 T 13 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1548992 55 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515213 49 + 111504155 I a score=24825.000000 s hg38.chr2_KI270774v1_alt 211477 50 + 223625 CCCCCACTGTGTGCAACCTCCCCGAATCCCCCCACTGTGTGCAACCTCCC s panPan2.chr2A 1488388 50 + 114371477 CCCCCATTGTGTGCAAACTCCTCAAATCACCCCGCTGTGTGCAACATCCC i panPan2.chr2A C 0 C 0 s cerAty1.NW_012000820v1 1475108 50 - 10304083 CCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTATGCAACCTCCC i cerAty1.NW_012000820v1 C 0 T 73 s chlSab2.chr14 1548937 50 - 107702431 CCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTGTGCAGCCTCCC i chlSab2.chr14 T 55 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515213 49 + 111504155 I a score=5016.000000 s hg38.chr2_KI270774v1_alt 211527 24 + 223625 TGAATCCCCCC--ACTGTGTGCAGCC s panPan2.chr2A 1488438 26 + 114371477 CAGATCCCCCCCCACTGTGTGCAACC i panPan2.chr2A C 0 C 0 s chlSab2.chr14 1548987 24 - 107702431 CAAATCCCCCC--ACTGTGTGCAACC i chlSab2.chr14 C 0 I 36 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e cerAty1.NW_012000820v1 1475158 73 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515213 49 + 111504155 I a score=2036.000000 s hg38.chr2_KI270774v1_alt 211551 39 + 223625 TCTCCAAATCCCCCCCACTCTGTGCAACCTCCTCAAATC s panPan2.chr2A 1488464 38 + 114371477 TCCGCAAATCCCCGT-ACTCTGTGGAACCTCCCCAGATC i panPan2.chr2A C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549011 36 - 107702431 I e cerAty1.NW_012000820v1 1475158 73 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515213 49 + 111504155 I a score=-196.000000 s hg38.chr2_KI270774v1_alt 211590 34 + 223625 CCCCCCACTGTGTGCAACCGTGCTAAATCCCCCC s panPan2.chr2A 1488502 3 + 114371477 CCA------------------------------- i panPan2.chr2A C 0 C 0 s chlSab2.chr14 1549047 34 - 107702431 CCCCCCACTGTGTGCAACACACCCAAATCCCCCC i chlSab2.chr14 I 36 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e cerAty1.NW_012000820v1 1475158 73 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515213 49 + 111504155 I a score=5818.000000 s hg38.chr2_KI270774v1_alt 211624 28 + 223625 ACTCTGTGCAACCTCCTCAAATCCCCCC s cerAty1.NW_012000820v1 1475085 28 - 10304083 ACTGTGTGCAACCTCCCCAAATCCCCCC i cerAty1.NW_012000820v1 T 73 T 83 s chlSab2.chr14 1549081 26 - 107702431 ACTGTGTGCAACCCCCTCAAATCCCC-- i chlSab2.chr14 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488505 0 + 114371477 C e panTro5.chr2A 1515213 49 + 111504155 I a score=6468.000000 s hg38.chr2_KI270774v1_alt 211652 13 + 223625 ACTGTGTGCAACC s panPan2.chr2A 1488505 13 + 114371477 ACTGTGAGCAACC i panPan2.chr2A C 0 C 0 s cerAty1.NW_012000820v1 1475030 13 - 10304083 ACTGTGTGCAACC i cerAty1.NW_012000820v1 T 83 C 0 s chlSab2.chr14 1549107 13 - 107702431 ACCGTGTGCAACC i chlSab2.chr14 C 0 T 81 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515213 49 + 111504155 I a score=273.000000 s hg38.chr2_KI270774v1_alt 211665 1 + 223625 T s panPan2.chr2A 1488518 1 + 114371477 T i panPan2.chr2A C 0 C 0 s cerAty1.NW_012000820v1 1475043 1 - 10304083 T i cerAty1.NW_012000820v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549120 81 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515213 49 + 111504155 I a score=4772.000000 s hg38.chr2_KI270774v1_alt 211666 37 + 223625 CCCCAAATCCCCCCACTGTGTGCAACGTCCCCAAAT-T s panPan2.chr2A 1488519 10 + 114371477 CCCCACATC----------------------------T i panPan2.chr2A C 0 C 0 s cerAty1.NW_012000820v1 1475044 36 - 10304083 CCCCAGATCCCCCCACTGTGTGCAACACCCTCAAAT-- i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1549039 37 - 107702431 CCCCAAATCCCCCCACTGTGTGCAACACACCCAAATC- i chlSab2.chr14 T 81 T 55 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515213 49 + 111504155 I a score=300.000000 s hg38.chr2_KI270774v1_alt 211703 1 + 223625 C s panPan2.chr2A 1488529 1 + 114371477 C i panPan2.chr2A C 0 C 0 s cerAty1.NW_012000820v1 1475080 1 - 10304083 C i cerAty1.NW_012000820v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549076 55 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515213 49 + 111504155 I a score=36755.000000 s hg38.chr2_KI270774v1_alt 211704 82 + 223625 CCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTATGTGCAACGTCCCCAAATCCCCCCACTGTCTGCAACATCCCCAAAT s panPan2.chr2A 1488530 82 + 114371477 CCCCACTGAGTACAACCTCCCCAAATTCCCCCACTGTGAGCAACTTCCCAAAATCCCCCCAGTGTGAGCAATGTCCCCAAAT i panPan2.chr2A C 0 C 0 s cerAty1.NW_012000820v1 1475081 82 - 10304083 CCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTATGCAACCTCCCCAAAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1549021 82 - 107702431 CCCCACTGTTTGCAACCCCCCCAAATCCCCCCACTGTGTGCAACACACCCAAATCCCCCCACTGTGTGCAACCCCCTCAAAT i chlSab2.chr14 T 55 T 166 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515213 49 + 111504155 I a score=11552.000000 s hg38.chr2_KI270774v1_alt 211786 52 + 223625 GCCCCCACTGTGAGCAACCTTCCCAAATCCCCCCACTGTGTGCAATCTCCCC s panPan2.chr2A 1488612 52 + 114371477 CCCCCCACTGTGAGCAACCTGCCCAATTTCCCCCACTCTGTGCAACCTCCCG i panPan2.chr2A C 0 C 0 s cerAty1.NW_012000820v1 1475163 52 - 10304083 CCCCCCACTGTATGCAACCTCCCCAAATCCCCCCACTGTGTGCAACCTCCCC i cerAty1.NW_012000820v1 C 0 T 135 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549103 166 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515213 49 + 111504155 I a score=350.000000 s hg38.chr2_KI270774v1_alt 211838 6 + 223625 ATATCC s panPan2.chr2A 1488664 6 + 114371477 AAATCC i panPan2.chr2A C 0 I 1 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549103 166 - 107702431 T e cerAty1.NW_012000820v1 1475215 135 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515213 49 + 111504155 I a score=0.000000 s hg38.chr2_KI270774v1_alt 211844 191 + 223625 CCCCACTGTGAGCAACCTCCCCAAATCCCACTTGTTGCAACCTCCCCAAATCCCCCCACTGTGAGCAATCTCCCCAAATGCCCCACCGTGTGCAACCTCCTCAAATCCCCCACCACTCAGAGCAACCTTCTCAAATCCCCCCAATGTGAGCAACCTCCTCAAATCCCCGTACTGTGTGCAACCTCCTATCA e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549103 166 - 107702431 T e cerAty1.NW_012000820v1 1475215 135 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488670 1 + 114371477 I e panTro5.chr2A 1515213 49 + 111504155 I a score=19142.000000 s hg38.chr2_KI270774v1_alt 212035 72 + 223625 CCCCCACTGTGTGCAACCTCCTCAAATCCCCCCACTGCGTGCAACCTCCTCAAATCCCCCCACTGTGAGCAA s cerAty1.NW_012000820v1 1475080 72 - 10304083 CCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTATGCAA i cerAty1.NW_012000820v1 T 135 C 0 s chlSab2.chr14 1548937 72 - 107702431 CCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTGTGCAGCCTCCCCAAATCCCCCCACTGTGTGCAA i chlSab2.chr14 T 166 T 68 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488670 1 + 114371477 I e panTro5.chr2A 1515213 49 + 111504155 I a score=5141.000000 s hg38.chr2_KI270774v1_alt 212107 63 + 223625 TCTCCTCAAATCCCCCCACTGTGTGCAACCTCCTCTAATCCCCCCACTGTGAGCAACCTCCCC s cerAty1.NW_012000820v1 1475152 63 - 10304083 CCTCCCCAAATCCCCCCACTGTATGCAACCTCCCCAAATCCCCCCACTGTGTGCAACCTCCCC i cerAty1.NW_012000820v1 C 0 T 130 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549009 68 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488670 1 + 114371477 I e panTro5.chr2A 1515213 49 + 111504155 I a score=0.000000 s hg38.chr2_KI270774v1_alt 212170 455 + 223625 AAATCCCTCCCATTGTGTGCAGCCTCCCCAAATCCCCCCGACGCTGTGCAACCTCCCAAAATTGCCCCCACTGTGTGCAACCTCCTCAAATCCCTCCCACTCTGTGCAAACTCCCCAAACCCCCCCCTTGCAGCCTCCCCATATCCCCCCAACTCTGTGCAACCTCCCGAAAACACCCCTCACTGTGTGCAACCTCGCCCAATCACGACACTGTGTGCAACCTCCCCAAATCACCCCCACTCTCTGCAACCTCCCCAAGTCTCCCACACTCTGTGCAACCTCCTCAAATCCCCCCACTGTTTGCAACCTCCCAAAATCTCCCTATGCGCAACCTCGCAAAATCTCCCCCACTATGTGCAACCTCCTCAAATCCCCCCACTGTGTCCAACCTCCCCAAATCCCTCCCACTGTGTGCAACCTCCTCTAGTCCCCCACTGTGTGCACCCCCCAAAAAT e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1466993 10 - 13651311 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549009 68 - 107702431 T e cerAty1.NW_012000820v1 1475215 130 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488670 1 + 114371477 I e panTro5.chr2A 1515213 49 + 111504155 I a score=2439.000000 s hg38.chr2_KI270774v1_alt 212625 28 + 223625 CCCCCCACTGTGTGCAACCTCCTCAAAT s colAng1.NW_012118821v1 1467003 28 - 13651311 CCCCCCACTGTGTACAACCCCCTCAAAT i colAng1.NW_012118821v1 I 10 I 6 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549009 68 - 107702431 T e cerAty1.NW_012000820v1 1475215 130 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488670 1 + 114371477 I e panTro5.chr2A 1515213 49 + 111504155 I a score=0.000000 s hg38.chr2_KI270774v1_alt 212653 403 + 223625 CCCCCGCCAGTGTGAGCAACCTCCTAAAATCCCCACACTGTGAGAAACCTCCTCAAATCCCCCCAAGTGTGTGCAACGTCCCCAAATATCCCCAGTGTGTGCAACTTCCCTAAATCCCCTAAACTGTATTCAACCTCTCCAAATCCCCACCACTGTGTGCAACCTCCCGAAATCCCATCAACTGTGTGCAACATCCTCAAATCCCCCTCACTCTGTGCAACCTCCCCAAATCTCCCCCACTCTGTGCAACCCCCCCAAATCCCCCCCATTGTGGGCAACGTCACAAAATCCCACGATGTGTGCAACCTCCCCAAATCCCCCACACTCTGTGCAACCTCCCCAACTCCCCGACTCTCTGCAACCTCCCCAAATCCCCCACACTGTGTGCAACCTTCTCAAATCC e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467031 6 - 13651311 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549009 68 - 107702431 T e cerAty1.NW_012000820v1 1475215 130 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488670 1 + 114371477 I e panTro5.chr2A 1515213 49 + 111504155 I a score=529.000000 s hg38.chr2_KI270774v1_alt 213056 8 + 223625 CCCTACTG s panPan2.chr2A 1488671 8 + 114371477 CCCCACCG i panPan2.chr2A I 1 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467031 6 - 13651311 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549009 68 - 107702431 T e cerAty1.NW_012000820v1 1475215 130 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515213 49 + 111504155 I a score=6274.000000 s hg38.chr2_KI270774v1_alt 213064 25 + 223625 TGTGCAACCTCCTCAAATCCCCCCC s panTro5.chr2A 1515262 25 + 111504155 TGTGCAACGTCCCCAAATCCCCCCT i panTro5.chr2A I 49 C 0 s panPan2.chr2A 1488679 25 + 114371477 TGTGCAACGTCCCCAAATCCCCCCT i panPan2.chr2A C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467031 6 - 13651311 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549009 68 - 107702431 T e cerAty1.NW_012000820v1 1475215 130 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M a score=18975.000000 s hg38.chr2_KI270774v1_alt 213089 37 + 223625 ACTGTGTGCAACCTCCTCAAATCCCCCCCACTGTGTG s panTro5.chr2A 1515287 37 + 111504155 ACTCTGTGCAACCTCCTGAAATCCCCCCCACTGTGTG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1488704 37 + 114371477 ACTCTGTGCAACCTCCTGAAATCCCCCCCACTGTGTG i panPan2.chr2A C 0 C 0 s colAng1.NW_012118821v1 1467037 37 - 13651311 ACTGTGTGCAACCTCCTGAAATTCCCCCCACTGTGTA i colAng1.NW_012118821v1 I 6 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549009 68 - 107702431 T e cerAty1.NW_012000820v1 1475215 130 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M a score=1446.000000 s hg38.chr2_KI270774v1_alt 213126 5 + 223625 CAACC s panPan2.chr2A 1488741 5 + 114371477 CAACC i panPan2.chr2A C 0 C 0 s colAng1.NW_012118821v1 1467074 5 - 13651311 CAACC i colAng1.NW_012118821v1 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549009 68 - 107702431 T e cerAty1.NW_012000820v1 1475215 130 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=1315.000000 s hg38.chr2_KI270774v1_alt 213131 15 + 223625 TCCTCAAATCCCCCC s panPan2.chr2A 1488746 15 + 114371477 TTCTCAAATCCCCCC i panPan2.chr2A C 0 T 701 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549009 68 - 107702431 T e cerAty1.NW_012000820v1 1475215 130 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=0.000000 s hg38.chr2_KI270774v1_alt 213146 28 + 223625 ATGGGGGGCAACGTCCTCAAATCCCCCG e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549009 68 - 107702431 T e cerAty1.NW_012000820v1 1475215 130 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488761 701 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=1983.000000 s hg38.chr2_KI270774v1_alt 213174 27 + 223625 ACTGTGTGCAACCTCCTGAAATCCCTT s cerAty1.NW_012000820v1 1475085 27 - 10304083 ACTGTGTGCAACCTCCCCAAATCCCCC i cerAty1.NW_012000820v1 T 130 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549009 68 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488761 701 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=1475.000000 s hg38.chr2_KI270774v1_alt 213201 6 + 223625 CACTGC s cerAty1.NW_012000820v1 1475112 6 - 10304083 CACTGT i cerAty1.NW_012000820v1 C 0 I 28 s chlSab2.chr14 1548941 6 - 107702431 CACTGT i chlSab2.chr14 T 68 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488761 701 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=1457.000000 s hg38.chr2_KI270774v1_alt 213207 6 + 223625 GTGCAA s cerAty1.NW_012000820v1 1475146 6 - 10304083 ATGCAA i cerAty1.NW_012000820v1 I 28 C 0 s chlSab2.chr14 1548947 6 - 107702431 GTGCAA i chlSab2.chr14 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488761 701 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=28061.000000 s hg38.chr2_KI270774v1_alt 213213 58 + 223625 CCTCCCCAAATACCCCCACTGTGTGCAACCTCCGCAAATCCCCCCACTGTGTGCAACC s panPan2.chr2A 1488060 58 + 114371477 CCTCCCCAAATCCCCCCACTGTAAGTAACCTCCTCAAGTCCCCCCGCACTGTGCAACC i panPan2.chr2A T 701 C 0 s cerAty1.NW_012000820v1 1475152 58 - 10304083 CCTCCCCAAATCCCCCCACTGTATGCAACCTCCCCAAATCCCCCCACTGTGTGCAACC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1548953 58 - 107702431 CCTCCCCAAATCCCCCCACTGTGTGCAGCCTCCCCAAATCCCCCCACTGTGTGCAACC i chlSab2.chr14 C 0 T 74 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=1473.000000 s hg38.chr2_KI270774v1_alt 213271 5 + 223625 TCCCC s panPan2.chr2A 1488118 5 + 114371477 TCCCC i panPan2.chr2A C 0 C 0 s cerAty1.NW_012000820v1 1475210 5 - 10304083 TCCCC i cerAty1.NW_012000820v1 C 0 T 102 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549011 74 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=439.000000 s hg38.chr2_KI270774v1_alt 213276 7 + 223625 AAATCCC s panPan2.chr2A 1488123 7 + 114371477 AAATGCC i panPan2.chr2A C 0 I 3 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549011 74 - 107702431 T e cerAty1.NW_012000820v1 1475215 102 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=0.000000 s hg38.chr2_KI270774v1_alt 213283 4 + 223625 CCCC e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549011 74 - 107702431 T e cerAty1.NW_012000820v1 1475215 102 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488130 3 + 114371477 I e panTro5.chr2A 1515324 0 + 111504155 C a score=13259.000000 s hg38.chr2_KI270774v1_alt 213287 73 + 223625 ACTCTGTGCGACCTCCCCAAATCCCCCCACTATGTGCGACCTCCTCAAAT------------CCCCCCAGTATGTGCAACCTCCT s panPan2.chr2A 1488133 84 + 114371477 ACTGTGTGCAACCTCCC-AAATTCTTCCACTCTGTGCAACCTCCCCAAATACCCCACCCAAATCCCCCACTCTGTGCCGCCTCCC i panPan2.chr2A I 3 C 0 s cerAty1.NW_012000820v1 1475113 73 - 10304083 ACTGTGTGCAACCTCCCCAAATCCCCCCACTGTATGCAACCTCCCCAAAT------------CCCCCCACTGTATGCAACCTCCC i cerAty1.NW_012000820v1 T 102 T 77 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549011 74 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=2029.000000 s hg38.chr2_KI270774v1_alt 213360 35 + 223625 CAAATCCCTCCA-CTCTGTGCAACCTCACCCTATCT s panPan2.chr2A 1488217 36 + 114371477 AAAATCCCCCCAACTCTGTGCAACCTCCGCCTATCC i panPan2.chr2A C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549011 74 - 107702431 T e cerAty1.NW_012000820v1 1475186 77 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=38.000000 s hg38.chr2_KI270774v1_alt 213395 1 + 223625 T s panPan2.chr2A 1488253 1 + 114371477 C i panPan2.chr2A C 0 C 0 s cerAty1.NW_012000820v1 1475109 1 - 10304083 C i cerAty1.NW_012000820v1 T 77 T 30 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549011 74 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=1084.000000 s hg38.chr2_KI270774v1_alt 213396 27 + 223625 TCCCACTGTGTGCAACCCCCCCAAATA s panPan2.chr2A 1488254 24 + 114371477 CCCCA--GTGTGCAACCCCCC-AAATC i panPan2.chr2A C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549011 74 - 107702431 T e cerAty1.NW_012000820v1 1475110 30 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=17274.000000 s hg38.chr2_KI270774v1_alt 213423 35 + 223625 CCCCCACTATGTGCAACCTCCTCAAATCCCCCCAC s panPan2.chr2A 1488278 35 + 114371477 CCCCAACTGTGTGCAGCCTCCCCAAATACCCCCAA i panPan2.chr2A C 0 I 330 s cerAty1.NW_012000820v1 1475080 35 - 10304083 CCCCCACTGTGTGCAACCTCCCCAAATCCCCCCAC i cerAty1.NW_012000820v1 T 30 C 0 s chlSab2.chr14 1548937 35 - 107702431 CCCCCACTGTGTGCAACCTCCCCAAATCCCCCCAC i chlSab2.chr14 T 74 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=10762.000000 s hg38.chr2_KI270774v1_alt 213458 39 + 223625 TGTGTGCAACCTCCCCAAATCCCCCCACTGTGTGCAACC s cerAty1.NW_012000820v1 1475115 39 - 10304083 TGTGTGCAACCTCCCCAAATCCCCCCACTGTATGCAACC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1548972 39 - 107702431 TGTGTGCAGCCTCCCCAAATCCCCCCACTGTGTGCAACC i chlSab2.chr14 C 0 T 28 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488313 330 + 114371477 I e panTro5.chr2A 1515324 0 + 111504155 C a score=7413.000000 s hg38.chr2_KI270774v1_alt 213497 28 + 223625 TCCCCAAAACCCCCCACTGTGTGCAACC s cerAty1.NW_012000820v1 1475154 28 - 10304083 TCCCCAAATCCCCCCACTGTATGCAACC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1548983 28 - 107702431 TCCCCAAATCCCCCCACTGTGTGCAACC i chlSab2.chr14 T 28 T 125 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488313 330 + 114371477 I e panTro5.chr2A 1515324 0 + 111504155 C a score=2548.000000 s hg38.chr2_KI270774v1_alt 213525 34 + 223625 TCCCCAAATCCCCCCCACTGTGAGCAACCTCCCC s cerAty1.NW_012000820v1 1475182 33 - 10304083 TCCCCAAAT-CCCCCCACTGTGTGCAACCTCCCC i cerAty1.NW_012000820v1 C 0 T 134 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549011 125 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488313 330 + 114371477 I e panTro5.chr2A 1515324 0 + 111504155 C a score=0.000000 s hg38.chr2_KI270774v1_alt 213559 238 + 223625 AAATCCCCACACTGTCTGCAACCACCCCAAATCGCCCCCACTGTGTGCAACCGCCTCATATTCCCCCCACTGTGTGGACCCTTCTCAAATCCCCCCTAATGTCAGCAACTTCCCTAAATCCCCCAACTGTGTTCAACCTCCCCAAATCCCTCCCACTGTGTGCAGCCTCCCCAAATCCTCCCGACTCTGTGCAACCTCCCAAAATTGCCCCCACTGTGTTCAACCTCCCCAAATCCCT e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549011 125 - 107702431 T e cerAty1.NW_012000820v1 1475215 134 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488313 330 + 114371477 I e panTro5.chr2A 1515324 0 + 111504155 C a score=8523.000000 s hg38.chr2_KI270774v1_alt 213797 115 + 223625 CCCACTGTGAGCAACCTCCCCAAATCCCTCCCACTGTGTGCAGCCTCCCCAAATCCTCCCGACTCTGTGCAACCTCCCAAAATTGCCCCCACTGTGTGCAACCTCCTCAAATCCC s panPan2.chr2A 1488643 115 + 114371477 CCCACTCTGTGCAACCTCCCGAAATCCACCCCACCGTGTGCAACGTCCCCAAATCCCCCCTACTCTGTGCAACCTCCTGAAATCCCCCCCACTGTGTGCAACCTTCTCAAATCCC i panPan2.chr2A I 330 T 196 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549011 125 - 107702431 T e cerAty1.NW_012000820v1 1475215 134 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=0.000000 s hg38.chr2_KI270774v1_alt 213912 321 + 223625 TCCCACTCTGTGCAAACTCCCCAAACCCCCACACTCTGTGCAACCGCCCCATATCCCCCCCACTCTGTGCAACCTCCCCAAAACACCCCTCAATGTGTGCAACCTCGCCCAATCACGACACTGTGTGCAATCTCCCCAAATCCCGCCCACTCTTTGCAACCTCGCCAAATCCCCCCCACTCTCTGCAACCTCCCCAAATCACCCCCACTCTCTGTAACCTCCCCAAATCACCCCCACTCTCTGCAACCTCCCCAAATCACCCCCACTCTCTGCAACCTCCCCAAATCACCCCCACTCTCTGCAACCTCCCCAAATCCCTCA e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549011 125 - 107702431 T e cerAty1.NW_012000820v1 1475215 134 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488758 196 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=2134.000000 s hg38.chr2_KI270774v1_alt 214233 27 + 223625 CACTGTGTGCAACCTCCTCAAATCACC s chlSab2.chr14 1548886 27 - 107702431 CACTGTGTGCAGCCTCCCCAAATCCCC i chlSab2.chr14 T 125 T 4 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e cerAty1.NW_012000820v1 1475215 134 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488758 196 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=0.000000 s hg38.chr2_KI270774v1_alt 214260 27 + 223625 CTACTGTGTGCAACCTCCTCAAATCAC e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1548913 4 - 107702431 T e cerAty1.NW_012000820v1 1475215 134 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488758 196 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=6929.000000 s hg38.chr2_KI270774v1_alt 214287 83 + 223625 CCCCACTGTGTGCAACCTCCTCAAATCCCCCCACTGCGAGCAACCTCCTCAAATCTCCCCACTGTGTGCAACCTCCCAAAATC s cerAty1.NW_012000820v1 1475081 83 - 10304083 CCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTATGCAACCTCCCCAAATC i cerAty1.NW_012000820v1 T 134 T 112 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1548913 4 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488758 196 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=0.000000 s hg38.chr2_KI270774v1_alt 214370 57 + 223625 TCCCCTATTGTGTGCAACGTCCTCAAATCCCCTCACTGTGTGCAACCTCCCCAAATA e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1548913 4 - 107702431 T e cerAty1.NW_012000820v1 1475164 112 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488758 196 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=25718.000000 s hg38.chr2_KI270774v1_alt 214427 103 + 223625 CCCCCCACTGTGTGCACCTTCCTCAAGTCCCCCACTGTGTGCAACCCCCACAAATCCCCCCACTGTGCGCAACCTCCTCTAATCCCCTCACTGTGTGCAACCT s cerAty1.NW_012000820v1 1475052 103 - 10304083 CCCCCCACTGTGTGCAACACCCTCAAATCCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTATGCAACCT i cerAty1.NW_012000820v1 T 112 C 0 s chlSab2.chr14 1548909 103 - 107702431 CCCCCCACTGTGTGCAACGCCCTCAAATCCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTGTGCAGCCTCCCCAAATCCCCCCACTGTGTGCAACCC i chlSab2.chr14 T 4 T 99 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488758 196 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=336.000000 s hg38.chr2_KI270774v1_alt 214530 8 + 223625 ACACAAAT s cerAty1.NW_012000820v1 1475155 8 - 10304083 CCCCAAAT i cerAty1.NW_012000820v1 C 0 T 50 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549012 99 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488758 196 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=0.000000 s hg38.chr2_KI270774v1_alt 214538 544 + 223625 GCCCCCCACAGTGCGCAACCTCCTCAAATCCCCCACCACTGTGAGCAACCTCCTCAAATCCCCCCACTGCCTGCAACCTCCTCAAATCCCCCCACTGTGTGCAACCTCCTCAAGTCCCCCACTGTGTGCAACCCCCACAAAACTCCCACTGTGCGCAACCTCCTCTAATCCCCTGTGTGCAACCTCCACAAATACCCCCCACAGTGCGCAACCTCCTCAAATCCCCCACCACTGTGAGCAACCTCCCCAAATCCCCCCACTGTGAGTAACCTCCTGCAATTGCCCCGCACTGTGCAACCTCCTCAAATCCCCCCCACAGTGCAAAACCTCCTCAAAACCCCCGCCACTCTGAGCAACCTCCTCAAATACCCCACTGTCAGCAACCTCCTCAAATCCCCCCAACTGTGTGCGACCTCCCCAAATCCCCCCCACAGTGTGCAATCTCCACAAATCCCCCCCCACTCTGTACAACCTCCCCAAACCCCCCCAACTGTGTACAACTTCCTCACAACCACCCACTCTGTGCAACCTCCCCAAATCCCCC e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549012 99 - 107702431 T e cerAty1.NW_012000820v1 1475163 50 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488758 196 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=7913.000000 s hg38.chr2_KI270774v1_alt 215082 101 + 223625 ACTGTGAGCAACCTTCCCAAATCCCCCCACTGTGTGCAATCTCCCCATATCCCCCCACTGTGAGCAACCTCCCCAAATCCCCCACACTATGTGCAACCTCC s cerAty1.NW_012000820v1 1475113 100 - 10304083 ACTGTGTGCAACCTCCCCAAATCCCCCCACTGTATGCAACCTCCCCAAATCCCCCCACTGTATGCAACCTCCCCAAATCCCCC-CACTGTGTGCAACCTCC i cerAty1.NW_012000820v1 T 50 T 100 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549012 99 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488758 196 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=0.000000 s hg38.chr2_KI270774v1_alt 215183 205 + 223625 TCAAATCCCCCCACTCTGCACAATCTCCCCAAATCCCCCCCACTCTGCGCAACCTCCTCAAATACCCCCAGTTTGCAACCTCCCAAAATCTCCCTATGTGCAACCTCGCAAAATCTCCCCCACTATGTGCAACCTCCTCAAATCCCCCCACTGTGTCCAGCCTCCCCAAATCCCTCCCACTGTGTGCAACCTCCTCTAGTCCCCC e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549012 99 - 107702431 T e cerAty1.NW_012000820v1 1475213 100 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488758 196 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=4254.000000 s hg38.chr2_KI270774v1_alt 215388 56 + 223625 ACTGTGTGCACCCCCCAAAAATCCCCCCACTGTGTGCAACCTCCTCAAATCCCCCT s cerAty1.NW_012000820v1 1475113 56 - 10304083 ACTGTGTGCAACCTCCCCAAATCCCCCCACTGTATGCAACCTCCCCAAATCCCCCC i cerAty1.NW_012000820v1 T 100 T 139 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549012 99 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488758 196 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=1650.000000 s hg38.chr2_KI270774v1_alt 215444 26 + 223625 ACTGCGAGCAACCTCCTCAAATCTCT s cerAty1.NW_012000820v1 1475030 26 - 10304083 ACTGTGTGCAACCTCCCCAGATCCCC i cerAty1.NW_012000820v1 T 139 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549012 99 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488758 196 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=3806.000000 s hg38.chr2_KI270774v1_alt 215470 16 + 223625 CCACTGTGTGCAACCT s cerAty1.NW_012000820v1 1475056 16 - 10304083 CCACTGTGTGCAACAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1548913 16 - 107702431 CCACTGTGTGCAACGC i chlSab2.chr14 T 99 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467079 0 - 13651311 C e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488758 196 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=13561.000000 s hg38.chr2_KI270774v1_alt 215486 25 + 223625 CCCCAAATCCCCCACTGTGTGCAAC s cerAty1.NW_012000820v1 1475072 25 - 10304083 CCTCAAATCCCCCACTGTGTGCAAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1548929 25 - 107702431 CCTCAAATCCCCCACTGTGTGCAAC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1467079 25 - 13651311 CCCCAAACCCCCCACTGTGTGCAAC i colAng1.NW_012118821v1 C 0 M 919 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488758 196 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=13114.000000 s hg38.chr2_KI270774v1_alt 215511 51 + 223625 GTCCCCAAATCCCCCCACTGTGAGCAACCTTCCCAAATCCCCCCACTGTGT s cerAty1.NW_012000820v1 1475097 51 - 10304083 CTCCCCAAATCCCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTAT i cerAty1.NW_012000820v1 C 0 T 7 s chlSab2.chr14 1548954 51 - 107702431 CTCCCCAAATCCCCCCACTGTGTGCAGCCTCCCCAAATCCCCCCACTGTGT i chlSab2.chr14 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488758 196 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=382.000000 s hg38.chr2_KI270774v1_alt 215562 4 + 223625 GCAA s chlSab2.chr14 1549005 4 - 107702431 GCAA i chlSab2.chr14 C 0 I 67 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e cerAty1.NW_012000820v1 1475148 7 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488758 196 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=0.000000 s hg38.chr2_KI270774v1_alt 215566 113 + 223625 TCTccccatatccccccatatccccccaCTGTGAGCAACCTCCCCAAATCCCCCACACTATGTGCAACCTCCTCAAATCCCCCCACTCTGCACAATCTCCCCAAATCCCCCCC e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549009 67 - 107702431 I e cerAty1.NW_012000820v1 1475148 7 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488758 196 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=15620.000000 s hg38.chr2_KI270774v1_alt 215679 72 + 223625 ACTCTGCGCAACCTCCTCAAATCCCCCCACTGTGTGCAACCTTCCCAAATCCCCCCACTGTGTGCAACCTCC s panPan2.chr2A 1488562 72 + 114371477 ACTGTGAGCAACTTCCCAAAATCCCCCCAGTGTGAGCAATGTCCCCAAATCCCCCCACTGTGAGCAACCTGC i panPan2.chr2A T 196 C 0 s cerAty1.NW_012000820v1 1475141 72 - 10304083 ACTGTATGCAACCTCCCCAAATCCCCCCACTGTATGCAACCTCCCCAAATCCCCCCACTGTGTGCAACCTCC i cerAty1.NW_012000820v1 T 7 T 56 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549009 67 - 107702431 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=8057.000000 s hg38.chr2_KI270774v1_alt 215751 40 + 223625 TCAAATCCCCACACTGTTTGCAACCTCCTCAAATCCCCCC s panPan2.chr2A 1488634 40 + 114371477 CCAATTTCCCCCACTCTGTGCAACCTCCCGAAATCCACCC i panPan2.chr2A C 0 C 0 s cerAty1.NW_012000820v1 1475157 40 - 10304083 CCAAATCCCCCCACTGTATGCAACCTCCCCAAATCCCCCC i cerAty1.NW_012000820v1 T 56 M 932 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549009 67 - 107702431 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=1176.000000 s hg38.chr2_KI270774v1_alt 215791 25 + 223625 AAATGTGTGCAACCTCCCGAAATCG s panPan2.chr2A 1488674 25 + 114371477 CACCGTGTGCAACGTCCCCAAATCC i panPan2.chr2A C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549009 67 - 107702431 I e cerAty1.NW_012000820v1 1475197 932 - 10304083 M e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=6126.000000 s hg38.chr2_KI270774v1_alt 215816 27 + 223625 CCCCCACTGTGTGCAACCTCCCCAAAT s panPan2.chr2A 1488699 27 + 114371477 CCCCTACTCTGTGCAACCTCCTGAAAT i panPan2.chr2A C 0 C 0 s chlSab2.chr14 1549076 27 - 107702431 CCCCCACTGTGTGCAACCCCCTCAAAT i chlSab2.chr14 I 67 T 161 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e cerAty1.NW_012000820v1 1475197 932 - 10304083 M e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=2608.000000 s hg38.chr2_KI270774v1_alt 215843 35 + 223625 CCCCCCAACTGTTTGGAACCTCCTCAAATCCCCCC s panPan2.chr2A 1488726 35 + 114371477 CCCCCCCACTGTGTGCAACCTTCTCAAATCCCCCC i panPan2.chr2A C 0 T 181 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549103 161 - 107702431 T e cerAty1.NW_012000820v1 1475197 932 - 10304083 M e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=0.000000 s hg38.chr2_KI270774v1_alt 215878 1245 + 223625 ACTGTGTGCAACCTCCCGAAATCCCCCCAACTTTGTGCAACCTCCCCAAATGCCCACTGTGTGCAACGTCCCGAAATCCCCCCCACTCTGTGCAACCTCCCCAAATCCCCGCCACTCTGTGAAACCTCCCCCATCCCTTCCAGTTTGTGCACCCCCCCAAATCCCCCCACTATGTGACACCTCCTCAAATCCCCCCACTGTGAGCAACCTCCTGAAATCCCTCTCACTGCGTGCAACTTCCTCAAATTCCTCCCCCACTCTGAGTAGCCTCCTCAAATCCCCCCCAGTGTGTGCAACGTCCCCAAATCGCCCCACTGTGTGCATTCTCCTCAAATGCCCCTAGCTTTGTGAAACCTCCCCAAATCCCCCCCACTCTGTGTGCAACCTCCCCAGATCTCCTTTCTGTGCAACCTCCATAAATCCAACCAAATGTATGCAACCTCCTCAAATCCCCACCACTCTGTGCAACCTCCCCAAATCCCCATCACTCTGTGTAATCTCCCCAAATCCCCCCCAATCTGTGCAACCTCCCCAAATCCCACCACTGTGTTCAACCTCCCCGAATACCCACCACTCTGTGCAACCTCCCCAAAACGCCCCCACTCTGTGCAACCTCCCCAAATCCCCCCAACTGTTTGCAACCTCCCAAATCCCCCCCAATGCGAGCAACCTCCCAAATCCCCCGTGTGCAACCCCCCAATCTCCCCCACTGTGTGCAACCTCCTCAAATCCCCCATCACTCAGAGCAACCTTCTCAAATCCCCCCAATATGAGCAACCTCCTCACATCCCCCTCGCTGTGCGCAACCTCATCAAATTTTCCCACTGTGTGCAACTTCCCTAAGTCGTCCAACTGTGTTCAACCTCCCCAAATCCCTCCAACTGTGTGCAACCTCCCCAAATCCGCCCCCACCCTGTGCAGCCTCACAAAATTACCCCCAGTGCAATCTCAAATCCCTCCCACTCTGTGCAAACTCCCCAAACCCCCCACGCAGTGTGCAACTTCCCCAAATCCCTCCCACTCTGTGCAACCTCCCCAAATCCCTACCACTCTGTGCAACTTCCCCAAATCCGCCCACACTGTGCAACCGCACCAAATCGCGCCACTGTGTGCAACCTCCACAAATCCCGCCCACTCTGTGCAATGTCCCCAAATACCCCCCCCACTCTGTGCAACTTCCAAAAATCCCCCACACAGTGTGCAACCTCCTCAATTCCCTCTAGTGTGTGCAACCTCCTCAAATCT e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549103 161 - 107702431 T e cerAty1.NW_012000820v1 1475197 932 - 10304083 M e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488761 181 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=1264.000000 s hg38.chr2_KI270774v1_alt 217123 13 + 223625 CCCCCACTGTGTG s cerAty1.NW_012000820v1 1476152 13 - 10304083 CCCCCACTGTGTG i cerAty1.NW_012000820v1 M 932 T 1037 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549103 161 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488761 181 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=0.000000 s hg38.chr2_KI270774v1_alt 217136 582 + 223625 CAACCTCCTCAAATATCCCCACTGTGGGTAACCTCCCCAAATCCCCCCCACTGTGTGCAACCTCAAGTCCCCCACTGTGTGTAACCCCCCCAAATCCCACCACTGTGCACAACCTCCTCTAATCTGTTCACTGTGTGCAACCTCCCCAAATCCCTCCCCAATGTGTGCAGTCTCCTCAAATCCTCCGCCACTGTGAGCAACCTCCTCAAATCCCCCCAGTGTGTGCAATTTCCCTAAATCGCCGCAAGTGTGTACAACCTCCCCAAATCCCCCCCACTGTGTGCAACCTCCCCAAATCTCCCCCACTCTGTGCACCTTCCCCAAATCTACCTAACTCTGTGTAACCTCCTCACATCCCCCCACTCTGTGCAACCTCCCCAAATCCCCCCCCCCCCCATTGTGGGCAACCACACCAAATCCCGCCACTTGTGCAACCTCATCAATTTCCCCCCATTCTGTGCAACCTCCCCAAATCCACCCCACTCTGTGCAACCTCCCAAAATCCCCCATACTGTATGCAACCTCCTCAAATCCCTGTACTGTGTGCAACCTCCTCAAATCCCCCCCACTGTATGCAACCTA e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549103 161 - 107702431 T e cerAty1.NW_012000820v1 1476165 1037 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488761 181 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=169.000000 s hg38.chr2_KI270774v1_alt 217718 3 + 223625 CTC s cerAty1.NW_012000820v1 1475128 3 - 10304083 CCC i cerAty1.NW_012000820v1 T 1037 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549103 161 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488761 181 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=9921.000000 s hg38.chr2_KI270774v1_alt 217721 45 + 223625 AAATCCCCCCACTGTGTGCAACCTCCTCAAATCTCCCCACTGTGA s panPan2.chr2A 1488580 45 + 114371477 AAATCCCCCCAGTGTGAGCAATGTCCCCAAATCCCCCCACTGTGA i panPan2.chr2A T 181 C 0 s cerAty1.NW_012000820v1 1475131 45 - 10304083 AAATCCCCCCACTGTATGCAACCTCCCCAAATCCCCCCACTGTAT i cerAty1.NW_012000820v1 C 0 T 91 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549103 161 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=8856.000000 s hg38.chr2_KI270774v1_alt 217766 134 + 223625 GCAACCTCCCCAAATCCCCCTACTGTGTGCAACCTCCCCAAATCCCCCCCACTCTGTGCAACCTCCCCAAATCAGCCCCACTCCGTGCAACCTCCGCCTATCCCTCCCACTGGGTGCAACCTCCCCAAATCCCC s panPan2.chr2A 1488625 134 + 114371477 GCAACCTGCCCAATTTCCCCCACTCTGTGCAACCTCCCGAAATCCACCCCACCGTGTGCAACGTCCCCAAATCCCCCCTACTCTGTGCAACCTCCTGAAATCCCCCCCACTGTGTGCAACCTTCTCAAATCCCC i panPan2.chr2A C 0 T 246 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549103 161 - 107702431 T e cerAty1.NW_012000820v1 1475176 91 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=0.000000 s hg38.chr2_KI270774v1_alt 217900 110 + 223625 GTGTGCCACTTCCCCAAATCACCACATTGTGAGCAACCTCCCCAAATCCCCCCACTGCGAAGACCTCCTCAAATTGCCCCGCAGTGTACAACCTCCTCAAATCCTCCCTC e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549103 161 - 107702431 T e cerAty1.NW_012000820v1 1475176 91 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488759 246 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=10157.000000 s hg38.chr2_KI270774v1_alt 218010 129 + 223625 GCTGTGTGCAACCTCCTCAAATCCCCCCACTCTGTGCAACCTCCCCACATGCCCCCAGTGTGTGCAACCTCCCGAAATCCACCCAGTGTGTGCAACCTCCCCAAATCCCCCCACTCTGTGCAACCTCCC s cerAty1.NW_012000820v1 1475085 129 - 10304083 ACTGTGTGCAACCTCCCCAAATCCCCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTATGCAACCTCCCCAAATCCCCCCACTGTATGCAACCTCCCCAAATCCCCCCACTGTGTGCAACCTCCC i cerAty1.NW_012000820v1 T 91 T 129 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549103 161 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488759 246 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=0.000000 s hg38.chr2_KI270774v1_alt 218139 208 + 223625 GAAATCCCCCCAACTCTGTGCAACCTCCGCCATCCCTCCCACTGTGTGCAACCTGCTCAAATCCCCAAACTGTGTGCAACCTCCCCGAATCCCCCCAACTTTGTGCAACCTCAAGTCCCCGAATGTGTGCAACCCCCCCAAATCCCGTGTGCAACCTCCCCAAATCCCCCACACTATGTGCAACCTCCTCAAATCCCCCCACTCTGCA e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549103 161 - 107702431 T e cerAty1.NW_012000820v1 1475214 129 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488759 246 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=1570.000000 s hg38.chr2_KI270774v1_alt 218347 21 + 223625 CAATCTCCCCAAATCCCCCCC s panPan2.chr2A 1488513 21 + 114371477 CAACCTCCCCACATCTCCCCC i panPan2.chr2A T 246 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549103 161 - 107702431 T e cerAty1.NW_012000820v1 1475214 129 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=6195.000000 s hg38.chr2_KI270774v1_alt 218368 28 + 223625 ACTCTGCGCAACCTCCTCAAATCCCCCC s panPan2.chr2A 1488534 28 + 114371477 ACTGAGTACAACCTCCCCAAATTCCCCC i panPan2.chr2A C 0 C 0 s cerAty1.NW_012000820v1 1475085 28 - 10304083 ACTGTGTGCAACCTCCCCAAATCCCCCC i cerAty1.NW_012000820v1 T 129 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549103 161 - 107702431 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=33246.000000 s hg38.chr2_KI270774v1_alt 218396 69 + 223625 ACTGTGTGCAACCTCCTCAAATCCCCCCACTGTGTGCAACCTTCCCAAATCCCCCCACTGTGTGCAACC s panPan2.chr2A 1488562 69 + 114371477 ACTGTGAGCAACTTCCCAAAATCCCCCCAGTGTGAGCAATGTCCCCAAATCCCCCCACTGTGAGCAACC i panPan2.chr2A C 0 C 0 s cerAty1.NW_012000820v1 1475113 69 - 10304083 ACTGTGTGCAACCTCCCCAAATCCCCCCACTGTATGCAACCTCCCCAAATCCCCCCACTGTATGCAACC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1548942 69 - 107702431 ACTGTGTGCAACCTCCCCAAATCCCCCCACTGTGTGCAGCCTCCCCAAATCCCCCCACTGTGTGCAACC i chlSab2.chr14 T 161 I 92 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=7034.000000 s hg38.chr2_KI270774v1_alt 218465 33 + 223625 TTCCCAAATCCCCCCATTATGTGCAACCTCCCC s panPan2.chr2A 1488631 33 + 114371477 TGCCCAATTTCCCCCACTCTGTGCAACCTCCCG i panPan2.chr2A C 0 C 0 s cerAty1.NW_012000820v1 1475182 33 - 10304083 TCCCCAAATCCCCCCACTGTGTGCAACCTCCCC i cerAty1.NW_012000820v1 C 0 T 103 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549011 92 - 107702431 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=564.000000 s hg38.chr2_KI270774v1_alt 218498 6 + 223625 AAATCC s panPan2.chr2A 1488664 6 + 114371477 AAATCC i panPan2.chr2A C 0 T 540 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549011 92 - 107702431 I e cerAty1.NW_012000820v1 1475215 103 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=0.000000 s hg38.chr2_KI270774v1_alt 218504 54 + 223625 CCCAATCTATGCAACCTCCCCGTTCCCCCCAATGTGTTCAAGCCCCCCAAATCC e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549011 92 - 107702431 I e cerAty1.NW_012000820v1 1475215 103 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488670 540 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=4184.000000 s hg38.chr2_KI270774v1_alt 218558 59 + 223625 CCCCACTGTGTGCAACCTCCCGAAATCGCCCCCACTGTGTGCAACCTCCCCAAATCCCC s chlSab2.chr14 1549103 57 - 107702431 CCCCACCGTGTGCAACC-CCCTAAATC-CCCCCACTGTGTGCAACCTCCTCAAATCCCC i chlSab2.chr14 I 92 T 222 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e cerAty1.NW_012000820v1 1475215 103 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488670 540 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=0.000000 s hg38.chr2_KI270774v1_alt 218617 1120 + 223625 CCAACTGTTTGGAACCTCCTCAAATCCCCCCACTGTGTGCAACCTCCCGAAATCCCCCCAACTTTGTGCAACCTCCCCAAATGCCCACTGTGTGCAACGTCCCGAAATCCCCCCCACTCTGTGCAACCTCCCCAAATCCCCGCCACTCTGTGAAACCTCCCCCATCCCTTCCAGTTTGTGCACCCCCCCAAATCCCCCCACTATGTGACACCTCCTCAAATCCCCCCACTGTGAGCAACCTCCTGAAATCCCTCTCACTGCGTGCAACTTCCTCAAATTCCTCCCCCACTCTGAGTAGCCTCCTCAAATCCCCCCCAGTGTGTGCAACGTCCCCAAATCGCCCCACTGTGTGCATTCTCCTCAAATGCCCCTAGCTTTGTGAAACCTCCCCAAATCCCCCCCCCCACTGTGTGCAACCTCCCCAGATCTCCTTTCTGTGCAACCTCCATAAATCCAACCAAATGTATGCAACCTCCTCAAATCCCCACCACTCTGTGCAACCTCCCCAAATCCCCATCACTCTGTGTAATCTCCCCAAATCCCCCGCAATCTGTGCAACCTCCCCAAATCCCCCCCACTGTGTGCAACCTCCCCAAATCCCGCCACTGTGTTCAACCTCCCCGAATACCCACCACTCTGTGCAACCTCCCCAAATCCCAACTGTTTGCAACCTCCCAAATCCCCCCCAATGTGAGCAACCTCTCAAATCCCCCTGTGTGCAACCCCCCAATCTCCCCCACTGTGTGCAACCTCAAATCCCCCCACTGTGTGCAACGTCCTCAAATACCCCCACTGTGTGCAACCTCCCCAAATCCCTGCCACTGTGTGCAACCTCACCAAATCCGTCCACTGTGTGCAACCTCCCTAGATCCCCCCTATGTGCAACCTCCGCAAATACCCCCACTCTGTGCAAGTGCCCCCTATTTCCCCAACTGTGTAGCAACCTCCCCAAATCCCCCCACTGTGTGCCACCTCCCCAAATCCCCCAACTGTTTCGAACCACCTCAAATCCCCCCACTGTGTGCAACCTCCCCAAATCCCCCCCACCCTCTGCAACGTCCCCAAACCTACTCTGTCCAACCTCCCCAAATCCTCCACTCTGTTCGACCTCCGCCTATCG e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549160 222 - 107702431 T e cerAty1.NW_012000820v1 1475215 103 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488670 540 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=4398.000000 s hg38.chr2_KI270774v1_alt 219737 57 + 223625 CCCTACTGTGTGCAACTCCCTCAAATCCCCCCACTGTGAGCAACCTCCCCAAACCCT s chlSab2.chr14 1548938 57 - 107702431 CCCCACTGTGTGCAACCTCCCCAAATCCCCCCACTGTGTGCAGCCTCCCCAAATCCC i chlSab2.chr14 T 222 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e cerAty1.NW_012000820v1 1475215 103 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488670 540 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=16596.000000 s hg38.chr2_KI270774v1_alt 219794 86 + 223625 CCCATTGTGTGCAAACTCCCAAATCTCCCCACTGTGTGCAACCTCCTCAAAT------------TCTTCCACTCTGTGCAGCCTCCCCAAATCCCCCC s panPan2.chr2A 1488130 98 + 114371477 CCCACTGTGTGCAACCTCCCAAATTCTTCCACTCTGTGCAACCTCCCCAAATACCCCACCCAAATCCCCCACTCTGTGCCGCCTCCCAAAATCCCCCC i panPan2.chr2A T 540 C 0 s chlSab2.chr14 1548995 86 - 107702431 CCCACTGTGTGCAACCCCCCAAATCTCCCCACTGTTTGCAACCCCCCCAAAT------------CCCCCCACTGTGTGCAACACACCCAAATCCCCCC i chlSab2.chr14 C 0 I 82 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e cerAty1.NW_012000820v1 1475215 103 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=15869.000000 s hg38.chr2_KI270774v1_alt 219880 251 + 223625 AACTCTGTGCAACCTCCGCCTATCCCCCCCAGTG---------------------------------------------------------------------------------TGCAACCTCCTGAAATCCCCCAACTGTGTTCAACACCCCCAAATCCCCCCATTGTGTGCAAACTCCTCAAATCACCCCGCTGTGTGCAACATCCCCAGAT-CCCCCCCAATGTGTGCAACCTCCGCAAATCCCCCTACTCTGTGGAACCTCCTCAAATCCCAACTGTGAGCGACCTCCCCAAATCCCCCAACTGTCTGCAAACTCCCCACATCTCCCT s panPan2.chr2A 1488228 305 + 114371477 AACTCTGTGCAACCTCCGCCTATCCCCCCCAGTGTGCAACCCCCCAAATCCCCCAACTGTGTGCAGCCTCCCCAAATACCCCCAAGTGCTACCTCCTCAAATCCCCCGTACTGTTTGCAACCTCCTGAAATCCCCCAACTGTGTTCAACACCTCCAAATCCCCCCATTGTGTGCAAACTCCTCAAATCACCCCGCTGTGTGCAACATCCCCAGATCCCCCCCCACTGTGTGCAACCTCCGCAAATCCCCGTACTCTGTGGAACCTCCCCAGATCCCAACTGTGAGCAAC----------------------------CTCCCCACATCTCCCC i panPan2.chr2A C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549081 82 - 107702431 I e cerAty1.NW_012000820v1 1475215 103 - 10304083 T e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=20468.000000 s hg38.chr2_KI270774v1_alt 220131 89 + 223625 CACTGAGTACAACCTCCCCAAATCCCCCCATTGTGAGCAATGTCCCCAAATCCCCCCACTGTGAGCAACCTCCTCAAATCCCCCCACTG s panPan2.chr2A 1488533 89 + 114371477 CACTGAGTACAACCTCCCCAAATTCCCCCACTGTGAGCAACTTCCCAAAATCCCCCCAGTGTGAGCAATGTCCCCAAATCCCCCCACTG i panPan2.chr2A C 0 I 28 s cerAty1.NW_012000820v1 1475112 89 - 10304083 CACTGTGTGCAACCTCCCCAAATCCCCCCACTGTATGCAACCTCCCCAAATCCCCCCACTGTATGCAACCTCCCCAAATCCCCCCACTG i cerAty1.NW_012000820v1 T 103 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549081 82 - 107702431 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=2903.000000 s hg38.chr2_KI270774v1_alt 220220 11 + 223625 TGTGCAATCTC s panPan2.chr2A 1488650 11 + 114371477 TGTGCAACCTC i panPan2.chr2A I 28 C 0 s cerAty1.NW_012000820v1 1475201 11 - 10304083 TGTGCAACCTC i cerAty1.NW_012000820v1 C 0 M 932 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549081 82 - 107702431 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=3120.000000 s hg38.chr2_KI270774v1_alt 220231 44 + 223625 ---AAATCCCCCCCACTGTGTGCAACCTCCTCAAATCCCCACCACTC s panPan2.chr2A 1488661 47 + 114371477 CCGAAATCCACCCCACCGTGTGCAACGTCCCCAAATCCCCCCTACTC i panPan2.chr2A C 0 T 86 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549081 82 - 107702431 I e cerAty1.NW_012000820v1 1475212 932 - 10304083 M e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=2478.000000 s hg38.chr2_KI270774v1_alt 220275 28 + 223625 TGTGCAACCTGCCCAATTTCCCCCACTC s panPan2.chr2A 1488622 28 + 114371477 TGAGCAACCTGCCCAATTTCCCCCACTC i panPan2.chr2A T 86 I 60 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549081 82 - 107702431 I e cerAty1.NW_012000820v1 1475212 932 - 10304083 M e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=4199.000000 s hg38.chr2_KI270774v1_alt 220303 51 + 223625 TGCAACCTCCCGAAATCCCCCGTAGTGTGTGCAACCTTCTCAAATCCCCCC s panPan2.chr2A 1488710 51 + 114371477 TGCAACCTCCTGAAATCCCCCCCACTGTGTGCAACCTTCTCAAATCCCCCC i panPan2.chr2A I 60 T 111 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549081 82 - 107702431 I e cerAty1.NW_012000820v1 1475212 932 - 10304083 M e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=0.000000 s hg38.chr2_KI270774v1_alt 220354 86 + 223625 ACTCTGTGCAACCCCCCCAAATCCCTCTACTGTGTGCCACCTCAAGTCCCCCCACTGTGTGCAACCTCCTCAAATCCCCCACACTG e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549081 82 - 107702431 I e cerAty1.NW_012000820v1 1475212 932 - 10304083 M e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panPan2.chr2A 1488761 111 + 114371477 T e panTro5.chr2A 1515324 0 + 111504155 C a score=4153.000000 s hg38.chr2_KI270774v1_alt 220440 68 + 223625 TGTGCAGCCTCCTCAAATCCTCCCCACTGTGTGCAACCTCCTCAAATCCCCGC-ACTGTGTTCAACCTT s panPan2.chr2A 1488650 69 + 114371477 TGTGCAACCTCCCGAAATCCACCCCACCGTGTGCAACGTCCCCAAATCCCCCCTACTCTGTGCAACCTC i panPan2.chr2A T 111 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e calJac3.chr14 1454219 104 - 108792865 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549081 82 - 107702431 I e cerAty1.NW_012000820v1 1475212 932 - 10304083 M e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=1473.000000 s hg38.chr2_KI270774v1_alt 220508 11 + 223625 CTCAAATACCC s panPan2.chr2A 1488719 11 + 114371477 CTGAAATCCCC i panPan2.chr2A C 0 C 0 s calJac3.chr14 1454323 11 - 108792865 cccaaatgcca i calJac3.chr14 I 104 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e saiBol1.JH378218 1283288 0 - 7082604 C e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549081 82 - 107702431 I e cerAty1.NW_012000820v1 1475212 932 - 10304083 M e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=4083.000000 s hg38.chr2_KI270774v1_alt 220519 11 + 223625 CATACTGTGTA s panPan2.chr2A 1488730 11 + 114371477 CCCACTGTGTG i panPan2.chr2A C 0 C 0 s calJac3.chr14 1454334 11 - 108792865 cctgctgtgtg i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1283288 11 - 7082604 CGCACTGTGTG i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549081 82 - 107702431 I e cerAty1.NW_012000820v1 1475212 932 - 10304083 M e macNem1.NW_012011978v1 1513678 2828 + 3644372 M e panTro5.chr2A 1515324 0 + 111504155 C a score=15995.000000 s hg38.chr2_KI270774v1_alt 220530 17 + 223625 CAACCT-CCTCAAATCCC s panTro5.chr2A 1515324 17 + 111504155 CAACCT-TCTCAAATCCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1488741 17 + 114371477 CAACCT-TCTCAAATCCC i panPan2.chr2A C 0 C 0 s cerAty1.NW_012000820v1 1476165 17 - 10304083 CAACCT-CCTCAAGTCCC i cerAty1.NW_012000820v1 M 932 C 0 s calJac3.chr14 1454345 18 - 108792865 cagcctcccccagctcct i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1283299 17 - 7082604 CAGCCT-CCCCAACTCCC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 197225 141 + 287728 I e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549081 82 - 107702431 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M a score=2976.000000 s hg38.chr2_KI270774v1_alt 220547 3 + 223625 CCC s panTro5.chr2A 1515341 3 + 111504155 CCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1488758 3 + 114371477 CCC i panPan2.chr2A C 0 C 0 s cerAty1.NW_012000820v1 1476182 3 - 10304083 CTC i cerAty1.NW_012000820v1 C 0 I 1 s calJac3.chr14 1454363 1 - 108792865 --c i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1283316 1 - 7082604 --C i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 197366 3 + 287728 ccc i aotNan1.NW_018513311v1 I 141 C 0 e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1047144 1078 - 2200435 I e chlSab2.chr14 1549081 82 - 107702431 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M a score=43940.000000 s hg38.chr2_KI270774v1_alt 220550 21 + 223625 TGCAGGGAGTGGCTTCT---CCCT s panTro5.chr2A 1515344 21 + 111504155 TGCAGGGAGTGGCTTCT---CCCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1488761 21 + 114371477 TGCAGGGAGTGGCTTCT---CCCT i panPan2.chr2A C 0 C 0 s cerAty1.NW_012000820v1 1476186 24 - 10304083 TGCAGGGAGTGGCTTCTTCACCCT i cerAty1.NW_012000820v1 I 1 C 0 s chlSab2.chr14 1549163 24 - 107702431 TGCAGGGAGTGGCTTCTTCACCCT i chlSab2.chr14 I 82 C 0 s manLeu1.NW_012103754v1 1048222 24 - 2200435 TGCAGGGAGTGGCTTCTTCACCCT i manLeu1.NW_012103754v1 I 1078 C 0 s calJac3.chr14 1454364 21 - 108792865 CGCAGGGAGAGGCTTCTCCAC--- i calJac3.chr14 C 0 I 3 s saiBol1.JH378218 1283317 21 - 7082604 CGCAGGGAGAGCCTTCTCTAC--- i saiBol1.JH378218 C 0 I 3 s aotNan1.NW_018513311v1 197369 21 + 287728 cgcagggagaggcttctccac--- i aotNan1.NW_018513311v1 C 0 I 3 e cebCap1.NW_016107827v1 1378763 56 + 1864846 I e colAng1.NW_012118821v1 1467104 919 - 13651311 M e macNem1.NW_012011978v1 1513678 2828 + 3644372 M a score=225929.000000 s hg38.chr2_KI270774v1_alt 220571 69 + 223625 GTGAATCTCTCCTCCCTTCTTTGCCCAGAAGCATGTCTCAATTAGTAA-GAGTGCAGTTAATATTTCTCA s panTro5.chr2A 1515365 69 + 111504155 GTGAATCTCTCCTCCCTTCTTTGCCCAGAAGCATGTCTCAATTAGTAA-GAGTGCAGTTAATATTTCTCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1488782 69 + 114371477 GTGAATCTCTCCTCCCTTCTTTGCCCAGAAGCATGTCTCAATTAGTAA-GAGTGCAGTTAATATTTCTCA i panPan2.chr2A C 0 C 0 s cerAty1.NW_012000820v1 1476210 70 - 10304083 GTCAATCTCTCCTCCCTCCTTTGCCCAGAAGCATCTTGTGATTAGTAAGGAGTGCAGTAAATATTTCTCA i cerAty1.NW_012000820v1 C 0 I 13 s chlSab2.chr14 1549187 70 - 107702431 GTGAATCTCTCCTCCCTCCTTTGCCCAGAAGCATCTTGTGATTAGTAAAGAGTGCAGTAAATATTTCTCA i chlSab2.chr14 C 0 I 13 s manLeu1.NW_012103754v1 1048246 70 - 2200435 GTGAATCTCTCCTCCCTCCTTTGCCCAGAAGCATCTTGTGATTAGTAAAGAGTGCAGTAAATATTTCTCA i manLeu1.NW_012103754v1 C 0 M 4410 s calJac3.chr14 1454388 69 - 108792865 GTGAATCTCTCCTCCCTCCTTTGCCTAGAAGCATCTTCCGATTAGTAA-GCCTTCAATAAATACTTCTCA i calJac3.chr14 I 3 C 0 s saiBol1.JH378218 1283341 69 - 7082604 GTGAATCTCTCCTCCCTCCTTTGCCTAGAAGCATCTTGTGGTTAGTAA-GCCTTCGATAAATATTTCTCA i saiBol1.JH378218 I 3 C 0 s cebCap1.NW_016107827v1 1378819 69 + 1864846 GTGAATCTCTCCTCCCTCCTTTgcctagaagcatcttgcgattagtaa-gccttcaataaatatttctca i cebCap1.NW_016107827v1 I 56 C 0 s aotNan1.NW_018513311v1 197393 69 + 287728 GAGACTCTCTCCTCCCTCCTTTGCCCAGAAGCATCTTGCGATTACTAA-GCCTTCAATAAATATTCCTCA i aotNan1.NW_018513311v1 I 3 C 0 e colAng1.NW_012118821v1 1467104 919 - 13651311 M e macNem1.NW_012011978v1 1513678 2828 + 3644372 M a score=144177.000000 s hg38.chr2_KI270774v1_alt 220640 61 + 223625 TCTTAAGGTGGTGCTCCGACCTGATACAAAGGAAAGCGGGTTGAATTCAGAGGCACGGGCA s panTro5.chr2A 1515434 61 + 111504155 TCTTAAGGTGGTGCTCCGACCTGATACAAAGGAAAGCGGGTTGAATTCAGAGGCACGGGCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1488851 61 + 114371477 TCTTAAGGTGGTGCTCCGACCTGATACAAAGGAAAGCGGGTTGAATTCAGAGGCACGGGCA i panPan2.chr2A C 0 C 0 s cerAty1.NW_012000820v1 1476293 61 - 10304083 TGTTAACAAGGTGCTCCGACCTGATACAAGGGAAAAATGGTTGAATTCAGAGGGATGGGCA i cerAty1.NW_012000820v1 I 13 I 309 s chlSab2.chr14 1549270 61 - 107702431 TGTTAACAAGGTGTTCCTACCTGATACAAGGGAAAAATGGTTGAATTCAGAGGGATGGGCA i chlSab2.chr14 I 13 C 0 s calJac3.chr14 1454457 61 - 108792865 TATTAAGGAGTCGCTCTCACCTGATACGAAGGAAAGGGGGTTGAATTCAGAGGCACAGACA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1283410 61 - 7082604 TATTAATGAGGCCCTCTCACCTGACGCAAAGGAAAGGGGGTTCAATTCAGAGGCACAGACA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1378888 61 + 1864846 tattaatgaGGTGCTCTCACCTGATACAAAGGAAAGGGGGTTGAATTCAGAGGCACAGACA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 197462 54 + 287728 TATTAACGAGGCGCTCTCACCTGATACAAA-------GGGTTGAATTCAGAGGCACAGACA i aotNan1.NW_018513311v1 C 0 C 0 e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1048316 4410 - 2200435 M e macNem1.NW_012011978v1 1513678 2828 + 3644372 M a score=3356.000000 s hg38.chr2_KI270774v1_alt 220701 2 + 223625 TA s panTro5.chr2A 1515495 2 + 111504155 TA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1488912 2 + 114371477 TA i panPan2.chr2A C 0 C 0 s chlSab2.chr14 1549331 2 - 107702431 CA i chlSab2.chr14 C 0 C 0 s calJac3.chr14 1454518 2 - 108792865 CA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1283471 2 - 7082604 CA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1378949 2 + 1864846 CA i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 197516 2 + 287728 CA i aotNan1.NW_018513311v1 C 0 C 0 e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1048316 4410 - 2200435 M e cerAty1.NW_012000820v1 1476354 309 - 10304083 I e macNem1.NW_012011978v1 1513678 2828 + 3644372 M a score=13500.000000 s hg38.chr2_KI270774v1_alt 220703 3 + 223625 CCC s panTro5.chr2A 1515497 3 + 111504155 CCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1488914 3 + 114371477 CCC i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1516594 3 + 3644372 ccC i macNem1.NW_012011978v1 M 2828 C 0 s cerAty1.NW_012000820v1 1476663 3 - 10304083 ccC i cerAty1.NW_012000820v1 I 309 C 0 s chlSab2.chr14 1549333 3 - 107702431 CCC i chlSab2.chr14 C 0 I 310 s calJac3.chr14 1454520 3 - 108792865 CCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1283473 3 - 7082604 CCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1378951 3 + 1864846 CCC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 197518 3 + 287728 CCC i aotNan1.NW_018513311v1 C 0 C 0 e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1048316 4410 - 2200435 M a score=16181.000000 s hg38.chr2_KI270774v1_alt 220706 6 + 223625 TGTCCT s panTro5.chr2A 1515500 6 + 111504155 TGTCCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1488917 6 + 114371477 TGTCCT i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1516597 6 + 3644372 TGTCCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1476666 6 - 10304083 TGTCCC i cerAty1.NW_012000820v1 C 0 C 0 s calJac3.chr14 1454523 6 - 108792865 TGCCCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1283476 6 - 7082604 TGCCCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1378954 6 + 1864846 TGCCCC i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 197521 6 + 287728 TGCCCC i aotNan1.NW_018513311v1 C 0 C 0 e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1048316 4410 - 2200435 M e chlSab2.chr14 1549336 310 - 107702431 I a score=153413.000000 s hg38.chr2_KI270774v1_alt 220712 56 + 223625 TGTTTCTAAAGTGTTCATGAAGAAGATCGAATTCAAATGGTGAAATATCCATATAT s panTro5.chr2A 1515506 56 + 111504155 TGTTTCTAAAGTGTTCATGAAGAAGATTGAATTCAAATGGTGAAATAGCCATATAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1488923 56 + 114371477 TGTTTCTAAAGTGTTCATGAAGAAGATTGAATTCAAATGGTGAAATAGCCATATAT i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1516603 56 + 3644372 TGTTTTTAAAGAGTTTATGAAGAAGCTCGAATTCAAATGGTGAAATAGCCATATAT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1476672 56 - 10304083 TGTTTTTAAAGCGTTTATGAAGAAGCTCGAATTTAAATGGTGAAATAGCCATATAT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1549646 56 - 107702431 TGTTTTTAAAGCGTTTATGAAGAAGCTCGAATTCAAATGGTGAAAGAGCCATATAT i chlSab2.chr14 I 310 C 0 s calJac3.chr14 1454529 56 - 108792865 GGTTTCTAAAGTGTTTATGAAGAAACTCGAGTTCAGTTGGTGAAACAGCCATACAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1283482 56 - 7082604 TGTTTCTAAAGTGCCTATGAAGAAACTCGAGTTCAGTGGGTGAAACAGCCATACAT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1378960 36 + 1864846 TGTTTCTAAAGT--TTATGAAGAAACT------------------CAGCCACACAT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 197527 55 + 287728 TGTTTCTAAAGTGTTTATGACGAAACA-GGGTTCAGTTGGTGAAACAGCCATACAC i aotNan1.NW_018513311v1 C 0 C 0 e colAng1.NW_012118821v1 1467104 919 - 13651311 M e manLeu1.NW_012103754v1 1048316 4410 - 2200435 M a score=707929.000000 s hg38.chr2_KI270774v1_alt 220768 175 + 223625 GCAATTGTATAGAAAAGTCAGGATTATTTGACAAGGATTGTTTTTGATGCTTTTATGCAATTCAGAACCTCAATGAATATAGAAAATAATTTAAAAAGACATAAGAGCTCTCTAGATTGAAATAAGCATGGTGCTTATAAAACAATGGTGAACAGTGAATGCCAATTATTTTAAT s panTro5.chr2A 1515562 165 + 111504155 GCAATTGTATAGACAAGTCAGGATTACTTGACAAGGATTGTTTTTGATGCTTTTATGCAATTCAGAACCTCAATGAATATAGAAAA----------AGACATAAGAGCTCTCTAGATTGAAATAAGCATGGTGCTTATAAAACAATAGTGAACAGTGAATGCCAATTATTTTAAT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1488979 165 + 114371477 GCAATTGTATAGACAAGTCAGGATTACTTGACAAGGATTGTTTTTGATGCTTTTATGCAATTCAGAACCTCAATGAATATAGAAAA----------AGACATAAGAGCTCTCTAGATTGAAATAAGCATGGTGCTTATAAAACAATAGTGAACAGTGAATGCCAATTATTTTAAT i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1516659 175 + 3644372 GCAATTGTATAGAAAAGTCAGGATTATTTGACAAGGATTGTTTTCAATGCTTTTACACAATTCAGAACCTCAATGAATATAAAAAATAATTTAAAAAGACGTAAGACCACTCTAGATTGAAATGAGCATAGTGCTTGTAAAACAATAGTGAACAGTGAATGCAAAATATTTTAAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1476728 175 - 10304083 GCAATTGTATAGAAAAGTCAGGATTATTTGACAAGGATTGTTTTCAATGCTTTTACACAATTCAGAACCTCAATGAATATAGAAAATAATTTAAAAAGAGGTAAGACCACTCTAGATTGAAATGAGCATAGTGCTTGTAAAACAATAGTGAACAGTGAATGCAAAATATTTTAAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1549702 175 - 107702431 GCAATTGTATAGAAAAGTCAGGATTACTTGACAAGGATTGTTTTCAATACTTTTACACGATTCAGAACCTCAATGAATATAGAAAATAATTTTAAAAGACGTAAGACCGCTCTAGATTGAAATGAGCATAGTGCTTGTAAAACAATAGTGAACAGTGAATGCAAAATATTTTAAT i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1468031 175 - 13651311 GCAATTGTATAGAAAAGTCAGGATTATTTGACAAGGATTGTTTTCAATGCTTTTACACGATTCAGCACCTCAATGAATATAGAAAATAATTTAAAAAGATATAAGACCTCTCTAGATTGAAATGAGCATAGTGCTTGTAAAACAATAGTGAACAGTGAATGCAAAATATTTTAAT i colAng1.NW_012118821v1 M 919 C 0 s calJac3.chr14 1454585 174 - 108792865 GCAATTGTATAGAAAAGTCAGGATTATTTGACAAGGATTGTTTCCCATGCTTTTACAAGATTCAGAACTTCAATGAATATAGTGAATAATTTTAAAAGACATAAGACCGCTCTAGATTGAAAGGAGCAT-GTGTTTATAAAACAACAGTGAACAGTGAATGCAAAGTATTTTCAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1283538 168 - 7082604 GCAATTCTATAGAAAAGTCAGGATTATTTGACAAGGATTGTTTCCCATGCTTTTAGGAGATTCAGAACCTCAGTGAATACAGTGAATAATTTTAAAAGACATAAGACCACTCTAGATTGAACG-------GTGTTTATAAAACAGCAGTGAACAGTGAATGCAAAATATTTTAAT i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1378996 175 + 1864846 GCAGTTCTGTAGAAAAGTCAGGATTATTGGACAAGGATTGTTTCCCATGCTTTTATGAGATTCAGAACCTCAATGAATAGAGTGAGTAATTTTAAAAGACATAAGACCACTCTAGATGGAAAGGAGCATGGTGTTTATAAAACAGCAGTGAACAGTGAATGCAAAATGTTTTAAT i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 197582 175 + 287728 GCAATTCTATAGAAGAGTCAGGATTATTTGACAGGGATTGTTTCCCATGCTTTTACGAGATTCAGAACCTCAATGAATATAGCGAATAATTTTAAAAGACTTAAGACTACTCTAGATTGAAAGGAGCATGGTGTTTATAAAACAGCAGTGAACAGTGAATGCAAAATATTTTAAT i aotNan1.NW_018513311v1 C 0 C 0 e manLeu1.NW_012103754v1 1048316 4410 - 2200435 M a score=1285767.000000 s hg38.chr2_KI270774v1_alt 220943 267 + 223625 TTAAATTTCTATTATGCAGCAAATTCATAAAATGGGGAAAGTCTTTTTTCAACATTTCCAAGACATGCTCTGTTAAGACATGG--TTGCTTCAGGT-GGCTTTTACTTGGGATATTGAGAGGTAA---GGCAGAGTGGTGATGGTTCAGGCTGAGGAGGGCGagggctgccataacaaagaaccacacgtttggtggcttaaagcaacagacgttgatgttctcacagttctggagaccagaaga-gcaagtcacggtgttggcagggctttgc s panTro5.chr2A 1515727 267 + 111504155 TTAAATTTCTATTATGCAGCAAATTCATAAAATGGGGAAAGTCTTTTTTCAACATTTCCAAGACATGCTCTGTTAAGACATGG--TTGCTTCAGGT-GGCTTTTACTTGGGATATTGAGAGGTAA---GGCAGAGTGGTGATGGTTCAGGCTGAGGAGGGCGagggctgccgtaacaaagaaccacacatttggtggcttaaagcaacagacattgatgctctcacagttctggagaccagaaga-ccaagtcacggtgttggcagggctttgc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1489144 267 + 114371477 TTAAATTTCTATTATGCAGCAAATTCATAAAATGGGGAAAGTCTTTTTTCAACATTTCCAAGACATGCTCTGTTAAGACATGG--TTGCTTCAGGT-GGCTTTTACTTGGGATATTGAGAGGTAA---GGCAGAGTGGTGATGGTTCAGGCTGAGGAGGGCGagggctgccgtaacaaagaaccacacatttggtggcttaaagcaacagacattgatgctctcacagttctggagaccagaaga-ccaagtcatggtgttggcagggctttgc i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1516834 273 + 3644372 TTAAATTTCTATTATGCAGCAAATTCATAAAGTAGGGAAAGTCTTTTTCCAACACTTTCAAGACATTTTCTGTTAAGACATGGTCTTTCTTCAGGT-GGCTTTTACTTGGGATATTGAGAGGTAAGATGGCGGAGTGGTGACAGTTCAGGTTGAGGAAGGCGagggctgccgtaacaaagaaccacacgttaggtggcttaaagcaacagacattgattctctcaaagttctggaggccagaagacccaagtcacagtgttggcagggctgtgc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1476903 273 - 10304083 TTAAATTTCTATTATGCAGCAAATTCATAAAGTAGGGAAAGTCTTTTTCCAACATTTTCAAGACATTTTCTGTTAGGACATGGTCTTTCTTCAGGT-GGCTTTTACTTGGGATATTGAGAGGTAAGATGGCGGAGTGGTGACAGTTCAGGTTGAGGAAGGCGagggctgccgtaacaaagaaccacacgttaggtggcttaaagcaacagacgttgattctctcacagttctggaggctagaagacccaagtcacggtgttggcagggctgtgc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1549877 273 - 107702431 TTAAATTTCTATTTTGCAGCAAATTCATAAAGTAGGGAAAGGCTTTTTCCAACATTTTCAAGACAGTTTCTGTTAAGACATGGGCTTTCTTCGGGT-GGCTTTTACTTGGGATATTGAGAGGTAAGACGGCGGAGTGGTGACAGTTCAGGCTGAGGAAGGCGagggctgccgtaacaaagaaccacacgtttggtggcttaaagcaacagacattgattctctcacagttctggaggccagaagacccaagtcacggtgttggctgggctgtgc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1052729 273 - 2200435 TTAAATTTCTATTATGCAGCAAATTCATAAAGTAGGGAAAGTCTTTTTCCAACATTTTCAAGACATTTTCTGTTAGGACATGGTCTTTCTTCAGGT-GGCTTTTACTTGGGATATTGAGAGGTAAGATGGCGGAGTGGTGACAGTTCAGGTTGAGGAAGGCGagggctaccgtaacaaagaaccacacattaggtggcttaaagcaacagacattgattctctcacagttctggaggccagaagacccaagtcacggtgttggcagggctgtgc i manLeu1.NW_012103754v1 M 4410 C 0 s colAng1.NW_012118821v1 1468206 273 - 13651311 TTAAATTTCTATTATGCAGCAAATTCATGAAGTAGGGAAAGGCTTTTTCCAACATTTTCAAGACATTTTCTGTTAAGACATGGTCTTTCTTCAGGT-GGCTTTTACTTGGGATATTGAGAGGTAAGATGGCGGAGTGGTGACGGTTCAGGTTGAGGAGGACGagggctgccgtaacaaagaaccacacgtttggtggcttaaagcaacagacattgattctctcacagttctggaggtcagaagacccaagtcacagtgttggcagggctgtgc i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1454759 271 - 108792865 TGAAATTTCTATTATGCAGCAAATTCATAAAATAAGGAAAGTCTTTTTCTGACGTTTTCAAGACATGTTCTGTTAAATCATGGCCTTTCTTCAGGTGGGCTTTTCCCTGGGATATTGAGAGGTAAGACATTGGCATGGCAATGGCCCAGGCTGAGGAGGGCAGgggctggcatcacaaacaac--catgtttggtggcttagag-agcagacgttgattctctcacggttctgaaggcaagaagacccaagtcacgatgttggcagggccgggc i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1283706 270 - 7082604 TGAAATTTCTATCATGCAGCAAATTCATAAAATAAGGAAAGTCTTTTTCTGACATTTTCAAGACATGTTCTATTAAATCATGGCCTTTCTTGAGGTGGGTTTTTCCCTGGGATACTGAGACGTAA-ATGTTGGCATGGCAATGGCCCAGGCTGAGGAGGGTGGgggctgccatcacaaacaac--cacgtttggtggcttagag-agcagacgtcgattctctcacagttctggaggtcagaagacccaagtcccgctgctggcagggctgggc i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1379171 269 + 1864846 TGAAATTTCTATTATGCAGCAAATTCTTAAAATAAGG-AAGTATTTTTCTGACATTTTCAAGACATGTTCTGTTAAAT-ATGGCCTTTCTTCAGCTGGGCTTTTCCTTGGGATACTGAGAGGTAAGACGTTGGCATGGCGATGGCCCAGGCTGAGGAGGGTAGgggctgccatcacaaacaac--cacgtttggtggcttagag-ggcagacgttgattctctcacagttctggaggccagaagacccaagtcctggtgctggcagggccgggc i cebCap1.NW_016107827v1 C 0 C 0 s aotNan1.NW_018513311v1 197757 270 + 287728 TGAAATTTCTATTATGCAGCAAATTCACAAAATAAGGAAAGTCTTTTTCTGACGTTTTCAAGACATGTTCTGTTAAATCATGGCCTCTCTTCAGGTGGGCTTTTCCTTGGGATATTGAGAGGTAAGACGTTGGCATGGCAATGGCCCAGGCTGAGGACGGTAGgggctgccgtcacagacaac--cacgtttggtggcttagag-agcagacat-gattctctcacggttctggaggccagaagatccaagtcgcagtgttggcagggccgggc i aotNan1.NW_018513311v1 C 0 I 28 a score=34758.000000 s hg38.chr2_KI270774v1_alt 221210 28 + 223625 tccccccg--------------------------------------------------------------------------------aaggttggaaggacgaatgc s panTro5.chr2A 1515994 28 + 111504155 tcccccca--------------------------------------------------------------------------------aaggttggaaggacgaatgc i panTro5.chr2A C 0 I 1 s panPan2.chr2A 1489411 28 + 114371477 tcccccca--------------------------------------------------------------------------------aaggttggaaggacgaatgc i panPan2.chr2A C 0 I 1 s macNem1.NW_012011978v1 1517107 108 + 3644372 tcccccgaaggctgacaggacgaatgctgccttgcACACCCCGTCTTTGGTGCCCTGGtcacggtgttggcagggctgtgctcccccgaaggctgacaggacgaatgc i macNem1.NW_012011978v1 C 0 I 1 s cerAty1.NW_012000820v1 1477176 26 - 10304083 tcccccgaaggccgata----------------------------------------------------------------------------------gacgaatgc i cerAty1.NW_012000820v1 C 0 I 1 s chlSab2.chr14 1550150 61 - 107702431 tcccccgaaggctg----------tgctcccccg-------------------------------------aaggctgtgctcccccaaaggctggcaggacgaatgc i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012103754v1 1053002 27 - 2200435 tcccccg---------------------------------------------------------------------------------aaggctgataggatgaatgc i manLeu1.NW_012103754v1 C 0 I 1 s colAng1.NW_012118821v1 1468479 27 - 13651311 tcccccg---------------------------------------------------------------------------------aaggctgacaggacgaatgc i colAng1.NW_012118821v1 C 0 I 1 s calJac3.chr14 1455030 27 - 108792865 -ccctcca--------------------------------------------------------------------------------aaggctggtggtaccaacgc i calJac3.chr14 C 0 I 1 s saiBol1.JH378218 1283976 27 - 7082604 -ccctcca--------------------------------------------------------------------------------aaggctggtggtaccaatgc i saiBol1.JH378218 C 0 I 1 s cebCap1.NW_016107827v1 1379440 27 + 1864846 -ccctcca--------------------------------------------------------------------------------aaggctggtggtaccaatgc i cebCap1.NW_016107827v1 C 0 I 1 e aotNan1.NW_018513311v1 198027 28 + 287728 I a score=1709040.000000 s hg38.chr2_KI270774v1_alt 221238 362 + 223625 gccttgcacatccagcctttggtgccctgctggtgttcactggcattgcttggcctacagactcctcacgccaacctctccctctgtctttacccggccttctcccctgcgtgtctgtattcaaatgcccctattcctataagggcaccagtcctgctggattccaggttccaccctaccccagtatagactcaccctaactaattacatctgaaaaaaaccttacttccaggcaaggtaacattcccaagttctgggtggatgtgactttgaaatGATTATCAAGTAGATCCAGTTCCGTTTACAGTAATGAGCAGACAGTGAATGAGAAATTAATGTGCTTTCACATCGCACGaaca-cc-t s panTro5.chr2A 1516023 362 + 111504155 gccttgcacacccagcctttggtgccctgctggtgttcactggcattgcttggcctacagactcatcacgccaacctctccctctgtctttacccggccttctcccctgtgtgtctgtgttcaaatgtccctcttcttataagggcaccagtcctgctggattccaggttccaccctaccccagtatagactcaccctaactaattacatctgaaaaaaaccttacttccaggcaaggtaacattcccaagttctgggtggatgtgacttTGAAATGATTATCAAGTAGATCCAGTTCCGTTTACAGTAATGAGCAGACAGTGAATGAGAAATTAATGTGCTTTCACATCGCACGaaca-cc-t i panTro5.chr2A I 1 C 0 s panPan2.chr2A 1489440 362 + 114371477 gccttgcacacccagcctttggtgccctgctggtgttcactggcattgcttggcctacagactcatcacgccaacctctccctctgtctttacccggccttctcccctgtgtgtctgtgttcaaatgtccctcttcttataagggcaccagtcctgctggattccaggttccactctaccccagtatagactcaccctaactaattacatctgaaaaaaaccttacttccaggcaaggtaacattcccaagttctgggtggatgtgacttTGAAATGATTATCAAGTAGATCCAGTTCCGTTTACAGTAATGAGCAGACAGTGAATGAGAAATTAATGTGCTTTCACATCGCACGaaca-cc-t i panPan2.chr2A I 1 C 0 s macNem1.NW_012011978v1 1517216 361 + 3644372 gccttgcaaaccccgtctttggtgccctgctggtgtccgctggcaccacttggcctacaggctcatcatgccaacttctgcctctgtctctaccccgccttctcccctgtgtgtctgtgttcaaatgcccctcttcttataagggcaccagtcctgctggattccagtttccaccctatcccagtatagactcaccctaactaattgcatctg-aaaaaaccttacttccagacaaggtcacattcccacattctgggtggatgtgactttgaaatgattatcaagtagatccagttccatttacaataATGAGCAGAGAGTGAATGAGGCATTAATGCACTTTCACATGGCACAAACA-CC-T i macNem1.NW_012011978v1 I 1 C 0 s cerAty1.NW_012000820v1 1477203 361 - 10304083 gccttgcacaccccgtctttggtgccctgctggtgtccgctggcaccacttggcctacagactcatcatgccaacctctgcctctgtctttacccggccttctcccctgcatgtctgtgttcaaatgcccctcttcttataagggcaccagtcctgctggattccagtttccaccctatcccagtatagactcaccctaactaattgcatctg-aaaaaaccttacttccagacaaggtcacattcccacgttctgggtggatgtgacttTGAAATGATTATCAAGTAGATCCAGTTCCATTTACAGTAAGGAGCAGAGAGTGAATGAGGCATTAATGCACTTTCACATGGCACGaaca-cc-t i cerAty1.NW_012000820v1 I 1 C 0 s chlSab2.chr14 1550212 361 - 107702431 tccttgcacaccccgtctttggtgccctgctggtgttcgctggcaccgcttggcctacagactcatcgtgccaacctctgcctctgtctttacccggccttctcccctgcgtgtctgtgttcaaatgcccctcttcttataagggcaccagtcctcctggattccgggttccaccctatcccagtatagactcaccctaactaattgcatctg-aaaaaaccttacttccagacaaggtcacattcccacattctgggtggatgtgactttgaaatgattatcaagtagacccagttcCATTTACAGTAATGAGCAGAGAGTGAATGAGGCATTAATGCACTTTCACATGGCACGaaca-cc-t i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012103754v1 1053030 360 - 2200435 gccttgcacaccccgtctttggtgccctgctggtgtcc-ctggcaccacttggcctacagactcatcatgccaacctctgcctctgtctttacccggccttctcccctgcgtgtctgtgttcaaatgcccctcttcttataagggcaccagtcctgctggattccaggttccaccctatcccgatatagactcaccctaactaattgcatctg-aaaaaaccttacttccagacaaggtcacattcccacgttctgggtggatgtgacttTGAAATGATTATCAAGTAGATCCAGTTCCATTTACAGTAAGGAGCAGAGAGTGAATGAGGCATTAATGCACTTTCACATGGCACGAACA-CC-T i manLeu1.NW_012103754v1 I 1 C 0 s colAng1.NW_012118821v1 1468507 357 - 13651311 tccttgcacaccccgtctttggtgccctgctggtgttcgctggcactgcttggcctacagactcatcatgccaacctctgcctctgtctttacccgaccttctcccctgcgtgtctgtgttcaaatgcccctcttcttataagggcaccagtcctgctggattccaggttccaccctatcccagtatagactcg----aactaattgcatctg-aaaaaacttgacttccagacaaggtcacattcccacgttctgggtggatgtgacttTGAAATGATTATCAAGTAGATCCAGTTCCATTTACAGTAATGAGCAGAGAGTGAATGAGGCATTAATGTACTTTCACATGGCACGaaca-cc-t i colAng1.NW_012118821v1 I 1 C 0 s calJac3.chr14 1455058 357 - 108792865 gcctggcacagccagcctttggtgctctgctggtgctcgctggcattcctgggcctgtagactcaccagtccaccctctgctgctgtcctgacccggccttctcccc--cgtgtctgtgctcgcattcccctcctcttaaaagggcaccagtgctactgaattccagcttccaccctgccccggcgtaga-tcatcctaactaattacatgtg-gaagaacctaatttccagacgaggtcacact-cccagttctgggTGGATGTGGCTTTGAAATGATTATCAAGTAGATCCACTTCTGTTTACAGTAAGGAGCAGGGAGTGGATGAGAAGTTAACGCACATGCACATGGCGGGAACACCC-- i calJac3.chr14 I 1 C 0 s saiBol1.JH378218 1284004 353 - 7082604 gcctggcacacccagcctttggtgctctgctggtgcttgctggcattcctgggcctgtagactcaccagtccaacctctgctgctgtcctgacccggccttctcccc--cgtgtctgtgctcacattccccgactcttacaagggcacgagtcctcctggattccagcgtccaccctgccccggtgtagactcatcctaactaattacatgtg-gaagaactttatttccagacaaggtcacac--ccaagttctgagTGGACGTGGCTTTGAAATGATTGTCAAGTGGAT-CAGTTCTGTTTACAGCAATGAGCA--GAGTGAATGAGAATTTGTCGCACGTCCGCACGGCAGGAACG-CC-- i saiBol1.JH378218 I 1 C 0 s cebCap1.NW_016107827v1 1379468 357 + 1864846 gcctggcacacccagcctttggtgctctgctggtgctcgctggcattcctgggcctgtagactcaccagtccaacctctgctgctgtcctgacccggccttctcccc--cgtgtctgtgctcacattcccctcctcttaaaagggcaccagtcctcctggattccagcttccatcctgccccagtgtagactcatgctaactaattacatgtg-aaagaaccttatttccagacaaggtcacactcccaagttctgggtggatgtgacttTGAAATGATCATCAAGTGGAT-CAGTTCTGTTTACAGCAATGAGCAGAGAGTGAATGAGAAACTAACGCACATCCGCATGGCAGGGGCa-cc-- i cebCap1.NW_016107827v1 I 1 C 0 s aotNan1.NW_018513311v1 198055 345 + 287728 gcctggcacagccagcctttggtgctc-----------gctggcattcctgggcctgtagact--ccagtccaacctctgctgctgtcctgacccggccttctcccc--cgtgtctgtgctcacattcccctcctcttaaaagggcaccagtcctactggattccagcttccgccctgccccggtgtagactcatcctaactaattacatgtt-gaagaaccttatttccagacaaggtcatactcccaagttc-gggtggatgtgactttgaaatgattatcaagtagatccagttctgtttacagcaATGAGCAGAGAGCGAGTGAGAATTTAACGCACATCCGCGTGGCAGGAACA-CGT- i aotNan1.NW_018513311v1 I 28 I 11 a score=92729.000000 s hg38.chr2_KI270774v1_alt 221600 27 + 223625 gaccttcactgaattttaatagaagct s panTro5.chr2A 1516385 27 + 111504155 gaccttcactgaattttaatagaagct i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1489802 27 + 114371477 gaccttcactgaattttaatagaagct i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1517577 27 + 3644372 GAcattcactgaattttaatagaagct i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1477564 27 - 10304083 gacattcactgaattttaatagaagct i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1550573 27 - 107702431 gacattcactgaattttaatagaagct i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1053390 27 - 2200435 GAcattcactgaattttaatagaagct i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1468864 27 - 13651311 gacatccactgaattttaatagaagct i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1455415 26 - 108792865 CACACCCACTGAGTTCTAACAGCAGc- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1284357 26 - 7082604 GACGTCTGCTGAGTTTTGGCAGCAGC- i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1379825 26 + 1864846 gacatccactggattttaatagcccc- i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 198400 11 + 287728 I a score=1617707.000000 s hg38.chr2_KI270774v1_alt 221627 332 + 223625 ggcattggtgctaactccttacagactttatgtcagtgtattctcactgaaggaagttgctattttatcccactttacgaatgagaaaactgagatgcggagaggtcaCCAAGTCAAACTCAAGCGACACCCCAGCCCCCCTCGGTGATCAGGCTGAAGCGATGACTAAATGCCATTTGCTCCT-----AATGACACCGTCACAAGCACTGAAGCCACCAAGGACCGTTGGGCCTGTACAGAGGAGAGGCAGACTCAGGCCCTCCCCACTGACAGGAGGGCTGTCTTCCATGTACACCTAG-GTCGGAGTCCGCAAGGGTGGGGCGGTGACGGTGCAC s panTro5.chr2A 1516412 330 + 111504155 ggcattggtgctaactccttacagactttatgtcagtggattctcactgaaggaagttgctattttatcccactttacgaatgagaaaactgagatgcggagaggtcaCCAAGTCAAACTCAAGCGACACCCCAGCCCCCCTCGGTGATCAGGCTGAAGCGATGACTAAATGCCATTTGCTCCT-----AATGACA--GTCATAAGCACTGAAGCCACCAAGGACCATTGGGCCTGTACAGAGGAGAGGCAGACTCAGGCCCTCCCCACGGACAGGAGGGCTGTCTTCCATGTACACCTAG-GTCAGAGTCCGCAAGGGTGGGGCGGTGACTGTGCAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1489829 330 + 114371477 ggcattggtgctaactccttacagactttatgtcagtggattctcactgaaggaagttgctattttatcccactttacgaatgagaaaactgagatgcggagaggtcaCCAAGTCAAACTCAAGCGACACCCCAGCCCCCCTCGGTGATCAGGCTGAAGCGATGACTAAATGCCATTTGCTCCT-----AATGACA--GTCATAAGCACTGAAGCCACCAAGGACCGTTGGGCCTGTACAGAGGAGAGGCAGACTCAGGCCCTCCCCACGGACAGGAGGGCTGTCTTCCATGTACACCTAG-GTCAGAGTCCGCAAGGGTGGGGCGGTGACTGTGCAC i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1517604 332 + 3644372 ggcattggtgctaactccttacacactttatgtcagtagattctcactgaaggaagttgctattttatcccactttacgaatgagaaaactgagatgcggagaggtcaCCAAGTCAAACTCAAGCAACACCCCAGTCCCCCGTGGTGATCAGGCTGAAGCGATGACTAAATGCCATTTGCTCCT-----GATGACACCATCACAAGCACTGAAGCCACCAAGGGCTGTTGGGCCTGTGCAGAGGAGAGGCAGACTCAGGCCCTCCCCATGGACGGGAGGGCTGTCTTCCATGTACACCTTG-GTCGGAGTCCGCAAGGGTGGGGAGGTGACTGTGCAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1477591 332 - 10304083 ggcattggtgctaactccttacacactttatgtcagtggattctcactggaggaagttgctattttatcccactttataaatgagaaaactgagatgcggagaggtcaCCAAGTCAAACTCAAGCAACACCCCAGTCCCCCGTGGTGATCAGGCTGAAGCGATGACTAAATGCCATTTGCTCCT-----GATGACACCGTCACAAGCACTGAAGCCGCCAAGGGCTGTTGGGCCTATGCAGAGGAGAGGCAGACTCAGGCCCTCCCCATGGACGGGAGGGCTGTCTTCCATGTACACCTTG-GTCGGAGTCCGCAAGGGTGGGGAGGTGACTGTCCAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1550600 332 - 107702431 ggcattggtgccaactccttacacactttatgtcagtggattctcactgaaggaagttgctattttatcccactttacgaatgagaaaactgagaggcggagaggtcaCCAAGTCAAACTCAAGCAACACCCCAGTCCCCCGTGGTGATCAGGCTGAAGTGATGACTAAATGCCATTTGCTCCT-----GATGACACCATCACAAGCACTGAAGCCACCAAGGGCTGTTGGGCCTGTACAGAGGAGAGGCAGACTCAGGCCCTCCCCATGGACGGGAGGGCAGTCTTCCATGTACACCTTG-GTCGGAGTCCGCAAGGGTGGGGAGGTGACTGTGCAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1053417 332 - 2200435 ggcattggtgctaactccttacacactttatgtcagtggattctcactgaaggaagttgctattttatcccactttacaaatgagaaaactgagatgcggagaggtcaCCAAGTCAAACTCAAGCAACACCCCAGTCCCCCGTGGTAATCAGGCTGAAGCGATGACTAAATGCCATTTGCTCCT-----GATGACACCGTCACAAGCACTGAAGCCACCAAGGGCTGTTGGGCCTGTGCAGAGGAGAGGCAGACTCAGGCCCTCCCCATGGACGGGAGGGCTGTCTTCCATGTACACCTTG-GTCGGAGTCCGCAAGGGTGGGGAGGTGACTGTCCAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1468891 332 - 13651311 ggcattggtgctaactccttacacactttatgtcagtggattctcactgaaggaagttgctattttatcccactttacaaatgagaaaactgagatgcggagaggtcaCCAAGTCAAACTCAAGCAACACCCCAGTCCCCCGTGGTGATCAGGCCGAAGCGATGACTAAATGCCATTTGCTCCT-----GATGACACCATCACAAGCACTGAAGCCACCAAGGACCGTTGCGCCTGTACAGAGGAGAGGCAGACTCAGGCCCTCCCCATGGACGGGAGGGCTGTCTTCCATGTACACCTTG-GTCAGAGTCCGCAAGGGTGGGGAGGTGACTGTGCAC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1455441 327 - 108792865 agtctcggtgctaactcctggcactcttgatgtcagtggattctcgctgaaggaagttgctattttatcccactttacgaatgagaaaac--agatgcggagaagtcaCCAAGTCAGACTCAAGCGATAGCCCCGTCTCCCTCGGTGACCAGGCTGAAGTAATGAGTAAATGCCACTTGCTCCC-----GATGGCACCGTCACAAGCCCTGAAGCCACCAAGGACCGCTGGGCCTGTGCAGAGGAGAGGCAGACTCAGGGGCT-CCCACCGACAGGACGGCTGTCTTCCAGGCAGGCCTAGCGTCGGAGTCCGCAGGGT---GGGGGTGAGTGTGCAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1284383 326 - 7082604 AGCCTCGGTGCGAACTCCTGGCACACTTTATGTTGGCGGATTCTCGCTGAAGGAACTTGCCACTTCATCCCACTTTACGAACGAGAAAAC------GTGGAGAAGTCACCAAGTCAGACCCAAGCGATAGCCCCGTC-CCCCCAGTGATCAGGCTGAAGTAATGACTAAATGCCACCTGCTCCCGATGAGATGACACCGTCACAAGCCCTGAAGCCACCAAGGACCGCTGGGCCTGTGCAGAGGACAGGCAGACTCAGGCACT-CCCA-CGGCCGGACGGCTGTCTTCCAGGCAGACCTAGAGTGGGAGTCGGCAAGGT---CGGGGTGAGCGCGCAC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1379851 311 + 1864846 agccatggtgctaactcctggcacgctttatgtcggtggattcttgctgagggaagttgctattttatcccactttacgaatgagaaaac------atagagaagtcaCCAAGTCAGACTCGAGCGATAGCCCCGTC-GCCCTGGTGATCAGGCTGAAGTAATGACTAAATGCCACTTGCTCCC-----GATGACACCGTCACAAGCCCTGAAGCCACCAAGGACGGCTGGGCCTGTGCAGAG-----------TCAGGCGCTCCCCACCGACAGGACGGCTGTCTT-CAGGCAGACCTAGCGTGGGAGTCTGCAGGGT---GGGGGTGAGCGTGCAC i cebCap1.NW_016107827v1 C 0 I 135 s aotNan1.NW_018513311v1 198411 329 + 287728 AGCCTCGGTGCTGACTCCTGGTTcactttacgtcggtggattctcgctgaaggaagttgctattttatcccactttacgaatgagaacac--agatgtggagaagtCACCAAGTCAGACTCAAGCGATAGCCCTGTCCCCCTCGGTGATCAGGCTGAAGTAATGACTAAATGCCACTTGCTCCC-----GATGACACCGTCACAAGCCCTGAAGCCACCAAGGACCGCTGGGCCTGTGCAGAGGAGAGGAAGACTCAGGCGCTCCCCACCGACAGGACAGCTGTCTTCCAGGCAAACCTAGCGTCGGAGTCCGCAGGGT--GGGGGGTGAGTGTGCAC i aotNan1.NW_018513311v1 I 11 C 0 a score=34186.000000 s hg38.chr2_KI270774v1_alt 221959 9 + 223625 TGGACTTTG s panTro5.chr2A 1516742 9 + 111504155 TGGACTTTG i panTro5.chr2A C 0 I 16 s panPan2.chr2A 1490159 9 + 114371477 TGGACTTTG i panPan2.chr2A C 0 I 16 s macNem1.NW_012011978v1 1517936 9 + 3644372 TGGCCTTTG i macNem1.NW_012011978v1 C 0 I 122 s cerAty1.NW_012000820v1 1477923 9 - 10304083 TGGCCTTTG i cerAty1.NW_012000820v1 C 0 I 463 s chlSab2.chr14 1550932 9 - 107702431 TGGCCTTTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1053749 9 - 2200435 TGGCCTTTG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1469223 9 - 13651311 TGGCCTTTG i colAng1.NW_012118821v1 C 0 I 1170 s calJac3.chr14 1455768 9 - 108792865 CGGCCTTTC i calJac3.chr14 C 0 I 26 s saiBol1.JH378218 1284709 9 - 7082604 CGGCCTTCC i saiBol1.JH378218 C 0 I 26 s aotNan1.NW_018513311v1 198740 9 + 287728 CGGCCTTTG i aotNan1.NW_018513311v1 C 0 I 4375 e cebCap1.NW_016107827v1 1380162 135 + 1864846 I a score=1029.000000 s hg38.chr2_KI270774v1_alt 221968 2 + 223625 CT s panTro5.chr2A 1516767 2 + 111504155 CT i panTro5.chr2A I 16 C 0 s panPan2.chr2A 1490184 2 + 114371477 CT i panPan2.chr2A I 16 C 0 s chlSab2.chr14 1550941 2 - 107702431 GT i chlSab2.chr14 C 0 I 16 s manLeu1.NW_012103754v1 1053758 2 - 2200435 GT i manLeu1.NW_012103754v1 C 0 I 74 s calJac3.chr14 1455803 2 - 108792865 CC i calJac3.chr14 I 26 C 0 s saiBol1.JH378218 1284744 2 - 7082604 CT i saiBol1.JH378218 I 26 C 0 e aotNan1.NW_018513311v1 198749 4375 + 287728 I e cebCap1.NW_016107827v1 1380162 135 + 1864846 I e colAng1.NW_012118821v1 1469232 1170 - 13651311 I e cerAty1.NW_012000820v1 1477932 463 - 10304083 I e macNem1.NW_012011978v1 1517945 122 + 3644372 I a score=4418.000000 s hg38.chr2_KI270774v1_alt 221970 5 + 223625 GGCGG s panTro5.chr2A 1516769 5 + 111504155 GGCGG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1490186 5 + 114371477 GGCGG i panPan2.chr2A C 0 C 0 s chlSab2.chr14 1550959 5 - 107702431 GGCGC i chlSab2.chr14 I 16 C 0 s calJac3.chr14 1455805 5 - 108792865 GACGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1284746 5 - 7082604 GACGC i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 198749 4375 + 287728 I e cebCap1.NW_016107827v1 1380162 135 + 1864846 I e colAng1.NW_012118821v1 1469232 1170 - 13651311 I e manLeu1.NW_012103754v1 1053760 74 - 2200435 I e cerAty1.NW_012000820v1 1477932 463 - 10304083 I e macNem1.NW_012011978v1 1517945 122 + 3644372 I a score=66565.000000 s hg38.chr2_KI270774v1_alt 221975 26 + 223625 TGCTGGAATGGCTATGCGGAGGGCGC s panTro5.chr2A 1516774 26 + 111504155 TGCTGGAATGGCTGTGCAGAGTGTGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1490191 26 + 114371477 TGCTGGAATGGCTGTGCAGAGTGTGC i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1518067 26 + 3644372 TGCTGGAATGGCTGTGCGGAGTGCGC i macNem1.NW_012011978v1 I 122 C 0 s cerAty1.NW_012000820v1 1478395 26 - 10304083 TGCTGGAATGGCTGTGCGGAGTGCGC i cerAty1.NW_012000820v1 I 463 C 0 s chlSab2.chr14 1550964 26 - 107702431 TGCTGGAATGGCTGTGCGGAGTGCGC i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118821v1 1470402 26 - 13651311 TGCTGGAATGGCTGTGCGGAGTGTGC i colAng1.NW_012118821v1 I 1170 C 0 s calJac3.chr14 1455810 26 - 108792865 TGCTGGGGCGGCTGTGTACAGTGTGT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1284751 26 - 7082604 TGCTGGGGGTGCTGTGCACGGAGTGT i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 198749 4375 + 287728 I e cebCap1.NW_016107827v1 1380162 135 + 1864846 I e manLeu1.NW_012103754v1 1053760 74 - 2200435 I a score=67811.000000 s hg38.chr2_KI270774v1_alt 222001 31 + 223625 TGTGGTGCGGGGACTGCGCTCCCCAGGAGGA s panTro5.chr2A 1516800 31 + 111504155 TATGGTGCTGGGACTGCGCTCCCCAGGAGGA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1490217 31 + 114371477 TATGGTGCTGGGACTGCGCTCCCCAGGAGGA i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1518093 31 + 3644372 TATGGTGCTGGGACTGCGCTTCCCGGGAGGA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1478421 31 - 10304083 TGTGGTGCTGGGACTGCACTCGCCGGGAGGA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1550990 31 - 107702431 TATGGTGCTGGGACTGCGCTCCCCCGGAGGA i chlSab2.chr14 C 0 I 69 s colAng1.NW_012118821v1 1470428 31 - 13651311 TGTGGTGCTGAGACTGTGCTCCCTGGGAGAA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1455836 26 - 108792865 ---GGTGC--TGCCGCTGCTCCCCAGGAGGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1284777 22 - 7082604 ---GAGG------CGCTGCCCCGCGGGAGGA i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 203124 28 + 287728 TGTGGTG---CGACGCCGCTCCCCGCGAGGA i aotNan1.NW_018513311v1 I 4375 C 0 e cebCap1.NW_016107827v1 1380162 135 + 1864846 I e manLeu1.NW_012103754v1 1053760 74 - 2200435 I a score=13085.000000 s hg38.chr2_KI270774v1_alt 222032 13 + 223625 CCTCGGGAGTTGT s panTro5.chr2A 1516831 13 + 111504155 CCTCGGGAGTTGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1490248 13 + 114371477 CCTCGGGAGTTGT i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1518124 13 + 3644372 CTTCGGAAGTTGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1478452 13 - 10304083 CCTCGGAAGTTGT i cerAty1.NW_012000820v1 C 0 C 0 s colAng1.NW_012118821v1 1470459 13 - 13651311 CCTCGGAAGTTGT i colAng1.NW_012118821v1 C 0 I 59 s calJac3.chr14 1455862 9 - 108792865 GCGTGGGAA---- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1284799 9 - 7082604 GCCCGGGAC---- i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 203152 9 + 287728 CCCTGGGAA---- i aotNan1.NW_018513311v1 C 0 C 0 e cebCap1.NW_016107827v1 1380162 135 + 1864846 I e manLeu1.NW_012103754v1 1053760 74 - 2200435 I e chlSab2.chr14 1551021 69 - 107702431 I a score=745.000000 s hg38.chr2_KI270774v1_alt 222045 1 + 223625 T s panTro5.chr2A 1516844 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1490261 1 + 114371477 T i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1518137 1 + 3644372 T i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1478465 1 - 10304083 T i cerAty1.NW_012000820v1 C 0 C 0 s calJac3.chr14 1455871 1 - 108792865 C i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1284808 1 - 7082604 C i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 203161 1 + 287728 C i aotNan1.NW_018513311v1 C 0 C 0 e cebCap1.NW_016107827v1 1380162 135 + 1864846 I e colAng1.NW_012118821v1 1470472 59 - 13651311 I e manLeu1.NW_012103754v1 1053760 74 - 2200435 I e chlSab2.chr14 1551021 69 - 107702431 I a score=9176.000000 s hg38.chr2_KI270774v1_alt 222046 3 + 223625 TGT s panTro5.chr2A 1516845 3 + 111504155 TGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1490262 3 + 114371477 TGT i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1518138 3 + 3644372 TGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1478466 3 - 10304083 TGT i cerAty1.NW_012000820v1 C 0 I 61 s chlSab2.chr14 1551090 3 - 107702431 TGT i chlSab2.chr14 I 69 C 0 s calJac3.chr14 1455872 3 - 108792865 TGT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1284809 3 - 7082604 TGC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 203162 3 + 287728 TGT i aotNan1.NW_018513311v1 C 0 C 0 e cebCap1.NW_016107827v1 1380162 135 + 1864846 I e colAng1.NW_012118821v1 1470472 59 - 13651311 I e manLeu1.NW_012103754v1 1053760 74 - 2200435 I a score=12452.000000 s hg38.chr2_KI270774v1_alt 222049 9 + 223625 TTGTAGGTA s panTro5.chr2A 1516848 5 + 111504155 ----AGGCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1490265 5 + 114371477 ----AGGCA i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1518141 5 + 3644372 ----AGGCA i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1551093 9 - 107702431 TTGTAGGCA i chlSab2.chr14 C 0 C 0 s calJac3.chr14 1455875 9 - 108792865 GTGTAGGCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1284812 9 - 7082604 GTGTGGGCA i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 203165 9 + 287728 GTGTAGGCA i aotNan1.NW_018513311v1 C 0 C 0 e cebCap1.NW_016107827v1 1380162 135 + 1864846 I e colAng1.NW_012118821v1 1470472 59 - 13651311 I e manLeu1.NW_012103754v1 1053760 74 - 2200435 I e cerAty1.NW_012000820v1 1478469 61 - 10304083 I a score=3597.000000 s hg38.chr2_KI270774v1_alt 222058 3 + 223625 TTA s panTro5.chr2A 1516853 3 + 111504155 TTA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1490270 3 + 114371477 TTA i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1518146 3 + 3644372 TTA i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1551102 3 - 107702431 TTA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1053834 3 - 2200435 CTC i manLeu1.NW_012103754v1 I 74 C 0 s calJac3.chr14 1455884 3 - 108792865 TGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1284821 3 - 7082604 TGA i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 203174 3 + 287728 TCA i aotNan1.NW_018513311v1 C 0 C 0 e cebCap1.NW_016107827v1 1380162 135 + 1864846 I e colAng1.NW_012118821v1 1470472 59 - 13651311 I e cerAty1.NW_012000820v1 1478469 61 - 10304083 I a score=7497.000000 s hg38.chr2_KI270774v1_alt 222061 2 + 223625 CA s panTro5.chr2A 1516856 2 + 111504155 CA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1490273 2 + 114371477 CA i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1518149 2 + 3644372 CA i macNem1.NW_012011978v1 C 0 C 0 s chlSab2.chr14 1551105 2 - 107702431 CA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1053837 2 - 2200435 CG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1470531 2 - 13651311 CA i colAng1.NW_012118821v1 I 59 C 0 s calJac3.chr14 1455887 2 - 108792865 CA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1284824 2 - 7082604 CA i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 203177 2 + 287728 CA i aotNan1.NW_018513311v1 C 0 C 0 e cebCap1.NW_016107827v1 1380162 135 + 1864846 I e cerAty1.NW_012000820v1 1478469 61 - 10304083 I a score=42875.000000 s hg38.chr2_KI270774v1_alt 222063 13 + 223625 GTATTGTCTAACG s panTro5.chr2A 1516858 13 + 111504155 GTATTGTCTAACG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1490275 13 + 114371477 GTATTGTCTAACG i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1518151 13 + 3644372 GTCTTGTCTGCCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1478530 13 - 10304083 GTATTGTCTGCCA i cerAty1.NW_012000820v1 I 61 C 0 s chlSab2.chr14 1551107 13 - 107702431 GTATTGTCTGCCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1053839 13 - 2200435 GTATTGTCTGCCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1470533 13 - 13651311 GTATTGTCTGCCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1455889 13 - 108792865 GCGTTGTCCGCCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1284826 13 - 7082604 GCGTTGTCCGCCA i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 203179 13 + 287728 GCGTCGTCCCCCG i aotNan1.NW_018513311v1 C 0 C 0 e cebCap1.NW_016107827v1 1380162 135 + 1864846 I a score=3647205.000000 s hg38.chr2_KI270774v1_alt 222076 808 + 223625 TTGCCGCGTTGACACAGGGTCACGGGAAGCCACCTCCAGGGCCTGTGGTCCTCTT---CAGGCAGGCGGGGCGGGGAATGCTCAGGACCGGTGATGATGGTGCCATGCAGAGTTCAGGGATGAATGACCACCAAGGCAAGGGAAGGAGTCCAGCAGCTCAGTATTTGGGGAATGGGGGCGGGGGCAGGTAAAAACGCAGAATCAAGGGAAACAAACAGCTGGAAAATATAGTAGCTGTTAAGTTCTGATG----GAAAAGCTGTTTTGTACTTACAGTTAAATCCCACAGTAT-TTGTGATGTATTTCCGGGTAACTTGCTCTTCCCTCCTCAAAAGGTCCCAGCCTCACCAGAGCTTCCCTTCCTGCACCGGCCCCAGCTCTCCACGCCTCCCAGAGACCAGGGGGCCTCCACCCTTGCTCCTCTGGGACGGCGCTTCCTCCCCCTCATCTCCAGG-TCGGGGCTGGGGTCTTCAGGCTCAGGTTGAAGATGCTGTTGGGCCCTTTGCCTGTACAGGGATGGCGCCC-GACCCAGGAAAAGCCTAACGTTGTCTGTCATTTGGATGCGTCTCTTGGCAGTGACTGGGG-GGAAATCCTCACTGCAGCCCGCGTCCCTTGCATGATTGTTGTAAGAAAGCCCCAGCTCAGCTGCGTGGAGACAGGGTCCTCTTGGCTGC-AAATTCTAAAATCATTTTTCCTATGAAGAGAGCAGTGCTAATTTTTTCCAAAATATATCAGATTATGATCGACTTGACTGAAGTGTGAAATGAAAGTGGGTTGGAGTGTTCCTGCCAAAGACAAGCACGGCTGCCTTGCC s panTro5.chr2A 1516871 795 + 111504155 TTGCCGCGTTGACACAGGGTCACGGGAAGCCACCTCCAGGGCCTGTGGTCCTCTT---CAGGCAGGCGGGGCGGGGAATGCTCAGGACCGGTGATGATGGTGCCATGCAGAGGTCAGGGATGAATGACCACCAAGGCAAGGGAAGGAGTCCAGCAGCTCAGTATTTGGGGAATGGGGGCGGGGGCAGGTAAAAACGTAGAATCAAGGC-------------GAAAATATAGTAGCTGTTAAGTTCTGATG----GAAAAGCTGTTTTGTACTTACAGTTAAATCCCACAGTAT-TTGTGATGTGTTTCTGGGTAACTTGCTCTTCCCTCCTCAAAAGGTCCCAGCCTCACCAGAGCTTCCCTTCCTGCACCGGCCCGAGCTCTCCATGCCTCCTGGAGACCAGGGGGCCTCTACCCTTGCTCTGCTGGGACGGCGCTTCCTCCCCCTCATCTCCAGT-TCGGGGCTGGGGTCTTCAGGCTCAGGTTGAAGATGGTGTTGGGCCCTTTGCCTGCACAGGGATGGCGCCC-AACCCAGGAAAAGGCTAACGTTGTCTGTCATTTGGATGCGTCTCTTGGCAGTGACTGGGG-GGAAATCCTCACTGCAGCCCGTGTCCCTTGCGTGATTGTTGTAAGAAAGCCCCAGCTCAGCTGCGTGGAGACAGGGTCCTCTTGGCTGC-AAATTCTAAAATCACTTTTCCTATGAAGAGAGCAGTGCTAATTTTTTCCAAAATATATCAGATTACGATCGACTTGACCTAAGTGTGAAATGAAAGTGGGTTGGAGTGTTCCTGCCAAAGACAAGCACGGCCGCCTTGCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1490288 795 + 114371477 TTGCCGCGTTGACACAGGGTCACGGGAAGCCACCTCCAGGGCCTGTGGTCCTCTT---CAGGCAGGCGGGGCAGGGAATGCTCAGGACCGGTGATGATGGTGCCATGCAGAGGTCAGGGATGAATGACCACCAAGGCAAGGGAAGGAGTCCAGCAGCTCAGTATTTGGGGAATGGGGGCGGGGGCAGGTAAAAACGTAGAATCAAGGC-------------GAAAATATAGTAGCTGTTAAGTTCTGATG----GAAAAGCTGTTTTGTACTTACAGTTAAATCCCACAGTAT-TTGTGATGTGTTTCTGGGTAACTTGCTCTTCCCTCCTCAAAAGGTCCCAGCCTCACCAGAGCTTCCCTTCCTGCACCGGCCCGAGCTCTCCATGCCTCCTGGAGACCAGGGGGCCTCTACCCTTGCTCCGCTGGGACGGCGCTTCCTCCCCCTCATCTCCAGT-TCGGGGCTGGGGTCTTCAGGCTCAGGTTGAAGATGGTGTTGGGCCCTTTGCCTGCACAGGGATGGCGCCC-AACCCAGGAAAAGCCGAACGTTGTCTGTCATTTGGATGCGTCTCTTGGCAGTGACTTGGG-GGAAATCCTCACTGCAGCCCGTGTCCCTTGCGTGATTGTTGTAAGAAAGCCCCAGCTCAGCTGCGTGGAGACAGGGTCCTCTTGGCTGC-AAATTCTAAAATCACTTTTCCTATGAAGAGAGCAGTGCTAATTTTTTCCAAAATATATCAGATTACGATCAACTTGACCTAAGTGTGAAATGAAAGTGGGTTGGAGTGTTCCTGCCAAAGACAAGCACGGCCGCCTTGCC i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1518164 801 + 3644372 TTGCCACGTTGACACAGGGTC-----AAGCCACCTCCAGGGCCTGTGTTCCTCTT---CAGGCGGGCGGG--CAGGAATGCTCAGGACCCGTGATGATGGCGCCATGCAGAGGTCAGGGATGAATGA-CGCCCAGGCAGGGGAAGGAGTCCAGCAGCTCAGTGTTTGGGGAATGGGGCCGGGGGCAGGTAAAAACTTCGAATCAAGGCAAACAAATAGCTGGAAAATACAGTAGCTGTTAAGTTCTGATG----GAAAAGCTGTTTTGTACTTACAGTTAAATCCCACAGTAT-TTTTGATGCGTTTCTGGGTTACTTGCTCTTCCCTTCTCAAAAGGTCCCAATCTCACCAGAGCGTCCCTTCCTGCTCCGGCCCCAGCTCTCCACGCCTCCCGGAGACCGGGGG-CCTCTACCCTTGCTCCCCTGGGACGGCGCTTCCCCCCCCTCTTCTCCAGG-TCTGGGCTGGGGTCTTCAGGCTCAGGTGGAAGGTGGTTTCGGGCCCTTTGCCTGCACAGGGACGACGCCCTGACCCAGGAAAAGCTTAACGTTGCCTGTCACTTGGACGCATCTCTTGGCAGTGACGGGGGTGGAAATCCTCACCGCAGCCCGTGTCTCCTGCATGATTGTTGTGAGAAAGTCACCGCTCCGCTGCATGGAGACAGGGTCCTCCTGGCTGCGAAATGCTAAGATCGTTTTCCCTATGAAGAGAACGGTGCCAA-GTTTTCCAAAATGTATCAGATCATGATTGACTTGACTGAAGCGGGAAATGAAAGTGGGTTGGAGCGTTCCTGCCAAAGACAAGCGTGGCCGCCGTGCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1478543 802 - 10304083 TTGCCACGTTGACACAGGGTC-----AAGCCACCTCCAGGGCCTGTGTTCCTCTT---CAGGCAGACAGG--CAGGAATGCTCAGGACCCGTGATGATGGCGCCATGCAGAGGTCAGGGATGAATGACCGCCAAGGCAGGGGAAGGAGTCCAGCACCTCAGTGTTTGGGGAATGGGGCCGGGGGCAGGTAAAAACTTCGAATCAAGGCAAACAAATAGCTGGAAAACACAGTAGCTGTTAAGTTCTGATG----GAAAAGCTGTTTTGTACTTACTGTTAAATCTCACAGTAT-TTTTGATGCGTTTCTGGGTAACTTGCTCTTCCCTTCTCAAAAGGTCCCAGTCTCACCAGAGCGTCCCTTCCTGCTCCGGCCCCAGCTCTCCACGCCTCCCGGAGACCGGGGG-CCTCTACCCTTGCCCCCCTGGGACGGCGCTTCCCCCCGCTCTTCTCCAGG-TCTGGGCTGGGGTCTTCAGGCTCAGGTGGAAGGTGGTTTCGGGCCCTTTGCCTGCACAGGGACGACGCCCTGACCCAGGAAAAGCCTAACGTTGCCTGTCACTTGGACGCATCTCTTGGCAGTGACGGGGGTGGAAATCCTCACCGCAGCCCGTGTCTCCTGCGTGATTGTTGTGAGAAAGCCACCGCCCAGCTGCATGGAGACAGGGTCCTCCTGGCTGCGAAATGCTAAGACCGTTTTCCCTATGAAGAGAACGGTGCCAA-GTTTTCCAAAATGTATCAGATCATGATTGACTTGACTGAAGTGGGAAATGGAAGTGGGTTGGAGTGTTCCTGCCAAAGACAAGCGTGGCCGCCGTGCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1551120 801 - 107702431 TTGCCACGTTGACACAGGGTC-----AAGCCACCTCCAGGGCCTGTGTTCCTCTT---CAGGCAGGCGGG--CAGGAATGCTCAGGACCCGTGATGATGGCGCCATGCAGAGGTCAGGGATGAATGACCGCCAAGGCAGGGGAAGGAGTCCAGCAGCTCAGTGTTTGGGGAATGGGGCCGGGGGCAGGTAAAAACTTCTAATCAAGGCAAACAAATAGCTGGAAATTACAGTAGCTGTTAAGTTCTGATG----GAAAAGCTGTTTTGTACTTACCGTTAAATCCCGCAGTAT-TTTTGATGCGTTTCTGGGTAACTTGCTCTTCCCTTCTTAAAAGGTCCCAGTCTCACCAGAGCGTCCCTTCCTGCTCCGGCCCCAGCTCTCCTCGCCTCCCGGAGACCGGGGG-CCTCTACCCTTGCTGCCCTGGGTCGGCGCTTCCTCCCCCTCTT-TCCAGG-TCTGGGCTGGGGTCTTCAGGCTCAGGTGGAAGGTGGTTTCGGGCCCTTTGCCTGCACAGGGACGACGCCCTGACCCAGGAAAAGCTTAACGTTGCCTGTCACTTGGATGCATCTCTTGGCAGTGACGGGGGTGGAAATCCTCACTGCAGCCCGTGTCTCCTGCGTGATTGTTGTGAGAAAGCCACGGCTCACCTGCATGGAGACAGGGTCCTCCTGGCTGCGAAATGCTAAGATCGTTTTCCCTATGAAGAGAACGGTGCTGA-TTTTTCCAGAATGTATCAGATCATGATTGACTTGACTGAAGTGGGAAATGGAAGTGGGTTGGAGTTTTCCTGCCAAAGACAAGCATGGCCGCCGTGCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1053852 802 - 2200435 TTGCCACGTTGACACAGGGTC-----AAGCCACCTCCAGGGCCTGTGTTCCTCTT---CAGGCAGGCGGG--CAGGAATGCTCAGGACCCGTGATGATGGCGCCATGCAGAGGTCAGGGATGAATGACCGCCAAGGCAGGGGAAGGAGTCCAGCAGCTCAGTGTTTGGGGAATGGGGCCGGGGGCAGGTAAAAACTTCGAATCAAGGCAAACAAATAGCTGGAAATTACAGTAGCTGTTAAGTTCTGATG----GAAAAGCTGTTTTGTACTTACAGTTAAATCCCACAGTAT-TTTTGATGCGTTTCTGGGTAACTTGCTCTTCCCTTCTCAAAAGGTCCCAGTCTCACCAGAGCGTCCCTTCCTGCTCCGGCCCCAGCTCTCCACGCCTCCCGGAGACCGGGGG-CCTCTATCCTTGCTCCCCTGGGACGGCGCTTCCCCCCGCTCTTCTCCAGG-TCTGGGCTGGGGTCTTCAGGCTCAGGTGGAAGGTGGTTTCGGGCCCTCTGCCTGCACAGGGACAACGCCCTGACCCAGGAAAAGCTTAACGTTGCCTGTCACTTGGACGCATCTCTTGGCAGTGACGGGGGTGGAAATCCTCACCGCAGCCCGTGTCTCCTGCGTGATTGTTGTGAGAAAGCCACCGCCCAGCTGCATGGAGACAGGGTCCTCCTGGCTGCGAAATGCTAAGACCGTTTTCCCTATGAAGAGAACGGTGCCAA-GTTTTCCAAAATGTATCAGATCATGATTGACTTGACTGAAGTGGGAAATGGAAGTGGGTTGGAGTGTTCCTGCCAAAGACAAGCGTGGCCGCCGTGCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1470546 798 - 13651311 TTGCCACGTTGACACAGGGTC-----AAGCCACTTCCAGGGCCTGTGTTCCTCCT---CAGGCAGGTGGG--CAGGAATGCTCAGGACCCGTGATGATGGCGCCATGCAGAGGTCAGGGATGAATGACCACCGAGGCAGGGGAAGGAGTCCAGCAGCTCAGTGTTTGGGGAATGAGGCCGGGGGCAGGTAAAAACTTCTAATCAAGGCAACCAAATAGCTGGAAAATATAGTAGCTGTTAAGTTCTGATG----GAAAAGCTGCTTTGTACTTACAGTTAAATCCCGTAGTAT-TTTTGACGCGTTTCTGGGTAACTTGCTCTTCCCTTCTCAAAAGGTCCCAATCTCACCAGAGCATCCCTTCCTGCGCCGGCCCCAGCTCTCCACACCTCCCGGAGACCGGGGGACCTCTACCCTTGCTCCCCTGGGACAGCGCTTCCTCCCCCTCTTCTCTAGG-TCTGGGCTGGGGTCTTCAGGCTCAGGTGAAAGGTGGTTTTGGGCCCTTTGCCTGCACAGGGACAACGCCCTGACCCAGGAAAAGCTTAATGTTGCCTGTCACTTGGATGCATCTCTTGGCAGTGATGGGGGTGGAAATCCTCACTGCAGCCCGTGTCTCCTGCATGATTGTTGTAAGAAAGCCACCGCTCAGCTGCATGGAGACAGGGTCCTCTTGGCTGCGAAATGCCAAAATTCTTTTTCCTATGAAGAGAACAGTGCTAA-TTTTTCTAAAAT-----AGATCATGATTGACTCGACTGAAGTGGAAAATGAAAGTGGATTGGAGTGTTTCTGCCAAAGCCAAGCACGGCCGCTGTGCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1455902 801 - 108792865 TTGCCGCATTGACACGGGACCCTGGAAAGCCACATCCAGGGCCCCTGGTCCTCT----CAGGCAGGTGGG--CGGTAA-GCTCAGCACCCGCGATGATGGCTCCAGGCAGAGGTCAGGGATG-ATGACCCCTGAGGCAAGGGAGGGAGGCCAGACACTCAGTGTTTGGGGAGTGGGGGGTGGGGCAGGTAAACACTTAGAATCGAGGCAAACAAGCAGCTGGAAAGTAGAGTGGCTCTTAGCTTCTGATGGGAAGGAAAGCTGTTTTGTGCCTACGGTTAAATCCCACAGTATTTTTTGGTAAGTTTTTGGATAACTGGTTCTTCCCTCCTCAGAAGGTCCCAGTCTCACCAGAGC-TCCCTTCCCATGCTGGCCCCAGCACTCCATGCCTCCCGGAGGCCAGGGG-CCTCTA-CCTTGCTCCCCTGGGACAGCCCTTCCT-CCGCTCATCTCCAGG-TCTGCCCCGGGGTCTTCACCCTCAGGTGGAAGACGGTGTTGGGCCCTTTGCC-GAGCAGGCATGATGCCC--GACCAGGAAAAGCTAAACACTGTCTGTCATGTGAATGCATCTCCTGGCAGTGACTGGGG-GG-CAACCTCACCGCAGCCCGGGTCTCCTGCATGACTGTTGCAGGAGAGCCGCAGCTCAGCTGCGAGAAGTCAGAGTCCTCTTGGCTGAAAAATGCTAGGATCACTTTTCCTGTGAAGAGAATAGTGCTCA-TTTCTCCAAAATGCATTAGATCATGGTTGACTTGACTGAAGTGTGAAATGAAAGTGGGTGGGAGTGTTTCTGCCGAAGATAAGCACAGCTGCCATGCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1284839 759 - 7082604 TTGCCGCGTTGACACGGGGCCCCGGAAAGCCACGTCCAGGGCCCCTGGTCCTCT----CAGGCAGGCGGG--CGGGAA-GCTCAGCGCCCGCGATGATGGCGCCAGGCAGAGGTCAGGGATG-ATGGCCACCGGGGCAAGCG-GGGAGGCCAGCCACTCAGAATGTGGGCAGCGGGGGGAGAGGCAGGCAG--GCTTAGAATCAAGGCCAGCAAAGAGCTGGAAAACAGAGCGGCTCTTAGGTTCTGACG----GGAAAGCTGCTTTGTGCCTCCAGTTAAACCCCACAGGATTTTTGGATGAGTTTTTGGATAACTGGCTCTTCCCTCCTCACAAAGTCCCAGTCTCAGCAGAGC-TCCCCTCCGGCGCC---------------------------------GG-CCTCGA-CCTTGCTCCCCCGGGACGGCCCTTCTTCCCCCTCGTCCCCAGG-TCTGCGCTGGGGTCTTCACGCTCAGGCGGAAGACGGTGCTGGGCCCTTTGCC-GCACAGGGACGACGCCC--GGCCAGGAGCAGCTGAACGCCGTCTGTCATGTGAATGCGTCTCCCGGCGGTGACGGGGG-GC-CATCCTCACTGCAGCCCCGGTCTCCTGCGTGACTGTTGTAGGAAAGCCACAGCTCAGCTGCGAGGAGACAGAGTCCTCCCGGCTGAAAAACGCT---ATCACTTTTCCTGTGAAGAGAGCAGGGCTGG-TTTCTCCAAAATGCATCAGATCATGGTTGACTTGACTGAAGTGTGAAATGAAAGTGGGCGGGAGTGTTCCTGCCAAAGATGAGCACAGCTGCCGTGCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1380297 794 + 1864846 TTGCCGCGTTGACATGGG-CCCCGGAAAGCCACGTCCAGGGCCCCTGGTCCTCT----CAGGCAGGCGAG--TGGGAA-GCTCCGCACCCGTGATGATGGCTCCAGGCAGAGGTCAGGGATG-ATGACCACTGAGGCACGGGAGGGAGGCCAGCCACTCAGTATGTGGGGAGTGGGGG--TGGGCAGGTAGACACTTAGAACCAAGGCGAACAAACAGCTGGAAAATAGAGTGGCTCTTAGGTTCTGATG----GGAAAGCTGTTTTCTGCCTACAGTTAAATCCCACAGTATTTTTTGATGAGTTTTGGGATAAGTGGCTCTTCCCTCCTCAAAAGGTCCCAGTCCCACCAGAGC-TCCCTTCCTGCGCTGGTGGCAGTGCTCCATGCCTCCCGGGGGCCAGGGG-CCTCCA-CCTTGCTCCTCTGGGACAGCCCGTCCTCCCCTTCGTGTCCAGG-TCTGCGCTGGGGTCTTCACGCTCAGGCGGAAGATGGTGTTGGGCCCTTTGCC-GCACAGGGGTGAGGCCC--GGCCGGGAAAAGCCGAATGC-GTCTGTCACGTGAATGCATC-CCTGGCAGTGACTGGGG-GGACATCCTCACTGCAGCCCGGGTCTCCTGCATGACTGTTGTATGAAAGCCACAGCTCAGCTGCGAGCAGACAGAGTCCTCTCAGCTGAAAAACGCTAAGATCACTTTTCCTATGAAGAGAGCAGTGCTGG-TTTCTCCAAAATGCATTAGGTGGTGGTTGACTTGACTGAAGTGTGAAATGAAAGTGGGTGGAAGTGTTCCTGCCAAAGATGAGCACAGCTGCCGTGCC i cebCap1.NW_016107827v1 I 135 C 0 s aotNan1.NW_018513311v1 203192 802 + 287728 TTGCCGCGTTGACACGGGACCCCGGAAAGCCACGTCCAGGGCCCCTGGTCCTCTcaggcaggcaggcagg--cgggaa-gCTCAGCACCCTCAATGATGGCGCCAGGCAGAGGTCAGGGATG-ATGACCACCAAGGCAAGGGAGGGAGGCCAGACACTCAGCATTTGGGGAGTGGGGGGAGGGGCAGGTAAACACTTAGAATCAAGGCAGACAAACAGCTGGAAAACAGAGAGGCTCTTAGGTTCTGATG----GGAATGCTGTTTTGTGCCTACAGTTAAATCCCACAGTATGTTTTGATGAGTTTTTGGATAACTGCCTCTTCCCTCCTCAAAAGGTCCCAGTCTCACCAGAGC-T-CCTTCCTGCGCCGGCCCCAGCACTCCATGCCCCCCGGAGGCCAGGGG-CCTCTG-CCTCGCTCCCCTGGGACAGCCCTTCCTCCCCGTCATCTCCAGGTTCTGCGCTGGGGTCTTCACGCTCAGGTGGAAGACGGTGTTGGGCCCTTTGCC-GCACAGGGATGACGCCC--GACCAGGAAAAGCTAAACGCTGTCTGTCACGTGAATGCATCTCCTGGCAGTGACTGGGG-GGACATCCTCACAGCAGCCCGGGTCTCCTGCATGACTGTTGTAGGAAAGTCGCAGCTCAGCTGCGAGGAGACAGCGTCCTCTTGGCTGAAAAATGCTAAGATCCCTTTTCCTATGAAGAGAGCAGCGCTAG-TTTCTCC-AAATGCATGAGATCAAGGTTGACTTGACTGAAGTGTGAAATGAAAGTGGGTGGGAGTGTTCCTGCCAAAGATAAGCACAGCTGCCGTGCC i aotNan1.NW_018513311v1 C 0 I 145 a score=40228.000000 s hg38.chr2_KI270774v1_alt 222884 14 + 223625 GTCGCTCGTGCCGT s panTro5.chr2A 1517666 14 + 111504155 GTTGCTCATGCCGC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1491083 14 + 114371477 GTTGCTCATGCCGC i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1518965 14 + 3644372 CTCGCTCATGCCGG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1479345 14 - 10304083 CTCGCTCATGCCGG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1551921 14 - 107702431 CTCGCTCATGCCGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1054654 14 - 2200435 CTCGCTCATGCCGG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1471344 14 - 13651311 CTCGCTCATGCCCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1456703 13 - 108792865 -CGACCCATGCCGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1285598 13 - 7082604 -CGACCCGTGCCGA i saiBol1.JH378218 C 0 I 147 s cebCap1.NW_016107827v1 1381091 13 + 1864846 -CGACCCATGCCGA i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 203994 145 + 287728 I a score=10459.000000 s hg38.chr2_KI270774v1_alt 222898 6 + 223625 GCTCTC s panTro5.chr2A 1517680 6 + 111504155 GCTCCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1491097 6 + 114371477 GCTCCC i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1518979 4 + 3644372 G--CTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1479359 6 - 10304083 GCTCTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1551935 4 - 107702431 G--CTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1054668 4 - 2200435 G--CTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1471358 6 - 13651311 GCTCTC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1456716 6 - 108792865 GTTCTC i calJac3.chr14 C 0 I 2283 s saiBol1.JH378218 1285758 6 - 7082604 GCTCTC i saiBol1.JH378218 I 147 C 0 s cebCap1.NW_016107827v1 1381104 6 + 1864846 GCTCTC i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 203994 145 + 287728 I a score=27633.000000 s hg38.chr2_KI270774v1_alt 222904 7 + 223625 TACCCTC s panTro5.chr2A 1517686 7 + 111504155 TCCCCTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1491103 7 + 114371477 TCCCCTC i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1518983 7 + 3644372 TCCCCTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1479365 7 - 10304083 TCCCCTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1551939 7 - 107702431 TCCCCTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1054672 7 - 2200435 TCCCCTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1471364 7 - 13651311 TCCCCTC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1459005 7 - 108792865 TCCCCTC i calJac3.chr14 I 2283 C 0 s saiBol1.JH378218 1285764 6 - 7082604 -CCCCAA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1381110 6 + 1864846 -TCCCTC i cebCap1.NW_016107827v1 C 0 C 0 e aotNan1.NW_018513311v1 203994 145 + 287728 I a score=152285.000000 s hg38.chr2_KI270774v1_alt 222911 27 + 223625 CACAGTCACGGTGCCGGACCCTCTCCC s panTro5.chr2A 1517693 27 + 111504155 CACAGTCACGGTGCCGGGCCCTCTCCC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1491110 27 + 114371477 CACAGTCACGGTGCCGGGCCCTCTCCC i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1518990 27 + 3644372 CACAGCCACGGTGCCGGGCCCTCTCCC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1479372 27 - 10304083 CACAGTCACGGTGCCGGGCCCTCTCCC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1551946 27 - 107702431 CACAGTCACGGTGCCGGGCCCTCTCCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1054679 27 - 2200435 CACAGTCACGGTGCCGGGCCCTCTCCC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1471371 27 - 13651311 CACAGTCACGGTGCCGGGCCCTCTCCC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1459012 27 - 108792865 CACAGTCATGATGCCGGGATCTCTCCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1285770 27 - 7082604 CACAGTCATGATGCCAGGATCTCTCCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1381116 27 + 1864846 CACAGTCACGATGCCAGGCTCTCTCCC i cebCap1.NW_016107827v1 C 0 I 1581 s aotNan1.NW_018513311v1 204139 27 + 287728 CACAGTCACGATGCCAGGCTCTCTCCC i aotNan1.NW_018513311v1 I 145 C 0 a score=39272.000000 s hg38.chr2_KI270774v1_alt 222938 13 + 223625 GATAACTGGACAC s panTro5.chr2A 1517720 13 + 111504155 GATAACTGGACAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1491137 13 + 114371477 GATAACTGGACAC i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1519017 13 + 3644372 GGTAACTGGACAC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1479399 13 - 10304083 GGTGACTGGACAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1551973 13 - 107702431 CATAGCTGGACAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1054706 13 - 2200435 GGTAACTGGACAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1471398 13 - 13651311 GATAACTGAAGAC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1459039 13 - 108792865 AATAGCCGCACAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1285797 13 - 7082604 AATAACCTCACAT i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 204166 13 + 287728 AATAGCCGCACAT i aotNan1.NW_018513311v1 C 0 C 0 e cebCap1.NW_016107827v1 1381143 1581 + 1864846 I a score=510086.000000 s hg38.chr2_KI270774v1_alt 222951 106 + 223625 GTGTCTCCCACAGGACACGCACTGGCACTAAATCCACACTGCCCATCTCGGAGACAGGCGGAGGAACTCCCGAGCTGAGATGCGGAAAGCACCAGGCCGTAGGGAC s panTro5.chr2A 1517733 106 + 111504155 GTGTCTCCCACAGGACACGCACTGGCACTAAATCCACACTGCCCATCTCGGAGACAGGCGGAGGAACTCCCGAGCTGGGATGCGGGAAGCACCAGGCCATAGGGAC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1491150 106 + 114371477 GTGTCTCCCACAGGACACGCACTGGCACTAAATCCACACTGCCCATCTCGGAGACAGGCGGAGGAACTCCCGAGCTGGGATGCGGGAAGCACCAGGCCATAGGGAC i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1519030 98 + 3644372 GTGTCTCCCGCAGGACACGCGCTGGCACTAAACCCACACTGCCCATCTCGGAGACAGGCGGAGGAACTCCCCGGCTGAGATGCGGGAAGCACCGGGGT-------- i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1479412 106 - 10304083 GTGTCTCCCACAGGACACGCGCTGGCACTAAACCCACACTGCCCATCTCGGAGACAGGCGGAGGAACTCCCCGGCTGAGATGCGGGAAGCACCAGGGTGCAGGGAC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1551986 106 - 107702431 GTGTCTCCCACAGGACACACGCTGGCACTAAACCCGCACTGCCCATCTCGGGGACAGGCAGAGGAACTCCCCAGCTGAGATGCGGGAAGCACCAGGATGCAGGGAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1054719 106 - 2200435 GTGTCTCCCACAGGACACGCGCTGGCACTAAACCCACACTGCCCATCTCGGAGACAGGCGGAGGAACTCCCCGGCTGAGATGCGGGAAGCACCAGGGTGCAGGGAC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1471411 106 - 13651311 ATGTCTCCCACAGGACACGCGCTGGCACTAAACCCACACTGCCCATCTCGGAGACAGGCAGAGGAACTCCCCAGCTGAGATGCGGGAAGCACCAGGATGCAGGGAC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1459052 106 - 108792865 GTGTCTCCCACAGGACAGGTGCTGGCACTAAAGCCACACTGCCCATCTTGGAGACAAGTGGCGTGACTCCCCAGCTGAGATGCAGGAAGCGCCGGGCCATGGGGAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1285810 90 - 7082604 GTGTCTCCCACAGGACAGCTGCTG----------------GCCCATCTTGGAGACAGGCAACGTGACTCCCCAGCTGAGATGCGGGAAGCACCGGGCGGTGGGGAC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1382724 106 + 1864846 GTGTCTCCCACAGGACAGGTGCTGGCACTAAAGCGACACTGCCCATCTTGGAGACAGGCGGCGTGGCTCCCCAGCTGAGACGCAGGAAGCCCCGGGCCGTGGGGAC i cebCap1.NW_016107827v1 I 1581 I 129 s aotNan1.NW_018513311v1 204179 106 + 287728 GTGTCTCCCACAGGACAGGCGGTGGCACTAAAGCCACACTGACCATCGTGGAGACAGGCAGCGTGACTCCCCAGCTGAGATGCCGGAAGCGCCGGGCCATGGGGAC i aotNan1.NW_018513311v1 C 0 I 160 a score=316813.000000 s hg38.chr2_KI270774v1_alt 223057 125 + 223625 CTCACCGCAGCGGGCCGCAGCTCAGGACTCGGAGCAGGTG--------------------GGCCACACCATGCCGCATGTTTCCAGCTGCCACCGCAGTGGTTGGACAGGATCTGGGTGTCGGAGCAGCTCTGCTGGGGCTCCCT s panTro5.chr2A 1517839 125 + 111504155 CTCACCGCAGCGGGCCGCAGCTCAGGACTCGGAGCAGGTG--------------------GGCCACACCATGCCGCATGTTTCCAGCTGCCACCGCAGTGGTTGGGCAGGATCTGGGTGTCGGAGCAGCTCTGCTGGGGCTCCCT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1491256 125 + 114371477 CTCACCGCAGCGGGCCGCAGCTCAGGACTCGGAGCAGGTG--------------------GGCCACACCATGCCGCATGTTTCCAGCTGCCACCGCAGTGGTTGGGCAGGATCTGGGTGTCGGAGCAGCTCTGCTGGGGCTCCCG i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1519128 128 + 3644372 -------------GCCGCAGCTCAGGACTCGGAGCAGGTGG---GCCTGGACCTCCCTA-GGCCACACCACGCCGCATGTTTCCAGCCGCCACCGCAGTGGCTGGACAAGATCTGAGTGTAGGAGCAGCTCCGCCGAGGCTCCCG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1479518 141 - 10304083 TTCACCGCAGGGCGCCGCAGCTCAGGACTCGGAGCAGGTGG---GCCTGGACCTCCCTA-GGCCACACCAGGCCGCATGTTTCCAGCTGCCCCCGCAGTGGTTGGACAAGATCTCAGTGTAGGAGCAGCTCCGCCGAGGCTCCCG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1552092 140 - 107702431 TTCACCGCAGGGCGCCGCAGCTCAGGGCTCGGAGCAGGTGG---GCCTGGACCTCCCTA-GGCCACACCA-CCCGCGTGTTTCCAGCCGCCACCGCAGTGGTTGGGCAAGATCTGAGTGTAGGAGCAGCTCCGCCGAGGCTCCCG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1054825 141 - 2200435 TTCGCCGCAGGGCGCCGCAGCTCAGGACTCGGAGCAGGTGG---GCCTGGACCTCCCTA-GGCCACACCAGGCCGCATGTTTCCAGCTGCCCCCGCAGTGGTTGGACAAGATCTGAGTGTAGGAGCAGCTCCGCCGAGGCTCCCG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1471517 121 - 13651311 TTCACTGCAGGGCACCGCAGCTCA------------------------GGACCTCCCTAGGGCCACACCATGCCGCATGTTCCCAGCTGCCACCGCAGTGGTTGGACAAGATCTGAGTGTAGGAGCAGCTCCGATGAGGGTCCCG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1459158 129 - 108792865 ------------GGCTCAGGCTCAGGACCCGGAACAGTGGG-CAGCCTGGACCTCCCAA-GGCCACACAGTGCCGTGTGTTTCC-ATGGCTGTGGCAGGGGCTGGGCAGGATCCGGGCACTGGAGCCGCTCTGTGGAGGCTCCG- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1285900 124 - 7082604 ------------AGCTCAGGCTCAGGACTTGGAGCAGTGGGCCAGGCTGGACCTCCCTA-GGCCGCACTGTGCCATGTGTTTCT-GTGGCCGTGGCAGGGGCTGGGCAGGAGCTGGGCA------CCGCTCTGTGGAGGGTCCA- i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 204285 160 + 287728 I e cebCap1.NW_016107827v1 1382830 129 + 1864846 I a score=119320.000000 s hg38.chr2_KI270774v1_alt 223182 35 + 223625 GCATATTTCTGTTTACTCCGTGTTTCCTAGTCCGT s panTro5.chr2A 1517964 35 + 111504155 GCATATTTCTGTTTACTCCGTGGTTCCTAGTCTGT i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1491381 35 + 114371477 GCATATTTCTGTTTACTCCGTGGTTCCTAGTCTGT i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1519256 35 + 3644372 GCATATTTCTGTGTACCCCGTGGTTCCCAGTCCGT i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1479659 35 - 10304083 GCACATTTCTGTGTACCCCTTGGTTCTCAGTCCGT i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1552232 35 - 107702431 GCATATTTCTGTGTACCCCTTGGTTTCTAGTCTGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1054966 35 - 2200435 GCACATTTCTGTGTACCCCTTGGTTCTCAGTCCGT i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1471638 35 - 13651311 GCATATTTCTGTTTACCCCTTGGTTCCTCGTCCAT i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1459287 34 - 108792865 GCATATTTCTGTTTACTCTGTGGCTC-TGGCCCGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1286024 34 - 7082604 GCATATTTCTGTTTACTCCATGGCTG-TGGCCCGA i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1382959 34 + 1864846 GCATATTTCTGTTTACTCTGTGGCTC-TGGCCCGA i cebCap1.NW_016107827v1 I 129 C 0 e aotNan1.NW_018513311v1 204285 160 + 287728 I a score=221669.000000 s hg38.chr2_KI270774v1_alt 223217 48 + 223625 TCTGCACCTTCCTCCGGGAGGTTTTATT-----------------T---------ACAAGCTAATGACAGTGAG s panTro5.chr2A 1517999 48 + 111504155 TCTGCACCTTCCTCCGGGAGGTTTTATT-----------------T---------ACAAGCTAATGACAACGAG i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1491416 48 + 114371477 TCTGCACCTTCCTCCGGGAGGTTTTATT-----------------T---------ACAAGCTAATGACAATGAG i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1519291 48 + 3644372 TCTGCACTTTCGTCCTGGAGGTTTTATT-----------------T---------ACAAGTTAATGACAATGAG i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1479694 48 - 10304083 TCTGCACTTTCGTCCTGGAGGTTTTATT-----------------T---------ACAAGTTAATGACAATGAG i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1552267 48 - 107702431 TCTGCACTTTCATCCTGGAGGTTTTATT-----------------T---------ACAAGTTAATGACAATGAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1055001 48 - 2200435 TCTGCACTTTCGTCCTGGAGGTTTTATT-----------------T---------ACAAGTTAATGACAATGAG i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1471673 57 - 13651311 TCTGCACTTTCGTCCTGGAGGTTTTATA-----------------TACAAGTTAAACAAGTTAATGACAATGAG i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1459321 60 - 108792865 TCTGCACCTTCCTTCTG-----TTTACTCTGTGGCTCTGGCCCGAT---------CTGCGCTAATGACAGTGAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1286058 48 - 7082604 TCTGCACCTTCCTCCTGGAGGTTTTACT-----------------T---------ACAAGCTAATGACAGTGAG i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1382993 48 + 1864846 TCTGCACCTTCCTCCTGGAGGTTTTACT-----------------T---------ACAAGCTAAGGACAGTGAG i cebCap1.NW_016107827v1 C 0 I 94 s aotNan1.NW_018513311v1 204445 48 + 287728 TCTGTACCTTCCTCCTGGAGGTTTTACT-----------------T---------ACGAGCCAATGACAGTGAG i aotNan1.NW_018513311v1 I 160 C 0 a score=1624.000000 s hg38.chr2_KI270774v1_alt 223265 5 + 223625 CCAG-A s panTro5.chr2A 1518047 5 + 111504155 CCAG-A i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1491464 5 + 114371477 CCAG-A i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1519339 5 + 3644372 CCAG-A i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1479742 5 - 10304083 CCAG-A i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1552315 5 - 107702431 CGAG-A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1055049 5 - 2200435 CCAG-A i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1471730 5 - 13651311 CCAG-A i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1459381 4 - 108792865 TCAG-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1286106 4 - 7082604 TTGG-- i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 204493 5 + 287728 TCAGA- i aotNan1.NW_018513311v1 C 0 I 72 e cebCap1.NW_016107827v1 1383041 94 + 1864846 I a score=182187.000000 s hg38.chr2_KI270774v1_alt 223270 59 + 223625 ATGTGAGCCTGCTT-----------------AGTGAGAGGAATGAAGATGCCTTCCATTTGTACAAACCGGTTCCA s panTro5.chr2A 1518052 59 + 111504155 ATGTGAGCCTGCTT-----------------AGTGAGAGGAATGAAAATGCCTTCCATTTGTACAAACCGGTTCCA i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1491469 59 + 114371477 ATGTGAGCCTGCTT-----------------AGTGAGAGGAATGAAAATGCCTTCCATTTGTACAAACCGGTTCCA i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1519344 59 + 3644372 ATGTGAGCCTGCTT-----------------AGTGAGAGGAAGGAAAATGCCTTCCGTTTGTACAAACCGGTTCCA i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1479747 59 - 10304083 ATGTGAGCCTGCTT-----------------AGTGAGAGGAAGGAAAATGCCTTCCGTTTGTACAAACCGGTTCCA i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1552320 59 - 107702431 ATGTGAGCCTGCTT-----------------AGTGAGAGGAAGGAAAATGCCTTCCGTTTGTACAAACCGGTTCCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1055054 59 - 2200435 ATGTGAGCCTGCTT-----------------AGTGAGAGGAAGGAAAATGCCTTCCGTTTGTACAAACCGGTTCCA i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1471735 59 - 13651311 ATGTGAGCCTGCTC-----------------AGTGAGAGGAGGGAAAATGCCTTCCATTGCTACAAACCGGTTCCA i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1459385 73 - 108792865 ATGTGAACCTGCTTTCCAAAAGCACAGACACAGTGACAGGAATGAAAGTGCCTGCA--TTTTACAAACCGGTTCC- i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1286110 73 - 7082604 ATGTGAACCTGCTTTCCAAAAGCACACACAGAGGGACAGGAGTGAAAGTGCCCCCA--TCATATAAACCAGTTCC- i saiBol1.JH378218 C 0 C 0 e aotNan1.NW_018513311v1 204498 72 + 287728 I e cebCap1.NW_016107827v1 1383041 94 + 1864846 I a score=83809.000000 s hg38.chr2_KI270774v1_alt 223329 19 + 223625 AAACTAAGGGCTCACTTTC s panTro5.chr2A 1518111 19 + 111504155 AAACTAAGGGCTGACTTTC i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1491528 19 + 114371477 AAACTAAGGGCTGACTTTC i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1519403 19 + 3644372 AAACTAAGGGCTGACTTTC i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1479806 19 - 10304083 AAACTAAGGGCTGACTTTC i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1552379 19 - 107702431 AAACTAAGGGCTGCCTTTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1055113 19 - 2200435 AAACTAAGGGCTGACTTTC i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1471794 19 - 13651311 AAACTAGGGACTGATTTTC i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1459458 19 - 108792865 AAACTAAGGGCTGCCTTTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1286183 19 - 7082604 AAAGTAAGGGCTGCCTTTC i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 204570 19 + 287728 AAACTGAGGGCTGCCTTTC i aotNan1.NW_018513311v1 I 72 C 0 e cebCap1.NW_016107827v1 1383041 94 + 1864846 I a score=1121622.000000 s hg38.chr2_KI270774v1_alt 223348 251 + 223625 AGGCGTTTGCTTCCACTTAATCTGAGGATCGGCTGGAAGCACAGGAGAGGAAGGAGAAGCTGAAGCAAAACCCTGACTTTTAAATTCTGATTTTTAAGTGGAATAGTTATAATCAGTGTGG-AAAAATGTGTATGTTTATGTTTTACC-CCCTTACCTTGTATGCAGAACCCCAAGGGAGGCCATATCAAAAACTCACTTGTGTAAGTCTGACTTttgaactgagagaagcagagagcagaacagtggcctcc s panTro5.chr2A 1518130 251 + 111504155 AGGCGTTTGCTTCCACTTAATCTGAGGATCCGCTGGAAGGACAGGAGAGGAAGGAGAAGCTGAAGCAAAACCCTGACTTTTAAATTCTGATTTTTAAGTGGAATAGTTATAATCAGTGTGG-AAAAATGTGTATGTTTATGTTTTACC-CCCTTACCTCGTATGCAGAACCCCAAGGGAGGCCATATCAAAAACTCACTTGTGTAAGTCTGACTTttgaactgagagaagcagagagcagaacagcggcctcc i panTro5.chr2A C 0 C 0 s panPan2.chr2A 1491547 251 + 114371477 AGGCGTTTGCTTCCACTTAATCTGAGGATCCGCTGGAAGGACAGGAGAGGAAGGAGAAGCTGAAGCAAAACCCTGACTTTTAAATTCTGATTTTTAAGTGGAATAGTTATAATCAGTGTGG-AAAAATGTGTATGTTTATGTTTTACC-CCCTTACCTCGTATGCAGAACCCCAAGGGAGGCCATATCAAAAACTCACTTGTGTAAGTCTGACTTttgaactgagagaagcagagagcagaacagcggcctcc i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1519422 244 + 3644372 AGGCGTTGGCTTCCACTTATTCTGAGGACTGGCTGGAAGCGCAGGAGAGGAAGGAAAAGCTGAAACAAAATGCTGACTTTTAAATTCTGATTTTTAAGTGGAATCGTTATAACCAGTATGG-AAAAATGTT------TATGTTTTACCAACTTCACCTTGTATGCAGAACCCCAAGTGAGGGCGTATTAAAAAGTCACTTGTGTAAGT--GACTgttgaacttagagaagcagagagcagcacagtggactcc i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1479825 244 - 10304083 AGGCGTTGGCTTCCACTTATTCTGAGGACTGGCTGGAAGCGCAGGAGAGGAAGGAGAAGCTGAAACAAAATGCTGACTTTTAAATTCTGATTTTTAAGTGGAATCGTTATAACCAGTGCGG-AAAAATGTT------TGTGTTTTACCAACTTTACCTTGTATGCAGCACCCCAAGTGAGGGCGTATTAAAAAGTCACTTGTGTAATT--GACTgttgaacttagagaagcagagagcagcacagtggcctcc i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1552398 244 - 107702431 AGGTGTTCGCTTCCACTTATTCTGAGGACTGGCTGGAAGCACAGGAGAGGAAGGAGAAGCTGAAACAAAATGCTGACTTTTAAGTTCTGATTTTTCAGTGGAATCGTTATAACCAGTGCGG-AAAAATGTT------TATGTTTTACCAACTTGACCTTGTATGCAGAACCCCAAGTGAGGGCGTATTAAAAAGTCACTTGTGTAAGT--GACTgttgaacttagagaagcagagagcagcacagtggcctcc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1055132 244 - 2200435 AGGCGTTGGCTTCCACTTATTCTGAGGACTGGCTGGAAGCGCAGGAGAGGAAGGAGAAGCTGAAACAAAATGCTGACTTTTAAATTCTGATTTTTAAGTGGAATCGTTATAACCAGTATGG-AAAAATGTT------TATGTTTTACCAACTTTACCTTGTATGCAGCACCCCAAGTGAGGGCGTATTAAAAAGTCACTTGTGTAAGT--GACTgttgaacttagagaagcagagagcagcacagtggcctcc i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1471813 252 - 13651311 AGGCGTTGGCTTCCACTTATTCTGAGGACTGGCTGGAAGCCCAGGAGAGGAAGGAGAAGCTGAAACAAAATGCTGACTTTTAAATTCTGATTTTTAAGTGGAATCGTTATAATCAGTGCGG-AAAAATGTTTACATGTATGTTTTACCAACTTTACCTTGTACGCAGAACCCCAAGTGAGGCCGTAGTAAAAAGTCACCTGTGTAAGTTGGACCgtcgagcttagagaagcagagagcagaacagtggcctcc i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1459477 222 - 108792865 AGGCGTCT-----------------------GCTGTGAGCACAGGAGAGGAGGGAGAAGCTGACGCAGAATGCTGACTTTTGAATTCTGATTTTCAAGTGGAATAGTTAAAATCAGTGTGGAAAAAGAG--------TGTGTTTTGCCACCTCTACCTTGTATGCAGAGCCCCAAGTGATGCCACATGAAAAAGTCACTTGTGTAAGTTTGACCTTTGAACTTAGAGAAGCAGAGAGCAGAACAGGGGACTCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1286202 242 - 7082604 AGGCCTCTGCTTCCACTTAGCCTGAGGATTGGCTGTGAGCACAGGAGAGGA--GAGAAGCTGACACAAAGTGCTGACTTTTAAATTCTAACTTTTAAGTGGAATACTTATCATCAGTGTGG-AAAAGTG--------TATGTTTTGCCACCTCTACCTTGTATGCAGAACCCCAAGTGATGCCATATGAAAAAGTCACTTGCGTAAGTTTGACTTTTGAACTTAGAGAAGCAGAGAGCAGAACAGGGGCCTCC i saiBol1.JH378218 C 0 C 0 s cebCap1.NW_016107827v1 1383135 243 + 1864846 AGGCGTCTGCGTCCACTTAACCTGAGGAGTGGCTGTGAGCACAGGAGAGAG-GGAGAAGCTCACACAAAGTGCTGACTTTTAAATTCTAACTTTTGAGTGGAATGCTTATCATCAGTGTGG-AAAAGTG--------TGCGTTTTGCCGCCTCTACCTTGTATGCAGAACCCCAAGTGATGCCATATGAAAAAGTCACTTGCGTAAGTTTGACTTTTGAACTTAGAGAAGCAGAGAGCAGAACAGGGGCCTCC i cebCap1.NW_016107827v1 I 94 N 0 s aotNan1.NW_018513311v1 204589 244 + 287728 AGGCGTCTGCTTCCACTTCATCTGAGGATTGGCTGTGAGCACAGGAGAGGAGGGAGAAGCTGACACAGAATGCTGACTTTTGAATTCTGATTTTT-AGTGGAATAGTTATAATCAGCGTGGAAAAAGTG--------TGTGTTTTCCCACCTCTACCTCGTATGCAGATCCCCAAGTGATGCCATATGAAAAAGTCACTTGCGTAAGTTTGACTTttgaacttacagaagcagagggcagaagagcggcctcc i aotNan1.NW_018513311v1 C 0 C 0 a score=38898.000000 s hg38.chr2_KI270774v1_alt 223599 9 + 223625 agaggggag s panTro5.chr2A 1518381 9 + 111504155 agaggggag i panTro5.chr2A C 0 N 0 s panPan2.chr2A 1491798 9 + 114371477 agaggggag i panPan2.chr2A C 0 C 0 s macNem1.NW_012011978v1 1519666 9 + 3644372 agagggcag i macNem1.NW_012011978v1 C 0 C 0 s cerAty1.NW_012000820v1 1480069 9 - 10304083 agagggcaa i cerAty1.NW_012000820v1 C 0 C 0 s chlSab2.chr14 1552642 9 - 107702431 agagggcag i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012103754v1 1055376 9 - 2200435 agagggcaa i manLeu1.NW_012103754v1 C 0 C 0 s colAng1.NW_012118821v1 1472065 9 - 13651311 agagggcag i colAng1.NW_012118821v1 C 0 C 0 s calJac3.chr14 1459699 9 - 108792865 AGAGGGGAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378218 1286444 9 - 7082604 AGAGGGGAG i saiBol1.JH378218 C 0 C 0 s aotNan1.NW_018513311v1 204833 9 + 287728 agaggggag i aotNan1.NW_018513311v1 C 0 C 0 a score=53839.000000 s hg38.chr2_KI270774v1_alt 223608 17 + 223625 tggggaggtgctggtca s panPan2.chr2A 1491807 17 + 114371477 tggggaggtgctggtca i panPan2.chr2A C 0 N 0 s macNem1.NW_012011978v1 1519675 17 + 3644372 tggggagatgctggtca i macNem1.NW_012011978v1 C 0 N 0 s cerAty1.NW_012000820v1 1480078 17 - 10304083 tggggagatgctggtca i cerAty1.NW_012000820v1 C 0 N 0 s chlSab2.chr14 1552651 17 - 107702431 tggggagatgccggtca i chlSab2.chr14 C 0 N 0 s manLeu1.NW_012103754v1 1055385 17 - 2200435 tggggagatgctggtca i manLeu1.NW_012103754v1 C 0 N 0 s colAng1.NW_012118821v1 1472074 17 - 13651311 tggggagatgctggtca i colAng1.NW_012118821v1 C 0 N 0 s calJac3.chr14 1459708 16 - 108792865 -GGGCAGAGGCTGGTCA i calJac3.chr14 C 0 N 0 s saiBol1.JH378218 1286453 15 - 7082604 -GCG-GGAGGCTGGTCA i saiBol1.JH378218 C 0 N 0 s aotNan1.NW_018513311v1 204842 16 + 287728 -ggggagaggctggtca i aotNan1.NW_018513311v1 C 0 N 0